##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM3031656v1 #!genome-build-accession NCBI_Assembly:GCA_030316565.1 #!annotation-date 02/14/2023 14:42:07 #!annotation-source NCBI ##sequence-region CP118128.1 1 4658261 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=594 CP118128.1 Genbank region 1 4658261 . + . ID=CP118128.1:1..4658261;Dbxref=taxon:594;Is_circular=true;Name=ANONYMOUS;collection-date=2017-08-21;country=South Africa: North West;gbkey=Src;genome=chromosome;mol_type=genomic DNA;nat-host=Gallus gallus domesticus;serovar=Gallinarum;strain=ZA_445509;sub-species=enterica CP118128.1 Genbank gene 80 145 . + . ID=gene-PUW31_00005;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=PUW31_00005 CP118128.1 Protein Homology CDS 80 145 . + 0 ID=cds-WJH10817.1;Parent=gene-PUW31_00005;Dbxref=NCBI_GP:WJH10817.1;Name=WJH10817.1;Ontology_term=GO:0031554,GO:0031556;gbkey=CDS;gene=thrL;go_process=regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459006.1;locus_tag=PUW31_00005;product=thr operon leader peptide;protein_id=WJH10817.1;transl_table=11 CP118128.1 cmsearch sequence_feature 81 201 . + . ID=id-CP118128.1:81..201;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 CP118128.1 Genbank gene 227 2689 . + . ID=gene-PUW31_00010;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=PUW31_00010 CP118128.1 Protein Homology CDS 227 2689 . + 0 ID=cds-WJH08765.1;Parent=gene-PUW31_00010;Dbxref=NCBI_GP:WJH08765.1;Name=WJH08765.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=PUW31_00010;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WJH08765.1;transl_table=11 CP118128.1 Genbank gene 2691 3620 . + . ID=gene-PUW31_00015;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=PUW31_00015 CP118128.1 Protein Homology CDS 2691 3620 . + 0 ID=cds-WJH08766.1;Parent=gene-PUW31_00015;Dbxref=NCBI_GP:WJH08766.1;Name=WJH08766.1;Ontology_term=GO:0009088,GO:0004413;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459008.1;locus_tag=PUW31_00015;product=homoserine kinase;protein_id=WJH08766.1;transl_table=11 CP118128.1 Genbank gene 3624 4910 . + . ID=gene-PUW31_00020;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=PUW31_00020 CP118128.1 Protein Homology CDS 3624 4910 . + 0 ID=cds-WJH08767.1;Parent=gene-PUW31_00020;Dbxref=NCBI_GP:WJH08767.1;Name=WJH08767.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459009.1;locus_tag=PUW31_00020;product=threonine synthase;protein_id=WJH08767.1;transl_table=11 CP118128.1 Genbank gene 5004 5777 . - . ID=gene-PUW31_00025;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=PUW31_00025 CP118128.1 Protein Homology CDS 5004 5777 . - 0 ID=cds-WJH08768.1;Parent=gene-PUW31_00025;Dbxref=NCBI_GP:WJH08768.1;Name=WJH08768.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459010.1;locus_tag=PUW31_00025;product=peroxide stress protein YaaA;protein_id=WJH08768.1;transl_table=11 CP118128.1 Genbank gene 5856 7286 . - . ID=gene-PUW31_00030;Name=PUW31_00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00030 CP118128.1 Protein Homology CDS 5856 7286 . - 0 ID=cds-WJH08769.1;Parent=gene-PUW31_00030;Dbxref=NCBI_GP:WJH08769.1;Name=WJH08769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459011.1;locus_tag=PUW31_00030;product=sodium:alanine symporter family protein;protein_id=WJH08769.1;transl_table=11 CP118128.1 Genbank gene 7555 8508 . + . ID=gene-PUW31_00035;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=PUW31_00035 CP118128.1 Protein Homology CDS 7555 8508 . + 0 ID=cds-WJH08770.1;Parent=gene-PUW31_00035;Dbxref=NCBI_GP:WJH08770.1;Name=WJH08770.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;gene=tal;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459012.1;locus_tag=PUW31_00035;product=transaldolase;protein_id=WJH08770.1;transl_table=11 CP118128.1 Genbank gene 8619 9209 . + . ID=gene-PUW31_00040;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=PUW31_00040 CP118128.1 Protein Homology CDS 8619 9209 . + 0 ID=cds-WJH08771.1;Parent=gene-PUW31_00040;Dbxref=NCBI_GP:WJH08771.1;Name=WJH08771.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380375.1;locus_tag=PUW31_00040;product=molybdopterin adenylyltransferase;protein_id=WJH08771.1;transl_table=11 CP118128.1 Genbank gene 9266 9832 . - . ID=gene-PUW31_00045;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=PUW31_00045 CP118128.1 Protein Homology CDS 9266 9832 . - 0 ID=cds-WJH08772.1;Parent=gene-PUW31_00045;Dbxref=NCBI_GP:WJH08772.1;Name=WJH08772.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459014.1;locus_tag=PUW31_00045;product=acetate uptake transporter;protein_id=WJH08772.1;transl_table=11 CP118128.1 Genbank pseudogene 9982 10695 . - . ID=gene-PUW31_00050;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=pseudogene;locus_tag=PUW31_00050;pseudo=true CP118128.1 Protein Homology CDS 9982 10695 . - 0 ID=cds-PUW31_00050;Parent=gene-PUW31_00050;Note=internal stop;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459015.1;locus_tag=PUW31_00050;product=acidic protein MsyB;pseudo=true;transl_table=11 CP118128.1 Genbank gene 10731 11135 . - . ID=gene-PUW31_00055;Name=PUW31_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00055 CP118128.1 Protein Homology CDS 10731 11135 . - 0 ID=cds-WJH08773.1;Parent=gene-PUW31_00055;Dbxref=NCBI_GP:WJH08773.1;Name=WJH08773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459016.1;locus_tag=PUW31_00055;product=DUF2541 family protein;protein_id=WJH08773.1;transl_table=11 CP118128.1 Genbank gene 11483 13399 . + . ID=gene-PUW31_00060;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=PUW31_00060 CP118128.1 Protein Homology CDS 11483 13399 . + 0 ID=cds-WJH08774.1;Parent=gene-PUW31_00060;Dbxref=NCBI_GP:WJH08774.1;Name=WJH08774.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=PUW31_00060;product=molecular chaperone DnaK;protein_id=WJH08774.1;transl_table=11 CP118128.1 Genbank gene 13485 14624 . + . ID=gene-PUW31_00065;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=PUW31_00065 CP118128.1 Protein Homology CDS 13485 14624 . + 0 ID=cds-WJH08775.1;Parent=gene-PUW31_00065;Dbxref=NCBI_GP:WJH08775.1;Name=WJH08775.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459018.1;locus_tag=PUW31_00065;product=molecular chaperone DnaJ;protein_id=WJH08775.1;transl_table=11 CP118128.1 Genbank gene 14905 15852 . + . ID=gene-PUW31_00070;Name=PUW31_00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00070 CP118128.1 Protein Homology CDS 14905 15852 . + 0 ID=cds-WJH08776.1;Parent=gene-PUW31_00070;Dbxref=NCBI_GP:WJH08776.1;Name=WJH08776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459019.1;locus_tag=PUW31_00070;product=LysR family transcriptional regulator;protein_id=WJH08776.1;transl_table=11 CP118128.1 Genbank gene 15979 16323 . + . ID=gene-PUW31_00075;Name=PUW31_00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00075 CP118128.1 Protein Homology CDS 15979 16323 . + 0 ID=cds-WJH08777.1;Parent=gene-PUW31_00075;Dbxref=NCBI_GP:WJH08777.1;Name=WJH08777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459020.1;locus_tag=PUW31_00075;product=phage holin family protein;protein_id=WJH08777.1;transl_table=11 CP118128.1 Genbank gene 16384 16917 . - . ID=gene-PUW31_00080;Name=PUW31_00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00080 CP118128.1 Protein Homology CDS 16384 16917 . - 0 ID=cds-WJH08778.1;Parent=gene-PUW31_00080;Dbxref=NCBI_GP:WJH08778.1;Name=WJH08778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459021.1;locus_tag=PUW31_00080;product=glycoside hydrolase family 108 protein;protein_id=WJH08778.1;transl_table=11 CP118128.1 Genbank gene 16934 17377 . - . ID=gene-PUW31_00085;Name=PUW31_00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00085 CP118128.1 Protein Homology CDS 16934 17377 . - 0 ID=cds-WJH08779.1;Parent=gene-PUW31_00085;Dbxref=NCBI_GP:WJH08779.1;Name=WJH08779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459022.1;locus_tag=PUW31_00085;product=transcriptional regulator;protein_id=WJH08779.1;transl_table=11 CP118128.1 Genbank pseudogene 17758 19854 . + . ID=gene-PUW31_00090;Name=PUW31_00090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_00090;pseudo=true CP118128.1 Protein Homology CDS 17758 19854 . + 0 ID=cds-PUW31_00090;Parent=gene-PUW31_00090;Note=frameshifted;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459023.1;locus_tag=PUW31_00090;product=glycosyl hydrolase family 18 protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 19946 22942 . + . ID=gene-PUW31_00095;Name=PUW31_00095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_00095;pseudo=true CP118128.1 Protein Homology CDS 19946 22942 . + 0 ID=cds-PUW31_00095;Parent=gene-PUW31_00095;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459024.1;locus_tag=PUW31_00095;product=chitinase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 23222 23926 . + . ID=gene-PUW31_00100;Name=PUW31_00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00100 CP118128.1 Protein Homology CDS 23222 23926 . + 0 ID=cds-WJH08780.1;Parent=gene-PUW31_00100;Dbxref=NCBI_GP:WJH08780.1;Name=WJH08780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459025.1;locus_tag=PUW31_00100;product=helix-turn-helix domain-containing protein;protein_id=WJH08780.1;transl_table=11 CP118128.1 Genbank gene 24356 24898 . + . ID=gene-PUW31_00105;Name=PUW31_00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00105 CP118128.1 Protein Homology CDS 24356 24898 . + 0 ID=cds-WJH08781.1;Parent=gene-PUW31_00105;Dbxref=NCBI_GP:WJH08781.1;Name=WJH08781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459026.1;locus_tag=PUW31_00105;product=fimbrial protein BcfA;protein_id=WJH08781.1;transl_table=11 CP118128.1 Genbank gene 24999 25685 . + . ID=gene-PUW31_00110;Name=bcfB;gbkey=Gene;gene=bcfB;gene_biotype=protein_coding;locus_tag=PUW31_00110 CP118128.1 Protein Homology CDS 24999 25685 . + 0 ID=cds-WJH08782.1;Parent=gene-PUW31_00110;Dbxref=NCBI_GP:WJH08782.1;Name=WJH08782.1;gbkey=CDS;gene=bcfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459027.1;locus_tag=PUW31_00110;product=fimbrial biogenesis chaperone BcfB;protein_id=WJH08782.1;transl_table=11 CP118128.1 Genbank gene 25690 28311 . + . ID=gene-PUW31_00115;Name=bcfC;gbkey=Gene;gene=bcfC;gene_biotype=protein_coding;locus_tag=PUW31_00115 CP118128.1 Protein Homology CDS 25690 28311 . + 0 ID=cds-WJH08783.1;Parent=gene-PUW31_00115;Dbxref=NCBI_GP:WJH08783.1;Name=WJH08783.1;gbkey=CDS;gene=bcfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459028.1;locus_tag=PUW31_00115;product=fimbrial usher BcfC;protein_id=WJH08783.1;transl_table=11 CP118128.1 Genbank gene 28312 29319 . + . ID=gene-PUW31_00120;Name=PUW31_00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00120 CP118128.1 Protein Homology CDS 28312 29319 . + 0 ID=cds-WJH08784.1;Parent=gene-PUW31_00120;Dbxref=NCBI_GP:WJH08784.1;Name=WJH08784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459029.1;locus_tag=PUW31_00120;product=fimbrial protein BcfD;protein_id=WJH08784.1;transl_table=11 CP118128.1 Genbank gene 29320 29865 . + . ID=gene-PUW31_00125;Name=PUW31_00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00125 CP118128.1 Protein Homology CDS 29320 29865 . + 0 ID=cds-WJH08785.1;Parent=gene-PUW31_00125;Dbxref=NCBI_GP:WJH08785.1;Name=WJH08785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459030.1;locus_tag=PUW31_00125;product=fimbrial protein BcfE;protein_id=WJH08785.1;transl_table=11 CP118128.1 Genbank gene 29881 30399 . + . ID=gene-PUW31_00130;Name=PUW31_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00130 CP118128.1 Protein Homology CDS 29881 30399 . + 0 ID=cds-WJH08786.1;Parent=gene-PUW31_00130;Dbxref=NCBI_GP:WJH08786.1;Name=WJH08786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459031.1;locus_tag=PUW31_00130;product=fimbrial protein BcfF;protein_id=WJH08786.1;transl_table=11 CP118128.1 Genbank gene 30365 31096 . + . ID=gene-PUW31_00135;Name=bcfG;gbkey=Gene;gene=bcfG;gene_biotype=protein_coding;locus_tag=PUW31_00135 CP118128.1 Protein Homology CDS 30365 31096 . + 0 ID=cds-WJH08787.1;Parent=gene-PUW31_00135;Dbxref=NCBI_GP:WJH08787.1;Name=WJH08787.1;gbkey=CDS;gene=bcfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459032.1;locus_tag=PUW31_00135;product=fimbrial chaperone BcfG;protein_id=WJH08787.1;transl_table=11 CP118128.1 Genbank pseudogene 31160 32003 . + . ID=gene-PUW31_00140;Name=PUW31_00140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_00140;pseudo=true CP118128.1 Protein Homology CDS 31160 32003 . + 0 ID=cds-PUW31_00140;Parent=gene-PUW31_00140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459033.1;locus_tag=PUW31_00140;product=DsbA family protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 32042 32329 . + . ID=gene-PUW31_00145;Name=PUW31_00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00145 CP118128.1 Protein Homology CDS 32042 32329 . + 0 ID=cds-WJH08788.1;Parent=gene-PUW31_00145;Dbxref=NCBI_GP:WJH08788.1;Name=WJH08788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000839835.1;locus_tag=PUW31_00145;product=hypothetical protein;protein_id=WJH08788.1;transl_table=11 CP118128.1 Genbank gene 32429 32878 . - . ID=gene-PUW31_00150;Name=PUW31_00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00150 CP118128.1 Protein Homology CDS 32429 32878 . - 0 ID=cds-WJH08789.1;Parent=gene-PUW31_00150;Dbxref=NCBI_GP:WJH08789.1;Name=WJH08789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459034.1;locus_tag=PUW31_00150;product=transcriptional regulator;protein_id=WJH08789.1;transl_table=11 CP118128.1 Genbank gene 33248 34252 . + . ID=gene-PUW31_00155;Name=PUW31_00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00155 CP118128.1 Protein Homology CDS 33248 34252 . + 0 ID=cds-WJH08790.1;Parent=gene-PUW31_00155;Dbxref=NCBI_GP:WJH08790.1;Name=WJH08790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459035.1;locus_tag=PUW31_00155;product=LysR family transcriptional regulator;protein_id=WJH08790.1;transl_table=11 CP118128.1 Genbank pseudogene 34260 34699 . - . ID=gene-PUW31_00160;Name=PUW31_00160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_00160;pseudo=true CP118128.1 Protein Homology CDS 34260 34699 . - 0 ID=cds-PUW31_00160;Parent=gene-PUW31_00160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459036.1;locus_tag=PUW31_00160;product=transcriptional regulator;pseudo=true;transl_table=11 CP118128.1 Genbank gene 35222 36940 . + . ID=gene-PUW31_00165;Name=PUW31_00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00165 CP118128.1 Protein Homology CDS 35222 36940 . + 0 ID=cds-WJH08791.1;Parent=gene-PUW31_00165;Dbxref=NCBI_GP:WJH08791.1;Name=WJH08791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459037.1;locus_tag=PUW31_00165;product=aryl-sulfate sulfotransferase;protein_id=WJH08791.1;transl_table=11 CP118128.1 Genbank gene 36986 38557 . - . ID=gene-PUW31_00170;Name=PUW31_00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00170 CP118128.1 Protein Homology CDS 36986 38557 . - 0 ID=cds-WJH08792.1;Parent=gene-PUW31_00170;Dbxref=NCBI_GP:WJH08792.1;Name=WJH08792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459038.1;locus_tag=PUW31_00170;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;protein_id=WJH08792.1;transl_table=11 CP118128.1 Genbank gene 38656 39417 . - . ID=gene-PUW31_00175;Name=PUW31_00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00175 CP118128.1 Protein Homology CDS 38656 39417 . - 0 ID=cds-WJH08793.1;Parent=gene-PUW31_00175;Dbxref=NCBI_GP:WJH08793.1;Name=WJH08793.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459039.1;locus_tag=PUW31_00175;product=outer membrane protein OmpK;protein_id=WJH08793.1;transl_table=11 CP118128.1 Genbank pseudogene 40035 41502 . + . ID=gene-PUW31_00180;Name=PUW31_00180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_00180;pseudo=true CP118128.1 Protein Homology CDS 40035 41502 . + 0 ID=cds-PUW31_00180;Parent=gene-PUW31_00180;Note=frameshifted;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: protein motif:HMM:NF013080.2;locus_tag=PUW31_00180;product=sulfatase-like hydrolase/transferase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 41601 42791 . + . ID=gene-PUW31_00185;Name=PUW31_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00185 CP118128.1 Protein Homology CDS 41601 42791 . + 0 ID=cds-WJH08794.1;Parent=gene-PUW31_00185;Dbxref=NCBI_GP:WJH08794.1;Name=WJH08794.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459041.1;locus_tag=PUW31_00185;product=anaerobic sulfatase maturase;protein_id=WJH08794.1;transl_table=11 CP118128.1 Genbank gene 42810 44063 . + . ID=gene-PUW31_00190;Name=PUW31_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00190 CP118128.1 Protein Homology CDS 42810 44063 . + 0 ID=cds-WJH08795.1;Parent=gene-PUW31_00190;Dbxref=NCBI_GP:WJH08795.1;Name=WJH08795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459042.1;locus_tag=PUW31_00190;product=cytoplasmic protein;protein_id=WJH08795.1;transl_table=11 CP118128.1 Genbank gene 44190 45905 . + . ID=gene-PUW31_00195;Name=PUW31_00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00195 CP118128.1 Protein Homology CDS 44190 45905 . + 0 ID=cds-WJH08796.1;Parent=gene-PUW31_00195;Dbxref=NCBI_GP:WJH08796.1;Name=WJH08796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459043.1;locus_tag=PUW31_00195;product=aryl-sulfate sulfotransferase;protein_id=WJH08796.1;transl_table=11 CP118128.1 Genbank gene 46068 47234 . + . ID=gene-PUW31_00200;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=PUW31_00200 CP118128.1 Protein Homology CDS 46068 47234 . + 0 ID=cds-WJH08797.1;Parent=gene-PUW31_00200;Dbxref=NCBI_GP:WJH08797.1;Name=WJH08797.1;Ontology_term=GO:0006814,GO:1902600,GO:0015385;gbkey=CDS;gene=nhaA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459044.1;locus_tag=PUW31_00200;product=Na+/H+ antiporter NhaA;protein_id=WJH08797.1;transl_table=11 CP118128.1 Genbank gene 47296 48195 . + . ID=gene-PUW31_00205;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=PUW31_00205 CP118128.1 Protein Homology CDS 47296 48195 . + 0 ID=cds-WJH08798.1;Parent=gene-PUW31_00205;Dbxref=NCBI_GP:WJH08798.1;Name=WJH08798.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459045.1;locus_tag=PUW31_00205;product=transcriptional activator NhaR;protein_id=WJH08798.1;transl_table=11 CP118128.1 Genbank gene 48250 50289 . - . ID=gene-PUW31_00210;Name=PUW31_00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00210 CP118128.1 Protein Homology CDS 48250 50289 . - 0 ID=cds-WJH08799.1;Parent=gene-PUW31_00210;Dbxref=NCBI_GP:WJH08799.1;Name=WJH08799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459046.1;locus_tag=PUW31_00210;product=glycoside hydrolase family 31 protein;protein_id=WJH08799.1;transl_table=11 CP118128.1 Genbank pseudogene 50329 51701 . - . ID=gene-PUW31_00215;Name=PUW31_00215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_00215;pseudo=true CP118128.1 Protein Homology CDS 50329 51701 . - 0 ID=cds-PUW31_00215;Parent=gene-PUW31_00215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459047.1;locus_tag=PUW31_00215;product=MFS transporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 52157 52420 . - . ID=gene-PUW31_00220;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=PUW31_00220 CP118128.1 Protein Homology CDS 52157 52420 . - 0 ID=cds-WJH08800.1;Parent=gene-PUW31_00220;Dbxref=NCBI_GP:WJH08800.1;Name=WJH08800.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=PUW31_00220;product=30S ribosomal protein S20;protein_id=WJH08800.1;transl_table=11 CP118128.1 Genbank gene 52526 52741 . + . ID=gene-PUW31_00225;Name=PUW31_00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00225 CP118128.1 Protein Homology CDS 52526 52741 . + 0 ID=cds-WJH08801.1;Parent=gene-PUW31_00225;Dbxref=NCBI_GP:WJH08801.1;Name=WJH08801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459049.1;locus_tag=PUW31_00225;product=YaaY family protein;protein_id=WJH08801.1;transl_table=11 CP118128.1 Genbank pseudogene 52749 53686 . + . ID=gene-PUW31_00230;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=pseudogene;locus_tag=PUW31_00230;pseudo=true CP118128.1 Protein Homology CDS 52749 53686 . + 0 ID=cds-PUW31_00230;Parent=gene-PUW31_00230;Note=frameshifted;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459050.1;locus_tag=PUW31_00230;product=bifunctional riboflavin kinase/FAD synthetase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 53731 56565 . + . ID=gene-PUW31_00235;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=PUW31_00235 CP118128.1 Protein Homology CDS 53731 56565 . + 0 ID=cds-WJH08802.1;Parent=gene-PUW31_00235;Dbxref=NCBI_GP:WJH08802.1;Name=WJH08802.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124083.1;locus_tag=PUW31_00235;product=isoleucine--tRNA ligase;protein_id=WJH08802.1;transl_table=11 CP118128.1 Genbank gene 56565 57065 . + . ID=gene-PUW31_00240;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=PUW31_00240 CP118128.1 Protein Homology CDS 56565 57065 . + 0 ID=cds-WJH08803.1;Parent=gene-PUW31_00240;Dbxref=NCBI_GP:WJH08803.1;Name=WJH08803.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459052.1;locus_tag=PUW31_00240;product=signal peptidase II;protein_id=WJH08803.1;transl_table=11 CP118128.1 Genbank gene 57220 57669 . + . ID=gene-PUW31_00245;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=PUW31_00245 CP118128.1 Protein Homology CDS 57220 57669 . + 0 ID=cds-WJH08804.1;Parent=gene-PUW31_00245;Dbxref=NCBI_GP:WJH08804.1;Name=WJH08804.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459053.1;locus_tag=PUW31_00245;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WJH08804.1;transl_table=11 CP118128.1 Genbank gene 57672 58622 . + . ID=gene-PUW31_00250;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=PUW31_00250 CP118128.1 Protein Homology CDS 57672 58622 . + 0 ID=cds-WJH08805.1;Parent=gene-PUW31_00250;Dbxref=NCBI_GP:WJH08805.1;Name=WJH08805.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=PUW31_00250;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WJH08805.1;transl_table=11 CP118128.1 Genbank gene 58822 60024 . + . ID=gene-PUW31_00255;Name=PUW31_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00255 CP118128.1 Protein Homology CDS 58822 60024 . + 0 ID=cds-WJH08806.1;Parent=gene-PUW31_00255;Dbxref=NCBI_GP:WJH08806.1;Name=WJH08806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459055.1;locus_tag=PUW31_00255;product=nitrite reductase;protein_id=WJH08806.1;transl_table=11 CP118128.1 Genbank gene 60040 60960 . + . ID=gene-PUW31_00260;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=PUW31_00260 CP118128.1 Protein Homology CDS 60040 60960 . + 0 ID=cds-WJH08807.1;Parent=gene-PUW31_00260;Dbxref=NCBI_GP:WJH08807.1;Name=WJH08807.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459056.1;locus_tag=PUW31_00260;product=ribonucleoside hydrolase RihC;protein_id=WJH08807.1;transl_table=11 CP118128.1 Genbank gene 60982 61665 . - . ID=gene-PUW31_00265;Name=PUW31_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00265 CP118128.1 Protein Homology CDS 60982 61665 . - 0 ID=cds-WJH08808.1;Parent=gene-PUW31_00265;Dbxref=NCBI_GP:WJH08808.1;Name=WJH08808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459057.1;locus_tag=PUW31_00265;product=response regulator;protein_id=WJH08808.1;transl_table=11 CP118128.1 Genbank gene 61667 63286 . - . ID=gene-PUW31_00270;Name=PUW31_00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00270 CP118128.1 Protein Homology CDS 61667 63286 . - 0 ID=cds-WJH10818.1;Parent=gene-PUW31_00270;Dbxref=NCBI_GP:WJH10818.1;Name=WJH10818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459058.1;locus_tag=PUW31_00270;product=sensor histidine kinase;protein_id=WJH10818.1;transl_table=11 CP118128.1 Genbank gene 63421 64722 . - . ID=gene-PUW31_00275;Name=PUW31_00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00275 CP118128.1 Protein Homology CDS 63421 64722 . - 0 ID=cds-WJH08809.1;Parent=gene-PUW31_00275;Dbxref=NCBI_GP:WJH08809.1;Name=WJH08809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=PUW31_00275;product=oxalacetate decarboxylase subunit beta;protein_id=WJH08809.1;transl_table=11 CP118128.1 Genbank gene 64735 66507 . - . ID=gene-PUW31_00280;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=PUW31_00280 CP118128.1 Protein Homology CDS 64735 66507 . - 0 ID=cds-WJH08810.1;Parent=gene-PUW31_00280;Dbxref=NCBI_GP:WJH08810.1;Name=WJH08810.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=PUW31_00280;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WJH08810.1;transl_table=11 CP118128.1 Genbank gene 66524 66763 . - . ID=gene-PUW31_00285;Name=PUW31_00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00285 CP118128.1 Protein Homology CDS 66524 66763 . - 0 ID=cds-WJH08811.1;Parent=gene-PUW31_00285;Dbxref=NCBI_GP:WJH08811.1;Name=WJH08811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459061.1;locus_tag=PUW31_00285;product=oxaloacetate decarboxylase subunit gamma;protein_id=WJH08811.1;transl_table=11 CP118128.1 Genbank pseudogene 66922 68260 . - . ID=gene-PUW31_00290;Name=citS;gbkey=Gene;gene=citS;gene_biotype=pseudogene;locus_tag=PUW31_00290;pseudo=true CP118128.1 Protein Homology CDS 66922 68260 . - 0 ID=cds-PUW31_00290;Parent=gene-PUW31_00290;Note=frameshifted;gbkey=CDS;gene=citS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459062.1;locus_tag=PUW31_00290;product=citrate/sodium symporter CitS;pseudo=true;transl_table=11 CP118128.1 Genbank gene 68505 69548 . + . ID=gene-PUW31_00295;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=PUW31_00295 CP118128.1 Protein Homology CDS 68505 69548 . + 0 ID=cds-WJH08812.1;Parent=gene-PUW31_00295;Dbxref=NCBI_GP:WJH08812.1;Name=WJH08812.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459063.1;locus_tag=PUW31_00295;product=[citrate (pro-3S)-lyase] ligase;protein_id=WJH08812.1;transl_table=11 CP118128.1 Genbank gene 69578 69871 . + . ID=gene-PUW31_00300;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=PUW31_00300 CP118128.1 Protein Homology CDS 69578 69871 . + 0 ID=cds-WJH08813.1;Parent=gene-PUW31_00300;Dbxref=NCBI_GP:WJH08813.1;Name=WJH08813.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citD;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459064.1;locus_tag=PUW31_00300;product=citrate lyase acyl carrier protein;protein_id=WJH08813.1;transl_table=11 CP118128.1 Genbank gene 69868 70737 . + . ID=gene-PUW31_00305;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=PUW31_00305 CP118128.1 Protein Homology CDS 69868 70737 . + 0 ID=cds-WJH08814.1;Parent=gene-PUW31_00305;Dbxref=NCBI_GP:WJH08814.1;Name=WJH08814.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citE;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459065.1;locus_tag=PUW31_00305;product=citrate (pro-3S)-lyase subunit beta;protein_id=WJH08814.1;transl_table=11 CP118128.1 Genbank gene 70748 72268 . + . ID=gene-PUW31_00310;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=PUW31_00310 CP118128.1 Protein Homology CDS 70748 72268 . + 0 ID=cds-WJH08815.1;Parent=gene-PUW31_00310;Dbxref=NCBI_GP:WJH08815.1;Name=WJH08815.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459066.1;locus_tag=PUW31_00310;product=citrate lyase subunit alpha;protein_id=WJH08815.1;transl_table=11 CP118128.1 Genbank gene 72268 72819 . + . ID=gene-PUW31_00315;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=PUW31_00315 CP118128.1 Protein Homology CDS 72268 72819 . + 0 ID=cds-WJH08816.1;Parent=gene-PUW31_00315;Dbxref=NCBI_GP:WJH08816.1;Name=WJH08816.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459067.1;locus_tag=PUW31_00315;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WJH08816.1;transl_table=11 CP118128.1 Genbank gene 72797 73705 . + . ID=gene-PUW31_00320;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=PUW31_00320 CP118128.1 Protein Homology CDS 72797 73705 . + 0 ID=cds-WJH08817.1;Parent=gene-PUW31_00320;Dbxref=NCBI_GP:WJH08817.1;Name=WJH08817.1;Ontology_term=GO:0019361,GO:0046917;gbkey=CDS;gene=citG;go_function=triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process|0019361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459068.1;locus_tag=PUW31_00320;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WJH08817.1;transl_table=11 CP118128.1 Genbank gene 73885 74706 . + . ID=gene-PUW31_00325;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=PUW31_00325 CP118128.1 Protein Homology CDS 73885 74706 . + 0 ID=cds-WJH08818.1;Parent=gene-PUW31_00325;Dbxref=NCBI_GP:WJH08818.1;Name=WJH08818.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459069.1;locus_tag=PUW31_00325;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WJH08818.1;transl_table=11 CP118128.1 Genbank pseudogene 75569 76716 . + . ID=gene-PUW31_00330;Name=carA;gbkey=Gene;gene=carA;gene_biotype=pseudogene;locus_tag=PUW31_00330;pseudo=true CP118128.1 Protein Homology CDS 75569 76716 . + 0 ID=cds-PUW31_00330;Parent=gene-PUW31_00330;Note=frameshifted;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carA;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459071.1;locus_tag=PUW31_00330;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;pseudo=true;transl_table=11 CP118128.1 Genbank gene 76735 79962 . + . ID=gene-PUW31_00335;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=PUW31_00335 CP118128.1 Protein Homology CDS 76735 79962 . + 0 ID=cds-WJH08819.1;Parent=gene-PUW31_00335;Dbxref=NCBI_GP:WJH08819.1;Name=WJH08819.1;Ontology_term=GO:0006807,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459072.1;locus_tag=PUW31_00335;product=carbamoyl-phosphate synthase large subunit;protein_id=WJH08819.1;transl_table=11 CP118128.1 Genbank gene 80236 80631 . + . ID=gene-PUW31_00340;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=PUW31_00340 CP118128.1 Protein Homology CDS 80236 80631 . + 0 ID=cds-WJH08820.1;Parent=gene-PUW31_00340;Dbxref=NCBI_GP:WJH08820.1;Name=WJH08820.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459073.1;locus_tag=PUW31_00340;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WJH08820.1;transl_table=11 CP118128.1 Genbank gene 80709 81305 . - . ID=gene-PUW31_00345;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=PUW31_00345 CP118128.1 Protein Homology CDS 80709 81305 . - 0 ID=cds-WJH08821.1;Parent=gene-PUW31_00345;Dbxref=NCBI_GP:WJH08821.1;Name=WJH08821.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459074.1;locus_tag=PUW31_00345;product=carnitine operon protein CaiE;protein_id=WJH08821.1;transl_table=11 CP118128.1 Genbank gene 81415 82200 . - . ID=gene-PUW31_00350;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=PUW31_00350 CP118128.1 Protein Homology CDS 81415 82200 . - 0 ID=cds-WJH08822.1;Parent=gene-PUW31_00350;Dbxref=NCBI_GP:WJH08822.1;Name=WJH08822.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=PUW31_00350;product=crotonobetainyl-CoA hydratase;protein_id=WJH08822.1;transl_table=11 CP118128.1 Genbank pseudogene 82254 83807 . - . ID=gene-PUW31_00355;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=pseudogene;locus_tag=PUW31_00355;pseudo=true CP118128.1 Protein Homology CDS 82254 83807 . - 0 ID=cds-PUW31_00355;Parent=gene-PUW31_00355;Note=internal stop;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459076.1;locus_tag=PUW31_00355;product=crotonobetaine/carnitine-CoA ligase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 83870 85087 . - . ID=gene-PUW31_00360;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=PUW31_00360 CP118128.1 Protein Homology CDS 83870 85087 . - 0 ID=cds-WJH10819.1;Parent=gene-PUW31_00360;Dbxref=NCBI_GP:WJH10819.1;Name=WJH10819.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459077.1;locus_tag=PUW31_00360;product=L-carnitine CoA-transferase;protein_id=WJH10819.1;transl_table=11 CP118128.1 Genbank pseudogene 85199 86340 . - . ID=gene-PUW31_00365;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=pseudogene;locus_tag=PUW31_00365;pseudo=true CP118128.1 Protein Homology CDS 85199 86340 . - 0 ID=cds-PUW31_00365;Parent=gene-PUW31_00365;Note=frameshifted;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=PUW31_00365;product=crotonobetainyl-CoA dehydrogenase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 86375 87892 . - . ID=gene-PUW31_00370;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=PUW31_00370 CP118128.1 Protein Homology CDS 86375 87892 . - 0 ID=cds-WJH08823.1;Parent=gene-PUW31_00370;Dbxref=NCBI_GP:WJH08823.1;Name=WJH08823.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459079.1;locus_tag=PUW31_00370;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WJH08823.1;transl_table=11 CP118128.1 Genbank gene 88373 89143 . + . ID=gene-PUW31_00375;Name=PUW31_00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00375 CP118128.1 Protein Homology CDS 88373 89143 . + 0 ID=cds-WJH08824.1;Parent=gene-PUW31_00375;Dbxref=NCBI_GP:WJH08824.1;Name=WJH08824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459080.1;locus_tag=PUW31_00375;product=electron transfer flavoprotein FixA;protein_id=WJH08824.1;transl_table=11 CP118128.1 Genbank gene 89159 90100 . + . ID=gene-PUW31_00380;Name=PUW31_00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00380 CP118128.1 Protein Homology CDS 89159 90100 . + 0 ID=cds-WJH08825.1;Parent=gene-PUW31_00380;Dbxref=NCBI_GP:WJH08825.1;Name=WJH08825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459081.1;locus_tag=PUW31_00380;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WJH08825.1;transl_table=11 CP118128.1 Genbank gene 90150 91436 . + . ID=gene-PUW31_00385;Name=PUW31_00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00385 CP118128.1 Protein Homology CDS 90150 91436 . + 0 ID=cds-WJH08826.1;Parent=gene-PUW31_00385;Dbxref=NCBI_GP:WJH08826.1;Name=WJH08826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459082.1;locus_tag=PUW31_00385;product=FAD-dependent oxidoreductase;protein_id=WJH08826.1;transl_table=11 CP118128.1 Genbank gene 91433 91720 . + . ID=gene-PUW31_00390;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=PUW31_00390 CP118128.1 Protein Homology CDS 91433 91720 . + 0 ID=cds-WJH08827.1;Parent=gene-PUW31_00390;Dbxref=NCBI_GP:WJH08827.1;Name=WJH08827.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459083.1;locus_tag=PUW31_00390;product=ferredoxin-like protein FixX;protein_id=WJH08827.1;transl_table=11 CP118128.1 Genbank gene 91867 93207 . + . ID=gene-PUW31_00395;Name=PUW31_00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00395 CP118128.1 Protein Homology CDS 91867 93207 . + 0 ID=cds-WJH08828.1;Parent=gene-PUW31_00395;Dbxref=NCBI_GP:WJH08828.1;Name=WJH08828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746786.1;locus_tag=PUW31_00395;product=MFS transporter;protein_id=WJH08828.1;transl_table=11 CP118128.1 Genbank gene 93296 93526 . + . ID=gene-PUW31_00400;Name=PUW31_00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00400 CP118128.1 Protein Homology CDS 93296 93526 . + 0 ID=cds-WJH08829.1;Parent=gene-PUW31_00400;Dbxref=NCBI_GP:WJH08829.1;Name=WJH08829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459085.1;locus_tag=PUW31_00400;product=YgdI/YgdR family lipoprotein;protein_id=WJH08829.1;transl_table=11 CP118128.1 Genbank pseudogene 93818 94233 . + . ID=gene-PUW31_00405;Name=PUW31_00405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_00405;pseudo=true CP118128.1 Protein Homology CDS 93818 94233 . + 0 ID=cds-PUW31_00405;Parent=gene-PUW31_00405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459086.1;locus_tag=PUW31_00405;product=hypothetical protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 94457 94747 . - . ID=gene-PUW31_00410;Name=srfN;gbkey=Gene;gene=srfN;gene_biotype=protein_coding;locus_tag=PUW31_00410 CP118128.1 Protein Homology CDS 94457 94747 . - 0 ID=cds-WJH08830.1;Parent=gene-PUW31_00410;Dbxref=NCBI_GP:WJH08830.1;Name=WJH08830.1;gbkey=CDS;gene=srfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459087.1;locus_tag=PUW31_00410;product=DUF1471 family virulence protein SrfN;protein_id=WJH08830.1;transl_table=11 CP118128.1 Genbank gene 95645 97534 . + . ID=gene-PUW31_00415;Name=PUW31_00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00415 CP118128.1 Protein Homology CDS 95645 97534 . + 0 ID=cds-WJH08831.1;Parent=gene-PUW31_00415;Dbxref=NCBI_GP:WJH08831.1;Name=WJH08831.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459089.1;locus_tag=PUW31_00415;product=sulfatase-like hydrolase/transferase;protein_id=WJH08831.1;transl_table=11 CP118128.1 Genbank gene 97941 98471 . + . ID=gene-PUW31_00420;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=PUW31_00420 CP118128.1 Protein Homology CDS 97941 98471 . + 0 ID=cds-WJH08832.1;Parent=gene-PUW31_00420;Dbxref=NCBI_GP:WJH08832.1;Name=WJH08832.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459090.1;locus_tag=PUW31_00420;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WJH08832.1;transl_table=11 CP118128.1 Genbank gene 98464 100332 . + . ID=gene-PUW31_00425;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=PUW31_00425 CP118128.1 Protein Homology CDS 98464 100332 . + 0 ID=cds-WJH08833.1;Parent=gene-PUW31_00425;Dbxref=NCBI_GP:WJH08833.1;Name=WJH08833.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459091.1;locus_tag=PUW31_00425;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WJH08833.1;transl_table=11 CP118128.1 Genbank gene 100531 101010 . + . ID=gene-PUW31_00430;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=PUW31_00430 CP118128.1 Protein Homology CDS 100531 101010 . + 0 ID=cds-WJH08834.1;Parent=gene-PUW31_00430;Dbxref=NCBI_GP:WJH08834.1;Name=WJH08834.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=PUW31_00430;product=type 3 dihydrofolate reductase;protein_id=WJH08834.1;transl_table=11 CP118128.1 Genbank gene 101116 101964 . - . ID=gene-PUW31_00435;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=PUW31_00435 CP118128.1 Protein Homology CDS 101116 101964 . - 0 ID=cds-WJH08835.1;Parent=gene-PUW31_00435;Dbxref=NCBI_GP:WJH08835.1;Name=WJH08835.1;Ontology_term=GO:0006139,GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459093.1;locus_tag=PUW31_00435;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WJH08835.1;transl_table=11 CP118128.1 Genbank gene 101975 102352 . - . ID=gene-PUW31_00440;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=PUW31_00440 CP118128.1 Protein Homology CDS 101975 102352 . - 0 ID=cds-WJH08836.1;Parent=gene-PUW31_00440;Dbxref=NCBI_GP:WJH08836.1;Name=WJH08836.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459094.1;locus_tag=PUW31_00440;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WJH08836.1;transl_table=11 CP118128.1 Genbank gene 102355 103176 . - . ID=gene-PUW31_00445;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=PUW31_00445 CP118128.1 Protein Homology CDS 102355 103176 . - 0 ID=cds-WJH08837.1;Parent=gene-PUW31_00445;Dbxref=NCBI_GP:WJH08837.1;Name=WJH08837.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459095.1;locus_tag=PUW31_00445;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WJH08837.1;transl_table=11 CP118128.1 Genbank gene 103173 104162 . - . ID=gene-PUW31_00450;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=PUW31_00450 CP118128.1 Protein Homology CDS 103173 104162 . - 0 ID=cds-WJH08838.1;Parent=gene-PUW31_00450;Dbxref=NCBI_GP:WJH08838.1;Name=WJH08838.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459096.1;locus_tag=PUW31_00450;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WJH08838.1;transl_table=11 CP118128.1 Genbank gene 104162 105448 . - . ID=gene-PUW31_00455;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=PUW31_00455 CP118128.1 Protein Homology CDS 104162 105448 . - 0 ID=cds-WJH08839.1;Parent=gene-PUW31_00455;Dbxref=NCBI_GP:WJH08839.1;Name=WJH08839.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459097.1;locus_tag=PUW31_00455;product=peptidylprolyl isomerase SurA;protein_id=WJH08839.1;transl_table=11 CP118128.1 Genbank pseudogene 105502 107861 . - . ID=gene-PUW31_00460;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=pseudogene;locus_tag=PUW31_00460;pseudo=true CP118128.1 Protein Homology CDS 105502 107861 . - 0 ID=cds-PUW31_00460;Parent=gene-PUW31_00460;Note=frameshifted;Ontology_term=GO:0010033,GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=response to organic substance|0010033||IEA,lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459098.1;locus_tag=PUW31_00460;product=LPS assembly protein LptD;pseudo=true;transl_table=11 CP118128.1 Genbank gene 108115 108927 . + . ID=gene-PUW31_00465;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=PUW31_00465 CP118128.1 Protein Homology CDS 108115 108927 . + 0 ID=cds-WJH08840.1;Parent=gene-PUW31_00465;Dbxref=NCBI_GP:WJH08840.1;Name=WJH08840.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459099.1;locus_tag=PUW31_00465;product=co-chaperone DjlA;protein_id=WJH08840.1;transl_table=11 CP118128.1 Genbank gene 109022 109681 . - . ID=gene-PUW31_00470;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=PUW31_00470 CP118128.1 Protein Homology CDS 109022 109681 . - 0 ID=cds-WJH08841.1;Parent=gene-PUW31_00470;Dbxref=NCBI_GP:WJH08841.1;Name=WJH08841.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459100.1;locus_tag=PUW31_00470;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WJH08841.1;transl_table=11 CP118128.1 Genbank gene 109693 112599 . - . ID=gene-PUW31_00475;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=PUW31_00475 CP118128.1 Protein Homology CDS 109693 112599 . - 0 ID=cds-WJH08842.1;Parent=gene-PUW31_00475;Dbxref=NCBI_GP:WJH08842.1;Name=WJH08842.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=PUW31_00475;product=RNA polymerase-associated protein RapA;protein_id=WJH08842.1;transl_table=11 CP118128.1 Genbank gene 112773 115124 . - . ID=gene-PUW31_00480;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=PUW31_00480 CP118128.1 Protein Homology CDS 112773 115124 . - 0 ID=cds-WJH08843.1;Parent=gene-PUW31_00480;Dbxref=NCBI_GP:WJH08843.1;Name=WJH08843.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459102.1;locus_tag=PUW31_00480;product=DNA polymerase II;protein_id=WJH08843.1;transl_table=11 CP118128.1 Genbank gene 115168 115788 . - . ID=gene-PUW31_00485;Name=PUW31_00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00485 CP118128.1 Protein Homology CDS 115168 115788 . - 0 ID=cds-WJH08844.1;Parent=gene-PUW31_00485;Dbxref=NCBI_GP:WJH08844.1;Name=WJH08844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=PUW31_00485;product=YdcF family protein;protein_id=WJH08844.1;transl_table=11 CP118128.1 Genbank gene 116306 116725 . + . ID=gene-PUW31_00490;Name=PUW31_00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00490 CP118128.1 Protein Homology CDS 116306 116725 . + 0 ID=cds-WJH08845.1;Parent=gene-PUW31_00490;Dbxref=NCBI_GP:WJH08845.1;Name=WJH08845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459105.1;locus_tag=PUW31_00490;product=DUF4751 family protein;protein_id=WJH08845.1;transl_table=11 CP118128.1 Genbank gene 116731 117426 . - . ID=gene-PUW31_00495;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=PUW31_00495 CP118128.1 Protein Homology CDS 116731 117426 . - 0 ID=cds-WJH08846.1;Parent=gene-PUW31_00495;Dbxref=NCBI_GP:WJH08846.1;Name=WJH08846.1;Ontology_term=GO:0019568,GO:0008742;gbkey=CDS;gene=araD;go_function=L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459106.1;locus_tag=PUW31_00495;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WJH08846.1;transl_table=11 CP118128.1 Genbank gene 117567 119069 . - . ID=gene-PUW31_00500;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=PUW31_00500 CP118128.1 Protein Homology CDS 117567 119069 . - 0 ID=cds-WJH08847.1;Parent=gene-PUW31_00500;Dbxref=NCBI_GP:WJH08847.1;Name=WJH08847.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459107.1;locus_tag=PUW31_00500;product=L-arabinose isomerase;protein_id=WJH08847.1;transl_table=11 CP118128.1 Genbank gene 119080 120789 . - . ID=gene-PUW31_00505;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=PUW31_00505 CP118128.1 Protein Homology CDS 119080 120789 . - 0 ID=cds-WJH08848.1;Parent=gene-PUW31_00505;Dbxref=NCBI_GP:WJH08848.1;Name=WJH08848.1;Ontology_term=GO:0019568,GO:0008741;gbkey=CDS;gene=araB;go_function=ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459108.1;locus_tag=PUW31_00505;product=ribulokinase;protein_id=WJH08848.1;transl_table=11 CP118128.1 Genbank pseudogene 121128 121972 . + . ID=gene-PUW31_00510;Name=araC;gbkey=Gene;gene=araC;gene_biotype=pseudogene;locus_tag=PUW31_00510;pseudo=true CP118128.1 Protein Homology CDS 121128 121972 . + 0 ID=cds-PUW31_00510;Parent=gene-PUW31_00510;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459109.1;locus_tag=PUW31_00510;product=arabinose operon transcriptional regulator AraC;pseudo=true;transl_table=11 CP118128.1 Genbank gene 122091 122858 . + . ID=gene-PUW31_00515;Name=PUW31_00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00515 CP118128.1 Protein Homology CDS 122091 122858 . + 0 ID=cds-WJH08849.1;Parent=gene-PUW31_00515;Dbxref=NCBI_GP:WJH08849.1;Name=WJH08849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459110.1;locus_tag=PUW31_00515;product=DedA family protein;protein_id=WJH08849.1;transl_table=11 CP118128.1 Genbank gene 122897 123604 . - . ID=gene-PUW31_00520;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=PUW31_00520 CP118128.1 Protein Homology CDS 122897 123604 . - 0 ID=cds-WJH08850.1;Parent=gene-PUW31_00520;Dbxref=NCBI_GP:WJH08850.1;Name=WJH08850.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459111.1;locus_tag=PUW31_00520;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WJH08850.1;transl_table=11 CP118128.1 Genbank gene 123588 125198 . - . ID=gene-PUW31_00525;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=PUW31_00525 CP118128.1 Protein Homology CDS 123588 125198 . - 0 ID=cds-WJH08851.1;Parent=gene-PUW31_00525;Dbxref=NCBI_GP:WJH08851.1;Name=WJH08851.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459112.1;locus_tag=PUW31_00525;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WJH08851.1;transl_table=11 CP118128.1 Genbank gene 125174 126157 . - . ID=gene-PUW31_00530;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=PUW31_00530 CP118128.1 Protein Homology CDS 125174 126157 . - 0 ID=cds-WJH08852.1;Parent=gene-PUW31_00530;Dbxref=NCBI_GP:WJH08852.1;Name=WJH08852.1;Ontology_term=GO:0015888,GO:0030974,GO:0030975,GO:0030976,GO:0048502,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,thiamine pyrophosphate binding|0030976||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA,thiamine pyrophosphate transmembrane transport|0030974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459113.1;locus_tag=PUW31_00530;product=thiamine ABC transporter substrate binding subunit;protein_id=WJH08852.1;transl_table=11 CP118128.1 cmsearch riboswitch 126189 126288 . - . ID=id-CP118128.1:126189..126288;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118128.1 Genbank gene 126335 127993 . - . ID=gene-PUW31_00535;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=PUW31_00535 CP118128.1 Protein Homology CDS 126335 127993 . - 0 ID=cds-WJH08853.1;Parent=gene-PUW31_00535;Dbxref=NCBI_GP:WJH08853.1;Name=WJH08853.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459114.1;locus_tag=PUW31_00535;product=HTH-type transcriptional regulator SgrR;protein_id=WJH08853.1;transl_table=11 CP118128.1 Genbank gene 128086 128208 . + . ID=gene-PUW31_00540;Name=PUW31_00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00540 CP118128.1 Protein Homology CDS 128086 128208 . + 0 ID=cds-WJH10629.1;Parent=gene-PUW31_00540;Dbxref=NCBI_GP:WJH10629.1;Name=WJH10629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248755.1;locus_tag=PUW31_00540;product=glucose uptake inhibitor SgrT;protein_id=WJH10629.1;transl_table=11 CP118128.1 Genbank gene 128528 128809 . + . ID=gene-PUW31_00545;Name=PUW31_00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00545 CP118128.1 Protein Homology CDS 128528 128809 . + 0 ID=cds-WJH08854.1;Parent=gene-PUW31_00545;Dbxref=NCBI_GP:WJH08854.1;Name=WJH08854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264185.1;locus_tag=PUW31_00545;product=DUF5339 family protein;protein_id=WJH08854.1;transl_table=11 CP118128.1 Genbank gene 128863 129468 . - . ID=gene-PUW31_00550;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=PUW31_00550 CP118128.1 Protein Homology CDS 128863 129468 . - 0 ID=cds-WJH08855.1;Parent=gene-PUW31_00550;Dbxref=NCBI_GP:WJH08855.1;Name=WJH08855.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459115.1;locus_tag=PUW31_00550;product=3-isopropylmalate dehydratase small subunit;protein_id=WJH08855.1;transl_table=11 CP118128.1 Genbank gene 129479 130879 . - . ID=gene-PUW31_00555;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=PUW31_00555 CP118128.1 Protein Homology CDS 129479 130879 . - 0 ID=cds-WJH08856.1;Parent=gene-PUW31_00555;Dbxref=NCBI_GP:WJH08856.1;Name=WJH08856.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459116.1;locus_tag=PUW31_00555;product=3-isopropylmalate dehydratase large subunit;protein_id=WJH08856.1;transl_table=11 CP118128.1 Genbank gene 130882 131973 . - . ID=gene-PUW31_00560;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=PUW31_00560 CP118128.1 Protein Homology CDS 130882 131973 . - 0 ID=cds-WJH08857.1;Parent=gene-PUW31_00560;Dbxref=NCBI_GP:WJH08857.1;Name=WJH08857.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=PUW31_00560;product=3-isopropylmalate dehydrogenase;protein_id=WJH08857.1;transl_table=11 CP118128.1 Genbank gene 131973 133544 . - . ID=gene-PUW31_00565;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=PUW31_00565 CP118128.1 Protein Homology CDS 131973 133544 . - 0 ID=cds-WJH08858.1;Parent=gene-PUW31_00565;Dbxref=NCBI_GP:WJH08858.1;Name=WJH08858.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=PUW31_00565;product=2-isopropylmalate synthase;protein_id=WJH08858.1;transl_table=11 CP118128.1 Genbank gene 133632 133718 . - . ID=gene-PUW31_00570;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=PUW31_00570 CP118128.1 Protein Homology CDS 133632 133718 . - 0 ID=cds-WJH10630.1;Parent=gene-PUW31_00570;Dbxref=NCBI_GP:WJH10630.1;Name=WJH10630.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459119.1;locus_tag=PUW31_00570;product=leu operon leader peptide;protein_id=WJH10630.1;transl_table=11 CP118128.1 Genbank gene 134385 135329 . + . ID=gene-PUW31_00575;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=PUW31_00575 CP118128.1 Protein Homology CDS 134385 135329 . + 0 ID=cds-WJH08859.1;Parent=gene-PUW31_00575;Dbxref=NCBI_GP:WJH08859.1;Name=WJH08859.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459120.1;locus_tag=PUW31_00575;product=transcriptional regulator LeuO;protein_id=WJH08859.1;transl_table=11 CP118128.1 Genbank gene 135651 137375 . + . ID=gene-PUW31_00580;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=PUW31_00580 CP118128.1 Protein Homology CDS 135651 137375 . + 0 ID=cds-WJH08860.1;Parent=gene-PUW31_00580;Dbxref=NCBI_GP:WJH08860.1;Name=WJH08860.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=PUW31_00580;product=acetolactate synthase 3 large subunit;protein_id=WJH08860.1;transl_table=11 CP118128.1 Genbank gene 137378 137869 . + . ID=gene-PUW31_00585;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=PUW31_00585 CP118128.1 Protein Homology CDS 137378 137869 . + 0 ID=cds-WJH10631.1;Parent=gene-PUW31_00585;Dbxref=NCBI_GP:WJH10631.1;Name=WJH10631.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=PUW31_00585;product=acetolactate synthase small subunit;protein_id=WJH10631.1;transl_table=11 CP118128.1 Genbank gene 138153 139157 . + . ID=gene-PUW31_00590;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=PUW31_00590 CP118128.1 Protein Homology CDS 138153 139157 . + 0 ID=cds-WJH08861.1;Parent=gene-PUW31_00590;Dbxref=NCBI_GP:WJH08861.1;Name=WJH08861.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459123.1;locus_tag=PUW31_00590;product=catabolite repressor/activator;protein_id=WJH08861.1;transl_table=11 CP118128.1 Genbank gene 139763 140221 . + . ID=gene-PUW31_00595;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=PUW31_00595 CP118128.1 Protein Homology CDS 139763 140221 . + 0 ID=cds-WJH08862.1;Parent=gene-PUW31_00595;Dbxref=NCBI_GP:WJH08862.1;Name=WJH08862.1;Ontology_term=GO:0051302,GO:0043565;gbkey=CDS;gene=mraZ;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of cell division|0051302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=PUW31_00595;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WJH08862.1;transl_table=11 CP118128.1 Genbank gene 140223 141164 . + . ID=gene-PUW31_00600;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=PUW31_00600 CP118128.1 Protein Homology CDS 140223 141164 . + 0 ID=cds-WJH08863.1;Parent=gene-PUW31_00600;Dbxref=NCBI_GP:WJH08863.1;Name=WJH08863.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=PUW31_00600;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WJH08863.1;transl_table=11 CP118128.1 Genbank gene 141161 141526 . + . ID=gene-PUW31_00605;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=PUW31_00605 CP118128.1 Protein Homology CDS 141161 141526 . + 0 ID=cds-WJH08864.1;Parent=gene-PUW31_00605;Dbxref=NCBI_GP:WJH08864.1;Name=WJH08864.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=PUW31_00605;product=cell division protein FtsL;protein_id=WJH08864.1;transl_table=11 CP118128.1 Genbank gene 141542 143308 . + . ID=gene-PUW31_00610;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=PUW31_00610 CP118128.1 Protein Homology CDS 141542 143308 . + 0 ID=cds-WJH08865.1;Parent=gene-PUW31_00610;Dbxref=NCBI_GP:WJH08865.1;Name=WJH08865.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=PUW31_00610;product=peptidoglycan glycosyltransferase FtsI;protein_id=WJH08865.1;transl_table=11 CP118128.1 Genbank gene 143295 144782 . + . ID=gene-PUW31_00615;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=PUW31_00615 CP118128.1 Protein Homology CDS 143295 144782 . + 0 ID=cds-WJH08866.1;Parent=gene-PUW31_00615;Dbxref=NCBI_GP:WJH08866.1;Name=WJH08866.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459128.1;locus_tag=PUW31_00615;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WJH08866.1;transl_table=11 CP118128.1 Genbank gene 144779 146137 . + . ID=gene-PUW31_00620;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=PUW31_00620 CP118128.1 Protein Homology CDS 144779 146137 . + 0 ID=cds-WJH08867.1;Parent=gene-PUW31_00620;Dbxref=NCBI_GP:WJH08867.1;Name=WJH08867.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459129.1;locus_tag=PUW31_00620;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WJH08867.1;transl_table=11 CP118128.1 Genbank gene 146131 147213 . + . ID=gene-PUW31_00625;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=PUW31_00625 CP118128.1 Protein Homology CDS 146131 147213 . + 0 ID=cds-WJH08868.1;Parent=gene-PUW31_00625;Dbxref=NCBI_GP:WJH08868.1;Name=WJH08868.1;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=PUW31_00625;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WJH08868.1;transl_table=11 CP118128.1 Genbank gene 147216 148532 . + . ID=gene-PUW31_00630;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=PUW31_00630 CP118128.1 Protein Homology CDS 147216 148532 . + 0 ID=cds-WJH08869.1;Parent=gene-PUW31_00630;Dbxref=NCBI_GP:WJH08869.1;Name=WJH08869.1;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=PUW31_00630;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WJH08869.1;transl_table=11 CP118128.1 Genbank pseudogene 148715 149775 . + . ID=gene-PUW31_00635;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=pseudogene;locus_tag=PUW31_00635;pseudo=true CP118128.1 Protein Homology CDS 148715 149775 . + 0 ID=cds-PUW31_00635;Parent=gene-PUW31_00635;Note=frameshifted;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: protein motif:HMM:NF013279.2;locus_tag=PUW31_00635;product=cell division protein FtsW;pseudo=true;transl_table=11 CP118128.1 Genbank gene 149772 150839 . + . ID=gene-PUW31_00640;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=PUW31_00640 CP118128.1 Protein Homology CDS 149772 150839 . + 0 ID=cds-WJH08870.1;Parent=gene-PUW31_00640;Dbxref=NCBI_GP:WJH08870.1;Name=WJH08870.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459133.1;locus_tag=PUW31_00640;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WJH08870.1;transl_table=11 CP118128.1 Genbank gene 150958 152433 . + . ID=gene-PUW31_00645;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=PUW31_00645 CP118128.1 Protein Homology CDS 150958 152433 . + 0 ID=cds-WJH08871.1;Parent=gene-PUW31_00645;Dbxref=NCBI_GP:WJH08871.1;Name=WJH08871.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459134.1;locus_tag=PUW31_00645;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WJH08871.1;transl_table=11 CP118128.1 Genbank gene 152426 153346 . + . ID=gene-PUW31_00650;Name=PUW31_00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00650 CP118128.1 Protein Homology CDS 152426 153346 . + 0 ID=cds-WJH08872.1;Parent=gene-PUW31_00650;Dbxref=NCBI_GP:WJH08872.1;Name=WJH08872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459135.1;locus_tag=PUW31_00650;product=D-alanine--D-alanine ligase;protein_id=WJH08872.1;transl_table=11 CP118128.1 Genbank gene 153348 154178 . + . ID=gene-PUW31_00655;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=PUW31_00655 CP118128.1 Protein Homology CDS 153348 154178 . + 0 ID=cds-WJH08873.1;Parent=gene-PUW31_00655;Dbxref=NCBI_GP:WJH08873.1;Name=WJH08873.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459136.1;locus_tag=PUW31_00655;product=cell division protein FtsQ;protein_id=WJH08873.1;transl_table=11 CP118128.1 Genbank gene 154175 155437 . + . ID=gene-PUW31_00660;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=PUW31_00660 CP118128.1 Protein Homology CDS 154175 155437 . + 0 ID=cds-WJH08874.1;Parent=gene-PUW31_00660;Dbxref=NCBI_GP:WJH08874.1;Name=WJH08874.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459137.1;locus_tag=PUW31_00660;product=cell division protein FtsA;protein_id=WJH08874.1;transl_table=11 CP118128.1 Genbank pseudogene 155498 156648 . + . ID=gene-PUW31_00665;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=pseudogene;locus_tag=PUW31_00665;pseudo=true CP118128.1 Protein Homology CDS 155498 156648 . + 0 ID=cds-PUW31_00665;Parent=gene-PUW31_00665;Note=frameshifted;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=PUW31_00665;product=cell division protein FtsZ;pseudo=true;transl_table=11 CP118128.1 Genbank gene 156749 157666 . + . ID=gene-PUW31_00670;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=PUW31_00670 CP118128.1 Protein Homology CDS 156749 157666 . + 0 ID=cds-WJH08875.1;Parent=gene-PUW31_00670;Dbxref=NCBI_GP:WJH08875.1;Name=WJH08875.1;Ontology_term=GO:0009245,GO:0008759;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity|0008759||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459139.1;locus_tag=PUW31_00670;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WJH08875.1;transl_table=11 CP118128.1 Genbank gene 157945 158442 . + . ID=gene-PUW31_00675;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=PUW31_00675 CP118128.1 Protein Homology CDS 157945 158442 . + 0 ID=cds-WJH08876.1;Parent=gene-PUW31_00675;Dbxref=NCBI_GP:WJH08876.1;Name=WJH08876.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014335.1;locus_tag=PUW31_00675;product=secA translation cis-regulator SecM;protein_id=WJH08876.1;transl_table=11 CP118128.1 Genbank gene 158504 161209 . + . ID=gene-PUW31_00680;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=PUW31_00680 CP118128.1 Protein Homology CDS 158504 161209 . + 0 ID=cds-WJH08877.1;Parent=gene-PUW31_00680;Dbxref=NCBI_GP:WJH08877.1;Name=WJH08877.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459141.1;locus_tag=PUW31_00680;product=preprotein translocase subunit SecA;protein_id=WJH08877.1;transl_table=11 CP118128.1 Genbank gene 161361 161756 . + . ID=gene-PUW31_00685;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=PUW31_00685 CP118128.1 Protein Homology CDS 161361 161756 . + 0 ID=cds-WJH08878.1;Parent=gene-PUW31_00685;Dbxref=NCBI_GP:WJH08878.1;Name=WJH08878.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459142.1;locus_tag=PUW31_00685;product=8-oxo-dGTP diphosphatase MutT;protein_id=WJH08878.1;transl_table=11 CP118128.1 Genbank gene 161790 162779 . - . ID=gene-PUW31_00690;Name=PUW31_00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00690 CP118128.1 Protein Homology CDS 161790 162779 . - 0 ID=cds-WJH08879.1;Parent=gene-PUW31_00690;Dbxref=NCBI_GP:WJH08879.1;Name=WJH08879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200034.1;locus_tag=PUW31_00690;product=aldo/keto reductase;protein_id=WJH08879.1;transl_table=11 CP118128.1 Genbank gene 162865 163806 . + . ID=gene-PUW31_00695;Name=PUW31_00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00695 CP118128.1 Protein Homology CDS 162865 163806 . + 0 ID=cds-WJH08880.1;Parent=gene-PUW31_00695;Dbxref=NCBI_GP:WJH08880.1;Name=WJH08880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697068.1;locus_tag=PUW31_00695;product=LysR family transcriptional regulator;protein_id=WJH08880.1;transl_table=11 CP118128.1 Genbank gene 163803 163994 . - . ID=gene-PUW31_00700;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=PUW31_00700 CP118128.1 Protein Homology CDS 163803 163994 . - 0 ID=cds-WJH08881.1;Parent=gene-PUW31_00700;Dbxref=NCBI_GP:WJH08881.1;Name=WJH08881.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459143.1;locus_tag=PUW31_00700;product=DNA gyrase inhibitor YacG;protein_id=WJH08881.1;transl_table=11 CP118128.1 Genbank gene 164004 164747 . - . ID=gene-PUW31_00705;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=PUW31_00705 CP118128.1 Protein Homology CDS 164004 164747 . - 0 ID=cds-WJH08882.1;Parent=gene-PUW31_00705;Dbxref=NCBI_GP:WJH08882.1;Name=WJH08882.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459144.1;locus_tag=PUW31_00705;product=cell division protein ZapD;protein_id=WJH08882.1;transl_table=11 CP118128.1 Genbank gene 164747 165367 . - . ID=gene-PUW31_00710;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=PUW31_00710 CP118128.1 Protein Homology CDS 164747 165367 . - 0 ID=cds-WJH08883.1;Parent=gene-PUW31_00710;Dbxref=NCBI_GP:WJH08883.1;Name=WJH08883.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459145.1;locus_tag=PUW31_00710;product=dephospho-CoA kinase;protein_id=WJH08883.1;transl_table=11 CP118128.1 Genbank gene 165593 166636 . + . ID=gene-PUW31_00715;Name=PUW31_00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00715 CP118128.1 Protein Homology CDS 165593 166636 . + 0 ID=cds-WJH08884.1;Parent=gene-PUW31_00715;Dbxref=NCBI_GP:WJH08884.1;Name=WJH08884.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=PUW31_00715;product=GMP reductase;protein_id=WJH08884.1;transl_table=11 CP118128.1 Genbank gene 166667 167869 . - . ID=gene-PUW31_00720;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=PUW31_00720 CP118128.1 Protein Homology CDS 166667 167869 . - 0 ID=cds-WJH08885.1;Parent=gene-PUW31_00720;Dbxref=NCBI_GP:WJH08885.1;Name=WJH08885.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459147.1;locus_tag=PUW31_00720;product=protein transport protein HofC;protein_id=WJH08885.1;transl_table=11 CP118128.1 Genbank gene 167898 169244 . - . ID=gene-PUW31_00725;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=PUW31_00725 CP118128.1 Protein Homology CDS 167898 169244 . - 0 ID=cds-WJH08886.1;Parent=gene-PUW31_00725;Dbxref=NCBI_GP:WJH08886.1;Name=WJH08886.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459148.1;locus_tag=PUW31_00725;product=type II secretion system protein GspE;protein_id=WJH08886.1;transl_table=11 CP118128.1 Genbank gene 169254 169691 . - . ID=gene-PUW31_00730;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=PUW31_00730 CP118128.1 Protein Homology CDS 169254 169691 . - 0 ID=cds-WJH08887.1;Parent=gene-PUW31_00730;Dbxref=NCBI_GP:WJH08887.1;Name=WJH08887.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459149.1;locus_tag=PUW31_00730;product=prepilin peptidase-dependent pilin;protein_id=WJH08887.1;transl_table=11 CP118128.1 Genbank gene 169913 170806 . - . ID=gene-PUW31_00735;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=PUW31_00735 CP118128.1 Protein Homology CDS 169913 170806 . - 0 ID=cds-WJH08888.1;Parent=gene-PUW31_00735;Dbxref=NCBI_GP:WJH08888.1;Name=WJH08888.1;Ontology_term=GO:0019363,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=pyridine nucleotide biosynthetic process|0019363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459150.1;locus_tag=PUW31_00735;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WJH08888.1;transl_table=11 CP118128.1 Genbank gene 170894 171457 . + . ID=gene-PUW31_00740;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=PUW31_00740 CP118128.1 Protein Homology CDS 170894 171457 . + 0 ID=cds-WJH08889.1;Parent=gene-PUW31_00740;Dbxref=NCBI_GP:WJH08889.1;Name=WJH08889.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459151.1;locus_tag=PUW31_00740;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WJH08889.1;transl_table=11 CP118128.1 Genbank gene 171454 172308 . + . ID=gene-PUW31_00745;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=PUW31_00745 CP118128.1 Protein Homology CDS 171454 172308 . + 0 ID=cds-WJH08890.1;Parent=gene-PUW31_00745;Dbxref=NCBI_GP:WJH08890.1;Name=WJH08890.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459152.1;locus_tag=PUW31_00745;product=beta-lactamase regulator AmpE;protein_id=WJH08890.1;transl_table=11 CP118128.1 Genbank gene 172400 173350 . - . ID=gene-PUW31_00750;Name=PUW31_00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00750 CP118128.1 Protein Homology CDS 172400 173350 . - 0 ID=cds-WJH08891.1;Parent=gene-PUW31_00750;Dbxref=NCBI_GP:WJH08891.1;Name=WJH08891.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459153.1;locus_tag=PUW31_00750;product=family 43 glycosylhydrolase;protein_id=WJH08891.1;transl_table=11 CP118128.1 Genbank gene 173350 174756 . - . ID=gene-PUW31_00755;Name=PUW31_00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00755 CP118128.1 Protein Homology CDS 173350 174756 . - 0 ID=cds-WJH08892.1;Parent=gene-PUW31_00755;Dbxref=NCBI_GP:WJH08892.1;Name=WJH08892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459154.1;locus_tag=PUW31_00755;product=MFS transporter;protein_id=WJH08892.1;transl_table=11 CP118128.1 Genbank gene 174920 176293 . - . ID=gene-PUW31_00760;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=PUW31_00760 CP118128.1 Protein Homology CDS 174920 176293 . - 0 ID=cds-WJH10632.1;Parent=gene-PUW31_00760;Dbxref=NCBI_GP:WJH10632.1;Name=WJH10632.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459155.1;locus_tag=PUW31_00760;product=aromatic amino acid transporter AroP;protein_id=WJH10632.1;transl_table=11 CP118128.1 Genbank gene 176856 177608 . + . ID=gene-PUW31_00765;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=PUW31_00765 CP118128.1 Protein Homology CDS 176856 177608 . + 0 ID=cds-WJH08893.1;Parent=gene-PUW31_00765;Dbxref=NCBI_GP:WJH08893.1;Name=WJH08893.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331770.1;locus_tag=PUW31_00765;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WJH08893.1;transl_table=11 CP118128.1 Genbank gene 177780 180443 . + . ID=gene-PUW31_00770;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=PUW31_00770 CP118128.1 Protein Homology CDS 177780 180443 . + 0 ID=cds-WJH08894.1;Parent=gene-PUW31_00770;Dbxref=NCBI_GP:WJH08894.1;Name=WJH08894.1;Ontology_term=GO:0006086,GO:0004738,GO:0045250;gbkey=CDS;gene=aceE;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=PUW31_00770;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WJH08894.1;transl_table=11 CP118128.1 Genbank gene 180458 182341 . + . ID=gene-PUW31_00775;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=PUW31_00775 CP118128.1 Protein Homology CDS 180458 182341 . + 0 ID=cds-WJH08895.1;Parent=gene-PUW31_00775;Dbxref=NCBI_GP:WJH08895.1;Name=WJH08895.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459158.2;locus_tag=PUW31_00775;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WJH08895.1;transl_table=11 CP118128.1 Genbank gene 182543 183967 . + . ID=gene-PUW31_00780;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=PUW31_00780 CP118128.1 Protein Homology CDS 182543 183967 . + 0 ID=cds-WJH10633.1;Parent=gene-PUW31_00780;Dbxref=NCBI_GP:WJH10633.1;Name=WJH10633.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=PUW31_00780;product=dihydrolipoyl dehydrogenase;protein_id=WJH10633.1;transl_table=11 CP118128.1 Genbank gene 184256 184540 . + . ID=gene-PUW31_00785;Name=PUW31_00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00785 CP118128.1 Protein Homology CDS 184256 184540 . + 0 ID=cds-WJH08896.1;Parent=gene-PUW31_00785;Dbxref=NCBI_GP:WJH08896.1;Name=WJH08896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459160.1;locus_tag=PUW31_00785;product=hypothetical protein;protein_id=WJH08896.1;transl_table=11 CP118128.1 Genbank gene 184578 185369 . - . ID=gene-PUW31_00790;Name=PUW31_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00790 CP118128.1 Protein Homology CDS 184578 185369 . - 0 ID=cds-WJH08897.1;Parent=gene-PUW31_00790;Dbxref=NCBI_GP:WJH08897.1;Name=WJH08897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459161.1;locus_tag=PUW31_00790;product=DUF2950 family protein;protein_id=WJH08897.1;transl_table=11 CP118128.1 Genbank gene 185382 187004 . - . ID=gene-PUW31_00795;Name=PUW31_00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00795 CP118128.1 Protein Homology CDS 185382 187004 . - 0 ID=cds-WJH08898.1;Parent=gene-PUW31_00795;Dbxref=NCBI_GP:WJH08898.1;Name=WJH08898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459162.2;locus_tag=PUW31_00795;product=DUF3300 domain-containing protein;protein_id=WJH08898.1;transl_table=11 CP118128.1 Genbank pseudogene 187393 189989 . + . ID=gene-PUW31_00800;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=pseudogene;locus_tag=PUW31_00800;pseudo=true CP118128.1 Protein Homology CDS 187393 189989 . + 0 ID=cds-PUW31_00800;Parent=gene-PUW31_00800;Note=frameshifted;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnB;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080489.1;locus_tag=PUW31_00800;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 190029 190493 . - . ID=gene-PUW31_00805;Name=PUW31_00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00805 CP118128.1 Protein Homology CDS 190029 190493 . - 0 ID=cds-WJH08899.1;Parent=gene-PUW31_00805;Dbxref=NCBI_GP:WJH08899.1;Name=WJH08899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110434.1;locus_tag=PUW31_00805;product=hypothetical protein;protein_id=WJH08899.1;transl_table=11 CP118128.1 Genbank gene 190910 191233 . - . ID=gene-PUW31_00810;Name=PUW31_00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00810 CP118128.1 Protein Homology CDS 190910 191233 . - 0 ID=cds-WJH08900.1;Parent=gene-PUW31_00810;Dbxref=NCBI_GP:WJH08900.1;Name=WJH08900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101536.1;locus_tag=PUW31_00810;product=phosphotyrosine protein phosphatase;protein_id=WJH08900.1;transl_table=11 CP118128.1 Genbank gene 191504 191866 . + . ID=gene-PUW31_00815;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=PUW31_00815 CP118128.1 Protein Homology CDS 191504 191866 . + 0 ID=cds-WJH08901.1;Parent=gene-PUW31_00815;Dbxref=NCBI_GP:WJH08901.1;Name=WJH08901.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459165.1;locus_tag=PUW31_00815;product=protein YacL;protein_id=WJH08901.1;transl_table=11 CP118128.1 Genbank gene 192101 193054 . + . ID=gene-PUW31_00820;Name=PUW31_00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00820 CP118128.1 Protein Homology CDS 192101 193054 . + 0 ID=cds-WJH08902.1;Parent=gene-PUW31_00820;Dbxref=NCBI_GP:WJH08902.1;Name=WJH08902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459166.1;locus_tag=PUW31_00820;product=2-keto-3-deoxygluconate permease 1;protein_id=WJH08902.1;transl_table=11 CP118128.1 Genbank gene 193051 194322 . + . ID=gene-PUW31_00825;Name=PUW31_00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00825 CP118128.1 Protein Homology CDS 193051 194322 . + 0 ID=cds-WJH08903.1;Parent=gene-PUW31_00825;Dbxref=NCBI_GP:WJH08903.1;Name=WJH08903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459167.1;locus_tag=PUW31_00825;product=D-threonate kinase;protein_id=WJH08903.1;transl_table=11 CP118128.1 Genbank gene 194312 195295 . + . ID=gene-PUW31_00830;Name=PUW31_00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00830 CP118128.1 Protein Homology CDS 194312 195295 . + 0 ID=cds-WJH08904.1;Parent=gene-PUW31_00830;Dbxref=NCBI_GP:WJH08904.1;Name=WJH08904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459168.1;locus_tag=PUW31_00830;product=D-threonate 4-phosphate dehydrogenase;protein_id=WJH08904.1;transl_table=11 CP118128.1 Genbank gene 195305 196072 . + . ID=gene-PUW31_00835;Name=PUW31_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00835 CP118128.1 Protein Homology CDS 195305 196072 . + 0 ID=cds-WJH08905.1;Parent=gene-PUW31_00835;Dbxref=NCBI_GP:WJH08905.1;Name=WJH08905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459169.1;locus_tag=PUW31_00835;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WJH08905.1;transl_table=11 CP118128.1 Genbank gene 196102 196896 . - . ID=gene-PUW31_00840;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=PUW31_00840 CP118128.1 Protein Homology CDS 196102 196896 . - 0 ID=cds-WJH08906.1;Parent=gene-PUW31_00840;Dbxref=NCBI_GP:WJH08906.1;Name=WJH08906.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459170.1;locus_tag=PUW31_00840;product=adenosylmethionine decarboxylase;protein_id=WJH08906.1;transl_table=11 CP118128.1 Genbank gene 196917 197777 . - . ID=gene-PUW31_00845;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=PUW31_00845 CP118128.1 Protein Homology CDS 196917 197777 . - 0 ID=cds-WJH08907.1;Parent=gene-PUW31_00845;Dbxref=NCBI_GP:WJH08907.1;Name=WJH08907.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459171.1;locus_tag=PUW31_00845;product=polyamine aminopropyltransferase;protein_id=WJH08907.1;transl_table=11 CP118128.1 Genbank pseudogene 197884 198230 . - . ID=gene-PUW31_00850;Name=PUW31_00850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_00850;pseudo=true CP118128.1 Protein Homology CDS 197884 198230 . - 0 ID=cds-PUW31_00850;Parent=gene-PUW31_00850;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459172.1;locus_tag=PUW31_00850;product=YacC family pilotin-like protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 198432 200041 . + . ID=gene-PUW31_00855;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=pseudogene;locus_tag=PUW31_00855;pseudo=true CP118128.1 Protein Homology CDS 198432 200041 . + 0 ID=cds-PUW31_00855;Parent=gene-PUW31_00855;Note=frameshifted;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459173.1;locus_tag=PUW31_00855;product=multicopper oxidase CueO;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 200119 202509 . - . ID=gene-PUW31_00860;Name=PUW31_00860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_00860;pseudo=true CP118128.1 Protein Homology CDS 200119 202509 . - 0 ID=cds-PUW31_00860;Parent=gene-PUW31_00860;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459174.1;locus_tag=PUW31_00860;product=pyrroloquinoline quinone-dependent dehydrogenase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 202715 203251 . + . ID=gene-PUW31_00865;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=PUW31_00865 CP118128.1 Protein Homology CDS 202715 203251 . + 0 ID=cds-WJH08908.1;Parent=gene-PUW31_00865;Dbxref=NCBI_GP:WJH08908.1;Name=WJH08908.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=PUW31_00865;product=hypoxanthine phosphoribosyltransferase;protein_id=WJH08908.1;transl_table=11 CP118128.1 Genbank gene 203309 203971 . - . ID=gene-PUW31_00870;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=PUW31_00870 CP118128.1 Protein Homology CDS 203309 203971 . - 0 ID=cds-WJH08909.1;Parent=gene-PUW31_00870;Dbxref=NCBI_GP:WJH08909.1;Name=WJH08909.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459176.1;locus_tag=PUW31_00870;product=carbonate dehydratase;protein_id=WJH08909.1;transl_table=11 CP118128.1 Genbank gene 204080 205006 . + . ID=gene-PUW31_00875;Name=PUW31_00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00875 CP118128.1 Protein Homology CDS 204080 205006 . + 0 ID=cds-WJH08910.1;Parent=gene-PUW31_00875;Dbxref=NCBI_GP:WJH08910.1;Name=WJH08910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459177.1;locus_tag=PUW31_00875;product=ABC transporter ATP-binding protein;protein_id=WJH08910.1;transl_table=11 CP118128.1 Genbank gene 205003 205773 . + . ID=gene-PUW31_00880;Name=PUW31_00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00880 CP118128.1 Protein Homology CDS 205003 205773 . + 0 ID=cds-WJH08911.1;Parent=gene-PUW31_00880;Dbxref=NCBI_GP:WJH08911.1;Name=WJH08911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=PUW31_00880;product=ABC transporter permease;protein_id=WJH08911.1;transl_table=11 CP118128.1 Genbank gene 205893 206972 . - . ID=gene-PUW31_00885;Name=PUW31_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00885 CP118128.1 Protein Homology CDS 205893 206972 . - 0 ID=cds-WJH08912.1;Parent=gene-PUW31_00885;Dbxref=NCBI_GP:WJH08912.1;Name=WJH08912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459179.1;locus_tag=PUW31_00885;product=fimbrial protein;protein_id=WJH08912.1;transl_table=11 CP118128.1 Genbank pseudogene 206981 209527 . - . ID=gene-PUW31_00890;Name=PUW31_00890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_00890;pseudo=true CP118128.1 Protein Homology CDS 206981 209527 . - 0 ID=cds-PUW31_00890;Parent=gene-PUW31_00890;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459180.1;locus_tag=PUW31_00890;product=fimbrial outer membrane usher protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 209554 210237 . - . ID=gene-PUW31_00895;Name=stiB;gbkey=Gene;gene=stiB;gene_biotype=protein_coding;locus_tag=PUW31_00895 CP118128.1 Protein Homology CDS 209554 210237 . - 0 ID=cds-WJH08913.1;Parent=gene-PUW31_00895;Dbxref=NCBI_GP:WJH08913.1;Name=WJH08913.1;gbkey=CDS;gene=stiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459181.1;locus_tag=PUW31_00895;product=fimbrial biogenesis chaperone StiB;protein_id=WJH08913.1;transl_table=11 CP118128.1 Genbank gene 210285 210824 . - . ID=gene-PUW31_00900;Name=PUW31_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00900 CP118128.1 Protein Homology CDS 210285 210824 . - 0 ID=cds-WJH08914.1;Parent=gene-PUW31_00900;Dbxref=NCBI_GP:WJH08914.1;Name=WJH08914.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459182.1;locus_tag=PUW31_00900;product=fimbrial protein;protein_id=WJH08914.1;transl_table=11 CP118128.1 Genbank pseudogene 211194 211623 . + . ID=gene-PUW31_00905;Name=PUW31_00905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_00905;pseudo=true CP118128.1 Protein Homology CDS 211194 211623 . + 0 ID=cds-PUW31_00905;Parent=gene-PUW31_00905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459183.1;locus_tag=PUW31_00905;product=PTS sugar transporter subunit IIA;pseudo=true;transl_table=11 CP118128.1 Genbank gene 211685 212914 . + . ID=gene-PUW31_00910;Name=PUW31_00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00910 CP118128.1 Protein Homology CDS 211685 212914 . + 0 ID=cds-WJH08915.1;Parent=gene-PUW31_00910;Dbxref=NCBI_GP:WJH08915.1;Name=WJH08915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459184.1;locus_tag=PUW31_00910;product=polysaccharide deacetylase family protein;protein_id=WJH08915.1;transl_table=11 CP118128.1 Genbank gene 212921 213301 . - . ID=gene-PUW31_00915;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=PUW31_00915 CP118128.1 Protein Homology CDS 212921 213301 . - 0 ID=cds-WJH08916.1;Parent=gene-PUW31_00915;Dbxref=NCBI_GP:WJH08916.1;Name=WJH08916.1;Ontology_term=GO:0015940,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=PUW31_00915;product=aspartate 1-decarboxylase;protein_id=WJH08916.1;transl_table=11 CP118128.1 Genbank pseudogene 213396 214249 . - . ID=gene-PUW31_00920;Name=panC;gbkey=Gene;gene=panC;gene_biotype=pseudogene;locus_tag=PUW31_00920;pseudo=true CP118128.1 Protein Homology CDS 213396 214249 . - 0 ID=cds-PUW31_00920;Parent=gene-PUW31_00920;Note=frameshifted;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459186.1;locus_tag=PUW31_00920;product=pantoate--beta-alanine ligase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 214375 215166 . - . ID=gene-PUW31_00925;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=PUW31_00925 CP118128.1 Protein Homology CDS 214375 215166 . - 0 ID=cds-WJH08917.1;Parent=gene-PUW31_00925;Dbxref=NCBI_GP:WJH08917.1;Name=WJH08917.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=PUW31_00925;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WJH08917.1;transl_table=11 CP118128.1 Genbank gene 215287 215766 . - . ID=gene-PUW31_00930;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=PUW31_00930 CP118128.1 Protein Homology CDS 215287 215766 . - 0 ID=cds-WJH08918.1;Parent=gene-PUW31_00930;Dbxref=NCBI_GP:WJH08918.1;Name=WJH08918.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459188.1;locus_tag=PUW31_00930;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WJH08918.1;transl_table=11 CP118128.1 Genbank gene 215763 217160 . - . ID=gene-PUW31_00935;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=PUW31_00935 CP118128.1 Protein Homology CDS 215763 217160 . - 0 ID=cds-WJH10634.1;Parent=gene-PUW31_00935;Dbxref=NCBI_GP:WJH10634.1;Name=WJH10634.1;Ontology_term=GO:0006378,GO:0003723,GO:0004652;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,polynucleotide adenylyltransferase activity|0004652||IEA;go_process=mRNA polyadenylation|0006378||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=PUW31_00935;product=polynucleotide adenylyltransferase PcnB;protein_id=WJH10634.1;transl_table=11 CP118128.1 Genbank gene 217322 218218 . - . ID=gene-PUW31_00940;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=PUW31_00940 CP118128.1 Protein Homology CDS 217322 218218 . - 0 ID=cds-WJH08919.1;Parent=gene-PUW31_00940;Dbxref=NCBI_GP:WJH08919.1;Name=WJH08919.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549989.1;locus_tag=PUW31_00940;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WJH08919.1;transl_table=11 CP118128.1 Genbank gene 218287 218742 . - . ID=gene-PUW31_00945;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=PUW31_00945 CP118128.1 Protein Homology CDS 218287 218742 . - 0 ID=cds-WJH08920.1;Parent=gene-PUW31_00945;Dbxref=NCBI_GP:WJH08920.1;Name=WJH08920.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=PUW31_00945;product=RNA polymerase-binding protein DksA;protein_id=WJH08920.1;transl_table=11 CP118128.1 Genbank gene 218919 219623 . - . ID=gene-PUW31_00950;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=PUW31_00950 CP118128.1 Protein Homology CDS 218919 219623 . - 0 ID=cds-WJH08921.1;Parent=gene-PUW31_00950;Dbxref=NCBI_GP:WJH08921.1;Name=WJH08921.1;Ontology_term=GO:0000023,GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;go_process=maltose metabolic process|0000023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459192.1;locus_tag=PUW31_00950;product=DNA/RNA nuclease SfsA;protein_id=WJH08921.1;transl_table=11 CP118128.1 Genbank gene 219640 220170 . - . ID=gene-PUW31_00955;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=PUW31_00955 CP118128.1 Protein Homology CDS 219640 220170 . - 0 ID=cds-WJH08922.1;Parent=gene-PUW31_00955;Dbxref=NCBI_GP:WJH08922.1;Name=WJH08922.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,2'-5'-RNA ligase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459193.1;locus_tag=PUW31_00955;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WJH08922.1;transl_table=11 CP118128.1 Genbank pseudogene 220243 222671 . + . ID=gene-PUW31_00960;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=pseudogene;locus_tag=PUW31_00960;pseudo=true CP118128.1 Protein Homology CDS 220243 222671 . + 0 ID=cds-PUW31_00960;Parent=gene-PUW31_00960;Note=frameshifted;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308179.2;locus_tag=PUW31_00960;product=ATP-dependent helicase HrpB;pseudo=true;transl_table=11 CP118128.1 Genbank gene 222812 225334 . + . ID=gene-PUW31_00965;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=PUW31_00965 CP118128.1 Protein Homology CDS 222812 225334 . + 0 ID=cds-WJH08923.1;Parent=gene-PUW31_00965;Dbxref=NCBI_GP:WJH08923.1;Name=WJH08923.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459195.1;locus_tag=PUW31_00965;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WJH08923.1;transl_table=11 CP118128.1 Genbank gene 225627 227816 . + . ID=gene-PUW31_00970;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=PUW31_00970 CP118128.1 Protein Homology CDS 225627 227816 . + 0 ID=cds-WJH08924.1;Parent=gene-PUW31_00970;Dbxref=NCBI_GP:WJH08924.1;Name=WJH08924.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459196.1;locus_tag=PUW31_00970;product=ferrichrome porin FhuA;protein_id=WJH08924.1;transl_table=11 CP118128.1 Genbank gene 227865 228662 . + . ID=gene-PUW31_00975;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=PUW31_00975 CP118128.1 Protein Homology CDS 227865 228662 . + 0 ID=cds-WJH08925.1;Parent=gene-PUW31_00975;Dbxref=NCBI_GP:WJH08925.1;Name=WJH08925.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459197.1;locus_tag=PUW31_00975;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WJH08925.1;transl_table=11 CP118128.1 Genbank gene 228662 229552 . + . ID=gene-PUW31_00980;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=PUW31_00980 CP118128.1 Protein Homology CDS 228662 229552 . + 0 ID=cds-WJH08926.1;Parent=gene-PUW31_00980;Dbxref=NCBI_GP:WJH08926.1;Name=WJH08926.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459198.1;locus_tag=PUW31_00980;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WJH08926.1;transl_table=11 CP118128.1 Genbank pseudogene 229567 231605 . + . ID=gene-PUW31_00985;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=pseudogene;locus_tag=PUW31_00985;pseudo=true CP118128.1 Protein Homology CDS 229567 231605 . + 0 ID=cds-PUW31_00985;Parent=gene-PUW31_00985;Note=frameshifted;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504759.1;locus_tag=PUW31_00985;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;pseudo=true;transl_table=11 CP118128.1 Genbank gene 232545 233105 . + . ID=gene-PUW31_00990;Name=stfA;gbkey=Gene;gene=stfA;gene_biotype=protein_coding;locus_tag=PUW31_00990 CP118128.1 Protein Homology CDS 232545 233105 . + 0 ID=cds-WJH08927.1;Parent=gene-PUW31_00990;Dbxref=NCBI_GP:WJH08927.1;Name=WJH08927.1;gbkey=CDS;gene=stfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459200.1;locus_tag=PUW31_00990;product=fimbrial major subunit StfA;protein_id=WJH08927.1;transl_table=11 CP118128.1 Genbank gene 233191 235848 . + . ID=gene-PUW31_00995;Name=PUW31_00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_00995 CP118128.1 Protein Homology CDS 233191 235848 . + 0 ID=cds-WJH08928.1;Parent=gene-PUW31_00995;Dbxref=NCBI_GP:WJH08928.1;Name=WJH08928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459201.1;locus_tag=PUW31_00995;product=fimbrial biogenesis outer membrane usher protein;protein_id=WJH08928.1;transl_table=11 CP118128.1 Genbank gene 235866 236618 . + . ID=gene-PUW31_01000;Name=stfD;gbkey=Gene;gene=stfD;gene_biotype=protein_coding;locus_tag=PUW31_01000 CP118128.1 Protein Homology CDS 235866 236618 . + 0 ID=cds-WJH08929.1;Parent=gene-PUW31_01000;Dbxref=NCBI_GP:WJH08929.1;Name=WJH08929.1;gbkey=CDS;gene=stfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459202.1;locus_tag=PUW31_01000;product=fimbrial chaperone StfD;protein_id=WJH08929.1;transl_table=11 CP118128.1 Genbank gene 236637 237149 . + . ID=gene-PUW31_01005;Name=PUW31_01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01005 CP118128.1 Protein Homology CDS 236637 237149 . + 0 ID=cds-WJH08930.1;Parent=gene-PUW31_01005;Dbxref=NCBI_GP:WJH08930.1;Name=WJH08930.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459203.1;locus_tag=PUW31_01005;product=fimbrial protein;protein_id=WJH08930.1;transl_table=11 CP118128.1 Genbank pseudogene 237146 237622 . + . ID=gene-PUW31_01010;Name=stfF;gbkey=Gene;gene=stfF;gene_biotype=pseudogene;locus_tag=PUW31_01010;pseudo=true CP118128.1 Protein Homology CDS 237146 237622 . + 0 ID=cds-PUW31_01010;Parent=gene-PUW31_01010;Note=internal stop;gbkey=CDS;gene=stfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459204.1;locus_tag=PUW31_01010;product=fimbrial minor subunit StfF;pseudo=true;transl_table=11 CP118128.1 Genbank gene 237622 238152 . + . ID=gene-PUW31_01015;Name=PUW31_01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01015 CP118128.1 Protein Homology CDS 237622 238152 . + 0 ID=cds-WJH08931.1;Parent=gene-PUW31_01015;Dbxref=NCBI_GP:WJH08931.1;Name=WJH08931.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459205.1;locus_tag=PUW31_01015;product=fimbrial protein;protein_id=WJH08931.1;transl_table=11 CP118128.1 Genbank pseudogene 238152 238993 . + . ID=gene-PUW31_01020;Name=stfH;gbkey=Gene;gene=stfH;gene_biotype=pseudogene;locus_tag=PUW31_01020;pseudo=true CP118128.1 Protein Homology CDS 238152 238993 . + 0 ID=cds-PUW31_01020;Parent=gene-PUW31_01020;Note=frameshifted%3B internal stop;gbkey=CDS;gene=stfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459206.1;locus_tag=PUW31_01020;product=fimbrial adhesin StfH;pseudo=true;transl_table=11 CP118128.1 Genbank gene 239101 240381 . - . ID=gene-PUW31_01025;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=PUW31_01025 CP118128.1 Protein Homology CDS 239101 240381 . - 0 ID=cds-WJH08932.1;Parent=gene-PUW31_01025;Dbxref=NCBI_GP:WJH08932.1;Name=WJH08932.1;Ontology_term=GO:0006779,GO:0042286,GO:0005737;gbkey=CDS;gene=hemL;go_component=cytoplasm|0005737||IEA;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=PUW31_01025;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WJH08932.1;transl_table=11 CP118128.1 Genbank gene 240551 241972 . + . ID=gene-PUW31_01030;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=PUW31_01030 CP118128.1 Protein Homology CDS 240551 241972 . + 0 ID=cds-WJH08933.1;Parent=gene-PUW31_01030;Dbxref=NCBI_GP:WJH08933.1;Name=WJH08933.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459208.1;locus_tag=PUW31_01030;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WJH08933.1;transl_table=11 CP118128.1 Genbank gene 242054 242398 . + . ID=gene-PUW31_01035;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=PUW31_01035 CP118128.1 Protein Homology CDS 242054 242398 . + 0 ID=cds-WJH08934.1;Parent=gene-PUW31_01035;Dbxref=NCBI_GP:WJH08934.1;Name=WJH08934.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=PUW31_01035;product=iron-sulfur cluster insertion protein ErpA;protein_id=WJH08934.1;transl_table=11 CP118128.1 Genbank gene 242499 243122 . - . ID=gene-PUW31_01040;Name=PUW31_01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01040 CP118128.1 Protein Homology CDS 242499 243122 . - 0 ID=cds-WJH08935.1;Parent=gene-PUW31_01040;Dbxref=NCBI_GP:WJH08935.1;Name=WJH08935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459210.1;locus_tag=PUW31_01040;product=TRIC cation channel family protein;protein_id=WJH08935.1;transl_table=11 CP118128.1 Genbank gene 243159 243959 . - . ID=gene-PUW31_01045;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=PUW31_01045 CP118128.1 Protein Homology CDS 243159 243959 . - 0 ID=cds-WJH08936.1;Parent=gene-PUW31_01045;Dbxref=NCBI_GP:WJH08936.1;Name=WJH08936.1;Ontology_term=GO:0005524;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459211.1;locus_tag=PUW31_01045;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WJH08936.1;transl_table=11 CP118128.1 Genbank gene 243952 244650 . - . ID=gene-PUW31_01050;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=PUW31_01050 CP118128.1 Protein Homology CDS 243952 244650 . - 0 ID=cds-WJH08937.1;Parent=gene-PUW31_01050;Dbxref=NCBI_GP:WJH08937.1;Name=WJH08937.1;Ontology_term=GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459212.1;locus_tag=PUW31_01050;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WJH08937.1;transl_table=11 CP118128.1 Genbank gene 244735 246252 . + . ID=gene-PUW31_01055;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=PUW31_01055 CP118128.1 Protein Homology CDS 244735 246252 . + 0 ID=cds-WJH08938.1;Parent=gene-PUW31_01055;Dbxref=NCBI_GP:WJH08938.1;Name=WJH08938.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459213.1;locus_tag=PUW31_01055;product=dGTPase;protein_id=WJH08938.1;transl_table=11 CP118128.1 Genbank gene 246382 247809 . + . ID=gene-PUW31_01060;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=PUW31_01060 CP118128.1 Protein Homology CDS 246382 247809 . + 0 ID=cds-WJH08939.1;Parent=gene-PUW31_01060;Dbxref=NCBI_GP:WJH08939.1;Name=WJH08939.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=PUW31_01060;product=serine endoprotease DegP;protein_id=WJH08939.1;transl_table=11 CP118128.1 Genbank gene 247962 249119 . + . ID=gene-PUW31_01065;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=PUW31_01065 CP118128.1 Protein Homology CDS 247962 249119 . + 0 ID=cds-WJH08940.1;Parent=gene-PUW31_01065;Dbxref=NCBI_GP:WJH08940.1;Name=WJH08940.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459215.1;locus_tag=PUW31_01065;product=DNA-binding transcriptional regulator CdaR;protein_id=WJH08940.1;transl_table=11 CP118128.1 Genbank gene 249208 249594 . - . ID=gene-PUW31_01070;Name=PUW31_01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01070 CP118128.1 Protein Homology CDS 249208 249594 . - 0 ID=cds-WJH08941.1;Parent=gene-PUW31_01070;Dbxref=NCBI_GP:WJH08941.1;Name=WJH08941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=PUW31_01070;product=DUF3461 family protein;protein_id=WJH08941.1;transl_table=11 CP118128.1 Genbank gene 249841 251142 . + . ID=gene-PUW31_01075;Name=PUW31_01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01075 CP118128.1 Protein Homology CDS 249841 251142 . + 0 ID=cds-WJH08942.1;Parent=gene-PUW31_01075;Dbxref=NCBI_GP:WJH08942.1;Name=WJH08942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=PUW31_01075;product=MFS transporter;protein_id=WJH08942.1;transl_table=11 CP118128.1 Genbank gene 251179 252003 . - . ID=gene-PUW31_01080;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=PUW31_01080 CP118128.1 Protein Homology CDS 251179 252003 . - 0 ID=cds-WJH08943.1;Parent=gene-PUW31_01080;Dbxref=NCBI_GP:WJH08943.1;Name=WJH08943.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=PUW31_01080;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WJH08943.1;transl_table=11 CP118128.1 Genbank gene 252033 254705 . - . ID=gene-PUW31_01085;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=PUW31_01085 CP118128.1 Protein Homology CDS 252033 254705 . - 0 ID=cds-WJH08944.1;Parent=gene-PUW31_01085;Dbxref=NCBI_GP:WJH08944.1;Name=WJH08944.1;Ontology_term=GO:0006807,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459219.1;locus_tag=PUW31_01085;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WJH08944.1;transl_table=11 CP118128.1 Genbank gene 254943 255737 . - . ID=gene-PUW31_01090;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=PUW31_01090 CP118128.1 Protein Homology CDS 254943 255737 . - 0 ID=cds-WJH08945.1;Parent=gene-PUW31_01090;Dbxref=NCBI_GP:WJH08945.1;Name=WJH08945.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459220.1;locus_tag=PUW31_01090;product=type I methionyl aminopeptidase;protein_id=WJH08945.1;transl_table=11 CP118128.1 Genbank gene 256188 256913 . + . ID=gene-PUW31_01095;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=PUW31_01095 CP118128.1 Protein Homology CDS 256188 256913 . + 0 ID=cds-WJH08946.1;Parent=gene-PUW31_01095;Dbxref=NCBI_GP:WJH08946.1;Name=WJH08946.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=PUW31_01095;product=30S ribosomal protein S2;protein_id=WJH08946.1;transl_table=11 CP118128.1 Genbank gene 257171 258022 . + . ID=gene-PUW31_01100;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=PUW31_01100 CP118128.1 Protein Homology CDS 257171 258022 . + 0 ID=cds-WJH08947.1;Parent=gene-PUW31_01100;Dbxref=NCBI_GP:WJH08947.1;Name=WJH08947.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=PUW31_01100;product=translation elongation factor Ts;protein_id=WJH08947.1;transl_table=11 CP118128.1 Genbank gene 258167 258892 . + . ID=gene-PUW31_01105;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=PUW31_01105 CP118128.1 Protein Homology CDS 258167 258892 . + 0 ID=cds-WJH08948.1;Parent=gene-PUW31_01105;Dbxref=NCBI_GP:WJH08948.1;Name=WJH08948.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=PUW31_01105;product=UMP kinase;protein_id=WJH08948.1;transl_table=11 CP118128.1 Genbank gene 259039 259596 . + . ID=gene-PUW31_01110;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=PUW31_01110 CP118128.1 Protein Homology CDS 259039 259596 . + 0 ID=cds-WJH08949.1;Parent=gene-PUW31_01110;Dbxref=NCBI_GP:WJH08949.1;Name=WJH08949.1;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=PUW31_01110;product=ribosome recycling factor;protein_id=WJH08949.1;transl_table=11 CP118128.1 Genbank gene 259738 260934 . + . ID=gene-PUW31_01115;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=PUW31_01115 CP118128.1 Protein Homology CDS 259738 260934 . + 0 ID=cds-WJH08950.1;Parent=gene-PUW31_01115;Dbxref=NCBI_GP:WJH08950.1;Name=WJH08950.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459225.1;locus_tag=PUW31_01115;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WJH08950.1;transl_table=11 CP118128.1 Genbank gene 261247 262005 . + . ID=gene-PUW31_01120;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=PUW31_01120 CP118128.1 Protein Homology CDS 261247 262005 . + 0 ID=cds-WJH08951.1;Parent=gene-PUW31_01120;Dbxref=NCBI_GP:WJH08951.1;Name=WJH08951.1;Ontology_term=GO:0043164,GO:0002094,GO:0008834;gbkey=CDS;gene=ispU;go_function=polyprenyltransferase activity|0002094||IEA,di-trans%2Cpoly-cis-decaprenylcistransferase activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459226.1;locus_tag=PUW31_01120;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WJH08951.1;transl_table=11 CP118128.1 Genbank gene 262018 262875 . + . ID=gene-PUW31_01125;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=PUW31_01125 CP118128.1 Protein Homology CDS 262018 262875 . + 0 ID=cds-WJH08952.1;Parent=gene-PUW31_01125;Dbxref=NCBI_GP:WJH08952.1;Name=WJH08952.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459227.1;locus_tag=PUW31_01125;product=phosphatidate cytidylyltransferase;protein_id=WJH08952.1;transl_table=11 CP118128.1 Genbank gene 262887 264239 . + . ID=gene-PUW31_01130;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=PUW31_01130 CP118128.1 Protein Homology CDS 262887 264239 . + 0 ID=cds-WJH08953.1;Parent=gene-PUW31_01130;Dbxref=NCBI_GP:WJH08953.1;Name=WJH08953.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=PUW31_01130;product=sigma E protease regulator RseP;protein_id=WJH08953.1;transl_table=11 CP118128.1 Genbank gene 264271 266703 . + . ID=gene-PUW31_01135;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=PUW31_01135 CP118128.1 Protein Homology CDS 264271 266703 . + 0 ID=cds-WJH08954.1;Parent=gene-PUW31_01135;Dbxref=NCBI_GP:WJH08954.1;Name=WJH08954.1;Ontology_term=GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308206.1;locus_tag=PUW31_01135;product=outer membrane protein assembly factor BamA;protein_id=WJH08954.1;transl_table=11 CP118128.1 Genbank gene 266826 267311 . + . ID=gene-PUW31_01140;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=PUW31_01140 CP118128.1 Protein Homology CDS 266826 267311 . + 0 ID=cds-WJH08955.1;Parent=gene-PUW31_01140;Dbxref=NCBI_GP:WJH08955.1;Name=WJH08955.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459230.1;locus_tag=PUW31_01140;product=molecular chaperone Skp;protein_id=WJH08955.1;transl_table=11 CP118128.1 Genbank gene 267315 268340 . + . ID=gene-PUW31_01145;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=PUW31_01145 CP118128.1 Protein Homology CDS 267315 268340 . + 0 ID=cds-WJH08956.1;Parent=gene-PUW31_01145;Dbxref=NCBI_GP:WJH08956.1;Name=WJH08956.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=PUW31_01145;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WJH08956.1;transl_table=11 CP118128.1 Genbank gene 268446 268901 . + . ID=gene-PUW31_01150;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=PUW31_01150 CP118128.1 Protein Homology CDS 268446 268901 . + 0 ID=cds-WJH08957.1;Parent=gene-PUW31_01150;Dbxref=NCBI_GP:WJH08957.1;Name=WJH08957.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=PUW31_01150;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WJH08957.1;transl_table=11 CP118128.1 Genbank gene 268905 269693 . + . ID=gene-PUW31_01155;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=PUW31_01155 CP118128.1 Protein Homology CDS 268905 269693 . + 0 ID=cds-WJH08958.1;Parent=gene-PUW31_01155;Dbxref=NCBI_GP:WJH08958.1;Name=WJH08958.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=PUW31_01155;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WJH08958.1;transl_table=11 CP118128.1 Genbank gene 269693 270841 . + . ID=gene-PUW31_01160;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=PUW31_01160 CP118128.1 Protein Homology CDS 269693 270841 . + 0 ID=cds-WJH08959.1;Parent=gene-PUW31_01160;Dbxref=NCBI_GP:WJH08959.1;Name=WJH08959.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459234.1;locus_tag=PUW31_01160;product=lipid-A-disaccharide synthase;protein_id=WJH08959.1;transl_table=11 CP118128.1 Genbank gene 270838 271434 . + . ID=gene-PUW31_01165;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=PUW31_01165 CP118128.1 Protein Homology CDS 270838 271434 . + 0 ID=cds-WJH08960.1;Parent=gene-PUW31_01165;Dbxref=NCBI_GP:WJH08960.1;Name=WJH08960.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459235.1;locus_tag=PUW31_01165;product=ribonuclease HII;protein_id=WJH08960.1;transl_table=11 CP118128.1 Genbank gene 271458 274940 . + . ID=gene-PUW31_01170;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=PUW31_01170 CP118128.1 Protein Homology CDS 271458 274940 . + 0 ID=cds-WJH08961.1;Parent=gene-PUW31_01170;Dbxref=NCBI_GP:WJH08961.1;Name=WJH08961.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459236.1;locus_tag=PUW31_01170;product=DNA polymerase III subunit alpha;protein_id=WJH08961.1;transl_table=11 CP118128.1 Genbank gene 274953 275912 . + . ID=gene-PUW31_01175;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=PUW31_01175 CP118128.1 Protein Homology CDS 274953 275912 . + 0 ID=cds-WJH08962.1;Parent=gene-PUW31_01175;Dbxref=NCBI_GP:WJH08962.1;Name=WJH08962.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=PUW31_01175;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WJH08962.1;transl_table=11 CP118128.1 Genbank gene 276141 277856 . + . ID=gene-PUW31_01180;Name=PUW31_01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01180 CP118128.1 Protein Homology CDS 276141 277856 . + 0 ID=cds-WJH10635.1;Parent=gene-PUW31_01180;Dbxref=NCBI_GP:WJH10635.1;Name=WJH10635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007718136.1;locus_tag=PUW31_01180;product=PKD domain-containing protein;protein_id=WJH10635.1;transl_table=11 CP118128.1 Genbank gene 277932 280073 . + . ID=gene-PUW31_01185;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=PUW31_01185 CP118128.1 Protein Homology CDS 277932 280073 . + 0 ID=cds-WJH08963.1;Parent=gene-PUW31_01185;Dbxref=NCBI_GP:WJH08963.1;Name=WJH08963.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459239.1;locus_tag=PUW31_01185;product=lysine decarboxylase LdcC;protein_id=WJH08963.1;transl_table=11 CP118128.1 Genbank gene 280129 280518 . + . ID=gene-PUW31_01190;Name=PUW31_01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01190 CP118128.1 Protein Homology CDS 280129 280518 . + 0 ID=cds-WJH08964.1;Parent=gene-PUW31_01190;Dbxref=NCBI_GP:WJH08964.1;Name=WJH08964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459240.1;locus_tag=PUW31_01190;product=VOC family protein;protein_id=WJH08964.1;transl_table=11 CP118128.1 Genbank gene 280581 281873 . + . ID=gene-PUW31_01195;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=PUW31_01195 CP118128.1 Protein Homology CDS 280581 281873 . + 0 ID=cds-WJH08965.1;Parent=gene-PUW31_01195;Dbxref=NCBI_GP:WJH08965.1;Name=WJH08965.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459241.1;locus_tag=PUW31_01195;product=tRNA lysidine(34) synthetase TilS;protein_id=WJH08965.1;transl_table=11 CP118128.1 Genbank gene 281957 282217 . - . ID=gene-PUW31_01200;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=PUW31_01200 CP118128.1 Protein Homology CDS 281957 282217 . - 0 ID=cds-WJH08966.1;Parent=gene-PUW31_01200;Dbxref=NCBI_GP:WJH08966.1;Name=WJH08966.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459242.1;locus_tag=PUW31_01200;product=Rho-binding antiterminator;protein_id=WJH08966.1;transl_table=11 CP118128.1 Genbank gene 282204 282404 . - . ID=gene-PUW31_01205;Name=PUW31_01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01205 CP118128.1 Protein Homology CDS 282204 282404 . - 0 ID=cds-WJH08967.1;Parent=gene-PUW31_01205;Dbxref=NCBI_GP:WJH08967.1;Name=WJH08967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=PUW31_01205;product=YaeP family protein;protein_id=WJH08967.1;transl_table=11 CP118128.1 Genbank gene 282602 283147 . + . ID=gene-PUW31_01210;Name=PUW31_01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01210 CP118128.1 Protein Homology CDS 282602 283147 . + 0 ID=cds-WJH08968.1;Parent=gene-PUW31_01210;Dbxref=NCBI_GP:WJH08968.1;Name=WJH08968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459244.1;locus_tag=PUW31_01210;product=YaeQ family protein;protein_id=WJH08968.1;transl_table=11 CP118128.1 Genbank gene 283144 283566 . + . ID=gene-PUW31_01215;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=PUW31_01215 CP118128.1 Protein Homology CDS 283144 283566 . + 0 ID=cds-WJH08969.1;Parent=gene-PUW31_01215;Dbxref=NCBI_GP:WJH08969.1;Name=WJH08969.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459245.1;locus_tag=PUW31_01215;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WJH08969.1;transl_table=11 CP118128.1 Genbank gene 283598 284299 . + . ID=gene-PUW31_01220;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=PUW31_01220 CP118128.1 Protein Homology CDS 283598 284299 . + 0 ID=cds-WJH08970.1;Parent=gene-PUW31_01220;Dbxref=NCBI_GP:WJH08970.1;Name=WJH08970.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006899150.1;locus_tag=PUW31_01220;product=envelope stress response activation lipoprotein NlpE;protein_id=WJH08970.1;transl_table=11 CP118128.1 Genbank gene 284373 286091 . - . ID=gene-PUW31_01225;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=PUW31_01225 CP118128.1 Protein Homology CDS 284373 286091 . - 0 ID=cds-WJH08971.1;Parent=gene-PUW31_01225;Dbxref=NCBI_GP:WJH08971.1;Name=WJH08971.1;Ontology_term=GO:0006433,GO:0004827,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=PUW31_01225;product=proline--tRNA ligase;protein_id=WJH08971.1;transl_table=11 CP118128.1 Genbank gene 286202 286909 . - . ID=gene-PUW31_01230;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=PUW31_01230 CP118128.1 Protein Homology CDS 286202 286909 . - 0 ID=cds-WJH08972.1;Parent=gene-PUW31_01230;Dbxref=NCBI_GP:WJH08972.1;Name=WJH08972.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459247.1;locus_tag=PUW31_01230;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WJH08972.1;transl_table=11 CP118128.1 Genbank gene 286906 287310 . - . ID=gene-PUW31_01235;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=PUW31_01235 CP118128.1 Protein Homology CDS 286906 287310 . - 0 ID=cds-WJH08973.1;Parent=gene-PUW31_01235;Dbxref=NCBI_GP:WJH08973.1;Name=WJH08973.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459248.1;locus_tag=PUW31_01235;product=Rcs stress response system protein RcsF;protein_id=WJH08973.1;transl_table=11 CP118128.1 Genbank gene 287429 288244 . - . ID=gene-PUW31_01240;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=PUW31_01240 CP118128.1 Protein Homology CDS 287429 288244 . - 0 ID=cds-WJH08974.1;Parent=gene-PUW31_01240;Dbxref=NCBI_GP:WJH08974.1;Name=WJH08974.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459249.1;locus_tag=PUW31_01240;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WJH08974.1;transl_table=11 CP118128.1 Genbank gene 288283 288936 . - . ID=gene-PUW31_01245;Name=PUW31_01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01245 CP118128.1 Protein Homology CDS 288283 288936 . - 0 ID=cds-WJH08975.1;Parent=gene-PUW31_01245;Dbxref=NCBI_GP:WJH08975.1;Name=WJH08975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=PUW31_01245;product=methionine ABC transporter permease MetI;protein_id=WJH08975.1;transl_table=11 CP118128.1 Genbank gene 288929 289960 . - . ID=gene-PUW31_01250;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=PUW31_01250 CP118128.1 Protein Homology CDS 288929 289960 . - 0 ID=cds-WJH08976.1;Parent=gene-PUW31_01250;Dbxref=NCBI_GP:WJH08976.1;Name=WJH08976.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009898,GO:0055052;gbkey=CDS;gene=metN;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=PUW31_01250;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WJH08976.1;transl_table=11 CP118128.1 Genbank gene 290150 290716 . + . ID=gene-PUW31_01255;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=PUW31_01255 CP118128.1 Protein Homology CDS 290150 290716 . + 0 ID=cds-WJH08977.1;Parent=gene-PUW31_01255;Dbxref=NCBI_GP:WJH08977.1;Name=WJH08977.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459252.1;locus_tag=PUW31_01255;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WJH08977.1;transl_table=11 CP118128.1 Genbank gene 291084 292625 . + . ID=gene-PUW31_01260;Name=PUW31_01260;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW31_01260 CP118128.1 cmsearch rRNA 291084 292625 . + . ID=rna-PUW31_01260;Parent=gene-PUW31_01260;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_01260;product=16S ribosomal RNA CP118128.1 cmsearch exon 291084 292625 . + . ID=exon-PUW31_01260-1;Parent=rna-PUW31_01260;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_01260;product=16S ribosomal RNA CP118128.1 Genbank gene 292695 292771 . + . ID=gene-PUW31_01265;Name=PUW31_01265;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_01265 CP118128.1 tRNAscan-SE tRNA 292695 292771 . + . ID=rna-PUW31_01265;Parent=gene-PUW31_01265;anticodon=(pos:292729..292731);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_01265;product=tRNA-Ile CP118128.1 tRNAscan-SE exon 292695 292771 . + . ID=exon-PUW31_01265-1;Parent=rna-PUW31_01265;anticodon=(pos:292729..292731);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_01265;product=tRNA-Ile CP118128.1 Genbank gene 292883 292958 . + . ID=gene-PUW31_01270;Name=PUW31_01270;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_01270 CP118128.1 tRNAscan-SE tRNA 292883 292958 . + . ID=rna-PUW31_01270;Parent=gene-PUW31_01270;anticodon=(pos:292916..292918);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_01270;product=tRNA-Ala CP118128.1 tRNAscan-SE exon 292883 292958 . + . ID=exon-PUW31_01270-1;Parent=rna-PUW31_01270;anticodon=(pos:292916..292918);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_01270;product=tRNA-Ala CP118128.1 Genbank gene 293141 296129 . + . ID=gene-PUW31_01275;Name=PUW31_01275;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW31_01275 CP118128.1 cmsearch rRNA 293141 296129 . + . ID=rna-PUW31_01275;Parent=gene-PUW31_01275;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_01275;product=23S ribosomal RNA CP118128.1 cmsearch exon 293141 296129 . + . ID=exon-PUW31_01275-1;Parent=rna-PUW31_01275;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_01275;product=23S ribosomal RNA CP118128.1 Genbank gene 296326 296441 . + . ID=gene-PUW31_01280;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW31_01280 CP118128.1 cmsearch rRNA 296326 296441 . + . ID=rna-PUW31_01280;Parent=gene-PUW31_01280;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_01280;product=5S ribosomal RNA CP118128.1 cmsearch exon 296326 296441 . + . ID=exon-PUW31_01280-1;Parent=rna-PUW31_01280;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_01280;product=5S ribosomal RNA CP118128.1 Genbank gene 296633 296709 . + . ID=gene-PUW31_01285;Name=PUW31_01285;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_01285 CP118128.1 tRNAscan-SE tRNA 296633 296709 . + . ID=rna-PUW31_01285;Parent=gene-PUW31_01285;anticodon=(pos:296667..296669);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_01285;product=tRNA-Asp CP118128.1 tRNAscan-SE exon 296633 296709 . + . ID=exon-PUW31_01285-1;Parent=rna-PUW31_01285;anticodon=(pos:296667..296669);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_01285;product=tRNA-Asp CP118128.1 Genbank gene 296874 297677 . + . ID=gene-PUW31_01290;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=PUW31_01290 CP118128.1 Protein Homology CDS 296874 297677 . + 0 ID=cds-WJH08978.1;Parent=gene-PUW31_01290;Dbxref=NCBI_GP:WJH08978.1;Name=WJH08978.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459253.1;locus_tag=PUW31_01290;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WJH08978.1;transl_table=11 CP118128.1 Genbank gene 297698 298612 . - . ID=gene-PUW31_01295;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=PUW31_01295 CP118128.1 Protein Homology CDS 297698 298612 . - 0 ID=cds-WJH08979.1;Parent=gene-PUW31_01295;Dbxref=NCBI_GP:WJH08979.1;Name=WJH08979.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459254.1;locus_tag=PUW31_01295;product=DNA-binding transcriptional regulator YafC;protein_id=WJH08979.1;transl_table=11 CP118128.1 Genbank pseudogene 298717 299891 . + . ID=gene-PUW31_01300;Name=PUW31_01300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_01300;pseudo=true CP118128.1 Protein Homology CDS 298717 299891 . + 0 ID=cds-PUW31_01300;Parent=gene-PUW31_01300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459255.1;locus_tag=PUW31_01300;product=MFS transporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 300022 300822 . + . ID=gene-PUW31_01305;Name=PUW31_01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01305 CP118128.1 Protein Homology CDS 300022 300822 . + 0 ID=cds-WJH08980.1;Parent=gene-PUW31_01305;Dbxref=NCBI_GP:WJH08980.1;Name=WJH08980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=PUW31_01305;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WJH08980.1;transl_table=11 CP118128.1 Genbank gene 300900 301670 . + . ID=gene-PUW31_01310;Name=PUW31_01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01310 CP118128.1 Protein Homology CDS 300900 301670 . + 0 ID=cds-WJH08981.1;Parent=gene-PUW31_01310;Dbxref=NCBI_GP:WJH08981.1;Name=WJH08981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459257.1;locus_tag=PUW31_01310;product=class I SAM-dependent methyltransferase;protein_id=WJH08981.1;transl_table=11 CP118128.1 Genbank gene 301726 303093 . - . ID=gene-PUW31_01315;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=PUW31_01315 CP118128.1 Protein Homology CDS 301726 303093 . - 0 ID=cds-WJH08982.1;Parent=gene-PUW31_01315;Dbxref=NCBI_GP:WJH08982.1;Name=WJH08982.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459258.1;locus_tag=PUW31_01315;product=murein transglycosylase D;protein_id=WJH08982.1;transl_table=11 CP118128.1 Genbank gene 303165 303920 . - . ID=gene-PUW31_01320;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=PUW31_01320 CP118128.1 Protein Homology CDS 303165 303920 . - 0 ID=cds-WJH08983.1;Parent=gene-PUW31_01320;Dbxref=NCBI_GP:WJH08983.1;Name=WJH08983.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459259.1;locus_tag=PUW31_01320;product=hydroxyacylglutathione hydrolase;protein_id=WJH08983.1;transl_table=11 CP118128.1 Genbank gene 303955 304677 . + . ID=gene-PUW31_01325;Name=PUW31_01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01325 CP118128.1 Protein Homology CDS 303955 304677 . + 0 ID=cds-WJH08984.1;Parent=gene-PUW31_01325;Dbxref=NCBI_GP:WJH08984.1;Name=WJH08984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459260.1;locus_tag=PUW31_01325;product=class I SAM-dependent methyltransferase;protein_id=WJH08984.1;transl_table=11 CP118128.1 Genbank gene 304674 305141 . - . ID=gene-PUW31_01330;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=PUW31_01330 CP118128.1 Protein Homology CDS 304674 305141 . - 0 ID=cds-WJH08985.1;Parent=gene-PUW31_01330;Dbxref=NCBI_GP:WJH08985.1;Name=WJH08985.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459261.1;locus_tag=PUW31_01330;product=ribonuclease HI;protein_id=WJH08985.1;transl_table=11 CP118128.1 Genbank gene 305205 305936 . + . ID=gene-PUW31_01335;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=PUW31_01335 CP118128.1 Protein Homology CDS 305205 305936 . + 0 ID=cds-WJH08986.1;Parent=gene-PUW31_01335;Dbxref=NCBI_GP:WJH08986.1;Name=WJH08986.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459262.1;locus_tag=PUW31_01335;product=DNA polymerase III subunit epsilon;protein_id=WJH08986.1;transl_table=11 CP118128.1 Genbank gene 306070 306146 . + . ID=gene-PUW31_01340;Name=PUW31_01340;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_01340 CP118128.1 tRNAscan-SE tRNA 306070 306146 . + . ID=rna-PUW31_01340;Parent=gene-PUW31_01340;anticodon=(pos:306104..306106);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_01340;product=tRNA-Asp CP118128.1 tRNAscan-SE exon 306070 306146 . + . ID=exon-PUW31_01340-1;Parent=rna-PUW31_01340;anticodon=(pos:306104..306106);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_01340;product=tRNA-Asp CP118128.1 Genbank gene 306286 307131 . - . ID=gene-PUW31_01345;Name=PUW31_01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01345 CP118128.1 Protein Homology CDS 306286 307131 . - 0 ID=cds-WJH08987.1;Parent=gene-PUW31_01345;Dbxref=NCBI_GP:WJH08987.1;Name=WJH08987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001289296.1;locus_tag=PUW31_01345;product=DUF4942 domain-containing protein;protein_id=WJH08987.1;transl_table=11 CP118128.1 Genbank gene 307209 307403 . - . ID=gene-PUW31_01350;Name=PUW31_01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01350 CP118128.1 Protein Homology CDS 307209 307403 . - 0 ID=cds-WJH08988.1;Parent=gene-PUW31_01350;Dbxref=NCBI_GP:WJH08988.1;Name=WJH08988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750277.1;locus_tag=PUW31_01350;product=DUF957 domain-containing protein;protein_id=WJH08988.1;transl_table=11 CP118128.1 Genbank gene 307429 307920 . - . ID=gene-PUW31_01355;Name=PUW31_01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01355 CP118128.1 Protein Homology CDS 307429 307920 . - 0 ID=cds-WJH08989.1;Parent=gene-PUW31_01355;Dbxref=NCBI_GP:WJH08989.1;Name=WJH08989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392970.1;locus_tag=PUW31_01355;product=DUF5983 family protein;protein_id=WJH08989.1;transl_table=11 CP118128.1 Genbank gene 307868 308293 . - . ID=gene-PUW31_01360;Name=PUW31_01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01360 CP118128.1 Protein Homology CDS 307868 308293 . - 0 ID=cds-WJH08990.1;Parent=gene-PUW31_01360;Dbxref=NCBI_GP:WJH08990.1;Name=WJH08990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001166552.1;locus_tag=PUW31_01360;product=TA system toxin CbtA family protein;protein_id=WJH08990.1;transl_table=11 CP118128.1 Genbank gene 308352 308996 . - . ID=gene-PUW31_01365;Name=PUW31_01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01365 CP118128.1 Protein Homology CDS 308352 308996 . - 0 ID=cds-WJH08991.1;Parent=gene-PUW31_01365;Dbxref=NCBI_GP:WJH08991.1;Name=WJH08991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000086751.1;locus_tag=PUW31_01365;product=antitoxin of toxin-antitoxin stability system;protein_id=WJH08991.1;transl_table=11 CP118128.1 Genbank gene 308993 309364 . - . ID=gene-PUW31_01370;Name=PUW31_01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01370 CP118128.1 Protein Homology CDS 308993 309364 . - 0 ID=cds-WJH08992.1;Parent=gene-PUW31_01370;Dbxref=NCBI_GP:WJH08992.1;Name=WJH08992.1;Ontology_term=GO:0051495;gbkey=CDS;go_process=positive regulation of cytoskeleton organization|0051495||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000158818.1;locus_tag=PUW31_01370;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WJH08992.1;transl_table=11 CP118128.1 Genbank gene 309336 309704 . - . ID=gene-PUW31_01375;Name=PUW31_01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01375 CP118128.1 Protein Homology CDS 309336 309704 . - 0 ID=cds-WJH08993.1;Parent=gene-PUW31_01375;Dbxref=NCBI_GP:WJH08993.1;Name=WJH08993.1;Ontology_term=GO:0051495;gbkey=CDS;go_process=positive regulation of cytoskeleton organization|0051495||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001282843.1;locus_tag=PUW31_01375;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WJH08993.1;transl_table=11 CP118128.1 Genbank gene 309722 309943 . - . ID=gene-PUW31_01380;Name=PUW31_01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01380 CP118128.1 Protein Homology CDS 309722 309943 . - 0 ID=cds-WJH08994.1;Parent=gene-PUW31_01380;Dbxref=NCBI_GP:WJH08994.1;Name=WJH08994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588435.1;locus_tag=PUW31_01380;product=DUF987 family protein;protein_id=WJH08994.1;transl_table=11 CP118128.1 Genbank gene 309940 310230 . - . ID=gene-PUW31_01385;Name=PUW31_01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01385 CP118128.1 Protein Homology CDS 309940 310230 . - 0 ID=cds-WJH08995.1;Parent=gene-PUW31_01385;Dbxref=NCBI_GP:WJH08995.1;Name=WJH08995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001243218.1;locus_tag=PUW31_01385;product=hypothetical protein;protein_id=WJH08995.1;transl_table=11 CP118128.1 Genbank gene 310246 310725 . - . ID=gene-PUW31_01390;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=PUW31_01390 CP118128.1 Protein Homology CDS 310246 310725 . - 0 ID=cds-WJH08996.1;Parent=gene-PUW31_01390;Dbxref=NCBI_GP:WJH08996.1;Name=WJH08996.1;Ontology_term=GO:0006281;gbkey=CDS;gene=radC;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004109365.1;locus_tag=PUW31_01390;product=DNA repair protein RadC;protein_id=WJH08996.1;transl_table=11 CP118128.1 Genbank gene 310736 311194 . - . ID=gene-PUW31_01395;Name=PUW31_01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01395 CP118128.1 Protein Homology CDS 310736 311194 . - 0 ID=cds-WJH08997.1;Parent=gene-PUW31_01395;Dbxref=NCBI_GP:WJH08997.1;Name=WJH08997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008783821.1;locus_tag=PUW31_01395;product=antirestriction protein;protein_id=WJH08997.1;transl_table=11 CP118128.1 Genbank gene 311276 311659 . - . ID=gene-PUW31_01400;Name=PUW31_01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01400 CP118128.1 Protein Homology CDS 311276 311659 . - 0 ID=cds-WJH08998.1;Parent=gene-PUW31_01400;Dbxref=NCBI_GP:WJH08998.1;Name=WJH08998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000522007.1;locus_tag=PUW31_01400;product=hypothetical protein;protein_id=WJH08998.1;transl_table=11 CP118128.1 Genbank gene 312065 312883 . - . ID=gene-PUW31_01405;Name=PUW31_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01405 CP118128.1 Protein Homology CDS 312065 312883 . - 0 ID=cds-WJH08999.1;Parent=gene-PUW31_01405;Dbxref=NCBI_GP:WJH08999.1;Name=WJH08999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234406.1;locus_tag=PUW31_01405;product=DUF932 domain-containing protein;protein_id=WJH08999.1;transl_table=11 CP118128.1 Genbank gene 312989 313228 . - . ID=gene-PUW31_01410;Name=PUW31_01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01410 CP118128.1 Protein Homology CDS 312989 313228 . - 0 ID=cds-WJH10636.1;Parent=gene-PUW31_01410;Dbxref=NCBI_GP:WJH10636.1;Name=WJH10636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007374428.1;locus_tag=PUW31_01410;product=DUF905 family protein;protein_id=WJH10636.1;transl_table=11 CP118128.1 Genbank gene 313334 313747 . - . ID=gene-PUW31_01415;Name=PUW31_01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01415 CP118128.1 Protein Homology CDS 313334 313747 . - 0 ID=cds-WJH09000.1;Parent=gene-PUW31_01415;Dbxref=NCBI_GP:WJH09000.1;Name=WJH09000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789534.1;locus_tag=PUW31_01415;product=hypothetical protein;protein_id=WJH09000.1;transl_table=11 CP118128.1 Genbank gene 314021 314560 . - . ID=gene-PUW31_01420;Name=PUW31_01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01420 CP118128.1 Protein Homology CDS 314021 314560 . - 0 ID=cds-WJH09001.1;Parent=gene-PUW31_01420;Dbxref=NCBI_GP:WJH09001.1;Name=WJH09001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001104019.1;locus_tag=PUW31_01420;product=DUF4339 domain-containing protein;protein_id=WJH09001.1;transl_table=11 CP118128.1 Genbank gene 314623 315075 . - . ID=gene-PUW31_01425;Name=PUW31_01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01425 CP118128.1 Protein Homology CDS 314623 315075 . - 0 ID=cds-WJH09002.1;Parent=gene-PUW31_01425;Dbxref=NCBI_GP:WJH09002.1;Name=WJH09002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245672.1;locus_tag=PUW31_01425;product=hypothetical protein;protein_id=WJH09002.1;transl_table=11 CP118128.1 Genbank gene 315072 315524 . - . ID=gene-PUW31_01430;Name=PUW31_01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01430 CP118128.1 Protein Homology CDS 315072 315524 . - 0 ID=cds-WJH09003.1;Parent=gene-PUW31_01430;Dbxref=NCBI_GP:WJH09003.1;Name=WJH09003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683446.1;locus_tag=PUW31_01430;product=hypothetical protein;protein_id=WJH09003.1;transl_table=11 CP118128.1 Genbank gene 315561 316127 . - . ID=gene-PUW31_01435;Name=PUW31_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01435 CP118128.1 Protein Homology CDS 315561 316127 . - 0 ID=cds-WJH09004.1;Parent=gene-PUW31_01435;Dbxref=NCBI_GP:WJH09004.1;Name=WJH09004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000765651.1;locus_tag=PUW31_01435;product=hypothetical protein;protein_id=WJH09004.1;transl_table=11 CP118128.1 Genbank gene 316124 316837 . - . ID=gene-PUW31_01440;Name=PUW31_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01440 CP118128.1 Protein Homology CDS 316124 316837 . - 0 ID=cds-WJH09005.1;Parent=gene-PUW31_01440;Dbxref=NCBI_GP:WJH09005.1;Name=WJH09005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000075759.1;locus_tag=PUW31_01440;product=WYL domain-containing protein;protein_id=WJH09005.1;transl_table=11 CP118128.1 Genbank pseudogene 317098 317973 . - . ID=gene-PUW31_01445;Name=PUW31_01445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_01445;pseudo=true CP118128.1 Protein Homology CDS 317098 317973 . - 0 ID=cds-PUW31_01445;Parent=gene-PUW31_01445;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000165430.1;locus_tag=PUW31_01445;product=GTPase family protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 318511 318747 . + . ID=gene-PUW31_01450;Name=PUW31_01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01450 CP118128.1 GeneMarkS-2+ CDS 318511 318747 . + 0 ID=cds-WJH09006.1;Parent=gene-PUW31_01450;Dbxref=NCBI_GP:WJH09006.1;Name=WJH09006.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_01450;product=hypothetical protein;protein_id=WJH09006.1;transl_table=11 CP118128.1 Genbank gene 319320 320921 . + . ID=gene-PUW31_01455;Name=PUW31_01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01455 CP118128.1 GeneMarkS-2+ CDS 319320 320921 . + 0 ID=cds-WJH10820.1;Parent=gene-PUW31_01455;Dbxref=NCBI_GP:WJH10820.1;Name=WJH10820.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_01455;product=hypothetical protein;protein_id=WJH10820.1;transl_table=11 CP118128.1 Genbank gene 320909 321727 . + . ID=gene-PUW31_01460;Name=PUW31_01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01460 CP118128.1 GeneMarkS-2+ CDS 320909 321727 . + 0 ID=cds-WJH09007.1;Parent=gene-PUW31_01460;Dbxref=NCBI_GP:WJH09007.1;Name=WJH09007.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_01460;product=hypothetical protein;protein_id=WJH09007.1;transl_table=11 CP118128.1 Genbank gene 321835 322269 . + . ID=gene-PUW31_01465;Name=PUW31_01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01465 CP118128.1 GeneMarkS-2+ CDS 321835 322269 . + 0 ID=cds-WJH09008.1;Parent=gene-PUW31_01465;Dbxref=NCBI_GP:WJH09008.1;Name=WJH09008.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_01465;product=hypothetical protein;protein_id=WJH09008.1;transl_table=11 CP118128.1 Genbank pseudogene 322303 322608 . + . ID=gene-PUW31_01470;Name=PUW31_01470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_01470;pseudo=true CP118128.1 Protein Homology CDS 322303 322608 . + 0 ID=cds-PUW31_01470;Parent=gene-PUW31_01470;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: protein motif:HMM:NF024486.2;locus_tag=PUW31_01470;product=AAA domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 322605 323165 . + . ID=gene-PUW31_01475;Name=PUW31_01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01475 CP118128.1 Protein Homology CDS 322605 323165 . + 0 ID=cds-WJH09009.1;Parent=gene-PUW31_01475;Dbxref=NCBI_GP:WJH09009.1;Name=WJH09009.1;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: protein motif:HMM:NF024486.2;locus_tag=PUW31_01475;product=AAA domain-containing protein;protein_id=WJH09009.1;transl_table=11 CP118128.1 Genbank gene 323193 323993 . + . ID=gene-PUW31_01480;Name=PUW31_01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01480 CP118128.1 Protein Homology CDS 323193 323993 . + 0 ID=cds-WJH09010.1;Parent=gene-PUW31_01480;Dbxref=NCBI_GP:WJH09010.1;Name=WJH09010.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024487.2;locus_tag=PUW31_01480;product=AAA domain-containing protein;protein_id=WJH09010.1;transl_table=11 CP118128.1 Genbank gene 323990 325513 . + . ID=gene-PUW31_01485;Name=PUW31_01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01485 CP118128.1 Protein Homology CDS 323990 325513 . + 0 ID=cds-WJH09011.1;Parent=gene-PUW31_01485;Dbxref=NCBI_GP:WJH09011.1;Name=WJH09011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000631139.1;locus_tag=PUW31_01485;product=hypothetical protein;protein_id=WJH09011.1;transl_table=11 CP118128.1 Genbank gene 325831 327681 . - . ID=gene-PUW31_01490;Name=PUW31_01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01490 CP118128.1 Protein Homology CDS 325831 327681 . - 0 ID=cds-WJH09012.1;Parent=gene-PUW31_01490;Dbxref=NCBI_GP:WJH09012.1;Name=WJH09012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000556732.1;locus_tag=PUW31_01490;product=hypothetical protein;protein_id=WJH09012.1;transl_table=11 CP118128.1 Genbank gene 327785 328009 . + . ID=gene-PUW31_01495;Name=PUW31_01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01495 CP118128.1 Protein Homology CDS 327785 328009 . + 0 ID=cds-WJH09013.1;Parent=gene-PUW31_01495;Dbxref=NCBI_GP:WJH09013.1;Name=WJH09013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014532213.1;locus_tag=PUW31_01495;product=AlpA family phage regulatory protein;protein_id=WJH09013.1;transl_table=11 CP118128.1 Genbank gene 328034 329554 . + . ID=gene-PUW31_01500;Name=PUW31_01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01500 CP118128.1 Protein Homology CDS 328034 329554 . + 0 ID=cds-WJH09014.1;Parent=gene-PUW31_01500;Dbxref=NCBI_GP:WJH09014.1;Name=WJH09014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778659.1;locus_tag=PUW31_01500;product=YfjI family protein;protein_id=WJH09014.1;transl_table=11 CP118128.1 Genbank pseudogene 329948 330403 . + . ID=gene-PUW31_01505;Name=PUW31_01505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_01505;pseudo=true CP118128.1 Protein Homology CDS 329948 330403 . + 0 ID=cds-PUW31_01505;Parent=gene-PUW31_01505;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023154.2;locus_tag=PUW31_01505;product=inovirus Gp2 family protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 330439 331203 . - . ID=gene-PUW31_01510;Name=tagK;gbkey=Gene;gene=tagK;gene_biotype=protein_coding;locus_tag=PUW31_01510 CP118128.1 Protein Homology CDS 330439 331203 . - 0 ID=cds-WJH09015.1;Parent=gene-PUW31_01510;Dbxref=NCBI_GP:WJH09015.1;Name=WJH09015.1;gbkey=CDS;gene=tagK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000806695.1;locus_tag=PUW31_01510;product=type VI secretion system-associated protein TagK;protein_id=WJH09015.1;transl_table=11 CP118128.1 Genbank pseudogene 331571 334370 . + . ID=gene-PUW31_01515;Name=PUW31_01515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_01515;pseudo=true CP118128.1 Protein Homology CDS 331571 334370 . + 0 ID=cds-PUW31_01515;Parent=gene-PUW31_01515;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000449788.1;locus_tag=PUW31_01515;product=AAA family ATPase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 334336 334701 . + . ID=gene-PUW31_01520;Name=PUW31_01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01520 CP118128.1 Protein Homology CDS 334336 334701 . + 0 ID=cds-WJH09016.1;Parent=gene-PUW31_01520;Dbxref=NCBI_GP:WJH09016.1;Name=WJH09016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001231281.1;locus_tag=PUW31_01520;product=hypothetical protein;protein_id=WJH09016.1;transl_table=11 CP118128.1 Genbank gene 335479 335799 . + . ID=gene-PUW31_01525;Name=PUW31_01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01525 CP118128.1 Protein Homology CDS 335479 335799 . + 0 ID=cds-WJH09017.1;Parent=gene-PUW31_01525;Dbxref=NCBI_GP:WJH09017.1;Name=WJH09017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575643.1;locus_tag=PUW31_01525;product=Imm8 family immunity protein;protein_id=WJH09017.1;transl_table=11 CP118128.1 Genbank gene 335882 336010 . - . ID=gene-PUW31_01530;Name=PUW31_01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01530 CP118128.1 Protein Homology CDS 335882 336010 . - 0 ID=cds-WJH09018.1;Parent=gene-PUW31_01530;Dbxref=NCBI_GP:WJH09018.1;Name=WJH09018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675090.1;locus_tag=PUW31_01530;product=hypothetical protein;protein_id=WJH09018.1;transl_table=11 CP118128.1 Genbank gene 336255 336371 . + . ID=gene-PUW31_01535;Name=PUW31_01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01535 CP118128.1 Protein Homology CDS 336255 336371 . + 0 ID=cds-WJH09019.1;Parent=gene-PUW31_01535;Dbxref=NCBI_GP:WJH09019.1;Name=WJH09019.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03696.1;locus_tag=PUW31_01535;product=hypothetical protein;protein_id=WJH09019.1;transl_table=11 CP118128.1 Genbank gene 336461 336694 . + . ID=gene-PUW31_01540;Name=PUW31_01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01540 CP118128.1 GeneMarkS-2+ CDS 336461 336694 . + 0 ID=cds-WJH09020.1;Parent=gene-PUW31_01540;Dbxref=NCBI_GP:WJH09020.1;Name=WJH09020.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_01540;product=hypothetical protein;protein_id=WJH09020.1;transl_table=11 CP118128.1 Genbank gene 337565 337963 . + . ID=gene-PUW31_01545;Name=PUW31_01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01545 CP118128.1 Protein Homology CDS 337565 337963 . + 0 ID=cds-WJH09021.1;Parent=gene-PUW31_01545;Dbxref=NCBI_GP:WJH09021.1;Name=WJH09021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828181.1;locus_tag=PUW31_01545;product=sugar tyrosine-protein kinase;protein_id=WJH09021.1;transl_table=11 CP118128.1 Genbank gene 338349 338627 . + . ID=gene-PUW31_01550;Name=PUW31_01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01550 CP118128.1 Protein Homology CDS 338349 338627 . + 0 ID=cds-WJH10637.1;Parent=gene-PUW31_01550;Dbxref=NCBI_GP:WJH10637.1;Name=WJH10637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459293.1;locus_tag=PUW31_01550;product=hypothetical protein;protein_id=WJH10637.1;transl_table=11 CP118128.1 Genbank gene 338759 339007 . - . ID=gene-PUW31_01555;Name=PUW31_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01555 CP118128.1 Protein Homology CDS 338759 339007 . - 0 ID=cds-WJH09022.1;Parent=gene-PUW31_01555;Dbxref=NCBI_GP:WJH09022.1;Name=WJH09022.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_446753.1;locus_tag=PUW31_01555;product=SymE family type I addiction module toxin;protein_id=WJH09022.1;transl_table=11 CP118128.1 Genbank pseudogene 339060 339764 . + . ID=gene-PUW31_01560;Name=PUW31_01560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_01560;pseudo=true CP118128.1 Protein Homology CDS 339060 339764 . + 0 ID=cds-PUW31_01560;Parent=gene-PUW31_01560;Note=frameshifted;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611456.1;locus_tag=PUW31_01560;product=integrase core domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 340386 340883 . + . ID=gene-PUW31_01565;Name=PUW31_01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01565 CP118128.1 Protein Homology CDS 340386 340883 . + 0 ID=cds-WJH09023.1;Parent=gene-PUW31_01565;Dbxref=NCBI_GP:WJH09023.1;Name=WJH09023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789627.1;locus_tag=PUW31_01565;product=Saf-pilin pilus formation protein SafA;protein_id=WJH09023.1;transl_table=11 CP118128.1 Genbank gene 340958 341698 . + . ID=gene-PUW31_01570;Name=safB;gbkey=Gene;gene=safB;gene_biotype=protein_coding;locus_tag=PUW31_01570 CP118128.1 Protein Homology CDS 340958 341698 . + 0 ID=cds-WJH09024.1;Parent=gene-PUW31_01570;Dbxref=NCBI_GP:WJH09024.1;Name=WJH09024.1;gbkey=CDS;gene=safB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465813.1;locus_tag=PUW31_01570;product=pili assembly chaperone SafB;protein_id=WJH09024.1;transl_table=11 CP118128.1 Genbank pseudogene 341722 344203 . + . ID=gene-PUW31_01575;Name=PUW31_01575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_01575;pseudo=true CP118128.1 Protein Homology CDS 341722 344203 . + 0 ID=cds-PUW31_01575;Parent=gene-PUW31_01575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459299.1;locus_tag=PUW31_01575;product=fimbrial biogenesis outer membrane usher protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 344225 344695 . + . ID=gene-PUW31_01580;Name=afaD;gbkey=Gene;gene=afaD;gene_biotype=protein_coding;locus_tag=PUW31_01580 CP118128.1 Protein Homology CDS 344225 344695 . + 0 ID=cds-WJH09025.1;Parent=gene-PUW31_01580;Dbxref=NCBI_GP:WJH09025.1;Name=WJH09025.1;gbkey=CDS;gene=afaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459300.1;locus_tag=PUW31_01580;product=AfaD family invasin;protein_id=WJH09025.1;transl_table=11 CP118128.1 Genbank pseudogene 345103 345923 . + . ID=gene-PUW31_01585;Name=PUW31_01585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_01585;pseudo=true CP118128.1 Protein Homology CDS 345103 345923 . + 0 ID=cds-PUW31_01585;Parent=gene-PUW31_01585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459301.1;locus_tag=PUW31_01585;product=polysaccharide deacetylase family protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 346006 346246 . + . ID=gene-PUW31_01590;Name=PUW31_01590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_01590;pseudo=true CP118128.1 Protein Homology CDS 346006 346246 . + 0 ID=cds-PUW31_01590;Parent=gene-PUW31_01590;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012602066.1;locus_tag=PUW31_01590;product=PerC family transcriptional regulator;pseudo=true;transl_table=11 CP118128.1 Genbank gene 346740 347681 . + . ID=gene-PUW31_01595;Name=PUW31_01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01595 CP118128.1 Protein Homology CDS 346740 347681 . + 0 ID=cds-WJH09026.1;Parent=gene-PUW31_01595;Dbxref=NCBI_GP:WJH09026.1;Name=WJH09026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459302.1;locus_tag=PUW31_01595;product=LysR family transcriptional regulator;protein_id=WJH09026.1;transl_table=11 CP118128.1 Genbank gene 347798 348013 . + . ID=gene-PUW31_01600;Name=PUW31_01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01600 CP118128.1 Protein Homology CDS 347798 348013 . + 0 ID=cds-WJH09027.1;Parent=gene-PUW31_01600;Dbxref=NCBI_GP:WJH09027.1;Name=WJH09027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459303.1;locus_tag=PUW31_01600;product=hypothetical protein;protein_id=WJH09027.1;transl_table=11 CP118128.1 Genbank gene 348017 348736 . - . ID=gene-PUW31_01605;Name=pagN;gbkey=Gene;gene=pagN;gene_biotype=protein_coding;locus_tag=PUW31_01605 CP118128.1 Protein Homology CDS 348017 348736 . - 0 ID=cds-WJH09028.1;Parent=gene-PUW31_01605;Dbxref=NCBI_GP:WJH09028.1;Name=WJH09028.1;gbkey=CDS;gene=pagN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459304.1;locus_tag=PUW31_01605;product=adhesin/invasin protein PagN;protein_id=WJH09028.1;transl_table=11 CP118128.1 Genbank gene 349067 349474 . - . ID=gene-PUW31_01610;Name=PUW31_01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01610 CP118128.1 Protein Homology CDS 349067 349474 . - 0 ID=cds-WJH09029.1;Parent=gene-PUW31_01610;Dbxref=NCBI_GP:WJH09029.1;Name=WJH09029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459305.1;locus_tag=PUW31_01610;product=Spy/CpxP family protein refolding chaperone;protein_id=WJH09029.1;transl_table=11 CP118128.1 Genbank gene 349845 350612 . - . ID=gene-PUW31_01615;Name=PUW31_01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01615 CP118128.1 Protein Homology CDS 349845 350612 . - 0 ID=cds-WJH09030.1;Parent=gene-PUW31_01615;Dbxref=NCBI_GP:WJH09030.1;Name=WJH09030.1;Ontology_term=GO:0006807;gbkey=CDS;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459306.1;locus_tag=PUW31_01615;product=amidohydrolase;protein_id=WJH09030.1;transl_table=11 CP118128.1 Genbank gene 350721 353165 . - . ID=gene-PUW31_01620;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=PUW31_01620 CP118128.1 Protein Homology CDS 350721 353165 . - 0 ID=cds-WJH09031.1;Parent=gene-PUW31_01620;Dbxref=NCBI_GP:WJH09031.1;Name=WJH09031.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459307.1;locus_tag=PUW31_01620;product=acyl-CoA dehydrogenase FadE;protein_id=WJH09031.1;transl_table=11 CP118128.1 Genbank gene 353405 353983 . + . ID=gene-PUW31_01625;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=PUW31_01625 CP118128.1 Protein Homology CDS 353405 353983 . + 0 ID=cds-WJH09032.1;Parent=gene-PUW31_01625;Dbxref=NCBI_GP:WJH09032.1;Name=WJH09032.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459308.1;locus_tag=PUW31_01625;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WJH09032.1;transl_table=11 CP118128.1 Genbank gene 354196 354963 . + . ID=gene-PUW31_01630;Name=PUW31_01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01630 CP118128.1 Protein Homology CDS 354196 354963 . + 0 ID=cds-WJH09033.1;Parent=gene-PUW31_01630;Dbxref=NCBI_GP:WJH09033.1;Name=WJH09033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459309.1;locus_tag=PUW31_01630;product=class II glutamine amidotransferase;protein_id=WJH09033.1;transl_table=11 CP118128.1 Genbank gene 354934 355674 . - . ID=gene-PUW31_01635;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=PUW31_01635 CP118128.1 Protein Homology CDS 354934 355674 . - 0 ID=cds-WJH09034.1;Parent=gene-PUW31_01635;Dbxref=NCBI_GP:WJH09034.1;Name=WJH09034.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459310.1;locus_tag=PUW31_01635;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WJH09034.1;transl_table=11 CP118128.1 Genbank gene 355924 356979 . + . ID=gene-PUW31_01640;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=PUW31_01640 CP118128.1 Protein Homology CDS 355924 356979 . + 0 ID=cds-WJH09035.1;Parent=gene-PUW31_01640;Dbxref=NCBI_GP:WJH09035.1;Name=WJH09035.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459311.1;locus_tag=PUW31_01640;product=DNA polymerase IV;protein_id=WJH09035.1;transl_table=11 CP118128.1 Genbank gene 357198 358337 . + . ID=gene-PUW31_01645;Name=PUW31_01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01645 CP118128.1 Protein Homology CDS 357198 358337 . + 0 ID=cds-WJH09036.1;Parent=gene-PUW31_01645;Dbxref=NCBI_GP:WJH09036.1;Name=WJH09036.1;Ontology_term=GO:0006415,GO:0003674;gbkey=CDS;go_function=molecular_function|0003674||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006895405.1;locus_tag=PUW31_01645;product=RNA ligase RtcB family protein;protein_id=WJH09036.1;transl_table=11 CP118128.1 Genbank gene 358334 358948 . + . ID=gene-PUW31_01650;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=protein_coding;locus_tag=PUW31_01650 CP118128.1 Protein Homology CDS 358334 358948 . + 0 ID=cds-WJH09037.1;Parent=gene-PUW31_01650;Dbxref=NCBI_GP:WJH09037.1;Name=WJH09037.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfH;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459312.1;locus_tag=PUW31_01650;product=peptide chain release factor H;protein_id=WJH09037.1;transl_table=11 CP118128.1 Genbank gene 359103 360560 . - . ID=gene-PUW31_01655;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=PUW31_01655 CP118128.1 Protein Homology CDS 359103 360560 . - 0 ID=cds-WJH09038.1;Parent=gene-PUW31_01655;Dbxref=NCBI_GP:WJH09038.1;Name=WJH09038.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459313.1;locus_tag=PUW31_01655;product=cytosol nonspecific dipeptidase;protein_id=WJH09038.1;transl_table=11 CP118128.1 Genbank gene 360809 361267 . + . ID=gene-PUW31_01660;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=PUW31_01660 CP118128.1 Protein Homology CDS 360809 361267 . + 0 ID=cds-WJH09039.1;Parent=gene-PUW31_01660;Dbxref=NCBI_GP:WJH09039.1;Name=WJH09039.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459314.1;locus_tag=PUW31_01660;product=xanthine phosphoribosyltransferase;protein_id=WJH09039.1;transl_table=11 CP118128.1 Genbank gene 361356 362600 . + . ID=gene-PUW31_01665;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=PUW31_01665 CP118128.1 Protein Homology CDS 361356 362600 . + 0 ID=cds-WJH09040.1;Parent=gene-PUW31_01665;Dbxref=NCBI_GP:WJH09040.1;Name=WJH09040.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459315.1;locus_tag=PUW31_01665;product=esterase FrsA;protein_id=WJH09040.1;transl_table=11 CP118128.1 Genbank gene 362658 363059 . + . ID=gene-PUW31_01670;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=PUW31_01670 CP118128.1 Protein Homology CDS 362658 363059 . + 0 ID=cds-WJH09041.1;Parent=gene-PUW31_01670;Dbxref=NCBI_GP:WJH09041.1;Name=WJH09041.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459316.1;locus_tag=PUW31_01670;product=sigma factor-binding protein Crl;protein_id=WJH09041.1;transl_table=11 CP118128.1 Genbank pseudogene 363110 364162 . - . ID=gene-PUW31_01675;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=pseudogene;locus_tag=PUW31_01675;pseudo=true CP118128.1 Protein Homology CDS 363110 364162 . - 0 ID=cds-PUW31_01675;Parent=gene-PUW31_01675;Note=internal stop;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459317.1;locus_tag=PUW31_01675;product=phosphoporin PhoE;pseudo=true;transl_table=11 CP118128.1 Genbank gene 364445 365548 . + . ID=gene-PUW31_01680;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=PUW31_01680 CP118128.1 Protein Homology CDS 364445 365548 . + 0 ID=cds-WJH09042.1;Parent=gene-PUW31_01680;Dbxref=NCBI_GP:WJH09042.1;Name=WJH09042.1;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459318.1;locus_tag=PUW31_01680;product=glutamate 5-kinase;protein_id=WJH09042.1;transl_table=11 CP118128.1 Genbank gene 365560 366807 . + . ID=gene-PUW31_01685;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=PUW31_01685 CP118128.1 Protein Homology CDS 365560 366807 . + 0 ID=cds-WJH09043.1;Parent=gene-PUW31_01685;Dbxref=NCBI_GP:WJH09043.1;Name=WJH09043.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459319.1;locus_tag=PUW31_01685;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WJH09043.1;transl_table=11 CP118128.1 Genbank gene 366923 366998 . + . ID=gene-PUW31_01690;Name=PUW31_01690;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_01690 CP118128.1 tRNAscan-SE tRNA 366923 366998 . + . ID=rna-PUW31_01690;Parent=gene-PUW31_01690;anticodon=(pos:366956..366958);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_01690;product=tRNA-Thr CP118128.1 tRNAscan-SE exon 366923 366998 . + . ID=exon-PUW31_01690-1;Parent=rna-PUW31_01690;anticodon=(pos:366956..366958);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_01690;product=tRNA-Thr CP118128.1 Genbank pseudogene 367162 367368 . + . ID=gene-PUW31_01695;Name=PUW31_01695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_01695;pseudo=true CP118128.1 Protein Homology CDS 367162 367368 . + 0 ID=cds-PUW31_01695;Parent=gene-PUW31_01695;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225313.1;locus_tag=PUW31_01695;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 367363 368069 . - . ID=gene-PUW31_01700;Name=PUW31_01700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_01700;pseudo=true CP118128.1 Protein Homology CDS 367363 368069 . - 0 ID=cds-PUW31_01700;Parent=gene-PUW31_01700;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=PUW31_01700;product=IS3 family transposase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 368136 368480 . + . ID=gene-PUW31_01705;Name=PUW31_01705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_01705;pseudo=true CP118128.1 Protein Homology CDS 368136 368480 . + 0 ID=cds-PUW31_01705;Parent=gene-PUW31_01705;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228916.1;locus_tag=PUW31_01705;product=diol dehydratase reactivase ATPase-like domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 368470 368577 . + . ID=gene-PUW31_01710;Name=PUW31_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01710 CP118128.1 Protein Homology CDS 368470 368577 . + 0 ID=cds-WJH10638.1;Parent=gene-PUW31_01710;Dbxref=NCBI_GP:WJH10638.1;Name=WJH10638.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020417.2;locus_tag=PUW31_01710;product=diol dehydratase reactivase ATPase-like domain-containing protein;protein_id=WJH10638.1;transl_table=11 CP118128.1 Genbank gene 368687 369010 . + . ID=gene-PUW31_01715;Name=PUW31_01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01715 CP118128.1 Protein Homology CDS 368687 369010 . + 0 ID=cds-WJH09044.1;Parent=gene-PUW31_01715;Dbxref=NCBI_GP:WJH09044.1;Name=WJH09044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459322.1;locus_tag=PUW31_01715;product=DUF1889 family protein;protein_id=WJH09044.1;transl_table=11 CP118128.1 Genbank gene 369352 370590 . + . ID=gene-PUW31_01720;Name=PUW31_01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01720 CP118128.1 Protein Homology CDS 369352 370590 . + 0 ID=cds-WJH10639.1;Parent=gene-PUW31_01720;Dbxref=NCBI_GP:WJH10639.1;Name=WJH10639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459323.3;locus_tag=PUW31_01720;product=MFS transporter;protein_id=WJH10639.1;transl_table=11 CP118128.1 Genbank gene 370722 372143 . + . ID=gene-PUW31_01725;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=PUW31_01725 CP118128.1 Protein Homology CDS 370722 372143 . + 0 ID=cds-WJH09045.1;Parent=gene-PUW31_01725;Dbxref=NCBI_GP:WJH09045.1;Name=WJH09045.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459324.1;locus_tag=PUW31_01725;product=3-isopropylmalate dehydratase large subunit;protein_id=WJH09045.1;transl_table=11 CP118128.1 Genbank gene 372145 372771 . + . ID=gene-PUW31_01730;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=PUW31_01730 CP118128.1 Protein Homology CDS 372145 372771 . + 0 ID=cds-WJH09046.1;Parent=gene-PUW31_01730;Dbxref=NCBI_GP:WJH09046.1;Name=WJH09046.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459325.1;locus_tag=PUW31_01730;product=3-isopropylmalate dehydratase small subunit;protein_id=WJH09046.1;transl_table=11 CP118128.1 Genbank gene 372786 373664 . + . ID=gene-PUW31_01735;Name=PUW31_01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01735 CP118128.1 Protein Homology CDS 372786 373664 . + 0 ID=cds-WJH09047.1;Parent=gene-PUW31_01735;Dbxref=NCBI_GP:WJH09047.1;Name=WJH09047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459326.1;locus_tag=PUW31_01735;product=fumarylacetoacetate hydrolase family protein;protein_id=WJH09047.1;transl_table=11 CP118128.1 Genbank gene 373664 374578 . + . ID=gene-PUW31_01740;Name=PUW31_01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01740 CP118128.1 Protein Homology CDS 373664 374578 . + 0 ID=cds-WJH09048.1;Parent=gene-PUW31_01740;Dbxref=NCBI_GP:WJH09048.1;Name=WJH09048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459327.1;locus_tag=PUW31_01740;product=alpha/beta hydrolase;protein_id=WJH09048.1;transl_table=11 CP118128.1 Genbank gene 374612 375577 . + . ID=gene-PUW31_01745;Name=PUW31_01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01745 CP118128.1 Protein Homology CDS 374612 375577 . + 0 ID=cds-WJH09049.1;Parent=gene-PUW31_01745;Dbxref=NCBI_GP:WJH09049.1;Name=WJH09049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459328.1;locus_tag=PUW31_01745;product=LysR family transcriptional regulator;protein_id=WJH09049.1;transl_table=11 CP118128.1 Genbank gene 375522 375794 . - . ID=gene-PUW31_01750;Name=PUW31_01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01750 CP118128.1 Protein Homology CDS 375522 375794 . - 0 ID=cds-WJH09050.1;Parent=gene-PUW31_01750;Dbxref=NCBI_GP:WJH09050.1;Name=WJH09050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459329.1;locus_tag=PUW31_01750;product=cytoplasmic protein;protein_id=WJH09050.1;transl_table=11 CP118128.1 Genbank gene 376485 376883 . + . ID=gene-PUW31_01755;Name=PUW31_01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01755 CP118128.1 Protein Homology CDS 376485 376883 . + 0 ID=cds-WJH09051.1;Parent=gene-PUW31_01755;Dbxref=NCBI_GP:WJH09051.1;Name=WJH09051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459330.1;locus_tag=PUW31_01755;product=outer membrane protein;protein_id=WJH09051.1;transl_table=11 CP118128.1 Genbank gene 376930 377688 . - . ID=gene-PUW31_01760;Name=stbE;gbkey=Gene;gene=stbE;gene_biotype=protein_coding;locus_tag=PUW31_01760 CP118128.1 Protein Homology CDS 376930 377688 . - 0 ID=cds-WJH09052.1;Parent=gene-PUW31_01760;Dbxref=NCBI_GP:WJH09052.1;Name=WJH09052.1;gbkey=CDS;gene=stbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459331.1;locus_tag=PUW31_01760;product=fimbrial biogenesis chaperone StbE;protein_id=WJH09052.1;transl_table=11 CP118128.1 Genbank gene 377654 378979 . - . ID=gene-PUW31_01765;Name=stbD;gbkey=Gene;gene=stbD;gene_biotype=protein_coding;locus_tag=PUW31_01765 CP118128.1 Protein Homology CDS 377654 378979 . - 0 ID=cds-WJH09053.1;Parent=gene-PUW31_01765;Dbxref=NCBI_GP:WJH09053.1;Name=WJH09053.1;gbkey=CDS;gene=stbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459332.1;locus_tag=PUW31_01765;product=fimbrial usher protein StbD;protein_id=WJH09053.1;transl_table=11 CP118128.1 Genbank pseudogene 378984 381545 . - . ID=gene-PUW31_01770;Name=PUW31_01770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_01770;pseudo=true CP118128.1 Protein Homology CDS 378984 381545 . - 0 ID=cds-PUW31_01770;Parent=gene-PUW31_01770;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459333.1;locus_tag=PUW31_01770;product=fimbrial outer membrane usher protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 381529 382290 . - . ID=gene-PUW31_01775;Name=stbB;gbkey=Gene;gene=stbB;gene_biotype=protein_coding;locus_tag=PUW31_01775 CP118128.1 Protein Homology CDS 381529 382290 . - 0 ID=cds-WJH09054.1;Parent=gene-PUW31_01775;Dbxref=NCBI_GP:WJH09054.1;Name=WJH09054.1;gbkey=CDS;gene=stbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459334.1;locus_tag=PUW31_01775;product=fimbrial biogenesis chaperone StbB;protein_id=WJH09054.1;transl_table=11 CP118128.1 Genbank gene 382352 382888 . - . ID=gene-PUW31_01780;Name=PUW31_01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01780 CP118128.1 Protein Homology CDS 382352 382888 . - 0 ID=cds-WJH09055.1;Parent=gene-PUW31_01780;Dbxref=NCBI_GP:WJH09055.1;Name=WJH09055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459335.1;locus_tag=PUW31_01780;product=fimbrial protein;protein_id=WJH09055.1;transl_table=11 CP118128.1 Genbank gene 383551 383886 . + . ID=gene-PUW31_01785;Name=PUW31_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01785 CP118128.1 GeneMarkS-2+ CDS 383551 383886 . + 0 ID=cds-WJH09056.1;Parent=gene-PUW31_01785;Dbxref=NCBI_GP:WJH09056.1;Name=WJH09056.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_01785;product=hypothetical protein;protein_id=WJH09056.1;transl_table=11 CP118128.1 Genbank gene 383889 384284 . + . ID=gene-PUW31_01790;Name=PUW31_01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01790 CP118128.1 GeneMarkS-2+ CDS 383889 384284 . + 0 ID=cds-WJH09057.1;Parent=gene-PUW31_01790;Dbxref=NCBI_GP:WJH09057.1;Name=WJH09057.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_01790;product=hypothetical protein;protein_id=WJH09057.1;transl_table=11 CP118128.1 Genbank gene 384257 384556 . + . ID=gene-PUW31_01795;Name=PUW31_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01795 CP118128.1 Protein Homology CDS 384257 384556 . + 0 ID=cds-WJH09058.1;Parent=gene-PUW31_01795;Dbxref=NCBI_GP:WJH09058.1;Name=WJH09058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459337.1;locus_tag=PUW31_01795;product=hypothetical protein;protein_id=WJH09058.1;transl_table=11 CP118128.1 Genbank gene 385058 386632 . + . ID=gene-PUW31_01800;Name=PUW31_01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01800 CP118128.1 Protein Homology CDS 385058 386632 . + 0 ID=cds-WJH09059.1;Parent=gene-PUW31_01800;Dbxref=NCBI_GP:WJH09059.1;Name=WJH09059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459338.1;locus_tag=PUW31_01800;product=cyclic diguanylate phosphodiesterase;protein_id=WJH09059.1;transl_table=11 CP118128.1 Genbank gene 386732 387475 . + . ID=gene-PUW31_01805;Name=PUW31_01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01805 CP118128.1 Protein Homology CDS 386732 387475 . + 0 ID=cds-WJH09060.1;Parent=gene-PUW31_01805;Dbxref=NCBI_GP:WJH09060.1;Name=WJH09060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459339.1;locus_tag=PUW31_01805;product=response regulator;protein_id=WJH09060.1;transl_table=11 CP118128.1 Genbank gene 387448 387936 . + . ID=gene-PUW31_01810;Name=PUW31_01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01810 CP118128.1 Protein Homology CDS 387448 387936 . + 0 ID=cds-WJH09061.1;Parent=gene-PUW31_01810;Dbxref=NCBI_GP:WJH09061.1;Name=WJH09061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459340.1;locus_tag=PUW31_01810;product=hypothetical protein;protein_id=WJH09061.1;transl_table=11 CP118128.1 Genbank gene 388336 388860 . + . ID=gene-PUW31_01815;Name=PUW31_01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01815 CP118128.1 Protein Homology CDS 388336 388860 . + 0 ID=cds-WJH09062.1;Parent=gene-PUW31_01815;Dbxref=NCBI_GP:WJH09062.1;Name=WJH09062.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459341.1;locus_tag=PUW31_01815;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WJH09062.1;transl_table=11 CP118128.1 Genbank pseudogene 389004 389643 . + . ID=gene-PUW31_01820;Name=PUW31_01820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_01820;pseudo=true CP118128.1 Protein Homology CDS 389004 389643 . + 0 ID=cds-PUW31_01820;Parent=gene-PUW31_01820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459342.1;locus_tag=PUW31_01820;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 CP118128.1 Genbank gene 389654 389878 . + . ID=gene-PUW31_01825;Name=PUW31_01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01825 CP118128.1 Protein Homology CDS 389654 389878 . + 0 ID=cds-WJH09063.1;Parent=gene-PUW31_01825;Dbxref=NCBI_GP:WJH09063.1;Name=WJH09063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459343.1;locus_tag=PUW31_01825;product=hypothetical protein;protein_id=WJH09063.1;transl_table=11 CP118128.1 Genbank gene 389936 390295 . + . ID=gene-PUW31_01830;Name=PUW31_01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01830 CP118128.1 Protein Homology CDS 389936 390295 . + 0 ID=cds-WJH09064.1;Parent=gene-PUW31_01830;Dbxref=NCBI_GP:WJH09064.1;Name=WJH09064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459344.1;locus_tag=PUW31_01830;product=DUF4156 domain-containing protein;protein_id=WJH09064.1;transl_table=11 CP118128.1 Genbank gene 390365 391822 . - . ID=gene-PUW31_01835;Name=mdsC;gbkey=Gene;gene=mdsC;gene_biotype=protein_coding;locus_tag=PUW31_01835 CP118128.1 Protein Homology CDS 390365 391822 . - 0 ID=cds-WJH09065.1;Parent=gene-PUW31_01835;Dbxref=NCBI_GP:WJH09065.1;Name=WJH09065.1;gbkey=CDS;gene=mdsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521068.1;locus_tag=PUW31_01835;product=multidrug efflux transporter outer membrane subunit MdsC;protein_id=WJH09065.1;transl_table=11 CP118128.1 Genbank gene 391839 395006 . - . ID=gene-PUW31_01840;Name=mdsB;gbkey=Gene;gene=mdsB;gene_biotype=protein_coding;locus_tag=PUW31_01840 CP118128.1 Protein Homology CDS 391839 395006 . - 0 ID=cds-WJH09066.1;Parent=gene-PUW31_01840;Dbxref=NCBI_GP:WJH09066.1;Name=WJH09066.1;gbkey=CDS;gene=mdsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459346.1;locus_tag=PUW31_01840;product=multidrug efflux RND transporter permease subunit MdsB;protein_id=WJH09066.1;transl_table=11 CP118128.1 Genbank gene 395003 396229 . - . ID=gene-PUW31_01845;Name=mdsA;gbkey=Gene;gene=mdsA;gene_biotype=protein_coding;locus_tag=PUW31_01845 CP118128.1 Protein Homology CDS 395003 396229 . - 0 ID=cds-WJH09067.1;Parent=gene-PUW31_01845;Dbxref=NCBI_GP:WJH09067.1;Name=WJH09067.1;gbkey=CDS;gene=mdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459347.3;locus_tag=PUW31_01845;product=multidrug efflux RND transporter periplasmic adaptor subunit MdsA;protein_id=WJH09067.1;transl_table=11 CP118128.1 Genbank gene 396506 398809 . + . ID=gene-PUW31_01850;Name=golT;gbkey=Gene;gene=golT;gene_biotype=protein_coding;locus_tag=PUW31_01850 CP118128.1 Protein Homology CDS 396506 398809 . + 0 ID=cds-WJH09068.1;Parent=gene-PUW31_01850;Dbxref=NCBI_GP:WJH09068.1;Name=WJH09068.1;gbkey=CDS;gene=golT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083300.1;locus_tag=PUW31_01850;product=gold/copper-translocating P-type ATPase GolT;protein_id=WJH09068.1;transl_table=11 CP118128.1 Genbank gene 398806 399270 . + . ID=gene-PUW31_01855;Name=golS;gbkey=Gene;gene=golS;gene_biotype=protein_coding;locus_tag=PUW31_01855 CP118128.1 Protein Homology CDS 398806 399270 . + 0 ID=cds-WJH09069.1;Parent=gene-PUW31_01855;Dbxref=NCBI_GP:WJH09069.1;Name=WJH09069.1;gbkey=CDS;gene=golS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459349.1;locus_tag=PUW31_01855;product=Au(I) sensor transcriptional regulator GolS;protein_id=WJH09069.1;transl_table=11 CP118128.1 Genbank gene 399348 399542 . + . ID=gene-PUW31_01860;Name=golB;gbkey=Gene;gene=golB;gene_biotype=protein_coding;locus_tag=PUW31_01860 CP118128.1 Protein Homology CDS 399348 399542 . + 0 ID=cds-WJH09070.1;Parent=gene-PUW31_01860;Dbxref=NCBI_GP:WJH09070.1;Name=WJH09070.1;gbkey=CDS;gene=golB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459350.1;locus_tag=PUW31_01860;product=gold resistance metallochaperone GolB;protein_id=WJH09070.1;transl_table=11 CP118128.1 Genbank gene 399834 401087 . + . ID=gene-PUW31_01865;Name=PUW31_01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01865 CP118128.1 Protein Homology CDS 399834 401087 . + 0 ID=cds-WJH09071.1;Parent=gene-PUW31_01865;Dbxref=NCBI_GP:WJH09071.1;Name=WJH09071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459351.1;locus_tag=PUW31_01865;product=MFS transporter;protein_id=WJH09071.1;transl_table=11 CP118128.1 Genbank pseudogene 401276 403229 . + . ID=gene-PUW31_01870;Name=PUW31_01870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_01870;pseudo=true CP118128.1 Protein Homology CDS 401276 403229 . + 0 ID=cds-PUW31_01870;Parent=gene-PUW31_01870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459352.1;locus_tag=PUW31_01870;product=site-specific DNA-methyltransferase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 403239 406211 . + . ID=gene-PUW31_01875;Name=PUW31_01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01875 CP118128.1 Protein Homology CDS 403239 406211 . + 0 ID=cds-WJH10640.1;Parent=gene-PUW31_01875;Dbxref=NCBI_GP:WJH10640.1;Name=WJH10640.1;Ontology_term=GO:0003677,GO:0016788;gbkey=CDS;go_function=DNA binding|0003677||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=PUW31_01875;product=type III restriction-modification system endonuclease;protein_id=WJH10640.1;transl_table=11 CP118128.1 Genbank gene 406488 406589 . + . ID=gene-PUW31_01880;Name=ssaA;gbkey=Gene;gene=ssaA;gene_biotype=protein_coding;locus_tag=PUW31_01880 CP118128.1 Protein Homology CDS 406488 406589 . + 0 ID=cds-WJH09072.1;Parent=gene-PUW31_01880;Dbxref=NCBI_GP:WJH09072.1;Name=WJH09072.1;gbkey=CDS;gene=ssaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459354.1;locus_tag=PUW31_01880;product=small effector SsaA;protein_id=WJH09072.1;transl_table=11 CP118128.1 Genbank gene 406706 408109 . + . ID=gene-PUW31_01885;Name=PUW31_01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01885 CP118128.1 Protein Homology CDS 406706 408109 . + 0 ID=cds-WJH09073.1;Parent=gene-PUW31_01885;Dbxref=NCBI_GP:WJH09073.1;Name=WJH09073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459355.1;locus_tag=PUW31_01885;product=cytochrome ubiquinol oxidase subunit I;protein_id=WJH09073.1;transl_table=11 CP118128.1 Genbank pseudogene 408106 409115 . + . ID=gene-PUW31_01890;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=pseudogene;locus_tag=PUW31_01890;pseudo=true CP118128.1 Protein Homology CDS 408106 409115 . + 0 ID=cds-PUW31_01890;Parent=gene-PUW31_01890;Note=frameshifted;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459356.1;locus_tag=PUW31_01890;product=cytochrome d ubiquinol oxidase subunit II;pseudo=true;transl_table=11 CP118128.1 Genbank gene 409115 409246 . + . ID=gene-PUW31_01895;Name=PUW31_01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01895 CP118128.1 Protein Homology CDS 409115 409246 . + 0 ID=cds-WJH09074.1;Parent=gene-PUW31_01895;Dbxref=NCBI_GP:WJH09074.1;Name=WJH09074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241460.1;locus_tag=PUW31_01895;product=DUF2474 domain-containing protein;protein_id=WJH09074.1;transl_table=11 CP118128.1 Genbank pseudogene 409453 410458 . + . ID=gene-PUW31_01900;Name=foxR;gbkey=Gene;gene=foxR;gene_biotype=pseudogene;locus_tag=PUW31_01900;pseudo=true CP118128.1 Protein Homology CDS 409453 410458 . + 0 ID=cds-PUW31_01900;Parent=gene-PUW31_01900;Note=frameshifted;gbkey=CDS;gene=foxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459358.1;locus_tag=PUW31_01900;product=ferrioxamine uptake transcriptional regulator FoxR;pseudo=true;transl_table=11 CP118128.1 Genbank gene 410604 412712 . + . ID=gene-PUW31_01905;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=PUW31_01905 CP118128.1 Protein Homology CDS 410604 412712 . + 0 ID=cds-WJH09075.1;Parent=gene-PUW31_01905;Dbxref=NCBI_GP:WJH09075.1;Name=WJH09075.1;gbkey=CDS;gene=foxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=PUW31_01905;product=ferrioxamine B receptor FoxA;protein_id=WJH09075.1;transl_table=11 CP118128.1 Genbank gene 412753 413385 . - . ID=gene-PUW31_01910;Name=PUW31_01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01910 CP118128.1 Protein Homology CDS 412753 413385 . - 0 ID=cds-WJH09076.1;Parent=gene-PUW31_01910;Dbxref=NCBI_GP:WJH09076.1;Name=WJH09076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459360.1;locus_tag=PUW31_01910;product=LysE family transporter;protein_id=WJH09076.1;transl_table=11 CP118128.1 Genbank gene 413617 413892 . + . ID=gene-PUW31_01915;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=PUW31_01915 CP118128.1 Protein Homology CDS 413617 413892 . + 0 ID=cds-WJH09077.1;Parent=gene-PUW31_01915;Dbxref=NCBI_GP:WJH09077.1;Name=WJH09077.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459361.1;locus_tag=PUW31_01915;product=DUF1471 family periplasmic protein YahO;protein_id=WJH09077.1;transl_table=11 CP118128.1 Genbank gene 414028 415653 . - . ID=gene-PUW31_01920;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=PUW31_01920 CP118128.1 Protein Homology CDS 414028 415653 . - 0 ID=cds-WJH09078.1;Parent=gene-PUW31_01920;Dbxref=NCBI_GP:WJH09078.1;Name=WJH09078.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459362.1;locus_tag=PUW31_01920;product=propionate catabolism operon regulatory protein PrpR;protein_id=WJH09078.1;transl_table=11 CP118128.1 Genbank gene 415919 416806 . + . ID=gene-PUW31_01925;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=PUW31_01925 CP118128.1 Protein Homology CDS 415919 416806 . + 0 ID=cds-WJH09079.1;Parent=gene-PUW31_01925;Dbxref=NCBI_GP:WJH09079.1;Name=WJH09079.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459363.1;locus_tag=PUW31_01925;product=methylisocitrate lyase;protein_id=WJH09079.1;transl_table=11 CP118128.1 Genbank gene 416929 418098 . + . ID=gene-PUW31_01930;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=PUW31_01930 CP118128.1 Protein Homology CDS 416929 418098 . + 0 ID=cds-WJH09080.1;Parent=gene-PUW31_01930;Dbxref=NCBI_GP:WJH09080.1;Name=WJH09080.1;Ontology_term=GO:0050440;gbkey=CDS;gene=prpC;go_function=2-methylcitrate synthase activity|0050440||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459364.1;locus_tag=PUW31_01930;product=2-methylcitrate synthase;protein_id=WJH09080.1;transl_table=11 CP118128.1 Genbank gene 418136 419587 . + . ID=gene-PUW31_01935;Name=PUW31_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01935 CP118128.1 Protein Homology CDS 418136 419587 . + 0 ID=cds-WJH09081.1;Parent=gene-PUW31_01935;Dbxref=NCBI_GP:WJH09081.1;Name=WJH09081.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414868.1;locus_tag=PUW31_01935;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=WJH09081.1;transl_table=11 CP118128.1 Genbank gene 419628 421514 . + . ID=gene-PUW31_01940;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=PUW31_01940 CP118128.1 Protein Homology CDS 419628 421514 . + 0 ID=cds-WJH09082.1;Parent=gene-PUW31_01940;Dbxref=NCBI_GP:WJH09082.1;Name=WJH09082.1;Ontology_term=GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459366.1;locus_tag=PUW31_01940;product=propionate--CoA ligase;protein_id=WJH09082.1;transl_table=11 CP118128.1 Genbank gene 421618 422592 . - . ID=gene-PUW31_01945;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=PUW31_01945 CP118128.1 Protein Homology CDS 421618 422592 . - 0 ID=cds-WJH09083.1;Parent=gene-PUW31_01945;Dbxref=NCBI_GP:WJH09083.1;Name=WJH09083.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459367.1;locus_tag=PUW31_01945;product=porphobilinogen synthase;protein_id=WJH09083.1;transl_table=11 CP118128.1 Genbank gene 423106 426120 . + . ID=gene-PUW31_01950;Name=ehaB;gbkey=Gene;gene=ehaB;gene_biotype=protein_coding;locus_tag=PUW31_01950 CP118128.1 Protein Homology CDS 423106 426120 . + 0 ID=cds-WJH09084.1;Parent=gene-PUW31_01950;Dbxref=NCBI_GP:WJH09084.1;Name=WJH09084.1;gbkey=CDS;gene=ehaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000556401.1;locus_tag=PUW31_01950;product=autotransporter adhesin EhaB;protein_id=WJH09084.1;transl_table=11 CP118128.1 Genbank gene 426206 426829 . + . ID=gene-PUW31_01955;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=PUW31_01955 CP118128.1 Protein Homology CDS 426206 426829 . + 0 ID=cds-WJH09085.1;Parent=gene-PUW31_01955;Dbxref=NCBI_GP:WJH09085.1;Name=WJH09085.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459369.1;locus_tag=PUW31_01955;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WJH09085.1;transl_table=11 CP118128.1 Genbank gene 426874 428031 . - . ID=gene-PUW31_01960;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=PUW31_01960 CP118128.1 Protein Homology CDS 426874 428031 . - 0 ID=cds-WJH09086.1;Parent=gene-PUW31_01960;Dbxref=NCBI_GP:WJH09086.1;Name=WJH09086.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=PUW31_01960;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WJH09086.1;transl_table=11 CP118128.1 Genbank gene 428378 429598 . + . ID=gene-PUW31_01965;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=PUW31_01965 CP118128.1 Protein Homology CDS 428378 429598 . + 0 ID=cds-WJH10641.1;Parent=gene-PUW31_01965;Dbxref=NCBI_GP:WJH10641.1;Name=WJH10641.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459371.1;locus_tag=PUW31_01965;product=peptide antibiotic transporter SbmA;protein_id=WJH10641.1;transl_table=11 CP118128.1 Genbank gene 429613 430707 . + . ID=gene-PUW31_01970;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=PUW31_01970 CP118128.1 Protein Homology CDS 429613 430707 . + 0 ID=cds-WJH09087.1;Parent=gene-PUW31_01970;Dbxref=NCBI_GP:WJH09087.1;Name=WJH09087.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459372.1;locus_tag=PUW31_01970;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WJH09087.1;transl_table=11 CP118128.1 Genbank gene 430745 431053 . - . ID=gene-PUW31_01975;Name=PUW31_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01975 CP118128.1 Protein Homology CDS 430745 431053 . - 0 ID=cds-WJH09088.1;Parent=gene-PUW31_01975;Dbxref=NCBI_GP:WJH09088.1;Name=WJH09088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459373.1;locus_tag=PUW31_01975;product=YaiY family protein;protein_id=WJH09088.1;transl_table=11 CP118128.1 Genbank gene 431321 431536 . + . ID=gene-PUW31_01980;Name=PUW31_01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01980 CP118128.1 Protein Homology CDS 431321 431536 . + 0 ID=cds-WJH09089.1;Parent=gene-PUW31_01980;Dbxref=NCBI_GP:WJH09089.1;Name=WJH09089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459374.1;locus_tag=PUW31_01980;product=DUF2754 family protein;protein_id=WJH09089.1;transl_table=11 CP118128.1 Genbank gene 431562 432656 . - . ID=gene-PUW31_01985;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=PUW31_01985 CP118128.1 Protein Homology CDS 431562 432656 . - 0 ID=cds-WJH09090.1;Parent=gene-PUW31_01985;Dbxref=NCBI_GP:WJH09090.1;Name=WJH09090.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459375.1;locus_tag=PUW31_01985;product=D-alanine--D-alanine ligase;protein_id=WJH09090.1;transl_table=11 CP118128.1 Genbank gene 432734 433447 . + . ID=gene-PUW31_01990;Name=PUW31_01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_01990 CP118128.1 Protein Homology CDS 432734 433447 . + 0 ID=cds-WJH09091.1;Parent=gene-PUW31_01990;Dbxref=NCBI_GP:WJH09091.1;Name=WJH09091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459376.1;locus_tag=PUW31_01990;product=extensin family protein;protein_id=WJH09091.1;transl_table=11 CP118128.1 Genbank pseudogene 433616 434827 . + . ID=gene-PUW31_01995;Name=PUW31_01995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_01995;pseudo=true CP118128.1 Protein Homology CDS 433616 434827 . + 0 ID=cds-PUW31_01995;Parent=gene-PUW31_01995;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459377.1;locus_tag=PUW31_01995;product=multidrug efflux MFS transporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 435124 435384 . + . ID=gene-PUW31_02000;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=PUW31_02000 CP118128.1 Protein Homology CDS 435124 435384 . + 0 ID=cds-WJH09092.1;Parent=gene-PUW31_02000;Dbxref=NCBI_GP:WJH09092.1;Name=WJH09092.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748986.1;locus_tag=PUW31_02000;product=anti-adapter protein IraP;protein_id=WJH09092.1;transl_table=11 CP118128.1 Genbank gene 435733 436053 . + . ID=gene-PUW31_02005;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=PUW31_02005 CP118128.1 Protein Homology CDS 435733 436053 . + 0 ID=cds-WJH09093.1;Parent=gene-PUW31_02005;Dbxref=NCBI_GP:WJH09093.1;Name=WJH09093.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459379.1;locus_tag=PUW31_02005;product=phosphate starvation-inducible protein PsiF;protein_id=WJH09093.1;transl_table=11 CP118128.1 Genbank gene 436145 437257 . + . ID=gene-PUW31_02010;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=PUW31_02010 CP118128.1 Protein Homology CDS 436145 437257 . + 0 ID=cds-WJH09094.1;Parent=gene-PUW31_02010;Dbxref=NCBI_GP:WJH09094.1;Name=WJH09094.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459380.1;locus_tag=PUW31_02010;product=diguanylate cyclase AdrA;protein_id=WJH09094.1;transl_table=11 CP118128.1 Genbank gene 437272 438081 . - . ID=gene-PUW31_02015;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=PUW31_02015 CP118128.1 Protein Homology CDS 437272 438081 . - 0 ID=cds-WJH09095.1;Parent=gene-PUW31_02015;Dbxref=NCBI_GP:WJH09095.1;Name=WJH09095.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459381.1;locus_tag=PUW31_02015;product=pyrroline-5-carboxylate reductase;protein_id=WJH09095.1;transl_table=11 CP118128.1 Genbank pseudogene 438221 438376 . + . ID=gene-PUW31_02020;Name=PUW31_02020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_02020;pseudo=true CP118128.1 Protein Homology CDS 438221 438376 . + 0 ID=cds-PUW31_02020;Parent=gene-PUW31_02020;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459382.1;locus_tag=PUW31_02020;product=YaiI/YqxD family protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 438603 439148 . + . ID=gene-PUW31_02025;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=PUW31_02025 CP118128.1 Protein Homology CDS 438603 439148 . + 0 ID=cds-WJH09096.1;Parent=gene-PUW31_02025;Dbxref=NCBI_GP:WJH09096.1;Name=WJH09096.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459383.1;locus_tag=PUW31_02025;product=shikimate kinase AroL;protein_id=WJH09096.1;transl_table=11 CP118128.1 Genbank gene 439175 439366 . + . ID=gene-PUW31_02030;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=PUW31_02030 CP118128.1 Protein Homology CDS 439175 439366 . + 0 ID=cds-WJH09097.1;Parent=gene-PUW31_02030;Dbxref=NCBI_GP:WJH09097.1;Name=WJH09097.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459384.1;locus_tag=PUW31_02030;product=protein YaiA;protein_id=WJH09097.1;transl_table=11 CP118128.1 Genbank gene 439617 440294 . + . ID=gene-PUW31_02035;Name=PUW31_02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02035 CP118128.1 Protein Homology CDS 439617 440294 . + 0 ID=cds-WJH10642.1;Parent=gene-PUW31_02035;Dbxref=NCBI_GP:WJH10642.1;Name=WJH10642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459385.1;locus_tag=PUW31_02035;product=AroM family protein;protein_id=WJH10642.1;transl_table=11 CP118128.1 Genbank gene 440365 440649 . + . ID=gene-PUW31_02040;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=PUW31_02040 CP118128.1 Protein Homology CDS 440365 440649 . + 0 ID=cds-WJH09098.1;Parent=gene-PUW31_02040;Dbxref=NCBI_GP:WJH09098.1;Name=WJH09098.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459386.1;locus_tag=PUW31_02040;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WJH09098.1;transl_table=11 CP118128.1 Genbank gene 440687 441598 . - . ID=gene-PUW31_02045;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=PUW31_02045 CP118128.1 Protein Homology CDS 440687 441598 . - 0 ID=cds-WJH09099.1;Parent=gene-PUW31_02045;Dbxref=NCBI_GP:WJH09099.1;Name=WJH09099.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=PUW31_02045;product=recombination-associated protein RdgC;protein_id=WJH09099.1;transl_table=11 CP118128.1 Genbank gene 441724 442632 . + . ID=gene-PUW31_02050;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=PUW31_02050 CP118128.1 Protein Homology CDS 441724 442632 . + 0 ID=cds-WJH09100.1;Parent=gene-PUW31_02050;Dbxref=NCBI_GP:WJH09100.1;Name=WJH09100.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459388.1;locus_tag=PUW31_02050;product=fructokinase;protein_id=WJH09100.1;transl_table=11 CP118128.1 Genbank gene 442654 443826 . - . ID=gene-PUW31_02055;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=PUW31_02055 CP118128.1 Protein Homology CDS 442654 443826 . - 0 ID=cds-WJH09101.1;Parent=gene-PUW31_02055;Dbxref=NCBI_GP:WJH09101.1;Name=WJH09101.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459389.1;locus_tag=PUW31_02055;product=MFS transporter AraJ;protein_id=WJH09101.1;transl_table=11 CP118128.1 Genbank gene 443999 447139 . - . ID=gene-PUW31_02060;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=PUW31_02060 CP118128.1 Protein Homology CDS 443999 447139 . - 0 ID=cds-WJH09102.1;Parent=gene-PUW31_02060;Dbxref=NCBI_GP:WJH09102.1;Name=WJH09102.1;gbkey=CDS;gene=sbcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459390.1;locus_tag=PUW31_02060;product=exonuclease subunit SbcC;protein_id=WJH09102.1;transl_table=11 CP118128.1 Genbank gene 447136 448338 . - . ID=gene-PUW31_02065;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=PUW31_02065 CP118128.1 Protein Homology CDS 447136 448338 . - 0 ID=cds-WJH09103.1;Parent=gene-PUW31_02065;Dbxref=NCBI_GP:WJH09103.1;Name=WJH09103.1;Ontology_term=GO:0006259,GO:0008408;gbkey=CDS;gene=sbcD;go_function=3'-5' exonuclease activity|0008408||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459391.1;locus_tag=PUW31_02065;product=exonuclease subunit SbcD;protein_id=WJH09103.1;transl_table=11 CP118128.1 Genbank gene 448553 449242 . + . ID=gene-PUW31_02070;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=PUW31_02070 CP118128.1 Protein Homology CDS 448553 449242 . + 0 ID=cds-WJH09104.1;Parent=gene-PUW31_02070;Dbxref=NCBI_GP:WJH09104.1;Name=WJH09104.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=PUW31_02070;product=phosphate response regulator transcription factor PhoB;protein_id=WJH09104.1;transl_table=11 CP118128.1 Genbank gene 449312 450607 . + . ID=gene-PUW31_02075;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=PUW31_02075 CP118128.1 Protein Homology CDS 449312 450607 . + 0 ID=cds-WJH09105.1;Parent=gene-PUW31_02075;Dbxref=NCBI_GP:WJH09105.1;Name=WJH09105.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459393.1;locus_tag=PUW31_02075;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WJH09105.1;transl_table=11 CP118128.1 Genbank gene 451016 452335 . + . ID=gene-PUW31_02080;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=PUW31_02080 CP118128.1 Protein Homology CDS 451016 452335 . + 0 ID=cds-WJH09106.1;Parent=gene-PUW31_02080;Dbxref=NCBI_GP:WJH09106.1;Name=WJH09106.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459394.1;locus_tag=PUW31_02080;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WJH09106.1;transl_table=11 CP118128.1 Genbank gene 452410 453780 . + . ID=gene-PUW31_02085;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=PUW31_02085 CP118128.1 Protein Homology CDS 452410 453780 . + 0 ID=cds-WJH10643.1;Parent=gene-PUW31_02085;Dbxref=NCBI_GP:WJH10643.1;Name=WJH10643.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459395.1;locus_tag=PUW31_02085;product=proline-specific permease ProY;protein_id=WJH10643.1;transl_table=11 CP118128.1 Genbank gene 453942 455759 . + . ID=gene-PUW31_02090;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=PUW31_02090 CP118128.1 Protein Homology CDS 453942 455759 . + 0 ID=cds-WJH09107.1;Parent=gene-PUW31_02090;Dbxref=NCBI_GP:WJH09107.1;Name=WJH09107.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459396.1;locus_tag=PUW31_02090;product=maltodextrin glucosidase;protein_id=WJH09107.1;transl_table=11 CP118128.1 Genbank gene 455831 456433 . - . ID=gene-PUW31_02095;Name=PUW31_02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02095 CP118128.1 Protein Homology CDS 455831 456433 . - 0 ID=cds-WJH09108.1;Parent=gene-PUW31_02095;Dbxref=NCBI_GP:WJH09108.1;Name=WJH09108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459397.1;locus_tag=PUW31_02095;product=peroxiredoxin;protein_id=WJH09108.1;transl_table=11 CP118128.1 Genbank gene 456642 457223 . - . ID=gene-PUW31_02100;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=PUW31_02100 CP118128.1 Protein Homology CDS 456642 457223 . - 0 ID=cds-WJH09109.1;Parent=gene-PUW31_02100;Dbxref=NCBI_GP:WJH09109.1;Name=WJH09109.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459398.1;locus_tag=PUW31_02100;product=ACP phosphodiesterase;protein_id=WJH09109.1;transl_table=11 CP118128.1 Genbank gene 457317 458381 . + . ID=gene-PUW31_02105;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=PUW31_02105 CP118128.1 Protein Homology CDS 457317 458381 . + 0 ID=cds-WJH09110.1;Parent=gene-PUW31_02105;Dbxref=NCBI_GP:WJH09110.1;Name=WJH09110.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459399.1;locus_tag=PUW31_02105;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WJH09110.1;transl_table=11 CP118128.1 Genbank gene 458578 459705 . + . ID=gene-PUW31_02110;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=PUW31_02110 CP118128.1 Protein Homology CDS 458578 459705 . + 0 ID=cds-WJH09111.1;Parent=gene-PUW31_02110;Dbxref=NCBI_GP:WJH09111.1;Name=WJH09111.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=PUW31_02110;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WJH09111.1;transl_table=11 CP118128.1 Genbank gene 459728 460060 . + . ID=gene-PUW31_02115;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=PUW31_02115 CP118128.1 Protein Homology CDS 459728 460060 . + 0 ID=cds-WJH09112.1;Parent=gene-PUW31_02115;Dbxref=NCBI_GP:WJH09112.1;Name=WJH09112.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=PUW31_02115;product=preprotein translocase subunit YajC;protein_id=WJH09112.1;transl_table=11 CP118128.1 Genbank pseudogene 460088 461934 . + . ID=gene-PUW31_02120;Name=secD;gbkey=Gene;gene=secD;gene_biotype=pseudogene;locus_tag=PUW31_02120;pseudo=true CP118128.1 Protein Homology CDS 460088 461934 . + 0 ID=cds-PUW31_02120;Parent=gene-PUW31_02120;Note=frameshifted;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=PUW31_02120;product=protein translocase subunit SecD;pseudo=true;transl_table=11 CP118128.1 Genbank gene 461945 462916 . + . ID=gene-PUW31_02125;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=PUW31_02125 CP118128.1 Protein Homology CDS 461945 462916 . + 0 ID=cds-WJH09113.1;Parent=gene-PUW31_02125;Dbxref=NCBI_GP:WJH09113.1;Name=WJH09113.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459403.1;locus_tag=PUW31_02125;product=protein translocase subunit SecF;protein_id=WJH09113.1;transl_table=11 CP118128.1 Genbank gene 463061 463426 . + . ID=gene-PUW31_02130;Name=PUW31_02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02130 CP118128.1 Protein Homology CDS 463061 463426 . + 0 ID=cds-WJH09114.1;Parent=gene-PUW31_02130;Dbxref=NCBI_GP:WJH09114.1;Name=WJH09114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459404.1;locus_tag=PUW31_02130;product=VOC family protein;protein_id=WJH09114.1;transl_table=11 CP118128.1 Genbank gene 463452 464144 . + . ID=gene-PUW31_02135;Name=PUW31_02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02135 CP118128.1 Protein Homology CDS 463452 464144 . + 0 ID=cds-WJH09115.1;Parent=gene-PUW31_02135;Dbxref=NCBI_GP:WJH09115.1;Name=WJH09115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459405.1;locus_tag=PUW31_02135;product=YafY family protein;protein_id=WJH09115.1;transl_table=11 CP118128.1 Genbank gene 464314 464661 . + . ID=gene-PUW31_02140;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=PUW31_02140 CP118128.1 Protein Homology CDS 464314 464661 . + 0 ID=cds-WJH09116.1;Parent=gene-PUW31_02140;Dbxref=NCBI_GP:WJH09116.1;Name=WJH09116.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459406.1;locus_tag=PUW31_02140;product=HNH nuclease YajD;protein_id=WJH09116.1;transl_table=11 CP118128.1 Genbank gene 465099 465206 . + . ID=gene-PUW31_02145;Name=PUW31_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02145 CP118128.1 Protein Homology CDS 465099 465206 . + 0 ID=cds-WJH09117.1;Parent=gene-PUW31_02145;Dbxref=NCBI_GP:WJH09117.1;Name=WJH09117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000176312.1;locus_tag=PUW31_02145;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WJH09117.1;transl_table=11 CP118128.1 Genbank gene 465290 466153 . - . ID=gene-PUW31_02150;Name=PUW31_02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02150 CP118128.1 Protein Homology CDS 465290 466153 . - 0 ID=cds-WJH09118.1;Parent=gene-PUW31_02150;Dbxref=NCBI_GP:WJH09118.1;Name=WJH09118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459408.1;locus_tag=PUW31_02150;product=nucleoside-specific channel-forming protein Tsx;protein_id=WJH09118.1;transl_table=11 CP118128.1 Genbank gene 466453 466992 . - . ID=gene-PUW31_02155;Name=PUW31_02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02155 CP118128.1 Protein Homology CDS 466453 466992 . - 0 ID=cds-WJH09119.1;Parent=gene-PUW31_02155;Dbxref=NCBI_GP:WJH09119.1;Name=WJH09119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459409.1;locus_tag=PUW31_02155;product=DUF3251 domain-containing protein;protein_id=WJH09119.1;transl_table=11 CP118128.1 Genbank gene 467144 467593 . + . ID=gene-PUW31_02160;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=PUW31_02160 CP118128.1 Protein Homology CDS 467144 467593 . + 0 ID=cds-WJH09120.1;Parent=gene-PUW31_02160;Dbxref=NCBI_GP:WJH09120.1;Name=WJH09120.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=PUW31_02160;product=transcriptional regulator NrdR;protein_id=WJH09120.1;transl_table=11 CP118128.1 Genbank gene 467597 468700 . + . ID=gene-PUW31_02165;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=PUW31_02165 CP118128.1 Protein Homology CDS 467597 468700 . + 0 ID=cds-WJH09121.1;Parent=gene-PUW31_02165;Dbxref=NCBI_GP:WJH09121.1;Name=WJH09121.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459411.1;locus_tag=PUW31_02165;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WJH09121.1;transl_table=11 CP118128.1 Genbank gene 468789 469259 . + . ID=gene-PUW31_02170;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=PUW31_02170 CP118128.1 Protein Homology CDS 468789 469259 . + 0 ID=cds-WJH09122.1;Parent=gene-PUW31_02170;Dbxref=NCBI_GP:WJH09122.1;Name=WJH09122.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribE;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=PUW31_02170;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WJH09122.1;transl_table=11 CP118128.1 Genbank gene 469280 469699 . + . ID=gene-PUW31_02175;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=PUW31_02175 CP118128.1 Protein Homology CDS 469280 469699 . + 0 ID=cds-WJH09123.1;Parent=gene-PUW31_02175;Dbxref=NCBI_GP:WJH09123.1;Name=WJH09123.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusB;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459413.1;locus_tag=PUW31_02175;product=transcription antitermination factor NusB;protein_id=WJH09123.1;transl_table=11 CP118128.1 Genbank gene 469778 470758 . + . ID=gene-PUW31_02180;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=PUW31_02180 CP118128.1 Protein Homology CDS 469778 470758 . + 0 ID=cds-WJH09124.1;Parent=gene-PUW31_02180;Dbxref=NCBI_GP:WJH09124.1;Name=WJH09124.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308497.1;locus_tag=PUW31_02180;product=thiamine-phosphate kinase;protein_id=WJH09124.1;transl_table=11 CP118128.1 Genbank gene 470736 471251 . + . ID=gene-PUW31_02185;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=PUW31_02185 CP118128.1 Protein Homology CDS 470736 471251 . + 0 ID=cds-WJH09125.1;Parent=gene-PUW31_02185;Dbxref=NCBI_GP:WJH09125.1;Name=WJH09125.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459415.1;locus_tag=PUW31_02185;product=phosphatidylglycerophosphatase A;protein_id=WJH09125.1;transl_table=11 CP118128.1 Genbank gene 471355 472329 . - . ID=gene-PUW31_02190;Name=PUW31_02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02190 CP118128.1 Protein Homology CDS 471355 472329 . - 0 ID=cds-WJH09126.1;Parent=gene-PUW31_02190;Dbxref=NCBI_GP:WJH09126.1;Name=WJH09126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459416.1;locus_tag=PUW31_02190;product=aldo/keto reductase;protein_id=WJH09126.1;transl_table=11 CP118128.1 Genbank pseudogene 472386 474247 . - . ID=gene-PUW31_02195;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=pseudogene;locus_tag=PUW31_02195;pseudo=true CP118128.1 Protein Homology CDS 472386 474247 . - 0 ID=cds-PUW31_02195;Parent=gene-PUW31_02195;Note=frameshifted;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459417.1;locus_tag=PUW31_02195;product=1-deoxy-D-xylulose-5-phosphate synthase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 474271 475170 . - . ID=gene-PUW31_02200;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=PUW31_02200 CP118128.1 Protein Homology CDS 474271 475170 . - 0 ID=cds-WJH09127.1;Parent=gene-PUW31_02200;Dbxref=NCBI_GP:WJH09127.1;Name=WJH09127.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459418.1;locus_tag=PUW31_02200;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WJH09127.1;transl_table=11 CP118128.1 Genbank gene 475171 475413 . - . ID=gene-PUW31_02205;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=PUW31_02205 CP118128.1 Protein Homology CDS 475171 475413 . - 0 ID=cds-WJH09128.1;Parent=gene-PUW31_02205;Dbxref=NCBI_GP:WJH09128.1;Name=WJH09128.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459419.1;locus_tag=PUW31_02205;product=exodeoxyribonuclease VII small subunit;protein_id=WJH09128.1;transl_table=11 CP118128.1 Genbank gene 475623 477071 . + . ID=gene-PUW31_02210;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=PUW31_02210 CP118128.1 Protein Homology CDS 475623 477071 . + 0 ID=cds-WJH09129.1;Parent=gene-PUW31_02210;Dbxref=NCBI_GP:WJH09129.1;Name=WJH09129.1;Ontology_term=GO:0006400,GO:0009228,GO:0003824;gbkey=CDS;gene=thiI;go_function=catalytic activity|0003824||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=PUW31_02210;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=WJH09129.1;transl_table=11 CP118128.1 Genbank gene 477115 477912 . - . ID=gene-PUW31_02215;Name=phnV;gbkey=Gene;gene=phnV;gene_biotype=protein_coding;locus_tag=PUW31_02215 CP118128.1 Protein Homology CDS 477115 477912 . - 0 ID=cds-WJH09130.1;Parent=gene-PUW31_02215;Dbxref=NCBI_GP:WJH09130.1;Name=WJH09130.1;Ontology_term=GO:0033223,GO:0033225,GO:0005886,GO:0055052;gbkey=CDS;gene=phnV;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459421.1;locus_tag=PUW31_02215;product=2-aminoethylphosphonate ABC transport system%2C membrane component PhnV;protein_id=WJH09130.1;transl_table=11 CP118128.1 Genbank pseudogene 477906 478774 . - . ID=gene-PUW31_02220;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=pseudogene;locus_tag=PUW31_02220;pseudo=true CP118128.1 Protein Homology CDS 477906 478774 . - 0 ID=cds-PUW31_02220;Parent=gene-PUW31_02220;Note=frameshifted;Ontology_term=GO:0033223,GO:0033225,GO:0005886,GO:0055052;gbkey=CDS;gene=phnU;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052714.1;locus_tag=PUW31_02220;product=2-aminoethylphosphonate ABC transporter permease subunit;pseudo=true;transl_table=11 CP118128.1 Genbank gene 478777 479886 . - . ID=gene-PUW31_02225;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=PUW31_02225 CP118128.1 Protein Homology CDS 478777 479886 . - 0 ID=cds-WJH09131.1;Parent=gene-PUW31_02225;Dbxref=NCBI_GP:WJH09131.1;Name=WJH09131.1;Ontology_term=GO:0033223,GO:0005524,GO:0033225,GO:0009898,GO:0055052;gbkey=CDS;gene=phnT;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459423.1;locus_tag=PUW31_02225;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=WJH09131.1;transl_table=11 CP118128.1 Genbank gene 479892 480905 . - . ID=gene-PUW31_02230;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=PUW31_02230 CP118128.1 Protein Homology CDS 479892 480905 . - 0 ID=cds-WJH09132.1;Parent=gene-PUW31_02230;Dbxref=NCBI_GP:WJH09132.1;Name=WJH09132.1;Ontology_term=GO:0033223,GO:0033225,GO:0033226,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=phnS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA,2-aminoethylphosphonate binding|0033226||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459424.1;locus_tag=PUW31_02230;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WJH09132.1;transl_table=11 CP118128.1 Genbank gene 481103 481822 . - . ID=gene-PUW31_02235;Name=phnR;gbkey=Gene;gene=phnR;gene_biotype=protein_coding;locus_tag=PUW31_02235 CP118128.1 Protein Homology CDS 481103 481822 . - 0 ID=cds-WJH09133.1;Parent=gene-PUW31_02235;Dbxref=NCBI_GP:WJH09133.1;Name=WJH09133.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=phnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459425.1;locus_tag=PUW31_02235;product=phosphonate utilization transcriptional regulator PhnR;protein_id=WJH09133.1;transl_table=11 CP118128.1 Genbank gene 481962 483065 . + . ID=gene-PUW31_02240;Name=phnW;gbkey=Gene;gene=phnW;gene_biotype=protein_coding;locus_tag=PUW31_02240 CP118128.1 Protein Homology CDS 481962 483065 . + 0 ID=cds-WJH09134.1;Parent=gene-PUW31_02240;Dbxref=NCBI_GP:WJH09134.1;Name=WJH09134.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;gene=phnW;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459426.1;locus_tag=PUW31_02240;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WJH09134.1;transl_table=11 CP118128.1 Genbank gene 483075 483884 . + . ID=gene-PUW31_02245;Name=PUW31_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02245 CP118128.1 Protein Homology CDS 483075 483884 . + 0 ID=cds-WJH10644.1;Parent=gene-PUW31_02245;Dbxref=NCBI_GP:WJH10644.1;Name=WJH10644.1;Ontology_term=GO:0019700,GO:0050194;gbkey=CDS;go_function=phosphonoacetaldehyde hydrolase activity|0050194||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229535.1;locus_tag=PUW31_02245;product=phosphonoacetaldehyde hydrolase;protein_id=WJH10644.1;transl_table=11 CP118128.1 Genbank gene 484027 484617 . - . ID=gene-PUW31_02250;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=PUW31_02250 CP118128.1 Protein Homology CDS 484027 484617 . - 0 ID=cds-WJH09135.1;Parent=gene-PUW31_02250;Dbxref=NCBI_GP:WJH09135.1;Name=WJH09135.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459428.1;locus_tag=PUW31_02250;product=protein deglycase YajL;protein_id=WJH09135.1;transl_table=11 CP118128.1 Genbank gene 484580 485491 . - . ID=gene-PUW31_02255;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=PUW31_02255 CP118128.1 Protein Homology CDS 484580 485491 . - 0 ID=cds-WJH09136.1;Parent=gene-PUW31_02255;Dbxref=NCBI_GP:WJH09136.1;Name=WJH09136.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459429.1;locus_tag=PUW31_02255;product=2-dehydropantoate 2-reductase;protein_id=WJH09136.1;transl_table=11 CP118128.1 Genbank gene 485617 486108 . + . ID=gene-PUW31_02260;Name=PUW31_02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02260 CP118128.1 Protein Homology CDS 485617 486108 . + 0 ID=cds-WJH09137.1;Parent=gene-PUW31_02260;Dbxref=NCBI_GP:WJH09137.1;Name=WJH09137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=PUW31_02260;product=YajQ family cyclic di-GMP-binding protein;protein_id=WJH09137.1;transl_table=11 CP118128.1 Genbank gene 486155 487519 . - . ID=gene-PUW31_02265;Name=PUW31_02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02265 CP118128.1 Protein Homology CDS 486155 487519 . - 0 ID=cds-WJH09138.1;Parent=gene-PUW31_02265;Dbxref=NCBI_GP:WJH09138.1;Name=WJH09138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507029.1;locus_tag=PUW31_02265;product=MFS transporter;protein_id=WJH09138.1;transl_table=11 CP118128.1 Genbank pseudogene 488044 489554 . + . ID=gene-PUW31_02270;Name=PUW31_02270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_02270;pseudo=true CP118128.1 Protein Homology CDS 488044 489554 . + 0 ID=cds-PUW31_02270;Parent=gene-PUW31_02270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459433.1;locus_tag=PUW31_02270;product=tetratricopeptide repeat protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 489566 491059 . + . ID=gene-PUW31_02275;Name=PUW31_02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02275 CP118128.1 Protein Homology CDS 489566 491059 . + 0 ID=cds-WJH09139.1;Parent=gene-PUW31_02275;Dbxref=NCBI_GP:WJH09139.1;Name=WJH09139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595936.1;locus_tag=PUW31_02275;product=tetratricopeptide repeat protein;protein_id=WJH09139.1;transl_table=11 CP118128.1 Genbank gene 491141 492031 . - . ID=gene-PUW31_02280;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=PUW31_02280 CP118128.1 Protein Homology CDS 491141 492031 . - 0 ID=cds-WJH09140.1;Parent=gene-PUW31_02280;Dbxref=NCBI_GP:WJH09140.1;Name=WJH09140.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459435.1;locus_tag=PUW31_02280;product=heme o synthase;protein_id=WJH09140.1;transl_table=11 CP118128.1 Genbank gene 492043 492372 . - . ID=gene-PUW31_02285;Name=PUW31_02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02285 CP118128.1 Protein Homology CDS 492043 492372 . - 0 ID=cds-WJH09141.1;Parent=gene-PUW31_02285;Dbxref=NCBI_GP:WJH09141.1;Name=WJH09141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459436.1;locus_tag=PUW31_02285;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WJH09141.1;transl_table=11 CP118128.1 Genbank gene 492372 492986 . - . ID=gene-PUW31_02290;Name=PUW31_02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02290 CP118128.1 Protein Homology CDS 492372 492986 . - 0 ID=cds-WJH09142.1;Parent=gene-PUW31_02290;Dbxref=NCBI_GP:WJH09142.1;Name=WJH09142.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459437.1;locus_tag=PUW31_02290;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WJH09142.1;transl_table=11 CP118128.1 Genbank gene 492976 494967 . - . ID=gene-PUW31_02295;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=PUW31_02295 CP118128.1 Protein Homology CDS 492976 494967 . - 0 ID=cds-WJH09143.1;Parent=gene-PUW31_02295;Dbxref=NCBI_GP:WJH09143.1;Name=WJH09143.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=PUW31_02295;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WJH09143.1;transl_table=11 CP118128.1 Genbank gene 494978 495934 . - . ID=gene-PUW31_02300;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=PUW31_02300 CP118128.1 Protein Homology CDS 494978 495934 . - 0 ID=cds-WJH09144.1;Parent=gene-PUW31_02300;Dbxref=NCBI_GP:WJH09144.1;Name=WJH09144.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459439.1;locus_tag=PUW31_02300;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WJH09144.1;transl_table=11 CP118128.1 Genbank pseudogene 496386 497860 . - . ID=gene-PUW31_02305;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=pseudogene;locus_tag=PUW31_02305;pseudo=true CP118128.1 Protein Homology CDS 496386 497860 . - 0 ID=cds-PUW31_02305;Parent=gene-PUW31_02305;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459440.1;locus_tag=PUW31_02305;product=muropeptide MFS transporter AmpG;pseudo=true;transl_table=11 CP118128.1 Genbank gene 497904 498482 . - . ID=gene-PUW31_02310;Name=PUW31_02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02310 CP118128.1 Protein Homology CDS 497904 498482 . - 0 ID=cds-WJH09145.1;Parent=gene-PUW31_02310;Dbxref=NCBI_GP:WJH09145.1;Name=WJH09145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225436.1;locus_tag=PUW31_02310;product=lipoprotein;protein_id=WJH09145.1;transl_table=11 CP118128.1 Genbank gene 498786 499103 . + . ID=gene-PUW31_02315;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=PUW31_02315 CP118128.1 Protein Homology CDS 498786 499103 . + 0 ID=cds-WJH09146.1;Parent=gene-PUW31_02315;Dbxref=NCBI_GP:WJH09146.1;Name=WJH09146.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459442.1;locus_tag=PUW31_02315;product=transcriptional regulator BolA;protein_id=WJH09146.1;transl_table=11 CP118128.1 Genbank gene 499450 500748 . + . ID=gene-PUW31_02320;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=PUW31_02320 CP118128.1 Protein Homology CDS 499450 500748 . + 0 ID=cds-WJH09147.1;Parent=gene-PUW31_02320;Dbxref=NCBI_GP:WJH09147.1;Name=WJH09147.1;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=PUW31_02320;product=trigger factor;protein_id=WJH09147.1;transl_table=11 CP118128.1 Genbank gene 500996 501619 . + . ID=gene-PUW31_02325;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=PUW31_02325 CP118128.1 Protein Homology CDS 500996 501619 . + 0 ID=cds-WJH09148.1;Parent=gene-PUW31_02325;Dbxref=NCBI_GP:WJH09148.1;Name=WJH09148.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=PUW31_02325;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WJH09148.1;transl_table=11 CP118128.1 Genbank gene 501871 503142 . + . ID=gene-PUW31_02330;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=PUW31_02330 CP118128.1 Protein Homology CDS 501871 503142 . + 0 ID=cds-WJH09149.1;Parent=gene-PUW31_02330;Dbxref=NCBI_GP:WJH09149.1;Name=WJH09149.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0051082,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=PUW31_02330;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WJH09149.1;transl_table=11 CP118128.1 Genbank gene 503328 505682 . + . ID=gene-PUW31_02335;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=PUW31_02335 CP118128.1 Protein Homology CDS 503328 505682 . + 0 ID=cds-WJH09150.1;Parent=gene-PUW31_02335;Dbxref=NCBI_GP:WJH09150.1;Name=WJH09150.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=PUW31_02335;product=endopeptidase La;protein_id=WJH09150.1;transl_table=11 CP118128.1 Genbank gene 505873 506163 . + . ID=gene-PUW31_02340;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=PUW31_02340 CP118128.1 Protein Homology CDS 505873 506163 . + 0 ID=cds-WJH10645.1;Parent=gene-PUW31_02340;Dbxref=NCBI_GP:WJH10645.1;Name=WJH10645.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356995.1;locus_tag=PUW31_02340;product=DNA-binding protein HU-beta;protein_id=WJH10645.1;transl_table=11 CP118128.1 Genbank gene 506454 508325 . + . ID=gene-PUW31_02345;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=PUW31_02345 CP118128.1 Protein Homology CDS 506454 508325 . + 0 ID=cds-WJH09151.1;Parent=gene-PUW31_02345;Dbxref=NCBI_GP:WJH09151.1;Name=WJH09151.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459448.1;locus_tag=PUW31_02345;product=peptidylprolyl isomerase;protein_id=WJH09151.1;transl_table=11 CP118128.1 Genbank gene 508475 508849 . + . ID=gene-PUW31_02350;Name=PUW31_02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02350 CP118128.1 Protein Homology CDS 508475 508849 . + 0 ID=cds-WJH09152.1;Parent=gene-PUW31_02350;Dbxref=NCBI_GP:WJH09152.1;Name=WJH09152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459449.1;locus_tag=PUW31_02350;product=helix-hairpin-helix domain-containing protein;protein_id=WJH09152.1;transl_table=11 CP118128.1 Genbank pseudogene 508953 509349 . + . ID=gene-PUW31_02355;Name=PUW31_02355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_02355;pseudo=true CP118128.1 Protein Homology CDS 508953 509349 . + 0 ID=cds-PUW31_02355;Parent=gene-PUW31_02355;Note=frameshifted;Ontology_term=GO:0047617;gbkey=CDS;go_function=acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459450.1;locus_tag=PUW31_02355;product=YbgC/FadM family acyl-CoA thioesterase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 509455 510150 . - . ID=gene-PUW31_02360;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=PUW31_02360 CP118128.1 Protein Homology CDS 509455 510150 . - 0 ID=cds-WJH09153.1;Parent=gene-PUW31_02360;Dbxref=NCBI_GP:WJH09153.1;Name=WJH09153.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459451.1;locus_tag=PUW31_02360;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WJH09153.1;transl_table=11 CP118128.1 Genbank gene 510215 511915 . - . ID=gene-PUW31_02365;Name=PUW31_02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02365 CP118128.1 Protein Homology CDS 510215 511915 . - 0 ID=cds-WJH09154.1;Parent=gene-PUW31_02365;Dbxref=NCBI_GP:WJH09154.1;Name=WJH09154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459452.1;locus_tag=PUW31_02365;product=SgrR family transcriptional regulator;protein_id=WJH09154.1;transl_table=11 CP118128.1 Genbank pseudogene 512016 512833 . + . ID=gene-PUW31_02370;Name=cof;gbkey=Gene;gene=cof;gene_biotype=pseudogene;locus_tag=PUW31_02370;pseudo=true CP118128.1 Protein Homology CDS 512016 512833 . + 0 ID=cds-PUW31_02370;Parent=gene-PUW31_02370;Note=frameshifted;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459453.1;locus_tag=PUW31_02370;product=HMP-PP phosphatase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 512883 513938 . - . ID=gene-PUW31_02375;Name=cdsH;gbkey=Gene;gene=cdsH;gene_biotype=protein_coding;locus_tag=PUW31_02375 CP118128.1 Protein Homology CDS 512883 513938 . - 0 ID=cds-WJH09155.1;Parent=gene-PUW31_02375;Dbxref=NCBI_GP:WJH09155.1;Name=WJH09155.1;gbkey=CDS;gene=cdsH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459454.1;locus_tag=PUW31_02375;product=cysteine desulfhydrase;protein_id=WJH09155.1;transl_table=11 CP118128.1 Genbank gene 514051 514509 . + . ID=gene-PUW31_02380;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=PUW31_02380 CP118128.1 Protein Homology CDS 514051 514509 . + 0 ID=cds-WJH09156.1;Parent=gene-PUW31_02380;Dbxref=NCBI_GP:WJH09156.1;Name=WJH09156.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459455.1;locus_tag=PUW31_02380;product=DNA-binding transcriptional regulator DecR;protein_id=WJH09156.1;transl_table=11 CP118128.1 Genbank gene 514550 516322 . + . ID=gene-PUW31_02385;Name=PUW31_02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02385 CP118128.1 Protein Homology CDS 514550 516322 . + 0 ID=cds-WJH09157.1;Parent=gene-PUW31_02385;Dbxref=NCBI_GP:WJH09157.1;Name=WJH09157.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459456.1;locus_tag=PUW31_02385;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WJH09157.1;transl_table=11 CP118128.1 Genbank gene 516315 518096 . + . ID=gene-PUW31_02390;Name=PUW31_02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02390 CP118128.1 Protein Homology CDS 516315 518096 . + 0 ID=cds-WJH09158.1;Parent=gene-PUW31_02390;Dbxref=NCBI_GP:WJH09158.1;Name=WJH09158.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459457.1;locus_tag=PUW31_02390;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WJH09158.1;transl_table=11 CP118128.1 Genbank gene 518309 518647 . + . ID=gene-PUW31_02395;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=PUW31_02395 CP118128.1 Protein Homology CDS 518309 518647 . + 0 ID=cds-WJH09159.1;Parent=gene-PUW31_02395;Dbxref=NCBI_GP:WJH09159.1;Name=WJH09159.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459458.1;locus_tag=PUW31_02395;product=P-II family nitrogen regulator;protein_id=WJH09159.1;transl_table=11 CP118128.1 Genbank gene 518679 519965 . + . ID=gene-PUW31_02400;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=PUW31_02400 CP118128.1 Protein Homology CDS 518679 519965 . + 0 ID=cds-WJH09160.1;Parent=gene-PUW31_02400;Dbxref=NCBI_GP:WJH09160.1;Name=WJH09160.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium transmembrane transporter activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459459.1;locus_tag=PUW31_02400;product=ammonium transporter AmtB;protein_id=WJH09160.1;transl_table=11 CP118128.1 Genbank gene 520065 520925 . - . ID=gene-PUW31_02405;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=PUW31_02405 CP118128.1 Protein Homology CDS 520065 520925 . - 0 ID=cds-WJH09161.1;Parent=gene-PUW31_02405;Dbxref=NCBI_GP:WJH09161.1;Name=WJH09161.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459460.1;locus_tag=PUW31_02405;product=acyl-CoA thioesterase II;protein_id=WJH09161.1;transl_table=11 CP118128.1 Genbank gene 521140 521709 . + . ID=gene-PUW31_02410;Name=PUW31_02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02410 CP118128.1 Protein Homology CDS 521140 521709 . + 0 ID=cds-WJH09162.1;Parent=gene-PUW31_02410;Dbxref=NCBI_GP:WJH09162.1;Name=WJH09162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459461.1;locus_tag=PUW31_02410;product=YbaY family lipoprotein;protein_id=WJH09162.1;transl_table=11 CP118128.1 Genbank gene 521742 522131 . - . ID=gene-PUW31_02415;Name=PUW31_02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02415 CP118128.1 Protein Homology CDS 521742 522131 . - 0 ID=cds-WJH09163.1;Parent=gene-PUW31_02415;Dbxref=NCBI_GP:WJH09163.1;Name=WJH09163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459462.1;locus_tag=PUW31_02415;product=MGMT family protein;protein_id=WJH09163.1;transl_table=11 CP118128.1 Genbank gene 522216 522312 . + . ID=gene-PUW31_02420;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=PUW31_02420 CP118128.1 cmsearch SRP_RNA 522216 522312 . + . ID=rna-PUW31_02420;Parent=gene-PUW31_02420;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_02420;product=signal recognition particle sRNA small type CP118128.1 cmsearch exon 522216 522312 . + . ID=exon-PUW31_02420-1;Parent=rna-PUW31_02420;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_02420;product=signal recognition particle sRNA small type CP118128.1 Genbank gene 522362 523912 . - . ID=gene-PUW31_02425;Name=PUW31_02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02425 CP118128.1 Protein Homology CDS 522362 523912 . - 0 ID=cds-WJH09164.1;Parent=gene-PUW31_02425;Dbxref=NCBI_GP:WJH09164.1;Name=WJH09164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459463.1;locus_tag=PUW31_02425;product=EAL domain-containing protein;protein_id=WJH09164.1;transl_table=11 CP118128.1 Genbank gene 524137 524397 . + . ID=gene-PUW31_02430;Name=PUW31_02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02430 CP118128.1 Protein Homology CDS 524137 524397 . + 0 ID=cds-WJH09165.1;Parent=gene-PUW31_02430;Dbxref=NCBI_GP:WJH09165.1;Name=WJH09165.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459464.1;locus_tag=PUW31_02430;product=type B 50S ribosomal protein L31;protein_id=WJH09165.1;transl_table=11 CP118128.1 Genbank pseudogene 524403 524542 . + . ID=gene-PUW31_02435;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=pseudogene;locus_tag=PUW31_02435;pseudo=true CP118128.1 Protein Homology CDS 524403 524542 . + 0 ID=cds-PUW31_02435;Parent=gene-PUW31_02435;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459465.1;locus_tag=PUW31_02435;product=type B 50S ribosomal protein L36;pseudo=true;transl_table=11 CP118128.1 Genbank gene 524598 525068 . - . ID=gene-PUW31_02440;Name=PUW31_02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02440 CP118128.1 Protein Homology CDS 524598 525068 . - 0 ID=cds-WJH09166.1;Parent=gene-PUW31_02440;Dbxref=NCBI_GP:WJH09166.1;Name=WJH09166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459466.1;locus_tag=PUW31_02440;product=YlaC family protein;protein_id=WJH09166.1;transl_table=11 CP118128.1 Genbank gene 525186 525737 . - . ID=gene-PUW31_02445;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=PUW31_02445 CP118128.1 Protein Homology CDS 525186 525737 . - 0 ID=cds-WJH09167.1;Parent=gene-PUW31_02445;Dbxref=NCBI_GP:WJH09167.1;Name=WJH09167.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459467.1;locus_tag=PUW31_02445;product=maltose O-acetyltransferase;protein_id=WJH09167.1;transl_table=11 CP118128.1 Genbank gene 525916 526134 . - . ID=gene-PUW31_02450;Name=PUW31_02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02450 CP118128.1 Protein Homology CDS 525916 526134 . - 0 ID=cds-WJH09168.1;Parent=gene-PUW31_02450;Dbxref=NCBI_GP:WJH09168.1;Name=WJH09168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459468.1;locus_tag=PUW31_02450;product=HHA domain-containing protein;protein_id=WJH09168.1;transl_table=11 CP118128.1 Genbank gene 526162 526536 . - . ID=gene-PUW31_02455;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=PUW31_02455 CP118128.1 Protein Homology CDS 526162 526536 . - 0 ID=cds-WJH09169.1;Parent=gene-PUW31_02455;Dbxref=NCBI_GP:WJH09169.1;Name=WJH09169.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=PUW31_02455;product=Hha toxicity modulator TomB;protein_id=WJH09169.1;transl_table=11 CP118128.1 Genbank gene 527032 530181 . - . ID=gene-PUW31_02460;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=PUW31_02460 CP118128.1 Protein Homology CDS 527032 530181 . - 0 ID=cds-WJH09170.1;Parent=gene-PUW31_02460;Dbxref=NCBI_GP:WJH09170.1;Name=WJH09170.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459470.1;locus_tag=PUW31_02460;product=efflux RND transporter permease AcrB;protein_id=WJH09170.1;transl_table=11 CP118128.1 Genbank gene 530204 531397 . - . ID=gene-PUW31_02465;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=PUW31_02465 CP118128.1 Protein Homology CDS 530204 531397 . - 0 ID=cds-WJH09171.1;Parent=gene-PUW31_02465;Dbxref=NCBI_GP:WJH09171.1;Name=WJH09171.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459471.1;locus_tag=PUW31_02465;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WJH09171.1;transl_table=11 CP118128.1 Genbank gene 531539 532192 . + . ID=gene-PUW31_02470;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=PUW31_02470 CP118128.1 Protein Homology CDS 531539 532192 . + 0 ID=cds-WJH09172.1;Parent=gene-PUW31_02470;Dbxref=NCBI_GP:WJH09172.1;Name=WJH09172.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459472.1;locus_tag=PUW31_02470;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WJH09172.1;transl_table=11 CP118128.1 Genbank gene 532311 535673 . + . ID=gene-PUW31_02475;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=PUW31_02475 CP118128.1 Protein Homology CDS 532311 535673 . + 0 ID=cds-WJH09173.1;Parent=gene-PUW31_02475;Dbxref=NCBI_GP:WJH09173.1;Name=WJH09173.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459473.1;locus_tag=PUW31_02475;product=mechanosensitive channel MscK;protein_id=WJH09173.1;transl_table=11 CP118128.1 Genbank gene 535715 536650 . - . ID=gene-PUW31_02480;Name=PUW31_02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02480 CP118128.1 Protein Homology CDS 535715 536650 . - 0 ID=cds-WJH09174.1;Parent=gene-PUW31_02480;Dbxref=NCBI_GP:WJH09174.1;Name=WJH09174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459474.1;locus_tag=PUW31_02480;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WJH09174.1;transl_table=11 CP118128.1 Genbank gene 536720 536887 . - . ID=gene-PUW31_02485;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=PUW31_02485 CP118128.1 Protein Homology CDS 536720 536887 . - 0 ID=cds-WJH09175.1;Parent=gene-PUW31_02485;Dbxref=NCBI_GP:WJH09175.1;Name=WJH09175.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459475.1;locus_tag=PUW31_02485;product=pleiotropic regulatory protein RsmS;protein_id=WJH09175.1;transl_table=11 CP118128.1 Genbank gene 536901 537428 . - . ID=gene-PUW31_02490;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=PUW31_02490 CP118128.1 Protein Homology CDS 536901 537428 . - 0 ID=cds-WJH09176.1;Parent=gene-PUW31_02490;Dbxref=NCBI_GP:WJH09176.1;Name=WJH09176.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001454692.1;locus_tag=PUW31_02490;product=primosomal replication protein N'';protein_id=WJH09176.1;transl_table=11 CP118128.1 Genbank gene 537497 537874 . + . ID=gene-PUW31_02495;Name=PUW31_02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02495 CP118128.1 Protein Homology CDS 537497 537874 . + 0 ID=cds-WJH09177.1;Parent=gene-PUW31_02495;Dbxref=NCBI_GP:WJH09177.1;Name=WJH09177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459477.1;locus_tag=PUW31_02495;product=DUF454 family protein;protein_id=WJH09177.1;transl_table=11 CP118128.1 Genbank gene 538027 538578 . + . ID=gene-PUW31_02500;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=PUW31_02500 CP118128.1 Protein Homology CDS 538027 538578 . + 0 ID=cds-WJH09178.1;Parent=gene-PUW31_02500;Dbxref=NCBI_GP:WJH09178.1;Name=WJH09178.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=PUW31_02500;product=adenine phosphoribosyltransferase;protein_id=WJH09178.1;transl_table=11 CP118128.1 Genbank gene 538692 540620 . + . ID=gene-PUW31_02505;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=PUW31_02505 CP118128.1 Protein Homology CDS 538692 540620 . + 0 ID=cds-WJH09179.1;Parent=gene-PUW31_02505;Dbxref=NCBI_GP:WJH09179.1;Name=WJH09179.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459479.1;locus_tag=PUW31_02505;product=DNA polymerase III subunit gamma/tau;protein_id=WJH09179.1;transl_table=11 CP118128.1 cmsearch sequence_feature 539953 540017 . + . ID=id-PUW31_02505;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_02505 CP118128.1 Genbank gene 540664 540993 . + . ID=gene-PUW31_02510;Name=PUW31_02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02510 CP118128.1 Protein Homology CDS 540664 540993 . + 0 ID=cds-WJH09180.1;Parent=gene-PUW31_02510;Dbxref=NCBI_GP:WJH09180.1;Name=WJH09180.1;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=PUW31_02510;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WJH09180.1;transl_table=11 CP118128.1 Genbank gene 540993 541598 . + . ID=gene-PUW31_02515;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=PUW31_02515 CP118128.1 Protein Homology CDS 540993 541598 . + 0 ID=cds-WJH09181.1;Parent=gene-PUW31_02515;Dbxref=NCBI_GP:WJH09181.1;Name=WJH09181.1;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459481.1;locus_tag=PUW31_02515;product=recombination mediator RecR;protein_id=WJH09181.1;transl_table=11 CP118128.1 Genbank gene 541709 543583 . + . ID=gene-PUW31_02520;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=PUW31_02520 CP118128.1 Protein Homology CDS 541709 543583 . + 0 ID=cds-WJH09182.1;Parent=gene-PUW31_02520;Dbxref=NCBI_GP:WJH09182.1;Name=WJH09182.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=PUW31_02520;product=molecular chaperone HtpG;protein_id=WJH09182.1;transl_table=11 CP118128.1 Genbank gene 543941 544585 . + . ID=gene-PUW31_02525;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=PUW31_02525 CP118128.1 Protein Homology CDS 543941 544585 . + 0 ID=cds-WJH09183.1;Parent=gene-PUW31_02525;Dbxref=NCBI_GP:WJH09183.1;Name=WJH09183.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=PUW31_02525;product=adenylate kinase;protein_id=WJH09183.1;transl_table=11 CP118128.1 Genbank gene 544814 545776 . + . ID=gene-PUW31_02530;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=PUW31_02530 CP118128.1 Protein Homology CDS 544814 545776 . + 0 ID=cds-WJH09184.1;Parent=gene-PUW31_02530;Dbxref=NCBI_GP:WJH09184.1;Name=WJH09184.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459484.1;locus_tag=PUW31_02530;product=ferrochelatase;protein_id=WJH09184.1;transl_table=11 CP118128.1 Genbank pseudogene 545773 546718 . - . ID=gene-PUW31_02535;Name=aes;gbkey=Gene;gene=aes;gene_biotype=pseudogene;locus_tag=PUW31_02535;pseudo=true CP118128.1 Protein Homology CDS 545773 546718 . - 0 ID=cds-PUW31_02535;Parent=gene-PUW31_02535;Note=frameshifted%3B internal stop;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459485.1;locus_tag=PUW31_02535;product=acetyl esterase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 546871 548175 . + . ID=gene-PUW31_02540;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=PUW31_02540 CP118128.1 Protein Homology CDS 546871 548175 . + 0 ID=cds-WJH09185.1;Parent=gene-PUW31_02540;Dbxref=NCBI_GP:WJH09185.1;Name=WJH09185.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459486.1;locus_tag=PUW31_02540;product=inosine/guanosine kinase;protein_id=WJH09185.1;transl_table=11 CP118128.1 Genbank gene 548224 549900 . - . ID=gene-PUW31_02545;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=PUW31_02545 CP118128.1 Protein Homology CDS 548224 549900 . - 0 ID=cds-WJH09186.1;Parent=gene-PUW31_02545;Dbxref=NCBI_GP:WJH09186.1;Name=WJH09186.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459487.1;locus_tag=PUW31_02545;product=YbaL family putative K(+) efflux transporter;protein_id=WJH09186.1;transl_table=11 CP118128.1 Genbank gene 550115 551335 . - . ID=gene-PUW31_02550;Name=PUW31_02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02550 CP118128.1 Protein Homology CDS 550115 551335 . - 0 ID=cds-WJH09187.1;Parent=gene-PUW31_02550;Dbxref=NCBI_GP:WJH09187.1;Name=WJH09187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459488.1;locus_tag=PUW31_02550;product=MFS transporter;protein_id=WJH09187.1;transl_table=11 CP118128.1 Genbank gene 551508 553160 . + . ID=gene-PUW31_02555;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=PUW31_02555 CP118128.1 Protein Homology CDS 551508 553160 . + 0 ID=cds-WJH09188.1;Parent=gene-PUW31_02555;Dbxref=NCBI_GP:WJH09188.1;Name=WJH09188.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459489.1;locus_tag=PUW31_02555;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WJH09188.1;transl_table=11 CP118128.1 Genbank gene 553277 553756 . - . ID=gene-PUW31_02560;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=PUW31_02560 CP118128.1 Protein Homology CDS 553277 553756 . - 0 ID=cds-WJH09189.1;Parent=gene-PUW31_02560;Dbxref=NCBI_GP:WJH09189.1;Name=WJH09189.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=PUW31_02560;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WJH09189.1;transl_table=11 CP118128.1 Genbank gene 553958 554752 . - . ID=gene-PUW31_02565;Name=PUW31_02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02565 CP118128.1 Protein Homology CDS 553958 554752 . - 0 ID=cds-WJH09190.1;Parent=gene-PUW31_02565;Dbxref=NCBI_GP:WJH09190.1;Name=WJH09190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459491.1;locus_tag=PUW31_02565;product=TraB/GumN family protein;protein_id=WJH09190.1;transl_table=11 CP118128.1 Genbank gene 554838 555665 . - . ID=gene-PUW31_02570;Name=PUW31_02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02570 CP118128.1 Protein Homology CDS 554838 555665 . - 0 ID=cds-WJH09191.1;Parent=gene-PUW31_02570;Dbxref=NCBI_GP:WJH09191.1;Name=WJH09191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459492.1;locus_tag=PUW31_02570;product=DUF1311 domain-containing protein;protein_id=WJH09191.1;transl_table=11 CP118128.1 Genbank gene 555819 558320 . - . ID=gene-PUW31_02575;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=PUW31_02575 CP118128.1 Protein Homology CDS 555819 558320 . - 0 ID=cds-WJH09192.1;Parent=gene-PUW31_02575;Dbxref=NCBI_GP:WJH09192.1;Name=WJH09192.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459493.1;locus_tag=PUW31_02575;product=copper-exporting P-type ATPase CopA;protein_id=WJH09192.1;transl_table=11 CP118128.1 Genbank gene 558430 558846 . + . ID=gene-PUW31_02580;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=PUW31_02580 CP118128.1 Protein Homology CDS 558430 558846 . + 0 ID=cds-WJH09193.1;Parent=gene-PUW31_02580;Dbxref=NCBI_GP:WJH09193.1;Name=WJH09193.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459494.1;locus_tag=PUW31_02580;product=Cu(I)-responsive transcriptional regulator;protein_id=WJH09193.1;transl_table=11 CP118128.1 Genbank gene 558847 559299 . - . ID=gene-PUW31_02585;Name=PUW31_02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02585 CP118128.1 Protein Homology CDS 558847 559299 . - 0 ID=cds-WJH09194.1;Parent=gene-PUW31_02585;Dbxref=NCBI_GP:WJH09194.1;Name=WJH09194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459495.1;locus_tag=PUW31_02585;product=NfeD family protein;protein_id=WJH09194.1;transl_table=11 CP118128.1 Genbank gene 559296 560213 . - . ID=gene-PUW31_02590;Name=PUW31_02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02590 CP118128.1 Protein Homology CDS 559296 560213 . - 0 ID=cds-WJH09195.1;Parent=gene-PUW31_02590;Dbxref=NCBI_GP:WJH09195.1;Name=WJH09195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459496.1;locus_tag=PUW31_02590;product=SPFH/Band 7/PHB domain protein;protein_id=WJH09195.1;transl_table=11 CP118128.1 Genbank gene 560361 561038 . + . ID=gene-PUW31_02595;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;locus_tag=PUW31_02595 CP118128.1 Protein Homology CDS 560361 561038 . + 0 ID=cds-WJH09196.1;Parent=gene-PUW31_02595;Dbxref=NCBI_GP:WJH09196.1;Name=WJH09196.1;gbkey=CDS;gene=fetA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459497.1;locus_tag=PUW31_02595;product=iron ABC transporter ATP-binding protein FetA;protein_id=WJH09196.1;transl_table=11 CP118128.1 Genbank gene 561025 561804 . + . ID=gene-PUW31_02600;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=PUW31_02600 CP118128.1 Protein Homology CDS 561025 561804 . + 0 ID=cds-WJH09197.1;Parent=gene-PUW31_02600;Dbxref=NCBI_GP:WJH09197.1;Name=WJH09197.1;gbkey=CDS;gene=fetB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459498.1;locus_tag=PUW31_02600;product=iron export ABC transporter permease subunit FetB;protein_id=WJH09197.1;transl_table=11 CP118128.1 Genbank pseudogene 561890 562744 . - . ID=gene-PUW31_02605;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=pseudogene;locus_tag=PUW31_02605;pseudo=true CP118128.1 Protein Homology CDS 561890 562744 . - 0 ID=cds-PUW31_02605;Parent=gene-PUW31_02605;Note=internal stop;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459499.1;locus_tag=PUW31_02605;product=chaperedoxin;pseudo=true;transl_table=11 CP118128.1 Genbank gene 562804 563574 . - . ID=gene-PUW31_02610;Name=PUW31_02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02610 CP118128.1 Protein Homology CDS 562804 563574 . - 0 ID=cds-WJH09198.1;Parent=gene-PUW31_02610;Dbxref=NCBI_GP:WJH09198.1;Name=WJH09198.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459500.1;locus_tag=PUW31_02610;product=SDR family oxidoreductase;protein_id=WJH09198.1;transl_table=11 CP118128.1 Genbank gene 563729 564343 . - . ID=gene-PUW31_02615;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=PUW31_02615 CP118128.1 Protein Homology CDS 563729 564343 . - 0 ID=cds-WJH09199.1;Parent=gene-PUW31_02615;Dbxref=NCBI_GP:WJH09199.1;Name=WJH09199.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459501.1;locus_tag=PUW31_02615;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WJH09199.1;transl_table=11 CP118128.1 Genbank gene 564314 565000 . + . ID=gene-PUW31_02620;Name=PUW31_02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02620 CP118128.1 Protein Homology CDS 564314 565000 . + 0 ID=cds-WJH09200.1;Parent=gene-PUW31_02620;Dbxref=NCBI_GP:WJH09200.1;Name=WJH09200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459502.1;locus_tag=PUW31_02620;product=ABC transporter ATP-binding protein;protein_id=WJH09200.1;transl_table=11 CP118128.1 Genbank pseudogene 564997 567411 . + . ID=gene-PUW31_02625;Name=PUW31_02625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_02625;pseudo=true CP118128.1 Protein Homology CDS 564997 567411 . + 0 ID=cds-PUW31_02625;Parent=gene-PUW31_02625;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459503.1;locus_tag=PUW31_02625;product=ABC transporter permease;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 567597 568730 . + . ID=gene-PUW31_02630;Name=PUW31_02630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_02630;pseudo=true CP118128.1 Protein Homology CDS 567597 568730 . + 0 ID=cds-PUW31_02630;Parent=gene-PUW31_02630;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459504.1;locus_tag=PUW31_02630;product=porin;pseudo=true;transl_table=11 CP118128.1 Genbank gene 568987 569817 . + . ID=gene-PUW31_02635;Name=PUW31_02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02635 CP118128.1 Protein Homology CDS 568987 569817 . + 0 ID=cds-WJH09201.1;Parent=gene-PUW31_02635;Dbxref=NCBI_GP:WJH09201.1;Name=WJH09201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459505.1;locus_tag=PUW31_02635;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WJH09201.1;transl_table=11 CP118128.1 Genbank gene 569854 570870 . + . ID=gene-PUW31_02640;Name=sfbB;gbkey=Gene;gene=sfbB;gene_biotype=protein_coding;locus_tag=PUW31_02640 CP118128.1 Protein Homology CDS 569854 570870 . + 0 ID=cds-WJH09202.1;Parent=gene-PUW31_02640;Dbxref=NCBI_GP:WJH09202.1;Name=WJH09202.1;gbkey=CDS;gene=sfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459506.1;locus_tag=PUW31_02640;product=virulence-associated ABC transporter ATP-binding protein SfbB;protein_id=WJH09202.1;transl_table=11 CP118128.1 Genbank gene 570863 571522 . + . ID=gene-PUW31_02645;Name=PUW31_02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02645 CP118128.1 Protein Homology CDS 570863 571522 . + 0 ID=cds-WJH09203.1;Parent=gene-PUW31_02645;Dbxref=NCBI_GP:WJH09203.1;Name=WJH09203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459507.1;locus_tag=PUW31_02645;product=ABC transporter permease;protein_id=WJH09203.1;transl_table=11 CP118128.1 Genbank gene 571561 572655 . - . ID=gene-PUW31_02650;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=PUW31_02650 CP118128.1 Protein Homology CDS 571561 572655 . - 0 ID=cds-WJH09204.1;Parent=gene-PUW31_02650;Dbxref=NCBI_GP:WJH09204.1;Name=WJH09204.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459508.1;locus_tag=PUW31_02650;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WJH09204.1;transl_table=11 CP118128.1 Genbank pseudogene 572725 573650 . - . ID=gene-PUW31_02655;Name=allS;gbkey=Gene;gene=allS;gene_biotype=pseudogene;locus_tag=PUW31_02655;pseudo=true CP118128.1 Protein Homology CDS 572725 573650 . - 0 ID=cds-PUW31_02655;Parent=gene-PUW31_02655;Note=frameshifted;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459509.1;locus_tag=PUW31_02655;product=HTH-type transcriptional activator AllS;pseudo=true;transl_table=11 CP118128.1 Genbank gene 573877 574359 . + . ID=gene-PUW31_02660;Name=allA;gbkey=Gene;gene=allA;gene_biotype=protein_coding;locus_tag=PUW31_02660 CP118128.1 Protein Homology CDS 573877 574359 . + 0 ID=cds-WJH09205.1;Parent=gene-PUW31_02660;Dbxref=NCBI_GP:WJH09205.1;Name=WJH09205.1;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000764660.1;locus_tag=PUW31_02660;product=ureidoglycolate lyase;protein_id=WJH09205.1;transl_table=11 CP118128.1 Genbank gene 574438 575256 . + . ID=gene-PUW31_02665;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=PUW31_02665 CP118128.1 Protein Homology CDS 574438 575256 . + 0 ID=cds-WJH09206.1;Parent=gene-PUW31_02665;Dbxref=NCBI_GP:WJH09206.1;Name=WJH09206.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459511.1;locus_tag=PUW31_02665;product=HTH-type transcriptional repressor AllR;protein_id=WJH09206.1;transl_table=11 CP118128.1 Genbank gene 575341 577122 . + . ID=gene-PUW31_02670;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=PUW31_02670 CP118128.1 Protein Homology CDS 575341 577122 . + 0 ID=cds-WJH09207.1;Parent=gene-PUW31_02670;Dbxref=NCBI_GP:WJH09207.1;Name=WJH09207.1;Ontology_term=GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459512.1;locus_tag=PUW31_02670;product=glyoxylate carboligase;protein_id=WJH09207.1;transl_table=11 CP118128.1 Genbank gene 577135 577911 . + . ID=gene-PUW31_02675;Name=hyi;gbkey=Gene;gene=hyi;gene_biotype=protein_coding;locus_tag=PUW31_02675 CP118128.1 Protein Homology CDS 577135 577911 . + 0 ID=cds-WJH09208.1;Parent=gene-PUW31_02675;Dbxref=NCBI_GP:WJH09208.1;Name=WJH09208.1;gbkey=CDS;gene=hyi;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459513.1;locus_tag=PUW31_02675;product=hydroxypyruvate isomerase;protein_id=WJH09208.1;transl_table=11 CP118128.1 Genbank gene 578011 578889 . + . ID=gene-PUW31_02680;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=PUW31_02680 CP118128.1 Protein Homology CDS 578011 578889 . + 0 ID=cds-WJH09209.1;Parent=gene-PUW31_02680;Dbxref=NCBI_GP:WJH09209.1;Name=WJH09209.1;Ontology_term=GO:0046487,GO:0008679,GO:0051287;gbkey=CDS;gene=glxR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA,NAD binding|0051287||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459514.1;locus_tag=PUW31_02680;product=2-hydroxy-3-oxopropionate reductase;protein_id=WJH09209.1;transl_table=11 CP118128.1 Genbank gene 578955 580202 . + . ID=gene-PUW31_02685;Name=PUW31_02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02685 CP118128.1 Protein Homology CDS 578955 580202 . + 0 ID=cds-WJH09210.1;Parent=gene-PUW31_02685;Dbxref=NCBI_GP:WJH09210.1;Name=WJH09210.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459515.1;locus_tag=PUW31_02685;product=MFS transporter;protein_id=WJH09210.1;transl_table=11 CP118128.1 Genbank gene 580298 581752 . + . ID=gene-PUW31_02690;Name=PUW31_02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02690 CP118128.1 Protein Homology CDS 580298 581752 . + 0 ID=cds-WJH09211.1;Parent=gene-PUW31_02690;Dbxref=NCBI_GP:WJH09211.1;Name=WJH09211.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=PUW31_02690;product=putative allantoin permease;protein_id=WJH09211.1;transl_table=11 CP118128.1 Genbank gene 581831 583192 . + . ID=gene-PUW31_02695;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=PUW31_02695 CP118128.1 Protein Homology CDS 581831 583192 . + 0 ID=cds-WJH09212.1;Parent=gene-PUW31_02695;Dbxref=NCBI_GP:WJH09212.1;Name=WJH09212.1;Ontology_term=GO:0000256,GO:0004038;gbkey=CDS;gene=allB;go_function=allantoinase activity|0004038||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459518.1;locus_tag=PUW31_02695;product=allantoinase AllB;protein_id=WJH09212.1;transl_table=11 CP118128.1 Genbank gene 583251 584549 . + . ID=gene-PUW31_02700;Name=PUW31_02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02700 CP118128.1 Protein Homology CDS 583251 584549 . + 0 ID=cds-WJH09213.1;Parent=gene-PUW31_02700;Dbxref=NCBI_GP:WJH09213.1;Name=WJH09213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459519.1;locus_tag=PUW31_02700;product=uracil/xanthine transporter;protein_id=WJH09213.1;transl_table=11 CP118128.1 Genbank gene 584572 585720 . + . ID=gene-PUW31_02705;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=PUW31_02705 CP118128.1 Protein Homology CDS 584572 585720 . + 0 ID=cds-WJH10646.1;Parent=gene-PUW31_02705;Dbxref=NCBI_GP:WJH10646.1;Name=WJH10646.1;gbkey=CDS;gene=glxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459520.1;locus_tag=PUW31_02705;product=glycerate 3-kinase;protein_id=WJH10646.1;transl_table=11 CP118128.1 Genbank pseudogene 585800 586584 . - . ID=gene-PUW31_02710;Name=allE;gbkey=Gene;gene=allE;gene_biotype=pseudogene;locus_tag=PUW31_02710;pseudo=true CP118128.1 Protein Homology CDS 585800 586584 . - 0 ID=cds-PUW31_02710;Parent=gene-PUW31_02710;Note=frameshifted;Ontology_term=GO:0010136,GO:0071522;gbkey=CDS;gene=allE;go_function=ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459521.1;locus_tag=PUW31_02710;product=(S)-ureidoglycine aminohydrolase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 586595 587830 . - . ID=gene-PUW31_02715;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=PUW31_02715 CP118128.1 Protein Homology CDS 586595 587830 . - 0 ID=cds-WJH09214.1;Parent=gene-PUW31_02715;Dbxref=NCBI_GP:WJH09214.1;Name=WJH09214.1;Ontology_term=GO:0000256,GO:0009442,GO:0047652;gbkey=CDS;gene=allC;go_function=allantoate deiminase activity|0047652||IEA;go_process=allantoin catabolic process|0000256||IEA,allantoin assimilation pathway|0009442||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459522.1;locus_tag=PUW31_02715;product=allantoate deiminase;protein_id=WJH09214.1;transl_table=11 CP118128.1 Genbank pseudogene 587852 588900 . - . ID=gene-PUW31_02720;Name=allD;gbkey=Gene;gene=allD;gene_biotype=pseudogene;locus_tag=PUW31_02720;pseudo=true CP118128.1 Protein Homology CDS 587852 588900 . - 0 ID=cds-PUW31_02720;Parent=gene-PUW31_02720;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;gene=allD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459523.1;locus_tag=PUW31_02720;product=ureidoglycolate dehydrogenase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 589216 590880 . + . ID=gene-PUW31_02725;Name=PUW31_02725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_02725;pseudo=true CP118128.1 Protein Homology CDS 589216 590880 . + 0 ID=cds-PUW31_02725;Parent=gene-PUW31_02725;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459524.1;locus_tag=PUW31_02725;product=acyl-CoA synthetase FdrA;pseudo=true;transl_table=11 CP118128.1 Genbank gene 590890 592149 . + . ID=gene-PUW31_02730;Name=PUW31_02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02730 CP118128.1 Protein Homology CDS 590890 592149 . + 0 ID=cds-WJH09215.1;Parent=gene-PUW31_02730;Dbxref=NCBI_GP:WJH09215.1;Name=WJH09215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459525.1;locus_tag=PUW31_02730;product=DUF1116 domain-containing protein;protein_id=WJH09215.1;transl_table=11 CP118128.1 Genbank pseudogene 592161 592969 . + . ID=gene-PUW31_02735;Name=PUW31_02735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_02735;pseudo=true CP118128.1 Protein Homology CDS 592161 592969 . + 0 ID=cds-PUW31_02735;Parent=gene-PUW31_02735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459526.1;locus_tag=PUW31_02735;product=DUF2877 domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 592973 593866 . + . ID=gene-PUW31_02740;Name=PUW31_02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02740 CP118128.1 Protein Homology CDS 592973 593866 . + 0 ID=cds-WJH09216.1;Parent=gene-PUW31_02740;Dbxref=NCBI_GP:WJH09216.1;Name=WJH09216.1;Ontology_term=GO:0006525,GO:0008804;gbkey=CDS;go_function=carbamate kinase activity|0008804||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459527.1;locus_tag=PUW31_02740;product=carbamate kinase;protein_id=WJH09216.1;transl_table=11 CP118128.1 Genbank gene 593907 594974 . - . ID=gene-PUW31_02745;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=PUW31_02745 CP118128.1 Protein Homology CDS 593907 594974 . - 0 ID=cds-WJH09217.1;Parent=gene-PUW31_02745;Dbxref=NCBI_GP:WJH09217.1;Name=WJH09217.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459528.1;locus_tag=PUW31_02745;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WJH09217.1;transl_table=11 CP118128.1 Genbank gene 594971 595480 . - . ID=gene-PUW31_02750;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=PUW31_02750 CP118128.1 Protein Homology CDS 594971 595480 . - 0 ID=cds-WJH09218.1;Parent=gene-PUW31_02750;Dbxref=NCBI_GP:WJH09218.1;Name=WJH09218.1;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459529.1;locus_tag=PUW31_02750;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WJH09218.1;transl_table=11 CP118128.1 Genbank gene 595598 596320 . - . ID=gene-PUW31_02755;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=PUW31_02755 CP118128.1 Protein Homology CDS 595598 596320 . - 0 ID=cds-WJH09219.1;Parent=gene-PUW31_02755;Dbxref=NCBI_GP:WJH09219.1;Name=WJH09219.1;Ontology_term=GO:0009245,GO:0008758;gbkey=CDS;gene=lpxH;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459530.1;locus_tag=PUW31_02755;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WJH09219.1;transl_table=11 CP118128.1 Genbank gene 596323 596817 . - . ID=gene-PUW31_02760;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=PUW31_02760 CP118128.1 Protein Homology CDS 596323 596817 . - 0 ID=cds-WJH09220.1;Parent=gene-PUW31_02760;Dbxref=NCBI_GP:WJH09220.1;Name=WJH09220.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=PUW31_02760;product=peptidylprolyl isomerase B;protein_id=WJH09220.1;transl_table=11 CP118128.1 Genbank gene 596990 598375 . + . ID=gene-PUW31_02765;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=PUW31_02765 CP118128.1 Protein Homology CDS 596990 598375 . + 0 ID=cds-WJH09221.1;Parent=gene-PUW31_02765;Dbxref=NCBI_GP:WJH09221.1;Name=WJH09221.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=PUW31_02765;product=cysteine--tRNA ligase;protein_id=WJH09221.1;transl_table=11 CP118128.1 Genbank gene 598419 599243 . - . ID=gene-PUW31_02770;Name=PUW31_02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02770 CP118128.1 Protein Homology CDS 598419 599243 . - 0 ID=cds-WJH09222.1;Parent=gene-PUW31_02770;Dbxref=NCBI_GP:WJH09222.1;Name=WJH09222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459533.1;locus_tag=PUW31_02770;product=DUF2145 domain-containing protein;protein_id=WJH09222.1;transl_table=11 CP118128.1 Genbank gene 599240 599677 . - . ID=gene-PUW31_02775;Name=PUW31_02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02775 CP118128.1 Protein Homology CDS 599240 599677 . - 0 ID=cds-WJH09223.1;Parent=gene-PUW31_02775;Dbxref=NCBI_GP:WJH09223.1;Name=WJH09223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459534.1;locus_tag=PUW31_02775;product=STM0539 family protein;protein_id=WJH09223.1;transl_table=11 CP118128.1 Genbank gene 599670 600215 . - . ID=gene-PUW31_02780;Name=PUW31_02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02780 CP118128.1 Protein Homology CDS 599670 600215 . - 0 ID=cds-WJH09224.1;Parent=gene-PUW31_02780;Dbxref=NCBI_GP:WJH09224.1;Name=WJH09224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459535.1;locus_tag=PUW31_02780;product=metal-dependent hydrolase;protein_id=WJH09224.1;transl_table=11 CP118128.1 Genbank gene 600299 600511 . - . ID=gene-PUW31_02785;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=PUW31_02785 CP118128.1 Protein Homology CDS 600299 600511 . - 0 ID=cds-WJH09225.1;Parent=gene-PUW31_02785;Dbxref=NCBI_GP:WJH09225.1;Name=WJH09225.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459536.1;locus_tag=PUW31_02785;product=ribosome-associated protein YbcJ;protein_id=WJH09225.1;transl_table=11 CP118128.1 Genbank gene 600513 601379 . - . ID=gene-PUW31_02790;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=PUW31_02790 CP118128.1 Protein Homology CDS 600513 601379 . - 0 ID=cds-WJH09226.1;Parent=gene-PUW31_02790;Dbxref=NCBI_GP:WJH09226.1;Name=WJH09226.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459537.1;locus_tag=PUW31_02790;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WJH09226.1;transl_table=11 CP118128.1 Genbank gene 601925 602482 . + . ID=gene-PUW31_02795;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=PUW31_02795 CP118128.1 Protein Homology CDS 601925 602482 . + 0 ID=cds-WJH09227.1;Parent=gene-PUW31_02795;Dbxref=NCBI_GP:WJH09227.1;Name=WJH09227.1;gbkey=CDS;gene=fimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459538.3;locus_tag=PUW31_02795;product=type 1 fimbrial protein subunit FimA;protein_id=WJH09227.1;transl_table=11 CP118128.1 Genbank gene 602556 603089 . + . ID=gene-PUW31_02800;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=PUW31_02800 CP118128.1 Protein Homology CDS 602556 603089 . + 0 ID=cds-WJH09228.1;Parent=gene-PUW31_02800;Dbxref=NCBI_GP:WJH09228.1;Name=WJH09228.1;gbkey=CDS;gene=fimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459539.1;locus_tag=PUW31_02800;product=type 1 fimbrial protein subunit FimI;protein_id=WJH09228.1;transl_table=11 CP118128.1 Genbank gene 603133 603825 . + . ID=gene-PUW31_02805;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=PUW31_02805 CP118128.1 Protein Homology CDS 603133 603825 . + 0 ID=cds-WJH09229.1;Parent=gene-PUW31_02805;Dbxref=NCBI_GP:WJH09229.1;Name=WJH09229.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459540.1;locus_tag=PUW31_02805;product=type 1 fimbria chaperone FimC;protein_id=WJH09229.1;transl_table=11 CP118128.1 Genbank pseudogene 603856 606466 . + . ID=gene-PUW31_02810;Name=PUW31_02810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_02810;pseudo=true CP118128.1 Protein Homology CDS 603856 606466 . + 0 ID=cds-PUW31_02810;Parent=gene-PUW31_02810;Note=frameshifted;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459541.1;locus_tag=PUW31_02810;product=fimbrial biogenesis usher protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 606481 607488 . + . ID=gene-PUW31_02815;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=PUW31_02815 CP118128.1 Protein Homology CDS 606481 607488 . + 0 ID=cds-WJH09230.1;Parent=gene-PUW31_02815;Dbxref=NCBI_GP:WJH09230.1;Name=WJH09230.1;Ontology_term=GO:0007155;gbkey=CDS;gene=fimH;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459542.1;locus_tag=PUW31_02815;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WJH09230.1;transl_table=11 CP118128.1 Genbank gene 607498 608016 . + . ID=gene-PUW31_02820;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=PUW31_02820 CP118128.1 Protein Homology CDS 607498 608016 . + 0 ID=cds-WJH09231.1;Parent=gene-PUW31_02820;Dbxref=NCBI_GP:WJH09231.1;Name=WJH09231.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459543.1;locus_tag=PUW31_02820;product=fimbria assembly protein;protein_id=WJH09231.1;transl_table=11 CP118128.1 Genbank gene 608062 608694 . - . ID=gene-PUW31_02825;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=PUW31_02825 CP118128.1 Protein Homology CDS 608062 608694 . - 0 ID=cds-WJH09232.1;Parent=gene-PUW31_02825;Dbxref=NCBI_GP:WJH09232.1;Name=WJH09232.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459544.1;locus_tag=PUW31_02825;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WJH09232.1;transl_table=11 CP118128.1 Genbank pseudogene 609298 610016 . - . ID=gene-PUW31_02830;Name=fimY;gbkey=Gene;gene=fimY;gene_biotype=pseudogene;locus_tag=PUW31_02830;pseudo=true CP118128.1 Protein Homology CDS 609298 610016 . - 0 ID=cds-PUW31_02830;Parent=gene-PUW31_02830;Note=frameshifted;gbkey=CDS;gene=fimY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459545.1;locus_tag=PUW31_02830;product=fimbria biosynthesis regulator FimY;pseudo=true;transl_table=11 CP118128.1 Genbank gene 610035 610346 . - . ID=gene-PUW31_02835;Name=PUW31_02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02835 CP118128.1 Protein Homology CDS 610035 610346 . - 0 ID=cds-WJH09233.1;Parent=gene-PUW31_02835;Dbxref=NCBI_GP:WJH09233.1;Name=WJH09233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459546.1;locus_tag=PUW31_02835;product=diguanylate cyclase;protein_id=WJH09233.1;transl_table=11 CP118128.1 Genbank gene 610508 611104 . - . ID=gene-PUW31_02840;Name=fimW;gbkey=Gene;gene=fimW;gene_biotype=protein_coding;locus_tag=PUW31_02840 CP118128.1 Protein Homology CDS 610508 611104 . - 0 ID=cds-WJH09234.1;Parent=gene-PUW31_02840;Dbxref=NCBI_GP:WJH09234.1;Name=WJH09234.1;gbkey=CDS;gene=fimW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459547.1;locus_tag=PUW31_02840;product=fimbria biosynthesis transcriptional regulator FimW;protein_id=WJH09234.1;transl_table=11 CP118128.1 Genbank gene 611359 611435 . + . ID=gene-PUW31_02845;Name=PUW31_02845;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_02845 CP118128.1 tRNAscan-SE tRNA 611359 611435 . + . ID=rna-PUW31_02845;Parent=gene-PUW31_02845;anticodon=(pos:611393..611395);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_02845;product=tRNA-Arg CP118128.1 tRNAscan-SE exon 611359 611435 . + . ID=exon-PUW31_02845-1;Parent=rna-PUW31_02845;anticodon=(pos:611393..611395);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_02845;product=tRNA-Arg CP118128.1 Genbank pseudogene 611462 611560 . - . ID=gene-PUW31_02850;Name=PUW31_02850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_02850;pseudo=true CP118128.1 Protein Homology CDS 611462 611560 . - 0 ID=cds-PUW31_02850;Parent=gene-PUW31_02850;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012599930.1;locus_tag=PUW31_02850;product=hypothetical protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 611529 611922 . - . ID=gene-PUW31_02855;Name=PUW31_02855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_02855;pseudo=true CP118128.1 Protein Homology CDS 611529 611922 . - 0 ID=cds-PUW31_02855;Parent=gene-PUW31_02855;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612139.1;locus_tag=PUW31_02855;product=IS3 family transposase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 611943 612196 . - . ID=gene-PUW31_02860;Name=PUW31_02860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_02860;pseudo=true CP118128.1 Protein Homology CDS 611943 612196 . - 0 ID=cds-PUW31_02860;Parent=gene-PUW31_02860;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611921.1;locus_tag=PUW31_02860;product=transposase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 612583 614234 . - . ID=gene-PUW31_02865;Name=PUW31_02865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_02865;pseudo=true CP118128.1 Protein Homology CDS 612583 614234 . - 0 ID=cds-PUW31_02865;Parent=gene-PUW31_02865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459550.1;locus_tag=PUW31_02865;product=DUF6056 family protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 614215 615141 . - . ID=gene-PUW31_02870;Name=PUW31_02870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_02870;pseudo=true CP118128.1 Protein Homology CDS 614215 615141 . - 0 ID=cds-PUW31_02870;Parent=gene-PUW31_02870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459551.1;locus_tag=PUW31_02870;product=glycosyltransferase family 2 protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 615138 615500 . - . ID=gene-PUW31_02875;Name=PUW31_02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02875 CP118128.1 Protein Homology CDS 615138 615500 . - 0 ID=cds-WJH09235.1;Parent=gene-PUW31_02875;Dbxref=NCBI_GP:WJH09235.1;Name=WJH09235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459552.1;locus_tag=PUW31_02875;product=GtrA family protein;protein_id=WJH09235.1;transl_table=11 CP118128.1 Genbank gene 615923 616132 . - . ID=gene-PUW31_02880;Name=PUW31_02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02880 CP118128.1 GeneMarkS-2+ CDS 615923 616132 . - 0 ID=cds-WJH09236.1;Parent=gene-PUW31_02880;Dbxref=NCBI_GP:WJH09236.1;Name=WJH09236.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_02880;product=hypothetical protein;protein_id=WJH09236.1;transl_table=11 CP118128.1 Genbank pseudogene 616367 616741 . - . ID=gene-PUW31_02885;Name=PUW31_02885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_02885;pseudo=true CP118128.1 Protein Homology CDS 616367 616741 . - 0 ID=cds-PUW31_02885;Parent=gene-PUW31_02885;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000635961.1;locus_tag=PUW31_02885;product=ATP-binding protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 616751 616984 . + . ID=gene-PUW31_02890;Name=PUW31_02890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_02890;pseudo=true CP118128.1 Protein Homology CDS 616751 616984 . + 0 ID=cds-PUW31_02890;Parent=gene-PUW31_02890;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436621.1;locus_tag=PUW31_02890;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11 CP118128.1 Genbank gene 617035 617889 . - . ID=gene-PUW31_02895;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=PUW31_02895 CP118128.1 Protein Homology CDS 617035 617889 . - 0 ID=cds-WJH09237.1;Parent=gene-PUW31_02895;Dbxref=NCBI_GP:WJH09237.1;Name=WJH09237.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459555.1;locus_tag=PUW31_02895;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=WJH09237.1;transl_table=11 CP118128.1 Genbank gene 618105 619430 . + . ID=gene-PUW31_02900;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=PUW31_02900 CP118128.1 Protein Homology CDS 618105 619430 . + 0 ID=cds-WJH09238.1;Parent=gene-PUW31_02900;Dbxref=NCBI_GP:WJH09238.1;Name=WJH09238.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459556.1;locus_tag=PUW31_02900;product=reactive chlorine resistance oxidoreductase RclA;protein_id=WJH09238.1;transl_table=11 CP118128.1 Genbank gene 619587 619823 . + . ID=gene-PUW31_02905;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=PUW31_02905 CP118128.1 Protein Homology CDS 619587 619823 . + 0 ID=cds-WJH09239.1;Parent=gene-PUW31_02905;Dbxref=NCBI_GP:WJH09239.1;Name=WJH09239.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459557.1;locus_tag=PUW31_02905;product=reactive chlorine resistance periplasmic protein RclB;protein_id=WJH09239.1;transl_table=11 CP118128.1 Genbank gene 619836 620396 . + . ID=gene-PUW31_02910;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=PUW31_02910 CP118128.1 Protein Homology CDS 619836 620396 . + 0 ID=cds-WJH09240.1;Parent=gene-PUW31_02910;Dbxref=NCBI_GP:WJH09240.1;Name=WJH09240.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459558.1;locus_tag=PUW31_02910;product=reactive chlorine resistance membrane protein RclC;protein_id=WJH09240.1;transl_table=11 CP118128.1 Genbank gene 620563 621738 . - . ID=gene-PUW31_02915;Name=PUW31_02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02915 CP118128.1 Protein Homology CDS 620563 621738 . - 0 ID=cds-WJH09241.1;Parent=gene-PUW31_02915;Dbxref=NCBI_GP:WJH09241.1;Name=WJH09241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459559.1;locus_tag=PUW31_02915;product=DnaJ family molecular chaperone;protein_id=WJH09241.1;transl_table=11 CP118128.1 Genbank gene 622064 623458 . + . ID=gene-PUW31_02920;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=PUW31_02920 CP118128.1 Protein Homology CDS 622064 623458 . + 0 ID=cds-WJH09242.1;Parent=gene-PUW31_02920;Dbxref=NCBI_GP:WJH09242.1;Name=WJH09242.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459560.1;locus_tag=PUW31_02920;product=phenylalanine transporter;protein_id=WJH09242.1;transl_table=11 CP118128.1 Genbank gene 623500 624747 . - . ID=gene-PUW31_02925;Name=PUW31_02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02925 CP118128.1 Protein Homology CDS 623500 624747 . - 0 ID=cds-WJH09243.1;Parent=gene-PUW31_02925;Dbxref=NCBI_GP:WJH09243.1;Name=WJH09243.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459561.1;locus_tag=PUW31_02925;product=mechanosensitive ion channel;protein_id=WJH09243.1;transl_table=11 CP118128.1 Genbank gene 625058 627028 . + . ID=gene-PUW31_02930;Name=PUW31_02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02930 CP118128.1 Protein Homology CDS 625058 627028 . + 0 ID=cds-WJH09244.1;Parent=gene-PUW31_02930;Dbxref=NCBI_GP:WJH09244.1;Name=WJH09244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459562.1;locus_tag=PUW31_02930;product=autotransporter domain-containing protein;protein_id=WJH09244.1;transl_table=11 CP118128.1 Genbank gene 627295 627948 . - . ID=gene-PUW31_02935;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=PUW31_02935 CP118128.1 Protein Homology CDS 627295 627948 . - 0 ID=cds-WJH09245.1;Parent=gene-PUW31_02935;Dbxref=NCBI_GP:WJH09245.1;Name=WJH09245.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459570.1;locus_tag=PUW31_02935;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WJH09245.1;transl_table=11 CP118128.1 Genbank gene 628045 628413 . - . ID=gene-PUW31_02940;Name=PUW31_02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02940 CP118128.1 Protein Homology CDS 628045 628413 . - 0 ID=cds-WJH09246.1;Parent=gene-PUW31_02940;Dbxref=NCBI_GP:WJH09246.1;Name=WJH09246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459571.1;locus_tag=PUW31_02940;product=MmcQ/YjbR family DNA-binding protein;protein_id=WJH09246.1;transl_table=11 CP118128.1 Genbank gene 628413 628994 . - . ID=gene-PUW31_02945;Name=PUW31_02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02945 CP118128.1 Protein Homology CDS 628413 628994 . - 0 ID=cds-WJH09247.1;Parent=gene-PUW31_02945;Dbxref=NCBI_GP:WJH09247.1;Name=WJH09247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459572.1;locus_tag=PUW31_02945;product=TetR/AcrR family transcriptional regulator;protein_id=WJH09247.1;transl_table=11 CP118128.1 Genbank gene 629283 629624 . + . ID=gene-PUW31_02950;Name=PUW31_02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02950 CP118128.1 Protein Homology CDS 629283 629624 . + 0 ID=cds-WJH09248.1;Parent=gene-PUW31_02950;Dbxref=NCBI_GP:WJH09248.1;Name=WJH09248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459573.1;locus_tag=PUW31_02950;product=RamA family antibiotic efflux transcriptional regulator;protein_id=WJH09248.1;transl_table=11 CP118128.1 Genbank gene 629630 629878 . - . ID=gene-PUW31_02955;Name=PUW31_02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02955 CP118128.1 Protein Homology CDS 629630 629878 . - 0 ID=cds-WJH09249.1;Parent=gene-PUW31_02955;Dbxref=NCBI_GP:WJH09249.1;Name=WJH09249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459574.1;locus_tag=PUW31_02955;product=DUF1158 family protein;protein_id=WJH09249.1;transl_table=11 CP118128.1 Genbank gene 629945 631063 . - . ID=gene-PUW31_02960;Name=PUW31_02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02960 CP118128.1 Protein Homology CDS 629945 631063 . - 0 ID=cds-WJH09250.1;Parent=gene-PUW31_02960;Dbxref=NCBI_GP:WJH09250.1;Name=WJH09250.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=cellular modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459575.1;locus_tag=PUW31_02960;product=YbdK family carboxylate-amine ligase;protein_id=WJH09250.1;transl_table=11 CP118128.1 Genbank gene 631075 631779 . - . ID=gene-PUW31_02965;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=PUW31_02965 CP118128.1 Protein Homology CDS 631075 631779 . - 0 ID=cds-WJH09251.1;Parent=gene-PUW31_02965;Dbxref=NCBI_GP:WJH09251.1;Name=WJH09251.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459576.1;locus_tag=PUW31_02965;product=enterobactin synthase subunit EntD;protein_id=WJH09251.1;transl_table=11 CP118128.1 Genbank pseudogene 631825 634079 . - . ID=gene-PUW31_02970;Name=PUW31_02970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_02970;pseudo=true CP118128.1 Protein Homology CDS 631825 634079 . - 0 ID=cds-PUW31_02970;Parent=gene-PUW31_02970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459577.1;locus_tag=PUW31_02970;product=TonB-dependent siderophore receptor;pseudo=true;transl_table=11 CP118128.1 Genbank gene 634267 635481 . + . ID=gene-PUW31_02975;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=PUW31_02975 CP118128.1 Protein Homology CDS 634267 635481 . + 0 ID=cds-WJH09252.1;Parent=gene-PUW31_02975;Dbxref=NCBI_GP:WJH09252.1;Name=WJH09252.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459578.1;locus_tag=PUW31_02975;product=enterochelin esterase;protein_id=WJH09252.1;transl_table=11 CP118128.1 Genbank gene 635512 635730 . + . ID=gene-PUW31_02980;Name=PUW31_02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_02980 CP118128.1 Protein Homology CDS 635512 635730 . + 0 ID=cds-WJH09253.1;Parent=gene-PUW31_02980;Dbxref=NCBI_GP:WJH09253.1;Name=WJH09253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459579.1;locus_tag=PUW31_02980;product=MbtH family protein;protein_id=WJH09253.1;transl_table=11 CP118128.1 Genbank gene 635727 639611 . + . ID=gene-PUW31_02985;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=PUW31_02985 CP118128.1 Protein Homology CDS 635727 639611 . + 0 ID=cds-WJH09254.1;Parent=gene-PUW31_02985;Dbxref=NCBI_GP:WJH09254.1;Name=WJH09254.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=PUW31_02985;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WJH09254.1;transl_table=11 CP118128.1 Genbank gene 639861 640997 . + . ID=gene-PUW31_02990;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=PUW31_02990 CP118128.1 Protein Homology CDS 639861 640997 . + 0 ID=cds-WJH09255.1;Parent=gene-PUW31_02990;Dbxref=NCBI_GP:WJH09255.1;Name=WJH09255.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459581.1;locus_tag=PUW31_02990;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WJH09255.1;transl_table=11 CP118128.1 Genbank gene 641050 641844 . - . ID=gene-PUW31_02995;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=PUW31_02995 CP118128.1 Protein Homology CDS 641050 641844 . - 0 ID=cds-WJH09256.1;Parent=gene-PUW31_02995;Dbxref=NCBI_GP:WJH09256.1;Name=WJH09256.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459582.1;locus_tag=PUW31_02995;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WJH09256.1;transl_table=11 CP118128.1 Genbank gene 641841 642830 . - . ID=gene-PUW31_03000;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=PUW31_03000 CP118128.1 Protein Homology CDS 641841 642830 . - 0 ID=cds-WJH10647.1;Parent=gene-PUW31_03000;Dbxref=NCBI_GP:WJH10647.1;Name=WJH10647.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459583.1;locus_tag=PUW31_03000;product=iron-enterobactin ABC transporter permease;protein_id=WJH10647.1;transl_table=11 CP118128.1 Genbank gene 642830 643837 . - . ID=gene-PUW31_03005;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=PUW31_03005 CP118128.1 Protein Homology CDS 642830 643837 . - 0 ID=cds-WJH09257.1;Parent=gene-PUW31_03005;Dbxref=NCBI_GP:WJH09257.1;Name=WJH09257.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459584.1;locus_tag=PUW31_03005;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WJH09257.1;transl_table=11 CP118128.1 Genbank pseudogene 643948 645191 . + . ID=gene-PUW31_03010;Name=entS;gbkey=Gene;gene=entS;gene_biotype=pseudogene;locus_tag=PUW31_03010;pseudo=true CP118128.1 Protein Homology CDS 643948 645191 . + 0 ID=cds-PUW31_03010;Parent=gene-PUW31_03010;Note=frameshifted;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459585.1;locus_tag=PUW31_03010;product=enterobactin transporter EntS;pseudo=true;transl_table=11 CP118128.1 Genbank gene 645254 646210 . - . ID=gene-PUW31_03015;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=PUW31_03015 CP118128.1 Protein Homology CDS 645254 646210 . - 0 ID=cds-WJH09258.1;Parent=gene-PUW31_03015;Dbxref=NCBI_GP:WJH09258.1;Name=WJH09258.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459586.1;locus_tag=PUW31_03015;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WJH09258.1;transl_table=11 CP118128.1 Genbank gene 646519 647694 . + . ID=gene-PUW31_03020;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=PUW31_03020 CP118128.1 Protein Homology CDS 646519 647694 . + 0 ID=cds-WJH09259.1;Parent=gene-PUW31_03020;Dbxref=NCBI_GP:WJH09259.1;Name=WJH09259.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459587.1;locus_tag=PUW31_03020;product=isochorismate synthase EntC;protein_id=WJH09259.1;transl_table=11 CP118128.1 Genbank gene 647704 649287 . + . ID=gene-PUW31_03025;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=PUW31_03025 CP118128.1 Protein Homology CDS 647704 649287 . + 0 ID=cds-WJH10648.1;Parent=gene-PUW31_03025;Dbxref=NCBI_GP:WJH10648.1;Name=WJH10648.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001222466.1;locus_tag=PUW31_03025;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WJH10648.1;transl_table=11 CP118128.1 Genbank gene 649328 650185 . + . ID=gene-PUW31_03030;Name=PUW31_03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03030 CP118128.1 Protein Homology CDS 649328 650185 . + 0 ID=cds-WJH09260.1;Parent=gene-PUW31_03030;Dbxref=NCBI_GP:WJH09260.1;Name=WJH09260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459589.1;locus_tag=PUW31_03030;product=isochorismatase;protein_id=WJH09260.1;transl_table=11 CP118128.1 Genbank gene 650185 650940 . + . ID=gene-PUW31_03035;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=PUW31_03035 CP118128.1 Protein Homology CDS 650185 650940 . + 0 ID=cds-WJH09261.1;Parent=gene-PUW31_03035;Dbxref=NCBI_GP:WJH09261.1;Name=WJH09261.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459590.1;locus_tag=PUW31_03035;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WJH09261.1;transl_table=11 CP118128.1 Genbank gene 650943 651356 . + . ID=gene-PUW31_03040;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=PUW31_03040 CP118128.1 Protein Homology CDS 650943 651356 . + 0 ID=cds-WJH09262.1;Parent=gene-PUW31_03040;Dbxref=NCBI_GP:WJH09262.1;Name=WJH09262.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459591.1;locus_tag=PUW31_03040;product=proofreading thioesterase EntH;protein_id=WJH09262.1;transl_table=11 CP118128.1 Genbank gene 651538 653643 . + . ID=gene-PUW31_03045;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=PUW31_03045 CP118128.1 Protein Homology CDS 651538 653643 . + 0 ID=cds-WJH09263.1;Parent=gene-PUW31_03045;Dbxref=NCBI_GP:WJH09263.1;Name=WJH09263.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459592.1;locus_tag=PUW31_03045;product=pyruvate/proton symporter CstA;protein_id=WJH09263.1;transl_table=11 CP118128.1 Genbank gene 653707 653904 . + . ID=gene-PUW31_03050;Name=PUW31_03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03050 CP118128.1 Protein Homology CDS 653707 653904 . + 0 ID=cds-WJH09264.1;Parent=gene-PUW31_03050;Dbxref=NCBI_GP:WJH09264.1;Name=WJH09264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=PUW31_03050;product=YbdD/YjiX family protein;protein_id=WJH09264.1;transl_table=11 CP118128.1 Genbank gene 653940 655028 . - . ID=gene-PUW31_03055;Name=PUW31_03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03055 CP118128.1 Protein Homology CDS 653940 655028 . - 0 ID=cds-WJH09265.1;Parent=gene-PUW31_03055;Dbxref=NCBI_GP:WJH09265.1;Name=WJH09265.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459594.1;locus_tag=PUW31_03055;product=oxidoreductase;protein_id=WJH09265.1;transl_table=11 CP118128.1 Genbank pseudogene 655155 656314 . + . ID=gene-PUW31_03060;Name=PUW31_03060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_03060;pseudo=true CP118128.1 Protein Homology CDS 655155 656314 . + 0 ID=cds-PUW31_03060;Parent=gene-PUW31_03060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459595.1;locus_tag=PUW31_03060;product=pyridoxal phosphate-dependent aminotransferase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 656315 656932 . - . ID=gene-PUW31_03065;Name=PUW31_03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03065 CP118128.1 Protein Homology CDS 656315 656932 . - 0 ID=cds-WJH09266.1;Parent=gene-PUW31_03065;Dbxref=NCBI_GP:WJH09266.1;Name=WJH09266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459596.1;locus_tag=PUW31_03065;product=ParB/RepB/Spo0J family partition protein;protein_id=WJH09266.1;transl_table=11 CP118128.1 Genbank gene 656905 658140 . - . ID=gene-PUW31_03070;Name=PUW31_03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03070 CP118128.1 Protein Homology CDS 656905 658140 . - 0 ID=cds-WJH09267.1;Parent=gene-PUW31_03070;Dbxref=NCBI_GP:WJH09267.1;Name=WJH09267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459597.1;locus_tag=PUW31_03070;product=phosphoadenosine phosphosulfate reductase;protein_id=WJH09267.1;transl_table=11 CP118128.1 Genbank gene 658306 659208 . - . ID=gene-PUW31_03075;Name=PUW31_03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03075 CP118128.1 Protein Homology CDS 658306 659208 . - 0 ID=cds-WJH09268.1;Parent=gene-PUW31_03075;Dbxref=NCBI_GP:WJH09268.1;Name=WJH09268.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459598.1;locus_tag=PUW31_03075;product=LysR family transcriptional regulator;protein_id=WJH09268.1;transl_table=11 CP118128.1 Genbank gene 659525 660271 . - . ID=gene-PUW31_03080;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=PUW31_03080 CP118128.1 Protein Homology CDS 659525 660271 . - 0 ID=cds-WJH09269.1;Parent=gene-PUW31_03080;Dbxref=NCBI_GP:WJH09269.1;Name=WJH09269.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459599.1;locus_tag=PUW31_03080;product=thiol:disulfide interchange protein DsbG;protein_id=WJH09269.1;transl_table=11 CP118128.1 Genbank gene 660712 661275 . + . ID=gene-PUW31_03085;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=PUW31_03085 CP118128.1 Protein Homology CDS 660712 661275 . + 0 ID=cds-WJH09270.1;Parent=gene-PUW31_03085;Dbxref=NCBI_GP:WJH09270.1;Name=WJH09270.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=PUW31_03085;product=alkyl hydroperoxide reductase subunit C;protein_id=WJH09270.1;transl_table=11 CP118128.1 Genbank gene 661517 663082 . + . ID=gene-PUW31_03090;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=PUW31_03090 CP118128.1 Protein Homology CDS 661517 663082 . + 0 ID=cds-WJH09271.1;Parent=gene-PUW31_03090;Dbxref=NCBI_GP:WJH09271.1;Name=WJH09271.1;Ontology_term=GO:0006805,GO:0009398,GO:0016668;gbkey=CDS;gene=ahpF;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA;go_process=xenobiotic metabolic process|0006805||IEA,FMN biosynthetic process|0009398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459601.1;locus_tag=PUW31_03090;product=alkyl hydroperoxide reductase subunit F;protein_id=WJH09271.1;transl_table=11 CP118128.1 Genbank gene 663415 663975 . + . ID=gene-PUW31_03095;Name=PUW31_03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03095 CP118128.1 Protein Homology CDS 663415 663975 . + 0 ID=cds-WJH09272.1;Parent=gene-PUW31_03095;Dbxref=NCBI_GP:WJH09272.1;Name=WJH09272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459602.1;locus_tag=PUW31_03095;product=molecular chaperone;protein_id=WJH09272.1;transl_table=11 CP118128.1 Genbank gene 663968 666247 . + . ID=gene-PUW31_03100;Name=PUW31_03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03100 CP118128.1 Protein Homology CDS 663968 666247 . + 0 ID=cds-WJH09273.1;Parent=gene-PUW31_03100;Dbxref=NCBI_GP:WJH09273.1;Name=WJH09273.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459603.1;locus_tag=PUW31_03100;product=molybdopterin-dependent oxidoreductase;protein_id=WJH09273.1;transl_table=11 CP118128.1 Genbank gene 666244 666801 . + . ID=gene-PUW31_03105;Name=PUW31_03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03105 CP118128.1 Protein Homology CDS 666244 666801 . + 0 ID=cds-WJH09274.1;Parent=gene-PUW31_03105;Dbxref=NCBI_GP:WJH09274.1;Name=WJH09274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459604.1;locus_tag=PUW31_03105;product=4Fe-4S dicluster domain-containing protein;protein_id=WJH09274.1;transl_table=11 CP118128.1 Genbank gene 666801 667568 . + . ID=gene-PUW31_03110;Name=PUW31_03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03110 CP118128.1 Protein Homology CDS 666801 667568 . + 0 ID=cds-WJH09275.1;Parent=gene-PUW31_03110;Dbxref=NCBI_GP:WJH09275.1;Name=WJH09275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459605.1;locus_tag=PUW31_03110;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WJH09275.1;transl_table=11 CP118128.1 Genbank gene 667636 668064 . - . ID=gene-PUW31_03115;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=PUW31_03115 CP118128.1 Protein Homology CDS 667636 668064 . - 0 ID=cds-WJH09276.1;Parent=gene-PUW31_03115;Dbxref=NCBI_GP:WJH09276.1;Name=WJH09276.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459606.1;locus_tag=PUW31_03115;product=universal stress protein UspG;protein_id=WJH09276.1;transl_table=11 CP118128.1 Genbank gene 668287 669534 . + . ID=gene-PUW31_03120;Name=PUW31_03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03120 CP118128.1 Protein Homology CDS 668287 669534 . + 0 ID=cds-WJH09277.1;Parent=gene-PUW31_03120;Dbxref=NCBI_GP:WJH09277.1;Name=WJH09277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459607.1;locus_tag=PUW31_03120;product=glutathione-dependent formaldehyde dehydrogenase;protein_id=WJH09277.1;transl_table=11 CP118128.1 Genbank gene 669617 670027 . - . ID=gene-PUW31_03125;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=PUW31_03125 CP118128.1 Protein Homology CDS 669617 670027 . - 0 ID=cds-WJH09278.1;Parent=gene-PUW31_03125;Dbxref=NCBI_GP:WJH09278.1;Name=WJH09278.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459608.1;locus_tag=PUW31_03125;product=nucleoside diphosphate kinase regulator;protein_id=WJH09278.1;transl_table=11 CP118128.1 Genbank gene 670262 671068 . - . ID=gene-PUW31_03130;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=PUW31_03130 CP118128.1 Protein Homology CDS 670262 671068 . - 0 ID=cds-WJH09279.1;Parent=gene-PUW31_03130;Dbxref=NCBI_GP:WJH09279.1;Name=WJH09279.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459609.1;locus_tag=PUW31_03130;product=ribonuclease I;protein_id=WJH09279.1;transl_table=11 CP118128.1 Genbank gene 671178 672641 . - . ID=gene-PUW31_03135;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=PUW31_03135 CP118128.1 Protein Homology CDS 671178 672641 . - 0 ID=cds-WJH09280.1;Parent=gene-PUW31_03135;Dbxref=NCBI_GP:WJH09280.1;Name=WJH09280.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459610.1;locus_tag=PUW31_03135;product=citrate/succinate antiporter CitT;protein_id=WJH09280.1;transl_table=11 CP118128.1 Genbank gene 672700 673575 . - . ID=gene-PUW31_03140;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=PUW31_03140 CP118128.1 Protein Homology CDS 672700 673575 . - 0 ID=cds-WJH09281.1;Parent=gene-PUW31_03140;Dbxref=NCBI_GP:WJH09281.1;Name=WJH09281.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459611.1;locus_tag=PUW31_03140;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WJH09281.1;transl_table=11 CP118128.1 Genbank gene 673547 674098 . - . ID=gene-PUW31_03145;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=PUW31_03145 CP118128.1 Protein Homology CDS 673547 674098 . - 0 ID=cds-WJH09282.1;Parent=gene-PUW31_03145;Dbxref=NCBI_GP:WJH09282.1;Name=WJH09282.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459612.1;locus_tag=PUW31_03145;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WJH09282.1;transl_table=11 CP118128.1 Genbank gene 674102 675631 . - . ID=gene-PUW31_03150;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=PUW31_03150 CP118128.1 Protein Homology CDS 674102 675631 . - 0 ID=cds-WJH09283.1;Parent=gene-PUW31_03150;Dbxref=NCBI_GP:WJH09283.1;Name=WJH09283.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459613.1;locus_tag=PUW31_03150;product=citrate lyase subunit alpha;protein_id=WJH09283.1;transl_table=11 CP118128.1 Genbank gene 675641 676549 . - . ID=gene-PUW31_03155;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=PUW31_03155 CP118128.1 Protein Homology CDS 675641 676549 . - 0 ID=cds-WJH09284.1;Parent=gene-PUW31_03155;Dbxref=NCBI_GP:WJH09284.1;Name=WJH09284.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citE;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459614.1;locus_tag=PUW31_03155;product=citrate (pro-3S)-lyase subunit beta;protein_id=WJH09284.1;transl_table=11 CP118128.1 Genbank gene 676546 676842 . - . ID=gene-PUW31_03160;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=PUW31_03160 CP118128.1 Protein Homology CDS 676546 676842 . - 0 ID=cds-WJH09285.1;Parent=gene-PUW31_03160;Dbxref=NCBI_GP:WJH09285.1;Name=WJH09285.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citD;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459615.1;locus_tag=PUW31_03160;product=citrate lyase acyl carrier protein;protein_id=WJH09285.1;transl_table=11 CP118128.1 Genbank gene 676839 677915 . - . ID=gene-PUW31_03165;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=PUW31_03165 CP118128.1 Protein Homology CDS 676839 677915 . - 0 ID=cds-WJH09286.1;Parent=gene-PUW31_03165;Dbxref=NCBI_GP:WJH09286.1;Name=WJH09286.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459616.1;locus_tag=PUW31_03165;product=[citrate (pro-3S)-lyase] ligase;protein_id=WJH09286.1;transl_table=11 CP118128.1 Genbank pseudogene 678300 679960 . + . ID=gene-PUW31_03170;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=pseudogene;locus_tag=PUW31_03170;pseudo=true CP118128.1 Protein Homology CDS 678300 679960 . + 0 ID=cds-PUW31_03170;Parent=gene-PUW31_03170;Note=frameshifted;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459617.1;locus_tag=PUW31_03170;product=sensor histidine kinase DpiB;pseudo=true;transl_table=11 CP118128.1 Genbank gene 679929 680609 . + . ID=gene-PUW31_03175;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=PUW31_03175 CP118128.1 Protein Homology CDS 679929 680609 . + 0 ID=cds-WJH09287.1;Parent=gene-PUW31_03175;Dbxref=NCBI_GP:WJH09287.1;Name=WJH09287.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459618.1;locus_tag=PUW31_03175;product=two-component response regulator DpiA;protein_id=WJH09287.1;transl_table=11 CP118128.1 Genbank gene 680663 682048 . - . ID=gene-PUW31_03180;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=PUW31_03180 CP118128.1 Protein Homology CDS 680663 682048 . - 0 ID=cds-WJH09288.1;Parent=gene-PUW31_03180;Dbxref=NCBI_GP:WJH09288.1;Name=WJH09288.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459619.1;locus_tag=PUW31_03180;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WJH09288.1;transl_table=11 CP118128.1 Genbank gene 682427 682999 . + . ID=gene-PUW31_03185;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=PUW31_03185 CP118128.1 Protein Homology CDS 682427 682999 . + 0 ID=cds-WJH10649.1;Parent=gene-PUW31_03185;Dbxref=NCBI_GP:WJH10649.1;Name=WJH10649.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459620.1;locus_tag=PUW31_03185;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WJH10649.1;transl_table=11 CP118128.1 Genbank gene 683187 683396 . + . ID=gene-PUW31_03190;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=PUW31_03190 CP118128.1 Protein Homology CDS 683187 683396 . + 0 ID=cds-WJH09289.1;Parent=gene-PUW31_03190;Dbxref=NCBI_GP:WJH09289.1;Name=WJH09289.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459621.1;locus_tag=PUW31_03190;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WJH09289.1;transl_table=11 CP118128.1 Genbank gene 683454 683837 . - . ID=gene-PUW31_03195;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=PUW31_03195 CP118128.1 Protein Homology CDS 683454 683837 . - 0 ID=cds-WJH09290.1;Parent=gene-PUW31_03195;Dbxref=NCBI_GP:WJH09290.1;Name=WJH09290.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459622.1;locus_tag=PUW31_03195;product=fluoride efflux transporter CrcB;protein_id=WJH09290.1;transl_table=11 CP118128.1 Genbank gene 683928 684716 . + . ID=gene-PUW31_03200;Name=PUW31_03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03200 CP118128.1 Protein Homology CDS 683928 684716 . + 0 ID=cds-WJH09291.1;Parent=gene-PUW31_03200;Dbxref=NCBI_GP:WJH09291.1;Name=WJH09291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459623.1;locus_tag=PUW31_03200;product=deaminated glutathione amidase;protein_id=WJH09291.1;transl_table=11 CP118128.1 Genbank gene 684845 685048 . + . ID=gene-PUW31_03205;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=PUW31_03205 CP118128.1 Protein Homology CDS 684845 685048 . + 0 ID=cds-WJH09292.1;Parent=gene-PUW31_03205;Dbxref=NCBI_GP:WJH09292.1;Name=WJH09292.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459624.1;locus_tag=PUW31_03205;product=twin-arginine translocase subunit TatE;protein_id=WJH09292.1;transl_table=11 CP118128.1 Genbank gene 685134 686099 . - . ID=gene-PUW31_03210;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=PUW31_03210 CP118128.1 Protein Homology CDS 685134 686099 . - 0 ID=cds-WJH09293.1;Parent=gene-PUW31_03210;Dbxref=NCBI_GP:WJH09293.1;Name=WJH09293.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=PUW31_03210;product=lipoyl synthase;protein_id=WJH09293.1;transl_table=11 CP118128.1 Genbank gene 686305 687258 . - . ID=gene-PUW31_03215;Name=PUW31_03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03215 CP118128.1 Protein Homology CDS 686305 687258 . - 0 ID=cds-WJH09294.1;Parent=gene-PUW31_03215;Dbxref=NCBI_GP:WJH09294.1;Name=WJH09294.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459626.1;locus_tag=PUW31_03215;product=YbeF family transcriptional regulator;protein_id=WJH09294.1;transl_table=11 CP118128.1 Genbank gene 687560 688201 . - . ID=gene-PUW31_03220;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=PUW31_03220 CP118128.1 Protein Homology CDS 687560 688201 . - 0 ID=cds-WJH09295.1;Parent=gene-PUW31_03220;Dbxref=NCBI_GP:WJH09295.1;Name=WJH09295.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=PUW31_03220;product=lipoyl(octanoyl) transferase LipB;protein_id=WJH09295.1;transl_table=11 CP118128.1 Genbank gene 688301 688564 . - . ID=gene-PUW31_03225;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=PUW31_03225 CP118128.1 Protein Homology CDS 688301 688564 . - 0 ID=cds-WJH09296.1;Parent=gene-PUW31_03225;Dbxref=NCBI_GP:WJH09296.1;Name=WJH09296.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459628.1;locus_tag=PUW31_03225;product=DUF493 family protein YbeD;protein_id=WJH09296.1;transl_table=11 CP118128.1 Genbank pseudogene 688672 689882 . - . ID=gene-PUW31_03230;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=pseudogene;locus_tag=PUW31_03230;pseudo=true CP118128.1 Protein Homology CDS 688672 689882 . - 0 ID=cds-PUW31_03230;Parent=gene-PUW31_03230;Note=frameshifted;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459629.1;locus_tag=PUW31_03230;product=D-alanyl-D-alanine carboxypeptidase DacA;pseudo=true;transl_table=11 CP118128.1 Genbank gene 690022 691155 . - . ID=gene-PUW31_03235;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=PUW31_03235 CP118128.1 Protein Homology CDS 690022 691155 . - 0 ID=cds-WJH09297.1;Parent=gene-PUW31_03235;Dbxref=NCBI_GP:WJH09297.1;Name=WJH09297.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459630.1;locus_tag=PUW31_03235;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WJH09297.1;transl_table=11 CP118128.1 Genbank gene 691166 692278 . - . ID=gene-PUW31_03240;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=PUW31_03240 CP118128.1 Protein Homology CDS 691166 692278 . - 0 ID=cds-WJH09298.1;Parent=gene-PUW31_03240;Dbxref=NCBI_GP:WJH09298.1;Name=WJH09298.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=PUW31_03240;product=peptidoglycan glycosyltransferase MrdB;protein_id=WJH09298.1;transl_table=11 CP118128.1 Genbank gene 692281 694182 . - . ID=gene-PUW31_03245;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=PUW31_03245 CP118128.1 Protein Homology CDS 692281 694182 . - 0 ID=cds-WJH09299.1;Parent=gene-PUW31_03245;Dbxref=NCBI_GP:WJH09299.1;Name=WJH09299.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459632.1;locus_tag=PUW31_03245;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WJH09299.1;transl_table=11 CP118128.1 Genbank gene 694213 694680 . - . ID=gene-PUW31_03250;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=PUW31_03250 CP118128.1 Protein Homology CDS 694213 694680 . - 0 ID=cds-WJH09300.1;Parent=gene-PUW31_03250;Dbxref=NCBI_GP:WJH09300.1;Name=WJH09300.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=PUW31_03250;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WJH09300.1;transl_table=11 CP118128.1 Genbank gene 694684 695001 . - . ID=gene-PUW31_03255;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=PUW31_03255 CP118128.1 Protein Homology CDS 694684 695001 . - 0 ID=cds-WJH09301.1;Parent=gene-PUW31_03255;Dbxref=NCBI_GP:WJH09301.1;Name=WJH09301.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=PUW31_03255;product=ribosome silencing factor;protein_id=WJH09301.1;transl_table=11 CP118128.1 Genbank gene 695330 695938 . - . ID=gene-PUW31_03260;Name=PUW31_03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03260 CP118128.1 Protein Homology CDS 695330 695938 . - 0 ID=cds-WJH09302.1;Parent=gene-PUW31_03260;Dbxref=NCBI_GP:WJH09302.1;Name=WJH09302.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459635.1;locus_tag=PUW31_03260;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WJH09302.1;transl_table=11 CP118128.1 Genbank pseudogene 696035 697129 . + . ID=gene-PUW31_03265;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=pseudogene;locus_tag=PUW31_03265;pseudo=true CP118128.1 Protein Homology CDS 696035 697129 . + 0 ID=cds-PUW31_03265;Parent=gene-PUW31_03265;Note=internal stop;Ontology_term=GO:0009236,GO:0048472,GO:0005737;gbkey=CDS;gene=cobD;go_component=cytoplasm|0005737||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459636.1;locus_tag=PUW31_03265;product=threonine-phosphate decarboxylase CobD;pseudo=true;transl_table=11 CP118128.1 Genbank gene 697104 697745 . - . ID=gene-PUW31_03270;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=PUW31_03270 CP118128.1 Protein Homology CDS 697104 697745 . - 0 ID=cds-WJH09303.1;Parent=gene-PUW31_03270;Dbxref=NCBI_GP:WJH09303.1;Name=WJH09303.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459637.1;locus_tag=PUW31_03270;product=nicotinate-nucleotide adenylyltransferase;protein_id=WJH09303.1;transl_table=11 CP118128.1 Genbank gene 697747 698778 . - . ID=gene-PUW31_03275;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=PUW31_03275 CP118128.1 Protein Homology CDS 697747 698778 . - 0 ID=cds-WJH09304.1;Parent=gene-PUW31_03275;Dbxref=NCBI_GP:WJH09304.1;Name=WJH09304.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459638.1;locus_tag=PUW31_03275;product=DNA polymerase III subunit delta;protein_id=WJH09304.1;transl_table=11 CP118128.1 Genbank gene 698778 699368 . - . ID=gene-PUW31_03280;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=PUW31_03280 CP118128.1 Protein Homology CDS 698778 699368 . - 0 ID=cds-WJH09305.1;Parent=gene-PUW31_03280;Dbxref=NCBI_GP:WJH09305.1;Name=WJH09305.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459639.1;locus_tag=PUW31_03280;product=LPS assembly lipoprotein LptE;protein_id=WJH09305.1;transl_table=11 CP118128.1 Genbank gene 699383 701965 . - . ID=gene-PUW31_03285;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=PUW31_03285 CP118128.1 Protein Homology CDS 699383 701965 . - 0 ID=cds-WJH09306.1;Parent=gene-PUW31_03285;Dbxref=NCBI_GP:WJH09306.1;Name=WJH09306.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=PUW31_03285;product=leucine--tRNA ligase;protein_id=WJH09306.1;transl_table=11 CP118128.1 Genbank pseudogene 702202 702542 . + . ID=gene-PUW31_03290;Name=PUW31_03290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_03290;pseudo=true CP118128.1 Protein Homology CDS 702202 702542 . + 0 ID=cds-PUW31_03290;Parent=gene-PUW31_03290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447100.1;locus_tag=PUW31_03290;product=UxaA family hydrolase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 702559 703731 . + . ID=gene-PUW31_03295;Name=PUW31_03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03295 CP118128.1 Protein Homology CDS 702559 703731 . + 0 ID=cds-WJH09307.1;Parent=gene-PUW31_03295;Dbxref=NCBI_GP:WJH09307.1;Name=WJH09307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447101.1;locus_tag=PUW31_03295;product=UxaA family hydrolase;protein_id=WJH09307.1;transl_table=11 CP118128.1 Genbank gene 703781 704734 . + . ID=gene-PUW31_03300;Name=PUW31_03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03300 CP118128.1 Protein Homology CDS 703781 704734 . + 0 ID=cds-WJH09308.1;Parent=gene-PUW31_03300;Dbxref=NCBI_GP:WJH09308.1;Name=WJH09308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459643.1;locus_tag=PUW31_03300;product=2-keto-3-deoxygluconate permease 2;protein_id=WJH09308.1;transl_table=11 CP118128.1 Genbank pseudogene 704802 706730 . + . ID=gene-PUW31_03305;Name=PUW31_03305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_03305;pseudo=true CP118128.1 Protein Homology CDS 704802 706730 . + 0 ID=cds-PUW31_03305;Parent=gene-PUW31_03305;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459644.1;locus_tag=PUW31_03305;product=sigma-54-dependent Fis family transcriptional regulator;pseudo=true;transl_table=11 CP118128.1 Genbank gene 706823 707296 . + . ID=gene-PUW31_03310;Name=PUW31_03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03310 CP118128.1 Protein Homology CDS 706823 707296 . + 0 ID=cds-WJH09309.1;Parent=gene-PUW31_03310;Dbxref=NCBI_GP:WJH09309.1;Name=WJH09309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459645.1;locus_tag=PUW31_03310;product=zinc ribbon-containing protein;protein_id=WJH09309.1;transl_table=11 CP118128.1 Genbank gene 707335 708270 . - . ID=gene-PUW31_03315;Name=PUW31_03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03315 CP118128.1 Protein Homology CDS 707335 708270 . - 0 ID=cds-WJH10650.1;Parent=gene-PUW31_03315;Dbxref=NCBI_GP:WJH10650.1;Name=WJH10650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459646.1;locus_tag=PUW31_03315;product=tetratricopeptide repeat protein;protein_id=WJH10650.1;transl_table=11 CP118128.1 Genbank gene 708455 709162 . + . ID=gene-PUW31_03320;Name=PUW31_03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03320 CP118128.1 Protein Homology CDS 708455 709162 . + 0 ID=cds-WJH09310.1;Parent=gene-PUW31_03320;Dbxref=NCBI_GP:WJH09310.1;Name=WJH09310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459647.1;locus_tag=PUW31_03320;product=DUF1266 domain-containing protein;protein_id=WJH09310.1;transl_table=11 CP118128.1 Genbank gene 709159 710592 . + . ID=gene-PUW31_03325;Name=PUW31_03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03325 CP118128.1 Protein Homology CDS 709159 710592 . + 0 ID=cds-WJH09311.1;Parent=gene-PUW31_03325;Dbxref=NCBI_GP:WJH09311.1;Name=WJH09311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459648.1;locus_tag=PUW31_03325;product=J domain-containing protein;protein_id=WJH09311.1;transl_table=11 CP118128.1 Genbank gene 710604 711299 . + . ID=gene-PUW31_03330;Name=PUW31_03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03330 CP118128.1 Protein Homology CDS 710604 711299 . + 0 ID=cds-WJH09312.1;Parent=gene-PUW31_03330;Dbxref=NCBI_GP:WJH09312.1;Name=WJH09312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459649.1;locus_tag=PUW31_03330;product=DUF1266 domain-containing protein;protein_id=WJH09312.1;transl_table=11 CP118128.1 Genbank gene 711296 712768 . + . ID=gene-PUW31_03335;Name=PUW31_03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03335 CP118128.1 Protein Homology CDS 711296 712768 . + 0 ID=cds-WJH09313.1;Parent=gene-PUW31_03335;Dbxref=NCBI_GP:WJH09313.1;Name=WJH09313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459650.1;locus_tag=PUW31_03335;product=J domain-containing protein;protein_id=WJH09313.1;transl_table=11 CP118128.1 Genbank gene 712790 714469 . - . ID=gene-PUW31_03340;Name=PUW31_03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03340 CP118128.1 Protein Homology CDS 712790 714469 . - 0 ID=cds-WJH09314.1;Parent=gene-PUW31_03340;Dbxref=NCBI_GP:WJH09314.1;Name=WJH09314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459651.1;locus_tag=PUW31_03340;product=molecular chaperone HscC;protein_id=WJH09314.1;transl_table=11 CP118128.1 Genbank gene 714545 715783 . - . ID=gene-PUW31_03345;Name=PUW31_03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03345 CP118128.1 Protein Homology CDS 714545 715783 . - 0 ID=cds-WJH09315.1;Parent=gene-PUW31_03345;Dbxref=NCBI_GP:WJH09315.1;Name=WJH09315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459652.1;locus_tag=PUW31_03345;product=hypothetical protein;protein_id=WJH09315.1;transl_table=11 CP118128.1 Genbank gene 715815 716750 . - . ID=gene-PUW31_03350;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=PUW31_03350 CP118128.1 Protein Homology CDS 715815 716750 . - 0 ID=cds-WJH09316.1;Parent=gene-PUW31_03350;Dbxref=NCBI_GP:WJH09316.1;Name=WJH09316.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459653.1;locus_tag=PUW31_03350;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WJH09316.1;transl_table=11 CP118128.1 Genbank gene 716867 717592 . - . ID=gene-PUW31_03355;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=PUW31_03355 CP118128.1 Protein Homology CDS 716867 717592 . - 0 ID=cds-WJH09317.1;Parent=gene-PUW31_03355;Dbxref=NCBI_GP:WJH09317.1;Name=WJH09317.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=PUW31_03355;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=WJH09317.1;transl_table=11 CP118128.1 Genbank pseudogene 717592 718265 . - . ID=gene-PUW31_03360;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=pseudogene;locus_tag=PUW31_03360;pseudo=true CP118128.1 Protein Homology CDS 717592 718265 . - 0 ID=cds-PUW31_03360;Parent=gene-PUW31_03360;Note=frameshifted;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459655.1;locus_tag=PUW31_03360;product=glutamate/aspartate ABC transporter permease GltK;pseudo=true;transl_table=11 CP118128.1 Genbank gene 718265 719005 . - . ID=gene-PUW31_03365;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=PUW31_03365 CP118128.1 Protein Homology CDS 718265 719005 . - 0 ID=cds-WJH09318.1;Parent=gene-PUW31_03365;Dbxref=NCBI_GP:WJH09318.1;Name=WJH09318.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459656.1;locus_tag=PUW31_03365;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WJH09318.1;transl_table=11 CP118128.1 Genbank pseudogene 719165 720073 . - . ID=gene-PUW31_03370;Name=PUW31_03370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_03370;pseudo=true CP118128.1 Protein Homology CDS 719165 720073 . - 0 ID=cds-PUW31_03370;Parent=gene-PUW31_03370;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308721.1;locus_tag=PUW31_03370;product=amino acid ABC transporter substrate-binding protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 720428 721966 . - . ID=gene-PUW31_03375;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=PUW31_03375 CP118128.1 Protein Homology CDS 720428 721966 . - 0 ID=cds-WJH10651.1;Parent=gene-PUW31_03375;Dbxref=NCBI_GP:WJH10651.1;Name=WJH10651.1;Ontology_term=GO:0006497,GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=protein lipidation|0006497||IEA,lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459658.1;locus_tag=PUW31_03375;product=apolipoprotein N-acyltransferase;protein_id=WJH10651.1;transl_table=11 CP118128.1 Genbank gene 721986 722864 . - . ID=gene-PUW31_03380;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=PUW31_03380 CP118128.1 Protein Homology CDS 721986 722864 . - 0 ID=cds-WJH09319.1;Parent=gene-PUW31_03380;Dbxref=NCBI_GP:WJH09319.1;Name=WJH09319.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459659.1;locus_tag=PUW31_03380;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WJH09319.1;transl_table=11 CP118128.1 Genbank gene 723022 723495 . - . ID=gene-PUW31_03385;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=PUW31_03385 CP118128.1 Protein Homology CDS 723022 723495 . - 0 ID=cds-WJH09320.1;Parent=gene-PUW31_03385;Dbxref=NCBI_GP:WJH09320.1;Name=WJH09320.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459660.1;locus_tag=PUW31_03385;product=rRNA maturation RNase YbeY;protein_id=WJH09320.1;transl_table=11 CP118128.1 Genbank gene 723492 724538 . - . ID=gene-PUW31_03390;Name=PUW31_03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03390 CP118128.1 Protein Homology CDS 723492 724538 . - 0 ID=cds-WJH09321.1;Parent=gene-PUW31_03390;Dbxref=NCBI_GP:WJH09321.1;Name=WJH09321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225825.1;locus_tag=PUW31_03390;product=PhoH family protein;protein_id=WJH09321.1;transl_table=11 CP118128.1 Genbank gene 724743 726167 . - . ID=gene-PUW31_03395;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=PUW31_03395 CP118128.1 Protein Homology CDS 724743 726167 . - 0 ID=cds-WJH09322.1;Parent=gene-PUW31_03395;Dbxref=NCBI_GP:WJH09322.1;Name=WJH09322.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459662.1;locus_tag=PUW31_03395;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WJH09322.1;transl_table=11 CP118128.1 Genbank gene 726311 727486 . + . ID=gene-PUW31_03400;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=PUW31_03400 CP118128.1 Protein Homology CDS 726311 727486 . + 0 ID=cds-WJH09323.1;Parent=gene-PUW31_03400;Dbxref=NCBI_GP:WJH09323.1;Name=WJH09323.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459663.1;locus_tag=PUW31_03400;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WJH09323.1;transl_table=11 CP118128.1 Genbank gene 727553 728128 . - . ID=gene-PUW31_03405;Name=PUW31_03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03405 CP118128.1 Protein Homology CDS 727553 728128 . - 0 ID=cds-WJH09324.1;Parent=gene-PUW31_03405;Dbxref=NCBI_GP:WJH09324.1;Name=WJH09324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459664.1;locus_tag=PUW31_03405;product=hypothetical protein;protein_id=WJH09324.1;transl_table=11 CP118128.1 Genbank gene 728264 728338 . - . ID=gene-PUW31_03410;Name=PUW31_03410;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_03410 CP118128.1 tRNAscan-SE tRNA 728264 728338 . - . ID=rna-PUW31_03410;Parent=gene-PUW31_03410;anticodon=(pos:complement(728304..728306));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_03410;product=tRNA-Gln CP118128.1 tRNAscan-SE exon 728264 728338 . - . ID=exon-PUW31_03410-1;Parent=rna-PUW31_03410;anticodon=(pos:complement(728304..728306));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_03410;product=tRNA-Gln CP118128.1 Genbank gene 728382 728456 . - . ID=gene-PUW31_03415;Name=PUW31_03415;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_03415 CP118128.1 tRNAscan-SE tRNA 728382 728456 . - . ID=rna-PUW31_03415;Parent=gene-PUW31_03415;anticodon=(pos:complement(728422..728424));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_03415;product=tRNA-Gln CP118128.1 tRNAscan-SE exon 728382 728456 . - . ID=exon-PUW31_03415-1;Parent=rna-PUW31_03415;anticodon=(pos:complement(728422..728424));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_03415;product=tRNA-Gln CP118128.1 Genbank gene 728505 728578 . - . ID=gene-PUW31_03420;Name=PUW31_03420;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_03420 CP118128.1 tRNAscan-SE tRNA 728505 728578 . - . ID=rna-PUW31_03420;Parent=gene-PUW31_03420;anticodon=(pos:complement(728542..728544));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_03420;product=tRNA-Met CP118128.1 tRNAscan-SE exon 728505 728578 . - . ID=exon-PUW31_03420-1;Parent=rna-PUW31_03420;anticodon=(pos:complement(728542..728544));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_03420;product=tRNA-Met CP118128.1 Genbank gene 728594 728668 . - . ID=gene-PUW31_03425;Name=PUW31_03425;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_03425 CP118128.1 tRNAscan-SE tRNA 728594 728668 . - . ID=rna-PUW31_03425;Parent=gene-PUW31_03425;anticodon=(pos:complement(728634..728636));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_03425;product=tRNA-Gln CP118128.1 tRNAscan-SE exon 728594 728668 . - . ID=exon-PUW31_03425-1;Parent=rna-PUW31_03425;anticodon=(pos:complement(728634..728636));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_03425;product=tRNA-Gln CP118128.1 Genbank gene 728692 728776 . - . ID=gene-PUW31_03430;Name=PUW31_03430;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_03430 CP118128.1 tRNAscan-SE tRNA 728692 728776 . - . ID=rna-PUW31_03430;Parent=gene-PUW31_03430;anticodon=(pos:complement(728740..728742));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_03430;product=tRNA-Leu CP118128.1 tRNAscan-SE exon 728692 728776 . - . ID=exon-PUW31_03430-1;Parent=rna-PUW31_03430;anticodon=(pos:complement(728740..728742));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_03430;product=tRNA-Leu CP118128.1 Genbank gene 728785 728861 . - . ID=gene-PUW31_03435;Name=PUW31_03435;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_03435 CP118128.1 tRNAscan-SE tRNA 728785 728861 . - . ID=rna-PUW31_03435;Parent=gene-PUW31_03435;anticodon=(pos:complement(728825..728827));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_03435;product=tRNA-Met CP118128.1 tRNAscan-SE exon 728785 728861 . - . ID=exon-PUW31_03435-1;Parent=rna-PUW31_03435;anticodon=(pos:complement(728825..728827));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_03435;product=tRNA-Met CP118128.1 Genbank gene 729083 730747 . - . ID=gene-PUW31_03440;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=PUW31_03440 CP118128.1 Protein Homology CDS 729083 730747 . - 0 ID=cds-WJH09325.1;Parent=gene-PUW31_03440;Dbxref=NCBI_GP:WJH09325.1;Name=WJH09325.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=PUW31_03440;product=asparagine synthase B;protein_id=WJH09325.1;transl_table=11 CP118128.1 Genbank gene 731037 731789 . - . ID=gene-PUW31_03445;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=PUW31_03445 CP118128.1 Protein Homology CDS 731037 731789 . - 0 ID=cds-WJH09326.1;Parent=gene-PUW31_03445;Dbxref=NCBI_GP:WJH09326.1;Name=WJH09326.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373873.1;locus_tag=PUW31_03445;product=ribonucleotide monophosphatase NagD;protein_id=WJH09326.1;transl_table=11 CP118128.1 Genbank gene 731836 733056 . - . ID=gene-PUW31_03450;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=PUW31_03450 CP118128.1 Protein Homology CDS 731836 733056 . - 0 ID=cds-WJH09327.1;Parent=gene-PUW31_03450;Dbxref=NCBI_GP:WJH09327.1;Name=WJH09327.1;gbkey=CDS;gene=nagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459667.1;locus_tag=PUW31_03450;product=DNA-binding transcriptional regulator NagC;protein_id=WJH09327.1;transl_table=11 CP118128.1 Genbank gene 733061 734215 . - . ID=gene-PUW31_03455;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=PUW31_03455 CP118128.1 Protein Homology CDS 733061 734215 . - 0 ID=cds-WJH09328.1;Parent=gene-PUW31_03455;Dbxref=NCBI_GP:WJH09328.1;Name=WJH09328.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459668.1;locus_tag=PUW31_03455;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WJH09328.1;transl_table=11 CP118128.1 Genbank gene 734274 735074 . - . ID=gene-PUW31_03460;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=PUW31_03460 CP118128.1 Protein Homology CDS 734274 735074 . - 0 ID=cds-WJH09329.1;Parent=gene-PUW31_03460;Dbxref=NCBI_GP:WJH09329.1;Name=WJH09329.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=PUW31_03460;product=glucosamine-6-phosphate deaminase;protein_id=WJH09329.1;transl_table=11 CP118128.1 Genbank gene 735400 737352 . + . ID=gene-PUW31_03465;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=PUW31_03465 CP118128.1 Protein Homology CDS 735400 737352 . + 0 ID=cds-WJH09330.1;Parent=gene-PUW31_03465;Dbxref=NCBI_GP:WJH09330.1;Name=WJH09330.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459670.1;locus_tag=PUW31_03465;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WJH09330.1;transl_table=11 CP118128.1 Genbank gene 737563 739230 . + . ID=gene-PUW31_03470;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=PUW31_03470 CP118128.1 Protein Homology CDS 737563 739230 . + 0 ID=cds-WJH09331.1;Parent=gene-PUW31_03470;Dbxref=NCBI_GP:WJH09331.1;Name=WJH09331.1;Ontology_term=GO:0006425,GO:0004819,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=glutamine-tRNA ligase activity|0004819||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459671.1;locus_tag=PUW31_03470;product=glutamine--tRNA ligase;protein_id=WJH09331.1;transl_table=11 CP118128.1 Genbank gene 739891 741297 . + . ID=gene-PUW31_03475;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=PUW31_03475 CP118128.1 Protein Homology CDS 739891 741297 . + 0 ID=cds-WJH09332.1;Parent=gene-PUW31_03475;Dbxref=NCBI_GP:WJH09332.1;Name=WJH09332.1;gbkey=CDS;gene=chiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459672.1;locus_tag=PUW31_03475;product=chitoporin;protein_id=WJH09332.1;transl_table=11 CP118128.1 Genbank gene 741347 741679 . + . ID=gene-PUW31_03480;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=PUW31_03480 CP118128.1 Protein Homology CDS 741347 741679 . + 0 ID=cds-WJH09333.1;Parent=gene-PUW31_03480;Dbxref=NCBI_GP:WJH09333.1;Name=WJH09333.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459673.1;locus_tag=PUW31_03480;product=ChiQ/YbfN family lipoprotein;protein_id=WJH09333.1;transl_table=11 CP118128.1 Genbank gene 741728 743032 . - . ID=gene-PUW31_03485;Name=tcuC;gbkey=Gene;gene=tcuC;gene_biotype=protein_coding;locus_tag=PUW31_03485 CP118128.1 Protein Homology CDS 741728 743032 . - 0 ID=cds-WJH09334.1;Parent=gene-PUW31_03485;Dbxref=NCBI_GP:WJH09334.1;Name=WJH09334.1;gbkey=CDS;gene=tcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459674.1;locus_tag=PUW31_03485;product=tricarballylate/proton symporter TcuC;protein_id=WJH09334.1;transl_table=11 CP118128.1 Genbank gene 743083 744222 . - . ID=gene-PUW31_03490;Name=tcuB;gbkey=Gene;gene=tcuB;gene_biotype=protein_coding;locus_tag=PUW31_03490 CP118128.1 Protein Homology CDS 743083 744222 . - 0 ID=cds-WJH09335.1;Parent=gene-PUW31_03490;Dbxref=NCBI_GP:WJH09335.1;Name=WJH09335.1;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459675.1;locus_tag=PUW31_03490;product=tricarballylate utilization protein TcuB;protein_id=WJH09335.1;transl_table=11 CP118128.1 Genbank gene 744209 745612 . - . ID=gene-PUW31_03495;Name=tcuA;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=PUW31_03495 CP118128.1 Protein Homology CDS 744209 745612 . - 0 ID=cds-WJH09336.1;Parent=gene-PUW31_03495;Dbxref=NCBI_GP:WJH09336.1;Name=WJH09336.1;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459676.1;locus_tag=PUW31_03495;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=WJH09336.1;transl_table=11 CP118128.1 Genbank gene 745710 746636 . - . ID=gene-PUW31_03500;Name=tcuR;gbkey=Gene;gene=tcuR;gene_biotype=protein_coding;locus_tag=PUW31_03500 CP118128.1 Protein Homology CDS 745710 746636 . - 0 ID=cds-WJH09337.1;Parent=gene-PUW31_03500;Dbxref=NCBI_GP:WJH09337.1;Name=WJH09337.1;gbkey=CDS;gene=tcuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459677.1;locus_tag=PUW31_03500;product=tricarballylate utilization LysR family transcriptional regulator TcuR;protein_id=WJH09337.1;transl_table=11 CP118128.1 Genbank gene 746751 747203 . - . ID=gene-PUW31_03505;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=PUW31_03505 CP118128.1 Protein Homology CDS 746751 747203 . - 0 ID=cds-WJH09338.1;Parent=gene-PUW31_03505;Dbxref=NCBI_GP:WJH09338.1;Name=WJH09338.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459678.1;locus_tag=PUW31_03505;product=ferric iron uptake transcriptional regulator;protein_id=WJH09338.1;transl_table=11 CP118128.1 Genbank pseudogene 747196 747281 . - . ID=gene-PUW31_03510;Name=PUW31_03510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_03510;pseudo=true CP118128.1 Protein Homology CDS 747196 747281 . - 0 ID=cds-PUW31_03510;Parent=gene-PUW31_03510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=PUW31_03510;product=ryhB-regulated fur leader peptide;pseudo=true;transl_table=11 CP118128.1 Genbank gene 747485 748015 . - . ID=gene-PUW31_03515;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=PUW31_03515 CP118128.1 Protein Homology CDS 747485 748015 . - 0 ID=cds-WJH09339.1;Parent=gene-PUW31_03515;Dbxref=NCBI_GP:WJH09339.1;Name=WJH09339.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459679.1;locus_tag=PUW31_03515;product=flavodoxin FldA;protein_id=WJH09339.1;transl_table=11 CP118128.1 Genbank gene 748166 748459 . - . ID=gene-PUW31_03520;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=PUW31_03520 CP118128.1 Protein Homology CDS 748166 748459 . - 0 ID=cds-WJH09340.1;Parent=gene-PUW31_03520;Dbxref=NCBI_GP:WJH09340.1;Name=WJH09340.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459680.1;locus_tag=PUW31_03520;product=LexA regulated protein;protein_id=WJH09340.1;transl_table=11 CP118128.1 Genbank gene 748593 749363 . - . ID=gene-PUW31_03525;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=PUW31_03525 CP118128.1 Protein Homology CDS 748593 749363 . - 0 ID=cds-WJH09341.1;Parent=gene-PUW31_03525;Dbxref=NCBI_GP:WJH09341.1;Name=WJH09341.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459681.1;locus_tag=PUW31_03525;product=esterase;protein_id=WJH09341.1;transl_table=11 CP118128.1 Genbank gene 749548 750090 . + . ID=gene-PUW31_03530;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=PUW31_03530 CP118128.1 Protein Homology CDS 749548 750090 . + 0 ID=cds-WJH09342.1;Parent=gene-PUW31_03530;Dbxref=NCBI_GP:WJH09342.1;Name=WJH09342.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459682.1;locus_tag=PUW31_03530;product=replication initiation negative regulator SeqA;protein_id=WJH09342.1;transl_table=11 CP118128.1 Genbank gene 750115 751755 . + . ID=gene-PUW31_03535;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=PUW31_03535 CP118128.1 Protein Homology CDS 750115 751755 . + 0 ID=cds-WJH09343.1;Parent=gene-PUW31_03535;Dbxref=NCBI_GP:WJH09343.1;Name=WJH09343.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459683.1;locus_tag=PUW31_03535;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WJH09343.1;transl_table=11 CP118128.1 Genbank gene 751870 752355 . - . ID=gene-PUW31_03540;Name=PUW31_03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03540 CP118128.1 Protein Homology CDS 751870 752355 . - 0 ID=cds-WJH09344.1;Parent=gene-PUW31_03540;Dbxref=NCBI_GP:WJH09344.1;Name=WJH09344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459684.1;locus_tag=PUW31_03540;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WJH09344.1;transl_table=11 CP118128.1 Genbank gene 752420 753739 . - . ID=gene-PUW31_03545;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=PUW31_03545 CP118128.1 Protein Homology CDS 752420 753739 . - 0 ID=cds-WJH09345.1;Parent=gene-PUW31_03545;Dbxref=NCBI_GP:WJH09345.1;Name=WJH09345.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459685.1;locus_tag=PUW31_03545;product=putrescine-ornithine antiporter;protein_id=WJH09345.1;transl_table=11 CP118128.1 Genbank gene 753736 755934 . - . ID=gene-PUW31_03550;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=PUW31_03550 CP118128.1 Protein Homology CDS 753736 755934 . - 0 ID=cds-WJH09346.1;Parent=gene-PUW31_03550;Dbxref=NCBI_GP:WJH09346.1;Name=WJH09346.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459686.1;locus_tag=PUW31_03550;product=ornithine decarboxylase SpeF;protein_id=WJH09346.1;transl_table=11 CP118128.1 Genbank gene 756314 756418 . - . ID=gene-PUW31_03555;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=PUW31_03555 CP118128.1 Protein Homology CDS 756314 756418 . - 0 ID=cds-WJH09347.1;Parent=gene-PUW31_03555;Dbxref=NCBI_GP:WJH09347.1;Name=WJH09347.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=PUW31_03555;product=leader peptide SpeFL;protein_id=WJH09347.1;transl_table=11 CP118128.1 Genbank gene 756694 757371 . - . ID=gene-PUW31_03560;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=PUW31_03560 CP118128.1 Protein Homology CDS 756694 757371 . - 0 ID=cds-WJH09348.1;Parent=gene-PUW31_03560;Dbxref=NCBI_GP:WJH09348.1;Name=WJH09348.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459687.1;locus_tag=PUW31_03560;product=two-component system response regulator KdpE;protein_id=WJH09348.1;transl_table=11 CP118128.1 Genbank pseudogene 757368 760068 . - . ID=gene-PUW31_03565;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=pseudogene;locus_tag=PUW31_03565;pseudo=true CP118128.1 Protein Homology CDS 757368 760068 . - 0 ID=cds-PUW31_03565;Parent=gene-PUW31_03565;Note=frameshifted;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459688.1;locus_tag=PUW31_03565;product=two-component system sensor histidine kinase KdpD;pseudo=true;transl_table=11 CP118128.1 Genbank gene 760065 760649 . - . ID=gene-PUW31_03570;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=PUW31_03570 CP118128.1 Protein Homology CDS 760065 760649 . - 0 ID=cds-WJH10652.1;Parent=gene-PUW31_03570;Dbxref=NCBI_GP:WJH10652.1;Name=WJH10652.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459689.1;locus_tag=PUW31_03570;product=potassium-transporting ATPase subunit KdpC;protein_id=WJH10652.1;transl_table=11 CP118128.1 Genbank gene 760658 762715 . - . ID=gene-PUW31_03575;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=PUW31_03575 CP118128.1 Protein Homology CDS 760658 762715 . - 0 ID=cds-WJH09349.1;Parent=gene-PUW31_03575;Dbxref=NCBI_GP:WJH09349.1;Name=WJH09349.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpB;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000088017.1;locus_tag=PUW31_03575;product=potassium-transporting ATPase subunit KdpB;protein_id=WJH09349.1;transl_table=11 CP118128.1 Genbank gene 762736 764415 . - . ID=gene-PUW31_03580;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=PUW31_03580 CP118128.1 Protein Homology CDS 762736 764415 . - 0 ID=cds-WJH09350.1;Parent=gene-PUW31_03580;Dbxref=NCBI_GP:WJH09350.1;Name=WJH09350.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459691.1;locus_tag=PUW31_03580;product=potassium-transporting ATPase subunit KdpA;protein_id=WJH09350.1;transl_table=11 CP118128.1 Genbank gene 764415 764504 . - . ID=gene-PUW31_03585;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=PUW31_03585 CP118128.1 Protein Homology CDS 764415 764504 . - 0 ID=cds-WJH09351.1;Parent=gene-PUW31_03585;Dbxref=NCBI_GP:WJH09351.1;Name=WJH09351.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459692.1;locus_tag=PUW31_03585;product=K(+)-transporting ATPase subunit F;protein_id=WJH09351.1;transl_table=11 CP118128.1 Genbank gene 764841 765047 . + . ID=gene-PUW31_03590;Name=PUW31_03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03590 CP118128.1 Protein Homology CDS 764841 765047 . + 0 ID=cds-WJH09352.1;Parent=gene-PUW31_03590;Dbxref=NCBI_GP:WJH09352.1;Name=WJH09352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459693.1;locus_tag=PUW31_03590;product=YbfA family protein;protein_id=WJH09352.1;transl_table=11 CP118128.1 Genbank gene 765159 766580 . + . ID=gene-PUW31_03595;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=PUW31_03595 CP118128.1 Protein Homology CDS 765159 766580 . + 0 ID=cds-WJH09353.1;Parent=gene-PUW31_03595;Dbxref=NCBI_GP:WJH09353.1;Name=WJH09353.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459694.1;locus_tag=PUW31_03595;product=deoxyribodipyrimidine photo-lyase;protein_id=WJH09353.1;transl_table=11 CP118128.1 Genbank gene 766618 768099 . - . ID=gene-PUW31_03600;Name=PUW31_03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03600 CP118128.1 Protein Homology CDS 766618 768099 . - 0 ID=cds-WJH09354.1;Parent=gene-PUW31_03600;Dbxref=NCBI_GP:WJH09354.1;Name=WJH09354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459695.1;locus_tag=PUW31_03600;product=MFS transporter;protein_id=WJH09354.1;transl_table=11 CP118128.1 Genbank gene 768427 769170 . + . ID=gene-PUW31_03605;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=PUW31_03605 CP118128.1 Protein Homology CDS 768427 769170 . + 0 ID=cds-WJH10653.1;Parent=gene-PUW31_03605;Dbxref=NCBI_GP:WJH10653.1;Name=WJH10653.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=PUW31_03605;product=radiation resistance protein YbgI;protein_id=WJH10653.1;transl_table=11 CP118128.1 Genbank gene 769186 769842 . + . ID=gene-PUW31_03610;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=PUW31_03610 CP118128.1 Protein Homology CDS 769186 769842 . + 0 ID=cds-WJH09355.1;Parent=gene-PUW31_03610;Dbxref=NCBI_GP:WJH09355.1;Name=WJH09355.1;gbkey=CDS;gene=pxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459697.1;locus_tag=PUW31_03610;product=5-oxoprolinase subunit PxpB;protein_id=WJH09355.1;transl_table=11 CP118128.1 Genbank gene 769836 770768 . + . ID=gene-PUW31_03615;Name=PUW31_03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03615 CP118128.1 Protein Homology CDS 769836 770768 . + 0 ID=cds-WJH09356.1;Parent=gene-PUW31_03615;Dbxref=NCBI_GP:WJH09356.1;Name=WJH09356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459698.1;locus_tag=PUW31_03615;product=biotin-dependent carboxyltransferase family protein;protein_id=WJH09356.1;transl_table=11 CP118128.1 Genbank gene 770758 771492 . + . ID=gene-PUW31_03620;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=PUW31_03620 CP118128.1 Protein Homology CDS 770758 771492 . + 0 ID=cds-WJH09357.1;Parent=gene-PUW31_03620;Dbxref=NCBI_GP:WJH09357.1;Name=WJH09357.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459699.1;locus_tag=PUW31_03620;product=5-oxoprolinase subunit PxpA;protein_id=WJH09357.1;transl_table=11 CP118128.1 Genbank gene 771614 772405 . + . ID=gene-PUW31_03625;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=PUW31_03625 CP118128.1 Protein Homology CDS 771614 772405 . + 0 ID=cds-WJH09358.1;Parent=gene-PUW31_03625;Dbxref=NCBI_GP:WJH09358.1;Name=WJH09358.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459713.1;locus_tag=PUW31_03625;product=endonuclease VIII;protein_id=WJH09358.1;transl_table=11 CP118128.1 Genbank gene 772460 773506 . - . ID=gene-PUW31_03630;Name=PUW31_03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03630 CP118128.1 Protein Homology CDS 772460 773506 . - 0 ID=cds-WJH09359.1;Parent=gene-PUW31_03630;Dbxref=NCBI_GP:WJH09359.1;Name=WJH09359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459714.1;locus_tag=PUW31_03630;product=AbrB family transcriptional regulator;protein_id=WJH09359.1;transl_table=11 CP118128.1 Genbank pseudogene 773642 774924 . - . ID=gene-PUW31_03635;Name=PUW31_03635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_03635;pseudo=true CP118128.1 Protein Homology CDS 773642 774924 . - 0 ID=cds-PUW31_03635;Parent=gene-PUW31_03635;Note=frameshifted;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459715.1;locus_tag=PUW31_03635;product=citrate synthase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 775025 775270 . + . ID=gene-PUW31_03640;Name=PUW31_03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03640 CP118128.1 GeneMarkS-2+ CDS 775025 775270 . + 0 ID=cds-WJH09360.1;Parent=gene-PUW31_03640;Dbxref=NCBI_GP:WJH09360.1;Name=WJH09360.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_03640;product=hypothetical protein;protein_id=WJH09360.1;transl_table=11 CP118128.1 Genbank gene 775664 776068 . + . ID=gene-PUW31_03645;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=PUW31_03645 CP118128.1 Protein Homology CDS 775664 776068 . + 0 ID=cds-WJH09361.1;Parent=gene-PUW31_03645;Dbxref=NCBI_GP:WJH09361.1;Name=WJH09361.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045281;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,succinate dehydrogenase complex|0045281||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=PUW31_03645;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WJH09361.1;transl_table=11 CP118128.1 Genbank gene 776062 776409 . + . ID=gene-PUW31_03650;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=PUW31_03650 CP118128.1 Protein Homology CDS 776062 776409 . + 0 ID=cds-WJH09362.1;Parent=gene-PUW31_03650;Dbxref=NCBI_GP:WJH09362.1;Name=WJH09362.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1;locus_tag=PUW31_03650;product=succinate dehydrogenase membrane anchor subunit;protein_id=WJH09362.1;transl_table=11 CP118128.1 Genbank gene 776409 778175 . + . ID=gene-PUW31_03655;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=PUW31_03655 CP118128.1 Protein Homology CDS 776409 778175 . + 0 ID=cds-WJH09363.1;Parent=gene-PUW31_03655;Dbxref=NCBI_GP:WJH09363.1;Name=WJH09363.1;Ontology_term=GO:0006099,GO:0022900,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=PUW31_03655;product=succinate dehydrogenase flavoprotein subunit;protein_id=WJH09363.1;transl_table=11 CP118128.1 Genbank gene 778192 778908 . + . ID=gene-PUW31_03660;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=PUW31_03660 CP118128.1 Protein Homology CDS 778192 778908 . + 0 ID=cds-WJH10654.1;Parent=gene-PUW31_03660;Dbxref=NCBI_GP:WJH10654.1;Name=WJH10654.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=PUW31_03660;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WJH10654.1;transl_table=11 CP118128.1 Genbank gene 779432 782233 . + . ID=gene-PUW31_03665;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=PUW31_03665 CP118128.1 Protein Homology CDS 779432 782233 . + 0 ID=cds-WJH09364.1;Parent=gene-PUW31_03665;Dbxref=NCBI_GP:WJH09364.1;Name=WJH09364.1;Ontology_term=GO:0006099,GO:0006554,GO:0006568,GO:0004591,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,lysine catabolic process|0006554||IEA,tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459721.1;locus_tag=PUW31_03665;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WJH09364.1;transl_table=11 CP118128.1 Genbank gene 782248 783456 . + . ID=gene-PUW31_03670;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=PUW31_03670 CP118128.1 Protein Homology CDS 782248 783456 . + 0 ID=cds-WJH09365.1;Parent=gene-PUW31_03670;Dbxref=NCBI_GP:WJH09365.1;Name=WJH09365.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459722.1;locus_tag=PUW31_03670;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WJH09365.1;transl_table=11 CP118128.1 Genbank pseudogene 783598 784763 . + . ID=gene-PUW31_03675;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=pseudogene;locus_tag=PUW31_03675;pseudo=true CP118128.1 Protein Homology CDS 783598 784763 . + 0 ID=cds-PUW31_03675;Parent=gene-PUW31_03675;Note=frameshifted;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=PUW31_03675;product=ADP-forming succinate--CoA ligase subunit beta;pseudo=true;transl_table=11 CP118128.1 Genbank gene 784763 785632 . + . ID=gene-PUW31_03680;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=PUW31_03680 CP118128.1 Protein Homology CDS 784763 785632 . + 0 ID=cds-WJH09366.1;Parent=gene-PUW31_03680;Dbxref=NCBI_GP:WJH09366.1;Name=WJH09366.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459724.1;locus_tag=PUW31_03680;product=succinate--CoA ligase subunit alpha;protein_id=WJH09366.1;transl_table=11 CP118128.1 Genbank gene 787215 788783 . + . ID=gene-PUW31_03685;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=PUW31_03685 CP118128.1 Protein Homology CDS 787215 788783 . + 0 ID=cds-WJH10655.1;Parent=gene-PUW31_03685;Dbxref=NCBI_GP:WJH10655.1;Name=WJH10655.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459725.1;locus_tag=PUW31_03685;product=cytochrome ubiquinol oxidase subunit I;protein_id=WJH10655.1;transl_table=11 CP118128.1 Genbank gene 788799 789938 . + . ID=gene-PUW31_03690;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=PUW31_03690 CP118128.1 Protein Homology CDS 788799 789938 . + 0 ID=cds-WJH09367.1;Parent=gene-PUW31_03690;Dbxref=NCBI_GP:WJH09367.1;Name=WJH09367.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=PUW31_03690;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WJH09367.1;transl_table=11 CP118128.1 Genbank gene 789953 790066 . + . ID=gene-PUW31_03695;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=PUW31_03695 CP118128.1 Protein Homology CDS 789953 790066 . + 0 ID=cds-WJH09368.1;Parent=gene-PUW31_03695;Dbxref=NCBI_GP:WJH09368.1;Name=WJH09368.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459727.1;locus_tag=PUW31_03695;product=cytochrome bd-I oxidase subunit CydX;protein_id=WJH09368.1;transl_table=11 CP118128.1 Genbank pseudogene 790066 790358 . + . ID=gene-PUW31_03700;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=pseudogene;locus_tag=PUW31_03700;pseudo=true CP118128.1 Protein Homology CDS 790066 790358 . + 0 ID=cds-PUW31_03700;Parent=gene-PUW31_03700;Note=frameshifted;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006712473.1;locus_tag=PUW31_03700;product=cyd operon protein YbgE;pseudo=true;transl_table=11 CP118128.1 Genbank gene 790587 790991 . + . ID=gene-PUW31_03705;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=PUW31_03705 CP118128.1 Protein Homology CDS 790587 790991 . + 0 ID=cds-WJH09369.1;Parent=gene-PUW31_03705;Dbxref=NCBI_GP:WJH09369.1;Name=WJH09369.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459729.1;locus_tag=PUW31_03705;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WJH09369.1;transl_table=11 CP118128.1 Genbank gene 790988 791680 . + . ID=gene-PUW31_03710;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=PUW31_03710 CP118128.1 Protein Homology CDS 790988 791680 . + 0 ID=cds-WJH09370.1;Parent=gene-PUW31_03710;Dbxref=NCBI_GP:WJH09370.1;Name=WJH09370.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459730.1;locus_tag=PUW31_03710;product=Tol-Pal system protein TolQ;protein_id=WJH09370.1;transl_table=11 CP118128.1 Genbank gene 791684 792112 . + . ID=gene-PUW31_03715;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=PUW31_03715 CP118128.1 Protein Homology CDS 791684 792112 . + 0 ID=cds-WJH09371.1;Parent=gene-PUW31_03715;Dbxref=NCBI_GP:WJH09371.1;Name=WJH09371.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=PUW31_03715;product=colicin uptake protein TolR;protein_id=WJH09371.1;transl_table=11 CP118128.1 Genbank pseudogene 792177 793486 . + . ID=gene-PUW31_03720;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=pseudogene;locus_tag=PUW31_03720;pseudo=true CP118128.1 Protein Homology CDS 792177 793486 . + 0 ID=cds-PUW31_03720;Parent=gene-PUW31_03720;Note=frameshifted;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459732.1;locus_tag=PUW31_03720;product=cell envelope integrity protein TolA;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 793610 794901 . + . ID=gene-PUW31_03725;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=pseudogene;locus_tag=PUW31_03725;pseudo=true CP118128.1 Protein Homology CDS 793610 794901 . + 0 ID=cds-PUW31_03725;Parent=gene-PUW31_03725;Note=frameshifted;Ontology_term=GO:0006810,GO:0005215,GO:0030288;gbkey=CDS;gene=tolB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=PUW31_03725;product=Tol-Pal system beta propeller repeat protein TolB;pseudo=true;transl_table=11 CP118128.1 Genbank gene 794936 795460 . + . ID=gene-PUW31_03730;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=PUW31_03730 CP118128.1 Protein Homology CDS 794936 795460 . + 0 ID=cds-WJH09372.1;Parent=gene-PUW31_03730;Dbxref=NCBI_GP:WJH09372.1;Name=WJH09372.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459734.1;locus_tag=PUW31_03730;product=peptidoglycan-associated lipoprotein Pal;protein_id=WJH09372.1;transl_table=11 CP118128.1 Genbank gene 795470 796258 . + . ID=gene-PUW31_03735;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=PUW31_03735 CP118128.1 Protein Homology CDS 795470 796258 . + 0 ID=cds-WJH09373.1;Parent=gene-PUW31_03735;Dbxref=NCBI_GP:WJH09373.1;Name=WJH09373.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459735.1;locus_tag=PUW31_03735;product=cell division protein CpoB;protein_id=WJH09373.1;transl_table=11 CP118128.1 Genbank gene 796423 796498 . + . ID=gene-PUW31_03740;Name=PUW31_03740;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_03740 CP118128.1 tRNAscan-SE tRNA 796423 796498 . + . ID=rna-PUW31_03740;Parent=gene-PUW31_03740;anticodon=(pos:796456..796458);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_03740;product=tRNA-Lys CP118128.1 tRNAscan-SE exon 796423 796498 . + . ID=exon-PUW31_03740-1;Parent=rna-PUW31_03740;anticodon=(pos:796456..796458);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_03740;product=tRNA-Lys CP118128.1 Genbank gene 796635 796710 . + . ID=gene-PUW31_03745;Name=PUW31_03745;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_03745 CP118128.1 tRNAscan-SE tRNA 796635 796710 . + . ID=rna-PUW31_03745;Parent=gene-PUW31_03745;anticodon=(pos:796668..796670);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_03745;product=tRNA-Val CP118128.1 tRNAscan-SE exon 796635 796710 . + . ID=exon-PUW31_03745-1;Parent=rna-PUW31_03745;anticodon=(pos:796668..796670);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_03745;product=tRNA-Val CP118128.1 Genbank gene 796714 796789 . + . ID=gene-PUW31_03750;Name=PUW31_03750;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_03750 CP118128.1 tRNAscan-SE tRNA 796714 796789 . + . ID=rna-PUW31_03750;Parent=gene-PUW31_03750;anticodon=(pos:796747..796749);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_03750;product=tRNA-Lys CP118128.1 tRNAscan-SE exon 796714 796789 . + . ID=exon-PUW31_03750-1;Parent=rna-PUW31_03750;anticodon=(pos:796747..796749);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_03750;product=tRNA-Lys CP118128.1 Genbank gene 797208 798251 . + . ID=gene-PUW31_03755;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=PUW31_03755 CP118128.1 Protein Homology CDS 797208 798251 . + 0 ID=cds-WJH09374.1;Parent=gene-PUW31_03755;Dbxref=NCBI_GP:WJH09374.1;Name=WJH09374.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459736.1;locus_tag=PUW31_03755;product=quinolinate synthase NadA;protein_id=WJH09374.1;transl_table=11 CP118128.1 Genbank gene 798276 798995 . + . ID=gene-PUW31_03760;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=PUW31_03760 CP118128.1 Protein Homology CDS 798276 798995 . + 0 ID=cds-WJH09375.1;Parent=gene-PUW31_03760;Dbxref=NCBI_GP:WJH09375.1;Name=WJH09375.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459737.1;locus_tag=PUW31_03760;product=nicotinamide riboside transporter PnuC;protein_id=WJH09375.1;transl_table=11 CP118128.1 Genbank gene 798992 799930 . - . ID=gene-PUW31_03765;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=PUW31_03765 CP118128.1 Protein Homology CDS 798992 799930 . - 0 ID=cds-WJH09376.1;Parent=gene-PUW31_03765;Dbxref=NCBI_GP:WJH09376.1;Name=WJH09376.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459738.1;locus_tag=PUW31_03765;product=CDF family zinc transporter ZitB;protein_id=WJH09376.1;transl_table=11 CP118128.1 Genbank gene 800041 800427 . - . ID=gene-PUW31_03770;Name=PUW31_03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03770 CP118128.1 Protein Homology CDS 800041 800427 . - 0 ID=cds-WJH09377.1;Parent=gene-PUW31_03770;Dbxref=NCBI_GP:WJH09377.1;Name=WJH09377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459739.1;locus_tag=PUW31_03770;product=YbgS-like family protein;protein_id=WJH09377.1;transl_table=11 CP118128.1 Genbank pseudogene 800747 801798 . + . ID=gene-PUW31_03775;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=pseudogene;locus_tag=PUW31_03775;pseudo=true CP118128.1 Protein Homology CDS 800747 801798 . + 0 ID=cds-PUW31_03775;Parent=gene-PUW31_03775;Note=frameshifted;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=PUW31_03775;product=3-deoxy-7-phosphoheptulonate synthase AroG;pseudo=true;transl_table=11 CP118128.1 Genbank gene 801892 802437 . - . ID=gene-PUW31_03780;Name=PUW31_03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03780 CP118128.1 Protein Homology CDS 801892 802437 . - 0 ID=cds-WJH09378.1;Parent=gene-PUW31_03780;Dbxref=NCBI_GP:WJH09378.1;Name=WJH09378.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459741.1;locus_tag=PUW31_03780;product=FumA C-terminus/TtdB family hydratase beta subunit;protein_id=WJH09378.1;transl_table=11 CP118128.1 Genbank gene 802452 803297 . - . ID=gene-PUW31_03785;Name=PUW31_03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03785 CP118128.1 Protein Homology CDS 802452 803297 . - 0 ID=cds-WJH09379.1;Parent=gene-PUW31_03785;Dbxref=NCBI_GP:WJH09379.1;Name=WJH09379.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459742.1;locus_tag=PUW31_03785;product=fumarate hydratase;protein_id=WJH09379.1;transl_table=11 CP118128.1 Genbank pseudogene 803427 804316 . + . ID=gene-PUW31_03790;Name=PUW31_03790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_03790;pseudo=true CP118128.1 Protein Homology CDS 803427 804316 . + 0 ID=cds-PUW31_03790;Parent=gene-PUW31_03790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539513.1;locus_tag=PUW31_03790;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 CP118128.1 Genbank gene 804317 805300 . - . ID=gene-PUW31_03795;Name=PUW31_03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03795 CP118128.1 Protein Homology CDS 804317 805300 . - 0 ID=cds-WJH09380.1;Parent=gene-PUW31_03795;Dbxref=NCBI_GP:WJH09380.1;Name=WJH09380.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459744.1;locus_tag=PUW31_03795;product=LysR family transcriptional regulator;protein_id=WJH09380.1;transl_table=11 CP118128.1 Genbank gene 805523 806791 . + . ID=gene-PUW31_03800;Name=PUW31_03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03800 CP118128.1 Protein Homology CDS 805523 806791 . + 0 ID=cds-WJH09381.1;Parent=gene-PUW31_03800;Dbxref=NCBI_GP:WJH09381.1;Name=WJH09381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074132.1;locus_tag=PUW31_03800;product=SLC13 family permease;protein_id=WJH09381.1;transl_table=11 CP118128.1 Genbank gene 806841 807080 . + . ID=gene-PUW31_03805;Name=PUW31_03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03805 CP118128.1 Protein Homology CDS 806841 807080 . + 0 ID=cds-WJH09382.1;Parent=gene-PUW31_03805;Dbxref=NCBI_GP:WJH09382.1;Name=WJH09382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459061.1;locus_tag=PUW31_03805;product=oxaloacetate decarboxylase subunit gamma;protein_id=WJH09382.1;transl_table=11 CP118128.1 Genbank gene 807097 808869 . + . ID=gene-PUW31_03810;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=PUW31_03810 CP118128.1 Protein Homology CDS 807097 808869 . + 0 ID=cds-WJH09383.1;Parent=gene-PUW31_03810;Dbxref=NCBI_GP:WJH09383.1;Name=WJH09383.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=PUW31_03810;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WJH09383.1;transl_table=11 CP118128.1 Genbank pseudogene 808882 810155 . + . ID=gene-PUW31_03815;Name=PUW31_03815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_03815;pseudo=true CP118128.1 Protein Homology CDS 808882 810155 . + 0 ID=cds-PUW31_03815;Parent=gene-PUW31_03815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=PUW31_03815;product=oxalacetate decarboxylase subunit beta;pseudo=true;transl_table=11 CP118128.1 Genbank gene 810274 810972 . + . ID=gene-PUW31_03820;Name=PUW31_03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03820 CP118128.1 Protein Homology CDS 810274 810972 . + 0 ID=cds-WJH09384.1;Parent=gene-PUW31_03820;Dbxref=NCBI_GP:WJH09384.1;Name=WJH09384.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459748.1;locus_tag=PUW31_03820;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WJH09384.1;transl_table=11 CP118128.1 Genbank gene 811352 812431 . + . ID=gene-PUW31_03825;Name=PUW31_03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03825 CP118128.1 Protein Homology CDS 811352 812431 . + 0 ID=cds-WJH09385.1;Parent=gene-PUW31_03825;Dbxref=NCBI_GP:WJH09385.1;Name=WJH09385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459749.1;locus_tag=PUW31_03825;product=iron ABC transporter permease;protein_id=WJH09385.1;transl_table=11 CP118128.1 Genbank gene 812431 813207 . + . ID=gene-PUW31_03830;Name=PUW31_03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03830 CP118128.1 Protein Homology CDS 812431 813207 . + 0 ID=cds-WJH09386.1;Parent=gene-PUW31_03830;Dbxref=NCBI_GP:WJH09386.1;Name=WJH09386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459750.1;locus_tag=PUW31_03830;product=ABC transporter ATP-binding protein;protein_id=WJH09386.1;transl_table=11 CP118128.1 Genbank gene 813298 814050 . - . ID=gene-PUW31_03835;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=PUW31_03835 CP118128.1 Protein Homology CDS 813298 814050 . - 0 ID=cds-WJH09387.1;Parent=gene-PUW31_03835;Dbxref=NCBI_GP:WJH09387.1;Name=WJH09387.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=PUW31_03835;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WJH09387.1;transl_table=11 CP118128.1 Genbank gene 814274 815314 . - . ID=gene-PUW31_03840;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=PUW31_03840 CP118128.1 Protein Homology CDS 814274 815314 . - 0 ID=cds-WJH09388.1;Parent=gene-PUW31_03840;Dbxref=NCBI_GP:WJH09388.1;Name=WJH09388.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459752.1;locus_tag=PUW31_03840;product=galactose-1-epimerase;protein_id=WJH09388.1;transl_table=11 CP118128.1 Genbank gene 815308 816456 . - . ID=gene-PUW31_03845;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=PUW31_03845 CP118128.1 Protein Homology CDS 815308 816456 . - 0 ID=cds-WJH09389.1;Parent=gene-PUW31_03845;Dbxref=NCBI_GP:WJH09389.1;Name=WJH09389.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=PUW31_03845;product=galactokinase;protein_id=WJH09389.1;transl_table=11 CP118128.1 Genbank pseudogene 816459 817504 . - . ID=gene-PUW31_03850;Name=galT;gbkey=Gene;gene=galT;gene_biotype=pseudogene;locus_tag=PUW31_03850;pseudo=true CP118128.1 Protein Homology CDS 816459 817504 . - 0 ID=cds-PUW31_03850;Parent=gene-PUW31_03850;Note=frameshifted;Ontology_term=GO:0006012,GO:0008108;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459754.1;locus_tag=PUW31_03850;product=galactose-1-phosphate uridylyltransferase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 817515 818531 . - . ID=gene-PUW31_03855;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=PUW31_03855 CP118128.1 Protein Homology CDS 817515 818531 . - 0 ID=cds-WJH09390.1;Parent=gene-PUW31_03855;Dbxref=NCBI_GP:WJH09390.1;Name=WJH09390.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459755.1;locus_tag=PUW31_03855;product=UDP-glucose 4-epimerase GalE;protein_id=WJH09390.1;transl_table=11 CP118128.1 Genbank gene 818754 819662 . - . ID=gene-PUW31_03860;Name=PUW31_03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03860 CP118128.1 Protein Homology CDS 818754 819662 . - 0 ID=cds-WJH09391.1;Parent=gene-PUW31_03860;Dbxref=NCBI_GP:WJH09391.1;Name=WJH09391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459756.1;locus_tag=PUW31_03860;product=DUF2167 domain-containing protein;protein_id=WJH09391.1;transl_table=11 CP118128.1 Genbank pseudogene 819833 821307 . - . ID=gene-PUW31_03865;Name=modF;gbkey=Gene;gene=modF;gene_biotype=pseudogene;locus_tag=PUW31_03865;pseudo=true CP118128.1 Protein Homology CDS 819833 821307 . - 0 ID=cds-PUW31_03865;Parent=gene-PUW31_03865;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459757.1;locus_tag=PUW31_03865;product=molybdate ABC transporter ATP-binding protein ModF;pseudo=true;transl_table=11 CP118128.1 Genbank gene 821375 822163 . - . ID=gene-PUW31_03870;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=PUW31_03870 CP118128.1 Protein Homology CDS 821375 822163 . - 0 ID=cds-WJH09392.1;Parent=gene-PUW31_03870;Dbxref=NCBI_GP:WJH09392.1;Name=WJH09392.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459758.1;locus_tag=PUW31_03870;product=molybdenum-dependent transcriptional regulator;protein_id=WJH09392.1;transl_table=11 CP118128.1 Genbank gene 822292 822441 . + . ID=gene-PUW31_03875;Name=PUW31_03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03875 CP118128.1 Protein Homology CDS 822292 822441 . + 0 ID=cds-WJH09393.1;Parent=gene-PUW31_03875;Dbxref=NCBI_GP:WJH09393.1;Name=WJH09393.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459759.1;locus_tag=PUW31_03875;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WJH09393.1;transl_table=11 CP118128.1 Genbank gene 822608 823381 . + . ID=gene-PUW31_03880;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=PUW31_03880 CP118128.1 Protein Homology CDS 822608 823381 . + 0 ID=cds-WJH09394.1;Parent=gene-PUW31_03880;Dbxref=NCBI_GP:WJH09394.1;Name=WJH09394.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459760.1;locus_tag=PUW31_03880;product=molybdate ABC transporter substrate-binding protein;protein_id=WJH09394.1;transl_table=11 CP118128.1 Genbank gene 823381 824070 . + . ID=gene-PUW31_03885;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=PUW31_03885 CP118128.1 Protein Homology CDS 823381 824070 . + 0 ID=cds-WJH09395.1;Parent=gene-PUW31_03885;Dbxref=NCBI_GP:WJH09395.1;Name=WJH09395.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459761.1;locus_tag=PUW31_03885;product=molybdate ABC transporter permease subunit;protein_id=WJH09395.1;transl_table=11 CP118128.1 Genbank gene 824073 825131 . + . ID=gene-PUW31_03890;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=PUW31_03890 CP118128.1 Protein Homology CDS 824073 825131 . + 0 ID=cds-WJH09396.1;Parent=gene-PUW31_03890;Dbxref=NCBI_GP:WJH09396.1;Name=WJH09396.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459762.1;locus_tag=PUW31_03890;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WJH09396.1;transl_table=11 CP118128.1 Genbank gene 825132 825950 . - . ID=gene-PUW31_03895;Name=PUW31_03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03895 CP118128.1 Protein Homology CDS 825132 825950 . - 0 ID=cds-WJH09397.1;Parent=gene-PUW31_03895;Dbxref=NCBI_GP:WJH09397.1;Name=WJH09397.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459763.1;locus_tag=PUW31_03895;product=pyridoxal phosphatase;protein_id=WJH09397.1;transl_table=11 CP118128.1 Genbank gene 826114 827109 . + . ID=gene-PUW31_03900;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=PUW31_03900 CP118128.1 Protein Homology CDS 826114 827109 . + 0 ID=cds-WJH09398.1;Parent=gene-PUW31_03900;Dbxref=NCBI_GP:WJH09398.1;Name=WJH09398.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459764.1;locus_tag=PUW31_03900;product=6-phosphogluconolactonase;protein_id=WJH09398.1;transl_table=11 CP118128.1 Genbank gene 827253 828569 . - . ID=gene-PUW31_03905;Name=PUW31_03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03905 CP118128.1 Protein Homology CDS 827253 828569 . - 0 ID=cds-WJH09399.1;Parent=gene-PUW31_03905;Dbxref=NCBI_GP:WJH09399.1;Name=WJH09399.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459765.1;locus_tag=PUW31_03905;product=putative acyl-CoA thioester hydrolase;protein_id=WJH09399.1;transl_table=11 CP118128.1 Genbank gene 828807 830030 . + . ID=gene-PUW31_03910;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=PUW31_03910 CP118128.1 Protein Homology CDS 828807 830030 . + 0 ID=cds-WJH10656.1;Parent=gene-PUW31_03910;Dbxref=NCBI_GP:WJH10656.1;Name=WJH10656.1;Ontology_term=GO:0006548,GO:0050480;gbkey=CDS;gene=hutI;go_function=imidazolonepropionase activity|0050480||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459766.1;locus_tag=PUW31_03910;product=imidazolonepropionase;protein_id=WJH10656.1;transl_table=11 CP118128.1 Genbank gene 830027 830968 . + . ID=gene-PUW31_03915;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=PUW31_03915 CP118128.1 Protein Homology CDS 830027 830968 . + 0 ID=cds-WJH09400.1;Parent=gene-PUW31_03915;Dbxref=NCBI_GP:WJH09400.1;Name=WJH09400.1;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459767.1;locus_tag=PUW31_03915;product=formimidoylglutamase;protein_id=WJH09400.1;transl_table=11 CP118128.1 Genbank gene 831013 831738 . + . ID=gene-PUW31_03920;Name=PUW31_03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03920 CP118128.1 Protein Homology CDS 831013 831738 . + 0 ID=cds-WJH09401.1;Parent=gene-PUW31_03920;Dbxref=NCBI_GP:WJH09401.1;Name=WJH09401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459768.1;locus_tag=PUW31_03920;product=histidine utilization repressor;protein_id=WJH09401.1;transl_table=11 CP118128.1 Genbank gene 831935 833620 . + . ID=gene-PUW31_03925;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=PUW31_03925 CP118128.1 Protein Homology CDS 831935 833620 . + 0 ID=cds-WJH09402.1;Parent=gene-PUW31_03925;Dbxref=NCBI_GP:WJH09402.1;Name=WJH09402.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441920.1;locus_tag=PUW31_03925;product=urocanate hydratase;protein_id=WJH09402.1;transl_table=11 CP118128.1 Genbank gene 833622 835142 . + . ID=gene-PUW31_03930;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=PUW31_03930 CP118128.1 Protein Homology CDS 833622 835142 . + 0 ID=cds-WJH09403.1;Parent=gene-PUW31_03930;Dbxref=NCBI_GP:WJH09403.1;Name=WJH09403.1;Ontology_term=GO:0006548,GO:0004397;gbkey=CDS;gene=hutH;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459769.1;locus_tag=PUW31_03930;product=histidine ammonia-lyase;protein_id=WJH09403.1;transl_table=11 CP118128.1 Genbank gene 835227 835703 . - . ID=gene-PUW31_03935;Name=PUW31_03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03935 CP118128.1 Protein Homology CDS 835227 835703 . - 0 ID=cds-WJH09404.1;Parent=gene-PUW31_03935;Dbxref=NCBI_GP:WJH09404.1;Name=WJH09404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459770.1;locus_tag=PUW31_03935;product=kinase inhibitor;protein_id=WJH09404.1;transl_table=11 CP118128.1 Genbank gene 835761 837050 . - . ID=gene-PUW31_03940;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=PUW31_03940 CP118128.1 Protein Homology CDS 835761 837050 . - 0 ID=cds-WJH09405.1;Parent=gene-PUW31_03940;Dbxref=NCBI_GP:WJH09405.1;Name=WJH09405.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459771.1;locus_tag=PUW31_03940;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WJH09405.1;transl_table=11 CP118128.1 Genbank gene 837137 838177 . + . ID=gene-PUW31_03945;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=PUW31_03945 CP118128.1 Protein Homology CDS 837137 838177 . + 0 ID=cds-WJH09406.1;Parent=gene-PUW31_03945;Dbxref=NCBI_GP:WJH09406.1;Name=WJH09406.1;Ontology_term=GO:0009102,GO:0004076,GO:0051537,GO:0051539,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459772.1;locus_tag=PUW31_03945;product=biotin synthase BioB;protein_id=WJH09406.1;transl_table=11 CP118128.1 Genbank gene 838174 839331 . + . ID=gene-PUW31_03950;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=PUW31_03950 CP118128.1 Protein Homology CDS 838174 839331 . + 0 ID=cds-WJH09407.1;Parent=gene-PUW31_03950;Dbxref=NCBI_GP:WJH09407.1;Name=WJH09407.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459773.1;locus_tag=PUW31_03950;product=8-amino-7-oxononanoate synthase;protein_id=WJH09407.1;transl_table=11 CP118128.1 Genbank gene 839315 840070 . + . ID=gene-PUW31_03955;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=PUW31_03955 CP118128.1 Protein Homology CDS 839315 840070 . + 0 ID=cds-WJH09408.1;Parent=gene-PUW31_03955;Dbxref=NCBI_GP:WJH09408.1;Name=WJH09408.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459774.1;locus_tag=PUW31_03955;product=malonyl-ACP O-methyltransferase BioC;protein_id=WJH09408.1;transl_table=11 CP118128.1 Genbank gene 840063 840749 . + . ID=gene-PUW31_03960;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=PUW31_03960 CP118128.1 Protein Homology CDS 840063 840749 . + 0 ID=cds-WJH09409.1;Parent=gene-PUW31_03960;Dbxref=NCBI_GP:WJH09409.1;Name=WJH09409.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459775.1;locus_tag=PUW31_03960;product=dethiobiotin synthase;protein_id=WJH09409.1;transl_table=11 CP118128.1 Genbank gene 841399 843420 . + . ID=gene-PUW31_03965;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=PUW31_03965 CP118128.1 Protein Homology CDS 841399 843420 . + 0 ID=cds-WJH09410.1;Parent=gene-PUW31_03965;Dbxref=NCBI_GP:WJH09410.1;Name=WJH09410.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=PUW31_03965;product=excinuclease ABC subunit UvrB;protein_id=WJH09410.1;transl_table=11 CP118128.1 Genbank gene 843729 843902 . + . ID=gene-PUW31_03970;Name=PUW31_03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_03970 CP118128.1 Protein Homology CDS 843729 843902 . + 0 ID=cds-WJH09411.1;Parent=gene-PUW31_03970;Dbxref=NCBI_GP:WJH09411.1;Name=WJH09411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447236.1;locus_tag=PUW31_03970;product=hypothetical protein;protein_id=WJH09411.1;transl_table=11 CP118128.1 Genbank pseudogene 843910 846178 . + . ID=gene-PUW31_03975;Name=slrP;gbkey=Gene;gene=slrP;gene_biotype=pseudogene;locus_tag=PUW31_03975;pseudo=true CP118128.1 Protein Homology CDS 843910 846178 . + 0 ID=cds-PUW31_03975;Parent=gene-PUW31_03975;Note=frameshifted;gbkey=CDS;gene=slrP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459778.1;locus_tag=PUW31_03975;product=SPI-1 type III secretion system effector E3 ubiquitin transferase SlrP;pseudo=true;transl_table=11 CP118128.1 Genbank gene 846270 847178 . - . ID=gene-PUW31_03980;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=PUW31_03980 CP118128.1 Protein Homology CDS 846270 847178 . - 0 ID=cds-WJH09412.1;Parent=gene-PUW31_03980;Dbxref=NCBI_GP:WJH09412.1;Name=WJH09412.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459779.1;locus_tag=PUW31_03980;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WJH09412.1;transl_table=11 CP118128.1 cmsearch riboswitch 847443 847587 . + . ID=id-CP118128.1:847443..847587;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118128.1 Genbank gene 847575 848564 . + . ID=gene-PUW31_03985;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=PUW31_03985 CP118128.1 Protein Homology CDS 847575 848564 . + 0 ID=cds-WJH09413.1;Parent=gene-PUW31_03985;Dbxref=NCBI_GP:WJH09413.1;Name=WJH09413.1;Ontology_term=GO:0006777,GO:0051539;gbkey=CDS;gene=moaA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459780.1;locus_tag=PUW31_03985;product=GTP 3'%2C8-cyclase MoaA;protein_id=WJH09413.1;transl_table=11 CP118128.1 Genbank gene 848586 849098 . + . ID=gene-PUW31_03990;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=PUW31_03990 CP118128.1 Protein Homology CDS 848586 849098 . + 0 ID=cds-WJH09414.1;Parent=gene-PUW31_03990;Dbxref=NCBI_GP:WJH09414.1;Name=WJH09414.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=PUW31_03990;product=molybdenum cofactor biosynthesis protein B;protein_id=WJH09414.1;transl_table=11 CP118128.1 Genbank gene 849101 849586 . + . ID=gene-PUW31_03995;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=PUW31_03995 CP118128.1 Protein Homology CDS 849101 849586 . + 0 ID=cds-WJH09415.1;Parent=gene-PUW31_03995;Dbxref=NCBI_GP:WJH09415.1;Name=WJH09415.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaC;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459782.1;locus_tag=PUW31_03995;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WJH09415.1;transl_table=11 CP118128.1 Genbank gene 849579 849824 . + . ID=gene-PUW31_04000;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=PUW31_04000 CP118128.1 Protein Homology CDS 849579 849824 . + 0 ID=cds-WJH09416.1;Parent=gene-PUW31_04000;Dbxref=NCBI_GP:WJH09416.1;Name=WJH09416.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308889.1;locus_tag=PUW31_04000;product=molybdopterin synthase sulfur carrier subunit;protein_id=WJH09416.1;transl_table=11 CP118128.1 Genbank gene 849826 850278 . + . ID=gene-PUW31_04005;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=PUW31_04005 CP118128.1 Protein Homology CDS 849826 850278 . + 0 ID=cds-WJH09417.1;Parent=gene-PUW31_04005;Dbxref=NCBI_GP:WJH09417.1;Name=WJH09417.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459784.1;locus_tag=PUW31_04005;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WJH09417.1;transl_table=11 CP118128.1 Genbank gene 850326 851030 . + . ID=gene-PUW31_04010;Name=PUW31_04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04010 CP118128.1 Protein Homology CDS 850326 851030 . + 0 ID=cds-WJH09418.1;Parent=gene-PUW31_04010;Dbxref=NCBI_GP:WJH09418.1;Name=WJH09418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459785.1;locus_tag=PUW31_04010;product=Bax inhibitor-1/YccA family protein;protein_id=WJH09418.1;transl_table=11 CP118128.1 Genbank gene 851175 851882 . + . ID=gene-PUW31_04015;Name=PUW31_04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04015 CP118128.1 Protein Homology CDS 851175 851882 . + 0 ID=cds-WJH09419.1;Parent=gene-PUW31_04015;Dbxref=NCBI_GP:WJH09419.1;Name=WJH09419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459786.1;locus_tag=PUW31_04015;product=Bax inhibitor-1 family protein;protein_id=WJH09419.1;transl_table=11 CP118128.1 Genbank gene 851906 852514 . + . ID=gene-PUW31_04020;Name=PUW31_04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04020 CP118128.1 Protein Homology CDS 851906 852514 . + 0 ID=cds-WJH10657.1;Parent=gene-PUW31_04020;Dbxref=NCBI_GP:WJH10657.1;Name=WJH10657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459787.1;locus_tag=PUW31_04020;product=hypothetical protein;protein_id=WJH10657.1;transl_table=11 CP118128.1 Genbank gene 852522 853082 . + . ID=gene-PUW31_04025;Name=PUW31_04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04025 CP118128.1 Protein Homology CDS 852522 853082 . + 0 ID=cds-WJH09420.1;Parent=gene-PUW31_04025;Dbxref=NCBI_GP:WJH09420.1;Name=WJH09420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459788.1;locus_tag=PUW31_04025;product=hypothetical protein;protein_id=WJH09420.1;transl_table=11 CP118128.1 Genbank gene 853085 854047 . - . ID=gene-PUW31_04030;Name=PUW31_04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04030 CP118128.1 Protein Homology CDS 853085 854047 . - 0 ID=cds-WJH09421.1;Parent=gene-PUW31_04030;Dbxref=NCBI_GP:WJH09421.1;Name=WJH09421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459789.1;locus_tag=PUW31_04030;product=YbhN family protein;protein_id=WJH09421.1;transl_table=11 CP118128.1 Genbank gene 854047 855288 . - . ID=gene-PUW31_04035;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=PUW31_04035 CP118128.1 Protein Homology CDS 854047 855288 . - 0 ID=cds-WJH09422.1;Parent=gene-PUW31_04035;Dbxref=NCBI_GP:WJH09422.1;Name=WJH09422.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459790.1;locus_tag=PUW31_04035;product=cardiolipin synthase ClsB;protein_id=WJH09422.1;transl_table=11 CP118128.1 Genbank gene 855285 856043 . - . ID=gene-PUW31_04040;Name=PUW31_04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04040 CP118128.1 Protein Homology CDS 855285 856043 . - 0 ID=cds-WJH09423.1;Parent=gene-PUW31_04040;Dbxref=NCBI_GP:WJH09423.1;Name=WJH09423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459791.1;locus_tag=PUW31_04040;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WJH09423.1;transl_table=11 CP118128.1 Genbank gene 856176 856586 . + . ID=gene-PUW31_04045;Name=PUW31_04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04045 CP118128.1 Protein Homology CDS 856176 856586 . + 0 ID=cds-WJH09424.1;Parent=gene-PUW31_04045;Dbxref=NCBI_GP:WJH09424.1;Name=WJH09424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459792.1;locus_tag=PUW31_04045;product=YbhQ family protein;protein_id=WJH09424.1;transl_table=11 CP118128.1 Genbank gene 856548 857654 . - . ID=gene-PUW31_04050;Name=PUW31_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04050 CP118128.1 Protein Homology CDS 856548 857654 . - 0 ID=cds-WJH09425.1;Parent=gene-PUW31_04050;Dbxref=NCBI_GP:WJH09425.1;Name=WJH09425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459793.1;locus_tag=PUW31_04050;product=ABC transporter permease;protein_id=WJH09425.1;transl_table=11 CP118128.1 Genbank gene 857770 858900 . - . ID=gene-PUW31_04055;Name=PUW31_04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04055 CP118128.1 Protein Homology CDS 857770 858900 . - 0 ID=cds-WJH09426.1;Parent=gene-PUW31_04055;Dbxref=NCBI_GP:WJH09426.1;Name=WJH09426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459794.1;locus_tag=PUW31_04055;product=ABC transporter permease;protein_id=WJH09426.1;transl_table=11 CP118128.1 Genbank gene 858893 860629 . - . ID=gene-PUW31_04060;Name=PUW31_04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04060 CP118128.1 Protein Homology CDS 858893 860629 . - 0 ID=cds-WJH09427.1;Parent=gene-PUW31_04060;Dbxref=NCBI_GP:WJH09427.1;Name=WJH09427.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459795.1;locus_tag=PUW31_04060;product=ATP-binding cassette domain-containing protein;protein_id=WJH09427.1;transl_table=11 CP118128.1 Genbank gene 860622 861617 . - . ID=gene-PUW31_04065;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=PUW31_04065 CP118128.1 Protein Homology CDS 860622 861617 . - 0 ID=cds-WJH09428.1;Parent=gene-PUW31_04065;Dbxref=NCBI_GP:WJH09428.1;Name=WJH09428.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459796.1;locus_tag=PUW31_04065;product=secretion protein HlyD;protein_id=WJH09428.1;transl_table=11 CP118128.1 Genbank gene 861617 862291 . - . ID=gene-PUW31_04070;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=PUW31_04070 CP118128.1 Protein Homology CDS 861617 862291 . - 0 ID=cds-WJH09429.1;Parent=gene-PUW31_04070;Dbxref=NCBI_GP:WJH09429.1;Name=WJH09429.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459797.1;locus_tag=PUW31_04070;product=transcriptional regulator CecR;protein_id=WJH09429.1;transl_table=11 CP118128.1 Genbank gene 862521 863882 . + . ID=gene-PUW31_04075;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=PUW31_04075 CP118128.1 Protein Homology CDS 862521 863882 . + 0 ID=cds-WJH09430.1;Parent=gene-PUW31_04075;Dbxref=NCBI_GP:WJH09430.1;Name=WJH09430.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459798.1;locus_tag=PUW31_04075;product=ATP-dependent RNA helicase RhlE;protein_id=WJH09430.1;transl_table=11 CP118128.1 Genbank pseudogene 864090 866234 . + . ID=gene-PUW31_04080;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=pseudogene;locus_tag=PUW31_04080;pseudo=true CP118128.1 Protein Homology CDS 864090 866234 . + 0 ID=cds-PUW31_04080;Parent=gene-PUW31_04080;Note=internal stop;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459799.1;locus_tag=PUW31_04080;product=ATP-dependent DNA helicase DinG;pseudo=true;transl_table=11 CP118128.1 Genbank gene 866264 867238 . + . ID=gene-PUW31_04085;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=PUW31_04085 CP118128.1 Protein Homology CDS 866264 867238 . + 0 ID=cds-WJH09431.1;Parent=gene-PUW31_04085;Dbxref=NCBI_GP:WJH09431.1;Name=WJH09431.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459800.1;locus_tag=PUW31_04085;product=DNA-binding protein YbiB;protein_id=WJH09431.1;transl_table=11 CP118128.1 Genbank gene 867394 867654 . - . ID=gene-PUW31_04090;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=PUW31_04090 CP118128.1 Protein Homology CDS 867394 867654 . - 0 ID=cds-WJH09432.1;Parent=gene-PUW31_04090;Dbxref=NCBI_GP:WJH09432.1;Name=WJH09432.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459801.1;locus_tag=PUW31_04090;product=DUF1471 family protein YbiJ;protein_id=WJH09432.1;transl_table=11 CP118128.1 Genbank gene 867939 868205 . - . ID=gene-PUW31_04095;Name=PUW31_04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04095 CP118128.1 Protein Homology CDS 867939 868205 . - 0 ID=cds-WJH09433.1;Parent=gene-PUW31_04095;Dbxref=NCBI_GP:WJH09433.1;Name=WJH09433.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459802.1;locus_tag=PUW31_04095;product=DksA/TraR family C4-type zinc finger protein;protein_id=WJH09433.1;transl_table=11 CP118128.1 Genbank pseudogene 868410 869333 . + . ID=gene-PUW31_04100;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=pseudogene;locus_tag=PUW31_04100;pseudo=true CP118128.1 Protein Homology CDS 868410 869333 . + 0 ID=cds-PUW31_04100;Parent=gene-PUW31_04100;Note=frameshifted;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459803.1;locus_tag=PUW31_04100;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;pseudo=true;transl_table=11 CP118128.1 Genbank gene 869330 871552 . - . ID=gene-PUW31_04105;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=PUW31_04105 CP118128.1 Protein Homology CDS 869330 871552 . - 0 ID=cds-WJH09434.1;Parent=gene-PUW31_04105;Dbxref=NCBI_GP:WJH09434.1;Name=WJH09434.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459804.1;locus_tag=PUW31_04105;product=mechanosensitive channel protein;protein_id=WJH09434.1;transl_table=11 CP118128.1 Genbank gene 871671 872393 . - . ID=gene-PUW31_04110;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=PUW31_04110 CP118128.1 Protein Homology CDS 871671 872393 . - 0 ID=cds-WJH09435.1;Parent=gene-PUW31_04110;Dbxref=NCBI_GP:WJH09435.1;Name=WJH09435.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=PUW31_04110;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WJH09435.1;transl_table=11 CP118128.1 Genbank gene 872390 873049 . - . ID=gene-PUW31_04115;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=PUW31_04115 CP118128.1 Protein Homology CDS 872390 873049 . - 0 ID=cds-WJH09436.1;Parent=gene-PUW31_04115;Dbxref=NCBI_GP:WJH09436.1;Name=WJH09436.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=PUW31_04115;product=glutamine ABC transporter permease GlnP;protein_id=WJH09436.1;transl_table=11 CP118128.1 Genbank pseudogene 873193 873938 . - . ID=gene-PUW31_04120;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=pseudogene;locus_tag=PUW31_04120;pseudo=true CP118128.1 Protein Homology CDS 873193 873938 . - 0 ID=cds-PUW31_04120;Parent=gene-PUW31_04120;Note=frameshifted;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=glnH;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=PUW31_04120;product=glutamine ABC transporter substrate-binding protein GlnH;pseudo=true;transl_table=11 CP118128.1 Genbank gene 874415 874918 . - . ID=gene-PUW31_04125;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=PUW31_04125 CP118128.1 Protein Homology CDS 874415 874918 . - 0 ID=cds-WJH09437.1;Parent=gene-PUW31_04125;Dbxref=NCBI_GP:WJH09437.1;Name=WJH09437.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=PUW31_04125;product=DNA starvation/stationary phase protection protein Dps;protein_id=WJH09437.1;transl_table=11 CP118128.1 Genbank pseudogene 875221 876107 . - . ID=gene-PUW31_04130;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=pseudogene;locus_tag=PUW31_04130;pseudo=true CP118128.1 Protein Homology CDS 875221 876107 . - 0 ID=cds-PUW31_04130;Parent=gene-PUW31_04130;Note=frameshifted;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459809.1;locus_tag=PUW31_04130;product=threonine/homoserine exporter RhtA;pseudo=true;transl_table=11 CP118128.1 Genbank gene 876461 876976 . + . ID=gene-PUW31_04135;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=PUW31_04135 CP118128.1 Protein Homology CDS 876461 876976 . + 0 ID=cds-WJH09438.1;Parent=gene-PUW31_04135;Dbxref=NCBI_GP:WJH09438.1;Name=WJH09438.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459810.1;locus_tag=PUW31_04135;product=outer membrane protein OmpX;protein_id=WJH09438.1;transl_table=11 CP118128.1 Genbank gene 877039 878619 . - . ID=gene-PUW31_04140;Name=PUW31_04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04140 CP118128.1 Protein Homology CDS 877039 878619 . - 0 ID=cds-WJH09439.1;Parent=gene-PUW31_04140;Dbxref=NCBI_GP:WJH09439.1;Name=WJH09439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459811.1;locus_tag=PUW31_04140;product=phosphoethanolamine transferase;protein_id=WJH09439.1;transl_table=11 CP118128.1 Genbank gene 878884 879012 . - . ID=gene-PUW31_04145;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=PUW31_04145 CP118128.1 Protein Homology CDS 878884 879012 . - 0 ID=cds-WJH09440.1;Parent=gene-PUW31_04145;Dbxref=NCBI_GP:WJH09440.1;Name=WJH09440.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=PUW31_04145;product=manganase accumulation protein MntS;protein_id=WJH09440.1;transl_table=11 CP118128.1 Genbank gene 879198 879671 . + . ID=gene-PUW31_04150;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=PUW31_04150 CP118128.1 Protein Homology CDS 879198 879671 . + 0 ID=cds-WJH09441.1;Parent=gene-PUW31_04150;Dbxref=NCBI_GP:WJH09441.1;Name=WJH09441.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459812.1;locus_tag=PUW31_04150;product=manganese-binding transcriptional regulator MntR;protein_id=WJH09441.1;transl_table=11 CP118128.1 Genbank pseudogene 879668 880779 . + . ID=gene-PUW31_04155;Name=PUW31_04155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_04155;pseudo=true CP118128.1 Protein Homology CDS 879668 880779 . + 0 ID=cds-PUW31_04155;Parent=gene-PUW31_04155;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459813.1;locus_tag=PUW31_04155;product=anion transporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 880823 881743 . - . ID=gene-PUW31_04160;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=PUW31_04160 CP118128.1 Protein Homology CDS 880823 881743 . - 0 ID=cds-WJH09442.1;Parent=gene-PUW31_04160;Dbxref=NCBI_GP:WJH09442.1;Name=WJH09442.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459814.1;locus_tag=PUW31_04160;product=L%2CD-transpeptidase;protein_id=WJH09442.1;transl_table=11 CP118128.1 Genbank gene 881962 883554 . + . ID=gene-PUW31_04165;Name=PUW31_04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04165 CP118128.1 Protein Homology CDS 881962 883554 . + 0 ID=cds-WJH09443.1;Parent=gene-PUW31_04165;Dbxref=NCBI_GP:WJH09443.1;Name=WJH09443.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459815.1;locus_tag=PUW31_04165;product=ABC-F family ATPase;protein_id=WJH09443.1;transl_table=11 CP118128.1 Genbank pseudogene 883954 884696 . + . ID=gene-PUW31_04170;Name=PUW31_04170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_04170;pseudo=true CP118128.1 Protein Homology CDS 883954 884696 . + 0 ID=cds-PUW31_04170;Parent=gene-PUW31_04170;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459816.1;locus_tag=PUW31_04170;product=DUF4261 domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 884725 885453 . - . ID=gene-PUW31_04175;Name=PUW31_04175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_04175;pseudo=true CP118128.1 Protein Homology CDS 884725 885453 . - 0 ID=cds-PUW31_04175;Parent=gene-PUW31_04175;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000114249.1;locus_tag=PUW31_04175;product=Cof-type HAD-IIB family hydrolase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 885649 886914 . - . ID=gene-PUW31_04180;Name=PUW31_04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04180 CP118128.1 Protein Homology CDS 885649 886914 . - 0 ID=cds-WJH09444.1;Parent=gene-PUW31_04180;Dbxref=NCBI_GP:WJH09444.1;Name=WJH09444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459818.1;locus_tag=PUW31_04180;product=DUF1479 domain-containing protein;protein_id=WJH09444.1;transl_table=11 CP118128.1 Genbank gene 887176 887985 . + . ID=gene-PUW31_04185;Name=PUW31_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04185 CP118128.1 Protein Homology CDS 887176 887985 . + 0 ID=cds-WJH09445.1;Parent=gene-PUW31_04185;Dbxref=NCBI_GP:WJH09445.1;Name=WJH09445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459819.1;locus_tag=PUW31_04185;product=Cof-type HAD-IIB family hydrolase;protein_id=WJH09445.1;transl_table=11 CP118128.1 Genbank pseudogene 888063 890494 . - . ID=gene-PUW31_04190;Name=PUW31_04190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_04190;pseudo=true CP118128.1 Protein Homology CDS 888063 890494 . - 0 ID=cds-PUW31_04190;Parent=gene-PUW31_04190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459820.1;locus_tag=PUW31_04190;product=glycyl radical protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 890500 891399 . - . ID=gene-PUW31_04195;Name=PUW31_04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04195 CP118128.1 Protein Homology CDS 890500 891399 . - 0 ID=cds-WJH09446.1;Parent=gene-PUW31_04195;Dbxref=NCBI_GP:WJH09446.1;Name=WJH09446.1;Ontology_term=GO:0043687,GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459821.1;locus_tag=PUW31_04195;product=glycyl-radical enzyme activating protein;protein_id=WJH09446.1;transl_table=11 CP118128.1 Genbank gene 891677 892426 . - . ID=gene-PUW31_04200;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=PUW31_04200 CP118128.1 Protein Homology CDS 891677 892426 . - 0 ID=cds-WJH09447.1;Parent=gene-PUW31_04200;Dbxref=NCBI_GP:WJH09447.1;Name=WJH09447.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459822.1;locus_tag=PUW31_04200;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WJH09447.1;transl_table=11 CP118128.1 Genbank gene 892426 893661 . - . ID=gene-PUW31_04205;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=PUW31_04205 CP118128.1 Protein Homology CDS 892426 893661 . - 0 ID=cds-WJH09448.1;Parent=gene-PUW31_04205;Dbxref=NCBI_GP:WJH09448.1;Name=WJH09448.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308932.1;locus_tag=PUW31_04205;product=molybdopterin molybdotransferase MoeA;protein_id=WJH09448.1;transl_table=11 CP118128.1 Genbank gene 893864 894805 . + . ID=gene-PUW31_04210;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=PUW31_04210 CP118128.1 Protein Homology CDS 893864 894805 . + 0 ID=cds-WJH09449.1;Parent=gene-PUW31_04210;Dbxref=NCBI_GP:WJH09449.1;Name=WJH09449.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459824.1;locus_tag=PUW31_04210;product=beta-aspartyl-peptidase;protein_id=WJH09449.1;transl_table=11 CP118128.1 Genbank gene 894816 896687 . + . ID=gene-PUW31_04215;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=PUW31_04215 CP118128.1 Protein Homology CDS 894816 896687 . + 0 ID=cds-WJH09450.1;Parent=gene-PUW31_04215;Dbxref=NCBI_GP:WJH09450.1;Name=WJH09450.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459825.1;locus_tag=PUW31_04215;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WJH09450.1;transl_table=11 CP118128.1 Genbank gene 896720 898258 . + . ID=gene-PUW31_04220;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=PUW31_04220 CP118128.1 Protein Homology CDS 896720 898258 . + 0 ID=cds-WJH09451.1;Parent=gene-PUW31_04220;Dbxref=NCBI_GP:WJH09451.1;Name=WJH09451.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459826.1;locus_tag=PUW31_04220;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WJH09451.1;transl_table=11 CP118128.1 Genbank gene 898319 899239 . + . ID=gene-PUW31_04225;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=PUW31_04225 CP118128.1 Protein Homology CDS 898319 899239 . + 0 ID=cds-WJH09452.1;Parent=gene-PUW31_04225;Dbxref=NCBI_GP:WJH09452.1;Name=WJH09452.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459827.1;locus_tag=PUW31_04225;product=glutathione ABC transporter permease GsiC;protein_id=WJH09452.1;transl_table=11 CP118128.1 Genbank gene 899242 900153 . + . ID=gene-PUW31_04230;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=PUW31_04230 CP118128.1 Protein Homology CDS 899242 900153 . + 0 ID=cds-WJH09453.1;Parent=gene-PUW31_04230;Dbxref=NCBI_GP:WJH09453.1;Name=WJH09453.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459828.1;locus_tag=PUW31_04230;product=glutathione ABC transporter permease GsiD;protein_id=WJH09453.1;transl_table=11 CP118128.1 Genbank gene 900244 901569 . - . ID=gene-PUW31_04235;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=PUW31_04235 CP118128.1 Protein Homology CDS 900244 901569 . - 0 ID=cds-WJH09454.1;Parent=gene-PUW31_04235;Dbxref=NCBI_GP:WJH09454.1;Name=WJH09454.1;Ontology_term=GO:0018339,GO:0008172,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=rimO;go_function=S-methyltransferase activity|0008172||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459829.1;locus_tag=PUW31_04235;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WJH09454.1;transl_table=11 CP118128.1 Genbank gene 901800 902183 . + . ID=gene-PUW31_04240;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=PUW31_04240 CP118128.1 Protein Homology CDS 901800 902183 . + 0 ID=cds-WJH09455.1;Parent=gene-PUW31_04240;Dbxref=NCBI_GP:WJH09455.1;Name=WJH09455.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459830.1;locus_tag=PUW31_04240;product=biofilm formation regulator BssR;protein_id=WJH09455.1;transl_table=11 CP118128.1 Genbank pseudogene 902285 902531 . + . ID=gene-PUW31_04245;Name=PUW31_04245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_04245;pseudo=true CP118128.1 Protein Homology CDS 902285 902531 . + 0 ID=cds-PUW31_04245;Parent=gene-PUW31_04245;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_046881606.1;locus_tag=PUW31_04245;product=IS4 family transposase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 902896 903411 . + . ID=gene-PUW31_04250;Name=PUW31_04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04250 CP118128.1 Protein Homology CDS 902896 903411 . + 0 ID=cds-WJH09456.1;Parent=gene-PUW31_04250;Dbxref=NCBI_GP:WJH09456.1;Name=WJH09456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459831.1;locus_tag=PUW31_04250;product=CoA ester lyase;protein_id=WJH09456.1;transl_table=11 CP118128.1 Genbank gene 903329 904183 . + . ID=gene-PUW31_04255;Name=PUW31_04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04255 CP118128.1 Protein Homology CDS 903329 904183 . + 0 ID=cds-WJH09457.1;Parent=gene-PUW31_04255;Dbxref=NCBI_GP:WJH09457.1;Name=WJH09457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459832.3;locus_tag=PUW31_04255;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WJH09457.1;transl_table=11 CP118128.1 Genbank gene 904194 905147 . + . ID=gene-PUW31_04260;Name=PUW31_04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04260 CP118128.1 Protein Homology CDS 904194 905147 . + 0 ID=cds-WJH09458.1;Parent=gene-PUW31_04260;Dbxref=NCBI_GP:WJH09458.1;Name=WJH09458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459833.1;locus_tag=PUW31_04260;product=FAD-binding protein;protein_id=WJH09458.1;transl_table=11 CP118128.1 Genbank gene 905180 905377 . + . ID=gene-PUW31_04265;Name=PUW31_04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04265 CP118128.1 GeneMarkS-2+ CDS 905180 905377 . + 0 ID=cds-WJH09459.1;Parent=gene-PUW31_04265;Dbxref=NCBI_GP:WJH09459.1;Name=WJH09459.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_04265;product=hypothetical protein;protein_id=WJH09459.1;transl_table=11 CP118128.1 Genbank gene 905441 906604 . + . ID=gene-PUW31_04270;Name=PUW31_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04270 CP118128.1 Protein Homology CDS 905441 906604 . + 0 ID=cds-WJH09460.1;Parent=gene-PUW31_04270;Dbxref=NCBI_GP:WJH09460.1;Name=WJH09460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459834.1;locus_tag=PUW31_04270;product=acyl-CoA/acyl-ACP dehydrogenase;protein_id=WJH09460.1;transl_table=11 CP118128.1 Genbank gene 907053 908738 . + . ID=gene-PUW31_04275;Name=PUW31_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04275 CP118128.1 Protein Homology CDS 907053 908738 . + 0 ID=cds-WJH09461.1;Parent=gene-PUW31_04275;Dbxref=NCBI_GP:WJH09461.1;Name=WJH09461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459835.1;locus_tag=PUW31_04275;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=WJH09461.1;transl_table=11 CP118128.1 Genbank gene 908744 909634 . - . ID=gene-PUW31_04280;Name=PUW31_04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04280 CP118128.1 Protein Homology CDS 908744 909634 . - 0 ID=cds-WJH09462.1;Parent=gene-PUW31_04280;Dbxref=NCBI_GP:WJH09462.1;Name=WJH09462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459836.1;locus_tag=PUW31_04280;product=LysR family transcriptional regulator;protein_id=WJH09462.1;transl_table=11 CP118128.1 Genbank gene 909895 910320 . - . ID=gene-PUW31_04285;Name=PUW31_04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04285 CP118128.1 Protein Homology CDS 909895 910320 . - 0 ID=cds-WJH09463.1;Parent=gene-PUW31_04285;Dbxref=NCBI_GP:WJH09463.1;Name=WJH09463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459837.1;locus_tag=PUW31_04285;product=GntP family permease;protein_id=WJH09463.1;transl_table=11 CP118128.1 Genbank gene 910667 911164 . + . ID=gene-PUW31_04290;Name=PUW31_04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04290 CP118128.1 Protein Homology CDS 910667 911164 . + 0 ID=cds-WJH10658.1;Parent=gene-PUW31_04290;Dbxref=NCBI_GP:WJH10658.1;Name=WJH10658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611160.1;locus_tag=PUW31_04290;product=PQQ-dependent sugar dehydrogenase;protein_id=WJH10658.1;transl_table=11 CP118128.1 Genbank gene 911185 911346 . + . ID=gene-PUW31_04295;Name=PUW31_04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04295 CP118128.1 Protein Homology CDS 911185 911346 . + 0 ID=cds-WJH10659.1;Parent=gene-PUW31_04295;Dbxref=NCBI_GP:WJH10659.1;Name=WJH10659.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019607.2;locus_tag=PUW31_04295;product=PQQ-dependent sugar dehydrogenase;protein_id=WJH10659.1;transl_table=11 CP118128.1 Genbank gene 911343 911969 . - . ID=gene-PUW31_04300;Name=PUW31_04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04300 CP118128.1 Protein Homology CDS 911343 911969 . - 0 ID=cds-WJH09464.1;Parent=gene-PUW31_04300;Dbxref=NCBI_GP:WJH09464.1;Name=WJH09464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459839.1;locus_tag=PUW31_04300;product=glutathione S-transferase family protein;protein_id=WJH09464.1;transl_table=11 CP118128.1 Genbank gene 912213 913415 . + . ID=gene-PUW31_04305;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=PUW31_04305 CP118128.1 Protein Homology CDS 912213 913415 . + 0 ID=cds-WJH09465.1;Parent=gene-PUW31_04305;Dbxref=NCBI_GP:WJH09465.1;Name=WJH09465.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459840.1;locus_tag=PUW31_04305;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WJH09465.1;transl_table=11 CP118128.1 Genbank gene 913460 914218 . - . ID=gene-PUW31_04310;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=PUW31_04310 CP118128.1 Protein Homology CDS 913460 914218 . - 0 ID=cds-WJH09466.1;Parent=gene-PUW31_04310;Dbxref=NCBI_GP:WJH09466.1;Name=WJH09466.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459841.1;locus_tag=PUW31_04310;product=DNA-binding transcriptional repressor DeoR;protein_id=WJH09466.1;transl_table=11 CP118128.1 Genbank gene 914290 914898 . - . ID=gene-PUW31_04315;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=PUW31_04315 CP118128.1 Protein Homology CDS 914290 914898 . - 0 ID=cds-WJH10660.1;Parent=gene-PUW31_04315;Dbxref=NCBI_GP:WJH10660.1;Name=WJH10660.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459842.1;locus_tag=PUW31_04315;product=undecaprenyl-diphosphate phosphatase;protein_id=WJH10660.1;transl_table=11 CP118128.1 Genbank gene 915211 916443 . + . ID=gene-PUW31_04320;Name=PUW31_04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04320 CP118128.1 Protein Homology CDS 915211 916443 . + 0 ID=cds-WJH09467.1;Parent=gene-PUW31_04320;Dbxref=NCBI_GP:WJH09467.1;Name=WJH09467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459843.1;locus_tag=PUW31_04320;product=MFS transporter;protein_id=WJH09467.1;transl_table=11 CP118128.1 Genbank gene 916497 917312 . - . ID=gene-PUW31_04325;Name=PUW31_04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04325 CP118128.1 Protein Homology CDS 916497 917312 . - 0 ID=cds-WJH09468.1;Parent=gene-PUW31_04325;Dbxref=NCBI_GP:WJH09468.1;Name=WJH09468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459844.1;locus_tag=PUW31_04325;product=Cof-type HAD-IIB family hydrolase;protein_id=WJH09468.1;transl_table=11 CP118128.1 Genbank gene 917309 918520 . - . ID=gene-PUW31_04330;Name=PUW31_04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04330 CP118128.1 Protein Homology CDS 917309 918520 . - 0 ID=cds-WJH09469.1;Parent=gene-PUW31_04330;Dbxref=NCBI_GP:WJH09469.1;Name=WJH09469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459845.1;locus_tag=PUW31_04330;product=MFS transporter;protein_id=WJH09469.1;transl_table=11 CP118128.1 Genbank gene 918679 919299 . + . ID=gene-PUW31_04335;Name=PUW31_04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04335 CP118128.1 Protein Homology CDS 918679 919299 . + 0 ID=cds-WJH09470.1;Parent=gene-PUW31_04335;Dbxref=NCBI_GP:WJH09470.1;Name=WJH09470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459846.1;locus_tag=PUW31_04335;product=TetR/AcrR family transcriptional regulator;protein_id=WJH09470.1;transl_table=11 CP118128.1 Genbank gene 919416 921101 . - . ID=gene-PUW31_04340;Name=PUW31_04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04340 CP118128.1 Protein Homology CDS 919416 921101 . - 0 ID=cds-WJH09471.1;Parent=gene-PUW31_04340;Dbxref=NCBI_GP:WJH09471.1;Name=WJH09471.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=PUW31_04340;product=aspartate:alanine antiporter;protein_id=WJH09471.1;transl_table=11 CP118128.1 Genbank gene 921372 921749 . + . ID=gene-PUW31_04345;Name=PUW31_04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04345 CP118128.1 Protein Homology CDS 921372 921749 . + 0 ID=cds-WJH09472.1;Parent=gene-PUW31_04345;Dbxref=NCBI_GP:WJH09472.1;Name=WJH09472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459848.1;locus_tag=PUW31_04345;product=inner membrane protein YbjM;protein_id=WJH09472.1;transl_table=11 CP118128.1 Genbank gene 921781 922044 . - . ID=gene-PUW31_04350;Name=PUW31_04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04350 CP118128.1 Protein Homology CDS 921781 922044 . - 0 ID=cds-WJH09473.1;Parent=gene-PUW31_04350;Dbxref=NCBI_GP:WJH09473.1;Name=WJH09473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459849.1;locus_tag=PUW31_04350;product=GrxA family glutaredoxin;protein_id=WJH09473.1;transl_table=11 CP118128.1 Genbank gene 922214 922504 . + . ID=gene-PUW31_04355;Name=PUW31_04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04355 CP118128.1 Protein Homology CDS 922214 922504 . + 0 ID=cds-WJH09474.1;Parent=gene-PUW31_04355;Dbxref=NCBI_GP:WJH09474.1;Name=WJH09474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459850.1;locus_tag=PUW31_04355;product=YbjC family protein;protein_id=WJH09474.1;transl_table=11 CP118128.1 Genbank gene 922488 923210 . + . ID=gene-PUW31_04360;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=PUW31_04360 CP118128.1 Protein Homology CDS 922488 923210 . + 0 ID=cds-WJH09475.1;Parent=gene-PUW31_04360;Dbxref=NCBI_GP:WJH09475.1;Name=WJH09475.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459851.1;locus_tag=PUW31_04360;product=nitroreductase NfsA;protein_id=WJH09475.1;transl_table=11 CP118128.1 Genbank gene 923268 924170 . + . ID=gene-PUW31_04365;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=PUW31_04365 CP118128.1 Protein Homology CDS 923268 924170 . + 0 ID=cds-WJH09476.1;Parent=gene-PUW31_04365;Dbxref=NCBI_GP:WJH09476.1;Name=WJH09476.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459852.1;locus_tag=PUW31_04365;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WJH09476.1;transl_table=11 CP118128.1 Genbank gene 924267 924743 . + . ID=gene-PUW31_04370;Name=PUW31_04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04370 CP118128.1 Protein Homology CDS 924267 924743 . + 0 ID=cds-WJH09477.1;Parent=gene-PUW31_04370;Dbxref=NCBI_GP:WJH09477.1;Name=WJH09477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459853.1;locus_tag=PUW31_04370;product=YbjN domain-containing protein;protein_id=WJH09477.1;transl_table=11 CP118128.1 Genbank gene 925092 926204 . + . ID=gene-PUW31_04375;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=PUW31_04375 CP118128.1 Protein Homology CDS 925092 926204 . + 0 ID=cds-WJH10661.1;Parent=gene-PUW31_04375;Dbxref=NCBI_GP:WJH10661.1;Name=WJH10661.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459854.1;locus_tag=PUW31_04375;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WJH10661.1;transl_table=11 CP118128.1 Genbank gene 926292 927425 . + . ID=gene-PUW31_04380;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=PUW31_04380 CP118128.1 Protein Homology CDS 926292 927425 . + 0 ID=cds-WJH09478.1;Parent=gene-PUW31_04380;Dbxref=NCBI_GP:WJH09478.1;Name=WJH09478.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=PUW31_04380;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WJH09478.1;transl_table=11 CP118128.1 Genbank gene 927435 928388 . + . ID=gene-PUW31_04385;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=PUW31_04385 CP118128.1 Protein Homology CDS 927435 928388 . + 0 ID=cds-WJH09479.1;Parent=gene-PUW31_04385;Dbxref=NCBI_GP:WJH09479.1;Name=WJH09479.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459856.1;locus_tag=PUW31_04385;product=putrescine ABC transporter permease PotH;protein_id=WJH09479.1;transl_table=11 CP118128.1 Genbank gene 928385 929236 . + . ID=gene-PUW31_04390;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=PUW31_04390 CP118128.1 Protein Homology CDS 928385 929236 . + 0 ID=cds-WJH09480.1;Parent=gene-PUW31_04390;Dbxref=NCBI_GP:WJH09480.1;Name=WJH09480.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459857.1;locus_tag=PUW31_04390;product=putrescine ABC transporter permease PotI;protein_id=WJH09480.1;transl_table=11 CP118128.1 Genbank gene 929310 929783 . + . ID=gene-PUW31_04395;Name=PUW31_04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04395 CP118128.1 Protein Homology CDS 929310 929783 . + 0 ID=cds-WJH10662.1;Parent=gene-PUW31_04395;Dbxref=NCBI_GP:WJH10662.1;Name=WJH10662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459858.1;locus_tag=PUW31_04395;product=YbjO family protein;protein_id=WJH10662.1;transl_table=11 CP118128.1 Genbank gene 929874 930953 . + . ID=gene-PUW31_04400;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=PUW31_04400 CP118128.1 Protein Homology CDS 929874 930953 . + 0 ID=cds-WJH10663.1;Parent=gene-PUW31_04400;Dbxref=NCBI_GP:WJH10663.1;Name=WJH10663.1;Ontology_term=GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001149796.1;locus_tag=PUW31_04400;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WJH10663.1;transl_table=11 CP118128.1 Genbank gene 931248 932591 . + . ID=gene-PUW31_04405;Name=PUW31_04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04405 CP118128.1 Protein Homology CDS 931248 932591 . + 0 ID=cds-WJH09481.1;Parent=gene-PUW31_04405;Dbxref=NCBI_GP:WJH09481.1;Name=WJH09481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459860.1;locus_tag=PUW31_04405;product=PTS sugar transporter subunit IIC;protein_id=WJH09481.1;transl_table=11 CP118128.1 Genbank gene 932621 932941 . + . ID=gene-PUW31_04410;Name=PUW31_04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04410 CP118128.1 Protein Homology CDS 932621 932941 . + 0 ID=cds-WJH09482.1;Parent=gene-PUW31_04410;Dbxref=NCBI_GP:WJH09482.1;Name=WJH09482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459861.1;locus_tag=PUW31_04410;product=PTS sugar transporter subunit IIB;protein_id=WJH09482.1;transl_table=11 CP118128.1 Genbank gene 932951 934438 . + . ID=gene-PUW31_04415;Name=PUW31_04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04415 CP118128.1 Protein Homology CDS 932951 934438 . + 0 ID=cds-WJH09483.1;Parent=gene-PUW31_04415;Dbxref=NCBI_GP:WJH09483.1;Name=WJH09483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459862.1;locus_tag=PUW31_04415;product=sulfatase;protein_id=WJH09483.1;transl_table=11 CP118128.1 Genbank gene 934657 935388 . - . ID=gene-PUW31_04420;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=PUW31_04420 CP118128.1 Protein Homology CDS 934657 935388 . - 0 ID=cds-WJH09484.1;Parent=gene-PUW31_04420;Dbxref=NCBI_GP:WJH09484.1;Name=WJH09484.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459863.1;locus_tag=PUW31_04420;product=ABC transporter substrate-binding protein ArtJ;protein_id=WJH09484.1;transl_table=11 CP118128.1 Genbank gene 935625 936293 . - . ID=gene-PUW31_04425;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=PUW31_04425 CP118128.1 Protein Homology CDS 935625 936293 . - 0 ID=cds-WJH09485.1;Parent=gene-PUW31_04425;Dbxref=NCBI_GP:WJH09485.1;Name=WJH09485.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459864.1;locus_tag=PUW31_04425;product=arginine ABC transporter permease ArtM;protein_id=WJH09485.1;transl_table=11 CP118128.1 Genbank gene 936293 937009 . - . ID=gene-PUW31_04430;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=PUW31_04430 CP118128.1 Protein Homology CDS 936293 937009 . - 0 ID=cds-WJH09486.1;Parent=gene-PUW31_04430;Dbxref=NCBI_GP:WJH09486.1;Name=WJH09486.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459865.1;locus_tag=PUW31_04430;product=arginine ABC transporter permease ArtQ;protein_id=WJH09486.1;transl_table=11 CP118128.1 Genbank gene 937016 937747 . - . ID=gene-PUW31_04435;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=PUW31_04435 CP118128.1 Protein Homology CDS 937016 937747 . - 0 ID=cds-WJH09487.1;Parent=gene-PUW31_04435;Dbxref=NCBI_GP:WJH09487.1;Name=WJH09487.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459866.1;locus_tag=PUW31_04435;product=arginine ABC transporter substrate-binding protein;protein_id=WJH09487.1;transl_table=11 CP118128.1 Genbank gene 937765 938493 . - . ID=gene-PUW31_04440;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=PUW31_04440 CP118128.1 Protein Homology CDS 937765 938493 . - 0 ID=cds-WJH09488.1;Parent=gene-PUW31_04440;Dbxref=NCBI_GP:WJH09488.1;Name=WJH09488.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=artP;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=PUW31_04440;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WJH09488.1;transl_table=11 CP118128.1 Genbank gene 938723 939238 . - . ID=gene-PUW31_04445;Name=PUW31_04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04445 CP118128.1 Protein Homology CDS 938723 939238 . - 0 ID=cds-WJH09489.1;Parent=gene-PUW31_04445;Dbxref=NCBI_GP:WJH09489.1;Name=WJH09489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459868.1;locus_tag=PUW31_04445;product=lipoprotein;protein_id=WJH09489.1;transl_table=11 CP118128.1 Genbank gene 939366 939689 . + . ID=gene-PUW31_04450;Name=PUW31_04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04450 CP118128.1 Protein Homology CDS 939366 939689 . + 0 ID=cds-WJH09490.1;Parent=gene-PUW31_04450;Dbxref=NCBI_GP:WJH09490.1;Name=WJH09490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=PUW31_04450;product=heavy metal-binding domain-containing protein;protein_id=WJH09490.1;transl_table=11 CP118128.1 Genbank gene 939686 940516 . + . ID=gene-PUW31_04455;Name=PUW31_04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04455 CP118128.1 Protein Homology CDS 939686 940516 . + 0 ID=cds-WJH09491.1;Parent=gene-PUW31_04455;Dbxref=NCBI_GP:WJH09491.1;Name=WJH09491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459908.1;locus_tag=PUW31_04455;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WJH09491.1;transl_table=11 CP118128.1 Genbank gene 940513 941526 . - . ID=gene-PUW31_04460;Name=PUW31_04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04460 CP118128.1 Protein Homology CDS 940513 941526 . - 0 ID=cds-WJH09492.1;Parent=gene-PUW31_04460;Dbxref=NCBI_GP:WJH09492.1;Name=WJH09492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459909.1;locus_tag=PUW31_04460;product=NAD(P)-dependent oxidoreductase;protein_id=WJH09492.1;transl_table=11 CP118128.1 Genbank pseudogene 941622 943054 . - . ID=gene-PUW31_04465;Name=PUW31_04465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_04465;pseudo=true CP118128.1 Protein Homology CDS 941622 943054 . - 0 ID=cds-PUW31_04465;Parent=gene-PUW31_04465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459910.1;locus_tag=PUW31_04465;product=DUF2867 domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 943065 944066 . - . ID=gene-PUW31_04470;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=PUW31_04470 CP118128.1 Protein Homology CDS 943065 944066 . - 0 ID=cds-WJH09493.1;Parent=gene-PUW31_04470;Dbxref=NCBI_GP:WJH09493.1;Name=WJH09493.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459911.1;locus_tag=PUW31_04470;product=low-specificity L-threonine aldolase;protein_id=WJH09493.1;transl_table=11 CP118128.1 Genbank gene 944105 945823 . - . ID=gene-PUW31_04475;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=PUW31_04475 CP118128.1 Protein Homology CDS 944105 945823 . - 0 ID=cds-WJH09494.1;Parent=gene-PUW31_04475;Dbxref=NCBI_GP:WJH09494.1;Name=WJH09494.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459912.1;locus_tag=PUW31_04475;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WJH09494.1;transl_table=11 CP118128.1 Genbank gene 945981 946949 . - . ID=gene-PUW31_04480;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=PUW31_04480 CP118128.1 Protein Homology CDS 945981 946949 . - 0 ID=cds-WJH10664.1;Parent=gene-PUW31_04480;Dbxref=NCBI_GP:WJH10664.1;Name=WJH10664.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308985.1;locus_tag=PUW31_04480;product=NADH oxidoreductase;protein_id=WJH10664.1;transl_table=11 CP118128.1 Genbank gene 946961 948613 . - . ID=gene-PUW31_04485;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=PUW31_04485 CP118128.1 Protein Homology CDS 946961 948613 . - 0 ID=cds-WJH09495.1;Parent=gene-PUW31_04485;Dbxref=NCBI_GP:WJH09495.1;Name=WJH09495.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=PUW31_04485;product=hydroxylamine reductase;protein_id=WJH09495.1;transl_table=11 CP118128.1 Genbank gene 948757 949656 . - . ID=gene-PUW31_04490;Name=PUW31_04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04490 CP118128.1 Protein Homology CDS 948757 949656 . - 0 ID=cds-WJH09496.1;Parent=gene-PUW31_04490;Dbxref=NCBI_GP:WJH09496.1;Name=WJH09496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459915.1;locus_tag=PUW31_04490;product=lysine exporter LysO family protein;protein_id=WJH09496.1;transl_table=11 CP118128.1 Genbank gene 949858 951516 . + . ID=gene-PUW31_04495;Name=PUW31_04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04495 CP118128.1 Protein Homology CDS 949858 951516 . + 0 ID=cds-WJH09497.1;Parent=gene-PUW31_04495;Dbxref=NCBI_GP:WJH09497.1;Name=WJH09497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459916.2;locus_tag=PUW31_04495;product=ATP-dependent endonuclease;protein_id=WJH09497.1;transl_table=11 CP118128.1 Genbank pseudogene 951513 952467 . - . ID=gene-PUW31_04500;Name=PUW31_04500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_04500;pseudo=true CP118128.1 Protein Homology CDS 951513 952467 . - 0 ID=cds-PUW31_04500;Parent=gene-PUW31_04500;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519667.1;locus_tag=PUW31_04500;product=VirK/YbjX family protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 952613 953727 . + . ID=gene-PUW31_04505;Name=macA;gbkey=Gene;gene=macA;gene_biotype=pseudogene;locus_tag=PUW31_04505;pseudo=true CP118128.1 Protein Homology CDS 952613 953727 . + 0 ID=cds-PUW31_04505;Parent=gene-PUW31_04505;Note=frameshifted;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459918.1;locus_tag=PUW31_04505;product=macrolide transporter subunit MacA;pseudo=true;transl_table=11 CP118128.1 Genbank gene 953724 955670 . + . ID=gene-PUW31_04510;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=PUW31_04510 CP118128.1 Protein Homology CDS 953724 955670 . + 0 ID=cds-WJH09498.1;Parent=gene-PUW31_04510;Dbxref=NCBI_GP:WJH09498.1;Name=WJH09498.1;Ontology_term=GO:0005524,GO:0016020;gbkey=CDS;gene=macB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459919.1;locus_tag=PUW31_04510;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WJH09498.1;transl_table=11 CP118128.1 Genbank gene 955800 956021 . - . ID=gene-PUW31_04515;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=PUW31_04515 CP118128.1 Protein Homology CDS 955800 956021 . - 0 ID=cds-WJH09499.1;Parent=gene-PUW31_04515;Dbxref=NCBI_GP:WJH09499.1;Name=WJH09499.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459920.1;locus_tag=PUW31_04515;product=cold shock-like protein CspD;protein_id=WJH09499.1;transl_table=11 CP118128.1 Genbank gene 956172 956249 . + . ID=gene-PUW31_04520;Name=PUW31_04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04520 CP118128.1 Protein Homology CDS 956172 956249 . + 0 ID=cds-WJH10665.1;Parent=gene-PUW31_04520;Dbxref=NCBI_GP:WJH10665.1;Name=WJH10665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=PUW31_04520;product=hypothetical protein;protein_id=WJH10665.1;transl_table=11 CP118128.1 Genbank gene 956345 956665 . + . ID=gene-PUW31_04525;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=PUW31_04525 CP118128.1 Protein Homology CDS 956345 956665 . + 0 ID=cds-WJH09500.1;Parent=gene-PUW31_04525;Dbxref=NCBI_GP:WJH09500.1;Name=WJH09500.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=PUW31_04525;product=ATP-dependent Clp protease adapter ClpS;protein_id=WJH09500.1;transl_table=11 CP118128.1 Genbank gene 956696 958972 . + . ID=gene-PUW31_04530;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=PUW31_04530 CP118128.1 Protein Homology CDS 956696 958972 . + 0 ID=cds-WJH09501.1;Parent=gene-PUW31_04530;Dbxref=NCBI_GP:WJH09501.1;Name=WJH09501.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459922.1;locus_tag=PUW31_04530;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WJH09501.1;transl_table=11 CP118128.1 Genbank gene 959185 959382 . - . ID=gene-PUW31_04535;Name=PUW31_04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04535 CP118128.1 Protein Homology CDS 959185 959382 . - 0 ID=cds-WJH09502.1;Parent=gene-PUW31_04535;Dbxref=NCBI_GP:WJH09502.1;Name=WJH09502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111984.1;locus_tag=PUW31_04535;product=hypothetical protein;protein_id=WJH09502.1;transl_table=11 CP118128.1 Genbank gene 959544 959921 . - . ID=gene-PUW31_04540;Name=PUW31_04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04540 CP118128.1 Protein Homology CDS 959544 959921 . - 0 ID=cds-WJH09503.1;Parent=gene-PUW31_04540;Dbxref=NCBI_GP:WJH09503.1;Name=WJH09503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535855.1;locus_tag=PUW31_04540;product=integrase;protein_id=WJH09503.1;transl_table=11 CP118128.1 Genbank gene 960352 960438 . - . ID=gene-PUW31_04545;Name=PUW31_04545;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_04545 CP118128.1 tRNAscan-SE tRNA 960352 960438 . - . ID=rna-PUW31_04545;Parent=gene-PUW31_04545;anticodon=(pos:complement(960402..960404));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_04545;product=tRNA-Ser CP118128.1 tRNAscan-SE exon 960352 960438 . - . ID=exon-PUW31_04545-1;Parent=rna-PUW31_04545;anticodon=(pos:complement(960402..960404));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_04545;product=tRNA-Ser CP118128.1 Genbank gene 960587 961264 . - . ID=gene-PUW31_04550;Name=PUW31_04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04550 CP118128.1 Protein Homology CDS 960587 961264 . - 0 ID=cds-WJH09504.1;Parent=gene-PUW31_04550;Dbxref=NCBI_GP:WJH09504.1;Name=WJH09504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459926.1;locus_tag=PUW31_04550;product=hydrolase;protein_id=WJH09504.1;transl_table=11 CP118128.1 Genbank gene 961284 962144 . - . ID=gene-PUW31_04555;Name=PUW31_04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04555 CP118128.1 Protein Homology CDS 961284 962144 . - 0 ID=cds-WJH09505.1;Parent=gene-PUW31_04555;Dbxref=NCBI_GP:WJH09505.1;Name=WJH09505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459927.1;locus_tag=PUW31_04555;product=pirin family protein;protein_id=WJH09505.1;transl_table=11 CP118128.1 Genbank gene 962253 963164 . + . ID=gene-PUW31_04560;Name=PUW31_04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04560 CP118128.1 Protein Homology CDS 962253 963164 . + 0 ID=cds-WJH09506.1;Parent=gene-PUW31_04560;Dbxref=NCBI_GP:WJH09506.1;Name=WJH09506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459928.1;locus_tag=PUW31_04560;product=LysR family transcriptional regulator;protein_id=WJH09506.1;transl_table=11 CP118128.1 Genbank gene 963255 963473 . - . ID=gene-PUW31_04565;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=PUW31_04565 CP118128.1 Protein Homology CDS 963255 963473 . - 0 ID=cds-WJH09507.1;Parent=gene-PUW31_04565;Dbxref=NCBI_GP:WJH09507.1;Name=WJH09507.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=PUW31_04565;product=translation initiation factor IF-1;protein_id=WJH09507.1;transl_table=11 CP118128.1 Genbank gene 963401 963784 . - . ID=gene-PUW31_04570;Name=PUW31_04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04570 CP118128.1 Protein Homology CDS 963401 963784 . - 0 ID=cds-WJH09508.1;Parent=gene-PUW31_04570;Dbxref=NCBI_GP:WJH09508.1;Name=WJH09508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459930.1;locus_tag=PUW31_04570;product=hypothetical protein;protein_id=WJH09508.1;transl_table=11 CP118128.1 Genbank gene 963785 964489 . - . ID=gene-PUW31_04575;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=PUW31_04575 CP118128.1 Protein Homology CDS 963785 964489 . - 0 ID=cds-WJH09509.1;Parent=gene-PUW31_04575;Dbxref=NCBI_GP:WJH09509.1;Name=WJH09509.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyltransferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459931.1;locus_tag=PUW31_04575;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WJH09509.1;transl_table=11 CP118128.1 Genbank gene 964534 966255 . - . ID=gene-PUW31_04580;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=PUW31_04580 CP118128.1 Protein Homology CDS 964534 966255 . - 0 ID=cds-WJH09510.1;Parent=gene-PUW31_04580;Dbxref=NCBI_GP:WJH09510.1;Name=WJH09510.1;Ontology_term=GO:0034775,GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=glutathione transmembrane transport|0034775||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459932.1;locus_tag=PUW31_04580;product=cysteine/glutathione ABC transporter ATP-binding protein/permease CydC;protein_id=WJH09510.1;transl_table=11 CP118128.1 Genbank gene 966256 968022 . - . ID=gene-PUW31_04585;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=PUW31_04585 CP118128.1 Protein Homology CDS 966256 968022 . - 0 ID=cds-WJH09511.1;Parent=gene-PUW31_04585;Dbxref=NCBI_GP:WJH09511.1;Name=WJH09511.1;Ontology_term=GO:0042883,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=cysteine transport|0042883||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459933.1;locus_tag=PUW31_04585;product=cysteine/glutathione ABC transporter permease/ATP-binding protein CydD;protein_id=WJH09511.1;transl_table=11 CP118128.1 Genbank gene 968136 969104 . - . ID=gene-PUW31_04590;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=PUW31_04590 CP118128.1 Protein Homology CDS 968136 969104 . - 0 ID=cds-WJH09512.1;Parent=gene-PUW31_04590;Dbxref=NCBI_GP:WJH09512.1;Name=WJH09512.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459934.1;locus_tag=PUW31_04590;product=thioredoxin-disulfide reductase;protein_id=WJH09512.1;transl_table=11 CP118128.1 Genbank gene 969650 970144 . + . ID=gene-PUW31_04595;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=PUW31_04595 CP118128.1 Protein Homology CDS 969650 970144 . + 0 ID=cds-WJH09513.1;Parent=gene-PUW31_04595;Dbxref=NCBI_GP:WJH09513.1;Name=WJH09513.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=PUW31_04595;product=leucine-responsive transcriptional regulator Lrp;protein_id=WJH09513.1;transl_table=11 CP118128.1 Genbank gene 970279 974328 . + . ID=gene-PUW31_04600;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=PUW31_04600 CP118128.1 Protein Homology CDS 970279 974328 . + 0 ID=cds-WJH09514.1;Parent=gene-PUW31_04600;Dbxref=NCBI_GP:WJH09514.1;Name=WJH09514.1;Ontology_term=GO:0003677,GO:0005524;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=PUW31_04600;product=DNA translocase FtsK;protein_id=WJH09514.1;transl_table=11 CP118128.1 Genbank gene 974471 975082 . + . ID=gene-PUW31_04605;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=PUW31_04605 CP118128.1 Protein Homology CDS 974471 975082 . + 0 ID=cds-WJH10666.1;Parent=gene-PUW31_04605;Dbxref=NCBI_GP:WJH10666.1;Name=WJH10666.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=PUW31_04605;product=outer membrane lipoprotein chaperone LolA;protein_id=WJH10666.1;transl_table=11 CP118128.1 Genbank gene 975092 976435 . + . ID=gene-PUW31_04610;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=PUW31_04610 CP118128.1 Protein Homology CDS 975092 976435 . + 0 ID=cds-WJH09515.1;Parent=gene-PUW31_04610;Dbxref=NCBI_GP:WJH09515.1;Name=WJH09515.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123573.1;locus_tag=PUW31_04610;product=replication-associated recombination protein RarA;protein_id=WJH09515.1;transl_table=11 CP118128.1 Genbank gene 976694 977986 . + . ID=gene-PUW31_04615;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=PUW31_04615 CP118128.1 Protein Homology CDS 976694 977986 . + 0 ID=cds-WJH09516.1;Parent=gene-PUW31_04615;Dbxref=NCBI_GP:WJH09516.1;Name=WJH09516.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=PUW31_04615;product=serine--tRNA ligase;protein_id=WJH09516.1;transl_table=11 CP118128.1 Genbank gene 978223 980667 . + . ID=gene-PUW31_04620;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=PUW31_04620 CP118128.1 Protein Homology CDS 978223 980667 . + 0 ID=cds-WJH09517.1;Parent=gene-PUW31_04620;Dbxref=NCBI_GP:WJH09517.1;Name=WJH09517.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459940.1;locus_tag=PUW31_04620;product=dimethylsulfoxide reductase subunit A;protein_id=WJH09517.1;transl_table=11 CP118128.1 Genbank gene 980678 981295 . + . ID=gene-PUW31_04625;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=PUW31_04625 CP118128.1 Protein Homology CDS 980678 981295 . + 0 ID=cds-WJH09518.1;Parent=gene-PUW31_04625;Dbxref=NCBI_GP:WJH09518.1;Name=WJH09518.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=PUW31_04625;product=dimethylsulfoxide reductase subunit B;protein_id=WJH09518.1;transl_table=11 CP118128.1 Genbank gene 981297 982160 . + . ID=gene-PUW31_04630;Name=PUW31_04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04630 CP118128.1 Protein Homology CDS 981297 982160 . + 0 ID=cds-WJH09519.1;Parent=gene-PUW31_04630;Dbxref=NCBI_GP:WJH09519.1;Name=WJH09519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459942.1;locus_tag=PUW31_04630;product=dimethyl sulfoxide reductase anchor subunit;protein_id=WJH09519.1;transl_table=11 CP118128.1 Genbank gene 982510 983658 . + . ID=gene-PUW31_04635;Name=PUW31_04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04635 CP118128.1 Protein Homology CDS 982510 983658 . + 0 ID=cds-WJH09520.1;Parent=gene-PUW31_04635;Dbxref=NCBI_GP:WJH09520.1;Name=WJH09520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459943.1;locus_tag=PUW31_04635;product=MFS transporter;protein_id=WJH09520.1;transl_table=11 CP118128.1 Genbank gene 983876 985297 . + . ID=gene-PUW31_04640;Name=PUW31_04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04640 CP118128.1 Protein Homology CDS 983876 985297 . + 0 ID=cds-WJH09521.1;Parent=gene-PUW31_04640;Dbxref=NCBI_GP:WJH09521.1;Name=WJH09521.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459944.1;locus_tag=PUW31_04640;product=amino acid permease;protein_id=WJH09521.1;transl_table=11 CP118128.1 Genbank gene 985590 986387 . - . ID=gene-PUW31_04645;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=PUW31_04645 CP118128.1 Protein Homology CDS 985590 986387 . - 0 ID=cds-WJH09522.1;Parent=gene-PUW31_04645;Dbxref=NCBI_GP:WJH09522.1;Name=WJH09522.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015696619.1;locus_tag=PUW31_04645;product=pyruvate formate lyase 1-activating protein;protein_id=WJH09522.1;transl_table=11 CP118128.1 Genbank gene 986506 986832 . - . ID=gene-PUW31_04650;Name=PUW31_04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04650 CP118128.1 Protein Homology CDS 986506 986832 . - 0 ID=cds-WJH10667.1;Parent=gene-PUW31_04650;Dbxref=NCBI_GP:WJH10667.1;Name=WJH10667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459946.1;locus_tag=PUW31_04650;product=cytoplasmic protein;protein_id=WJH10667.1;transl_table=11 CP118128.1 Genbank gene 986962 987921 . + . ID=gene-PUW31_04655;Name=sopD2;gbkey=Gene;gene=sopD2;gene_biotype=protein_coding;locus_tag=PUW31_04655 CP118128.1 Protein Homology CDS 986962 987921 . + 0 ID=cds-WJH09523.1;Parent=gene-PUW31_04655;Dbxref=NCBI_GP:WJH09523.1;Name=WJH09523.1;gbkey=CDS;gene=sopD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459947.1;locus_tag=PUW31_04655;product=SPI-2 type III secretion system effector SopD2;protein_id=WJH09523.1;transl_table=11 CP118128.1 Genbank pseudogene 987997 990278 . - . ID=gene-PUW31_04660;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=pseudogene;locus_tag=PUW31_04660;pseudo=true CP118128.1 Protein Homology CDS 987997 990278 . - 0 ID=cds-PUW31_04660;Parent=gene-PUW31_04660;Note=frameshifted;Ontology_term=GO:0006113,GO:0015942,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=fermentation|0006113||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459948.1;locus_tag=PUW31_04660;product=formate C-acetyltransferase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 990338 991195 . - . ID=gene-PUW31_04665;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=PUW31_04665 CP118128.1 Protein Homology CDS 990338 991195 . - 0 ID=cds-WJH09524.1;Parent=gene-PUW31_04665;Dbxref=NCBI_GP:WJH09524.1;Name=WJH09524.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459949.1;locus_tag=PUW31_04665;product=formate transporter FocA;protein_id=WJH09524.1;transl_table=11 CP118128.1 Genbank gene 991600 993360 . - . ID=gene-PUW31_04670;Name=PUW31_04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04670 CP118128.1 Protein Homology CDS 991600 993360 . - 0 ID=cds-WJH09525.1;Parent=gene-PUW31_04670;Dbxref=NCBI_GP:WJH09525.1;Name=WJH09525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459950.1;locus_tag=PUW31_04670;product=30S ribosomal protein S12 methylthiotransferase accessory protein YcaO;protein_id=WJH09525.1;transl_table=11 CP118128.1 Genbank gene 993497 994189 . + . ID=gene-PUW31_04675;Name=PUW31_04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04675 CP118128.1 Protein Homology CDS 993497 994189 . + 0 ID=cds-WJH09526.1;Parent=gene-PUW31_04675;Dbxref=NCBI_GP:WJH09526.1;Name=WJH09526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459951.1;locus_tag=PUW31_04675;product=DUF421 domain-containing protein;protein_id=WJH09526.1;transl_table=11 CP118128.1 Genbank pseudogene 994375 995462 . + . ID=gene-PUW31_04680;Name=serC;gbkey=Gene;gene=serC;gene_biotype=pseudogene;locus_tag=PUW31_04680;pseudo=true CP118128.1 Protein Homology CDS 994375 995462 . + 0 ID=cds-PUW31_04680;Parent=gene-PUW31_04680;Note=frameshifted;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459952.1;locus_tag=PUW31_04680;product=3-phosphoserine/phosphohydroxythreonine transaminase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 995533 996816 . + . ID=gene-PUW31_04685;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=PUW31_04685 CP118128.1 Protein Homology CDS 995533 996816 . + 0 ID=cds-WJH09527.1;Parent=gene-PUW31_04685;Dbxref=NCBI_GP:WJH09527.1;Name=WJH09527.1;Ontology_term=GO:0009423,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459953.1;locus_tag=PUW31_04685;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WJH09527.1;transl_table=11 CP118128.1 Genbank gene 996959 997720 . + . ID=gene-PUW31_04690;Name=PUW31_04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04690 CP118128.1 Protein Homology CDS 996959 997720 . + 0 ID=cds-WJH09528.1;Parent=gene-PUW31_04690;Dbxref=NCBI_GP:WJH09528.1;Name=WJH09528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459954.1;locus_tag=PUW31_04690;product=M48 family metallopeptidase;protein_id=WJH09528.1;transl_table=11 CP118128.1 Genbank gene 997893 998576 . + . ID=gene-PUW31_04695;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=PUW31_04695 CP118128.1 Protein Homology CDS 997893 998576 . + 0 ID=cds-WJH09529.1;Parent=gene-PUW31_04695;Dbxref=NCBI_GP:WJH09529.1;Name=WJH09529.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=PUW31_04695;product=(d)CMP kinase;protein_id=WJH09529.1;transl_table=11 CP118128.1 Genbank gene 998690 1000363 . + . ID=gene-PUW31_04700;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=PUW31_04700 CP118128.1 Protein Homology CDS 998690 1000363 . + 0 ID=cds-WJH09530.1;Parent=gene-PUW31_04700;Dbxref=NCBI_GP:WJH09530.1;Name=WJH09530.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=PUW31_04700;product=30S ribosomal protein S1;protein_id=WJH09530.1;transl_table=11 CP118128.1 Genbank gene 1000519 1000803 . + . ID=gene-PUW31_04705;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=PUW31_04705 CP118128.1 Protein Homology CDS 1000519 1000803 . + 0 ID=cds-WJH09531.1;Parent=gene-PUW31_04705;Dbxref=NCBI_GP:WJH09531.1;Name=WJH09531.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677;gbkey=CDS;gene=ihfB;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=PUW31_04705;product=integration host factor subunit beta;protein_id=WJH09531.1;transl_table=11 CP118128.1 Genbank gene 1001033 1003297 . + . ID=gene-PUW31_04710;Name=PUW31_04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04710 CP118128.1 Protein Homology CDS 1001033 1003297 . + 0 ID=cds-WJH09532.1;Parent=gene-PUW31_04710;Dbxref=NCBI_GP:WJH09532.1;Name=WJH09532.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459958.1;locus_tag=PUW31_04710;product=ComEC family protein;protein_id=WJH09532.1;transl_table=11 CP118128.1 Genbank gene 1003334 1005082 . + . ID=gene-PUW31_04715;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=PUW31_04715 CP118128.1 Protein Homology CDS 1003334 1005082 . + 0 ID=cds-WJH09533.1;Parent=gene-PUW31_04715;Dbxref=NCBI_GP:WJH09533.1;Name=WJH09533.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459959.1;locus_tag=PUW31_04715;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WJH09533.1;transl_table=11 CP118128.1 Genbank gene 1005079 1006056 . + . ID=gene-PUW31_04720;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=PUW31_04720 CP118128.1 Protein Homology CDS 1005079 1006056 . + 0 ID=cds-WJH09534.1;Parent=gene-PUW31_04720;Dbxref=NCBI_GP:WJH09534.1;Name=WJH09534.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459960.1;locus_tag=PUW31_04720;product=tetraacyldisaccharide 4'-kinase;protein_id=WJH09534.1;transl_table=11 CP118128.1 Genbank gene 1006105 1007331 . + . ID=gene-PUW31_04725;Name=PUW31_04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04725 CP118128.1 Protein Homology CDS 1006105 1007331 . + 0 ID=cds-WJH10668.1;Parent=gene-PUW31_04725;Dbxref=NCBI_GP:WJH10668.1;Name=WJH10668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459961.1;locus_tag=PUW31_04725;product=winged helix-turn-helix domain-containing protein;protein_id=WJH10668.1;transl_table=11 CP118128.1 Genbank gene 1007383 1007565 . + . ID=gene-PUW31_04730;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=PUW31_04730 CP118128.1 Protein Homology CDS 1007383 1007565 . + 0 ID=cds-WJH09535.1;Parent=gene-PUW31_04730;Dbxref=NCBI_GP:WJH09535.1;Name=WJH09535.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459962.1;locus_tag=PUW31_04730;product=protein YcaR;protein_id=WJH09535.1;transl_table=11 CP118128.1 Genbank gene 1007562 1008308 . + . ID=gene-PUW31_04735;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=PUW31_04735 CP118128.1 Protein Homology CDS 1007562 1008308 . + 0 ID=cds-WJH09536.1;Parent=gene-PUW31_04735;Dbxref=NCBI_GP:WJH09536.1;Name=WJH09536.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459963.1;locus_tag=PUW31_04735;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WJH09536.1;transl_table=11 CP118128.1 Genbank gene 1008519 1009412 . + . ID=gene-PUW31_04740;Name=PUW31_04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04740 CP118128.1 Protein Homology CDS 1008519 1009412 . + 0 ID=cds-WJH09537.1;Parent=gene-PUW31_04740;Dbxref=NCBI_GP:WJH09537.1;Name=WJH09537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459964.1;locus_tag=PUW31_04740;product=YcbJ family phosphotransferase;protein_id=WJH09537.1;transl_table=11 CP118128.1 Genbank gene 1009392 1010168 . - . ID=gene-PUW31_04745;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=PUW31_04745 CP118128.1 Protein Homology CDS 1009392 1010168 . - 0 ID=cds-WJH09538.1;Parent=gene-PUW31_04745;Dbxref=NCBI_GP:WJH09538.1;Name=WJH09538.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459965.1;locus_tag=PUW31_04745;product=envelope biogenesis factor ElyC;protein_id=WJH09538.1;transl_table=11 CP118128.1 Genbank gene 1010304 1011107 . + . ID=gene-PUW31_04750;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=PUW31_04750 CP118128.1 Protein Homology CDS 1010304 1011107 . + 0 ID=cds-WJH09539.1;Parent=gene-PUW31_04750;Dbxref=NCBI_GP:WJH09539.1;Name=WJH09539.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459966.1;locus_tag=PUW31_04750;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WJH09539.1;transl_table=11 CP118128.1 Genbank gene 1011100 1012422 . + . ID=gene-PUW31_04755;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=PUW31_04755 CP118128.1 Protein Homology CDS 1011100 1012422 . + 0 ID=cds-WJH09540.1;Parent=gene-PUW31_04755;Dbxref=NCBI_GP:WJH09540.1;Name=WJH09540.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=PUW31_04755;product=chromosome partition protein MukF;protein_id=WJH09540.1;transl_table=11 CP118128.1 Genbank gene 1012403 1013107 . + . ID=gene-PUW31_04760;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=PUW31_04760 CP118128.1 Protein Homology CDS 1012403 1013107 . + 0 ID=cds-WJH09541.1;Parent=gene-PUW31_04760;Dbxref=NCBI_GP:WJH09541.1;Name=WJH09541.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459968.1;locus_tag=PUW31_04760;product=chromosome partition protein MukE;protein_id=WJH09541.1;transl_table=11 CP118128.1 Genbank gene 1013107 1017573 . + . ID=gene-PUW31_04765;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=PUW31_04765 CP118128.1 Protein Homology CDS 1013107 1017573 . + 0 ID=cds-WJH09542.1;Parent=gene-PUW31_04765;Dbxref=NCBI_GP:WJH09542.1;Name=WJH09542.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459969.1;locus_tag=PUW31_04765;product=chromosome partition protein MukB;protein_id=WJH09542.1;transl_table=11 CP118128.1 Genbank gene 1017918 1019768 . + . ID=gene-PUW31_04770;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=PUW31_04770 CP118128.1 Protein Homology CDS 1017918 1019768 . + 0 ID=cds-WJH09543.1;Parent=gene-PUW31_04770;Dbxref=NCBI_GP:WJH09543.1;Name=WJH09543.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459970.1;locus_tag=PUW31_04770;product=L%2CD-transpeptidase;protein_id=WJH09543.1;transl_table=11 CP118128.1 Genbank gene 1020028 1020576 . + . ID=gene-PUW31_04775;Name=PUW31_04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04775 CP118128.1 Protein Homology CDS 1020028 1020576 . + 0 ID=cds-WJH09544.1;Parent=gene-PUW31_04775;Dbxref=NCBI_GP:WJH09544.1;Name=WJH09544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459971.1;locus_tag=PUW31_04775;product=YcbK family protein;protein_id=WJH09544.1;transl_table=11 CP118128.1 Genbank gene 1020604 1021251 . + . ID=gene-PUW31_04780;Name=PUW31_04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04780 CP118128.1 Protein Homology CDS 1020604 1021251 . + 0 ID=cds-WJH09545.1;Parent=gene-PUW31_04780;Dbxref=NCBI_GP:WJH09545.1;Name=WJH09545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=PUW31_04780;product=MBL fold metallo-hydrolase;protein_id=WJH09545.1;transl_table=11 CP118128.1 Genbank pseudogene 1021313 1022502 . - . ID=gene-PUW31_04785;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=pseudogene;locus_tag=PUW31_04785;pseudo=true CP118128.1 Protein Homology CDS 1021313 1022502 . - 0 ID=cds-PUW31_04785;Parent=gene-PUW31_04785;Note=frameshifted;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=PUW31_04785;product=aspartate transaminase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1022687 1023778 . - . ID=gene-PUW31_04790;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=PUW31_04790 CP118128.1 Protein Homology CDS 1022687 1023778 . - 0 ID=cds-WJH09546.1;Parent=gene-PUW31_04790;Dbxref=NCBI_GP:WJH09546.1;Name=WJH09546.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459974.1;locus_tag=PUW31_04790;product=porin OmpF;protein_id=WJH09546.1;transl_table=11 CP118128.1 Genbank gene 1024372 1025772 . - . ID=gene-PUW31_04795;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=PUW31_04795 CP118128.1 Protein Homology CDS 1024372 1025772 . - 0 ID=cds-WJH09547.1;Parent=gene-PUW31_04795;Dbxref=NCBI_GP:WJH09547.1;Name=WJH09547.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=PUW31_04795;product=asparagine--tRNA ligase;protein_id=WJH09547.1;transl_table=11 CP118128.1 Genbank gene 1025973 1026434 . - . ID=gene-PUW31_04800;Name=PUW31_04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04800 CP118128.1 Protein Homology CDS 1025973 1026434 . - 0 ID=cds-WJH09548.1;Parent=gene-PUW31_04800;Dbxref=NCBI_GP:WJH09548.1;Name=WJH09548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459976.1;locus_tag=PUW31_04800;product=Lrp/AsnC family transcriptional regulator;protein_id=WJH09548.1;transl_table=11 CP118128.1 Genbank gene 1026752 1027966 . + . ID=gene-PUW31_04805;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=PUW31_04805 CP118128.1 Protein Homology CDS 1026752 1027966 . + 0 ID=cds-WJH09549.1;Parent=gene-PUW31_04805;Dbxref=NCBI_GP:WJH09549.1;Name=WJH09549.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459977.1;locus_tag=PUW31_04805;product=diaminopropionate ammonia-lyase;protein_id=WJH09549.1;transl_table=11 CP118128.1 Genbank gene 1028210 1029646 . + . ID=gene-PUW31_04810;Name=PUW31_04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04810 CP118128.1 Protein Homology CDS 1028210 1029646 . + 0 ID=cds-WJH09550.1;Parent=gene-PUW31_04810;Dbxref=NCBI_GP:WJH09550.1;Name=WJH09550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459978.1;locus_tag=PUW31_04810;product=sodium:alanine symporter family protein;protein_id=WJH09550.1;transl_table=11 CP118128.1 Genbank gene 1029724 1030926 . - . ID=gene-PUW31_04815;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=PUW31_04815 CP118128.1 Protein Homology CDS 1029724 1030926 . - 0 ID=cds-WJH09551.1;Parent=gene-PUW31_04815;Dbxref=NCBI_GP:WJH09551.1;Name=WJH09551.1;Ontology_term=GO:0019358,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=nicotinate nucleotide salvage|0019358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459979.1;locus_tag=PUW31_04815;product=nicotinate phosphoribosyltransferase;protein_id=WJH09551.1;transl_table=11 CP118128.1 Genbank gene 1031193 1033805 . + . ID=gene-PUW31_04820;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=PUW31_04820 CP118128.1 Protein Homology CDS 1031193 1033805 . + 0 ID=cds-WJH09552.1;Parent=gene-PUW31_04820;Dbxref=NCBI_GP:WJH09552.1;Name=WJH09552.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=PUW31_04820;product=aminopeptidase N;protein_id=WJH09552.1;transl_table=11 CP118128.1 Genbank gene 1034013 1035023 . + . ID=gene-PUW31_04825;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=PUW31_04825 CP118128.1 Protein Homology CDS 1034013 1035023 . + 0 ID=cds-WJH09553.1;Parent=gene-PUW31_04825;Dbxref=NCBI_GP:WJH09553.1;Name=WJH09553.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460032.1;locus_tag=PUW31_04825;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WJH09553.1;transl_table=11 CP118128.1 Genbank gene 1035189 1035731 . + . ID=gene-PUW31_04830;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=PUW31_04830 CP118128.1 Protein Homology CDS 1035189 1035731 . + 0 ID=cds-WJH09554.1;Parent=gene-PUW31_04830;Dbxref=NCBI_GP:WJH09554.1;Name=WJH09554.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460033.1;locus_tag=PUW31_04830;product=cell division protein ZapC;protein_id=WJH09554.1;transl_table=11 CP118128.1 Genbank pseudogene 1035728 1036836 . - . ID=gene-PUW31_04835;Name=PUW31_04835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_04835;pseudo=true CP118128.1 Protein Homology CDS 1035728 1036836 . - 0 ID=cds-PUW31_04835;Parent=gene-PUW31_04835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460034.1;locus_tag=PUW31_04835;product=YcbX family protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 1036935 1039042 . + . ID=gene-PUW31_04840;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=pseudogene;locus_tag=PUW31_04840;pseudo=true CP118128.1 Protein Homology CDS 1036935 1039042 . + 0 ID=cds-PUW31_04840;Parent=gene-PUW31_04840;Note=frameshifted;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: protein motif:HMM:NF008748.0;locus_tag=PUW31_04840;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1039055 1040962 . + . ID=gene-PUW31_04845;Name=PUW31_04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04845 CP118128.1 Protein Homology CDS 1039055 1040962 . + 0 ID=cds-WJH09555.1;Parent=gene-PUW31_04845;Dbxref=NCBI_GP:WJH09555.1;Name=WJH09555.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=PUW31_04845;product=ABC transporter ATP-binding protein;protein_id=WJH09555.1;transl_table=11 CP118128.1 Genbank gene 1040977 1042230 . + . ID=gene-PUW31_04850;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=PUW31_04850 CP118128.1 Protein Homology CDS 1040977 1042230 . + 0 ID=cds-WJH09556.1;Parent=gene-PUW31_04850;Dbxref=NCBI_GP:WJH09556.1;Name=WJH09556.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460037.1;locus_tag=PUW31_04850;product=membrane integrity-associated transporter subunit PqiA;protein_id=WJH09556.1;transl_table=11 CP118128.1 Genbank gene 1042235 1043875 . + . ID=gene-PUW31_04855;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=PUW31_04855 CP118128.1 Protein Homology CDS 1042235 1043875 . + 0 ID=cds-WJH09557.1;Parent=gene-PUW31_04855;Dbxref=NCBI_GP:WJH09557.1;Name=WJH09557.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460038.1;locus_tag=PUW31_04855;product=intermembrane transport protein PqiB;protein_id=WJH09557.1;transl_table=11 CP118128.1 Genbank gene 1043872 1044435 . + . ID=gene-PUW31_04860;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=PUW31_04860 CP118128.1 Protein Homology CDS 1043872 1044435 . + 0 ID=cds-WJH09558.1;Parent=gene-PUW31_04860;Dbxref=NCBI_GP:WJH09558.1;Name=WJH09558.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460039.1;locus_tag=PUW31_04860;product=membrane integrity-associated transporter subunit PqiC;protein_id=WJH09558.1;transl_table=11 CP118128.1 Genbank gene 1044691 1044858 . + . ID=gene-PUW31_04865;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=PUW31_04865 CP118128.1 Protein Homology CDS 1044691 1044858 . + 0 ID=cds-WJH09559.1;Parent=gene-PUW31_04865;Dbxref=NCBI_GP:WJH09559.1;Name=WJH09559.1;gbkey=CDS;gene=rmf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460040.1;locus_tag=PUW31_04865;product=ribosome modulation factor;protein_id=WJH09559.1;transl_table=11 CP118128.1 Genbank gene 1044958 1045476 . - . ID=gene-PUW31_04870;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=PUW31_04870 CP118128.1 Protein Homology CDS 1044958 1045476 . - 0 ID=cds-WJH09560.1;Parent=gene-PUW31_04870;Dbxref=NCBI_GP:WJH09560.1;Name=WJH09560.1;Ontology_term=GO:0006633,GO:0008693;gbkey=CDS;gene=fabA;go_function=3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity|0008693||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=PUW31_04870;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WJH09560.1;transl_table=11 CP118128.1 Genbank gene 1045545 1047305 . - . ID=gene-PUW31_04875;Name=PUW31_04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04875 CP118128.1 Protein Homology CDS 1045545 1047305 . - 0 ID=cds-WJH09561.1;Parent=gene-PUW31_04875;Dbxref=NCBI_GP:WJH09561.1;Name=WJH09561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460042.1;locus_tag=PUW31_04875;product=Lon protease family protein;protein_id=WJH09561.1;transl_table=11 CP118128.1 Genbank gene 1047491 1047943 . + . ID=gene-PUW31_04880;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=PUW31_04880 CP118128.1 Protein Homology CDS 1047491 1047943 . + 0 ID=cds-WJH09562.1;Parent=gene-PUW31_04880;Dbxref=NCBI_GP:WJH09562.1;Name=WJH09562.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460043.1;locus_tag=PUW31_04880;product=macrodomain Ter protein MatP;protein_id=WJH09562.1;transl_table=11 CP118128.1 Genbank gene 1048015 1049067 . - . ID=gene-PUW31_04885;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=PUW31_04885 CP118128.1 Protein Homology CDS 1048015 1049067 . - 0 ID=cds-WJH09563.1;Parent=gene-PUW31_04885;Dbxref=NCBI_GP:WJH09563.1;Name=WJH09563.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460044.1;locus_tag=PUW31_04885;product=porin OmpA;protein_id=WJH09563.1;transl_table=11 CP118128.1 Genbank gene 1049424 1049933 . - . ID=gene-PUW31_04890;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=PUW31_04890 CP118128.1 Protein Homology CDS 1049424 1049933 . - 0 ID=cds-WJH09564.1;Parent=gene-PUW31_04890;Dbxref=NCBI_GP:WJH09564.1;Name=WJH09564.1;gbkey=CDS;gene=sulA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460045.1;locus_tag=PUW31_04890;product=cell division inhibitor SulA;protein_id=WJH09564.1;transl_table=11 CP118128.1 Genbank gene 1050150 1050755 . + . ID=gene-PUW31_04895;Name=PUW31_04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04895 CP118128.1 Protein Homology CDS 1050150 1050755 . + 0 ID=cds-WJH09565.1;Parent=gene-PUW31_04895;Dbxref=NCBI_GP:WJH09565.1;Name=WJH09565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460046.1;locus_tag=PUW31_04895;product=TfoX/Sxy family DNA transformation protein;protein_id=WJH09565.1;transl_table=11 CP118128.1 Genbank gene 1050742 1052895 . - . ID=gene-PUW31_04900;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=PUW31_04900 CP118128.1 Protein Homology CDS 1050742 1052895 . - 0 ID=cds-WJH09566.1;Parent=gene-PUW31_04900;Dbxref=NCBI_GP:WJH09566.1;Name=WJH09566.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460047.1;locus_tag=PUW31_04900;product=YccS family putative transporter;protein_id=WJH09566.1;transl_table=11 CP118128.1 Genbank gene 1052914 1053360 . - . ID=gene-PUW31_04905;Name=PUW31_04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04905 CP118128.1 Protein Homology CDS 1052914 1053360 . - 0 ID=cds-WJH09567.1;Parent=gene-PUW31_04905;Dbxref=NCBI_GP:WJH09567.1;Name=WJH09567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460048.1;locus_tag=PUW31_04905;product=YccF domain-containing protein;protein_id=WJH09567.1;transl_table=11 CP118128.1 Genbank gene 1053484 1055538 . + . ID=gene-PUW31_04910;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=PUW31_04910 CP118128.1 Protein Homology CDS 1053484 1055538 . + 0 ID=cds-WJH09568.1;Parent=gene-PUW31_04910;Dbxref=NCBI_GP:WJH09568.1;Name=WJH09568.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460049.1;locus_tag=PUW31_04910;product=DNA helicase IV;protein_id=WJH09568.1;transl_table=11 CP118128.1 Genbank gene 1055574 1056032 . - . ID=gene-PUW31_04915;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=PUW31_04915 CP118128.1 Protein Homology CDS 1055574 1056032 . - 0 ID=cds-WJH09569.1;Parent=gene-PUW31_04915;Dbxref=NCBI_GP:WJH09569.1;Name=WJH09569.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460050.1;locus_tag=PUW31_04915;product=methylglyoxal synthase;protein_id=WJH09569.1;transl_table=11 CP118128.1 Genbank pseudogene 1056127 1056462 . - . ID=gene-PUW31_04920;Name=PUW31_04920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_04920;pseudo=true CP118128.1 Protein Homology CDS 1056127 1056462 . - 0 ID=cds-PUW31_04920;Parent=gene-PUW31_04920;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021358.2;locus_tag=PUW31_04920;product=DUF2057 family protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1056405 1056788 . - . ID=gene-PUW31_04925;Name=PUW31_04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04925 CP118128.1 Protein Homology CDS 1056405 1056788 . - 0 ID=cds-WJH09570.1;Parent=gene-PUW31_04925;Dbxref=NCBI_GP:WJH09570.1;Name=WJH09570.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF002967.0;locus_tag=PUW31_04925;product=DUF2057 family protein;protein_id=WJH09570.1;transl_table=11 CP118128.1 Genbank gene 1056962 1057375 . + . ID=gene-PUW31_04930;Name=PUW31_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04930 CP118128.1 Protein Homology CDS 1056962 1057375 . + 0 ID=cds-WJH10669.1;Parent=gene-PUW31_04930;Dbxref=NCBI_GP:WJH10669.1;Name=WJH10669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309076.1;locus_tag=PUW31_04930;product=CoA-binding protein;protein_id=WJH10669.1;transl_table=11 CP118128.1 Genbank gene 1057420 1057737 . - . ID=gene-PUW31_04935;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=PUW31_04935 CP118128.1 Protein Homology CDS 1057420 1057737 . - 0 ID=cds-WJH09571.1;Parent=gene-PUW31_04935;Dbxref=NCBI_GP:WJH09571.1;Name=WJH09571.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=PUW31_04935;product=heat shock protein HspQ;protein_id=WJH09571.1;transl_table=11 CP118128.1 Genbank gene 1057795 1059006 . - . ID=gene-PUW31_04940;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=PUW31_04940 CP118128.1 Protein Homology CDS 1057795 1059006 . - 0 ID=cds-WJH09572.1;Parent=gene-PUW31_04940;Dbxref=NCBI_GP:WJH09572.1;Name=WJH09572.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460054.1;locus_tag=PUW31_04940;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WJH09572.1;transl_table=11 CP118128.1 Genbank gene 1059221 1059769 . + . ID=gene-PUW31_04945;Name=PUW31_04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04945 CP118128.1 Protein Homology CDS 1059221 1059769 . + 0 ID=cds-WJH09573.1;Parent=gene-PUW31_04945;Dbxref=NCBI_GP:WJH09573.1;Name=WJH09573.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460055.1;locus_tag=PUW31_04945;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WJH09573.1;transl_table=11 CP118128.1 Genbank gene 1059795 1060574 . + . ID=gene-PUW31_04950;Name=PUW31_04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04950 CP118128.1 Protein Homology CDS 1059795 1060574 . + 0 ID=cds-WJH09574.1;Parent=gene-PUW31_04950;Dbxref=NCBI_GP:WJH09574.1;Name=WJH09574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460056.1;locus_tag=PUW31_04950;product=AraC family transcriptional regulator;protein_id=WJH09574.1;transl_table=11 CP118128.1 Genbank gene 1060623 1060904 . + . ID=gene-PUW31_04955;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=PUW31_04955 CP118128.1 Protein Homology CDS 1060623 1060904 . + 0 ID=cds-WJH09575.1;Parent=gene-PUW31_04955;Dbxref=NCBI_GP:WJH09575.1;Name=WJH09575.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460057.1;locus_tag=PUW31_04955;product=acylphosphatase;protein_id=WJH09575.1;transl_table=11 CP118128.1 Genbank gene 1060901 1061230 . - . ID=gene-PUW31_04960;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=PUW31_04960 CP118128.1 Protein Homology CDS 1060901 1061230 . - 0 ID=cds-WJH09576.1;Parent=gene-PUW31_04960;Dbxref=NCBI_GP:WJH09576.1;Name=WJH09576.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460058.1;locus_tag=PUW31_04960;product=sulfurtransferase TusE;protein_id=WJH09576.1;transl_table=11 CP118128.1 Genbank gene 1061317 1061976 . - . ID=gene-PUW31_04965;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=PUW31_04965 CP118128.1 Protein Homology CDS 1061317 1061976 . - 0 ID=cds-WJH09577.1;Parent=gene-PUW31_04965;Dbxref=NCBI_GP:WJH09577.1;Name=WJH09577.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=PUW31_04965;product=FtsH protease modulator YccA;protein_id=WJH09577.1;transl_table=11 CP118128.1 Genbank gene 1062371 1062458 . + . ID=gene-PUW31_04970;Name=PUW31_04970;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_04970 CP118128.1 tRNAscan-SE tRNA 1062371 1062458 . + . ID=rna-PUW31_04970;Parent=gene-PUW31_04970;anticodon=(pos:1062405..1062407);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_04970;product=tRNA-Ser CP118128.1 tRNAscan-SE exon 1062371 1062458 . + . ID=exon-PUW31_04970-1;Parent=rna-PUW31_04970;anticodon=(pos:1062405..1062407);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_04970;product=tRNA-Ser CP118128.1 Genbank gene 1062595 1063275 . - . ID=gene-PUW31_04975;Name=pipA;gbkey=Gene;gene=pipA;gene_biotype=protein_coding;locus_tag=PUW31_04975 CP118128.1 Protein Homology CDS 1062595 1063275 . - 0 ID=cds-WJH09578.1;Parent=gene-PUW31_04975;Dbxref=NCBI_GP:WJH09578.1;Name=WJH09578.1;gbkey=CDS;gene=pipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460060.1;locus_tag=PUW31_04975;product=type III secretion system effector protease PipA;protein_id=WJH09578.1;transl_table=11 CP118128.1 Genbank gene 1063495 1064370 . - . ID=gene-PUW31_04980;Name=pipB;gbkey=Gene;gene=pipB;gene_biotype=protein_coding;locus_tag=PUW31_04980 CP118128.1 Protein Homology CDS 1063495 1064370 . - 0 ID=cds-WJH09579.1;Parent=gene-PUW31_04980;Dbxref=NCBI_GP:WJH09579.1;Name=WJH09579.1;gbkey=CDS;gene=pipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460061.1;locus_tag=PUW31_04980;product=SPI-2 type III secretion system effector PipB;protein_id=WJH09579.1;transl_table=11 CP118128.1 Genbank gene 1064588 1064908 . + . ID=gene-PUW31_04985;Name=PUW31_04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_04985 CP118128.1 Protein Homology CDS 1064588 1064908 . + 0 ID=cds-WJH09580.1;Parent=gene-PUW31_04985;Dbxref=NCBI_GP:WJH09580.1;Name=WJH09580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460062.1;locus_tag=PUW31_04985;product=hypothetical protein;protein_id=WJH09580.1;transl_table=11 CP118128.1 Genbank gene 1064918 1065259 . - . ID=gene-PUW31_04990;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=PUW31_04990 CP118128.1 Protein Homology CDS 1064918 1065259 . - 0 ID=cds-WJH09581.1;Parent=gene-PUW31_04990;Dbxref=NCBI_GP:WJH09581.1;Name=WJH09581.1;gbkey=CDS;gene=sigE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460063.1;locus_tag=PUW31_04990;product=type III secretion system chaperone SigE;protein_id=WJH09581.1;transl_table=11 CP118128.1 Genbank gene 1065276 1066961 . - . ID=gene-PUW31_04995;Name=sopB;gbkey=Gene;gene=sopB;gene_biotype=protein_coding;locus_tag=PUW31_04995 CP118128.1 Protein Homology CDS 1065276 1066961 . - 0 ID=cds-WJH10670.1;Parent=gene-PUW31_04995;Dbxref=NCBI_GP:WJH10670.1;Name=WJH10670.1;gbkey=CDS;gene=sopB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460064.1;locus_tag=PUW31_04995;product=SPI-1 type III secretion system effector inositol phosphate phosphatase SopB;protein_id=WJH10670.1;transl_table=11 CP118128.1 Genbank gene 1067293 1067463 . + . ID=gene-PUW31_05000;Name=PUW31_05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05000 CP118128.1 Protein Homology CDS 1067293 1067463 . + 0 ID=cds-WJH09582.1;Parent=gene-PUW31_05000;Dbxref=NCBI_GP:WJH09582.1;Name=WJH09582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460065.1;locus_tag=PUW31_05000;product=YlcI/YnfO family protein;protein_id=WJH09582.1;transl_table=11 CP118128.1 Genbank gene 1067464 1067574 . - . ID=gene-PUW31_05005;Name=PUW31_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05005 CP118128.1 Protein Homology CDS 1067464 1067574 . - 0 ID=cds-WJH09583.1;Parent=gene-PUW31_05005;Dbxref=NCBI_GP:WJH09583.1;Name=WJH09583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447525.1;locus_tag=PUW31_05005;product=hypothetical protein;protein_id=WJH09583.1;transl_table=11 CP118128.1 Genbank gene 1067683 1069152 . - . ID=gene-PUW31_05010;Name=PUW31_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05010 CP118128.1 Protein Homology CDS 1067683 1069152 . - 0 ID=cds-WJH09584.1;Parent=gene-PUW31_05010;Dbxref=NCBI_GP:WJH09584.1;Name=WJH09584.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460067.1;locus_tag=PUW31_05010;product=C69 family dipeptidase;protein_id=WJH09584.1;transl_table=11 CP118128.1 Genbank gene 1069325 1070689 . - . ID=gene-PUW31_05015;Name=PUW31_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05015 CP118128.1 Protein Homology CDS 1069325 1070689 . - 0 ID=cds-WJH09585.1;Parent=gene-PUW31_05015;Dbxref=NCBI_GP:WJH09585.1;Name=WJH09585.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447527.1;locus_tag=PUW31_05015;product=heavy metal sensor histidine kinase;protein_id=WJH09585.1;transl_table=11 CP118128.1 Genbank gene 1070682 1071362 . - . ID=gene-PUW31_05020;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=PUW31_05020 CP118128.1 Protein Homology CDS 1070682 1071362 . - 0 ID=cds-WJH09586.1;Parent=gene-PUW31_05020;Dbxref=NCBI_GP:WJH09586.1;Name=WJH09586.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698203.1;locus_tag=PUW31_05020;product=response regulator transcription factor HprR;protein_id=WJH09586.1;transl_table=11 CP118128.1 Genbank gene 1071498 1071908 . + . ID=gene-PUW31_05025;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=PUW31_05025 CP118128.1 Protein Homology CDS 1071498 1071908 . + 0 ID=cds-WJH09587.1;Parent=gene-PUW31_05025;Dbxref=NCBI_GP:WJH09587.1;Name=WJH09587.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460070.1;locus_tag=PUW31_05025;product=hydroxyisourate hydrolase;protein_id=WJH09587.1;transl_table=11 CP118128.1 Genbank gene 1072241 1072753 . - . ID=gene-PUW31_05030;Name=PUW31_05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05030 CP118128.1 Protein Homology CDS 1072241 1072753 . - 0 ID=cds-WJH09588.1;Parent=gene-PUW31_05030;Dbxref=NCBI_GP:WJH09588.1;Name=WJH09588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460071.1;locus_tag=PUW31_05030;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=WJH09588.1;transl_table=11 CP118128.1 Genbank gene 1072771 1074333 . - . ID=gene-PUW31_05035;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=PUW31_05035 CP118128.1 Protein Homology CDS 1072771 1074333 . - 0 ID=cds-WJH09589.1;Parent=gene-PUW31_05035;Dbxref=NCBI_GP:WJH09589.1;Name=WJH09589.1;gbkey=CDS;gene=hpaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=PUW31_05035;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WJH09589.1;transl_table=11 CP118128.1 Genbank gene 1074551 1074991 . - . ID=gene-PUW31_05040;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=PUW31_05040 CP118128.1 Protein Homology CDS 1074551 1074991 . - 0 ID=cds-WJH09590.1;Parent=gene-PUW31_05040;Dbxref=NCBI_GP:WJH09590.1;Name=WJH09590.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460073.1;locus_tag=PUW31_05040;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WJH09590.1;transl_table=11 CP118128.1 Genbank gene 1075266 1076555 . + . ID=gene-PUW31_05045;Name=hpaG;gbkey=Gene;gene=hpaG;gene_biotype=protein_coding;locus_tag=PUW31_05045 CP118128.1 Protein Homology CDS 1075266 1076555 . + 0 ID=cds-WJH09591.1;Parent=gene-PUW31_05045;Dbxref=NCBI_GP:WJH09591.1;Name=WJH09591.1;Ontology_term=GO:1901023,GO:0008704,GO:0018800;gbkey=CDS;gene=hpaG;go_function=5-carboxymethyl-2-hydroxymuconate delta-isomerase activity|0008704||IEA,5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase activity|0018800||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460074.1;locus_tag=PUW31_05045;product=4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase;protein_id=WJH09591.1;transl_table=11 CP118128.1 Genbank pseudogene 1076552 1078017 . + . ID=gene-PUW31_05050;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=pseudogene;locus_tag=PUW31_05050;pseudo=true CP118128.1 Protein Homology CDS 1076552 1078017 . + 0 ID=cds-PUW31_05050;Parent=gene-PUW31_05050;Note=frameshifted;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460075.1;locus_tag=PUW31_05050;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1078019 1078870 . + . ID=gene-PUW31_05055;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=PUW31_05055 CP118128.1 Protein Homology CDS 1078019 1078870 . + 0 ID=cds-WJH09592.1;Parent=gene-PUW31_05055;Dbxref=NCBI_GP:WJH09592.1;Name=WJH09592.1;Ontology_term=GO:0006725,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=cellular aromatic compound metabolic process|0006725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460076.1;locus_tag=PUW31_05055;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WJH09592.1;transl_table=11 CP118128.1 Genbank gene 1078880 1079260 . + . ID=gene-PUW31_05060;Name=PUW31_05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05060 CP118128.1 Protein Homology CDS 1078880 1079260 . + 0 ID=cds-WJH09593.1;Parent=gene-PUW31_05060;Dbxref=NCBI_GP:WJH09593.1;Name=WJH09593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460077.1;locus_tag=PUW31_05060;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WJH09593.1;transl_table=11 CP118128.1 Genbank gene 1079403 1080206 . + . ID=gene-PUW31_05065;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=PUW31_05065 CP118128.1 Protein Homology CDS 1079403 1080206 . + 0 ID=cds-WJH09594.1;Parent=gene-PUW31_05065;Dbxref=NCBI_GP:WJH09594.1;Name=WJH09594.1;Ontology_term=GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460078.1;locus_tag=PUW31_05065;product=2-oxo-hepta-3-ene-1%2C7-dioic acid hydratase;protein_id=WJH09594.1;transl_table=11 CP118128.1 Genbank gene 1080217 1081008 . + . ID=gene-PUW31_05070;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=PUW31_05070 CP118128.1 Protein Homology CDS 1080217 1081008 . + 0 ID=cds-WJH09595.1;Parent=gene-PUW31_05070;Dbxref=NCBI_GP:WJH09595.1;Name=WJH09595.1;Ontology_term=GO:0018802;gbkey=CDS;gene=hpaI;go_function=2%2C4-dihydroxyhept-2-ene-1%2C7-dioate aldolase activity|0018802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460079.1;locus_tag=PUW31_05070;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WJH09595.1;transl_table=11 CP118128.1 Genbank gene 1081080 1082456 . + . ID=gene-PUW31_05075;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=PUW31_05075 CP118128.1 Protein Homology CDS 1081080 1082456 . + 0 ID=cds-WJH09596.1;Parent=gene-PUW31_05075;Dbxref=NCBI_GP:WJH09596.1;Name=WJH09596.1;Ontology_term=GO:0055085,GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=transmembrane transport|0055085||IEA,4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=PUW31_05075;product=4-hydroxyphenylacetate permease;protein_id=WJH09596.1;transl_table=11 CP118128.1 Genbank gene 1082466 1083362 . + . ID=gene-PUW31_05080;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=PUW31_05080 CP118128.1 Protein Homology CDS 1082466 1083362 . + 0 ID=cds-WJH09597.1;Parent=gene-PUW31_05080;Dbxref=NCBI_GP:WJH09597.1;Name=WJH09597.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460081.1;locus_tag=PUW31_05080;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=WJH09597.1;transl_table=11 CP118128.1 Genbank gene 1083376 1084314 . + . ID=gene-PUW31_05085;Name=PUW31_05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05085 CP118128.1 Protein Homology CDS 1083376 1084314 . + 0 ID=cds-WJH09598.1;Parent=gene-PUW31_05085;Dbxref=NCBI_GP:WJH09598.1;Name=WJH09598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460082.1;locus_tag=PUW31_05085;product=MBL fold metallo-hydrolase;protein_id=WJH09598.1;transl_table=11 CP118128.1 Genbank gene 1084722 1085084 . - . ID=gene-PUW31_05090;Name=iraM;gbkey=Gene;gene=iraM;gene_biotype=protein_coding;locus_tag=PUW31_05090 CP118128.1 Protein Homology CDS 1084722 1085084 . - 0 ID=cds-WJH09599.1;Parent=gene-PUW31_05090;Dbxref=NCBI_GP:WJH09599.1;Name=WJH09599.1;gbkey=CDS;gene=iraM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460083.1;locus_tag=PUW31_05090;product=anti-adapter protein IraM;protein_id=WJH09599.1;transl_table=11 CP118128.1 Genbank gene 1085738 1086043 . - . ID=gene-PUW31_05095;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=PUW31_05095 CP118128.1 Protein Homology CDS 1085738 1086043 . - 0 ID=cds-WJH09600.1;Parent=gene-PUW31_05095;Dbxref=NCBI_GP:WJH09600.1;Name=WJH09600.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460084.1;locus_tag=PUW31_05095;product=chaperone modulator CbpM;protein_id=WJH09600.1;transl_table=11 CP118128.1 Genbank gene 1086043 1086963 . - . ID=gene-PUW31_05100;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=PUW31_05100 CP118128.1 Protein Homology CDS 1086043 1086963 . - 0 ID=cds-WJH09601.1;Parent=gene-PUW31_05100;Dbxref=NCBI_GP:WJH09601.1;Name=WJH09601.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460085.1;locus_tag=PUW31_05100;product=curved DNA-binding protein;protein_id=WJH09601.1;transl_table=11 CP118128.1 Genbank gene 1087199 1087561 . + . ID=gene-PUW31_05105;Name=PUW31_05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05105 CP118128.1 Protein Homology CDS 1087199 1087561 . + 0 ID=cds-WJH09602.1;Parent=gene-PUW31_05105;Dbxref=NCBI_GP:WJH09602.1;Name=WJH09602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460086.1;locus_tag=PUW31_05105;product=copper resistance protein;protein_id=WJH09602.1;transl_table=11 CP118128.1 Genbank gene 1087610 1089496 . + . ID=gene-PUW31_05110;Name=PUW31_05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05110 CP118128.1 Protein Homology CDS 1087610 1089496 . + 0 ID=cds-WJH09603.1;Parent=gene-PUW31_05110;Dbxref=NCBI_GP:WJH09603.1;Name=WJH09603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460087.1;locus_tag=PUW31_05110;product=protein-disulfide reductase DsbD family protein;protein_id=WJH09603.1;transl_table=11 CP118128.1 Genbank gene 1089493 1090116 . + . ID=gene-PUW31_05115;Name=PUW31_05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05115 CP118128.1 Protein Homology CDS 1089493 1090116 . + 0 ID=cds-WJH09604.1;Parent=gene-PUW31_05115;Dbxref=NCBI_GP:WJH09604.1;Name=WJH09604.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460088.1;locus_tag=PUW31_05115;product=DsbA family protein;protein_id=WJH09604.1;transl_table=11 CP118128.1 Genbank pseudogene 1090106 1090611 . + . ID=gene-PUW31_05120;Name=PUW31_05120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_05120;pseudo=true CP118128.1 Protein Homology CDS 1090106 1090611 . + 0 ID=cds-PUW31_05120;Parent=gene-PUW31_05120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460089.1;locus_tag=PUW31_05120;product=protein disulfide oxidoreductase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1090744 1091985 . + . ID=gene-PUW31_05125;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=PUW31_05125 CP118128.1 Protein Homology CDS 1090744 1091985 . + 0 ID=cds-WJH09605.1;Parent=gene-PUW31_05125;Dbxref=NCBI_GP:WJH09605.1;Name=WJH09605.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460090.1;locus_tag=PUW31_05125;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WJH09605.1;transl_table=11 CP118128.1 Genbank pseudogene 1092019 1092245 . - . ID=gene-PUW31_05130;Name=PUW31_05130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_05130;pseudo=true CP118128.1 Protein Homology CDS 1092019 1092245 . - 0 ID=cds-PUW31_05130;Parent=gene-PUW31_05130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=PUW31_05130;product=YccJ family protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1092266 1092862 . - . ID=gene-PUW31_05135;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=PUW31_05135 CP118128.1 Protein Homology CDS 1092266 1092862 . - 0 ID=cds-WJH09606.1;Parent=gene-PUW31_05135;Dbxref=NCBI_GP:WJH09606.1;Name=WJH09606.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460092.1;locus_tag=PUW31_05135;product=NAD(P)H:quinone oxidoreductase;protein_id=WJH09606.1;transl_table=11 CP118128.1 Genbank gene 1093247 1093414 . + . ID=gene-PUW31_05140;Name=PUW31_05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05140 CP118128.1 Protein Homology CDS 1093247 1093414 . + 0 ID=cds-WJH09607.1;Parent=gene-PUW31_05140;Dbxref=NCBI_GP:WJH09607.1;Name=WJH09607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460093.1;locus_tag=PUW31_05140;product=general stress protein;protein_id=WJH09607.1;transl_table=11 CP118128.1 Genbank pseudogene 1093441 1093833 . + . ID=gene-PUW31_05145;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=pseudogene;locus_tag=PUW31_05145;pseudo=true CP118128.1 Protein Homology CDS 1093441 1093833 . + 0 ID=cds-PUW31_05145;Parent=gene-PUW31_05145;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460094.1;locus_tag=PUW31_05145;product=HTH-type transcriptional regulator RutR;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1093830 1094225 . - . ID=gene-PUW31_05150;Name=PUW31_05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05150 CP118128.1 Protein Homology CDS 1093830 1094225 . - 0 ID=cds-WJH09608.1;Parent=gene-PUW31_05150;Dbxref=NCBI_GP:WJH09608.1;Name=WJH09608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460095.1;locus_tag=PUW31_05150;product=lysozyme inhibitor LprI family protein;protein_id=WJH09608.1;transl_table=11 CP118128.1 Genbank pseudogene 1094284 1098245 . - . ID=gene-PUW31_05155;Name=putA;gbkey=Gene;gene=putA;gene_biotype=pseudogene;locus_tag=PUW31_05155;pseudo=true CP118128.1 Protein Homology CDS 1094284 1098245 . - 0 ID=cds-PUW31_05155;Parent=gene-PUW31_05155;Note=frameshifted;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447555.1;locus_tag=PUW31_05155;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1098667 1100175 . + . ID=gene-PUW31_05160;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=PUW31_05160 CP118128.1 Protein Homology CDS 1098667 1100175 . + 0 ID=cds-WJH09609.1;Parent=gene-PUW31_05160;Dbxref=NCBI_GP:WJH09609.1;Name=WJH09609.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460097.1;locus_tag=PUW31_05160;product=sodium/proline symporter PutP;protein_id=WJH09609.1;transl_table=11 CP118128.1 Genbank gene 1101067 1101855 . + . ID=gene-PUW31_05165;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=PUW31_05165 CP118128.1 Protein Homology CDS 1101067 1101855 . + 0 ID=cds-WJH09610.1;Parent=gene-PUW31_05165;Dbxref=NCBI_GP:WJH09610.1;Name=WJH09610.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=PUW31_05165;product=phosphate starvation-inducible protein PhoH;protein_id=WJH09610.1;transl_table=11 CP118128.1 Genbank gene 1101961 1102842 . - . ID=gene-PUW31_05170;Name=PUW31_05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05170 CP118128.1 Protein Homology CDS 1101961 1102842 . - 0 ID=cds-WJH09611.1;Parent=gene-PUW31_05170;Dbxref=NCBI_GP:WJH09611.1;Name=WJH09611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460099.1;locus_tag=PUW31_05170;product=MurR/RpiR family transcriptional regulator;protein_id=WJH09611.1;transl_table=11 CP118128.1 Genbank gene 1103128 1104624 . - . ID=gene-PUW31_05175;Name=PUW31_05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05175 CP118128.1 Protein Homology CDS 1103128 1104624 . - 0 ID=cds-WJH09612.1;Parent=gene-PUW31_05175;Dbxref=NCBI_GP:WJH09612.1;Name=WJH09612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460100.1;locus_tag=PUW31_05175;product=sodium:solute symporter;protein_id=WJH09612.1;transl_table=11 CP118128.1 Genbank gene 1104961 1105641 . - . ID=gene-PUW31_05180;Name=PUW31_05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05180 CP118128.1 Protein Homology CDS 1104961 1105641 . - 0 ID=cds-WJH09613.1;Parent=gene-PUW31_05180;Dbxref=NCBI_GP:WJH09613.1;Name=WJH09613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460101.1;locus_tag=PUW31_05180;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WJH09613.1;transl_table=11 CP118128.1 Genbank pseudogene 1106147 1107300 . + . ID=gene-PUW31_05185;Name=PUW31_05185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_05185;pseudo=true CP118128.1 Protein Homology CDS 1106147 1107300 . + 0 ID=cds-PUW31_05185;Parent=gene-PUW31_05185;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460102.1;locus_tag=PUW31_05185;product=N-acetylneuraminate epimerase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1107346 1108038 . + . ID=gene-PUW31_05190;Name=PUW31_05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05190 CP118128.1 Protein Homology CDS 1107346 1108038 . + 0 ID=cds-WJH09614.1;Parent=gene-PUW31_05190;Dbxref=NCBI_GP:WJH09614.1;Name=WJH09614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460103.1;locus_tag=PUW31_05190;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WJH09614.1;transl_table=11 CP118128.1 Genbank gene 1108321 1109601 . + . ID=gene-PUW31_05195;Name=PUW31_05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05195 CP118128.1 Protein Homology CDS 1108321 1109601 . + 0 ID=cds-WJH09615.1;Parent=gene-PUW31_05195;Dbxref=NCBI_GP:WJH09615.1;Name=WJH09615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460104.1;locus_tag=PUW31_05195;product=MFS transporter;protein_id=WJH09615.1;transl_table=11 CP118128.1 Genbank pseudogene 1109612 1110718 . + . ID=gene-PUW31_05200;Name=PUW31_05200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_05200;pseudo=true CP118128.1 Protein Homology CDS 1109612 1110718 . + 0 ID=cds-PUW31_05200;Parent=gene-PUW31_05200;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460105.1;locus_tag=PUW31_05200;product=Gfo/Idh/MocA family oxidoreductase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1110885 1111178 . - . ID=gene-PUW31_05205;Name=PUW31_05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05205 CP118128.1 Protein Homology CDS 1110885 1111178 . - 0 ID=cds-WJH09616.1;Parent=gene-PUW31_05205;Dbxref=NCBI_GP:WJH09616.1;Name=WJH09616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806398.1;locus_tag=PUW31_05205;product=YciI family protein;protein_id=WJH09616.1;transl_table=11 CP118128.1 Genbank gene 1111209 1111427 . + . ID=gene-PUW31_05210;Name=PUW31_05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05210 CP118128.1 Protein Homology CDS 1111209 1111427 . + 0 ID=cds-WJH09617.1;Parent=gene-PUW31_05210;Dbxref=NCBI_GP:WJH09617.1;Name=WJH09617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000880618.1;locus_tag=PUW31_05210;product=hypothetical protein;protein_id=WJH09617.1;transl_table=11 CP118128.1 Genbank gene 1112028 1112486 . - . ID=gene-PUW31_05215;Name=PUW31_05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05215 CP118128.1 Protein Homology CDS 1112028 1112486 . - 0 ID=cds-WJH09618.1;Parent=gene-PUW31_05215;Dbxref=NCBI_GP:WJH09618.1;Name=WJH09618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000623372.1;locus_tag=PUW31_05215;product=DUF1311 domain-containing protein;protein_id=WJH09618.1;transl_table=11 CP118128.1 Genbank gene 1112610 1112981 . - . ID=gene-PUW31_05220;Name=PUW31_05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05220 CP118128.1 Protein Homology CDS 1112610 1112981 . - 0 ID=cds-WJH09619.1;Parent=gene-PUW31_05220;Dbxref=NCBI_GP:WJH09619.1;Name=WJH09619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747240.1;locus_tag=PUW31_05220;product=hypothetical protein;protein_id=WJH09619.1;transl_table=11 CP118128.1 Genbank gene 1112990 1113313 . - . ID=gene-PUW31_05225;Name=PUW31_05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05225 CP118128.1 GeneMarkS-2+ CDS 1112990 1113313 . - 0 ID=cds-WJH09620.1;Parent=gene-PUW31_05225;Dbxref=NCBI_GP:WJH09620.1;Name=WJH09620.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_05225;product=DUF1311 domain-containing protein;protein_id=WJH09620.1;transl_table=11 CP118128.1 Genbank gene 1113449 1114321 . - . ID=gene-PUW31_05230;Name=PUW31_05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05230 CP118128.1 Protein Homology CDS 1113449 1114321 . - 0 ID=cds-WJH09621.1;Parent=gene-PUW31_05230;Dbxref=NCBI_GP:WJH09621.1;Name=WJH09621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712141.1;locus_tag=PUW31_05230;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WJH09621.1;transl_table=11 CP118128.1 Genbank gene 1114354 1114833 . - . ID=gene-PUW31_05235;Name=PUW31_05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05235 CP118128.1 Protein Homology CDS 1114354 1114833 . - 0 ID=cds-WJH09622.1;Parent=gene-PUW31_05235;Dbxref=NCBI_GP:WJH09622.1;Name=WJH09622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284963.1;locus_tag=PUW31_05235;product=Hcp family type VI secretion system effector;protein_id=WJH09622.1;transl_table=11 CP118128.1 Genbank gene 1114821 1116215 . - . ID=gene-PUW31_05240;Name=PUW31_05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05240 CP118128.1 Protein Homology CDS 1114821 1116215 . - 0 ID=cds-WJH09623.1;Parent=gene-PUW31_05240;Dbxref=NCBI_GP:WJH09623.1;Name=WJH09623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000076067.1;locus_tag=PUW31_05240;product=VasL domain-containing protein;protein_id=WJH09623.1;transl_table=11 CP118128.1 Genbank gene 1116226 1119687 . - . ID=gene-PUW31_05245;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=PUW31_05245 CP118128.1 Protein Homology CDS 1116226 1119687 . - 0 ID=cds-WJH10671.1;Parent=gene-PUW31_05245;Dbxref=NCBI_GP:WJH10671.1;Name=WJH10671.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssM;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003914744.1;locus_tag=PUW31_05245;product=type VI secretion system membrane subunit TssM;protein_id=WJH10671.1;transl_table=11 CP118128.1 Genbank gene 1119766 1121151 . - . ID=gene-PUW31_05250;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=PUW31_05250 CP118128.1 Protein Homology CDS 1119766 1121151 . - 0 ID=cds-WJH10672.1;Parent=gene-PUW31_05250;Dbxref=NCBI_GP:WJH10672.1;Name=WJH10672.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001752219.1;locus_tag=PUW31_05250;product=type VI secretion system protein TssA;protein_id=WJH10672.1;transl_table=11 CP118128.1 Genbank gene 1121180 1121917 . - . ID=gene-PUW31_05255;Name=vasI;gbkey=Gene;gene=vasI;gene_biotype=protein_coding;locus_tag=PUW31_05255 CP118128.1 Protein Homology CDS 1121180 1121917 . - 0 ID=cds-WJH09624.1;Parent=gene-PUW31_05255;Dbxref=NCBI_GP:WJH09624.1;Name=WJH09624.1;gbkey=CDS;gene=vasI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089149.1;locus_tag=PUW31_05255;product=type VI secretion system-associated protein VasI;protein_id=WJH09624.1;transl_table=11 CP118128.1 Genbank gene 1121914 1124577 . - . ID=gene-PUW31_05260;Name=PUW31_05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05260 CP118128.1 Protein Homology CDS 1121914 1124577 . - 0 ID=cds-WJH09625.1;Parent=gene-PUW31_05260;Dbxref=NCBI_GP:WJH09625.1;Name=WJH09625.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000614299.1;locus_tag=PUW31_05260;product=AAA family ATPase;protein_id=WJH09625.1;transl_table=11 CP118128.1 Genbank gene 1124590 1125348 . - . ID=gene-PUW31_05265;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=PUW31_05265 CP118128.1 Protein Homology CDS 1124590 1125348 . - 0 ID=cds-WJH09626.1;Parent=gene-PUW31_05265;Dbxref=NCBI_GP:WJH09626.1;Name=WJH09626.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343977.1;locus_tag=PUW31_05265;product=type IVB secretion system protein IcmH/DotU;protein_id=WJH09626.1;transl_table=11 CP118128.1 Genbank gene 1125353 1126684 . - . ID=gene-PUW31_05270;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=PUW31_05270 CP118128.1 Protein Homology CDS 1125353 1126684 . - 0 ID=cds-WJH09627.1;Parent=gene-PUW31_05270;Dbxref=NCBI_GP:WJH09627.1;Name=WJH09627.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308252.1;locus_tag=PUW31_05270;product=type VI secretion system baseplate subunit TssK;protein_id=WJH09627.1;transl_table=11 CP118128.1 Genbank gene 1126687 1127220 . - . ID=gene-PUW31_05275;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=PUW31_05275 CP118128.1 Protein Homology CDS 1126687 1127220 . - 0 ID=cds-WJH09628.1;Parent=gene-PUW31_05275;Dbxref=NCBI_GP:WJH09628.1;Name=WJH09628.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssJ;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001013424.1;locus_tag=PUW31_05275;product=type VI secretion system lipoprotein TssJ;protein_id=WJH09628.1;transl_table=11 CP118128.1 Genbank gene 1127217 1128503 . - . ID=gene-PUW31_05280;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=PUW31_05280 CP118128.1 Protein Homology CDS 1127217 1128503 . - 0 ID=cds-WJH09629.1;Parent=gene-PUW31_05280;Dbxref=NCBI_GP:WJH09629.1;Name=WJH09629.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tagH;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308254.1;locus_tag=PUW31_05280;product=type VI secretion system-associated FHA domain protein TagH;protein_id=WJH09629.1;transl_table=11 CP118128.1 Genbank gene 1128528 1129616 . - . ID=gene-PUW31_05285;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=PUW31_05285 CP118128.1 Protein Homology CDS 1128528 1129616 . - 0 ID=cds-WJH09630.1;Parent=gene-PUW31_05285;Dbxref=NCBI_GP:WJH09630.1;Name=WJH09630.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509052.1;locus_tag=PUW31_05285;product=type VI secretion system baseplate subunit TssG;protein_id=WJH09630.1;transl_table=11 CP118128.1 Genbank gene 1129580 1131433 . - . ID=gene-PUW31_05290;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=PUW31_05290 CP118128.1 Protein Homology CDS 1129580 1131433 . - 0 ID=cds-WJH09631.1;Parent=gene-PUW31_05290;Dbxref=NCBI_GP:WJH09631.1;Name=WJH09631.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssF;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308256.1;locus_tag=PUW31_05290;product=type VI secretion system baseplate subunit TssF;protein_id=WJH09631.1;transl_table=11 CP118128.1 Genbank gene 1131438 1131854 . - . ID=gene-PUW31_05295;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=PUW31_05295 CP118128.1 Protein Homology CDS 1131438 1131854 . - 0 ID=cds-WJH09632.1;Parent=gene-PUW31_05295;Dbxref=NCBI_GP:WJH09632.1;Name=WJH09632.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssE;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686004.1;locus_tag=PUW31_05295;product=type VI secretion system baseplate subunit TssE;protein_id=WJH09632.1;transl_table=11 CP118128.1 Genbank gene 1131851 1133323 . - . ID=gene-PUW31_05300;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=PUW31_05300 CP118128.1 Protein Homology CDS 1131851 1133323 . - 0 ID=cds-WJH09633.1;Parent=gene-PUW31_05300;Dbxref=NCBI_GP:WJH09633.1;Name=WJH09633.1;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000056998.1;locus_tag=PUW31_05300;product=type VI secretion system contractile sheath large subunit;protein_id=WJH09633.1;transl_table=11 CP118128.1 Genbank gene 1133614 1134117 . - . ID=gene-PUW31_05305;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=PUW31_05305 CP118128.1 Protein Homology CDS 1133614 1134117 . - 0 ID=cds-WJH09634.1;Parent=gene-PUW31_05305;Dbxref=NCBI_GP:WJH09634.1;Name=WJH09634.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssB;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308260.1;locus_tag=PUW31_05305;product=type VI secretion system contractile sheath small subunit;protein_id=WJH09634.1;transl_table=11 CP118128.1 Genbank gene 1134747 1135265 . + . ID=gene-PUW31_05310;Name=PUW31_05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05310 CP118128.1 Protein Homology CDS 1134747 1135265 . + 0 ID=cds-WJH09635.1;Parent=gene-PUW31_05310;Dbxref=NCBI_GP:WJH09635.1;Name=WJH09635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308261.1;locus_tag=PUW31_05310;product=Hcp family type VI secretion system effector;protein_id=WJH09635.1;transl_table=11 CP118128.1 Genbank gene 1135487 1137598 . + . ID=gene-PUW31_05315;Name=PUW31_05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05315 CP118128.1 Protein Homology CDS 1135487 1137598 . + 0 ID=cds-WJH09636.1;Parent=gene-PUW31_05315;Dbxref=NCBI_GP:WJH09636.1;Name=WJH09636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000103445.1;locus_tag=PUW31_05315;product=type VI secretion system tip protein VgrG;protein_id=WJH09636.1;transl_table=11 CP118128.1 Genbank pseudogene 1137700 1141511 . + . ID=gene-PUW31_05320;Name=PUW31_05320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_05320;pseudo=true CP118128.1 Protein Homology CDS 1137700 1141511 . + 0 ID=cds-PUW31_05320;Parent=gene-PUW31_05320;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001530200.1;locus_tag=PUW31_05320;product=DUF6531 domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1141515 1142096 . + . ID=gene-PUW31_05325;Name=PUW31_05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05325 CP118128.1 GeneMarkS-2+ CDS 1141515 1142096 . + 0 ID=cds-WJH10821.1;Parent=gene-PUW31_05325;Dbxref=NCBI_GP:WJH10821.1;Name=WJH10821.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_05325;product=hypothetical protein;protein_id=WJH10821.1;transl_table=11 CP118128.1 Genbank gene 1142289 1142492 . + . ID=gene-PUW31_05330;Name=PUW31_05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05330 CP118128.1 GeneMarkS-2+ CDS 1142289 1142492 . + 0 ID=cds-WJH09637.1;Parent=gene-PUW31_05330;Dbxref=NCBI_GP:WJH09637.1;Name=WJH09637.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_05330;product=hypothetical protein;protein_id=WJH09637.1;transl_table=11 CP118128.1 Genbank gene 1142911 1147068 . + . ID=gene-PUW31_05335;Name=PUW31_05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05335 CP118128.1 Protein Homology CDS 1142911 1147068 . + 0 ID=cds-WJH09638.1;Parent=gene-PUW31_05335;Dbxref=NCBI_GP:WJH09638.1;Name=WJH09638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509054.1;locus_tag=PUW31_05335;product=RHS element core protein;protein_id=WJH09638.1;transl_table=11 CP118128.1 Genbank gene 1147596 1148156 . + . ID=gene-PUW31_05340;Name=PUW31_05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05340 CP118128.1 Protein Homology CDS 1147596 1148156 . + 0 ID=cds-WJH10673.1;Parent=gene-PUW31_05340;Dbxref=NCBI_GP:WJH10673.1;Name=WJH10673.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03696.1;locus_tag=PUW31_05340;product=hypothetical protein;protein_id=WJH10673.1;transl_table=11 CP118128.1 Genbank gene 1148224 1148676 . + . ID=gene-PUW31_05345;Name=PUW31_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05345 CP118128.1 Protein Homology CDS 1148224 1148676 . + 0 ID=cds-WJH09639.1;Parent=gene-PUW31_05345;Dbxref=NCBI_GP:WJH09639.1;Name=WJH09639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675351.1;locus_tag=PUW31_05345;product=tetratricopeptide repeat protein;protein_id=WJH09639.1;transl_table=11 CP118128.1 Genbank gene 1148739 1148999 . + . ID=gene-PUW31_05350;Name=PUW31_05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05350 CP118128.1 Protein Homology CDS 1148739 1148999 . + 0 ID=cds-WJH09640.1;Parent=gene-PUW31_05350;Dbxref=NCBI_GP:WJH09640.1;Name=WJH09640.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019843.2;locus_tag=PUW31_05350;product=hypothetical protein;protein_id=WJH09640.1;transl_table=11 CP118128.1 Genbank gene 1149057 1149188 . + . ID=gene-PUW31_05355;Name=PUW31_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05355 CP118128.1 GeneMarkS-2+ CDS 1149057 1149188 . + 0 ID=cds-WJH09641.1;Parent=gene-PUW31_05355;Dbxref=NCBI_GP:WJH09641.1;Name=WJH09641.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_05355;product=hypothetical protein;protein_id=WJH09641.1;transl_table=11 CP118128.1 Genbank pseudogene 1149382 1150531 . + . ID=gene-PUW31_05360;Name=PUW31_05360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_05360;pseudo=true CP118128.1 Protein Homology CDS 1149382 1150531 . + 0 ID=cds-PUW31_05360;Parent=gene-PUW31_05360;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=PUW31_05360;product=IS3-like element IS1230B family transposase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1150670 1151449 . - . ID=gene-PUW31_05365;Name=PUW31_05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05365 CP118128.1 Protein Homology CDS 1150670 1151449 . - 0 ID=cds-WJH09642.1;Parent=gene-PUW31_05365;Dbxref=NCBI_GP:WJH09642.1;Name=WJH09642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000686692.1;locus_tag=PUW31_05365;product=hypothetical protein;protein_id=WJH09642.1;transl_table=11 CP118128.1 Genbank gene 1151717 1151995 . + . ID=gene-PUW31_05370;Name=PUW31_05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05370 CP118128.1 Protein Homology CDS 1151717 1151995 . + 0 ID=cds-WJH09643.1;Parent=gene-PUW31_05370;Dbxref=NCBI_GP:WJH09643.1;Name=WJH09643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675348.1;locus_tag=PUW31_05370;product=hypothetical protein;protein_id=WJH09643.1;transl_table=11 CP118128.1 Genbank gene 1151992 1152369 . + . ID=gene-PUW31_05375;Name=PUW31_05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05375 CP118128.1 Protein Homology CDS 1151992 1152369 . + 0 ID=cds-WJH09644.1;Parent=gene-PUW31_05375;Dbxref=NCBI_GP:WJH09644.1;Name=WJH09644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574179.1;locus_tag=PUW31_05375;product=hypothetical protein;protein_id=WJH09644.1;transl_table=11 CP118128.1 Genbank gene 1152909 1153121 . + . ID=gene-PUW31_05380;Name=PUW31_05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05380 CP118128.1 Protein Homology CDS 1152909 1153121 . + 0 ID=cds-WJH09645.1;Parent=gene-PUW31_05380;Dbxref=NCBI_GP:WJH09645.1;Name=WJH09645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460947.1;locus_tag=PUW31_05380;product=cold-shock protein;protein_id=WJH09645.1;transl_table=11 CP118128.1 Genbank gene 1153132 1153320 . + . ID=gene-PUW31_05385;Name=PUW31_05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05385 CP118128.1 Protein Homology CDS 1153132 1153320 . + 0 ID=cds-WJH10674.1;Parent=gene-PUW31_05385;Dbxref=NCBI_GP:WJH10674.1;Name=WJH10674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518790.1;locus_tag=PUW31_05385;product=cold-shock protein;protein_id=WJH10674.1;transl_table=11 CP118128.1 Genbank gene 1153579 1154775 . - . ID=gene-PUW31_05390;Name=ompS1;gbkey=Gene;gene=ompS1;gene_biotype=protein_coding;locus_tag=PUW31_05390 CP118128.1 Protein Homology CDS 1153579 1154775 . - 0 ID=cds-WJH09646.1;Parent=gene-PUW31_05390;Dbxref=NCBI_GP:WJH09646.1;Name=WJH09646.1;gbkey=CDS;gene=ompS1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460946.1;locus_tag=PUW31_05390;product=porin OmpS1;protein_id=WJH09646.1;transl_table=11 CP118128.1 Genbank gene 1155424 1155735 . + . ID=gene-PUW31_05395;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=PUW31_05395 CP118128.1 Protein Homology CDS 1155424 1155735 . + 0 ID=cds-WJH09647.1;Parent=gene-PUW31_05395;Dbxref=NCBI_GP:WJH09647.1;Name=WJH09647.1;gbkey=CDS;gene=drpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000107428.1;locus_tag=PUW31_05395;product=cell division protein DrpB;protein_id=WJH09647.1;transl_table=11 CP118128.1 Genbank gene 1155815 1156510 . + . ID=gene-PUW31_05400;Name=PUW31_05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05400 CP118128.1 Protein Homology CDS 1155815 1156510 . + 0 ID=cds-WJH09648.1;Parent=gene-PUW31_05400;Dbxref=NCBI_GP:WJH09648.1;Name=WJH09648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460944.1;locus_tag=PUW31_05400;product=phosphohydrolase;protein_id=WJH09648.1;transl_table=11 CP118128.1 Genbank gene 1156584 1158014 . + . ID=gene-PUW31_05405;Name=PUW31_05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05405 CP118128.1 Protein Homology CDS 1156584 1158014 . + 0 ID=cds-WJH09649.1;Parent=gene-PUW31_05405;Dbxref=NCBI_GP:WJH09649.1;Name=WJH09649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460943.1;locus_tag=PUW31_05405;product=DNA cytosine methyltransferase;protein_id=WJH09649.1;transl_table=11 CP118128.1 Genbank gene 1157995 1158465 . + . ID=gene-PUW31_05410;Name=PUW31_05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05410 CP118128.1 Protein Homology CDS 1157995 1158465 . + 0 ID=cds-WJH09650.1;Parent=gene-PUW31_05410;Dbxref=NCBI_GP:WJH09650.1;Name=WJH09650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460942.1;locus_tag=PUW31_05410;product=very short patch repair endonuclease;protein_id=WJH09650.1;transl_table=11 CP118128.1 Genbank pseudogene 1158454 1159369 . - . ID=gene-PUW31_05415;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=pseudogene;locus_tag=PUW31_05415;pseudo=true CP118128.1 Protein Homology CDS 1158454 1159369 . - 0 ID=cds-PUW31_05415;Parent=gene-PUW31_05415;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460941.1;locus_tag=PUW31_05415;product=drug/metabolite exporter YedA;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 1159539 1160455 . + . ID=gene-PUW31_05420;Name=PUW31_05420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_05420;pseudo=true CP118128.1 Protein Homology CDS 1159539 1160455 . + 0 ID=cds-PUW31_05420;Parent=gene-PUW31_05420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=PUW31_05420;product=DUF808 domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1160532 1160717 . + . ID=gene-PUW31_05425;Name=PUW31_05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05425 CP118128.1 Protein Homology CDS 1160532 1160717 . + 0 ID=cds-WJH09651.1;Parent=gene-PUW31_05425;Dbxref=NCBI_GP:WJH09651.1;Name=WJH09651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549490.1;locus_tag=PUW31_05425;product=YodC family protein;protein_id=WJH09651.1;transl_table=11 CP118128.1 Genbank gene 1160882 1162594 . + . ID=gene-PUW31_05430;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=PUW31_05430 CP118128.1 Protein Homology CDS 1160882 1162594 . + 0 ID=cds-WJH09652.1;Parent=gene-PUW31_05430;Dbxref=NCBI_GP:WJH09652.1;Name=WJH09652.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460938.1;locus_tag=PUW31_05430;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WJH09652.1;transl_table=11 CP118128.1 Genbank gene 1162573 1163388 . - . ID=gene-PUW31_05435;Name=PUW31_05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05435 CP118128.1 Protein Homology CDS 1162573 1163388 . - 0 ID=cds-WJH09653.1;Parent=gene-PUW31_05435;Dbxref=NCBI_GP:WJH09653.1;Name=WJH09653.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460937.1;locus_tag=PUW31_05435;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WJH09653.1;transl_table=11 CP118128.1 Genbank gene 1163698 1163925 . - . ID=gene-PUW31_05440;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=PUW31_05440 CP118128.1 Protein Homology CDS 1163698 1163925 . - 0 ID=cds-WJH09654.1;Parent=gene-PUW31_05440;Dbxref=NCBI_GP:WJH09654.1;Name=WJH09654.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460936.1;locus_tag=PUW31_05440;product=YodD family peroxide/acid resistance protein;protein_id=WJH09654.1;transl_table=11 CP118128.1 Genbank gene 1164053 1164247 . + . ID=gene-PUW31_05445;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=PUW31_05445 CP118128.1 Protein Homology CDS 1164053 1164247 . + 0 ID=cds-WJH09655.1;Parent=gene-PUW31_05445;Dbxref=NCBI_GP:WJH09655.1;Name=WJH09655.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736680.1;locus_tag=PUW31_05445;product=protein DsrB;protein_id=WJH09655.1;transl_table=11 CP118128.1 Genbank gene 1164286 1164909 . - . ID=gene-PUW31_05450;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=PUW31_05450 CP118128.1 Protein Homology CDS 1164286 1164909 . - 0 ID=cds-WJH09656.1;Parent=gene-PUW31_05450;Dbxref=NCBI_GP:WJH09656.1;Name=WJH09656.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460935.1;locus_tag=PUW31_05450;product=transcriptional regulator RcsA;protein_id=WJH09656.1;transl_table=11 CP118128.1 Genbank gene 1165191 1165985 . - . ID=gene-PUW31_05455;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=PUW31_05455 CP118128.1 Protein Homology CDS 1165191 1165985 . - 0 ID=cds-WJH09657.1;Parent=gene-PUW31_05455;Dbxref=NCBI_GP:WJH09657.1;Name=WJH09657.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460934.1;locus_tag=PUW31_05455;product=flagellar biosynthetic protein FliR;protein_id=WJH09657.1;transl_table=11 CP118128.1 Genbank gene 1165994 1166263 . - . ID=gene-PUW31_05460;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=PUW31_05460 CP118128.1 Protein Homology CDS 1165994 1166263 . - 0 ID=cds-WJH09658.1;Parent=gene-PUW31_05460;Dbxref=NCBI_GP:WJH09658.1;Name=WJH09658.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliQ;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=PUW31_05460;product=flagellar biosynthesis protein FliQ;protein_id=WJH09658.1;transl_table=11 CP118128.1 Genbank gene 1166273 1167010 . - . ID=gene-PUW31_05465;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=PUW31_05465 CP118128.1 Protein Homology CDS 1166273 1167010 . - 0 ID=cds-WJH09659.1;Parent=gene-PUW31_05465;Dbxref=NCBI_GP:WJH09659.1;Name=WJH09659.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0001539;gbkey=CDS;gene=fliP;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460932.1;locus_tag=PUW31_05465;product=flagellar type III secretion system pore protein FliP;protein_id=WJH09659.1;transl_table=11 CP118128.1 Genbank gene 1167010 1167387 . - . ID=gene-PUW31_05470;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=PUW31_05470 CP118128.1 Protein Homology CDS 1167010 1167387 . - 0 ID=cds-WJH09660.1;Parent=gene-PUW31_05470;Dbxref=NCBI_GP:WJH09660.1;Name=WJH09660.1;Ontology_term=GO:0044781;gbkey=CDS;gene=fliO;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460931.3;locus_tag=PUW31_05470;product=flagellar biosynthetic protein FliO;protein_id=WJH09660.1;transl_table=11 CP118128.1 Genbank gene 1167387 1167800 . - . ID=gene-PUW31_05475;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=PUW31_05475 CP118128.1 Protein Homology CDS 1167387 1167800 . - 0 ID=cds-WJH09661.1;Parent=gene-PUW31_05475;Dbxref=NCBI_GP:WJH09661.1;Name=WJH09661.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460930.1;locus_tag=PUW31_05475;product=flagellar motor switch protein FliN;protein_id=WJH09661.1;transl_table=11 CP118128.1 Genbank gene 1167797 1168801 . - . ID=gene-PUW31_05480;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=PUW31_05480 CP118128.1 Protein Homology CDS 1167797 1168801 . - 0 ID=cds-WJH09662.1;Parent=gene-PUW31_05480;Dbxref=NCBI_GP:WJH09662.1;Name=WJH09662.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=PUW31_05480;product=flagellar motor switch protein FliM;protein_id=WJH09662.1;transl_table=11 CP118128.1 Genbank gene 1168806 1169273 . - . ID=gene-PUW31_05485;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=PUW31_05485 CP118128.1 Protein Homology CDS 1168806 1169273 . - 0 ID=cds-WJH09663.1;Parent=gene-PUW31_05485;Dbxref=NCBI_GP:WJH09663.1;Name=WJH09663.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460928.1;locus_tag=PUW31_05485;product=flagellar basal body-associated protein FliL;protein_id=WJH09663.1;transl_table=11 CP118128.1 Genbank gene 1169378 1170595 . - . ID=gene-PUW31_05490;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=PUW31_05490 CP118128.1 Protein Homology CDS 1169378 1170595 . - 0 ID=cds-WJH09664.1;Parent=gene-PUW31_05490;Dbxref=NCBI_GP:WJH09664.1;Name=WJH09664.1;Ontology_term=GO:0044780,GO:0009424;gbkey=CDS;gene=fliK;go_component=bacterial-type flagellum hook|0009424||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460927.1;locus_tag=PUW31_05490;product=flagellar hook length control protein FliK;protein_id=WJH09664.1;transl_table=11 CP118128.1 Genbank gene 1170592 1171035 . - . ID=gene-PUW31_05495;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=PUW31_05495 CP118128.1 Protein Homology CDS 1170592 1171035 . - 0 ID=cds-WJH09665.1;Parent=gene-PUW31_05495;Dbxref=NCBI_GP:WJH09665.1;Name=WJH09665.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460926.1;locus_tag=PUW31_05495;product=flagellar export protein FliJ;protein_id=WJH09665.1;transl_table=11 CP118128.1 Genbank gene 1171057 1172427 . - . ID=gene-PUW31_05500;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=PUW31_05500 CP118128.1 Protein Homology CDS 1171057 1172427 . - 0 ID=cds-WJH09666.1;Parent=gene-PUW31_05500;Dbxref=NCBI_GP:WJH09666.1;Name=WJH09666.1;Ontology_term=GO:0001539,GO:0016887,GO:0009288;gbkey=CDS;gene=fliI;go_component=bacterial-type flagellum|0009288||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460925.1;locus_tag=PUW31_05500;product=flagellar protein export ATPase FliI;protein_id=WJH09666.1;transl_table=11 CP118128.1 Genbank gene 1172427 1173134 . - . ID=gene-PUW31_05505;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=PUW31_05505 CP118128.1 Protein Homology CDS 1172427 1173134 . - 0 ID=cds-WJH09667.1;Parent=gene-PUW31_05505;Dbxref=NCBI_GP:WJH09667.1;Name=WJH09667.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460924.1;locus_tag=PUW31_05505;product=flagellar assembly protein FliH;protein_id=WJH09667.1;transl_table=11 CP118128.1 Genbank gene 1173127 1174122 . - . ID=gene-PUW31_05510;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=PUW31_05510 CP118128.1 Protein Homology CDS 1173127 1174122 . - 0 ID=cds-WJH09668.1;Parent=gene-PUW31_05510;Dbxref=NCBI_GP:WJH09668.1;Name=WJH09668.1;Ontology_term=GO:0001539,GO:0006935,GO:0005198,GO:0009433;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum basal body%2C C ring|0009433||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460923.1;locus_tag=PUW31_05510;product=flagellar motor switch protein FliG;protein_id=WJH09668.1;transl_table=11 CP118128.1 Genbank gene 1174115 1175791 . - . ID=gene-PUW31_05515;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=PUW31_05515 CP118128.1 Protein Homology CDS 1174115 1175791 . - 0 ID=cds-WJH09669.1;Parent=gene-PUW31_05515;Dbxref=NCBI_GP:WJH09669.1;Name=WJH09669.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460922.1;locus_tag=PUW31_05515;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WJH09669.1;transl_table=11 CP118128.1 Genbank gene 1176008 1176322 . + . ID=gene-PUW31_05520;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=PUW31_05520 CP118128.1 Protein Homology CDS 1176008 1176322 . + 0 ID=cds-WJH09670.1;Parent=gene-PUW31_05520;Dbxref=NCBI_GP:WJH09670.1;Name=WJH09670.1;Ontology_term=GO:0001539,GO:0005198;gbkey=CDS;gene=fliE;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460921.1;locus_tag=PUW31_05520;product=flagellar hook-basal body complex protein FliE;protein_id=WJH09670.1;transl_table=11 CP118128.1 Genbank gene 1176442 1176828 . - . ID=gene-PUW31_05525;Name=PUW31_05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05525 CP118128.1 Protein Homology CDS 1176442 1176828 . - 0 ID=cds-WJH10675.1;Parent=gene-PUW31_05525;Dbxref=NCBI_GP:WJH10675.1;Name=WJH10675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448379.1;locus_tag=PUW31_05525;product=hypothetical protein;protein_id=WJH10675.1;transl_table=11 CP118128.1 Genbank gene 1177093 1177326 . - . ID=gene-PUW31_05530;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=PUW31_05530 CP118128.1 Protein Homology CDS 1177093 1177326 . - 0 ID=cds-WJH09671.1;Parent=gene-PUW31_05530;Dbxref=NCBI_GP:WJH09671.1;Name=WJH09671.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=PUW31_05530;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WJH09671.1;transl_table=11 CP118128.1 Genbank pseudogene 1177323 1178527 . - . ID=gene-PUW31_05535;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=pseudogene;locus_tag=PUW31_05535;pseudo=true CP118128.1 Protein Homology CDS 1177323 1178527 . - 0 ID=cds-PUW31_05535;Parent=gene-PUW31_05535;Note=frameshifted;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156840.1;locus_tag=PUW31_05535;product=selenium metabolism membrane protein YedE/FdhT;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1178713 1179114 . + . ID=gene-PUW31_05540;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=PUW31_05540 CP118128.1 Protein Homology CDS 1178713 1179114 . + 0 ID=cds-WJH10676.1;Parent=gene-PUW31_05540;Dbxref=NCBI_GP:WJH10676.1;Name=WJH10676.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754693.1;locus_tag=PUW31_05540;product=lipoprotein YedD;protein_id=WJH10676.1;transl_table=11 CP118128.1 Genbank pseudogene 1179154 1180637 . - . ID=gene-PUW31_05545;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=pseudogene;locus_tag=PUW31_05545;pseudo=true CP118128.1 Protein Homology CDS 1179154 1180637 . - 0 ID=cds-PUW31_05545;Parent=gene-PUW31_05545;Note=frameshifted;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460916.1;locus_tag=PUW31_05545;product=alpha-amylase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1180709 1181077 . - . ID=gene-PUW31_05550;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=PUW31_05550 CP118128.1 Protein Homology CDS 1180709 1181077 . - 0 ID=cds-WJH09672.1;Parent=gene-PUW31_05550;Dbxref=NCBI_GP:WJH09672.1;Name=WJH09672.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460915.1;locus_tag=PUW31_05550;product=flagella biosynthesis regulatory protein FliT;protein_id=WJH09672.1;transl_table=11 CP118128.1 Genbank gene 1181077 1181484 . - . ID=gene-PUW31_05555;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=PUW31_05555 CP118128.1 Protein Homology CDS 1181077 1181484 . - 0 ID=cds-WJH09673.1;Parent=gene-PUW31_05555;Dbxref=NCBI_GP:WJH09673.1;Name=WJH09673.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliS;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460914.1;locus_tag=PUW31_05555;product=flagellar export chaperone FliS;protein_id=WJH09673.1;transl_table=11 CP118128.1 Genbank gene 1181499 1182905 . - . ID=gene-PUW31_05560;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=PUW31_05560 CP118128.1 Protein Homology CDS 1181499 1182905 . - 0 ID=cds-WJH09674.1;Parent=gene-PUW31_05560;Dbxref=NCBI_GP:WJH09674.1;Name=WJH09674.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460913.1;locus_tag=PUW31_05560;product=flagellar filament capping protein FliD;protein_id=WJH09674.1;transl_table=11 CP118128.1 Genbank gene 1182904 1183143 . + . ID=gene-PUW31_05565;Name=PUW31_05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05565 CP118128.1 GeneMarkS-2+ CDS 1182904 1183143 . + 0 ID=cds-WJH09675.1;Parent=gene-PUW31_05565;Dbxref=NCBI_GP:WJH09675.1;Name=WJH09675.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_05565;product=hypothetical protein;protein_id=WJH09675.1;transl_table=11 CP118128.1 Genbank gene 1183161 1184678 . + . ID=gene-PUW31_05570;Name=PUW31_05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05570 CP118128.1 Protein Homology CDS 1183161 1184678 . + 0 ID=cds-WJH09676.1;Parent=gene-PUW31_05570;Dbxref=NCBI_GP:WJH09676.1;Name=WJH09676.1;Ontology_term=GO:0071973,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000079837.1;locus_tag=PUW31_05570;product=flagellin;protein_id=WJH09676.1;transl_table=11 CP118128.1 Genbank gene 1184757 1185962 . + . ID=gene-PUW31_05575;Name=fliB;gbkey=Gene;gene=fliB;gene_biotype=protein_coding;locus_tag=PUW31_05575 CP118128.1 Protein Homology CDS 1184757 1185962 . + 0 ID=cds-WJH09677.1;Parent=gene-PUW31_05575;Dbxref=NCBI_GP:WJH09677.1;Name=WJH09677.1;gbkey=CDS;gene=fliB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460911.1;locus_tag=PUW31_05575;product=flagellin lysine-N-methylase;protein_id=WJH09677.1;transl_table=11 CP118128.1 Genbank gene 1186159 1186878 . + . ID=gene-PUW31_05580;Name=PUW31_05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05580 CP118128.1 Protein Homology CDS 1186159 1186878 . + 0 ID=cds-WJH09678.1;Parent=gene-PUW31_05580;Dbxref=NCBI_GP:WJH09678.1;Name=WJH09678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460909.1;locus_tag=PUW31_05580;product=RNA polymerase sigma factor FliA;protein_id=WJH09678.1;transl_table=11 CP118128.1 Genbank pseudogene 1186937 1187489 . + . ID=gene-PUW31_05585;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=pseudogene;locus_tag=PUW31_05585;pseudo=true CP118128.1 Protein Homology CDS 1186937 1187489 . + 0 ID=cds-PUW31_05585;Parent=gene-PUW31_05585;Note=frameshifted;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460908.1;locus_tag=PUW31_05585;product=flagella biosynthesis regulatory protein FliZ;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1187636 1188436 . + . ID=gene-PUW31_05590;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=PUW31_05590 CP118128.1 Protein Homology CDS 1187636 1188436 . + 0 ID=cds-WJH09679.1;Parent=gene-PUW31_05590;Dbxref=NCBI_GP:WJH09679.1;Name=WJH09679.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460907.1;locus_tag=PUW31_05590;product=cystine ABC transporter substrate-binding protein;protein_id=WJH09679.1;transl_table=11 CP118128.1 Genbank pseudogene 1188590 1189575 . + . ID=gene-PUW31_05595;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=pseudogene;locus_tag=PUW31_05595;pseudo=true CP118128.1 Protein Homology CDS 1188590 1189575 . + 0 ID=cds-PUW31_05595;Parent=gene-PUW31_05595;Note=frameshifted;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460906.1;locus_tag=PUW31_05595;product=D-cysteine desulfhydrase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1189596 1190264 . + . ID=gene-PUW31_05600;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=PUW31_05600 CP118128.1 Protein Homology CDS 1189596 1190264 . + 0 ID=cds-WJH09680.1;Parent=gene-PUW31_05600;Dbxref=NCBI_GP:WJH09680.1;Name=WJH09680.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460905.1;locus_tag=PUW31_05600;product=cystine ABC transporter permease;protein_id=WJH09680.1;transl_table=11 CP118128.1 Genbank gene 1190261 1191013 . + . ID=gene-PUW31_05605;Name=yecC;gbkey=Gene;gene=yecC;gene_biotype=protein_coding;locus_tag=PUW31_05605 CP118128.1 Protein Homology CDS 1190261 1191013 . + 0 ID=cds-WJH09681.1;Parent=gene-PUW31_05605;Dbxref=NCBI_GP:WJH09681.1;Name=WJH09681.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=yecC;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460904.1;locus_tag=PUW31_05605;product=L-cystine ABC transporter ATP-binding protein YecC;protein_id=WJH09681.1;transl_table=11 CP118128.1 Genbank gene 1191246 1191968 . + . ID=gene-PUW31_05610;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=PUW31_05610 CP118128.1 Protein Homology CDS 1191246 1191968 . + 0 ID=cds-WJH09682.1;Parent=gene-PUW31_05610;Dbxref=NCBI_GP:WJH09682.1;Name=WJH09682.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460903.1;locus_tag=PUW31_05610;product=transcriptional regulator SdiA;protein_id=WJH09682.1;transl_table=11 CP118128.1 Genbank gene 1192035 1192259 . - . ID=gene-PUW31_05615;Name=PUW31_05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05615 CP118128.1 Protein Homology CDS 1192035 1192259 . - 0 ID=cds-WJH09683.1;Parent=gene-PUW31_05615;Dbxref=NCBI_GP:WJH09683.1;Name=WJH09683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460902.1;locus_tag=PUW31_05615;product=DUF2594 family protein;protein_id=WJH09683.1;transl_table=11 CP118128.1 Genbank pseudogene 1192256 1192409 . - . ID=gene-PUW31_05620;Name=PUW31_05620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_05620;pseudo=true CP118128.1 Protein Homology CDS 1192256 1192409 . - 0 ID=cds-PUW31_05620;Parent=gene-PUW31_05620;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448360.1;locus_tag=PUW31_05620;product=hypothetical protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1192721 1193377 . + . ID=gene-PUW31_05625;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=PUW31_05625 CP118128.1 Protein Homology CDS 1192721 1193377 . + 0 ID=cds-WJH09684.1;Parent=gene-PUW31_05625;Dbxref=NCBI_GP:WJH09684.1;Name=WJH09684.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460900.1;locus_tag=PUW31_05625;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WJH09684.1;transl_table=11 CP118128.1 Genbank gene 1193374 1195206 . + . ID=gene-PUW31_05630;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=PUW31_05630 CP118128.1 Protein Homology CDS 1193374 1195206 . + 0 ID=cds-WJH09685.1;Parent=gene-PUW31_05630;Dbxref=NCBI_GP:WJH09685.1;Name=WJH09685.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460899.1;locus_tag=PUW31_05630;product=excinuclease ABC subunit UvrC;protein_id=WJH09685.1;transl_table=11 CP118128.1 Genbank gene 1195263 1195811 . + . ID=gene-PUW31_05635;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=PUW31_05635 CP118128.1 Protein Homology CDS 1195263 1195811 . + 0 ID=cds-WJH09686.1;Parent=gene-PUW31_05635;Dbxref=NCBI_GP:WJH09686.1;Name=WJH09686.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460898.1;locus_tag=PUW31_05635;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WJH09686.1;transl_table=11 CP118128.1 Genbank gene 1195963 1196038 . + . ID=gene-PUW31_05640;Name=PUW31_05640;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_05640 CP118128.1 tRNAscan-SE tRNA 1195963 1196038 . + . ID=rna-PUW31_05640;Parent=gene-PUW31_05640;anticodon=(pos:1195996..1195998);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_05640;product=tRNA-Gly CP118128.1 tRNAscan-SE exon 1195963 1196038 . + . ID=exon-PUW31_05640-1;Parent=rna-PUW31_05640;anticodon=(pos:1195996..1195998);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_05640;product=tRNA-Gly CP118128.1 Genbank gene 1196090 1196163 . + . ID=gene-PUW31_05645;Name=PUW31_05645;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_05645 CP118128.1 tRNAscan-SE tRNA 1196090 1196163 . + . ID=rna-PUW31_05645;Parent=gene-PUW31_05645;anticodon=(pos:1196122..1196124);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_05645;product=tRNA-Cys CP118128.1 tRNAscan-SE exon 1196090 1196163 . + . ID=exon-PUW31_05645-1;Parent=rna-PUW31_05645;anticodon=(pos:1196122..1196124);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_05645;product=tRNA-Cys CP118128.1 Genbank gene 1196175 1196261 . + . ID=gene-PUW31_05650;Name=PUW31_05650;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_05650 CP118128.1 tRNAscan-SE tRNA 1196175 1196261 . + . ID=rna-PUW31_05650;Parent=gene-PUW31_05650;anticodon=(pos:1196209..1196211);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_05650;product=tRNA-Leu CP118128.1 tRNAscan-SE exon 1196175 1196261 . + . ID=exon-PUW31_05650-1;Parent=rna-PUW31_05650;anticodon=(pos:1196209..1196211);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_05650;product=tRNA-Leu CP118128.1 Genbank pseudogene 1196510 1196841 . + . ID=gene-PUW31_05655;Name=PUW31_05655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_05655;pseudo=true CP118128.1 Protein Homology CDS 1196510 1196841 . + 0 ID=cds-PUW31_05655;Parent=gene-PUW31_05655;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460897.1;locus_tag=PUW31_05655;product=hypothetical protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1197055 1198494 . + . ID=gene-PUW31_05660;Name=PUW31_05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05660 CP118128.1 Protein Homology CDS 1197055 1198494 . + 0 ID=cds-WJH09687.1;Parent=gene-PUW31_05660;Dbxref=NCBI_GP:WJH09687.1;Name=WJH09687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460896.1;locus_tag=PUW31_05660;product=SH3 domain-containing protein;protein_id=WJH09687.1;transl_table=11 CP118128.1 Genbank pseudogene 1198707 1199032 . + . ID=gene-PUW31_05665;Name=PUW31_05665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_05665;pseudo=true CP118128.1 Protein Homology CDS 1198707 1199032 . + 0 ID=cds-PUW31_05665;Parent=gene-PUW31_05665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460895.1;locus_tag=PUW31_05665;product=glucose-6-phosphate dehydrogenase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1199271 1199936 . + . ID=gene-PUW31_05670;Name=PUW31_05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05670 CP118128.1 Protein Homology CDS 1199271 1199936 . + 0 ID=cds-WJH09688.1;Parent=gene-PUW31_05670;Dbxref=NCBI_GP:WJH09688.1;Name=WJH09688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460894.1;locus_tag=PUW31_05670;product=YecA family protein;protein_id=WJH09688.1;transl_table=11 CP118128.1 Genbank gene 1200011 1201231 . - . ID=gene-PUW31_05675;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=PUW31_05675 CP118128.1 Protein Homology CDS 1200011 1201231 . - 0 ID=cds-WJH09689.1;Parent=gene-PUW31_05675;Dbxref=NCBI_GP:WJH09689.1;Name=WJH09689.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460893.1;locus_tag=PUW31_05675;product=tyrosine transporter TyrP;protein_id=WJH09689.1;transl_table=11 CP118128.1 Genbank gene 1201458 1201697 . + . ID=gene-PUW31_05680;Name=PUW31_05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05680 CP118128.1 Protein Homology CDS 1201458 1201697 . + 0 ID=cds-WJH09690.1;Parent=gene-PUW31_05680;Dbxref=NCBI_GP:WJH09690.1;Name=WJH09690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460892.1;locus_tag=PUW31_05680;product=YecH family protein;protein_id=WJH09690.1;transl_table=11 CP118128.1 Genbank gene 1201743 1202240 . - . ID=gene-PUW31_05685;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=PUW31_05685 CP118128.1 Protein Homology CDS 1201743 1202240 . - 0 ID=cds-WJH09691.1;Parent=gene-PUW31_05685;Dbxref=NCBI_GP:WJH09691.1;Name=WJH09691.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=cellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920608.1;locus_tag=PUW31_05685;product=non-heme ferritin;protein_id=WJH09691.1;transl_table=11 CP118128.1 Genbank gene 1202480 1202815 . - . ID=gene-PUW31_05690;Name=PUW31_05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05690 CP118128.1 Protein Homology CDS 1202480 1202815 . - 0 ID=cds-WJH09692.1;Parent=gene-PUW31_05690;Dbxref=NCBI_GP:WJH09692.1;Name=WJH09692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460890.1;locus_tag=PUW31_05690;product=YecR-like lipofamily protein;protein_id=WJH09692.1;transl_table=11 CP118128.1 Genbank gene 1203071 1203709 . + . ID=gene-PUW31_05695;Name=PUW31_05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05695 CP118128.1 Protein Homology CDS 1203071 1203709 . + 0 ID=cds-WJH09693.1;Parent=gene-PUW31_05695;Dbxref=NCBI_GP:WJH09693.1;Name=WJH09693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460889.1;locus_tag=PUW31_05695;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WJH09693.1;transl_table=11 CP118128.1 Genbank gene 1203888 1204391 . - . ID=gene-PUW31_05700;Name=PUW31_05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05700 CP118128.1 Protein Homology CDS 1203888 1204391 . - 0 ID=cds-WJH09694.1;Parent=gene-PUW31_05700;Dbxref=NCBI_GP:WJH09694.1;Name=WJH09694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460888.1;locus_tag=PUW31_05700;product=non-heme ferritin-like protein;protein_id=WJH09694.1;transl_table=11 CP118128.1 Genbank gene 1204941 1205498 . + . ID=gene-PUW31_05705;Name=PUW31_05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05705 CP118128.1 Protein Homology CDS 1204941 1205498 . + 0 ID=cds-WJH09695.1;Parent=gene-PUW31_05705;Dbxref=NCBI_GP:WJH09695.1;Name=WJH09695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460887.1;locus_tag=PUW31_05705;product=DJ-1/PfpI family protein;protein_id=WJH09695.1;transl_table=11 CP118128.1 Genbank pseudogene 1205727 1205909 . + . ID=gene-PUW31_05710;Name=araH;gbkey=Gene;gene=araH;gene_biotype=pseudogene;locus_tag=PUW31_05710;pseudo=true CP118128.1 Protein Homology CDS 1205727 1205909 . + 0 ID=cds-PUW31_05710;Parent=gene-PUW31_05710;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707790.1;locus_tag=PUW31_05710;product=L-arabinose ABC transporter permease AraH;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1206132 1206935 . + . ID=gene-PUW31_05715;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=PUW31_05715 CP118128.1 Protein Homology CDS 1206132 1206935 . + 0 ID=cds-WJH09696.1;Parent=gene-PUW31_05715;Dbxref=NCBI_GP:WJH09696.1;Name=WJH09696.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460886.1;locus_tag=PUW31_05715;product=trehalose-phosphatase;protein_id=WJH09696.1;transl_table=11 CP118128.1 Genbank gene 1206910 1208331 . + . ID=gene-PUW31_05720;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=PUW31_05720 CP118128.1 Protein Homology CDS 1206910 1208331 . + 0 ID=cds-WJH09697.1;Parent=gene-PUW31_05720;Dbxref=NCBI_GP:WJH09697.1;Name=WJH09697.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460885.1;locus_tag=PUW31_05720;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WJH09697.1;transl_table=11 CP118128.1 Genbank gene 1208349 1208777 . - . ID=gene-PUW31_05725;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=PUW31_05725 CP118128.1 Protein Homology CDS 1208349 1208777 . - 0 ID=cds-WJH09698.1;Parent=gene-PUW31_05725;Dbxref=NCBI_GP:WJH09698.1;Name=WJH09698.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460884.1;locus_tag=PUW31_05725;product=universal stress protein UspC;protein_id=WJH09698.1;transl_table=11 CP118128.1 Genbank gene 1208774 1208890 . - . ID=gene-PUW31_05730;Name=PUW31_05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05730 CP118128.1 Protein Homology CDS 1208774 1208890 . - 0 ID=cds-WJH09699.1;Parent=gene-PUW31_05730;Dbxref=NCBI_GP:WJH09699.1;Name=WJH09699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448342.1;locus_tag=PUW31_05730;product=hypothetical protein;protein_id=WJH09699.1;transl_table=11 CP118128.1 Genbank gene 1209573 1209914 . + . ID=gene-PUW31_05735;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=PUW31_05735 CP118128.1 Protein Homology CDS 1209573 1209914 . + 0 ID=cds-WJH09700.1;Parent=gene-PUW31_05735;Dbxref=NCBI_GP:WJH09700.1;Name=WJH09700.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310629.2;locus_tag=PUW31_05735;product=flagellar transcriptional regulator FlhD;protein_id=WJH09700.1;transl_table=11 CP118128.1 Genbank gene 1209911 1210495 . + . ID=gene-PUW31_05740;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=PUW31_05740 CP118128.1 Protein Homology CDS 1209911 1210495 . + 0 ID=cds-WJH09701.1;Parent=gene-PUW31_05740;Dbxref=NCBI_GP:WJH09701.1;Name=WJH09701.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460881.3;locus_tag=PUW31_05740;product=flagellar transcriptional regulator FlhC;protein_id=WJH09701.1;transl_table=11 CP118128.1 Genbank gene 1210620 1211507 . + . ID=gene-PUW31_05745;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=PUW31_05745 CP118128.1 Protein Homology CDS 1210620 1211507 . + 0 ID=cds-WJH09702.1;Parent=gene-PUW31_05745;Dbxref=NCBI_GP:WJH09702.1;Name=WJH09702.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460880.1;locus_tag=PUW31_05745;product=flagellar motor stator protein MotA;protein_id=WJH09702.1;transl_table=11 CP118128.1 Genbank gene 1211504 1212433 . + . ID=gene-PUW31_05750;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=PUW31_05750 CP118128.1 Protein Homology CDS 1211504 1212433 . + 0 ID=cds-WJH09703.1;Parent=gene-PUW31_05750;Dbxref=NCBI_GP:WJH09703.1;Name=WJH09703.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460879.1;locus_tag=PUW31_05750;product=flagellar motor protein MotB;protein_id=WJH09703.1;transl_table=11 CP118128.1 Genbank gene 1212438 1214453 . + . ID=gene-PUW31_05755;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=PUW31_05755 CP118128.1 Protein Homology CDS 1212438 1214453 . + 0 ID=cds-WJH09704.1;Parent=gene-PUW31_05755;Dbxref=NCBI_GP:WJH09704.1;Name=WJH09704.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460878.1;locus_tag=PUW31_05755;product=chemotaxis protein CheA;protein_id=WJH09704.1;transl_table=11 CP118128.1 Genbank gene 1214474 1214977 . + . ID=gene-PUW31_05760;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=PUW31_05760 CP118128.1 Protein Homology CDS 1214474 1214977 . + 0 ID=cds-WJH09705.1;Parent=gene-PUW31_05760;Dbxref=NCBI_GP:WJH09705.1;Name=WJH09705.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460877.1;locus_tag=PUW31_05760;product=chemotaxis protein CheW;protein_id=WJH09705.1;transl_table=11 CP118128.1 Genbank pseudogene 1215214 1216873 . + . ID=gene-PUW31_05765;Name=tar;gbkey=Gene;gene=tar;gene_biotype=pseudogene;locus_tag=PUW31_05765;pseudo=true CP118128.1 Protein Homology CDS 1215214 1216873 . + 0 ID=cds-PUW31_05765;Parent=gene-PUW31_05765;Note=frameshifted;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460876.1;locus_tag=PUW31_05765;product=methyl-accepting chemotaxis protein II;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1217027 1217893 . + . ID=gene-PUW31_05770;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=PUW31_05770 CP118128.1 Protein Homology CDS 1217027 1217893 . + 0 ID=cds-WJH09706.1;Parent=gene-PUW31_05770;Dbxref=NCBI_GP:WJH09706.1;Name=WJH09706.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460875.1;locus_tag=PUW31_05770;product=protein-glutamate O-methyltransferase CheR;protein_id=WJH09706.1;transl_table=11 CP118128.1 Genbank gene 1217890 1218939 . + . ID=gene-PUW31_05775;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=PUW31_05775 CP118128.1 Protein Homology CDS 1217890 1218939 . + 0 ID=cds-WJH09707.1;Parent=gene-PUW31_05775;Dbxref=NCBI_GP:WJH09707.1;Name=WJH09707.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=PUW31_05775;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WJH09707.1;transl_table=11 CP118128.1 Genbank gene 1218957 1219346 . + . ID=gene-PUW31_05780;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=PUW31_05780 CP118128.1 Protein Homology CDS 1218957 1219346 . + 0 ID=cds-WJH09708.1;Parent=gene-PUW31_05780;Dbxref=NCBI_GP:WJH09708.1;Name=WJH09708.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=PUW31_05780;product=chemotaxis response regulator CheY;protein_id=WJH09708.1;transl_table=11 CP118128.1 Genbank pseudogene 1219357 1220000 . + . ID=gene-PUW31_05785;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=pseudogene;locus_tag=PUW31_05785;pseudo=true CP118128.1 Protein Homology CDS 1219357 1220000 . + 0 ID=cds-PUW31_05785;Parent=gene-PUW31_05785;Note=frameshifted;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460872.1;locus_tag=PUW31_05785;product=protein phosphatase CheZ;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 1220194 1221148 . + . ID=gene-PUW31_05790;Name=PUW31_05790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_05790;pseudo=true CP118128.1 Protein Homology CDS 1220194 1221148 . + 0 ID=cds-PUW31_05790;Parent=gene-PUW31_05790;Note=frameshifted;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460871.1;locus_tag=PUW31_05790;product=EscU/YscU/HrcU family type III secretion system export apparatus switch protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 1221141 1223219 . + . ID=gene-PUW31_05795;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=pseudogene;locus_tag=PUW31_05795;pseudo=true CP118128.1 Protein Homology CDS 1221141 1223219 . + 0 ID=cds-PUW31_05795;Parent=gene-PUW31_05795;Note=internal stop;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=flhA;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460870.1;locus_tag=PUW31_05795;product=flagellar biosynthesis protein FlhA;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1223219 1223611 . + . ID=gene-PUW31_05800;Name=flhe;gbkey=Gene;gene=flhe;gene_biotype=protein_coding;locus_tag=PUW31_05800 CP118128.1 Protein Homology CDS 1223219 1223611 . + 0 ID=cds-WJH09709.1;Parent=gene-PUW31_05800;Dbxref=NCBI_GP:WJH09709.1;Name=WJH09709.1;gbkey=CDS;gene=flhe;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460869.1;locus_tag=PUW31_05800;product=flagellar protein FlhE;protein_id=WJH09709.1;transl_table=11 CP118128.1 Genbank gene 1223848 1224987 . + . ID=gene-PUW31_05805;Name=PUW31_05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05805 CP118128.1 Protein Homology CDS 1223848 1224987 . + 0 ID=cds-WJH09710.1;Parent=gene-PUW31_05805;Dbxref=NCBI_GP:WJH09710.1;Name=WJH09710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460868.1;locus_tag=PUW31_05805;product=glycoside hydrolase family 105 protein;protein_id=WJH09710.1;transl_table=11 CP118128.1 Genbank pseudogene 1225041 1226911 . - . ID=gene-PUW31_05810;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=pseudogene;locus_tag=PUW31_05810;pseudo=true CP118128.1 Protein Homology CDS 1225041 1226911 . - 0 ID=cds-PUW31_05810;Parent=gene-PUW31_05810;Note=frameshifted;Ontology_term=GO:0009252,GO:0003824;gbkey=CDS;gene=mrdA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460867.1;locus_tag=PUW31_05810;product=penicillin-binding protein 2;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1227100 1228833 . - . ID=gene-PUW31_05815;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=PUW31_05815 CP118128.1 Protein Homology CDS 1227100 1228833 . - 0 ID=cds-WJH09711.1;Parent=gene-PUW31_05815;Dbxref=NCBI_GP:WJH09711.1;Name=WJH09711.1;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=PUW31_05815;product=arginine--tRNA ligase;protein_id=WJH09711.1;transl_table=11 CP118128.1 Genbank gene 1229070 1229639 . + . ID=gene-PUW31_05820;Name=PUW31_05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05820 CP118128.1 Protein Homology CDS 1229070 1229639 . + 0 ID=cds-WJH09712.1;Parent=gene-PUW31_05820;Dbxref=NCBI_GP:WJH09712.1;Name=WJH09712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460865.1;locus_tag=PUW31_05820;product=VOC family protein;protein_id=WJH09712.1;transl_table=11 CP118128.1 Genbank gene 1229659 1230405 . + . ID=gene-PUW31_05825;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=PUW31_05825 CP118128.1 Protein Homology CDS 1229659 1230405 . + 0 ID=cds-WJH09713.1;Parent=gene-PUW31_05825;Dbxref=NCBI_GP:WJH09713.1;Name=WJH09713.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460864.1;locus_tag=PUW31_05825;product=copper homeostasis protein CutC;protein_id=WJH09713.1;transl_table=11 CP118128.1 Genbank gene 1230641 1231612 . - . ID=gene-PUW31_05830;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=PUW31_05830 CP118128.1 Protein Homology CDS 1230641 1231612 . - 0 ID=cds-WJH09714.1;Parent=gene-PUW31_05830;Dbxref=NCBI_GP:WJH09714.1;Name=WJH09714.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460863.1;locus_tag=PUW31_05830;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WJH09714.1;transl_table=11 CP118128.1 Genbank gene 1231609 1232352 . - . ID=gene-PUW31_05835;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=PUW31_05835 CP118128.1 Protein Homology CDS 1231609 1232352 . - 0 ID=cds-WJH09715.1;Parent=gene-PUW31_05835;Dbxref=NCBI_GP:WJH09715.1;Name=WJH09715.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460862.1;locus_tag=PUW31_05835;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WJH09715.1;transl_table=11 CP118128.1 Genbank gene 1232393 1232788 . - . ID=gene-PUW31_05840;Name=PUW31_05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05840 CP118128.1 Protein Homology CDS 1232393 1232788 . - 0 ID=cds-WJH09716.1;Parent=gene-PUW31_05840;Dbxref=NCBI_GP:WJH09716.1;Name=WJH09716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460861.1;locus_tag=PUW31_05840;product=MAPEG family protein;protein_id=WJH09716.1;transl_table=11 CP118128.1 Genbank gene 1232841 1233659 . - . ID=gene-PUW31_05845;Name=PUW31_05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05845 CP118128.1 Protein Homology CDS 1232841 1233659 . - 0 ID=cds-WJH09717.1;Parent=gene-PUW31_05845;Dbxref=NCBI_GP:WJH09717.1;Name=WJH09717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460860.1;locus_tag=PUW31_05845;product=DUF72 domain-containing protein;protein_id=WJH09717.1;transl_table=11 CP118128.1 Genbank gene 1233656 1234222 . - . ID=gene-PUW31_05850;Name=PUW31_05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05850 CP118128.1 Protein Homology CDS 1233656 1234222 . - 0 ID=cds-WJH09718.1;Parent=gene-PUW31_05850;Dbxref=NCBI_GP:WJH09718.1;Name=WJH09718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460859.1;locus_tag=PUW31_05850;product=hydrolase;protein_id=WJH09718.1;transl_table=11 CP118128.1 Genbank gene 1234547 1236319 . + . ID=gene-PUW31_05855;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=PUW31_05855 CP118128.1 Protein Homology CDS 1234547 1236319 . + 0 ID=cds-WJH09719.1;Parent=gene-PUW31_05855;Dbxref=NCBI_GP:WJH09719.1;Name=WJH09719.1;Ontology_term=GO:0006422,GO:0004815,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460858.1;locus_tag=PUW31_05855;product=aspartate--tRNA ligase;protein_id=WJH09719.1;transl_table=11 CP118128.1 Genbank gene 1236422 1236874 . + . ID=gene-PUW31_05860;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=PUW31_05860 CP118128.1 Protein Homology CDS 1236422 1236874 . + 0 ID=cds-WJH09720.1;Parent=gene-PUW31_05860;Dbxref=NCBI_GP:WJH09720.1;Name=WJH09720.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460857.1;locus_tag=PUW31_05860;product=dihydroneopterin triphosphate diphosphatase;protein_id=WJH09720.1;transl_table=11 CP118128.1 Genbank gene 1236904 1237644 . + . ID=gene-PUW31_05865;Name=PUW31_05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05865 CP118128.1 Protein Homology CDS 1236904 1237644 . + 0 ID=cds-WJH09721.1;Parent=gene-PUW31_05865;Dbxref=NCBI_GP:WJH09721.1;Name=WJH09721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=PUW31_05865;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WJH09721.1;transl_table=11 CP118128.1 Genbank gene 1237681 1238202 . + . ID=gene-PUW31_05870;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=PUW31_05870 CP118128.1 Protein Homology CDS 1237681 1238202 . + 0 ID=cds-WJH09722.1;Parent=gene-PUW31_05870;Dbxref=NCBI_GP:WJH09722.1;Name=WJH09722.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction endodeoxyribonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=PUW31_05870;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WJH09722.1;transl_table=11 CP118128.1 Genbank gene 1238204 1238803 . - . ID=gene-PUW31_05875;Name=PUW31_05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05875 CP118128.1 Protein Homology CDS 1238204 1238803 . - 0 ID=cds-WJH09723.1;Parent=gene-PUW31_05875;Dbxref=NCBI_GP:WJH09723.1;Name=WJH09723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460854.1;locus_tag=PUW31_05875;product=YebB family permuted papain-like enzyme;protein_id=WJH09723.1;transl_table=11 CP118128.1 Genbank gene 1239012 1239704 . + . ID=gene-PUW31_05880;Name=PUW31_05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05880 CP118128.1 Protein Homology CDS 1239012 1239704 . + 0 ID=cds-WJH09724.1;Parent=gene-PUW31_05880;Dbxref=NCBI_GP:WJH09724.1;Name=WJH09724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227317.1;locus_tag=PUW31_05880;product=hypothetical protein;protein_id=WJH09724.1;transl_table=11 CP118128.1 Genbank gene 1240064 1240675 . + . ID=gene-PUW31_05885;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=PUW31_05885 CP118128.1 Protein Homology CDS 1240064 1240675 . + 0 ID=cds-WJH09725.1;Parent=gene-PUW31_05885;Dbxref=NCBI_GP:WJH09725.1;Name=WJH09725.1;Ontology_term=GO:0006310,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=four-way junction helicase activity|0009378||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=PUW31_05885;product=Holliday junction branch migration protein RuvA;protein_id=WJH09725.1;transl_table=11 CP118128.1 Genbank gene 1240684 1241694 . + . ID=gene-PUW31_05890;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=PUW31_05890 CP118128.1 Protein Homology CDS 1240684 1241694 . + 0 ID=cds-WJH09726.1;Parent=gene-PUW31_05890;Dbxref=NCBI_GP:WJH09726.1;Name=WJH09726.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460851.1;locus_tag=PUW31_05890;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WJH09726.1;transl_table=11 CP118128.1 Genbank gene 1241773 1242558 . - . ID=gene-PUW31_05895;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=PUW31_05895 CP118128.1 Protein Homology CDS 1241773 1242558 . - 0 ID=cds-WJH09727.1;Parent=gene-PUW31_05895;Dbxref=NCBI_GP:WJH09727.1;Name=WJH09727.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460850.1;locus_tag=PUW31_05895;product=zinc ABC transporter permease subunit ZnuB;protein_id=WJH09727.1;transl_table=11 CP118128.1 Genbank pseudogene 1242555 1243309 . - . ID=gene-PUW31_05900;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=pseudogene;locus_tag=PUW31_05900;pseudo=true CP118128.1 Protein Homology CDS 1242555 1243309 . - 0 ID=cds-PUW31_05900;Parent=gene-PUW31_05900;Note=frameshifted;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=PUW31_05900;product=zinc ABC transporter ATP-binding protein ZnuC;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1243388 1244332 . + . ID=gene-PUW31_05905;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=PUW31_05905 CP118128.1 Protein Homology CDS 1243388 1244332 . + 0 ID=cds-WJH09728.1;Parent=gene-PUW31_05905;Dbxref=NCBI_GP:WJH09728.1;Name=WJH09728.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=PUW31_05905;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WJH09728.1;transl_table=11 CP118128.1 Genbank gene 1244348 1245667 . + . ID=gene-PUW31_05910;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=PUW31_05910 CP118128.1 Protein Homology CDS 1244348 1245667 . + 0 ID=cds-WJH09729.1;Parent=gene-PUW31_05910;Dbxref=NCBI_GP:WJH09729.1;Name=WJH09729.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460847.1;locus_tag=PUW31_05910;product=murein DD-endopeptidase MepM;protein_id=WJH09729.1;transl_table=11 CP118128.1 Genbank gene 1245784 1246755 . + . ID=gene-PUW31_05915;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=PUW31_05915 CP118128.1 Protein Homology CDS 1245784 1246755 . + 0 ID=cds-WJH09730.1;Parent=gene-PUW31_05915;Dbxref=NCBI_GP:WJH09730.1;Name=WJH09730.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009245,GO:0016746;gbkey=CDS;gene=lpxM;go_function=acyltransferase activity|0016746||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460846.1;locus_tag=PUW31_05915;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WJH09730.1;transl_table=11 CP118128.1 Genbank gene 1246828 1248270 . - . ID=gene-PUW31_05920;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=PUW31_05920 CP118128.1 Protein Homology CDS 1246828 1248270 . - 0 ID=cds-WJH09731.1;Parent=gene-PUW31_05920;Dbxref=NCBI_GP:WJH09731.1;Name=WJH09731.1;Ontology_term=GO:0006096,GO:0004743,GO:0005737;gbkey=CDS;gene=pyk;go_component=cytoplasm|0005737||IEA;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=PUW31_05920;product=pyruvate kinase;protein_id=WJH09731.1;transl_table=11 CP118128.1 Genbank gene 1248394 1249263 . - . ID=gene-PUW31_05925;Name=PUW31_05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05925 CP118128.1 Protein Homology CDS 1248394 1249263 . - 0 ID=cds-WJH09732.1;Parent=gene-PUW31_05925;Dbxref=NCBI_GP:WJH09732.1;Name=WJH09732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460844.1;locus_tag=PUW31_05925;product=MurR/RpiR family transcriptional regulator;protein_id=WJH09732.1;transl_table=11 CP118128.1 Genbank gene 1249361 1249495 . + . ID=gene-PUW31_05930;Name=PUW31_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05930 CP118128.1 GeneMarkS-2+ CDS 1249361 1249495 . + 0 ID=cds-WJH09733.1;Parent=gene-PUW31_05930;Dbxref=NCBI_GP:WJH09733.1;Name=WJH09733.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_05930;product=hypothetical protein;protein_id=WJH09733.1;transl_table=11 CP118128.1 Genbank gene 1249604 1251079 . + . ID=gene-PUW31_05935;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=PUW31_05935 CP118128.1 Protein Homology CDS 1249604 1251079 . + 0 ID=cds-WJH09734.1;Parent=gene-PUW31_05935;Dbxref=NCBI_GP:WJH09734.1;Name=WJH09734.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=PUW31_05935;product=glucose-6-phosphate dehydrogenase;protein_id=WJH09734.1;transl_table=11 CP118128.1 Genbank gene 1251314 1253125 . + . ID=gene-PUW31_05940;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=PUW31_05940 CP118128.1 Protein Homology CDS 1251314 1253125 . + 0 ID=cds-WJH09735.1;Parent=gene-PUW31_05940;Dbxref=NCBI_GP:WJH09735.1;Name=WJH09735.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460842.1;locus_tag=PUW31_05940;product=phosphogluconate dehydratase;protein_id=WJH09735.1;transl_table=11 CP118128.1 Genbank gene 1253163 1253804 . + . ID=gene-PUW31_05945;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=PUW31_05945 CP118128.1 Protein Homology CDS 1253163 1253804 . + 0 ID=cds-WJH09736.1;Parent=gene-PUW31_05945;Dbxref=NCBI_GP:WJH09736.1;Name=WJH09736.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460841.1;locus_tag=PUW31_05945;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WJH09736.1;transl_table=11 CP118128.1 Genbank gene 1253904 1255082 . - . ID=gene-PUW31_05950;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=PUW31_05950 CP118128.1 Protein Homology CDS 1253904 1255082 . - 0 ID=cds-WJH09737.1;Parent=gene-PUW31_05950;Dbxref=NCBI_GP:WJH09737.1;Name=WJH09737.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460840.1;locus_tag=PUW31_05950;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WJH09737.1;transl_table=11 CP118128.1 Genbank gene 1255213 1255503 . + . ID=gene-PUW31_05955;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=PUW31_05955 CP118128.1 Protein Homology CDS 1255213 1255503 . + 0 ID=cds-WJH09738.1;Parent=gene-PUW31_05955;Dbxref=NCBI_GP:WJH09738.1;Name=WJH09738.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460839.1;locus_tag=PUW31_05955;product=DNA damage-inducible protein YebG;protein_id=WJH09738.1;transl_table=11 CP118128.1 Genbank gene 1255571 1255924 . + . ID=gene-PUW31_05960;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=PUW31_05960 CP118128.1 Protein Homology CDS 1255571 1255924 . + 0 ID=cds-WJH09739.1;Parent=gene-PUW31_05960;Dbxref=NCBI_GP:WJH09739.1;Name=WJH09739.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460838.1;locus_tag=PUW31_05960;product=protein YebF;protein_id=WJH09739.1;transl_table=11 CP118128.1 Genbank pseudogene 1256018 1256676 . + . ID=gene-PUW31_05965;Name=PUW31_05965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_05965;pseudo=true CP118128.1 Protein Homology CDS 1256018 1256676 . + 0 ID=cds-PUW31_05965;Parent=gene-PUW31_05965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460837.1;locus_tag=PUW31_05965;product=tellurite resistance TerB family protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1256889 1258940 . + . ID=gene-PUW31_05970;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=PUW31_05970 CP118128.1 Protein Homology CDS 1256889 1258940 . + 0 ID=cds-WJH09740.1;Parent=gene-PUW31_05970;Dbxref=NCBI_GP:WJH09740.1;Name=WJH09740.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460836.1;locus_tag=PUW31_05970;product=oligopeptidase B;protein_id=WJH09740.1;transl_table=11 CP118128.1 Genbank gene 1258977 1259675 . - . ID=gene-PUW31_05975;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=PUW31_05975 CP118128.1 Protein Homology CDS 1258977 1259675 . - 0 ID=cds-WJH09741.1;Parent=gene-PUW31_05975;Dbxref=NCBI_GP:WJH09741.1;Name=WJH09741.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460835.1;locus_tag=PUW31_05975;product=exodeoxyribonuclease X;protein_id=WJH09741.1;transl_table=11 CP118128.1 Genbank gene 1259699 1260355 . - . ID=gene-PUW31_05980;Name=PUW31_05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05980 CP118128.1 Protein Homology CDS 1259699 1260355 . - 0 ID=cds-WJH09742.1;Parent=gene-PUW31_05980;Dbxref=NCBI_GP:WJH09742.1;Name=WJH09742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460834.1;locus_tag=PUW31_05980;product=carbon-nitrogen hydrolase family protein;protein_id=WJH09742.1;transl_table=11 CP118128.1 Genbank gene 1260463 1260693 . - . ID=gene-PUW31_05985;Name=PUW31_05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_05985 CP118128.1 Protein Homology CDS 1260463 1260693 . - 0 ID=cds-WJH09743.1;Parent=gene-PUW31_05985;Dbxref=NCBI_GP:WJH09743.1;Name=WJH09743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460833.1;locus_tag=PUW31_05985;product=DNA polymerase III subunit theta;protein_id=WJH09743.1;transl_table=11 CP118128.1 Genbank gene 1260831 1261205 . + . ID=gene-PUW31_05990;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=PUW31_05990 CP118128.1 Protein Homology CDS 1260831 1261205 . + 0 ID=cds-WJH09744.1;Parent=gene-PUW31_05990;Dbxref=NCBI_GP:WJH09744.1;Name=WJH09744.1;Ontology_term=GO:0006825,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460832.1;locus_tag=PUW31_05990;product=CopC domain-containing protein YobA;protein_id=WJH09744.1;transl_table=11 CP118128.1 Genbank gene 1261206 1262081 . + . ID=gene-PUW31_05995;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=PUW31_05995 CP118128.1 Protein Homology CDS 1261206 1262081 . + 0 ID=cds-WJH09745.1;Parent=gene-PUW31_05995;Dbxref=NCBI_GP:WJH09745.1;Name=WJH09745.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460831.1;locus_tag=PUW31_05995;product=copper homeostasis membrane protein CopD;protein_id=WJH09745.1;transl_table=11 CP118128.1 Genbank gene 1262098 1262451 . + . ID=gene-PUW31_06000;Name=PUW31_06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06000 CP118128.1 Protein Homology CDS 1262098 1262451 . + 0 ID=cds-WJH09746.1;Parent=gene-PUW31_06000;Dbxref=NCBI_GP:WJH09746.1;Name=WJH09746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460830.1;locus_tag=PUW31_06000;product=YebY family protein;protein_id=WJH09746.1;transl_table=11 CP118128.1 Genbank gene 1262834 1263913 . - . ID=gene-PUW31_06005;Name=PUW31_06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06005 CP118128.1 Protein Homology CDS 1262834 1263913 . - 0 ID=cds-WJH09747.1;Parent=gene-PUW31_06005;Dbxref=NCBI_GP:WJH09747.1;Name=WJH09747.1;Ontology_term=GO:0015074,GO:0003677,GO:0008907;gbkey=CDS;go_function=DNA binding|0003677||IEA,integrase activity|0008907||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466154.1;locus_tag=PUW31_06005;product=phage integrase Arm DNA-binding domain-containing protein;protein_id=WJH09747.1;transl_table=11 CP118128.1 Genbank gene 1263888 1264166 . - . ID=gene-PUW31_06010;Name=PUW31_06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06010 CP118128.1 Protein Homology CDS 1263888 1264166 . - 0 ID=cds-WJH09748.1;Parent=gene-PUW31_06010;Dbxref=NCBI_GP:WJH09748.1;Name=WJH09748.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575998.1;locus_tag=PUW31_06010;product=excisionase;protein_id=WJH09748.1;transl_table=11 CP118128.1 Genbank gene 1264227 1264655 . - . ID=gene-PUW31_06015;Name=PUW31_06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06015 CP118128.1 Protein Homology CDS 1264227 1264655 . - 0 ID=cds-WJH09749.1;Parent=gene-PUW31_06015;Dbxref=NCBI_GP:WJH09749.1;Name=WJH09749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000743304.1;locus_tag=PUW31_06015;product=hypothetical protein;protein_id=WJH09749.1;transl_table=11 CP118128.1 Genbank gene 1264754 1264939 . - . ID=gene-PUW31_06020;Name=PUW31_06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06020 CP118128.1 Protein Homology CDS 1264754 1264939 . - 0 ID=cds-WJH09750.1;Parent=gene-PUW31_06020;Dbxref=NCBI_GP:WJH09750.1;Name=WJH09750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000280163.1;locus_tag=PUW31_06020;product=DUF1187 family protein;protein_id=WJH09750.1;transl_table=11 CP118128.1 Genbank gene 1264986 1265816 . - . ID=gene-PUW31_06025;Name=recT;gbkey=Gene;gene=recT;gene_biotype=protein_coding;locus_tag=PUW31_06025 CP118128.1 Protein Homology CDS 1264986 1265816 . - 0 ID=cds-WJH10677.1;Parent=gene-PUW31_06025;Dbxref=NCBI_GP:WJH10677.1;Name=WJH10677.1;Ontology_term=GO:0006259,GO:0003677;gbkey=CDS;gene=recT;go_function=DNA binding|0003677||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001126028.1;locus_tag=PUW31_06025;product=recombination protein RecT;protein_id=WJH10677.1;transl_table=11 CP118128.1 Genbank pseudogene 1265809 1268498 . - . ID=gene-PUW31_06030;Name=recE;gbkey=Gene;gene=recE;gene_biotype=pseudogene;locus_tag=PUW31_06030;pseudo=true CP118128.1 Protein Homology CDS 1265809 1268498 . - 0 ID=cds-PUW31_06030;Parent=gene-PUW31_06030;Note=frameshifted;Ontology_term=GO:0090305,GO:0051908;gbkey=CDS;gene=recE;go_function=double-stranded DNA 5'-3' exodeoxyribonuclease activity|0051908||IEA;go_process=nucleic acid phosphodiester bond hydrolysis|0090305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023732.1;locus_tag=PUW31_06030;product=exodeoxyribonuclease VIII;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1268639 1268974 . - . ID=gene-PUW31_06035;Name=PUW31_06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06035 CP118128.1 Protein Homology CDS 1268639 1268974 . - 0 ID=cds-WJH09751.1;Parent=gene-PUW31_06035;Dbxref=NCBI_GP:WJH09751.1;Name=WJH09751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000799630.1;locus_tag=PUW31_06035;product=hypothetical protein;protein_id=WJH09751.1;transl_table=11 CP118128.1 Genbank gene 1269050 1269256 . - . ID=gene-PUW31_06040;Name=PUW31_06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06040 CP118128.1 Protein Homology CDS 1269050 1269256 . - 0 ID=cds-WJH09752.1;Parent=gene-PUW31_06040;Dbxref=NCBI_GP:WJH09752.1;Name=WJH09752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000682660.1;locus_tag=PUW31_06040;product=cell division inhibitor protein;protein_id=WJH09752.1;transl_table=11 CP118128.1 Genbank gene 1269260 1269535 . - . ID=gene-PUW31_06045;Name=PUW31_06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06045 CP118128.1 Protein Homology CDS 1269260 1269535 . - 0 ID=cds-WJH09753.1;Parent=gene-PUW31_06045;Dbxref=NCBI_GP:WJH09753.1;Name=WJH09753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000103933.1;locus_tag=PUW31_06045;product=hypothetical protein;protein_id=WJH09753.1;transl_table=11 CP118128.1 Genbank gene 1269870 1270100 . + . ID=gene-PUW31_06050;Name=PUW31_06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06050 CP118128.1 GeneMarkS-2+ CDS 1269870 1270100 . + 0 ID=cds-WJH09754.1;Parent=gene-PUW31_06050;Dbxref=NCBI_GP:WJH09754.1;Name=WJH09754.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_06050;product=hypothetical protein;protein_id=WJH09754.1;transl_table=11 CP118128.1 Genbank gene 1270542 1270940 . - . ID=gene-PUW31_06055;Name=PUW31_06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06055 CP118128.1 Protein Homology CDS 1270542 1270940 . - 0 ID=cds-WJH09755.1;Parent=gene-PUW31_06055;Dbxref=NCBI_GP:WJH09755.1;Name=WJH09755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574209.1;locus_tag=PUW31_06055;product=helix-turn-helix domain-containing protein;protein_id=WJH09755.1;transl_table=11 CP118128.1 Genbank gene 1271039 1271293 . + . ID=gene-PUW31_06060;Name=PUW31_06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06060 CP118128.1 Protein Homology CDS 1271039 1271293 . + 0 ID=cds-WJH09756.1;Parent=gene-PUW31_06060;Dbxref=NCBI_GP:WJH09756.1;Name=WJH09756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462799.1;locus_tag=PUW31_06060;product=helix-turn-helix transcriptional regulator;protein_id=WJH09756.1;transl_table=11 CP118128.1 Genbank gene 1271280 1271774 . + . ID=gene-PUW31_06065;Name=PUW31_06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06065 CP118128.1 Protein Homology CDS 1271280 1271774 . + 0 ID=cds-WJH09757.1;Parent=gene-PUW31_06065;Dbxref=NCBI_GP:WJH09757.1;Name=WJH09757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533160.1;locus_tag=PUW31_06065;product=toxin YdaT family protein;protein_id=WJH09757.1;transl_table=11 CP118128.1 Genbank gene 1271821 1272819 . + . ID=gene-PUW31_06070;Name=PUW31_06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06070 CP118128.1 Protein Homology CDS 1271821 1272819 . + 0 ID=cds-WJH09758.1;Parent=gene-PUW31_06070;Dbxref=NCBI_GP:WJH09758.1;Name=WJH09758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729543.1;locus_tag=PUW31_06070;product=DUF1376 domain-containing protein;protein_id=WJH09758.1;transl_table=11 CP118128.1 Genbank gene 1272731 1273273 . + . ID=gene-PUW31_06075;Name=PUW31_06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06075 CP118128.1 Protein Homology CDS 1272731 1273273 . + 0 ID=cds-WJH09759.1;Parent=gene-PUW31_06075;Dbxref=NCBI_GP:WJH09759.1;Name=WJH09759.1;Ontology_term=GO:0006270;gbkey=CDS;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001307798.1;locus_tag=PUW31_06075;product=replication protein P;protein_id=WJH09759.1;transl_table=11 CP118128.1 Genbank gene 1273286 1273681 . + . ID=gene-PUW31_06080;Name=PUW31_06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06080 CP118128.1 Protein Homology CDS 1273286 1273681 . + 0 ID=cds-WJH09760.1;Parent=gene-PUW31_06080;Dbxref=NCBI_GP:WJH09760.1;Name=WJH09760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089414.1;locus_tag=PUW31_06080;product=DUF977 family protein;protein_id=WJH09760.1;transl_table=11 CP118128.1 Genbank gene 1273968 1275098 . - . ID=gene-PUW31_06085;Name=PUW31_06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06085 CP118128.1 Protein Homology CDS 1273968 1275098 . - 0 ID=cds-WJH09761.1;Parent=gene-PUW31_06085;Dbxref=NCBI_GP:WJH09761.1;Name=WJH09761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000529511.1;locus_tag=PUW31_06085;product=GGDEF domain-containing protein;protein_id=WJH09761.1;transl_table=11 CP118128.1 Genbank gene 1275495 1277474 . + . ID=gene-PUW31_06090;Name=PUW31_06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06090 CP118128.1 Protein Homology CDS 1275495 1277474 . + 0 ID=cds-WJH09762.1;Parent=gene-PUW31_06090;Dbxref=NCBI_GP:WJH09762.1;Name=WJH09762.1;Ontology_term=GO:0046983;gbkey=CDS;go_function=protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078314.1;locus_tag=PUW31_06090;product=alkyl sulfatase dimerization domain-containing protein;protein_id=WJH09762.1;transl_table=11 CP118128.1 Genbank gene 1277793 1277891 . + . ID=gene-PUW31_06095;Name=PUW31_06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06095 CP118128.1 Protein Homology CDS 1277793 1277891 . + 0 ID=cds-WJH10678.1;Parent=gene-PUW31_06095;Dbxref=NCBI_GP:WJH10678.1;Name=WJH10678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416080.1;locus_tag=PUW31_06095;product=hypothetical protein;protein_id=WJH10678.1;transl_table=11 CP118128.1 Genbank gene 1278193 1278411 . + . ID=gene-PUW31_06100;Name=PUW31_06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06100 CP118128.1 Protein Homology CDS 1278193 1278411 . + 0 ID=cds-WJH09763.1;Parent=gene-PUW31_06100;Dbxref=NCBI_GP:WJH09763.1;Name=WJH09763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524708.1;locus_tag=PUW31_06100;product=hypothetical protein;protein_id=WJH09763.1;transl_table=11 CP118128.1 Genbank gene 1278475 1279074 . + . ID=gene-PUW31_06105;Name=PUW31_06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06105 CP118128.1 Protein Homology CDS 1278475 1279074 . + 0 ID=cds-WJH09764.1;Parent=gene-PUW31_06105;Dbxref=NCBI_GP:WJH09764.1;Name=WJH09764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707250.1;locus_tag=PUW31_06105;product=DUF1367 family protein;protein_id=WJH09764.1;transl_table=11 CP118128.1 Genbank gene 1279077 1279298 . + . ID=gene-PUW31_06110;Name=PUW31_06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06110 CP118128.1 Protein Homology CDS 1279077 1279298 . + 0 ID=cds-WJH10679.1;Parent=gene-PUW31_06110;Dbxref=NCBI_GP:WJH10679.1;Name=WJH10679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096570.1;locus_tag=PUW31_06110;product=recombination protein NinG;protein_id=WJH10679.1;transl_table=11 CP118128.1 Genbank pseudogene 1279295 1279431 . + . ID=gene-PUW31_06115;Name=PUW31_06115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_06115;pseudo=true CP118128.1 Protein Homology CDS 1279295 1279431 . + 0 ID=cds-PUW31_06115;Parent=gene-PUW31_06115;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000971070.1;locus_tag=PUW31_06115;product=YlcG family protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1279428 1280117 . + . ID=gene-PUW31_06120;Name=PUW31_06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06120 CP118128.1 Protein Homology CDS 1279428 1280117 . + 0 ID=cds-WJH09765.1;Parent=gene-PUW31_06120;Dbxref=NCBI_GP:WJH09765.1;Name=WJH09765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151283.1;locus_tag=PUW31_06120;product=bacteriophage antitermination protein Q;protein_id=WJH09765.1;transl_table=11 CP118128.1 Genbank gene 1280211 1280738 . + . ID=gene-PUW31_06125;Name=PUW31_06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06125 CP118128.1 Protein Homology CDS 1280211 1280738 . + 0 ID=cds-WJH09766.1;Parent=gene-PUW31_06125;Dbxref=NCBI_GP:WJH09766.1;Name=WJH09766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000971762.1;locus_tag=PUW31_06125;product=hypothetical protein;protein_id=WJH09766.1;transl_table=11 CP118128.1 Genbank gene 1281112 1281561 . - . ID=gene-PUW31_06130;Name=PUW31_06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06130 CP118128.1 Protein Homology CDS 1281112 1281561 . - 0 ID=cds-WJH09767.1;Parent=gene-PUW31_06130;Dbxref=NCBI_GP:WJH09767.1;Name=WJH09767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460000.1;locus_tag=PUW31_06130;product=hypothetical protein;protein_id=WJH09767.1;transl_table=11 CP118128.1 Genbank gene 1281922 1282608 . - . ID=gene-PUW31_06135;Name=gtgA;gbkey=Gene;gene=gtgA;gene_biotype=protein_coding;locus_tag=PUW31_06135 CP118128.1 Protein Homology CDS 1281922 1282608 . - 0 ID=cds-WJH09768.1;Parent=gene-PUW31_06135;Dbxref=NCBI_GP:WJH09768.1;Name=WJH09768.1;gbkey=CDS;gene=gtgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461550.1;locus_tag=PUW31_06135;product=type III secretion system effector protease GtgA;protein_id=WJH09768.1;transl_table=11 CP118128.1 Genbank gene 1282884 1283213 . + . ID=gene-PUW31_06140;Name=PUW31_06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06140 CP118128.1 Protein Homology CDS 1282884 1283213 . + 0 ID=cds-WJH10680.1;Parent=gene-PUW31_06140;Dbxref=NCBI_GP:WJH10680.1;Name=WJH10680.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461549.1;locus_tag=PUW31_06140;product=phage holin%2C lambda family;protein_id=WJH10680.1;transl_table=11 CP118128.1 Genbank gene 1283197 1283649 . + . ID=gene-PUW31_06145;Name=PUW31_06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06145 CP118128.1 Protein Homology CDS 1283197 1283649 . + 0 ID=cds-WJH09769.1;Parent=gene-PUW31_06145;Dbxref=NCBI_GP:WJH09769.1;Name=WJH09769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460003.1;locus_tag=PUW31_06145;product=lysozyme;protein_id=WJH09769.1;transl_table=11 CP118128.1 Genbank gene 1283667 1284146 . + . ID=gene-PUW31_06150;Name=PUW31_06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06150 CP118128.1 Protein Homology CDS 1283667 1284146 . + 0 ID=cds-WJH09770.1;Parent=gene-PUW31_06150;Dbxref=NCBI_GP:WJH09770.1;Name=WJH09770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460004.1;locus_tag=PUW31_06150;product=lysis protein;protein_id=WJH09770.1;transl_table=11 CP118128.1 Genbank gene 1284354 1284887 . + . ID=gene-PUW31_06155;Name=PUW31_06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06155 CP118128.1 Protein Homology CDS 1284354 1284887 . + 0 ID=cds-WJH09771.1;Parent=gene-PUW31_06155;Dbxref=NCBI_GP:WJH09771.1;Name=WJH09771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460005.1;locus_tag=PUW31_06155;product=DUF1441 family protein;protein_id=WJH09771.1;transl_table=11 CP118128.1 Genbank gene 1284844 1286982 . + . ID=gene-PUW31_06160;Name=PUW31_06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06160 CP118128.1 Protein Homology CDS 1284844 1286982 . + 0 ID=cds-WJH10681.1;Parent=gene-PUW31_06160;Dbxref=NCBI_GP:WJH10681.1;Name=WJH10681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460006.1;locus_tag=PUW31_06160;product=phage terminase large subunit family protein;protein_id=WJH10681.1;transl_table=11 CP118128.1 Genbank gene 1286979 1287185 . + . ID=gene-PUW31_06165;Name=PUW31_06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06165 CP118128.1 Protein Homology CDS 1286979 1287185 . + 0 ID=cds-WJH09772.1;Parent=gene-PUW31_06165;Dbxref=NCBI_GP:WJH09772.1;Name=WJH09772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000196190.1;locus_tag=PUW31_06165;product=primosomal replication protein PriB/PriC domain protein;protein_id=WJH09772.1;transl_table=11 CP118128.1 Genbank gene 1287182 1288729 . + . ID=gene-PUW31_06170;Name=PUW31_06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06170 CP118128.1 Protein Homology CDS 1287182 1288729 . + 0 ID=cds-WJH09773.1;Parent=gene-PUW31_06170;Dbxref=NCBI_GP:WJH09773.1;Name=WJH09773.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001009205.1;locus_tag=PUW31_06170;product=phage portal protein;protein_id=WJH09773.1;transl_table=11 CP118128.1 Genbank pseudogene 1288653 1290733 . + . ID=gene-PUW31_06175;Name=PUW31_06175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_06175;pseudo=true CP118128.1 Protein Homology CDS 1288653 1290733 . + 0 ID=cds-PUW31_06175;Parent=gene-PUW31_06175;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460008.1;locus_tag=PUW31_06175;product=Clp protease ClpP;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1290824 1291147 . + . ID=gene-PUW31_06180;Name=PUW31_06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06180 CP118128.1 Protein Homology CDS 1290824 1291147 . + 0 ID=cds-WJH09774.1;Parent=gene-PUW31_06180;Dbxref=NCBI_GP:WJH09774.1;Name=WJH09774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460009.1;locus_tag=PUW31_06180;product=DUF2190 family protein;protein_id=WJH09774.1;transl_table=11 CP118128.1 Genbank gene 1291140 1291439 . + . ID=gene-PUW31_06185;Name=PUW31_06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06185 CP118128.1 Protein Homology CDS 1291140 1291439 . + 0 ID=cds-WJH09775.1;Parent=gene-PUW31_06185;Dbxref=NCBI_GP:WJH09775.1;Name=WJH09775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460010.1;locus_tag=PUW31_06185;product=ATP-binding protein;protein_id=WJH09775.1;transl_table=11 CP118128.1 Genbank gene 1291420 1291986 . + . ID=gene-PUW31_06190;Name=PUW31_06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06190 CP118128.1 Protein Homology CDS 1291420 1291986 . + 0 ID=cds-WJH09776.1;Parent=gene-PUW31_06190;Dbxref=NCBI_GP:WJH09776.1;Name=WJH09776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460011.1;locus_tag=PUW31_06190;product=phage tail protein;protein_id=WJH09776.1;transl_table=11 CP118128.1 Genbank gene 1291983 1292384 . + . ID=gene-PUW31_06195;Name=PUW31_06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06195 CP118128.1 Protein Homology CDS 1291983 1292384 . + 0 ID=cds-WJH09777.1;Parent=gene-PUW31_06195;Dbxref=NCBI_GP:WJH09777.1;Name=WJH09777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460012.1;locus_tag=PUW31_06195;product=phage minor tail U family protein;protein_id=WJH09777.1;transl_table=11 CP118128.1 Genbank gene 1292396 1293145 . + . ID=gene-PUW31_06200;Name=PUW31_06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06200 CP118128.1 Protein Homology CDS 1292396 1293145 . + 0 ID=cds-WJH09778.1;Parent=gene-PUW31_06200;Dbxref=NCBI_GP:WJH09778.1;Name=WJH09778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460013.1;locus_tag=PUW31_06200;product=phage tail protein;protein_id=WJH09778.1;transl_table=11 CP118128.1 Genbank gene 1293191 1293589 . + . ID=gene-PUW31_06205;Name=PUW31_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06205 CP118128.1 Protein Homology CDS 1293191 1293589 . + 0 ID=cds-WJH09779.1;Parent=gene-PUW31_06205;Dbxref=NCBI_GP:WJH09779.1;Name=WJH09779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460014.1;locus_tag=PUW31_06205;product=phage minor tail protein G;protein_id=WJH09779.1;transl_table=11 CP118128.1 Genbank gene 1293586 1293915 . + . ID=gene-PUW31_06210;Name=PUW31_06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06210 CP118128.1 Protein Homology CDS 1293586 1293915 . + 0 ID=cds-WJH10682.1;Parent=gene-PUW31_06210;Dbxref=NCBI_GP:WJH10682.1;Name=WJH10682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460015.1;locus_tag=PUW31_06210;product=phage tail assembly protein T;protein_id=WJH10682.1;transl_table=11 CP118128.1 Genbank pseudogene 1293995 1296981 . + . ID=gene-PUW31_06215;Name=PUW31_06215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_06215;pseudo=true CP118128.1 Protein Homology CDS 1293995 1296981 . + 0 ID=cds-PUW31_06215;Parent=gene-PUW31_06215;Note=frameshifted;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460016.1;locus_tag=PUW31_06215;product=phage tail tape measure protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1296978 1297310 . + . ID=gene-PUW31_06220;Name=PUW31_06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06220 CP118128.1 Protein Homology CDS 1296978 1297310 . + 0 ID=cds-WJH09780.1;Parent=gene-PUW31_06220;Dbxref=NCBI_GP:WJH09780.1;Name=WJH09780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460017.1;locus_tag=PUW31_06220;product=phage tail protein;protein_id=WJH09780.1;transl_table=11 CP118128.1 Genbank gene 1297409 1297906 . + . ID=gene-PUW31_06225;Name=PUW31_06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06225 CP118128.1 Protein Homology CDS 1297409 1297906 . + 0 ID=cds-WJH09781.1;Parent=gene-PUW31_06225;Dbxref=NCBI_GP:WJH09781.1;Name=WJH09781.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410972.1;locus_tag=PUW31_06225;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WJH09781.1;transl_table=11 CP118128.1 Genbank gene 1298023 1298556 . - . ID=gene-PUW31_06230;Name=sodC1;gbkey=Gene;gene=sodC1;gene_biotype=protein_coding;gene_synonym=sodCI;locus_tag=PUW31_06230 CP118128.1 Protein Homology CDS 1298023 1298556 . - 0 ID=cds-WJH09782.1;Parent=gene-PUW31_06230;Dbxref=NCBI_GP:WJH09782.1;Name=WJH09782.1;gbkey=CDS;gene=sodC1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460019.1;locus_tag=PUW31_06230;product=superoxide dismutase [Cu-Zn] SodC1;protein_id=WJH09782.1;transl_table=11 CP118128.1 Genbank gene 1298646 1299341 . + . ID=gene-PUW31_06235;Name=PUW31_06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06235 CP118128.1 Protein Homology CDS 1298646 1299341 . + 0 ID=cds-WJH09783.1;Parent=gene-PUW31_06235;Dbxref=NCBI_GP:WJH09783.1;Name=WJH09783.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460020.1;locus_tag=PUW31_06235;product=phage minor tail protein L;protein_id=WJH09783.1;transl_table=11 CP118128.1 Genbank gene 1299351 1300082 . + . ID=gene-PUW31_06240;Name=PUW31_06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06240 CP118128.1 Protein Homology CDS 1299351 1300082 . + 0 ID=cds-WJH09784.1;Parent=gene-PUW31_06240;Dbxref=NCBI_GP:WJH09784.1;Name=WJH09784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000606352.1;locus_tag=PUW31_06240;product=C40 family peptidase;protein_id=WJH09784.1;transl_table=11 CP118128.1 Genbank gene 1299986 1300690 . + . ID=gene-PUW31_06245;Name=PUW31_06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06245 CP118128.1 Protein Homology CDS 1299986 1300690 . + 0 ID=cds-WJH09785.1;Parent=gene-PUW31_06245;Dbxref=NCBI_GP:WJH09785.1;Name=WJH09785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460022.1;locus_tag=PUW31_06245;product=tail assembly protein;protein_id=WJH09785.1;transl_table=11 CP118128.1 Genbank pseudogene 1300762 1303213 . + . ID=gene-PUW31_06250;Name=PUW31_06250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_06250;pseudo=true CP118128.1 Protein Homology CDS 1300762 1303213 . + 0 ID=cds-PUW31_06250;Parent=gene-PUW31_06250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460023.1;locus_tag=PUW31_06250;product=host specificity protein J;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 1303283 1303465 . + . ID=gene-PUW31_06255;Name=PUW31_06255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_06255;pseudo=true CP118128.1 Protein Homology CDS 1303283 1303465 . + 0 ID=cds-PUW31_06255;Parent=gene-PUW31_06255;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020885.2;locus_tag=PUW31_06255;product=DUF1983 domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1303523 1304116 . + . ID=gene-PUW31_06260;Name=PUW31_06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06260 CP118128.1 Protein Homology CDS 1303523 1304116 . + 0 ID=cds-WJH10683.1;Parent=gene-PUW31_06260;Dbxref=NCBI_GP:WJH10683.1;Name=WJH10683.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023837.2;locus_tag=PUW31_06260;product=hypothetical protein;protein_id=WJH10683.1;transl_table=11 CP118128.1 Genbank gene 1304161 1304397 . + . ID=gene-PUW31_06265;Name=PUW31_06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06265 CP118128.1 Protein Homology CDS 1304161 1304397 . + 0 ID=cds-WJH09786.1;Parent=gene-PUW31_06265;Dbxref=NCBI_GP:WJH09786.1;Name=WJH09786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533254.1;locus_tag=PUW31_06265;product=hypothetical protein;protein_id=WJH09786.1;transl_table=11 CP118128.1 Genbank pseudogene 1304451 1306418 . + . ID=gene-PUW31_06270;Name=PUW31_06270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_06270;pseudo=true CP118128.1 Protein Homology CDS 1304451 1306418 . + 0 ID=cds-PUW31_06270;Parent=gene-PUW31_06270;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460024.1;locus_tag=PUW31_06270;product=prophage tail fiber N-terminal domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1306418 1306987 . + . ID=gene-PUW31_06275;Name=PUW31_06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06275 CP118128.1 Protein Homology CDS 1306418 1306987 . + 0 ID=cds-WJH09787.1;Parent=gene-PUW31_06275;Dbxref=NCBI_GP:WJH09787.1;Name=WJH09787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000143180.1;locus_tag=PUW31_06275;product=tail fiber assembly protein;protein_id=WJH09787.1;transl_table=11 CP118128.1 Genbank gene 1307189 1307911 . - . ID=gene-PUW31_06280;Name=sopE;gbkey=Gene;gene=sopE;gene_biotype=protein_coding;locus_tag=PUW31_06280 CP118128.1 Protein Homology CDS 1307189 1307911 . - 0 ID=cds-WJH09788.1;Parent=gene-PUW31_06280;Dbxref=NCBI_GP:WJH09788.1;Name=WJH09788.1;gbkey=CDS;gene=sopE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000161707.1;locus_tag=PUW31_06280;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE;protein_id=WJH09788.1;transl_table=11 CP118128.1 Genbank pseudogene 1308121 1308362 . + . ID=gene-PUW31_06285;Name=PUW31_06285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_06285;pseudo=true CP118128.1 Protein Homology CDS 1308121 1308362 . + 0 ID=cds-PUW31_06285;Parent=gene-PUW31_06285;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239587.1;locus_tag=PUW31_06285;product=recombinase family protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1308391 1309191 . - . ID=gene-PUW31_06290;Name=PUW31_06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06290 CP118128.1 Protein Homology CDS 1308391 1309191 . - 0 ID=cds-WJH09789.1;Parent=gene-PUW31_06290;Dbxref=NCBI_GP:WJH09789.1;Name=WJH09789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000586172.1;locus_tag=PUW31_06290;product=hypothetical protein;protein_id=WJH09789.1;transl_table=11 CP118128.1 Genbank pseudogene 1310136 1311058 . - . ID=gene-PUW31_06295;Name=PUW31_06295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_06295;pseudo=true CP118128.1 Protein Homology CDS 1310136 1311058 . - 0 ID=cds-PUW31_06295;Parent=gene-PUW31_06295;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466154.1;locus_tag=PUW31_06295;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 1311322 1311783 . - . ID=gene-PUW31_06300;Name=PUW31_06300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_06300;pseudo=true CP118128.1 Protein Homology CDS 1311322 1311783 . - 0 ID=cds-PUW31_06300;Parent=gene-PUW31_06300;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023715.1;locus_tag=PUW31_06300;product=DNA breaking-rejoining protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 1311772 1311963 . + . ID=gene-PUW31_06305;Name=PUW31_06305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_06305;pseudo=true CP118128.1 Protein Homology CDS 1311772 1311963 . + 0 ID=cds-PUW31_06305;Parent=gene-PUW31_06305;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459884.1;locus_tag=PUW31_06305;product=glycoside hydrolase family 19 protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 1312017 1312549 . + . ID=gene-PUW31_06310;Name=PUW31_06310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_06310;pseudo=true CP118128.1 Protein Homology CDS 1312017 1312549 . + 0 ID=cds-PUW31_06310;Parent=gene-PUW31_06310;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460825.1;locus_tag=PUW31_06310;product=DUF2514 domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1312806 1312973 . - . ID=gene-PUW31_06315;Name=PUW31_06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06315 CP118128.1 Protein Homology CDS 1312806 1312973 . - 0 ID=cds-WJH09790.1;Parent=gene-PUW31_06315;Dbxref=NCBI_GP:WJH09790.1;Name=WJH09790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460824.1;locus_tag=PUW31_06315;product=lytic enzyme;protein_id=WJH09790.1;transl_table=11 CP118128.1 Genbank gene 1313037 1313225 . - . ID=gene-PUW31_06320;Name=PUW31_06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06320 CP118128.1 Protein Homology CDS 1313037 1313225 . - 0 ID=cds-WJH09791.1;Parent=gene-PUW31_06320;Dbxref=NCBI_GP:WJH09791.1;Name=WJH09791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537366.1;locus_tag=PUW31_06320;product=hypothetical protein;protein_id=WJH09791.1;transl_table=11 CP118128.1 Genbank gene 1313280 1313771 . + . ID=gene-PUW31_06325;Name=PUW31_06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06325 CP118128.1 Protein Homology CDS 1313280 1313771 . + 0 ID=cds-WJH09792.1;Parent=gene-PUW31_06325;Dbxref=NCBI_GP:WJH09792.1;Name=WJH09792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459886.1;locus_tag=PUW31_06325;product=DUF1441 family protein;protein_id=WJH09792.1;transl_table=11 CP118128.1 Genbank pseudogene 1313758 1314325 . + . ID=gene-PUW31_06330;Name=PUW31_06330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_06330;pseudo=true CP118128.1 Protein Homology CDS 1313758 1314325 . + 0 ID=cds-PUW31_06330;Parent=gene-PUW31_06330;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459887.1;locus_tag=PUW31_06330;product=phage terminase large subunit family protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 1314324 1315554 . + . ID=gene-PUW31_06335;Name=PUW31_06335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_06335;pseudo=true CP118128.1 Protein Homology CDS 1314324 1315554 . + 0 ID=cds-PUW31_06335;Parent=gene-PUW31_06335;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461524.1;locus_tag=PUW31_06335;product=tail fiber protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 1315564 1315851 . + . ID=gene-PUW31_06340;Name=PUW31_06340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_06340;pseudo=true CP118128.1 Protein Homology CDS 1315564 1315851 . + 0 ID=cds-PUW31_06340;Parent=gene-PUW31_06340;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013798.2;locus_tag=PUW31_06340;product=macro domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 1315864 1316375 . + . ID=gene-PUW31_06345;Name=PUW31_06345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_06345;pseudo=true CP118128.1 Protein Homology CDS 1315864 1316375 . + 0 ID=cds-PUW31_06345;Parent=gene-PUW31_06345;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461522.1;locus_tag=PUW31_06345;product=tail fiber assembly protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1316472 1316672 . - . ID=gene-PUW31_06350;Name=PUW31_06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06350 CP118128.1 Protein Homology CDS 1316472 1316672 . - 0 ID=cds-WJH09793.1;Parent=gene-PUW31_06350;Dbxref=NCBI_GP:WJH09793.1;Name=WJH09793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460822.1;locus_tag=PUW31_06350;product=PagK family vesicle-borne virulence factor;protein_id=WJH09793.1;transl_table=11 CP118128.1 Genbank pseudogene 1317062 1317242 . - . ID=gene-PUW31_06355;Name=PUW31_06355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_06355;pseudo=true CP118128.1 Protein Homology CDS 1317062 1317242 . - 0 ID=cds-PUW31_06355;Parent=gene-PUW31_06355;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=PUW31_06355;product=IS3 family transposase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1317242 1317367 . + . ID=gene-PUW31_06360;Name=PUW31_06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06360 CP118128.1 Protein Homology CDS 1317242 1317367 . + 0 ID=cds-WJH09794.1;Parent=gene-PUW31_06360;Dbxref=NCBI_GP:WJH09794.1;Name=WJH09794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457876.1;locus_tag=PUW31_06360;product=arsenic transporter;protein_id=WJH09794.1;transl_table=11 CP118128.1 Genbank gene 1317881 1318027 . - . ID=gene-PUW31_06365;Name=PUW31_06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06365 CP118128.1 Protein Homology CDS 1317881 1318027 . - 0 ID=cds-WJH09795.1;Parent=gene-PUW31_06365;Dbxref=NCBI_GP:WJH09795.1;Name=WJH09795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537204.1;locus_tag=PUW31_06365;product=hypothetical protein;protein_id=WJH09795.1;transl_table=11 CP118128.1 Genbank gene 1318021 1318188 . + . ID=gene-PUW31_06370;Name=PUW31_06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06370 CP118128.1 Protein Homology CDS 1318021 1318188 . + 0 ID=cds-WJH09796.1;Parent=gene-PUW31_06370;Dbxref=NCBI_GP:WJH09796.1;Name=WJH09796.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014814.2;locus_tag=PUW31_06370;product=helix-turn-helix domain-containing protein;protein_id=WJH09796.1;transl_table=11 CP118128.1 Genbank gene 1318515 1319129 . - . ID=gene-PUW31_06375;Name=PUW31_06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06375 CP118128.1 Protein Homology CDS 1318515 1319129 . - 0 ID=cds-WJH09797.1;Parent=gene-PUW31_06375;Dbxref=NCBI_GP:WJH09797.1;Name=WJH09797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460820.1;locus_tag=PUW31_06375;product=disulfide bond formation protein B;protein_id=WJH09797.1;transl_table=11 CP118128.1 Genbank gene 1319139 1319297 . - . ID=gene-PUW31_06380;Name=PUW31_06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06380 CP118128.1 Protein Homology CDS 1319139 1319297 . - 0 ID=cds-WJH09798.1;Parent=gene-PUW31_06380;Dbxref=NCBI_GP:WJH09798.1;Name=WJH09798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460819.1;locus_tag=PUW31_06380;product=DUF5993 family protein;protein_id=WJH09798.1;transl_table=11 CP118128.1 Genbank gene 1319430 1320344 . - . ID=gene-PUW31_06385;Name=PUW31_06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06385 CP118128.1 Protein Homology CDS 1319430 1320344 . - 0 ID=cds-WJH09799.1;Parent=gene-PUW31_06385;Dbxref=NCBI_GP:WJH09799.1;Name=WJH09799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460818.1;locus_tag=PUW31_06385;product=DMT family transporter;protein_id=WJH09799.1;transl_table=11 CP118128.1 Genbank pseudogene 1321595 1322061 . - . ID=gene-PUW31_06390;Name=PUW31_06390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_06390;pseudo=true CP118128.1 Protein Homology CDS 1321595 1322061 . - 0 ID=cds-PUW31_06390;Parent=gene-PUW31_06390;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001189081.1;locus_tag=PUW31_06390;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 1322131 1323338 . + . ID=gene-PUW31_06395;Name=PUW31_06395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_06395;pseudo=true CP118128.1 Protein Homology CDS 1322131 1323338 . + 0 ID=cds-PUW31_06395;Parent=gene-PUW31_06395;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=PUW31_06395;product=IS256 family transposase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1323484 1323624 . - . ID=gene-PUW31_06400;Name=PUW31_06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06400 CP118128.1 Protein Homology CDS 1323484 1323624 . - 0 ID=cds-WJH09800.1;Parent=gene-PUW31_06400;Dbxref=NCBI_GP:WJH09800.1;Name=WJH09800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576018.1;locus_tag=PUW31_06400;product=hypothetical protein;protein_id=WJH09800.1;transl_table=11 CP118128.1 Genbank gene 1323790 1324059 . - . ID=gene-PUW31_06405;Name=PUW31_06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06405 CP118128.1 Protein Homology CDS 1323790 1324059 . - 0 ID=cds-WJH09801.1;Parent=gene-PUW31_06405;Dbxref=NCBI_GP:WJH09801.1;Name=WJH09801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460814.1;locus_tag=PUW31_06405;product=hypothetical protein;protein_id=WJH09801.1;transl_table=11 CP118128.1 Genbank gene 1324432 1324851 . + . ID=gene-PUW31_06410;Name=PUW31_06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06410 CP118128.1 Protein Homology CDS 1324432 1324851 . + 0 ID=cds-WJH09802.1;Parent=gene-PUW31_06410;Dbxref=NCBI_GP:WJH09802.1;Name=WJH09802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460813.1;locus_tag=PUW31_06410;product=GNAT family N-acetyltransferase;protein_id=WJH09802.1;transl_table=11 CP118128.1 Genbank gene 1325224 1325700 . - . ID=gene-PUW31_06415;Name=PUW31_06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06415 CP118128.1 Protein Homology CDS 1325224 1325700 . - 0 ID=cds-WJH09803.1;Parent=gene-PUW31_06415;Dbxref=NCBI_GP:WJH09803.1;Name=WJH09803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000030934.1;locus_tag=PUW31_06415;product=hypothetical protein;protein_id=WJH09803.1;transl_table=11 CP118128.1 Genbank gene 1326030 1326425 . - . ID=gene-PUW31_06420;Name=PUW31_06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06420 CP118128.1 Protein Homology CDS 1326030 1326425 . - 0 ID=cds-WJH09804.1;Parent=gene-PUW31_06420;Dbxref=NCBI_GP:WJH09804.1;Name=WJH09804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460812.1;locus_tag=PUW31_06420;product=DUF1398 domain-containing protein;protein_id=WJH09804.1;transl_table=11 CP118128.1 Genbank gene 1327109 1327831 . + . ID=gene-PUW31_06425;Name=sopE2;gbkey=Gene;gene=sopE2;gene_biotype=protein_coding;locus_tag=PUW31_06425 CP118128.1 Protein Homology CDS 1327109 1327831 . + 0 ID=cds-WJH09805.1;Parent=gene-PUW31_06425;Dbxref=NCBI_GP:WJH09805.1;Name=WJH09805.1;gbkey=CDS;gene=sopE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460811.1;locus_tag=PUW31_06425;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE2;protein_id=WJH09805.1;transl_table=11 CP118128.1 Genbank gene 1328116 1328280 . + . ID=gene-PUW31_06430;Name=PUW31_06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06430 CP118128.1 Protein Homology CDS 1328116 1328280 . + 0 ID=cds-WJH09806.1;Parent=gene-PUW31_06430;Dbxref=NCBI_GP:WJH09806.1;Name=WJH09806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460810.1;locus_tag=PUW31_06430;product=hypothetical protein;protein_id=WJH09806.1;transl_table=11 CP118128.1 Genbank gene 1328504 1329154 . + . ID=gene-PUW31_06435;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=PUW31_06435 CP118128.1 Protein Homology CDS 1328504 1329154 . + 0 ID=cds-WJH09807.1;Parent=gene-PUW31_06435;Dbxref=NCBI_GP:WJH09807.1;Name=WJH09807.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460809.1;locus_tag=PUW31_06435;product=protein-serine/threonine phosphatase;protein_id=WJH09807.1;transl_table=11 CP118128.1 Genbank gene 1329173 1329364 . - . ID=gene-PUW31_06440;Name=PUW31_06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06440 CP118128.1 Protein Homology CDS 1329173 1329364 . - 0 ID=cds-WJH09808.1;Parent=gene-PUW31_06440;Dbxref=NCBI_GP:WJH09808.1;Name=WJH09808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460808.1;locus_tag=PUW31_06440;product=YebW family protein;protein_id=WJH09808.1;transl_table=11 CP118128.1 Genbank gene 1329475 1329711 . - . ID=gene-PUW31_06445;Name=PUW31_06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06445 CP118128.1 Protein Homology CDS 1329475 1329711 . - 0 ID=cds-WJH10684.1;Parent=gene-PUW31_06445;Dbxref=NCBI_GP:WJH10684.1;Name=WJH10684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=PUW31_06445;product=YebV family protein;protein_id=WJH10684.1;transl_table=11 CP118128.1 Genbank gene 1329829 1331268 . - . ID=gene-PUW31_06450;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=PUW31_06450 CP118128.1 Protein Homology CDS 1329829 1331268 . - 0 ID=cds-WJH09809.1;Parent=gene-PUW31_06450;Dbxref=NCBI_GP:WJH09809.1;Name=WJH09809.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460806.1;locus_tag=PUW31_06450;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WJH09809.1;transl_table=11 CP118128.1 Genbank gene 1331346 1333979 . - . ID=gene-PUW31_06455;Name=PUW31_06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06455 CP118128.1 Protein Homology CDS 1331346 1333979 . - 0 ID=cds-WJH09810.1;Parent=gene-PUW31_06455;Dbxref=NCBI_GP:WJH09810.1;Name=WJH09810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=PUW31_06455;product=MlaD family protein;protein_id=WJH09810.1;transl_table=11 CP118128.1 Genbank gene 1333948 1335231 . - . ID=gene-PUW31_06460;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=PUW31_06460 CP118128.1 Protein Homology CDS 1333948 1335231 . - 0 ID=cds-WJH09811.1;Parent=gene-PUW31_06460;Dbxref=NCBI_GP:WJH09811.1;Name=WJH09811.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460804.1;locus_tag=PUW31_06460;product=membrane integrity lipid transport subunit YebS;protein_id=WJH09811.1;transl_table=11 CP118128.1 Genbank gene 1335360 1335857 . + . ID=gene-PUW31_06465;Name=PUW31_06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06465 CP118128.1 Protein Homology CDS 1335360 1335857 . + 0 ID=cds-WJH09812.1;Parent=gene-PUW31_06465;Dbxref=NCBI_GP:WJH09812.1;Name=WJH09812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707287.1;locus_tag=PUW31_06465;product=GAF domain-containing protein;protein_id=WJH09812.1;transl_table=11 CP118128.1 Genbank gene 1335955 1336641 . + . ID=gene-PUW31_06470;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=PUW31_06470 CP118128.1 Protein Homology CDS 1335955 1336641 . + 0 ID=cds-WJH09813.1;Parent=gene-PUW31_06470;Dbxref=NCBI_GP:WJH09813.1;Name=WJH09813.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460802.1;locus_tag=PUW31_06470;product=RNA chaperone ProQ;protein_id=WJH09813.1;transl_table=11 CP118128.1 Genbank gene 1336661 1338709 . + . ID=gene-PUW31_06475;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=PUW31_06475 CP118128.1 Protein Homology CDS 1336661 1338709 . + 0 ID=cds-WJH09814.1;Parent=gene-PUW31_06475;Dbxref=NCBI_GP:WJH09814.1;Name=WJH09814.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460801.1;locus_tag=PUW31_06475;product=carboxy terminal-processing peptidase;protein_id=WJH09814.1;transl_table=11 CP118128.1 Genbank gene 1338902 1339783 . + . ID=gene-PUW31_06480;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=PUW31_06480 CP118128.1 Protein Homology CDS 1338902 1339783 . + 0 ID=cds-WJH09815.1;Parent=gene-PUW31_06480;Dbxref=NCBI_GP:WJH09815.1;Name=WJH09815.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=PUW31_06480;product=protease HtpX;protein_id=WJH09815.1;transl_table=11 CP118128.1 Genbank pseudogene 1339831 1341082 . - . ID=gene-PUW31_06485;Name=PUW31_06485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_06485;pseudo=true CP118128.1 Protein Homology CDS 1339831 1341082 . - 0 ID=cds-PUW31_06485;Parent=gene-PUW31_06485;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460799.1;locus_tag=PUW31_06485;product=MFS transporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1341258 1342049 . + . ID=gene-PUW31_06490;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=PUW31_06490 CP118128.1 Protein Homology CDS 1341258 1342049 . + 0 ID=cds-WJH09816.1;Parent=gene-PUW31_06490;Dbxref=NCBI_GP:WJH09816.1;Name=WJH09816.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460798.1;locus_tag=PUW31_06490;product=DNA-binding transcriptional regulator KdgR;protein_id=WJH09816.1;transl_table=11 CP118128.1 Genbank gene 1342261 1342500 . - . ID=gene-PUW31_06495;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=PUW31_06495 CP118128.1 Protein Homology CDS 1342261 1342500 . - 0 ID=cds-WJH09817.1;Parent=gene-PUW31_06495;Dbxref=NCBI_GP:WJH09817.1;Name=WJH09817.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460797.1;locus_tag=PUW31_06495;product=invasion protein YobH;protein_id=WJH09817.1;transl_table=11 CP118128.1 Genbank gene 1342658 1342801 . + . ID=gene-PUW31_06500;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=PUW31_06500 CP118128.1 Protein Homology CDS 1342658 1342801 . + 0 ID=cds-WJH09818.1;Parent=gene-PUW31_06500;Dbxref=NCBI_GP:WJH09818.1;Name=WJH09818.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460796.1;locus_tag=PUW31_06500;product=PhoP/PhoQ regulator MgrB;protein_id=WJH09818.1;transl_table=11 CP118128.1 Genbank gene 1342872 1343159 . + . ID=gene-PUW31_06505;Name=PUW31_06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06505 CP118128.1 Protein Homology CDS 1342872 1343159 . + 0 ID=cds-WJH09819.1;Parent=gene-PUW31_06505;Dbxref=NCBI_GP:WJH09819.1;Name=WJH09819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460795.1;locus_tag=PUW31_06505;product=YebO family protein;protein_id=WJH09819.1;transl_table=11 CP118128.1 Genbank gene 1343807 1343950 . + . ID=gene-PUW31_06510;Name=PUW31_06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06510 CP118128.1 Protein Homology CDS 1343807 1343950 . + 0 ID=cds-WJH09820.1;Parent=gene-PUW31_06510;Dbxref=NCBI_GP:WJH09820.1;Name=WJH09820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460794.1;locus_tag=PUW31_06510;product=DUF2627 domain-containing protein;protein_id=WJH09820.1;transl_table=11 CP118128.1 Genbank gene 1343963 1344172 . + . ID=gene-PUW31_06515;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=PUW31_06515 CP118128.1 Protein Homology CDS 1343963 1344172 . + 0 ID=cds-WJH09821.1;Parent=gene-PUW31_06515;Dbxref=NCBI_GP:WJH09821.1;Name=WJH09821.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=PUW31_06515;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WJH09821.1;transl_table=11 CP118128.1 Genbank gene 1344392 1346137 . + . ID=gene-PUW31_06520;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=PUW31_06520 CP118128.1 Protein Homology CDS 1344392 1346137 . + 0 ID=cds-WJH09822.1;Parent=gene-PUW31_06520;Dbxref=NCBI_GP:WJH09822.1;Name=WJH09822.1;Ontology_term=GO:0009252,GO:0051301,GO:0008658,GO:0008955,GO:0005886;gbkey=CDS;gene=ftsI;go_component=plasma membrane|0005886||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460792.1;locus_tag=PUW31_06520;product=peptidoglycan glycosyltransferase FtsI;protein_id=WJH09822.1;transl_table=11 CP118128.1 Genbank gene 1346203 1347012 . + . ID=gene-PUW31_06525;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=PUW31_06525 CP118128.1 Protein Homology CDS 1346203 1347012 . + 0 ID=cds-WJH09823.1;Parent=gene-PUW31_06525;Dbxref=NCBI_GP:WJH09823.1;Name=WJH09823.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460791.1;locus_tag=PUW31_06525;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WJH09823.1;transl_table=11 CP118128.1 Genbank gene 1347009 1347575 . - . ID=gene-PUW31_06530;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=PUW31_06530 CP118128.1 Protein Homology CDS 1347009 1347575 . - 0 ID=cds-WJH09824.1;Parent=gene-PUW31_06530;Dbxref=NCBI_GP:WJH09824.1;Name=WJH09824.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=PUW31_06530;product=manganese efflux pump MntP;protein_id=WJH09824.1;transl_table=11 CP118128.1 cmsearch riboswitch 1347687 1347788 . - . ID=id-CP118128.1:1347687..1347788;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118128.1 Genbank pseudogene 1347985 1348443 . - . ID=gene-PUW31_06535;Name=PUW31_06535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_06535;pseudo=true CP118128.1 Protein Homology CDS 1347985 1348443 . - 0 ID=cds-PUW31_06535;Parent=gene-PUW31_06535;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=PUW31_06535;product=DUF986 family protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1348502 1349353 . - . ID=gene-PUW31_06540;Name=PUW31_06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06540 CP118128.1 Protein Homology CDS 1348502 1349353 . - 0 ID=cds-WJH09825.1;Parent=gene-PUW31_06540;Dbxref=NCBI_GP:WJH09825.1;Name=WJH09825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228151.1;locus_tag=PUW31_06540;product=PTS mannose transporter subunit IID;protein_id=WJH09825.1;transl_table=11 CP118128.1 Genbank gene 1349366 1350166 . - . ID=gene-PUW31_06545;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=PUW31_06545 CP118128.1 Protein Homology CDS 1349366 1350166 . - 0 ID=cds-WJH09826.1;Parent=gene-PUW31_06545;Dbxref=NCBI_GP:WJH09826.1;Name=WJH09826.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=PUW31_06545;product=PTS mannose transporter subunit IIC;protein_id=WJH09826.1;transl_table=11 CP118128.1 Genbank gene 1350219 1351187 . - . ID=gene-PUW31_06550;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=PUW31_06550 CP118128.1 Protein Homology CDS 1350219 1351187 . - 0 ID=cds-WJH09827.1;Parent=gene-PUW31_06550;Dbxref=NCBI_GP:WJH09827.1;Name=WJH09827.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460786.1;locus_tag=PUW31_06550;product=PTS mannose transporter subunit IIAB;protein_id=WJH09827.1;transl_table=11 CP118128.1 Genbank gene 1351660 1353219 . + . ID=gene-PUW31_06555;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=PUW31_06555 CP118128.1 Protein Homology CDS 1351660 1353219 . + 0 ID=cds-WJH09828.1;Parent=gene-PUW31_06555;Dbxref=NCBI_GP:WJH09828.1;Name=WJH09828.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460784.2;locus_tag=PUW31_06555;product=CNNM family cation transport protein YoaE;protein_id=WJH09828.1;transl_table=11 CP118128.1 Genbank gene 1353241 1354842 . - . ID=gene-PUW31_06560;Name=PUW31_06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06560 CP118128.1 Protein Homology CDS 1353241 1354842 . - 0 ID=cds-WJH09829.1;Parent=gene-PUW31_06560;Dbxref=NCBI_GP:WJH09829.1;Name=WJH09829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192512.1;locus_tag=PUW31_06560;product=cyclic diguanylate phosphodiesterase;protein_id=WJH09829.1;transl_table=11 CP118128.1 Genbank gene 1354980 1356344 . - . ID=gene-PUW31_06565;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=PUW31_06565 CP118128.1 Protein Homology CDS 1354980 1356344 . - 0 ID=cds-WJH09830.1;Parent=gene-PUW31_06565;Dbxref=NCBI_GP:WJH09830.1;Name=WJH09830.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460782.1;locus_tag=PUW31_06565;product=L-serine ammonia-lyase;protein_id=WJH09830.1;transl_table=11 CP118128.1 Genbank gene 1356608 1357186 . - . ID=gene-PUW31_06570;Name=PUW31_06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06570 CP118128.1 Protein Homology CDS 1356608 1357186 . - 0 ID=cds-WJH09831.1;Parent=gene-PUW31_06570;Dbxref=NCBI_GP:WJH09831.1;Name=WJH09831.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,CoA pyrophosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460781.1;locus_tag=PUW31_06570;product=CoA pyrophosphatase;protein_id=WJH09831.1;transl_table=11 CP118128.1 Genbank pseudogene 1357190 1358553 . - . ID=gene-PUW31_06575;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=pseudogene;locus_tag=PUW31_06575;pseudo=true CP118128.1 Protein Homology CDS 1357190 1358553 . - 0 ID=cds-PUW31_06575;Parent=gene-PUW31_06575;Note=frameshifted;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460780.1;locus_tag=PUW31_06575;product=aminodeoxychorismate synthase component 1;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1358634 1358813 . + . ID=gene-PUW31_06580;Name=PUW31_06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06580 CP118128.1 Protein Homology CDS 1358634 1358813 . + 0 ID=cds-WJH09832.1;Parent=gene-PUW31_06580;Dbxref=NCBI_GP:WJH09832.1;Name=WJH09832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460779.1;locus_tag=PUW31_06580;product=YoaH family protein;protein_id=WJH09832.1;transl_table=11 CP118128.1 Genbank gene 1358819 1359163 . - . ID=gene-PUW31_06585;Name=PUW31_06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06585 CP118128.1 Protein Homology CDS 1358819 1359163 . - 0 ID=cds-WJH09833.1;Parent=gene-PUW31_06585;Dbxref=NCBI_GP:WJH09833.1;Name=WJH09833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460778.1;locus_tag=PUW31_06585;product=RidA family protein;protein_id=WJH09833.1;transl_table=11 CP118128.1 Genbank pseudogene 1359294 1361203 . + . ID=gene-PUW31_06590;Name=PUW31_06590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_06590;pseudo=true CP118128.1 Protein Homology CDS 1359294 1361203 . + 0 ID=cds-PUW31_06590;Parent=gene-PUW31_06590;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460777.1;locus_tag=PUW31_06590;product=ATP-dependent DNA helicase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1361261 1361956 . + . ID=gene-PUW31_06595;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=PUW31_06595 CP118128.1 Protein Homology CDS 1361261 1361956 . + 0 ID=cds-WJH09834.1;Parent=gene-PUW31_06595;Dbxref=NCBI_GP:WJH09834.1;Name=WJH09834.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460776.1;locus_tag=PUW31_06595;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WJH09834.1;transl_table=11 CP118128.1 Genbank gene 1362028 1362609 . + . ID=gene-PUW31_06600;Name=PUW31_06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06600 CP118128.1 Protein Homology CDS 1362028 1362609 . + 0 ID=cds-WJH09835.1;Parent=gene-PUW31_06600;Dbxref=NCBI_GP:WJH09835.1;Name=WJH09835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460775.1;locus_tag=PUW31_06600;product=Slp family lipoprotein;protein_id=WJH09835.1;transl_table=11 CP118128.1 Genbank gene 1362814 1364499 . + . ID=gene-PUW31_06605;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=PUW31_06605 CP118128.1 Protein Homology CDS 1362814 1364499 . + 0 ID=cds-WJH09836.1;Parent=gene-PUW31_06605;Dbxref=NCBI_GP:WJH09836.1;Name=WJH09836.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460774.1;locus_tag=PUW31_06605;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WJH09836.1;transl_table=11 CP118128.1 Genbank gene 1364572 1365699 . + . ID=gene-PUW31_06610;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=PUW31_06610 CP118128.1 Protein Homology CDS 1364572 1365699 . + 0 ID=cds-WJH09837.1;Parent=gene-PUW31_06610;Dbxref=NCBI_GP:WJH09837.1;Name=WJH09837.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416318.1;locus_tag=PUW31_06610;product=ribonuclease D;protein_id=WJH09837.1;transl_table=11 CP118128.1 Genbank gene 1365821 1366087 . - . ID=gene-PUW31_06615;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=PUW31_06615 CP118128.1 Protein Homology CDS 1365821 1366087 . - 0 ID=cds-WJH09838.1;Parent=gene-PUW31_06615;Dbxref=NCBI_GP:WJH09838.1;Name=WJH09838.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460772.1;locus_tag=PUW31_06615;product=cell division topological specificity factor MinE;protein_id=WJH09838.1;transl_table=11 CP118128.1 Genbank gene 1366091 1366903 . - . ID=gene-PUW31_06620;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=PUW31_06620 CP118128.1 Protein Homology CDS 1366091 1366903 . - 0 ID=cds-WJH09839.1;Parent=gene-PUW31_06620;Dbxref=NCBI_GP:WJH09839.1;Name=WJH09839.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=PUW31_06620;product=septum site-determining protein MinD;protein_id=WJH09839.1;transl_table=11 CP118128.1 Genbank gene 1366927 1367634 . - . ID=gene-PUW31_06625;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=PUW31_06625 CP118128.1 Protein Homology CDS 1366927 1367634 . - 0 ID=cds-WJH09840.1;Parent=gene-PUW31_06625;Dbxref=NCBI_GP:WJH09840.1;Name=WJH09840.1;Ontology_term=GO:0000918,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460770.1;locus_tag=PUW31_06625;product=septum site-determining protein MinC;protein_id=WJH09840.1;transl_table=11 CP118128.1 Genbank gene 1367760 1368053 . + . ID=gene-PUW31_06630;Name=PUW31_06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06630 CP118128.1 Protein Homology CDS 1367760 1368053 . + 0 ID=cds-WJH09841.1;Parent=gene-PUW31_06630;Dbxref=NCBI_GP:WJH09841.1;Name=WJH09841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667868.1;locus_tag=PUW31_06630;product=YcgL domain-containing protein;protein_id=WJH09841.1;transl_table=11 CP118128.1 Genbank pseudogene 1368103 1368761 . + . ID=gene-PUW31_06635;Name=PUW31_06635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_06635;pseudo=true CP118128.1 Protein Homology CDS 1368103 1368761 . + 0 ID=cds-PUW31_06635;Parent=gene-PUW31_06635;Note=frameshifted;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460768.1;locus_tag=PUW31_06635;product=fumarylacetoacetate hydrolase family protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1368854 1369300 . + . ID=gene-PUW31_06640;Name=PUW31_06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06640 CP118128.1 Protein Homology CDS 1368854 1369300 . + 0 ID=cds-WJH09842.1;Parent=gene-PUW31_06640;Dbxref=NCBI_GP:WJH09842.1;Name=WJH09842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=PUW31_06640;product=YcgN family cysteine cluster protein;protein_id=WJH09842.1;transl_table=11 CP118128.1 Genbank gene 1369652 1369789 . + . ID=gene-PUW31_06645;Name=PUW31_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06645 CP118128.1 Protein Homology CDS 1369652 1369789 . + 0 ID=cds-WJH09843.1;Parent=gene-PUW31_06645;Dbxref=NCBI_GP:WJH09843.1;Name=WJH09843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460766.1;locus_tag=PUW31_06645;product=hypothetical protein;protein_id=WJH09843.1;transl_table=11 CP118128.1 Genbank gene 1369981 1370154 . + . ID=gene-PUW31_06650;Name=PUW31_06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06650 CP118128.1 Protein Homology CDS 1369981 1370154 . + 0 ID=cds-WJH09844.1;Parent=gene-PUW31_06650;Dbxref=NCBI_GP:WJH09844.1;Name=WJH09844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460765.1;locus_tag=PUW31_06650;product=addiction module toxin%2C GnsA/GnsB family;protein_id=WJH09844.1;transl_table=11 CP118128.1 Genbank gene 1370226 1370567 . - . ID=gene-PUW31_06655;Name=PUW31_06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06655 CP118128.1 Protein Homology CDS 1370226 1370567 . - 0 ID=cds-WJH09845.1;Parent=gene-PUW31_06655;Dbxref=NCBI_GP:WJH09845.1;Name=WJH09845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460764.1;locus_tag=PUW31_06655;product=DUF1971 domain-containing protein;protein_id=WJH09845.1;transl_table=11 CP118128.1 Genbank gene 1370676 1371206 . - . ID=gene-PUW31_06660;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=PUW31_06660 CP118128.1 Protein Homology CDS 1370676 1371206 . - 0 ID=cds-WJH09846.1;Parent=gene-PUW31_06660;Dbxref=NCBI_GP:WJH09846.1;Name=WJH09846.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460763.1;locus_tag=PUW31_06660;product=disulfide bond formation protein DsbB;protein_id=WJH09846.1;transl_table=11 CP118128.1 Genbank gene 1371348 1372892 . - . ID=gene-PUW31_06665;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=PUW31_06665 CP118128.1 Protein Homology CDS 1371348 1372892 . - 0 ID=cds-WJH09847.1;Parent=gene-PUW31_06665;Dbxref=NCBI_GP:WJH09847.1;Name=WJH09847.1;Ontology_term=GO:0006814,GO:1902600,GO:0015385;gbkey=CDS;gene=nhaB;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460762.1;locus_tag=PUW31_06665;product=Na(+)/H(+) antiporter NhaB;protein_id=WJH09847.1;transl_table=11 CP118128.1 Genbank gene 1373112 1373831 . + . ID=gene-PUW31_06670;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=PUW31_06670 CP118128.1 Protein Homology CDS 1373112 1373831 . + 0 ID=cds-WJH09848.1;Parent=gene-PUW31_06670;Dbxref=NCBI_GP:WJH09848.1;Name=WJH09848.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460761.1;locus_tag=PUW31_06670;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WJH09848.1;transl_table=11 CP118128.1 Genbank gene 1373878 1375410 . - . ID=gene-PUW31_06675;Name=PUW31_06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06675 CP118128.1 Protein Homology CDS 1373878 1375410 . - 0 ID=cds-WJH09849.1;Parent=gene-PUW31_06675;Dbxref=NCBI_GP:WJH09849.1;Name=WJH09849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460760.3;locus_tag=PUW31_06675;product=SpoVR family protein;protein_id=WJH09849.1;transl_table=11 CP118128.1 Genbank pseudogene 1375733 1377029 . + . ID=gene-PUW31_06680;Name=PUW31_06680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_06680;pseudo=true CP118128.1 Protein Homology CDS 1375733 1377029 . + 0 ID=cds-PUW31_06680;Parent=gene-PUW31_06680;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460759.1;locus_tag=PUW31_06680;product=D-amino acid dehydrogenase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1377043 1378113 . + . ID=gene-PUW31_06685;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=PUW31_06685 CP118128.1 Protein Homology CDS 1377043 1378113 . + 0 ID=cds-WJH09850.1;Parent=gene-PUW31_06685;Dbxref=NCBI_GP:WJH09850.1;Name=WJH09850.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460758.1;locus_tag=PUW31_06685;product=catabolic alanine racemase DadX;protein_id=WJH09850.1;transl_table=11 CP118128.1 Genbank gene 1378176 1379909 . - . ID=gene-PUW31_06690;Name=PUW31_06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06690 CP118128.1 Protein Homology CDS 1378176 1379909 . - 0 ID=cds-WJH09851.1;Parent=gene-PUW31_06690;Dbxref=NCBI_GP:WJH09851.1;Name=WJH09851.1;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460757.1;locus_tag=PUW31_06690;product=potassium/proton antiporter;protein_id=WJH09851.1;transl_table=11 CP118128.1 Genbank gene 1380006 1380920 . - . ID=gene-PUW31_06695;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=PUW31_06695 CP118128.1 Protein Homology CDS 1380006 1380920 . - 0 ID=cds-WJH09852.1;Parent=gene-PUW31_06695;Dbxref=NCBI_GP:WJH09852.1;Name=WJH09852.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460756.1;locus_tag=PUW31_06695;product=muramoyltetrapeptide carboxypeptidase;protein_id=WJH09852.1;transl_table=11 CP118128.1 Genbank gene 1381091 1381702 . + . ID=gene-PUW31_06700;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=PUW31_06700 CP118128.1 Protein Homology CDS 1381091 1381702 . + 0 ID=cds-WJH09853.1;Parent=gene-PUW31_06700;Dbxref=NCBI_GP:WJH09853.1;Name=WJH09853.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460755.1;locus_tag=PUW31_06700;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WJH09853.1;transl_table=11 CP118128.1 Genbank gene 1381716 1382450 . - . ID=gene-PUW31_06705;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=PUW31_06705 CP118128.1 Protein Homology CDS 1381716 1382450 . - 0 ID=cds-WJH09854.1;Parent=gene-PUW31_06705;Dbxref=NCBI_GP:WJH09854.1;Name=WJH09854.1;gbkey=CDS;gene=ycgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460754.1;locus_tag=PUW31_06705;product=flagellar brake protein YcgR;protein_id=WJH09854.1;transl_table=11 CP118128.1 Genbank gene 1382619 1382873 . + . ID=gene-PUW31_06710;Name=PUW31_06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06710 CP118128.1 Protein Homology CDS 1382619 1382873 . + 0 ID=cds-WJH09855.1;Parent=gene-PUW31_06710;Dbxref=NCBI_GP:WJH09855.1;Name=WJH09855.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460753.1;locus_tag=PUW31_06710;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WJH09855.1;transl_table=11 CP118128.1 Genbank gene 1382936 1384648 . - . ID=gene-PUW31_06715;Name=PUW31_06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06715 CP118128.1 Protein Homology CDS 1382936 1384648 . - 0 ID=cds-WJH10685.1;Parent=gene-PUW31_06715;Dbxref=NCBI_GP:WJH10685.1;Name=WJH10685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460752.1;locus_tag=PUW31_06715;product=alpha%2Calpha-trehalase;protein_id=WJH10685.1;transl_table=11 CP118128.1 Genbank gene 1384862 1386136 . - . ID=gene-PUW31_06720;Name=PUW31_06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06720 CP118128.1 Protein Homology CDS 1384862 1386136 . - 0 ID=cds-WJH09856.1;Parent=gene-PUW31_06720;Dbxref=NCBI_GP:WJH09856.1;Name=WJH09856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=PUW31_06720;product=Glu/Leu/Phe/Val dehydrogenase;protein_id=WJH09856.1;transl_table=11 CP118128.1 Genbank gene 1386531 1386620 . - . ID=gene-PUW31_06725;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=PUW31_06725 CP118128.1 Protein Homology CDS 1386531 1386620 . - 0 ID=cds-WJH09857.1;Parent=gene-PUW31_06725;Dbxref=NCBI_GP:WJH09857.1;Name=WJH09857.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460750.1;locus_tag=PUW31_06725;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WJH09857.1;transl_table=11 CP118128.1 Genbank gene 1386633 1387769 . - . ID=gene-PUW31_06730;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=PUW31_06730 CP118128.1 Protein Homology CDS 1386633 1387769 . - 0 ID=cds-WJH09858.1;Parent=gene-PUW31_06730;Dbxref=NCBI_GP:WJH09858.1;Name=WJH09858.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460749.1;locus_tag=PUW31_06730;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WJH09858.1;transl_table=11 CP118128.1 Genbank pseudogene 1387781 1389324 . - . ID=gene-PUW31_06735;Name=appC;gbkey=Gene;gene=appC;gene_biotype=pseudogene;locus_tag=PUW31_06735;pseudo=true CP118128.1 Protein Homology CDS 1387781 1389324 . - 0 ID=cds-PUW31_06735;Parent=gene-PUW31_06735;Note=frameshifted;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460748.1;locus_tag=PUW31_06735;product=cytochrome bd-II oxidase subunit 1;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 1389399 1390247 . - . ID=gene-PUW31_06740;Name=PUW31_06740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_06740;pseudo=true CP118128.1 Protein Homology CDS 1389399 1390247 . - 0 ID=cds-PUW31_06740;Parent=gene-PUW31_06740;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460747.1;locus_tag=PUW31_06740;product=hydrogenase expression/formation protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1390244 1390648 . - . ID=gene-PUW31_06745;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=PUW31_06745 CP118128.1 Protein Homology CDS 1390244 1390648 . - 0 ID=cds-WJH09859.1;Parent=gene-PUW31_06745;Dbxref=NCBI_GP:WJH09859.1;Name=WJH09859.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460746.1;locus_tag=PUW31_06745;product=hydrogenase-1 operon protein HyaE;protein_id=WJH09859.1;transl_table=11 CP118128.1 Genbank gene 1390638 1391234 . - . ID=gene-PUW31_06750;Name=PUW31_06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06750 CP118128.1 Protein Homology CDS 1390638 1391234 . - 0 ID=cds-WJH09860.1;Parent=gene-PUW31_06750;Dbxref=NCBI_GP:WJH09860.1;Name=WJH09860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460745.1;locus_tag=PUW31_06750;product=hydrogenase 1 maturation protease;protein_id=WJH09860.1;transl_table=11 CP118128.1 Genbank pseudogene 1391231 1391961 . - . ID=gene-PUW31_06755;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=pseudogene;locus_tag=PUW31_06755;pseudo=true CP118128.1 Protein Homology CDS 1391231 1391961 . - 0 ID=cds-PUW31_06755;Parent=gene-PUW31_06755;Note=frameshifted;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460744.1;locus_tag=PUW31_06755;product=Ni/Fe-hydrogenase b-type cytochrome subunit;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1391980 1393773 . - . ID=gene-PUW31_06760;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=PUW31_06760 CP118128.1 Protein Homology CDS 1391980 1393773 . - 0 ID=cds-WJH09861.1;Parent=gene-PUW31_06760;Dbxref=NCBI_GP:WJH09861.1;Name=WJH09861.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460743.1;locus_tag=PUW31_06760;product=Ni/Fe-hydrogenase large subunit;protein_id=WJH09861.1;transl_table=11 CP118128.1 Genbank gene 1393770 1394888 . - . ID=gene-PUW31_06765;Name=PUW31_06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06765 CP118128.1 Protein Homology CDS 1393770 1394888 . - 0 ID=cds-WJH09862.1;Parent=gene-PUW31_06765;Dbxref=NCBI_GP:WJH09862.1;Name=WJH09862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460742.1;locus_tag=PUW31_06765;product=hydrogenase 1 small subunit;protein_id=WJH09862.1;transl_table=11 CP118128.1 Genbank gene 1395803 1396255 . - . ID=gene-PUW31_06770;Name=PUW31_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06770 CP118128.1 Protein Homology CDS 1395803 1396255 . - 0 ID=cds-WJH09863.1;Parent=gene-PUW31_06770;Dbxref=NCBI_GP:WJH09863.1;Name=WJH09863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000487332.1;locus_tag=PUW31_06770;product=hypothetical protein;protein_id=WJH09863.1;transl_table=11 CP118128.1 Genbank gene 1396294 1396914 . - . ID=gene-PUW31_06775;Name=PUW31_06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06775 CP118128.1 Protein Homology CDS 1396294 1396914 . - 0 ID=cds-WJH09864.1;Parent=gene-PUW31_06775;Dbxref=NCBI_GP:WJH09864.1;Name=WJH09864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376822.1;locus_tag=PUW31_06775;product=hypothetical protein;protein_id=WJH09864.1;transl_table=11 CP118128.1 Genbank gene 1397673 1398764 . - . ID=gene-PUW31_06780;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=PUW31_06780 CP118128.1 Protein Homology CDS 1397673 1398764 . - 0 ID=cds-WJH09865.1;Parent=gene-PUW31_06780;Dbxref=NCBI_GP:WJH09865.1;Name=WJH09865.1;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=PUW31_06780;product=redox-regulated ATPase YchF;protein_id=WJH09865.1;transl_table=11 CP118128.1 Genbank gene 1398881 1399465 . - . ID=gene-PUW31_06785;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=PUW31_06785 CP118128.1 Protein Homology CDS 1398881 1399465 . - 0 ID=cds-WJH09866.1;Parent=gene-PUW31_06785;Dbxref=NCBI_GP:WJH09866.1;Name=WJH09866.1;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=PUW31_06785;product=aminoacyl-tRNA hydrolase;protein_id=WJH09866.1;transl_table=11 CP118128.1 Genbank gene 1399741 1400019 . + . ID=gene-PUW31_06790;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=PUW31_06790 CP118128.1 Protein Homology CDS 1399741 1400019 . + 0 ID=cds-WJH09867.1;Parent=gene-PUW31_06790;Dbxref=NCBI_GP:WJH09867.1;Name=WJH09867.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460738.1;locus_tag=PUW31_06790;product=stress-induced protein YchH;protein_id=WJH09867.1;transl_table=11 CP118128.1 Genbank gene 1400064 1401749 . - . ID=gene-PUW31_06795;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=PUW31_06795 CP118128.1 Protein Homology CDS 1400064 1401749 . - 0 ID=cds-WJH09868.1;Parent=gene-PUW31_06795;Dbxref=NCBI_GP:WJH09868.1;Name=WJH09868.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525165.1;locus_tag=PUW31_06795;product=C4-dicarboxylic acid transporter DauA;protein_id=WJH09868.1;transl_table=11 CP118128.1 Genbank gene 1401874 1402821 . - . ID=gene-PUW31_06800;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=PUW31_06800 CP118128.1 Protein Homology CDS 1401874 1402821 . - 0 ID=cds-WJH09869.1;Parent=gene-PUW31_06800;Dbxref=NCBI_GP:WJH09869.1;Name=WJH09869.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=PUW31_06800;product=ribose-phosphate diphosphokinase;protein_id=WJH09869.1;transl_table=11 CP118128.1 Genbank gene 1403087 1403938 . - . ID=gene-PUW31_06805;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=PUW31_06805 CP118128.1 Protein Homology CDS 1403087 1403938 . - 0 ID=cds-WJH09870.1;Parent=gene-PUW31_06805;Dbxref=NCBI_GP:WJH09870.1;Name=WJH09870.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460735.1;locus_tag=PUW31_06805;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WJH09870.1;transl_table=11 CP118128.1 Genbank gene 1403935 1404558 . - . ID=gene-PUW31_06810;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=PUW31_06810 CP118128.1 Protein Homology CDS 1403935 1404558 . - 0 ID=cds-WJH09871.1;Parent=gene-PUW31_06810;Dbxref=NCBI_GP:WJH09871.1;Name=WJH09871.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolB;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460734.1;locus_tag=PUW31_06810;product=lipoprotein insertase outer membrane protein LolB;protein_id=WJH09871.1;transl_table=11 CP118128.1 Genbank gene 1404872 1406128 . + . ID=gene-PUW31_06815;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=PUW31_06815 CP118128.1 Protein Homology CDS 1404872 1406128 . + 0 ID=cds-WJH09872.1;Parent=gene-PUW31_06815;Dbxref=NCBI_GP:WJH09872.1;Name=WJH09872.1;Ontology_term=GO:0006779,GO:0008883,GO:0005737;gbkey=CDS;gene=hemA;go_component=cytoplasm|0005737||IEA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=PUW31_06815;product=glutamyl-tRNA reductase;protein_id=WJH09872.1;transl_table=11 CP118128.1 Genbank gene 1406169 1407251 . + . ID=gene-PUW31_06820;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=PUW31_06820 CP118128.1 Protein Homology CDS 1406169 1407251 . + 0 ID=cds-WJH09873.1;Parent=gene-PUW31_06820;Dbxref=NCBI_GP:WJH09873.1;Name=WJH09873.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=PUW31_06820;product=peptide chain release factor 1;protein_id=WJH09873.1;transl_table=11 CP118128.1 Genbank gene 1407251 1408084 . + . ID=gene-PUW31_06825;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=PUW31_06825 CP118128.1 Protein Homology CDS 1407251 1408084 . + 0 ID=cds-WJH09874.1;Parent=gene-PUW31_06825;Dbxref=NCBI_GP:WJH09874.1;Name=WJH09874.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460731.1;locus_tag=PUW31_06825;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WJH09874.1;transl_table=11 CP118128.1 Genbank gene 1408081 1408470 . + . ID=gene-PUW31_06830;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=PUW31_06830 CP118128.1 Protein Homology CDS 1408081 1408470 . + 0 ID=cds-WJH09875.1;Parent=gene-PUW31_06830;Dbxref=NCBI_GP:WJH09875.1;Name=WJH09875.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460730.1;locus_tag=PUW31_06830;product=invasion regulator SirB2;protein_id=WJH09875.1;transl_table=11 CP118128.1 Genbank gene 1408474 1409283 . + . ID=gene-PUW31_06835;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=PUW31_06835 CP118128.1 Protein Homology CDS 1408474 1409283 . + 0 ID=cds-WJH09876.1;Parent=gene-PUW31_06835;Dbxref=NCBI_GP:WJH09876.1;Name=WJH09876.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460729.1;locus_tag=PUW31_06835;product=invasion regulator SirB1;protein_id=WJH09876.1;transl_table=11 CP118128.1 Genbank gene 1409321 1410175 . + . ID=gene-PUW31_06840;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=PUW31_06840 CP118128.1 Protein Homology CDS 1409321 1410175 . + 0 ID=cds-WJH09877.1;Parent=gene-PUW31_06840;Dbxref=NCBI_GP:WJH09877.1;Name=WJH09877.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460728.1;locus_tag=PUW31_06840;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WJH09877.1;transl_table=11 CP118128.1 Genbank gene 1410229 1411329 . - . ID=gene-PUW31_06845;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=PUW31_06845 CP118128.1 Protein Homology CDS 1410229 1411329 . - 0 ID=cds-WJH09878.1;Parent=gene-PUW31_06845;Dbxref=NCBI_GP:WJH09878.1;Name=WJH09878.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460727.1;locus_tag=PUW31_06845;product=sodium-potassium/proton antiporter ChaA;protein_id=WJH09878.1;transl_table=11 CP118128.1 Genbank gene 1411596 1411826 . + . ID=gene-PUW31_06850;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=PUW31_06850 CP118128.1 Protein Homology CDS 1411596 1411826 . + 0 ID=cds-WJH09879.1;Parent=gene-PUW31_06850;Dbxref=NCBI_GP:WJH09879.1;Name=WJH09879.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460726.1;locus_tag=PUW31_06850;product=putative cation transport regulator ChaB;protein_id=WJH09879.1;transl_table=11 CP118128.1 Genbank gene 1411906 1412259 . - . ID=gene-PUW31_06855;Name=PUW31_06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06855 CP118128.1 Protein Homology CDS 1411906 1412259 . - 0 ID=cds-WJH09880.1;Parent=gene-PUW31_06855;Dbxref=NCBI_GP:WJH09880.1;Name=WJH09880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460725.1;locus_tag=PUW31_06855;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=WJH09880.1;transl_table=11 CP118128.1 Genbank gene 1412436 1413860 . + . ID=gene-PUW31_06860;Name=PUW31_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06860 CP118128.1 Protein Homology CDS 1412436 1413860 . + 0 ID=cds-WJH09881.1;Parent=gene-PUW31_06860;Dbxref=NCBI_GP:WJH09881.1;Name=WJH09881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460724.3;locus_tag=PUW31_06860;product=YchO/YchP family invasin;protein_id=WJH09881.1;transl_table=11 CP118128.1 Genbank gene 1413861 1414511 . - . ID=gene-PUW31_06865;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=PUW31_06865 CP118128.1 Protein Homology CDS 1413861 1414511 . - 0 ID=cds-WJH09882.1;Parent=gene-PUW31_06865;Dbxref=NCBI_GP:WJH09882.1;Name=WJH09882.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460723.1;locus_tag=PUW31_06865;product=two-component system response regulator NarL;protein_id=WJH09882.1;transl_table=11 CP118128.1 Genbank pseudogene 1414504 1416299 . - . ID=gene-PUW31_06870;Name=narX;gbkey=Gene;gene=narX;gene_biotype=pseudogene;locus_tag=PUW31_06870;pseudo=true CP118128.1 Protein Homology CDS 1414504 1416299 . - 0 ID=cds-PUW31_06870;Parent=gene-PUW31_06870;Note=frameshifted;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460722.1;locus_tag=PUW31_06870;product=nitrate/nitrite two-component system sensor histidine kinase NarX;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1416640 1418037 . + . ID=gene-PUW31_06875;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=PUW31_06875 CP118128.1 Protein Homology CDS 1416640 1418037 . + 0 ID=cds-WJH09883.1;Parent=gene-PUW31_06875;Dbxref=NCBI_GP:WJH09883.1;Name=WJH09883.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460721.1;locus_tag=PUW31_06875;product=nitrate transporter NarK;protein_id=WJH09883.1;transl_table=11 CP118128.1 Genbank gene 1418424 1422167 . + . ID=gene-PUW31_06880;Name=PUW31_06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06880 CP118128.1 Protein Homology CDS 1418424 1422167 . + 0 ID=cds-WJH09884.1;Parent=gene-PUW31_06880;Dbxref=NCBI_GP:WJH09884.1;Name=WJH09884.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=PUW31_06880;product=nitrate reductase subunit alpha;protein_id=WJH09884.1;transl_table=11 CP118128.1 Genbank gene 1422164 1423702 . + . ID=gene-PUW31_06885;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=PUW31_06885 CP118128.1 Protein Homology CDS 1422164 1423702 . + 0 ID=cds-WJH09885.1;Parent=gene-PUW31_06885;Dbxref=NCBI_GP:WJH09885.1;Name=WJH09885.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460719.1;locus_tag=PUW31_06885;product=nitrate reductase subunit beta;protein_id=WJH09885.1;transl_table=11 CP118128.1 Genbank gene 1423699 1424409 . + . ID=gene-PUW31_06890;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=PUW31_06890 CP118128.1 Protein Homology CDS 1423699 1424409 . + 0 ID=cds-WJH09886.1;Parent=gene-PUW31_06890;Dbxref=NCBI_GP:WJH09886.1;Name=WJH09886.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460718.1;locus_tag=PUW31_06890;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WJH09886.1;transl_table=11 CP118128.1 Genbank gene 1424409 1425086 . + . ID=gene-PUW31_06895;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=PUW31_06895 CP118128.1 Protein Homology CDS 1424409 1425086 . + 0 ID=cds-WJH09887.1;Parent=gene-PUW31_06895;Dbxref=NCBI_GP:WJH09887.1;Name=WJH09887.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460717.1;locus_tag=PUW31_06895;product=respiratory nitrate reductase subunit gamma;protein_id=WJH09887.1;transl_table=11 CP118128.1 Genbank pseudogene 1425328 1426855 . + . ID=gene-PUW31_06900;Name=PUW31_06900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_06900;pseudo=true CP118128.1 Protein Homology CDS 1425328 1426855 . + 0 ID=cds-PUW31_06900;Parent=gene-PUW31_06900;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460716.1;locus_tag=PUW31_06900;product=tetratricopeptide repeat protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1426958 1427089 . - . ID=gene-PUW31_06905;Name=PUW31_06905;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PUW31_06905 CP118128.1 cmsearch ncRNA 1426958 1427089 . - . ID=rna-PUW31_06905;Parent=gene-PUW31_06905;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_06905;product=RtT sRNA CP118128.1 cmsearch exon 1426958 1427089 . - . ID=exon-PUW31_06905-1;Parent=rna-PUW31_06905;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_06905;product=RtT sRNA CP118128.1 Genbank gene 1427133 1427263 . - . ID=gene-PUW31_06910;Name=PUW31_06910;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PUW31_06910 CP118128.1 cmsearch ncRNA 1427133 1427263 . - . ID=rna-PUW31_06910;Parent=gene-PUW31_06910;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_06910;product=RtT sRNA CP118128.1 cmsearch exon 1427133 1427263 . - . ID=exon-PUW31_06910-1;Parent=rna-PUW31_06910;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_06910;product=RtT sRNA CP118128.1 Genbank gene 1427307 1427438 . - . ID=gene-PUW31_06915;Name=PUW31_06915;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PUW31_06915 CP118128.1 cmsearch ncRNA 1427307 1427438 . - . ID=rna-PUW31_06915;Parent=gene-PUW31_06915;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_06915;product=RtT sRNA CP118128.1 cmsearch exon 1427307 1427438 . - . ID=exon-PUW31_06915-1;Parent=rna-PUW31_06915;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_06915;product=RtT sRNA CP118128.1 Genbank gene 1427482 1427613 . - . ID=gene-PUW31_06920;Name=PUW31_06920;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PUW31_06920 CP118128.1 cmsearch ncRNA 1427482 1427613 . - . ID=rna-PUW31_06920;Parent=gene-PUW31_06920;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_06920;product=RtT sRNA CP118128.1 cmsearch exon 1427482 1427613 . - . ID=exon-PUW31_06920-1;Parent=rna-PUW31_06920;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_06920;product=RtT sRNA CP118128.1 Genbank gene 1427657 1427741 . - . ID=gene-PUW31_06925;Name=PUW31_06925;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_06925 CP118128.1 tRNAscan-SE tRNA 1427657 1427741 . - . ID=rna-PUW31_06925;Parent=gene-PUW31_06925;anticodon=(pos:complement(1427705..1427707));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_06925;product=tRNA-Tyr CP118128.1 tRNAscan-SE exon 1427657 1427741 . - . ID=exon-PUW31_06925-1;Parent=rna-PUW31_06925;anticodon=(pos:complement(1427705..1427707));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_06925;product=tRNA-Tyr CP118128.1 Genbank gene 1427770 1427911 . - . ID=gene-PUW31_06930;Name=PUW31_06930;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PUW31_06930 CP118128.1 cmsearch ncRNA 1427770 1427911 . - . ID=rna-PUW31_06930;Parent=gene-PUW31_06930;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_06930;product=RtT sRNA CP118128.1 cmsearch exon 1427770 1427911 . - . ID=exon-PUW31_06930-1;Parent=rna-PUW31_06930;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_06930;product=RtT sRNA CP118128.1 Genbank gene 1428082 1428924 . - . ID=gene-PUW31_06935;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=PUW31_06935 CP118128.1 Protein Homology CDS 1428082 1428924 . - 0 ID=cds-WJH09888.1;Parent=gene-PUW31_06935;Dbxref=NCBI_GP:WJH09888.1;Name=WJH09888.1;Ontology_term=GO:0009152,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460715.1;locus_tag=PUW31_06935;product=formyltetrahydrofolate deformylase;protein_id=WJH09888.1;transl_table=11 CP118128.1 Genbank gene 1428975 1429433 . - . ID=gene-PUW31_06940;Name=PUW31_06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06940 CP118128.1 Protein Homology CDS 1428975 1429433 . - 0 ID=cds-WJH09889.1;Parent=gene-PUW31_06940;Dbxref=NCBI_GP:WJH09889.1;Name=WJH09889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460714.1;locus_tag=PUW31_06940;product=YchJ family protein;protein_id=WJH09889.1;transl_table=11 CP118128.1 Genbank gene 1429544 1430449 . + . ID=gene-PUW31_06945;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=PUW31_06945 CP118128.1 Protein Homology CDS 1429544 1430449 . + 0 ID=cds-WJH09890.1;Parent=gene-PUW31_06945;Dbxref=NCBI_GP:WJH09890.1;Name=WJH09890.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460713.1;locus_tag=PUW31_06945;product=patatin-like phospholipase RssA;protein_id=WJH09890.1;transl_table=11 CP118128.1 Genbank gene 1430540 1431553 . + . ID=gene-PUW31_06950;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=PUW31_06950 CP118128.1 Protein Homology CDS 1430540 1431553 . + 0 ID=cds-WJH09891.1;Parent=gene-PUW31_06950;Dbxref=NCBI_GP:WJH09891.1;Name=WJH09891.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460712.1;locus_tag=PUW31_06950;product=two-component system response regulator RssB;protein_id=WJH09891.1;transl_table=11 CP118128.1 Genbank gene 1431756 1432664 . + . ID=gene-PUW31_06955;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=PUW31_06955 CP118128.1 Protein Homology CDS 1431756 1432664 . + 0 ID=cds-WJH09892.1;Parent=gene-PUW31_06955;Dbxref=NCBI_GP:WJH09892.1;Name=WJH09892.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460711.1;locus_tag=PUW31_06955;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WJH09892.1;transl_table=11 CP118128.1 Genbank gene 1432796 1433209 . - . ID=gene-PUW31_06960;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=PUW31_06960 CP118128.1 Protein Homology CDS 1432796 1433209 . - 0 ID=cds-WJH09893.1;Parent=gene-PUW31_06960;Dbxref=NCBI_GP:WJH09893.1;Name=WJH09893.1;gbkey=CDS;gene=hns;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460710.1;locus_tag=PUW31_06960;product=DNA-binding transcriptional regulator H-NS;protein_id=WJH09893.1;transl_table=11 CP118128.1 Genbank gene 1433872 1434489 . + . ID=gene-PUW31_06965;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=PUW31_06965 CP118128.1 Protein Homology CDS 1433872 1434489 . + 0 ID=cds-WJH09894.1;Parent=gene-PUW31_06965;Dbxref=NCBI_GP:WJH09894.1;Name=WJH09894.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460709.1;locus_tag=PUW31_06965;product=thymidine kinase;protein_id=WJH09894.1;transl_table=11 CP118128.1 Genbank pseudogene 1434686 1437363 . - . ID=gene-PUW31_06970;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=pseudogene;gene_synonym=adhC;locus_tag=PUW31_06970;pseudo=true CP118128.1 Protein Homology CDS 1434686 1437363 . - 0 ID=cds-PUW31_06970;Parent=gene-PUW31_06970;Note=frameshifted;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=PUW31_06970;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1437840 1438487 . + . ID=gene-PUW31_06975;Name=PUW31_06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_06975 CP118128.1 Protein Homology CDS 1437840 1438487 . + 0 ID=cds-WJH09895.1;Parent=gene-PUW31_06975;Dbxref=NCBI_GP:WJH09895.1;Name=WJH09895.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460707.1;locus_tag=PUW31_06975;product=YchE family NAAT transporter;protein_id=WJH09895.1;transl_table=11 CP118128.1 Genbank gene 1439241 1440872 . + . ID=gene-PUW31_06980;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=PUW31_06980 CP118128.1 Protein Homology CDS 1439241 1440872 . + 0 ID=cds-WJH09896.1;Parent=gene-PUW31_06980;Dbxref=NCBI_GP:WJH09896.1;Name=WJH09896.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675662.1;locus_tag=PUW31_06980;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WJH09896.1;transl_table=11 CP118128.1 Genbank gene 1440994 1441914 . + . ID=gene-PUW31_06985;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=PUW31_06985 CP118128.1 Protein Homology CDS 1440994 1441914 . + 0 ID=cds-WJH09897.1;Parent=gene-PUW31_06985;Dbxref=NCBI_GP:WJH09897.1;Name=WJH09897.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=PUW31_06985;product=oligopeptide ABC transporter permease OppB;protein_id=WJH09897.1;transl_table=11 CP118128.1 Genbank gene 1441929 1442837 . + . ID=gene-PUW31_06990;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=PUW31_06990 CP118128.1 Protein Homology CDS 1441929 1442837 . + 0 ID=cds-WJH09898.1;Parent=gene-PUW31_06990;Dbxref=NCBI_GP:WJH09898.1;Name=WJH09898.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=PUW31_06990;product=oligopeptide ABC transporter permease OppC;protein_id=WJH09898.1;transl_table=11 CP118128.1 Genbank pseudogene 1442849 1443855 . + . ID=gene-PUW31_06995;Name=PUW31_06995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_06995;pseudo=true CP118128.1 Protein Homology CDS 1442849 1443855 . + 0 ID=cds-PUW31_06995;Parent=gene-PUW31_06995;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460702.1;locus_tag=PUW31_06995;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1443852 1444856 . + . ID=gene-PUW31_07000;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=PUW31_07000 CP118128.1 Protein Homology CDS 1443852 1444856 . + 0 ID=cds-WJH09899.1;Parent=gene-PUW31_07000;Dbxref=NCBI_GP:WJH09899.1;Name=WJH09899.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506804.1;locus_tag=PUW31_07000;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WJH09899.1;transl_table=11 CP118128.1 Genbank gene 1444904 1445740 . + . ID=gene-PUW31_07005;Name=PUW31_07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07005 CP118128.1 Protein Homology CDS 1444904 1445740 . + 0 ID=cds-WJH09900.1;Parent=gene-PUW31_07005;Dbxref=NCBI_GP:WJH09900.1;Name=WJH09900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460700.1;locus_tag=PUW31_07005;product=ion transporter;protein_id=WJH09900.1;transl_table=11 CP118128.1 Genbank gene 1445788 1446117 . - . ID=gene-PUW31_07010;Name=PUW31_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07010 CP118128.1 Protein Homology CDS 1445788 1446117 . - 0 ID=cds-WJH10686.1;Parent=gene-PUW31_07010;Dbxref=NCBI_GP:WJH10686.1;Name=WJH10686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448158.1;locus_tag=PUW31_07010;product=HI1450 family dsDNA-mimic protein;protein_id=WJH10686.1;transl_table=11 CP118128.1 Genbank gene 1446151 1447611 . - . ID=gene-PUW31_07015;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=PUW31_07015 CP118128.1 Protein Homology CDS 1446151 1447611 . - 0 ID=cds-WJH09901.1;Parent=gene-PUW31_07015;Dbxref=NCBI_GP:WJH09901.1;Name=WJH09901.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=PUW31_07015;product=cardiolipin synthase;protein_id=WJH09901.1;transl_table=11 CP118128.1 Genbank gene 1447754 1447927 . + . ID=gene-PUW31_07020;Name=PUW31_07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07020 CP118128.1 Protein Homology CDS 1447754 1447927 . + 0 ID=cds-WJH09902.1;Parent=gene-PUW31_07020;Dbxref=NCBI_GP:WJH09902.1;Name=WJH09902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=PUW31_07020;product=YciY family protein;protein_id=WJH09902.1;transl_table=11 CP118128.1 Genbank gene 1447971 1448267 . - . ID=gene-PUW31_07025;Name=PUW31_07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07025 CP118128.1 Protein Homology CDS 1447971 1448267 . - 0 ID=cds-WJH09903.1;Parent=gene-PUW31_07025;Dbxref=NCBI_GP:WJH09903.1;Name=WJH09903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460697.1;locus_tag=PUW31_07025;product=YciI family protein;protein_id=WJH09903.1;transl_table=11 CP118128.1 Genbank gene 1448491 1449219 . + . ID=gene-PUW31_07030;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=PUW31_07030 CP118128.1 Protein Homology CDS 1448491 1449219 . + 0 ID=cds-WJH10687.1;Parent=gene-PUW31_07030;Dbxref=NCBI_GP:WJH10687.1;Name=WJH10687.1;Ontology_term=GO:0015891,GO:0055085,GO:0015343,GO:0030288;gbkey=CDS;gene=tonB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460696.1;locus_tag=PUW31_07030;product=TonB system transport protein TonB;protein_id=WJH10687.1;transl_table=11 CP118128.1 Genbank gene 1449278 1449679 . - . ID=gene-PUW31_07035;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=PUW31_07035 CP118128.1 Protein Homology CDS 1449278 1449679 . - 0 ID=cds-WJH09904.1;Parent=gene-PUW31_07035;Dbxref=NCBI_GP:WJH09904.1;Name=WJH09904.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460695.1;locus_tag=PUW31_07035;product=acyl-CoA thioester hydrolase YciA;protein_id=WJH09904.1;transl_table=11 CP118128.1 Genbank gene 1449840 1450379 . - . ID=gene-PUW31_07040;Name=PUW31_07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07040 CP118128.1 Protein Homology CDS 1449840 1450379 . - 0 ID=cds-WJH09905.1;Parent=gene-PUW31_07040;Dbxref=NCBI_GP:WJH09905.1;Name=WJH09905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460694.1;locus_tag=PUW31_07040;product=septation protein A;protein_id=WJH09905.1;transl_table=11 CP118128.1 Genbank pseudogene 1450436 1451178 . - . ID=gene-PUW31_07045;Name=PUW31_07045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_07045;pseudo=true CP118128.1 Protein Homology CDS 1450436 1451178 . - 0 ID=cds-PUW31_07045;Parent=gene-PUW31_07045;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460693.1;locus_tag=PUW31_07045;product=YciC family protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1451204 1451608 . - . ID=gene-PUW31_07050;Name=PUW31_07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07050 CP118128.1 Protein Homology CDS 1451204 1451608 . - 0 ID=cds-WJH09906.1;Parent=gene-PUW31_07050;Dbxref=NCBI_GP:WJH09906.1;Name=WJH09906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=PUW31_07050;product=YkgJ family cysteine cluster protein;protein_id=WJH09906.1;transl_table=11 CP118128.1 Genbank gene 1451946 1452584 . + . ID=gene-PUW31_07055;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=PUW31_07055 CP118128.1 Protein Homology CDS 1451946 1452584 . + 0 ID=cds-WJH09907.1;Parent=gene-PUW31_07055;Dbxref=NCBI_GP:WJH09907.1;Name=WJH09907.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460691.1;locus_tag=PUW31_07055;product=outer membrane protein OmpW;protein_id=WJH09907.1;transl_table=11 CP118128.1 Genbank gene 1452666 1453544 . - . ID=gene-PUW31_07060;Name=PUW31_07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07060 CP118128.1 Protein Homology CDS 1452666 1453544 . - 0 ID=cds-WJH09908.1;Parent=gene-PUW31_07060;Dbxref=NCBI_GP:WJH09908.1;Name=WJH09908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460690.1;locus_tag=PUW31_07060;product=manganese catalase family protein;protein_id=WJH09908.1;transl_table=11 CP118128.1 Genbank gene 1453564 1454070 . - . ID=gene-PUW31_07065;Name=PUW31_07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07065 CP118128.1 Protein Homology CDS 1453564 1454070 . - 0 ID=cds-WJH09909.1;Parent=gene-PUW31_07065;Dbxref=NCBI_GP:WJH09909.1;Name=WJH09909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460689.1;locus_tag=PUW31_07065;product=ferritin-like domain-containing protein;protein_id=WJH09909.1;transl_table=11 CP118128.1 Genbank gene 1454144 1454647 . - . ID=gene-PUW31_07070;Name=PUW31_07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07070 CP118128.1 Protein Homology CDS 1454144 1454647 . - 0 ID=cds-WJH09910.1;Parent=gene-PUW31_07070;Dbxref=NCBI_GP:WJH09910.1;Name=WJH09910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460688.1;locus_tag=PUW31_07070;product=ferritin-like domain-containing protein;protein_id=WJH09910.1;transl_table=11 CP118128.1 Genbank gene 1454737 1454919 . - . ID=gene-PUW31_07075;Name=PUW31_07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07075 CP118128.1 Protein Homology CDS 1454737 1454919 . - 0 ID=cds-WJH09911.1;Parent=gene-PUW31_07075;Dbxref=NCBI_GP:WJH09911.1;Name=WJH09911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460687.1;locus_tag=PUW31_07075;product=general stress protein;protein_id=WJH09911.1;transl_table=11 CP118128.1 Genbank gene 1455399 1456205 . - . ID=gene-PUW31_07080;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=PUW31_07080 CP118128.1 Protein Homology CDS 1455399 1456205 . - 0 ID=cds-WJH09912.1;Parent=gene-PUW31_07080;Dbxref=NCBI_GP:WJH09912.1;Name=WJH09912.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460686.1;locus_tag=PUW31_07080;product=tryptophan synthase subunit alpha;protein_id=WJH09912.1;transl_table=11 CP118128.1 Genbank gene 1456205 1457398 . - . ID=gene-PUW31_07085;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=PUW31_07085 CP118128.1 Protein Homology CDS 1456205 1457398 . - 0 ID=cds-WJH09913.1;Parent=gene-PUW31_07085;Dbxref=NCBI_GP:WJH09913.1;Name=WJH09913.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460685.1;locus_tag=PUW31_07085;product=tryptophan synthase subunit beta;protein_id=WJH09913.1;transl_table=11 CP118128.1 Genbank pseudogene 1457408 1458765 . - . ID=gene-PUW31_07090;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=pseudogene;locus_tag=PUW31_07090;pseudo=true CP118128.1 Protein Homology CDS 1457408 1458765 . - 0 ID=cds-PUW31_07090;Parent=gene-PUW31_07090;Note=frameshifted;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460684.1;locus_tag=PUW31_07090;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1458769 1460364 . - . ID=gene-PUW31_07095;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=PUW31_07095 CP118128.1 Protein Homology CDS 1458769 1460364 . - 0 ID=cds-WJH09914.1;Parent=gene-PUW31_07095;Dbxref=NCBI_GP:WJH09914.1;Name=WJH09914.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=PUW31_07095;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WJH09914.1;transl_table=11 CP118128.1 Genbank gene 1460364 1461926 . - . ID=gene-PUW31_07100;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=PUW31_07100 CP118128.1 Protein Homology CDS 1460364 1461926 . - 0 ID=cds-WJH09915.1;Parent=gene-PUW31_07100;Dbxref=NCBI_GP:WJH09915.1;Name=WJH09915.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460682.1;locus_tag=PUW31_07100;product=anthranilate synthase component I;protein_id=WJH09915.1;transl_table=11 CP118128.1 cmsearch sequence_feature 1461949 1462044 . - . ID=id-CP118128.1:1461949..1462044;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 CP118128.1 Genbank gene 1462021 1462065 . - . ID=gene-PUW31_07105;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=PUW31_07105 CP118128.1 Protein Homology CDS 1462021 1462065 . - 0 ID=cds-WJH10688.1;Parent=gene-PUW31_07105;Dbxref=NCBI_GP:WJH10688.1;Name=WJH10688.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448140.1;locus_tag=PUW31_07105;product=trp operon leader peptide;protein_id=WJH10688.1;transl_table=11 CP118128.1 Genbank gene 1462187 1463068 . + . ID=gene-PUW31_07110;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=PUW31_07110 CP118128.1 Protein Homology CDS 1462187 1463068 . + 0 ID=cds-WJH09916.1;Parent=gene-PUW31_07110;Dbxref=NCBI_GP:WJH09916.1;Name=WJH09916.1;gbkey=CDS;gene=rnm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460680.1;locus_tag=PUW31_07110;product=RNase AM;protein_id=WJH09916.1;transl_table=11 CP118128.1 Genbank gene 1463076 1463696 . + . ID=gene-PUW31_07115;Name=PUW31_07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07115 CP118128.1 Protein Homology CDS 1463076 1463696 . + 0 ID=cds-WJH09917.1;Parent=gene-PUW31_07115;Dbxref=NCBI_GP:WJH09917.1;Name=WJH09917.1;Ontology_term=GO:0006400,GO:0061710;gbkey=CDS;go_function=L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=PUW31_07115;product=L-threonylcarbamoyladenylate synthase;protein_id=WJH09917.1;transl_table=11 CP118128.1 Genbank gene 1463797 1464672 . + . ID=gene-PUW31_07120;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=PUW31_07120 CP118128.1 Protein Homology CDS 1463797 1464672 . + 0 ID=cds-WJH09918.1;Parent=gene-PUW31_07120;Dbxref=NCBI_GP:WJH09918.1;Name=WJH09918.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460678.1;locus_tag=PUW31_07120;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WJH09918.1;transl_table=11 CP118128.1 Genbank pseudogene 1464759 1465349 . - . ID=gene-PUW31_07125;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=pseudogene;locus_tag=PUW31_07125;pseudo=true CP118128.1 Protein Homology CDS 1464759 1465349 . - 0 ID=cds-PUW31_07125;Parent=gene-PUW31_07125;Note=internal stop;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460677.1;locus_tag=PUW31_07125;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1465346 1466107 . - . ID=gene-PUW31_07130;Name=PUW31_07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07130 CP118128.1 Protein Homology CDS 1465346 1466107 . - 0 ID=cds-WJH09919.1;Parent=gene-PUW31_07130;Dbxref=NCBI_GP:WJH09919.1;Name=WJH09919.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460676.1;locus_tag=PUW31_07130;product=YciK family oxidoreductase;protein_id=WJH09919.1;transl_table=11 CP118128.1 Genbank gene 1466344 1467390 . + . ID=gene-PUW31_07135;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=PUW31_07135 CP118128.1 Protein Homology CDS 1466344 1467390 . + 0 ID=cds-WJH09920.1;Parent=gene-PUW31_07135;Dbxref=NCBI_GP:WJH09920.1;Name=WJH09920.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460675.1;locus_tag=PUW31_07135;product=protease SohB;protein_id=WJH09920.1;transl_table=11 CP118128.1 Genbank gene 1467432 1467683 . - . ID=gene-PUW31_07140;Name=PUW31_07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07140 CP118128.1 Protein Homology CDS 1467432 1467683 . - 0 ID=cds-WJH09921.1;Parent=gene-PUW31_07140;Dbxref=NCBI_GP:WJH09921.1;Name=WJH09921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460674.1;locus_tag=PUW31_07140;product=YciN family protein;protein_id=WJH09921.1;transl_table=11 CP118128.1 Genbank gene 1468086 1470683 . + . ID=gene-PUW31_07145;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=PUW31_07145 CP118128.1 Protein Homology CDS 1468086 1470683 . + 0 ID=cds-WJH09922.1;Parent=gene-PUW31_07145;Dbxref=NCBI_GP:WJH09922.1;Name=WJH09922.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=PUW31_07145;product=type I DNA topoisomerase;protein_id=WJH09922.1;transl_table=11 CP118128.1 Genbank gene 1471094 1472068 . + . ID=gene-PUW31_07150;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=PUW31_07150 CP118128.1 Protein Homology CDS 1471094 1472068 . + 0 ID=cds-WJH09923.1;Parent=gene-PUW31_07150;Dbxref=NCBI_GP:WJH09923.1;Name=WJH09923.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=PUW31_07150;product=HTH-type transcriptional regulator CysB;protein_id=WJH09923.1;transl_table=11 CP118128.1 Genbank gene 1472349 1472489 . + . ID=gene-PUW31_07155;Name=PUW31_07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07155 CP118128.1 Protein Homology CDS 1472349 1472489 . + 0 ID=cds-WJH10689.1;Parent=gene-PUW31_07155;Dbxref=NCBI_GP:WJH10689.1;Name=WJH10689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=PUW31_07155;product=YmiA family putative membrane protein;protein_id=WJH10689.1;transl_table=11 CP118128.1 Genbank gene 1472490 1472660 . + . ID=gene-PUW31_07160;Name=PUW31_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07160 CP118128.1 Protein Homology CDS 1472490 1472660 . + 0 ID=cds-WJH09924.1;Parent=gene-PUW31_07160;Dbxref=NCBI_GP:WJH09924.1;Name=WJH09924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000029022.1;locus_tag=PUW31_07160;product=hypothetical protein;protein_id=WJH09924.1;transl_table=11 CP118128.1 Genbank gene 1472770 1472862 . + . ID=gene-PUW31_07165;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=PUW31_07165 CP118128.1 Protein Homology CDS 1472770 1472862 . + 0 ID=cds-WJH09925.1;Parent=gene-PUW31_07165;Dbxref=NCBI_GP:WJH09925.1;Name=WJH09925.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013096370.1;locus_tag=PUW31_07165;product=small membrane protein YmiC;protein_id=WJH09925.1;transl_table=11 CP118128.1 Genbank gene 1473045 1475720 . + . ID=gene-PUW31_07170;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=PUW31_07170 CP118128.1 Protein Homology CDS 1473045 1475720 . + 0 ID=cds-WJH09926.1;Parent=gene-PUW31_07170;Dbxref=NCBI_GP:WJH09926.1;Name=WJH09926.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460671.1;locus_tag=PUW31_07170;product=aconitate hydratase AcnA;protein_id=WJH09926.1;transl_table=11 CP118128.1 Genbank gene 1475776 1476366 . - . ID=gene-PUW31_07175;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=PUW31_07175 CP118128.1 Protein Homology CDS 1475776 1476366 . - 0 ID=cds-WJH09927.1;Parent=gene-PUW31_07175;Dbxref=NCBI_GP:WJH09927.1;Name=WJH09927.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460670.1;locus_tag=PUW31_07175;product=GTP cyclohydrolase II;protein_id=WJH09927.1;transl_table=11 CP118128.1 Genbank gene 1476562 1477326 . + . ID=gene-PUW31_07180;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=PUW31_07180 CP118128.1 Protein Homology CDS 1476562 1477326 . + 0 ID=cds-WJH09928.1;Parent=gene-PUW31_07180;Dbxref=NCBI_GP:WJH09928.1;Name=WJH09928.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460669.1;locus_tag=PUW31_07180;product=phosphatidylglycerophosphatase B;protein_id=WJH09928.1;transl_table=11 CP118128.1 Genbank gene 1477476 1477784 . + . ID=gene-PUW31_07185;Name=PUW31_07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07185 CP118128.1 Protein Homology CDS 1477476 1477784 . + 0 ID=cds-WJH09929.1;Parent=gene-PUW31_07185;Dbxref=NCBI_GP:WJH09929.1;Name=WJH09929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460668.1;locus_tag=PUW31_07185;product=LapA family protein;protein_id=WJH09929.1;transl_table=11 CP118128.1 Genbank gene 1477791 1478960 . + . ID=gene-PUW31_07190;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=PUW31_07190 CP118128.1 Protein Homology CDS 1477791 1478960 . + 0 ID=cds-WJH09930.1;Parent=gene-PUW31_07190;Dbxref=NCBI_GP:WJH09930.1;Name=WJH09930.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=PUW31_07190;product=lipopolysaccharide assembly protein LapB;protein_id=WJH09930.1;transl_table=11 CP118128.1 Genbank gene 1479151 1479888 . + . ID=gene-PUW31_07195;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=PUW31_07195 CP118128.1 Protein Homology CDS 1479151 1479888 . + 0 ID=cds-WJH09931.1;Parent=gene-PUW31_07195;Dbxref=NCBI_GP:WJH09931.1;Name=WJH09931.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460666.1;locus_tag=PUW31_07195;product=orotidine-5'-phosphate decarboxylase;protein_id=WJH09931.1;transl_table=11 CP118128.1 Genbank gene 1479888 1480214 . + . ID=gene-PUW31_07200;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=PUW31_07200 CP118128.1 Protein Homology CDS 1479888 1480214 . + 0 ID=cds-WJH09932.1;Parent=gene-PUW31_07200;Dbxref=NCBI_GP:WJH09932.1;Name=WJH09932.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460665.1;locus_tag=PUW31_07200;product=stress response translation initiation inhibitor YciH;protein_id=WJH09932.1;transl_table=11 CP118128.1 Genbank gene 1480334 1480552 . - . ID=gene-PUW31_07205;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=PUW31_07205 CP118128.1 Protein Homology CDS 1480334 1480552 . - 0 ID=cds-WJH09933.1;Parent=gene-PUW31_07205;Dbxref=NCBI_GP:WJH09933.1;Name=WJH09933.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460664.1;locus_tag=PUW31_07205;product=osmotically-inducible lipoprotein OsmB;protein_id=WJH09933.1;transl_table=11 CP118128.1 Genbank pseudogene 1480811 1481562 . - . ID=gene-PUW31_07210;Name=PUW31_07210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_07210;pseudo=true CP118128.1 Protein Homology CDS 1480811 1481562 . - 0 ID=cds-PUW31_07210;Parent=gene-PUW31_07210;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460663.1;locus_tag=PUW31_07210;product=DNA-binding transcriptional regulator YciT;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1481649 1481828 . - . ID=gene-PUW31_07215;Name=PUW31_07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07215 CP118128.1 Protein Homology CDS 1481649 1481828 . - 0 ID=cds-WJH09934.1;Parent=gene-PUW31_07215;Dbxref=NCBI_GP:WJH09934.1;Name=WJH09934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279854.1;locus_tag=PUW31_07215;product=hypothetical protein;protein_id=WJH09934.1;transl_table=11 CP118128.1 Genbank gene 1481950 1483932 . - . ID=gene-PUW31_07220;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=PUW31_07220 CP118128.1 Protein Homology CDS 1481950 1483932 . - 0 ID=cds-WJH09935.1;Parent=gene-PUW31_07220;Dbxref=NCBI_GP:WJH09935.1;Name=WJH09935.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460662.1;locus_tag=PUW31_07220;product=cyclic di-GMP phosphodiesterase;protein_id=WJH09935.1;transl_table=11 CP118128.1 Genbank gene 1484194 1486128 . - . ID=gene-PUW31_07225;Name=PUW31_07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07225 CP118128.1 Protein Homology CDS 1484194 1486128 . - 0 ID=cds-WJH09936.1;Parent=gene-PUW31_07225;Dbxref=NCBI_GP:WJH09936.1;Name=WJH09936.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460661.1;locus_tag=PUW31_07225;product=exoribonuclease II;protein_id=WJH09936.1;transl_table=11 CP118128.1 Genbank pseudogene 1486373 1487354 . - . ID=gene-PUW31_07230;Name=PUW31_07230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_07230;pseudo=true CP118128.1 Protein Homology CDS 1486373 1487354 . - 0 ID=cds-PUW31_07230;Parent=gene-PUW31_07230;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460660.1;locus_tag=PUW31_07230;product=CMD domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1487554 1488342 . - . ID=gene-PUW31_07235;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=PUW31_07235 CP118128.1 Protein Homology CDS 1487554 1488342 . - 0 ID=cds-WJH09937.1;Parent=gene-PUW31_07235;Dbxref=NCBI_GP:WJH09937.1;Name=WJH09937.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=PUW31_07235;product=enoyl-ACP reductase FabI;protein_id=WJH09937.1;transl_table=11 CP118128.1 Genbank pseudogene 1488460 1488758 . - . ID=gene-PUW31_07240;Name=PUW31_07240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_07240;pseudo=true CP118128.1 Protein Homology CDS 1488460 1488758 . - 0 ID=cds-PUW31_07240;Parent=gene-PUW31_07240;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460658.1;locus_tag=PUW31_07240;product=hypothetical protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1488733 1488912 . - . ID=gene-PUW31_07245;Name=PUW31_07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07245 CP118128.1 Protein Homology CDS 1488733 1488912 . - 0 ID=cds-WJH09938.1;Parent=gene-PUW31_07245;Dbxref=NCBI_GP:WJH09938.1;Name=WJH09938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460657.1;locus_tag=PUW31_07245;product=hypothetical protein;protein_id=WJH09938.1;transl_table=11 CP118128.1 Genbank pseudogene 1488947 1490318 . + . ID=gene-PUW31_07250;Name=steC;gbkey=Gene;gene=steC;gene_biotype=pseudogene;locus_tag=PUW31_07250;pseudo=true CP118128.1 Protein Homology CDS 1488947 1490318 . + 0 ID=cds-PUW31_07250;Parent=gene-PUW31_07250;Note=frameshifted;gbkey=CDS;gene=steC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460656.1;locus_tag=PUW31_07250;product=SPI-2 type III secretion system effector kinase SteC;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1490786 1491493 . + . ID=gene-PUW31_07255;Name=PUW31_07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07255 CP118128.1 Protein Homology CDS 1490786 1491493 . + 0 ID=cds-WJH09939.1;Parent=gene-PUW31_07255;Dbxref=NCBI_GP:WJH09939.1;Name=WJH09939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748430.1;locus_tag=PUW31_07255;product=EAL domain-containing protein;protein_id=WJH09939.1;transl_table=11 CP118128.1 Genbank gene 1491509 1492315 . - . ID=gene-PUW31_07260;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=PUW31_07260 CP118128.1 Protein Homology CDS 1491509 1492315 . - 0 ID=cds-WJH09940.1;Parent=gene-PUW31_07260;Dbxref=NCBI_GP:WJH09940.1;Name=WJH09940.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460654.1;locus_tag=PUW31_07260;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WJH09940.1;transl_table=11 CP118128.1 Genbank gene 1492317 1493309 . - . ID=gene-PUW31_07265;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=PUW31_07265 CP118128.1 Protein Homology CDS 1492317 1493309 . - 0 ID=cds-WJH09941.1;Parent=gene-PUW31_07265;Dbxref=NCBI_GP:WJH09941.1;Name=WJH09941.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460653.1;locus_tag=PUW31_07265;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WJH09941.1;transl_table=11 CP118128.1 Genbank gene 1493309 1494199 . - . ID=gene-PUW31_07270;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=PUW31_07270 CP118128.1 Protein Homology CDS 1493309 1494199 . - 0 ID=cds-WJH09942.1;Parent=gene-PUW31_07270;Dbxref=NCBI_GP:WJH09942.1;Name=WJH09942.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460652.1;locus_tag=PUW31_07270;product=peptide ABC transporter permease SapC;protein_id=WJH09942.1;transl_table=11 CP118128.1 Genbank gene 1494186 1495151 . - . ID=gene-PUW31_07275;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=PUW31_07275 CP118128.1 Protein Homology CDS 1494186 1495151 . - 0 ID=cds-WJH09943.1;Parent=gene-PUW31_07275;Dbxref=NCBI_GP:WJH09943.1;Name=WJH09943.1;gbkey=CDS;gene=sapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=PUW31_07275;product=peptide ABC transporter permease SapB;protein_id=WJH09943.1;transl_table=11 CP118128.1 Genbank gene 1495148 1496797 . - . ID=gene-PUW31_07280;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=PUW31_07280 CP118128.1 Protein Homology CDS 1495148 1496797 . - 0 ID=cds-WJH09944.1;Parent=gene-PUW31_07280;Dbxref=NCBI_GP:WJH09944.1;Name=WJH09944.1;gbkey=CDS;gene=sapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=PUW31_07280;product=peptide ABC transporter substrate-binding protein SapA;protein_id=WJH09944.1;transl_table=11 CP118128.1 Genbank pseudogene 1496909 1497888 . - . ID=gene-PUW31_07285;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=pseudogene;locus_tag=PUW31_07285;pseudo=true CP118128.1 Protein Homology CDS 1496909 1497888 . - 0 ID=cds-PUW31_07285;Parent=gene-PUW31_07285;Note=frameshifted;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460649.1;locus_tag=PUW31_07285;product=phage shock protein operon transcriptional activator;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1498059 1498727 . + . ID=gene-PUW31_07290;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=PUW31_07290 CP118128.1 Protein Homology CDS 1498059 1498727 . + 0 ID=cds-WJH09945.1;Parent=gene-PUW31_07290;Dbxref=NCBI_GP:WJH09945.1;Name=WJH09945.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460648.1;locus_tag=PUW31_07290;product=phage shock protein PspA;protein_id=WJH09945.1;transl_table=11 CP118128.1 Genbank gene 1498787 1499011 . + . ID=gene-PUW31_07295;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=PUW31_07295 CP118128.1 Protein Homology CDS 1498787 1499011 . + 0 ID=cds-WJH09946.1;Parent=gene-PUW31_07295;Dbxref=NCBI_GP:WJH09946.1;Name=WJH09946.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460647.1;locus_tag=PUW31_07295;product=envelope stress response membrane protein PspB;protein_id=WJH09946.1;transl_table=11 CP118128.1 Genbank gene 1499011 1499370 . + . ID=gene-PUW31_07300;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=PUW31_07300 CP118128.1 Protein Homology CDS 1499011 1499370 . + 0 ID=cds-WJH09947.1;Parent=gene-PUW31_07300;Dbxref=NCBI_GP:WJH09947.1;Name=WJH09947.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460646.1;locus_tag=PUW31_07300;product=envelope stress response membrane protein PspC;protein_id=WJH09947.1;transl_table=11 CP118128.1 Genbank gene 1499393 1499611 . + . ID=gene-PUW31_07305;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=PUW31_07305 CP118128.1 Protein Homology CDS 1499393 1499611 . + 0 ID=cds-WJH09948.1;Parent=gene-PUW31_07305;Dbxref=NCBI_GP:WJH09948.1;Name=WJH09948.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460645.1;locus_tag=PUW31_07305;product=phage shock protein PspD;protein_id=WJH09948.1;transl_table=11 CP118128.1 Genbank gene 1499687 1500001 . + . ID=gene-PUW31_07310;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=PUW31_07310 CP118128.1 Protein Homology CDS 1499687 1500001 . + 0 ID=cds-WJH09949.1;Parent=gene-PUW31_07310;Dbxref=NCBI_GP:WJH09949.1;Name=WJH09949.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460644.1;locus_tag=PUW31_07310;product=thiosulfate sulfurtransferase PspE;protein_id=WJH09949.1;transl_table=11 CP118128.1 Genbank pseudogene 1500150 1501546 . + . ID=gene-PUW31_07315;Name=PUW31_07315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_07315;pseudo=true CP118128.1 Protein Homology CDS 1500150 1501546 . + 0 ID=cds-PUW31_07315;Parent=gene-PUW31_07315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=PUW31_07315;product=YcjX family protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1501543 1502604 . + . ID=gene-PUW31_07320;Name=PUW31_07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07320 CP118128.1 Protein Homology CDS 1501543 1502604 . + 0 ID=cds-WJH09950.1;Parent=gene-PUW31_07320;Dbxref=NCBI_GP:WJH09950.1;Name=WJH09950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460642.1;locus_tag=PUW31_07320;product=YcjF family protein;protein_id=WJH09950.1;transl_table=11 CP118128.1 Genbank gene 1502752 1504293 . + . ID=gene-PUW31_07325;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=PUW31_07325 CP118128.1 Protein Homology CDS 1502752 1504293 . + 0 ID=cds-WJH09951.1;Parent=gene-PUW31_07325;Dbxref=NCBI_GP:WJH09951.1;Name=WJH09951.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460641.1;locus_tag=PUW31_07325;product=transcriptional regulator TyrR;protein_id=WJH09951.1;transl_table=11 CP118128.1 Genbank gene 1504383 1504889 . - . ID=gene-PUW31_07330;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=PUW31_07330 CP118128.1 Protein Homology CDS 1504383 1504889 . - 0 ID=cds-WJH09952.1;Parent=gene-PUW31_07330;Dbxref=NCBI_GP:WJH09952.1;Name=WJH09952.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460640.1;locus_tag=PUW31_07330;product=thiol peroxidase;protein_id=WJH09952.1;transl_table=11 CP118128.1 Genbank pseudogene 1505005 1505969 . + . ID=gene-PUW31_07335;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=pseudogene;locus_tag=PUW31_07335;pseudo=true CP118128.1 Protein Homology CDS 1505005 1505969 . + 0 ID=cds-PUW31_07335;Parent=gene-PUW31_07335;Note=frameshifted;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460639.1;locus_tag=PUW31_07335;product=L-Ala-D/L-Glu epimerase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1505944 1506672 . - . ID=gene-PUW31_07340;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=PUW31_07340 CP118128.1 Protein Homology CDS 1505944 1506672 . - 0 ID=cds-WJH09953.1;Parent=gene-PUW31_07340;Dbxref=NCBI_GP:WJH09953.1;Name=WJH09953.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460638.1;locus_tag=PUW31_07340;product=murein tripeptide amidase MpaA;protein_id=WJH09953.1;transl_table=11 CP118128.1 Genbank gene 1506862 1508475 . + . ID=gene-PUW31_07345;Name=PUW31_07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07345 CP118128.1 Protein Homology CDS 1506862 1508475 . + 0 ID=cds-WJH09954.1;Parent=gene-PUW31_07345;Dbxref=NCBI_GP:WJH09954.1;Name=WJH09954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460637.1;locus_tag=PUW31_07345;product=peptide ABC transporter substrate-binding protein;protein_id=WJH09954.1;transl_table=11 CP118128.1 Genbank gene 1508572 1509501 . - . ID=gene-PUW31_07350;Name=PUW31_07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07350 CP118128.1 Protein Homology CDS 1508572 1509501 . - 0 ID=cds-WJH09955.1;Parent=gene-PUW31_07350;Dbxref=NCBI_GP:WJH09955.1;Name=WJH09955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460636.1;locus_tag=PUW31_07350;product=aromatic alcohol reductase;protein_id=WJH09955.1;transl_table=11 CP118128.1 Genbank gene 1509620 1510525 . + . ID=gene-PUW31_07355;Name=PUW31_07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07355 CP118128.1 Protein Homology CDS 1509620 1510525 . + 0 ID=cds-WJH09956.1;Parent=gene-PUW31_07355;Dbxref=NCBI_GP:WJH09956.1;Name=WJH09956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460635.1;locus_tag=PUW31_07355;product=LysR family transcriptional regulator;protein_id=WJH09956.1;transl_table=11 CP118128.1 Genbank pseudogene 1510801 1511669 . + . ID=gene-PUW31_07360;Name=PUW31_07360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_07360;pseudo=true CP118128.1 Protein Homology CDS 1510801 1511669 . + 0 ID=cds-PUW31_07360;Parent=gene-PUW31_07360;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460634.1;locus_tag=PUW31_07360;product=aldo/keto reductase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1511760 1512473 . - . ID=gene-PUW31_07365;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=PUW31_07365 CP118128.1 Protein Homology CDS 1511760 1512473 . - 0 ID=cds-WJH09957.1;Parent=gene-PUW31_07365;Dbxref=NCBI_GP:WJH09957.1;Name=WJH09957.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460633.1;locus_tag=PUW31_07365;product=SDR family oxidoreductase;protein_id=WJH09957.1;transl_table=11 CP118128.1 Genbank gene 1512551 1513141 . + . ID=gene-PUW31_07370;Name=PUW31_07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07370 CP118128.1 Protein Homology CDS 1512551 1513141 . + 0 ID=cds-WJH09958.1;Parent=gene-PUW31_07370;Dbxref=NCBI_GP:WJH09958.1;Name=WJH09958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460632.1;locus_tag=PUW31_07370;product=TetR/AcrR family transcriptional regulator;protein_id=WJH09958.1;transl_table=11 CP118128.1 Genbank gene 1513270 1513506 . + . ID=gene-PUW31_07375;Name=PUW31_07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07375 CP118128.1 Protein Homology CDS 1513270 1513506 . + 0 ID=cds-WJH09959.1;Parent=gene-PUW31_07375;Dbxref=NCBI_GP:WJH09959.1;Name=WJH09959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168019.1;locus_tag=PUW31_07375;product=YgdI/YgdR family lipoprotein;protein_id=WJH09959.1;transl_table=11 CP118128.1 Genbank gene 1513720 1514829 . - . ID=gene-PUW31_07380;Name=PUW31_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07380 CP118128.1 Protein Homology CDS 1513720 1514829 . - 0 ID=cds-WJH10690.1;Parent=gene-PUW31_07380;Dbxref=NCBI_GP:WJH10690.1;Name=WJH10690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448089.1;locus_tag=PUW31_07380;product=hypothetical protein;protein_id=WJH10690.1;transl_table=11 CP118128.1 Genbank gene 1515221 1516078 . - . ID=gene-PUW31_07385;Name=PUW31_07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07385 CP118128.1 Protein Homology CDS 1515221 1516078 . - 0 ID=cds-WJH09960.1;Parent=gene-PUW31_07385;Dbxref=NCBI_GP:WJH09960.1;Name=WJH09960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460629.1;locus_tag=PUW31_07385;product=GyrI-like domain-containing protein;protein_id=WJH09960.1;transl_table=11 CP118128.1 Genbank pseudogene 1516372 1517216 . + . ID=gene-PUW31_07390;Name=zirU;gbkey=Gene;gene=zirU;gene_biotype=pseudogene;locus_tag=PUW31_07390;pseudo=true CP118128.1 Protein Homology CDS 1516372 1517216 . + 0 ID=cds-PUW31_07390;Parent=gene-PUW31_07390;Note=frameshifted;gbkey=CDS;gene=zirU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460628.1;locus_tag=PUW31_07390;product=two-partner-like secretion system exoprotein ZirU;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 1517291 1519266 . + . ID=gene-PUW31_07395;Name=zirT;gbkey=Gene;gene=zirT;gene_biotype=pseudogene;locus_tag=PUW31_07395;pseudo=true CP118128.1 Protein Homology CDS 1517291 1519266 . + 0 ID=cds-PUW31_07395;Parent=gene-PUW31_07395;Note=frameshifted;gbkey=CDS;gene=zirT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460627.1;locus_tag=PUW31_07395;product=two-partner secretion translocator ZirT;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1519287 1520117 . + . ID=gene-PUW31_07400;Name=zirS;gbkey=Gene;gene=zirS;gene_biotype=protein_coding;locus_tag=PUW31_07400 CP118128.1 Protein Homology CDS 1519287 1520117 . + 0 ID=cds-WJH09961.1;Parent=gene-PUW31_07400;Dbxref=NCBI_GP:WJH09961.1;Name=WJH09961.1;gbkey=CDS;gene=zirS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460626.1;locus_tag=PUW31_07400;product=two-partner-like secretion system exoprotein ZirS;protein_id=WJH09961.1;transl_table=11 CP118128.1 Genbank pseudogene 1520216 1520578 . + . ID=gene-PUW31_07405;Name=PUW31_07405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_07405;pseudo=true CP118128.1 Protein Homology CDS 1520216 1520578 . + 0 ID=cds-PUW31_07405;Parent=gene-PUW31_07405;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460625.1;locus_tag=PUW31_07405;product=peroxiredoxin;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1520505 1521215 . - . ID=gene-PUW31_07410;Name=PUW31_07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07410 CP118128.1 Protein Homology CDS 1520505 1521215 . - 0 ID=cds-WJH09962.1;Parent=gene-PUW31_07410;Dbxref=NCBI_GP:WJH09962.1;Name=WJH09962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460624.1;locus_tag=PUW31_07410;product=B3/4 domain-containing protein;protein_id=WJH09962.1;transl_table=11 CP118128.1 Genbank gene 1521259 1521861 . + . ID=gene-PUW31_07415;Name=PUW31_07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07415 CP118128.1 Protein Homology CDS 1521259 1521861 . + 0 ID=cds-WJH09963.1;Parent=gene-PUW31_07415;Dbxref=NCBI_GP:WJH09963.1;Name=WJH09963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460623.1;locus_tag=PUW31_07415;product=helix-turn-helix domain-containing protein;protein_id=WJH09963.1;transl_table=11 CP118128.1 Genbank gene 1521943 1522974 . - . ID=gene-PUW31_07420;Name=PUW31_07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07420 CP118128.1 Protein Homology CDS 1521943 1522974 . - 0 ID=cds-WJH09964.1;Parent=gene-PUW31_07420;Dbxref=NCBI_GP:WJH09964.1;Name=WJH09964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460622.1;locus_tag=PUW31_07420;product=mechanosensitive ion channel family protein;protein_id=WJH09964.1;transl_table=11 CP118128.1 Genbank gene 1523213 1523467 . + . ID=gene-PUW31_07425;Name=PUW31_07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07425 CP118128.1 Protein Homology CDS 1523213 1523467 . + 0 ID=cds-WJH09965.1;Parent=gene-PUW31_07425;Dbxref=NCBI_GP:WJH09965.1;Name=WJH09965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460621.1;locus_tag=PUW31_07425;product=DUF2534 family protein;protein_id=WJH09965.1;transl_table=11 CP118128.1 Genbank gene 1523522 1524469 . - . ID=gene-PUW31_07430;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=PUW31_07430 CP118128.1 Protein Homology CDS 1523522 1524469 . - 0 ID=cds-WJH09966.1;Parent=gene-PUW31_07430;Dbxref=NCBI_GP:WJH09966.1;Name=WJH09966.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460620.1;locus_tag=PUW31_07430;product=universal stress protein UspE;protein_id=WJH09966.1;transl_table=11 CP118128.1 Genbank gene 1524620 1525372 . - . ID=gene-PUW31_07435;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=PUW31_07435 CP118128.1 Protein Homology CDS 1524620 1525372 . - 0 ID=cds-WJH09967.1;Parent=gene-PUW31_07435;Dbxref=NCBI_GP:WJH09967.1;Name=WJH09967.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=PUW31_07435;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WJH09967.1;transl_table=11 CP118128.1 Genbank gene 1525568 1526083 . - . ID=gene-PUW31_07440;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=PUW31_07440 CP118128.1 Protein Homology CDS 1525568 1526083 . - 0 ID=cds-WJH09968.1;Parent=gene-PUW31_07440;Dbxref=NCBI_GP:WJH09968.1;Name=WJH09968.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460618.1;locus_tag=PUW31_07440;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WJH09968.1;transl_table=11 CP118128.1 Genbank gene 1526341 1526904 . + . ID=gene-PUW31_07445;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=PUW31_07445 CP118128.1 Protein Homology CDS 1526341 1526904 . + 0 ID=cds-WJH09969.1;Parent=gene-PUW31_07445;Dbxref=NCBI_GP:WJH09969.1;Name=WJH09969.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460617.1;locus_tag=PUW31_07445;product=DNA endonuclease SmrA;protein_id=WJH09969.1;transl_table=11 CP118128.1 Genbank gene 1527315 1528469 . + . ID=gene-PUW31_07450;Name=PUW31_07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07450 CP118128.1 Protein Homology CDS 1527315 1528469 . + 0 ID=cds-WJH09970.1;Parent=gene-PUW31_07450;Dbxref=NCBI_GP:WJH09970.1;Name=WJH09970.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460616.1;locus_tag=PUW31_07450;product=methyl-accepting chemotaxis protein;protein_id=WJH09970.1;transl_table=11 CP118128.1 Genbank gene 1528624 1529598 . + . ID=gene-PUW31_07455;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=PUW31_07455 CP118128.1 Protein Homology CDS 1528624 1529598 . + 0 ID=cds-WJH10691.1;Parent=gene-PUW31_07455;Dbxref=NCBI_GP:WJH10691.1;Name=WJH10691.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460615.1;locus_tag=PUW31_07455;product=zinc transporter ZntB;protein_id=WJH10691.1;transl_table=11 CP118128.1 Genbank gene 1529873 1530055 . + . ID=gene-PUW31_07460;Name=PUW31_07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07460 CP118128.1 Protein Homology CDS 1529873 1530055 . + 0 ID=cds-WJH09971.1;Parent=gene-PUW31_07460;Dbxref=NCBI_GP:WJH09971.1;Name=WJH09971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518775.1;locus_tag=PUW31_07460;product=hypothetical protein;protein_id=WJH09971.1;transl_table=11 CP118128.1 Genbank gene 1530084 1531457 . + . ID=gene-PUW31_07465;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=PUW31_07465 CP118128.1 Protein Homology CDS 1530084 1531457 . + 0 ID=cds-WJH09972.1;Parent=gene-PUW31_07465;Dbxref=NCBI_GP:WJH09972.1;Name=WJH09972.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460614.1;locus_tag=PUW31_07465;product=ATP-dependent RNA helicase DbpA;protein_id=WJH09972.1;transl_table=11 CP118128.1 Genbank gene 1531501 1532436 . - . ID=gene-PUW31_07470;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=PUW31_07470 CP118128.1 Protein Homology CDS 1531501 1532436 . - 0 ID=cds-WJH09973.1;Parent=gene-PUW31_07470;Dbxref=NCBI_GP:WJH09973.1;Name=WJH09973.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460613.1;locus_tag=PUW31_07470;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WJH09973.1;transl_table=11 CP118128.1 Genbank pseudogene 1532488 1532691 . - . ID=gene-PUW31_07475;Name=PUW31_07475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_07475;pseudo=true CP118128.1 Protein Homology CDS 1532488 1532691 . - 0 ID=cds-PUW31_07475;Parent=gene-PUW31_07475;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309956.1;locus_tag=PUW31_07475;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1532792 1533130 . + . ID=gene-PUW31_07480;Name=PUW31_07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07480 CP118128.1 Protein Homology CDS 1532792 1533130 . + 0 ID=cds-WJH09974.1;Parent=gene-PUW31_07480;Dbxref=NCBI_GP:WJH09974.1;Name=WJH09974.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460612.1;locus_tag=PUW31_07480;product=SMR family transporter;protein_id=WJH09974.1;transl_table=11 CP118128.1 Genbank gene 1533180 1533614 . - . ID=gene-PUW31_07485;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=PUW31_07485 CP118128.1 Protein Homology CDS 1533180 1533614 . - 0 ID=cds-WJH09975.1;Parent=gene-PUW31_07485;Dbxref=NCBI_GP:WJH09975.1;Name=WJH09975.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460611.1;locus_tag=PUW31_07485;product=universal stress protein UspF;protein_id=WJH09975.1;transl_table=11 CP118128.1 Genbank pseudogene 1534095 1537620 . - . ID=gene-PUW31_07490;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=pseudogene;locus_tag=PUW31_07490;pseudo=true CP118128.1 Protein Homology CDS 1534095 1537620 . - 0 ID=cds-PUW31_07490;Parent=gene-PUW31_07490;Note=frameshifted;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460610.1;locus_tag=PUW31_07490;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1537681 1537980 . - . ID=gene-PUW31_07495;Name=PUW31_07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07495 CP118128.1 Protein Homology CDS 1537681 1537980 . - 0 ID=cds-WJH09976.1;Parent=gene-PUW31_07495;Dbxref=NCBI_GP:WJH09976.1;Name=WJH09976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460609.1;locus_tag=PUW31_07495;product=reverse transcriptase;protein_id=WJH09976.1;transl_table=11 CP118128.1 Genbank gene 1537896 1538162 . + . ID=gene-PUW31_07500;Name=PUW31_07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07500 CP118128.1 Protein Homology CDS 1537896 1538162 . + 0 ID=cds-WJH09977.1;Parent=gene-PUW31_07500;Dbxref=NCBI_GP:WJH09977.1;Name=WJH09977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=PUW31_07500;product=DUF333 domain-containing protein;protein_id=WJH09977.1;transl_table=11 CP118128.1 Genbank gene 1538206 1538616 . - . ID=gene-PUW31_07505;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=PUW31_07505 CP118128.1 Protein Homology CDS 1538206 1538616 . - 0 ID=cds-WJH09978.1;Parent=gene-PUW31_07505;Dbxref=NCBI_GP:WJH09978.1;Name=WJH09978.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460607.1;locus_tag=PUW31_07505;product=heat shock protein HslJ;protein_id=WJH09978.1;transl_table=11 CP118128.1 Genbank gene 1538727 1539716 . - . ID=gene-PUW31_07510;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=PUW31_07510 CP118128.1 Protein Homology CDS 1538727 1539716 . - 0 ID=cds-WJH09979.1;Parent=gene-PUW31_07510;Dbxref=NCBI_GP:WJH09979.1;Name=WJH09979.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460606.1;locus_tag=PUW31_07510;product=D-lactate dehydrogenase;protein_id=WJH09979.1;transl_table=11 CP118128.1 Genbank gene 1539956 1542592 . + . ID=gene-PUW31_07515;Name=PUW31_07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07515 CP118128.1 Protein Homology CDS 1539956 1542592 . + 0 ID=cds-WJH09980.1;Parent=gene-PUW31_07515;Dbxref=NCBI_GP:WJH09980.1;Name=WJH09980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460605.1;locus_tag=PUW31_07515;product=YdbH family protein;protein_id=WJH09980.1;transl_table=11 CP118128.1 Genbank gene 1542592 1542783 . + . ID=gene-PUW31_07520;Name=PUW31_07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07520 CP118128.1 Protein Homology CDS 1542592 1542783 . + 0 ID=cds-WJH09981.1;Parent=gene-PUW31_07520;Dbxref=NCBI_GP:WJH09981.1;Name=WJH09981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460604.1;locus_tag=PUW31_07520;product=YnbE family lipoprotein;protein_id=WJH09981.1;transl_table=11 CP118128.1 Genbank gene 1542791 1543114 . + . ID=gene-PUW31_07525;Name=PUW31_07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07525 CP118128.1 Protein Homology CDS 1542791 1543114 . + 0 ID=cds-WJH09982.1;Parent=gene-PUW31_07525;Dbxref=NCBI_GP:WJH09982.1;Name=WJH09982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460603.1;locus_tag=PUW31_07525;product=YdbL family protein;protein_id=WJH09982.1;transl_table=11 CP118128.1 Genbank gene 1543257 1543706 . + . ID=gene-PUW31_07530;Name=PUW31_07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07530 CP118128.1 Protein Homology CDS 1543257 1543706 . + 0 ID=cds-WJH09983.1;Parent=gene-PUW31_07530;Dbxref=NCBI_GP:WJH09983.1;Name=WJH09983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460602.1;locus_tag=PUW31_07530;product=GFA family protein;protein_id=WJH09983.1;transl_table=11 CP118128.1 Genbank gene 1543703 1544308 . - . ID=gene-PUW31_07535;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=PUW31_07535 CP118128.1 Protein Homology CDS 1543703 1544308 . - 0 ID=cds-WJH09984.1;Parent=gene-PUW31_07535;Dbxref=NCBI_GP:WJH09984.1;Name=WJH09984.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460601.1;locus_tag=PUW31_07535;product=FMN-dependent NADH-azoreductase;protein_id=WJH09984.1;transl_table=11 CP118128.1 Genbank pseudogene 1544509 1548409 . + . ID=gene-PUW31_07540;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=pseudogene;locus_tag=PUW31_07540;pseudo=true CP118128.1 Protein Homology CDS 1544509 1548409 . + 0 ID=cds-PUW31_07540;Parent=gene-PUW31_07540;Note=frameshifted;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=PUW31_07540;product=ATP-dependent RNA helicase HrpA;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1548473 1549273 . + . ID=gene-PUW31_07545;Name=PUW31_07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07545 CP118128.1 Protein Homology CDS 1548473 1549273 . + 0 ID=cds-WJH09985.1;Parent=gene-PUW31_07545;Dbxref=NCBI_GP:WJH09985.1;Name=WJH09985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460599.1;locus_tag=PUW31_07545;product=YdcF family protein;protein_id=WJH09985.1;transl_table=11 CP118128.1 Genbank gene 1549390 1549920 . + . ID=gene-PUW31_07550;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=PUW31_07550 CP118128.1 Protein Homology CDS 1549390 1549920 . + 0 ID=cds-WJH09986.1;Parent=gene-PUW31_07550;Dbxref=NCBI_GP:WJH09986.1;Name=WJH09986.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460598.1;locus_tag=PUW31_07550;product=cytochrome b561;protein_id=WJH09986.1;transl_table=11 CP118128.1 Genbank gene 1550191 1550853 . - . ID=gene-PUW31_07555;Name=PUW31_07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07555 CP118128.1 Protein Homology CDS 1550191 1550853 . - 0 ID=cds-WJH09987.1;Parent=gene-PUW31_07555;Dbxref=NCBI_GP:WJH09987.1;Name=WJH09987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576082.1;locus_tag=PUW31_07555;product=class I SAM-dependent methyltransferase;protein_id=WJH09987.1;transl_table=11 CP118128.1 Genbank gene 1551317 1552867 . - . ID=gene-PUW31_07560;Name=PUW31_07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07560 CP118128.1 Protein Homology CDS 1551317 1552867 . - 0 ID=cds-WJH09988.1;Parent=gene-PUW31_07560;Dbxref=NCBI_GP:WJH09988.1;Name=WJH09988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460596.1;locus_tag=PUW31_07560;product=glycosyltransferase family 39 protein;protein_id=WJH09988.1;transl_table=11 CP118128.1 Genbank gene 1553004 1553684 . - . ID=gene-PUW31_07565;Name=PUW31_07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07565 CP118128.1 Protein Homology CDS 1553004 1553684 . - 0 ID=cds-WJH09989.1;Parent=gene-PUW31_07565;Dbxref=NCBI_GP:WJH09989.1;Name=WJH09989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460595.1;locus_tag=PUW31_07565;product=amino acid ABC transporter permease;protein_id=WJH09989.1;transl_table=11 CP118128.1 Genbank gene 1553697 1554413 . - . ID=gene-PUW31_07570;Name=PUW31_07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07570 CP118128.1 Protein Homology CDS 1553697 1554413 . - 0 ID=cds-WJH09990.1;Parent=gene-PUW31_07570;Dbxref=NCBI_GP:WJH09990.1;Name=WJH09990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001196339.1;locus_tag=PUW31_07570;product=amino acid ABC transporter ATP-binding protein;protein_id=WJH09990.1;transl_table=11 CP118128.1 Genbank gene 1554438 1555085 . - . ID=gene-PUW31_07575;Name=PUW31_07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07575 CP118128.1 Protein Homology CDS 1554438 1555085 . - 0 ID=cds-WJH09991.1;Parent=gene-PUW31_07575;Dbxref=NCBI_GP:WJH09991.1;Name=WJH09991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460593.1;locus_tag=PUW31_07575;product=amino acid ABC transporter permease;protein_id=WJH09991.1;transl_table=11 CP118128.1 Genbank gene 1555092 1555853 . - . ID=gene-PUW31_07580;Name=PUW31_07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07580 CP118128.1 Protein Homology CDS 1555092 1555853 . - 0 ID=cds-WJH09992.1;Parent=gene-PUW31_07580;Dbxref=NCBI_GP:WJH09992.1;Name=WJH09992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460592.1;locus_tag=PUW31_07580;product=transporter substrate-binding domain-containing protein;protein_id=WJH09992.1;transl_table=11 CP118128.1 Genbank gene 1556761 1557105 . + . ID=gene-PUW31_07585;Name=PUW31_07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07585 CP118128.1 Protein Homology CDS 1556761 1557105 . + 0 ID=cds-WJH09993.1;Parent=gene-PUW31_07585;Dbxref=NCBI_GP:WJH09993.1;Name=WJH09993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460591.1;locus_tag=PUW31_07585;product=DUF1294 domain-containing protein;protein_id=WJH09993.1;transl_table=11 CP118128.1 Genbank gene 1557226 1558452 . - . ID=gene-PUW31_07590;Name=sseJ;gbkey=Gene;gene=sseJ;gene_biotype=protein_coding;locus_tag=PUW31_07590 CP118128.1 Protein Homology CDS 1557226 1558452 . - 0 ID=cds-WJH09994.1;Parent=gene-PUW31_07590;Dbxref=NCBI_GP:WJH09994.1;Name=WJH09994.1;gbkey=CDS;gene=sseJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460590.1;locus_tag=PUW31_07590;product=SPI-2 type III secretion system effector SseJ;protein_id=WJH09994.1;transl_table=11 CP118128.1 Genbank gene 1558878 1559594 . + . ID=gene-PUW31_07595;Name=PUW31_07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07595 CP118128.1 Protein Homology CDS 1558878 1559594 . + 0 ID=cds-WJH09995.1;Parent=gene-PUW31_07595;Dbxref=NCBI_GP:WJH09995.1;Name=WJH09995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460589.1;locus_tag=PUW31_07595;product=hypothetical protein;protein_id=WJH09995.1;transl_table=11 CP118128.1 Genbank gene 1559723 1560124 . - . ID=gene-PUW31_07600;Name=steB;gbkey=Gene;gene=steB;gene_biotype=protein_coding;locus_tag=PUW31_07600 CP118128.1 Protein Homology CDS 1559723 1560124 . - 0 ID=cds-WJH09996.1;Parent=gene-PUW31_07600;Dbxref=NCBI_GP:WJH09996.1;Name=WJH09996.1;gbkey=CDS;gene=steB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448047.1;locus_tag=PUW31_07600;product=type III secretion system effector SteB;protein_id=WJH09996.1;transl_table=11 CP118128.1 Genbank gene 1560647 1560922 . + . ID=gene-PUW31_07605;Name=PUW31_07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07605 CP118128.1 Protein Homology CDS 1560647 1560922 . + 0 ID=cds-WJH09997.1;Parent=gene-PUW31_07605;Dbxref=NCBI_GP:WJH09997.1;Name=WJH09997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460587.1;locus_tag=PUW31_07605;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WJH09997.1;transl_table=11 CP118128.1 Genbank gene 1560954 1562072 . + . ID=gene-PUW31_07610;Name=PUW31_07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07610 CP118128.1 Protein Homology CDS 1560954 1562072 . + 0 ID=cds-WJH09998.1;Parent=gene-PUW31_07610;Dbxref=NCBI_GP:WJH09998.1;Name=WJH09998.1;Ontology_term=GO:0006113,GO:0009404,GO:0004024,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase activity%2C zinc-dependent|0004024||IEA,S-(hydroxymethyl)glutathione dehydrogenase activity|0051903||IEA;go_process=fermentation|0006113||IEA,toxin metabolic process|0009404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=PUW31_07610;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WJH09998.1;transl_table=11 CP118128.1 Genbank gene 1562241 1563866 . + . ID=gene-PUW31_07615;Name=PUW31_07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07615 CP118128.1 Protein Homology CDS 1562241 1563866 . + 0 ID=cds-WJH09999.1;Parent=gene-PUW31_07615;Dbxref=NCBI_GP:WJH09999.1;Name=WJH09999.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460585.2;locus_tag=PUW31_07615;product=methyl-accepting chemotaxis protein;protein_id=WJH09999.1;transl_table=11 CP118128.1 Genbank gene 1563927 1564850 . - . ID=gene-PUW31_07620;Name=PUW31_07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07620 CP118128.1 Protein Homology CDS 1563927 1564850 . - 0 ID=cds-WJH10000.1;Parent=gene-PUW31_07620;Dbxref=NCBI_GP:WJH10000.1;Name=WJH10000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460584.1;locus_tag=PUW31_07620;product=LysR substrate-binding domain-containing protein;protein_id=WJH10000.1;transl_table=11 CP118128.1 Genbank gene 1565143 1566486 . + . ID=gene-PUW31_07625;Name=PUW31_07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07625 CP118128.1 Protein Homology CDS 1565143 1566486 . + 0 ID=cds-WJH10001.1;Parent=gene-PUW31_07625;Dbxref=NCBI_GP:WJH10001.1;Name=WJH10001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460583.1;locus_tag=PUW31_07625;product=VOC family protein;protein_id=WJH10001.1;transl_table=11 CP118128.1 Genbank gene 1566535 1568043 . + . ID=gene-PUW31_07630;Name=PUW31_07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07630 CP118128.1 Protein Homology CDS 1566535 1568043 . + 0 ID=cds-WJH10002.1;Parent=gene-PUW31_07630;Dbxref=NCBI_GP:WJH10002.1;Name=WJH10002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460582.1;locus_tag=PUW31_07630;product=carboxylesterase/lipase family protein;protein_id=WJH10002.1;transl_table=11 CP118128.1 Genbank gene 1568262 1569917 . + . ID=gene-PUW31_07635;Name=PUW31_07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07635 CP118128.1 Protein Homology CDS 1568262 1569917 . + 0 ID=cds-WJH10003.1;Parent=gene-PUW31_07635;Dbxref=NCBI_GP:WJH10003.1;Name=WJH10003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460581.1;locus_tag=PUW31_07635;product=glucan biosynthesis protein;protein_id=WJH10003.1;transl_table=11 CP118128.1 Genbank gene 1570113 1570688 . + . ID=gene-PUW31_07640;Name=PUW31_07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07640 CP118128.1 Protein Homology CDS 1570113 1570688 . + 0 ID=cds-WJH10004.1;Parent=gene-PUW31_07640;Dbxref=NCBI_GP:WJH10004.1;Name=WJH10004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460580.1;locus_tag=PUW31_07640;product=YceI family protein;protein_id=WJH10004.1;transl_table=11 CP118128.1 Genbank gene 1570866 1571585 . - . ID=gene-PUW31_07645;Name=PUW31_07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07645 CP118128.1 Protein Homology CDS 1570866 1571585 . - 0 ID=cds-WJH10005.1;Parent=gene-PUW31_07645;Dbxref=NCBI_GP:WJH10005.1;Name=WJH10005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023780.1;locus_tag=PUW31_07645;product=FadR/GntR family transcriptional regulator;protein_id=WJH10005.1;transl_table=11 CP118128.1 Genbank gene 1571674 1572765 . - . ID=gene-PUW31_07650;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=PUW31_07650 CP118128.1 Protein Homology CDS 1571674 1572765 . - 0 ID=cds-WJH10692.1;Parent=gene-PUW31_07650;Dbxref=NCBI_GP:WJH10692.1;Name=WJH10692.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131634.1;locus_tag=PUW31_07650;product=L-idonate 5-dehydrogenase;protein_id=WJH10692.1;transl_table=11 CP118128.1 Genbank gene 1572734 1574095 . - . ID=gene-PUW31_07655;Name=PUW31_07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07655 CP118128.1 Protein Homology CDS 1572734 1574095 . - 0 ID=cds-WJH10693.1;Parent=gene-PUW31_07655;Dbxref=NCBI_GP:WJH10693.1;Name=WJH10693.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000648132.1;locus_tag=PUW31_07655;product=MFS transporter;protein_id=WJH10693.1;transl_table=11 CP118128.1 Genbank gene 1574179 1574946 . - . ID=gene-PUW31_07660;Name=PUW31_07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07660 CP118128.1 Protein Homology CDS 1574179 1574946 . - 0 ID=cds-WJH10006.1;Parent=gene-PUW31_07660;Dbxref=NCBI_GP:WJH10006.1;Name=WJH10006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894239.1;locus_tag=PUW31_07660;product=SDR family oxidoreductase;protein_id=WJH10006.1;transl_table=11 CP118128.1 Genbank gene 1575284 1576537 . + . ID=gene-PUW31_07665;Name=PUW31_07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07665 CP118128.1 Protein Homology CDS 1575284 1576537 . + 0 ID=cds-WJH10007.1;Parent=gene-PUW31_07665;Dbxref=NCBI_GP:WJH10007.1;Name=WJH10007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000067287.1;locus_tag=PUW31_07665;product=enolase C-terminal domain-like protein;protein_id=WJH10007.1;transl_table=11 CP118128.1 Genbank gene 1576678 1577115 . - . ID=gene-PUW31_07670;Name=aac(6');gbkey=Gene;gene=aac(6');gene_biotype=protein_coding;locus_tag=PUW31_07670 CP118128.1 Protein Homology CDS 1576678 1577115 . - 0 ID=cds-WJH10008.1;Parent=gene-PUW31_07670;Dbxref=NCBI_GP:WJH10008.1;Name=WJH10008.1;gbkey=CDS;gene=aac(6');inference=COORDINATES: similar to AA sequence:RefSeq:NP_460578.1;locus_tag=PUW31_07670;product=cryptic aminoglycoside N-acetyltransferase AAC(6')-Iy/Iaa;protein_id=WJH10008.1;transl_table=11 CP118128.1 Genbank gene 1577115 1577906 . - . ID=gene-PUW31_07675;Name=PUW31_07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07675 CP118128.1 Protein Homology CDS 1577115 1577906 . - 0 ID=cds-WJH10009.1;Parent=gene-PUW31_07675;Dbxref=NCBI_GP:WJH10009.1;Name=WJH10009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460577.1;locus_tag=PUW31_07675;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WJH10009.1;transl_table=11 CP118128.1 Genbank gene 1577922 1578554 . - . ID=gene-PUW31_07680;Name=PUW31_07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07680 CP118128.1 Protein Homology CDS 1577922 1578554 . - 0 ID=cds-WJH10010.1;Parent=gene-PUW31_07680;Dbxref=NCBI_GP:WJH10010.1;Name=WJH10010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460576.1;locus_tag=PUW31_07680;product=ribulose-phosphate 3 epimerase family protein;protein_id=WJH10010.1;transl_table=11 CP118128.1 Genbank gene 1578566 1579003 . - . ID=gene-PUW31_07685;Name=sgcA;gbkey=Gene;gene=sgcA;gene_biotype=protein_coding;locus_tag=PUW31_07685 CP118128.1 Protein Homology CDS 1578566 1579003 . - 0 ID=cds-WJH10011.1;Parent=gene-PUW31_07685;Dbxref=NCBI_GP:WJH10011.1;Name=WJH10011.1;gbkey=CDS;gene=sgcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460575.1;locus_tag=PUW31_07685;product=SgcA family PTS sugar transporter subunit IIA;protein_id=WJH10011.1;transl_table=11 CP118128.1 Genbank gene 1579135 1579941 . - . ID=gene-PUW31_07690;Name=sgcQ;gbkey=Gene;gene=sgcQ;gene_biotype=protein_coding;locus_tag=PUW31_07690 CP118128.1 Protein Homology CDS 1579135 1579941 . - 0 ID=cds-WJH10012.1;Parent=gene-PUW31_07690;Dbxref=NCBI_GP:WJH10012.1;Name=WJH10012.1;gbkey=CDS;gene=sgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460574.1;locus_tag=PUW31_07690;product=BtpA family protein SgcQ;protein_id=WJH10012.1;transl_table=11 CP118128.1 Genbank gene 1579955 1581268 . - . ID=gene-PUW31_07695;Name=sgcC;gbkey=Gene;gene=sgcC;gene_biotype=protein_coding;locus_tag=PUW31_07695 CP118128.1 Protein Homology CDS 1579955 1581268 . - 0 ID=cds-WJH10013.1;Parent=gene-PUW31_07695;Dbxref=NCBI_GP:WJH10013.1;Name=WJH10013.1;gbkey=CDS;gene=sgcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460573.1;locus_tag=PUW31_07695;product=PTS sugar transporter subunit IIC SgcC;protein_id=WJH10013.1;transl_table=11 CP118128.1 Genbank gene 1581279 1581560 . - . ID=gene-PUW31_07700;Name=sgcB;gbkey=Gene;gene=sgcB;gene_biotype=protein_coding;locus_tag=PUW31_07700 CP118128.1 Protein Homology CDS 1581279 1581560 . - 0 ID=cds-WJH10014.1;Parent=gene-PUW31_07700;Dbxref=NCBI_GP:WJH10014.1;Name=WJH10014.1;gbkey=CDS;gene=sgcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460572.1;locus_tag=PUW31_07700;product=PTS sugar transporter subunit IIB SgcB;protein_id=WJH10014.1;transl_table=11 CP118128.1 Genbank gene 1581557 1582675 . - . ID=gene-PUW31_07705;Name=PUW31_07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07705 CP118128.1 Protein Homology CDS 1581557 1582675 . - 0 ID=cds-WJH10015.1;Parent=gene-PUW31_07705;Dbxref=NCBI_GP:WJH10015.1;Name=WJH10015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460571.1;locus_tag=PUW31_07705;product=M42 family metallopeptidase;protein_id=WJH10015.1;transl_table=11 CP118128.1 Genbank gene 1582892 1583431 . + . ID=gene-PUW31_07710;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=PUW31_07710 CP118128.1 Protein Homology CDS 1582892 1583431 . + 0 ID=cds-WJH10016.1;Parent=gene-PUW31_07710;Dbxref=NCBI_GP:WJH10016.1;Name=WJH10016.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460570.1;locus_tag=PUW31_07710;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WJH10016.1;transl_table=11 CP118128.1 Genbank gene 1583428 1584408 . - . ID=gene-PUW31_07715;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=PUW31_07715 CP118128.1 Protein Homology CDS 1583428 1584408 . - 0 ID=cds-WJH10017.1;Parent=gene-PUW31_07715;Dbxref=NCBI_GP:WJH10017.1;Name=WJH10017.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460569.1;locus_tag=PUW31_07715;product=YdcK family protein;protein_id=WJH10017.1;transl_table=11 CP118128.1 Genbank gene 1584515 1585528 . + . ID=gene-PUW31_07720;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=PUW31_07720 CP118128.1 Protein Homology CDS 1584515 1585528 . + 0 ID=cds-WJH10018.1;Parent=gene-PUW31_07720;Dbxref=NCBI_GP:WJH10018.1;Name=WJH10018.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460568.1;locus_tag=PUW31_07720;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WJH10018.1;transl_table=11 CP118128.1 Genbank gene 1585515 1586111 . + . ID=gene-PUW31_07725;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=PUW31_07725 CP118128.1 Protein Homology CDS 1585515 1586111 . + 0 ID=cds-WJH10019.1;Parent=gene-PUW31_07725;Dbxref=NCBI_GP:WJH10019.1;Name=WJH10019.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460567.1;locus_tag=PUW31_07725;product=tellurite resistance methyltransferase TehB;protein_id=WJH10019.1;transl_table=11 CP118128.1 Genbank gene 1586267 1586935 . + . ID=gene-PUW31_07730;Name=PUW31_07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07730 CP118128.1 Protein Homology CDS 1586267 1586935 . + 0 ID=cds-WJH10020.1;Parent=gene-PUW31_07730;Dbxref=NCBI_GP:WJH10020.1;Name=WJH10020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460566.1;locus_tag=PUW31_07730;product=DUF3313 domain-containing protein;protein_id=WJH10020.1;transl_table=11 CP118128.1 Genbank gene 1586989 1588167 . - . ID=gene-PUW31_07735;Name=PUW31_07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07735 CP118128.1 Protein Homology CDS 1586989 1588167 . - 0 ID=cds-WJH10021.1;Parent=gene-PUW31_07735;Dbxref=NCBI_GP:WJH10021.1;Name=WJH10021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460565.1;locus_tag=PUW31_07735;product=benzoate/H(+) symporter BenE family transporter;protein_id=WJH10021.1;transl_table=11 CP118128.1 Genbank gene 1588259 1588795 . + . ID=gene-PUW31_07740;Name=PUW31_07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07740 CP118128.1 Protein Homology CDS 1588259 1588795 . + 0 ID=cds-WJH10022.1;Parent=gene-PUW31_07740;Dbxref=NCBI_GP:WJH10022.1;Name=WJH10022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000369539.1;locus_tag=PUW31_07740;product=XRE family transcriptional regulator;protein_id=WJH10022.1;transl_table=11 CP118128.1 Genbank gene 1588874 1590838 . + . ID=gene-PUW31_07745;Name=PUW31_07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07745 CP118128.1 Protein Homology CDS 1588874 1590838 . + 0 ID=cds-WJH10023.1;Parent=gene-PUW31_07745;Dbxref=NCBI_GP:WJH10023.1;Name=WJH10023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460563.1;locus_tag=PUW31_07745;product=U32 family peptidase;protein_id=WJH10023.1;transl_table=11 CP118128.1 Genbank gene 1590839 1591069 . - . ID=gene-PUW31_07750;Name=PUW31_07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07750 CP118128.1 Protein Homology CDS 1590839 1591069 . - 0 ID=cds-WJH10694.1;Parent=gene-PUW31_07750;Dbxref=NCBI_GP:WJH10694.1;Name=WJH10694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460562.1;locus_tag=PUW31_07750;product=DUF2554 family protein;protein_id=WJH10694.1;transl_table=11 CP118128.1 Genbank pseudogene 1591343 1592292 . - . ID=gene-PUW31_07755;Name=sifB;gbkey=Gene;gene=sifB;gene_biotype=pseudogene;locus_tag=PUW31_07755;pseudo=true CP118128.1 Protein Homology CDS 1591343 1592292 . - 0 ID=cds-PUW31_07755;Parent=gene-PUW31_07755;Note=frameshifted;gbkey=CDS;gene=sifB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460561.1;locus_tag=PUW31_07755;product=SPI-2 type III secretion system effector SifB;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1592829 1593227 . + . ID=gene-PUW31_07760;Name=PUW31_07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07760 CP118128.1 Protein Homology CDS 1592829 1593227 . + 0 ID=cds-WJH10024.1;Parent=gene-PUW31_07760;Dbxref=NCBI_GP:WJH10024.1;Name=WJH10024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460560.1;locus_tag=PUW31_07760;product=D-alanyl-D-alanine dipeptidase;protein_id=WJH10024.1;transl_table=11 CP118128.1 Genbank gene 1593260 1593490 . + . ID=gene-PUW31_07765;Name=PUW31_07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07765 CP118128.1 Protein Homology CDS 1593260 1593490 . + 0 ID=cds-WJH10025.1;Parent=gene-PUW31_07765;Dbxref=NCBI_GP:WJH10025.1;Name=WJH10025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448018.1;locus_tag=PUW31_07765;product=hypothetical protein;protein_id=WJH10025.1;transl_table=11 CP118128.1 Genbank gene 1593749 1594519 . + . ID=gene-PUW31_07770;Name=PUW31_07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07770 CP118128.1 Protein Homology CDS 1593749 1594519 . + 0 ID=cds-WJH10026.1;Parent=gene-PUW31_07770;Dbxref=NCBI_GP:WJH10026.1;Name=WJH10026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460558.1;locus_tag=PUW31_07770;product=M15 family metallopeptidase;protein_id=WJH10026.1;transl_table=11 CP118128.1 Genbank gene 1594655 1596079 . + . ID=gene-PUW31_07775;Name=ycdR;gbkey=Gene;gene=ycdR;gene_biotype=protein_coding;locus_tag=PUW31_07775 CP118128.1 Protein Homology CDS 1594655 1596079 . + 0 ID=cds-WJH10027.1;Parent=gene-PUW31_07775;Dbxref=NCBI_GP:WJH10027.1;Name=WJH10027.1;gbkey=CDS;gene=ycdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460557.1;locus_tag=PUW31_07775;product=GntR family transcriptional regulator YdcR;protein_id=WJH10027.1;transl_table=11 CP118128.1 Genbank pseudogene 1596215 1597638 . + . ID=gene-PUW31_07780;Name=patD;gbkey=Gene;gene=patD;gene_biotype=pseudogene;locus_tag=PUW31_07780;pseudo=true CP118128.1 Protein Homology CDS 1596215 1597638 . + 0 ID=cds-PUW31_07780;Parent=gene-PUW31_07780;Note=frameshifted;Ontology_term=GO:0009447,GO:0019145;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase activity|0019145||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310075.1;locus_tag=PUW31_07780;product=aminobutyraldehyde dehydrogenase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1597743 1597838 . - . ID=gene-PUW31_07785;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=PUW31_07785 CP118128.1 Protein Homology CDS 1597743 1597838 . - 0 ID=cds-WJH10028.1;Parent=gene-PUW31_07785;Dbxref=NCBI_GP:WJH10028.1;Name=WJH10028.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103198.1;locus_tag=PUW31_07785;product=stress response membrane protein YncL;protein_id=WJH10028.1;transl_table=11 CP118128.1 Genbank gene 1598037 1598210 . + . ID=gene-PUW31_07790;Name=PUW31_07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07790 CP118128.1 Protein Homology CDS 1598037 1598210 . + 0 ID=cds-WJH10695.1;Parent=gene-PUW31_07790;Dbxref=NCBI_GP:WJH10695.1;Name=WJH10695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=PUW31_07790;product=GhoT/OrtT family toxin;protein_id=WJH10695.1;transl_table=11 CP118128.1 Genbank gene 1598255 1600399 . - . ID=gene-PUW31_07795;Name=srfC;gbkey=Gene;gene=srfC;gene_biotype=protein_coding;locus_tag=PUW31_07795 CP118128.1 Protein Homology CDS 1598255 1600399 . - 0 ID=cds-WJH10029.1;Parent=gene-PUW31_07795;Dbxref=NCBI_GP:WJH10029.1;Name=WJH10029.1;gbkey=CDS;gene=srfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460554.1;locus_tag=PUW31_07795;product=virulence-associated effector SrfC;protein_id=WJH10029.1;transl_table=11 CP118128.1 Genbank pseudogene 1600396 1602192 . - . ID=gene-PUW31_07800;Name=PUW31_07800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_07800;pseudo=true CP118128.1 Protein Homology CDS 1600396 1602192 . - 0 ID=cds-PUW31_07800;Parent=gene-PUW31_07800;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=PUW31_07800;product=virulence factor SrfB;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 1602194 1603072 . + . ID=gene-PUW31_07805;Name=PUW31_07805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_07805;pseudo=true CP118128.1 Protein Homology CDS 1602194 1603072 . + 0 ID=cds-PUW31_07805;Parent=gene-PUW31_07805;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=PUW31_07805;product=virulence factor SrfB;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 1603065 1603418 . - . ID=gene-PUW31_07810;Name=PUW31_07810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_07810;pseudo=true CP118128.1 Protein Homology CDS 1603065 1603418 . - 0 ID=cds-PUW31_07810;Parent=gene-PUW31_07810;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=PUW31_07810;product=virulence factor SrfB;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1603423 1604748 . - . ID=gene-PUW31_07815;Name=srfA;gbkey=Gene;gene=srfA;gene_biotype=protein_coding;locus_tag=PUW31_07815 CP118128.1 Protein Homology CDS 1603423 1604748 . - 0 ID=cds-WJH10030.1;Parent=gene-PUW31_07815;Dbxref=NCBI_GP:WJH10030.1;Name=WJH10030.1;gbkey=CDS;gene=srfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460552.1;locus_tag=PUW31_07815;product=virulence-associated effector SrfA;protein_id=WJH10030.1;transl_table=11 CP118128.1 Genbank gene 1604972 1605205 . + . ID=gene-PUW31_07820;Name=PUW31_07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07820 CP118128.1 Protein Homology CDS 1604972 1605205 . + 0 ID=cds-WJH10031.1;Parent=gene-PUW31_07820;Dbxref=NCBI_GP:WJH10031.1;Name=WJH10031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460551.1;locus_tag=PUW31_07820;product=YdcY family protein;protein_id=WJH10031.1;transl_table=11 CP118128.1 Genbank gene 1605210 1605659 . - . ID=gene-PUW31_07825;Name=PUW31_07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07825 CP118128.1 Protein Homology CDS 1605210 1605659 . - 0 ID=cds-WJH10032.1;Parent=gene-PUW31_07825;Dbxref=NCBI_GP:WJH10032.1;Name=WJH10032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460550.1;locus_tag=PUW31_07825;product=DMT family transporter;protein_id=WJH10032.1;transl_table=11 CP118128.1 Genbank gene 1605659 1606174 . - . ID=gene-PUW31_07830;Name=mddA;gbkey=Gene;gene=mddA;gene_biotype=protein_coding;locus_tag=PUW31_07830 CP118128.1 Protein Homology CDS 1605659 1606174 . - 0 ID=cds-WJH10033.1;Parent=gene-PUW31_07830;Dbxref=NCBI_GP:WJH10033.1;Name=WJH10033.1;gbkey=CDS;gene=mddA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460549.1;locus_tag=PUW31_07830;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;protein_id=WJH10033.1;transl_table=11 CP118128.1 Genbank pseudogene 1606386 1607422 . + . ID=gene-PUW31_07835;Name=PUW31_07835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_07835;pseudo=true CP118128.1 Protein Homology CDS 1606386 1607422 . + 0 ID=cds-PUW31_07835;Parent=gene-PUW31_07835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517827.1;locus_tag=PUW31_07835;product=NADP-dependent oxidoreductase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1607756 1608421 . + . ID=gene-PUW31_07840;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;locus_tag=PUW31_07840 CP118128.1 Protein Homology CDS 1607756 1608421 . + 0 ID=cds-WJH10034.1;Parent=gene-PUW31_07840;Dbxref=NCBI_GP:WJH10034.1;Name=WJH10034.1;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460547.1;locus_tag=PUW31_07840;product=colanic acid/biofilm transcriptional regulator McbR;protein_id=WJH10034.1;transl_table=11 CP118128.1 Genbank pseudogene 1608477 1610596 . - . ID=gene-PUW31_07845;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=pseudogene;locus_tag=PUW31_07845;pseudo=true CP118128.1 Protein Homology CDS 1608477 1610596 . - 0 ID=cds-PUW31_07845;Parent=gene-PUW31_07845;Note=frameshifted;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460546.1;locus_tag=PUW31_07845;product=TonB-dependent receptor PqqU;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 1610860 1611925 . + . ID=gene-PUW31_07850;Name=PUW31_07850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_07850;pseudo=true CP118128.1 Protein Homology CDS 1610860 1611925 . + 0 ID=cds-PUW31_07850;Parent=gene-PUW31_07850;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460545.1;locus_tag=PUW31_07850;product=YncE family protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 1611879 1612031 . + . ID=gene-PUW31_07855;Name=PUW31_07855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_07855;pseudo=true CP118128.1 Protein Homology CDS 1611879 1612031 . + 0 ID=cds-PUW31_07855;Parent=gene-PUW31_07855;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460544.1;locus_tag=PUW31_07855;product=YgdI/YgdR family lipoprotein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1612108 1613601 . - . ID=gene-PUW31_07860;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=PUW31_07860 CP118128.1 Protein Homology CDS 1612108 1613601 . - 0 ID=cds-WJH10035.1;Parent=gene-PUW31_07860;Dbxref=NCBI_GP:WJH10035.1;Name=WJH10035.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460543.1;locus_tag=PUW31_07860;product=L-asparagine permease;protein_id=WJH10035.1;transl_table=11 CP118128.1 Genbank gene 1614114 1614746 . + . ID=gene-PUW31_07865;Name=steA;gbkey=Gene;gene=steA;gene_biotype=protein_coding;locus_tag=PUW31_07865 CP118128.1 Protein Homology CDS 1614114 1614746 . + 0 ID=cds-WJH10036.1;Parent=gene-PUW31_07865;Dbxref=NCBI_GP:WJH10036.1;Name=WJH10036.1;gbkey=CDS;gene=steA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460542.1;locus_tag=PUW31_07865;product=type III secretion system effector SteA;protein_id=WJH10036.1;transl_table=11 CP118128.1 Genbank gene 1615030 1615875 . + . ID=gene-PUW31_07870;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=PUW31_07870 CP118128.1 Protein Homology CDS 1615030 1615875 . + 0 ID=cds-WJH10037.1;Parent=gene-PUW31_07870;Dbxref=NCBI_GP:WJH10037.1;Name=WJH10037.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460541.1;locus_tag=PUW31_07870;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WJH10037.1;transl_table=11 CP118128.1 Genbank gene 1615911 1616804 . - . ID=gene-PUW31_07875;Name=PUW31_07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07875 CP118128.1 Protein Homology CDS 1615911 1616804 . - 0 ID=cds-WJH10038.1;Parent=gene-PUW31_07875;Dbxref=NCBI_GP:WJH10038.1;Name=WJH10038.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460540.1;locus_tag=PUW31_07875;product=PhzF family isomerase;protein_id=WJH10038.1;transl_table=11 CP118128.1 Genbank gene 1616910 1617590 . - . ID=gene-PUW31_07880;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=PUW31_07880 CP118128.1 Protein Homology CDS 1616910 1617590 . - 0 ID=cds-WJH10039.1;Parent=gene-PUW31_07880;Dbxref=NCBI_GP:WJH10039.1;Name=WJH10039.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460539.1;locus_tag=PUW31_07880;product=respiratory nitrate reductase subunit gamma;protein_id=WJH10039.1;transl_table=11 CP118128.1 Genbank gene 1617587 1618282 . - . ID=gene-PUW31_07885;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=PUW31_07885 CP118128.1 Protein Homology CDS 1617587 1618282 . - 0 ID=cds-WJH10040.1;Parent=gene-PUW31_07885;Dbxref=NCBI_GP:WJH10040.1;Name=WJH10040.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460538.1;locus_tag=PUW31_07885;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WJH10040.1;transl_table=11 CP118128.1 Genbank gene 1618282 1619826 . - . ID=gene-PUW31_07890;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=PUW31_07890 CP118128.1 Protein Homology CDS 1618282 1619826 . - 0 ID=cds-WJH10041.1;Parent=gene-PUW31_07890;Dbxref=NCBI_GP:WJH10041.1;Name=WJH10041.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460537.1;locus_tag=PUW31_07890;product=nitrate reductase subunit beta;protein_id=WJH10041.1;transl_table=11 CP118128.1 Genbank pseudogene 1619823 1623562 . - . ID=gene-PUW31_07895;Name=PUW31_07895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_07895;pseudo=true CP118128.1 Protein Homology CDS 1619823 1623562 . - 0 ID=cds-PUW31_07895;Parent=gene-PUW31_07895;Note=frameshifted;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460536.1;locus_tag=PUW31_07895;product=nitrate reductase subunit alpha;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1623654 1625042 . - . ID=gene-PUW31_07900;Name=PUW31_07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07900 CP118128.1 Protein Homology CDS 1623654 1625042 . - 0 ID=cds-WJH10042.1;Parent=gene-PUW31_07900;Dbxref=NCBI_GP:WJH10042.1;Name=WJH10042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460535.1;locus_tag=PUW31_07900;product=NarK family nitrate/nitrite MFS transporter;protein_id=WJH10042.1;transl_table=11 CP118128.1 Genbank gene 1625257 1625835 . - . ID=gene-PUW31_07905;Name=PUW31_07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07905 CP118128.1 Protein Homology CDS 1625257 1625835 . - 0 ID=cds-WJH10043.1;Parent=gene-PUW31_07905;Dbxref=NCBI_GP:WJH10043.1;Name=WJH10043.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460534.1;locus_tag=PUW31_07905;product=TetR family transcriptional regulator;protein_id=WJH10043.1;transl_table=11 CP118128.1 Genbank gene 1625953 1627440 . + . ID=gene-PUW31_07910;Name=smvA;gbkey=Gene;gene=smvA;gene_biotype=protein_coding;locus_tag=PUW31_07910 CP118128.1 Protein Homology CDS 1625953 1627440 . + 0 ID=cds-WJH10044.1;Parent=gene-PUW31_07910;Dbxref=NCBI_GP:WJH10044.1;Name=WJH10044.1;gbkey=CDS;gene=smvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460533.1;locus_tag=PUW31_07910;product=methyl viologen efflux MFS transporter SmvA;protein_id=WJH10044.1;transl_table=11 CP118128.1 Genbank gene 1627465 1627845 . - . ID=gene-PUW31_07915;Name=PUW31_07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07915 CP118128.1 Protein Homology CDS 1627465 1627845 . - 0 ID=cds-WJH10696.1;Parent=gene-PUW31_07915;Dbxref=NCBI_GP:WJH10696.1;Name=WJH10696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460532.3;locus_tag=PUW31_07915;product=GFA family protein;protein_id=WJH10696.1;transl_table=11 CP118128.1 Genbank gene 1627989 1629077 . - . ID=gene-PUW31_07920;Name=ompD;gbkey=Gene;gene=ompD;gene_biotype=protein_coding;locus_tag=PUW31_07920 CP118128.1 Protein Homology CDS 1627989 1629077 . - 0 ID=cds-WJH10045.1;Parent=gene-PUW31_07920;Dbxref=NCBI_GP:WJH10045.1;Name=WJH10045.1;gbkey=CDS;gene=ompD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460531.1;locus_tag=PUW31_07920;product=porin OmpD;protein_id=WJH10045.1;transl_table=11 CP118128.1 Genbank gene 1629601 1630482 . - . ID=gene-PUW31_07925;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=PUW31_07925 CP118128.1 Protein Homology CDS 1629601 1630482 . - 0 ID=cds-WJH10046.1;Parent=gene-PUW31_07925;Dbxref=NCBI_GP:WJH10046.1;Name=WJH10046.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203799.1;locus_tag=PUW31_07925;product=aromatic amino acid efflux DMT transporter YddG;protein_id=WJH10046.1;transl_table=11 CP118128.1 Genbank gene 1630760 1633807 . + . ID=gene-PUW31_07930;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=PUW31_07930 CP118128.1 Protein Homology CDS 1630760 1633807 . + 0 ID=cds-WJH10047.1;Parent=gene-PUW31_07930;Dbxref=NCBI_GP:WJH10047.1;Name=WJH10047.1;Ontology_term=GO:0015942,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=PUW31_07930;product=formate dehydrogenase-N subunit alpha;protein_id=WJH10047.1;transl_except=(pos:1631345..1631347%2Caa:Sec);transl_table=11 CP118128.1 Genbank gene 1633821 1634705 . + . ID=gene-PUW31_07935;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=PUW31_07935 CP118128.1 Protein Homology CDS 1633821 1634705 . + 0 ID=cds-WJH10048.1;Parent=gene-PUW31_07935;Dbxref=NCBI_GP:WJH10048.1;Name=WJH10048.1;Ontology_term=GO:0045333,GO:0008863;gbkey=CDS;gene=fdxH;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=cellular respiration|0045333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460528.1;locus_tag=PUW31_07935;product=formate dehydrogenase subunit beta;protein_id=WJH10048.1;transl_table=11 CP118128.1 Genbank gene 1634698 1635354 . + . ID=gene-PUW31_07940;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=PUW31_07940 CP118128.1 Protein Homology CDS 1634698 1635354 . + 0 ID=cds-WJH10049.1;Parent=gene-PUW31_07940;Dbxref=NCBI_GP:WJH10049.1;Name=WJH10049.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460527.1;locus_tag=PUW31_07940;product=formate dehydrogenase-N subunit gamma;protein_id=WJH10049.1;transl_table=11 CP118128.1 Genbank gene 1635445 1636446 . - . ID=gene-PUW31_07945;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=PUW31_07945 CP118128.1 Protein Homology CDS 1635445 1636446 . - 0 ID=cds-WJH10050.1;Parent=gene-PUW31_07945;Dbxref=NCBI_GP:WJH10050.1;Name=WJH10050.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460526.1;locus_tag=PUW31_07945;product=alcohol dehydrogenase AdhP;protein_id=WJH10050.1;transl_table=11 CP118128.1 Genbank gene 1636728 1638425 . - . ID=gene-PUW31_07950;Name=PUW31_07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07950 CP118128.1 Protein Homology CDS 1636728 1638425 . - 0 ID=cds-WJH10051.1;Parent=gene-PUW31_07950;Dbxref=NCBI_GP:WJH10051.1;Name=WJH10051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460525.1;locus_tag=PUW31_07950;product=NAD-dependent malic enzyme;protein_id=WJH10051.1;transl_table=11 CP118128.1 Genbank gene 1638602 1638745 . - . ID=gene-PUW31_07955;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=PUW31_07955 CP118128.1 Protein Homology CDS 1638602 1638745 . - 0 ID=cds-WJH10052.1;Parent=gene-PUW31_07955;Dbxref=NCBI_GP:WJH10052.1;Name=WJH10052.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460524.1;locus_tag=PUW31_07955;product=stationary-phase-induced ribosome-associated protein;protein_id=WJH10052.1;transl_table=11 CP118128.1 Genbank gene 1638840 1639055 . - . ID=gene-PUW31_07960;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=PUW31_07960 CP118128.1 Protein Homology CDS 1638840 1639055 . - 0 ID=cds-WJH10053.1;Parent=gene-PUW31_07960;Dbxref=NCBI_GP:WJH10053.1;Name=WJH10053.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460523.1;locus_tag=PUW31_07960;product=biofilm-dependent modulation protein;protein_id=WJH10053.1;transl_table=11 CP118128.1 Genbank gene 1639568 1639999 . + . ID=gene-PUW31_07965;Name=PUW31_07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07965 CP118128.1 Protein Homology CDS 1639568 1639999 . + 0 ID=cds-WJH10054.1;Parent=gene-PUW31_07965;Dbxref=NCBI_GP:WJH10054.1;Name=WJH10054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460522.1;locus_tag=PUW31_07965;product=OsmC family protein;protein_id=WJH10054.1;transl_table=11 CP118128.1 Genbank gene 1640349 1640678 . + . ID=gene-PUW31_07970;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=PUW31_07970 CP118128.1 Protein Homology CDS 1640349 1640678 . + 0 ID=cds-WJH10055.1;Parent=gene-PUW31_07970;Dbxref=NCBI_GP:WJH10055.1;Name=WJH10055.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460521.1;locus_tag=PUW31_07970;product=acid-activated periplasmic chaperone HdeB;protein_id=WJH10055.1;transl_table=11 CP118128.1 Genbank gene 1640821 1641606 . + . ID=gene-PUW31_07975;Name=PUW31_07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07975 CP118128.1 Protein Homology CDS 1640821 1641606 . + 0 ID=cds-WJH10056.1;Parent=gene-PUW31_07975;Dbxref=NCBI_GP:WJH10056.1;Name=WJH10056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460520.1;locus_tag=PUW31_07975;product=OBAP family protein;protein_id=WJH10056.1;transl_table=11 CP118128.1 Genbank gene 1641830 1643518 . + . ID=gene-PUW31_07980;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=PUW31_07980 CP118128.1 Protein Homology CDS 1641830 1643518 . + 0 ID=cds-WJH10057.1;Parent=gene-PUW31_07980;Dbxref=NCBI_GP:WJH10057.1;Name=WJH10057.1;Ontology_term=GO:0005992,GO:0016798;gbkey=CDS;gene=treZ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000944943.1;locus_tag=PUW31_07980;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WJH10057.1;transl_table=11 CP118128.1 Genbank pseudogene 1643515 1646044 . + . ID=gene-PUW31_07985;Name=treY;gbkey=Gene;gene=treY;gene_biotype=pseudogene;locus_tag=PUW31_07985;pseudo=true CP118128.1 Protein Homology CDS 1643515 1646044 . + 0 ID=cds-PUW31_07985;Parent=gene-PUW31_07985;Note=frameshifted;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460518.1;locus_tag=PUW31_07985;product=malto-oligosyltrehalose synthase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1646101 1648176 . + . ID=gene-PUW31_07990;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=PUW31_07990 CP118128.1 Protein Homology CDS 1646101 1648176 . + 0 ID=cds-WJH10058.1;Parent=gene-PUW31_07990;Dbxref=NCBI_GP:WJH10058.1;Name=WJH10058.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460517.1;locus_tag=PUW31_07990;product=glycogen debranching protein GlgX;protein_id=WJH10058.1;transl_table=11 CP118128.1 Genbank gene 1648289 1649491 . - . ID=gene-PUW31_07995;Name=PUW31_07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_07995 CP118128.1 Protein Homology CDS 1648289 1649491 . - 0 ID=cds-WJH10059.1;Parent=gene-PUW31_07995;Dbxref=NCBI_GP:WJH10059.1;Name=WJH10059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460516.1;locus_tag=PUW31_07995;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WJH10059.1;transl_table=11 CP118128.1 Genbank pseudogene 1649504 1649794 . - . ID=gene-PUW31_08000;Name=PUW31_08000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_08000;pseudo=true CP118128.1 Protein Homology CDS 1649504 1649794 . - 0 ID=cds-PUW31_08000;Parent=gene-PUW31_08000;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460515.1;locus_tag=PUW31_08000;product=Na+/H+ antiporter NhaC family protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 1649794 1650372 . - . ID=gene-PUW31_08005;Name=PUW31_08005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_08005;pseudo=true CP118128.1 Protein Homology CDS 1649794 1650372 . - 0 ID=cds-PUW31_08005;Parent=gene-PUW31_08005;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460514.1;locus_tag=PUW31_08005;product=LacI family DNA-binding transcriptional regulator;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1650603 1650884 . + . ID=gene-PUW31_08010;Name=PUW31_08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08010 CP118128.1 Protein Homology CDS 1650603 1650884 . + 0 ID=cds-WJH10060.1;Parent=gene-PUW31_08010;Dbxref=NCBI_GP:WJH10060.1;Name=WJH10060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000742002.1;locus_tag=PUW31_08010;product=hypothetical protein;protein_id=WJH10060.1;transl_table=11 CP118128.1 Genbank pseudogene 1651173 1651340 . - . ID=gene-PUW31_08015;Name=PUW31_08015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_08015;pseudo=true CP118128.1 Protein Homology CDS 1651173 1651340 . - 0 ID=cds-PUW31_08015;Parent=gene-PUW31_08015;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253166.1;locus_tag=PUW31_08015;product=DUF1493 family protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 1651340 1651756 . + . ID=gene-PUW31_08020;Name=PUW31_08020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_08020;pseudo=true CP118128.1 Protein Homology CDS 1651340 1651756 . + 0 ID=cds-PUW31_08020;Parent=gene-PUW31_08020;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460504.1;locus_tag=PUW31_08020;product=PhoPQ-activated protein PqaA family protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 1651753 1652343 . + . ID=gene-PUW31_08025;Name=PUW31_08025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_08025;pseudo=true CP118128.1 Protein Homology CDS 1651753 1652343 . + 0 ID=cds-PUW31_08025;Parent=gene-PUW31_08025;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460503.1;locus_tag=PUW31_08025;product=MFS transporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1652318 1653343 . + . ID=gene-PUW31_08030;Name=PUW31_08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08030 CP118128.1 Protein Homology CDS 1652318 1653343 . + 0 ID=cds-WJH10061.1;Parent=gene-PUW31_08030;Dbxref=NCBI_GP:WJH10061.1;Name=WJH10061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460502.1;locus_tag=PUW31_08030;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WJH10061.1;transl_table=11 CP118128.1 Genbank gene 1653402 1654193 . - . ID=gene-PUW31_08035;Name=PUW31_08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08035 CP118128.1 Protein Homology CDS 1653402 1654193 . - 0 ID=cds-WJH10062.1;Parent=gene-PUW31_08035;Dbxref=NCBI_GP:WJH10062.1;Name=WJH10062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460501.1;locus_tag=PUW31_08035;product=FadR/GntR family transcriptional regulator;protein_id=WJH10062.1;transl_table=11 CP118128.1 Genbank gene 1654239 1655330 . - . ID=gene-PUW31_08040;Name=PUW31_08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08040 CP118128.1 Protein Homology CDS 1654239 1655330 . - 0 ID=cds-WJH10063.1;Parent=gene-PUW31_08040;Dbxref=NCBI_GP:WJH10063.1;Name=WJH10063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460500.1;locus_tag=PUW31_08040;product=linear amide C-N hydrolase;protein_id=WJH10063.1;transl_table=11 CP118128.1 Genbank gene 1655758 1656861 . + . ID=gene-PUW31_08045;Name=PUW31_08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08045 CP118128.1 Protein Homology CDS 1655758 1656861 . + 0 ID=cds-WJH10064.1;Parent=gene-PUW31_08045;Dbxref=NCBI_GP:WJH10064.1;Name=WJH10064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460499.1;locus_tag=PUW31_08045;product=hydrogenase small subunit;protein_id=WJH10064.1;transl_table=11 CP118128.1 Genbank gene 1656864 1658666 . + . ID=gene-PUW31_08050;Name=PUW31_08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08050 CP118128.1 Protein Homology CDS 1656864 1658666 . + 0 ID=cds-WJH10065.1;Parent=gene-PUW31_08050;Dbxref=NCBI_GP:WJH10065.1;Name=WJH10065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460498.1;locus_tag=PUW31_08050;product=nickel-dependent hydrogenase large subunit;protein_id=WJH10065.1;transl_table=11 CP118128.1 Genbank gene 1658617 1659360 . + . ID=gene-PUW31_08055;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=PUW31_08055 CP118128.1 Protein Homology CDS 1658617 1659360 . + 0 ID=cds-WJH10066.1;Parent=gene-PUW31_08055;Dbxref=NCBI_GP:WJH10066.1;Name=WJH10066.1;Ontology_term=GO:0022904,GO:0005506,GO:0009055,GO:0016020;gbkey=CDS;gene=cybH;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460497.1;locus_tag=PUW31_08055;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=WJH10066.1;transl_table=11 CP118128.1 Genbank gene 1659366 1659974 . + . ID=gene-PUW31_08060;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=PUW31_08060 CP118128.1 Protein Homology CDS 1659366 1659974 . + 0 ID=cds-WJH10067.1;Parent=gene-PUW31_08060;Dbxref=NCBI_GP:WJH10067.1;Name=WJH10067.1;Ontology_term=GO:0051604,GO:0004190,GO:0009375;gbkey=CDS;gene=hybD;go_component=ferredoxin hydrogenase complex|0009375||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460496.1;locus_tag=PUW31_08060;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WJH10067.1;transl_table=11 CP118128.1 Genbank gene 1659974 1660273 . + . ID=gene-PUW31_08065;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=PUW31_08065 CP118128.1 Protein Homology CDS 1659974 1660273 . + 0 ID=cds-WJH10068.1;Parent=gene-PUW31_08065;Dbxref=NCBI_GP:WJH10068.1;Name=WJH10068.1;Ontology_term=GO:0065003,GO:0016530,GO:0051082;gbkey=CDS;gene=hypC;go_function=metallochaperone activity|0016530||IEA,unfolded protein binding|0051082||IEA;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460495.1;locus_tag=PUW31_08065;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WJH10068.1;transl_table=11 CP118128.1 Genbank gene 1660270 1660680 . + . ID=gene-PUW31_08070;Name=PUW31_08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08070 CP118128.1 Protein Homology CDS 1660270 1660680 . + 0 ID=cds-WJH10069.1;Parent=gene-PUW31_08070;Dbxref=NCBI_GP:WJH10069.1;Name=WJH10069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460494.1;locus_tag=PUW31_08070;product=hydrogenase;protein_id=WJH10069.1;transl_table=11 CP118128.1 Genbank gene 1660698 1661759 . + . ID=gene-PUW31_08075;Name=PUW31_08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08075 CP118128.1 Protein Homology CDS 1660698 1661759 . + 0 ID=cds-WJH10070.1;Parent=gene-PUW31_08075;Dbxref=NCBI_GP:WJH10070.1;Name=WJH10070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460493.1;locus_tag=PUW31_08075;product=hydrogenase expression/formation C-terminal domain-containing protein;protein_id=WJH10070.1;transl_table=11 CP118128.1 Genbank gene 1661747 1662634 . + . ID=gene-PUW31_08080;Name=PUW31_08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08080 CP118128.1 Protein Homology CDS 1661747 1662634 . + 0 ID=cds-WJH10071.1;Parent=gene-PUW31_08080;Dbxref=NCBI_GP:WJH10071.1;Name=WJH10071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460492.1;locus_tag=PUW31_08080;product=ATP/GTP-binding protein;protein_id=WJH10071.1;transl_table=11 CP118128.1 Genbank gene 1662647 1662988 . + . ID=gene-PUW31_08085;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=PUW31_08085 CP118128.1 Protein Homology CDS 1662647 1662988 . + 0 ID=cds-WJH10072.1;Parent=gene-PUW31_08085;Dbxref=NCBI_GP:WJH10072.1;Name=WJH10072.1;Ontology_term=GO:0036211,GO:0008901;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460491.1;locus_tag=PUW31_08085;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WJH10072.1;transl_table=11 CP118128.1 Genbank gene 1663129 1664247 . - . ID=gene-PUW31_08090;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=PUW31_08090 CP118128.1 Protein Homology CDS 1663129 1664247 . - 0 ID=cds-WJH10073.1;Parent=gene-PUW31_08090;Dbxref=NCBI_GP:WJH10073.1;Name=WJH10073.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460490.1;locus_tag=PUW31_08090;product=porin OmpC;protein_id=WJH10073.1;transl_table=11 CP118128.1 Genbank gene 1664964 1665506 . + . ID=gene-PUW31_08095;Name=PUW31_08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08095 CP118128.1 Protein Homology CDS 1664964 1665506 . + 0 ID=cds-WJH10074.1;Parent=gene-PUW31_08095;Dbxref=NCBI_GP:WJH10074.1;Name=WJH10074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460488.1;locus_tag=PUW31_08095;product=nuclear transport factor 2 family protein;protein_id=WJH10074.1;transl_table=11 CP118128.1 Genbank pseudogene 1665562 1666477 . - . ID=gene-PUW31_08100;Name=PUW31_08100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_08100;pseudo=true CP118128.1 Protein Homology CDS 1665562 1666477 . - 0 ID=cds-PUW31_08100;Parent=gene-PUW31_08100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=PUW31_08100;product=bestrophin family protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1666732 1667091 . - . ID=gene-PUW31_08105;Name=PUW31_08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08105 CP118128.1 Protein Homology CDS 1666732 1667091 . - 0 ID=cds-WJH10075.1;Parent=gene-PUW31_08105;Dbxref=NCBI_GP:WJH10075.1;Name=WJH10075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460486.1;locus_tag=PUW31_08105;product=DUF4186 domain-containing protein;protein_id=WJH10075.1;transl_table=11 CP118128.1 Genbank gene 1667091 1668017 . - . ID=gene-PUW31_08110;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=PUW31_08110 CP118128.1 Protein Homology CDS 1667091 1668017 . - 0 ID=cds-WJH10076.1;Parent=gene-PUW31_08110;Dbxref=NCBI_GP:WJH10076.1;Name=WJH10076.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460485.1;locus_tag=PUW31_08110;product=glutaminase B;protein_id=WJH10076.1;transl_table=11 CP118128.1 Genbank gene 1668090 1669478 . - . ID=gene-PUW31_08115;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=PUW31_08115 CP118128.1 Protein Homology CDS 1668090 1669478 . - 0 ID=cds-WJH10077.1;Parent=gene-PUW31_08115;Dbxref=NCBI_GP:WJH10077.1;Name=WJH10077.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460484.1;locus_tag=PUW31_08115;product=succinate-semialdehyde dehydrogenase;protein_id=WJH10077.1;transl_table=11 CP118128.1 Genbank gene 1669581 1670453 . + . ID=gene-PUW31_08120;Name=PUW31_08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08120 CP118128.1 Protein Homology CDS 1669581 1670453 . + 0 ID=cds-WJH10078.1;Parent=gene-PUW31_08120;Dbxref=NCBI_GP:WJH10078.1;Name=WJH10078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460483.1;locus_tag=PUW31_08120;product=LysR substrate-binding domain-containing protein;protein_id=WJH10078.1;transl_table=11 CP118128.1 Genbank gene 1670569 1671759 . + . ID=gene-PUW31_08125;Name=PUW31_08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08125 CP118128.1 Protein Homology CDS 1670569 1671759 . + 0 ID=cds-WJH10079.1;Parent=gene-PUW31_08125;Dbxref=NCBI_GP:WJH10079.1;Name=WJH10079.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460482.1;locus_tag=PUW31_08125;product=sugar transporter;protein_id=WJH10079.1;transl_table=11 CP118128.1 Genbank gene 1671806 1672471 . - . ID=gene-PUW31_08130;Name=PUW31_08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08130 CP118128.1 Protein Homology CDS 1671806 1672471 . - 0 ID=cds-WJH10080.1;Parent=gene-PUW31_08130;Dbxref=NCBI_GP:WJH10080.1;Name=WJH10080.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460481.1;locus_tag=PUW31_08130;product=MarC family NAAT transporter;protein_id=WJH10080.1;transl_table=11 CP118128.1 Genbank gene 1672730 1673164 . + . ID=gene-PUW31_08135;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=PUW31_08135 CP118128.1 Protein Homology CDS 1672730 1673164 . + 0 ID=cds-WJH10081.1;Parent=gene-PUW31_08135;Dbxref=NCBI_GP:WJH10081.1;Name=WJH10081.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460480.1;locus_tag=PUW31_08135;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WJH10081.1;transl_table=11 CP118128.1 Genbank gene 1673184 1673567 . + . ID=gene-PUW31_08140;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=PUW31_08140 CP118128.1 Protein Homology CDS 1673184 1673567 . + 0 ID=cds-WJH10082.1;Parent=gene-PUW31_08140;Dbxref=NCBI_GP:WJH10082.1;Name=WJH10082.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091194.1;locus_tag=PUW31_08140;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WJH10082.1;transl_table=11 CP118128.1 Genbank gene 1673596 1673811 . + . ID=gene-PUW31_08145;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=PUW31_08145 CP118128.1 Protein Homology CDS 1673596 1673811 . + 0 ID=cds-WJH10083.1;Parent=gene-PUW31_08145;Dbxref=NCBI_GP:WJH10083.1;Name=WJH10083.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460478.1;locus_tag=PUW31_08145;product=multiple antibiotic resistance protein MarB;protein_id=WJH10083.1;transl_table=11 CP118128.1 Genbank gene 1673930 1674832 . - . ID=gene-PUW31_08150;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=PUW31_08150 CP118128.1 Protein Homology CDS 1673930 1674832 . - 0 ID=cds-WJH10084.1;Parent=gene-PUW31_08150;Dbxref=NCBI_GP:WJH10084.1;Name=WJH10084.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460477.1;locus_tag=PUW31_08150;product=O-acetylserine/cysteine exporter;protein_id=WJH10084.1;transl_table=11 CP118128.1 Genbank gene 1675060 1676250 . + . ID=gene-PUW31_08155;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=PUW31_08155 CP118128.1 Protein Homology CDS 1675060 1676250 . + 0 ID=cds-WJH10085.1;Parent=gene-PUW31_08155;Dbxref=NCBI_GP:WJH10085.1;Name=WJH10085.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460476.1;locus_tag=PUW31_08155;product=efflux MFS transporter YdeE;protein_id=WJH10085.1;transl_table=11 CP118128.1 Genbank gene 1676496 1676591 . + . ID=gene-PUW31_08160;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=PUW31_08160 CP118128.1 Protein Homology CDS 1676496 1676591 . + 0 ID=cds-WJH10086.1;Parent=gene-PUW31_08160;Dbxref=NCBI_GP:WJH10086.1;Name=WJH10086.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=PUW31_08160;product=protein MgtS;protein_id=WJH10086.1;transl_table=11 CP118128.1 Genbank gene 1676939 1677331 . - . ID=gene-PUW31_08165;Name=PUW31_08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08165 CP118128.1 Protein Homology CDS 1676939 1677331 . - 0 ID=cds-WJH10087.1;Parent=gene-PUW31_08165;Dbxref=NCBI_GP:WJH10087.1;Name=WJH10087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460475.1;locus_tag=PUW31_08165;product=YdeI family stress tolerance OB fold protein;protein_id=WJH10087.1;transl_table=11 CP118128.1 Genbank gene 1677759 1678286 . + . ID=gene-PUW31_08170;Name=PUW31_08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08170 CP118128.1 Protein Homology CDS 1677759 1678286 . + 0 ID=cds-WJH10088.1;Parent=gene-PUW31_08170;Dbxref=NCBI_GP:WJH10088.1;Name=WJH10088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460474.1;locus_tag=PUW31_08170;product=2-oxo-tetronate isomerase;protein_id=WJH10088.1;transl_table=11 CP118128.1 Genbank gene 1678406 1678588 . - . ID=gene-PUW31_08175;Name=PUW31_08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08175 CP118128.1 Protein Homology CDS 1678406 1678588 . - 0 ID=cds-WJH10089.1;Parent=gene-PUW31_08175;Dbxref=NCBI_GP:WJH10089.1;Name=WJH10089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460473.1;locus_tag=PUW31_08175;product=general stress protein;protein_id=WJH10089.1;transl_table=11 CP118128.1 Genbank pseudogene 1678932 1680973 . - . ID=gene-PUW31_08180;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=pseudogene;locus_tag=PUW31_08180;pseudo=true CP118128.1 Protein Homology CDS 1678932 1680973 . - 0 ID=cds-PUW31_08180;Parent=gene-PUW31_08180;Note=frameshifted;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460472.1;locus_tag=PUW31_08180;product=peptidyl-dipeptidase Dcp;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1681112 1681858 . + . ID=gene-PUW31_08185;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=PUW31_08185 CP118128.1 Protein Homology CDS 1681112 1681858 . + 0 ID=cds-WJH10090.1;Parent=gene-PUW31_08185;Dbxref=NCBI_GP:WJH10090.1;Name=WJH10090.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460471.1;locus_tag=PUW31_08185;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WJH10090.1;transl_table=11 CP118128.1 Genbank gene 1681988 1682674 . + . ID=gene-PUW31_08190;Name=PUW31_08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08190 CP118128.1 Protein Homology CDS 1681988 1682674 . + 0 ID=cds-WJH10091.1;Parent=gene-PUW31_08190;Dbxref=NCBI_GP:WJH10091.1;Name=WJH10091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460470.1;locus_tag=PUW31_08190;product=GntR family transcriptional regulator;protein_id=WJH10091.1;transl_table=11 CP118128.1 Genbank gene 1682856 1683059 . + . ID=gene-PUW31_08195;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=PUW31_08195 CP118128.1 Protein Homology CDS 1682856 1683059 . + 0 ID=cds-WJH10092.1;Parent=gene-PUW31_08195;Dbxref=NCBI_GP:WJH10092.1;Name=WJH10092.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460469.1;locus_tag=PUW31_08195;product=putative selenium delivery protein YdfZ;protein_id=WJH10092.1;transl_table=11 CP118128.1 Genbank gene 1683126 1684055 . - . ID=gene-PUW31_08200;Name=PUW31_08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08200 CP118128.1 Protein Homology CDS 1683126 1684055 . - 0 ID=cds-WJH10697.1;Parent=gene-PUW31_08200;Dbxref=NCBI_GP:WJH10697.1;Name=WJH10697.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019736.2;locus_tag=PUW31_08200;product=mannitol dehydrogenase family protein;protein_id=WJH10697.1;transl_table=11 CP118128.1 Genbank gene 1684084 1684593 . - . ID=gene-PUW31_08205;Name=PUW31_08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08205 CP118128.1 Protein Homology CDS 1684084 1684593 . - 0 ID=cds-WJH10093.1;Parent=gene-PUW31_08205;Dbxref=NCBI_GP:WJH10093.1;Name=WJH10093.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013403.2;locus_tag=PUW31_08205;product=hypothetical protein;protein_id=WJH10093.1;transl_table=11 CP118128.1 Genbank pseudogene 1684737 1686115 . - . ID=gene-PUW31_08210;Name=PUW31_08210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_08210;pseudo=true CP118128.1 Protein Homology CDS 1684737 1686115 . - 0 ID=cds-PUW31_08210;Parent=gene-PUW31_08210;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210164.1;locus_tag=PUW31_08210;product=MFS transporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1686169 1687188 . - . ID=gene-PUW31_08215;Name=PUW31_08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08215 CP118128.1 Protein Homology CDS 1686169 1687188 . - 0 ID=cds-WJH10094.1;Parent=gene-PUW31_08215;Dbxref=NCBI_GP:WJH10094.1;Name=WJH10094.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460466.1;locus_tag=PUW31_08215;product=Zn-dependent oxidoreductase;protein_id=WJH10094.1;transl_table=11 CP118128.1 Genbank gene 1687199 1688413 . - . ID=gene-PUW31_08220;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=PUW31_08220 CP118128.1 Protein Homology CDS 1687199 1688413 . - 0 ID=cds-WJH10095.1;Parent=gene-PUW31_08220;Dbxref=NCBI_GP:WJH10095.1;Name=WJH10095.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=PUW31_08220;product=starvation-sensing protein RspA;protein_id=WJH10095.1;transl_table=11 CP118128.1 Genbank gene 1688535 1688861 . - . ID=gene-PUW31_08225;Name=PUW31_08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08225 CP118128.1 Protein Homology CDS 1688535 1688861 . - 0 ID=cds-WJH10096.1;Parent=gene-PUW31_08225;Dbxref=NCBI_GP:WJH10096.1;Name=WJH10096.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460464.1;locus_tag=PUW31_08225;product=YnfA family protein;protein_id=WJH10096.1;transl_table=11 CP118128.1 Genbank gene 1689013 1689354 . + . ID=gene-PUW31_08230;Name=PUW31_08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08230 CP118128.1 Protein Homology CDS 1689013 1689354 . + 0 ID=cds-WJH10097.1;Parent=gene-PUW31_08230;Dbxref=NCBI_GP:WJH10097.1;Name=WJH10097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460463.1;locus_tag=PUW31_08230;product=DUF1283 family protein;protein_id=WJH10097.1;transl_table=11 CP118128.1 Genbank gene 1689390 1689950 . + . ID=gene-PUW31_08235;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=PUW31_08235 CP118128.1 Protein Homology CDS 1689390 1689950 . + 0 ID=cds-WJH10098.1;Parent=gene-PUW31_08235;Dbxref=NCBI_GP:WJH10098.1;Name=WJH10098.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460462.1;locus_tag=PUW31_08235;product=spermidine N1-acetyltransferase;protein_id=WJH10098.1;transl_table=11 CP118128.1 Genbank gene 1689991 1690701 . - . ID=gene-PUW31_08240;Name=PUW31_08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08240 CP118128.1 Protein Homology CDS 1689991 1690701 . - 0 ID=cds-WJH10099.1;Parent=gene-PUW31_08240;Dbxref=NCBI_GP:WJH10099.1;Name=WJH10099.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465701.1;locus_tag=PUW31_08240;product=YnfC family lipoprotein;protein_id=WJH10099.1;transl_table=11 CP118128.1 Genbank gene 1690805 1691113 . + . ID=gene-PUW31_08245;Name=PUW31_08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08245 CP118128.1 Protein Homology CDS 1690805 1691113 . + 0 ID=cds-WJH10100.1;Parent=gene-PUW31_08245;Dbxref=NCBI_GP:WJH10100.1;Name=WJH10100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460460.1;locus_tag=PUW31_08245;product=DUF1161 domain-containing protein;protein_id=WJH10100.1;transl_table=11 CP118128.1 Genbank pseudogene 1691267 1693455 . + . ID=gene-PUW31_08250;Name=PUW31_08250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_08250;pseudo=true CP118128.1 Protein Homology CDS 1691267 1693455 . + 0 ID=cds-PUW31_08250;Parent=gene-PUW31_08250;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460459.1;locus_tag=PUW31_08250;product=molybdopterin-dependent oxidoreductase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1693554 1695989 . + . ID=gene-PUW31_08255;Name=PUW31_08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08255 CP118128.1 Protein Homology CDS 1693554 1695989 . + 0 ID=cds-WJH10101.1;Parent=gene-PUW31_08255;Dbxref=NCBI_GP:WJH10101.1;Name=WJH10101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460458.1;locus_tag=PUW31_08255;product=dimethyl sulfoxide reductase subunit A;protein_id=WJH10101.1;transl_table=11 CP118128.1 Genbank pseudogene 1696000 1696616 . + . ID=gene-PUW31_08260;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=pseudogene;locus_tag=PUW31_08260;pseudo=true CP118128.1 Protein Homology CDS 1696000 1696616 . + 0 ID=cds-PUW31_08260;Parent=gene-PUW31_08260;Note=frameshifted;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=PUW31_08260;product=dimethylsulfoxide reductase subunit B;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1696618 1697475 . + . ID=gene-PUW31_08265;Name=PUW31_08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08265 CP118128.1 Protein Homology CDS 1696618 1697475 . + 0 ID=cds-WJH10102.1;Parent=gene-PUW31_08265;Dbxref=NCBI_GP:WJH10102.1;Name=WJH10102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460456.1;locus_tag=PUW31_08265;product=dimethyl sulfoxide reductase anchor subunit;protein_id=WJH10102.1;transl_table=11 CP118128.1 Genbank gene 1697518 1698132 . + . ID=gene-PUW31_08270;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=PUW31_08270 CP118128.1 Protein Homology CDS 1697518 1698132 . + 0 ID=cds-WJH10103.1;Parent=gene-PUW31_08270;Dbxref=NCBI_GP:WJH10103.1;Name=WJH10103.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460455.1;locus_tag=PUW31_08270;product=Tat proofreading chaperone DmsD;protein_id=WJH10103.1;transl_table=11 CP118128.1 Genbank gene 1698437 1699114 . + . ID=gene-PUW31_08275;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=PUW31_08275 CP118128.1 Protein Homology CDS 1698437 1699114 . + 0 ID=cds-WJH10104.1;Parent=gene-PUW31_08275;Dbxref=NCBI_GP:WJH10104.1;Name=WJH10104.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460454.1;locus_tag=PUW31_08275;product=osmoprotectant ABC transporter permease OsmY;protein_id=WJH10104.1;transl_table=11 CP118128.1 Genbank gene 1699176 1700078 . + . ID=gene-PUW31_08280;Name=osmX;gbkey=Gene;gene=osmX;gene_biotype=protein_coding;locus_tag=PUW31_08280 CP118128.1 Protein Homology CDS 1699176 1700078 . + 0 ID=cds-WJH10105.1;Parent=gene-PUW31_08280;Dbxref=NCBI_GP:WJH10105.1;Name=WJH10105.1;gbkey=CDS;gene=osmX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460453.1;locus_tag=PUW31_08280;product=osmoprotectant ABC transporter substrate-binding protein OsmX;protein_id=WJH10105.1;transl_table=11 CP118128.1 Genbank gene 1700088 1700735 . + . ID=gene-PUW31_08285;Name=osmW;gbkey=Gene;gene=osmW;gene_biotype=protein_coding;locus_tag=PUW31_08285 CP118128.1 Protein Homology CDS 1700088 1700735 . + 0 ID=cds-WJH10106.1;Parent=gene-PUW31_08285;Dbxref=NCBI_GP:WJH10106.1;Name=WJH10106.1;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460452.1;locus_tag=PUW31_08285;product=osmoprotectant ABC transporter permease OsmW;protein_id=WJH10106.1;transl_table=11 CP118128.1 Genbank gene 1700735 1701883 . + . ID=gene-PUW31_08290;Name=osmV;gbkey=Gene;gene=osmV;gene_biotype=protein_coding;locus_tag=PUW31_08290 CP118128.1 Protein Homology CDS 1700735 1701883 . + 0 ID=cds-WJH10107.1;Parent=gene-PUW31_08290;Dbxref=NCBI_GP:WJH10107.1;Name=WJH10107.1;gbkey=CDS;gene=osmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460451.1;locus_tag=PUW31_08290;product=osmoprotectant ABC transporter ATP-binding protein OsmV;protein_id=WJH10107.1;transl_table=11 CP118128.1 Genbank gene 1702019 1703308 . + . ID=gene-PUW31_08295;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=PUW31_08295 CP118128.1 Protein Homology CDS 1702019 1703308 . + 0 ID=cds-WJH10108.1;Parent=gene-PUW31_08295;Dbxref=NCBI_GP:WJH10108.1;Name=WJH10108.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460450.3;locus_tag=PUW31_08295;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WJH10108.1;transl_table=11 CP118128.1 Genbank gene 1703264 1703959 . - . ID=gene-PUW31_08300;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=PUW31_08300 CP118128.1 Protein Homology CDS 1703264 1703959 . - 0 ID=cds-WJH10109.1;Parent=gene-PUW31_08300;Dbxref=NCBI_GP:WJH10109.1;Name=WJH10109.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460449.1;locus_tag=PUW31_08300;product=dethiobiotin synthase;protein_id=WJH10109.1;transl_table=11 CP118128.1 Genbank gene 1704085 1705305 . - . ID=gene-PUW31_08305;Name=PUW31_08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08305 CP118128.1 Protein Homology CDS 1704085 1705305 . - 0 ID=cds-WJH10110.1;Parent=gene-PUW31_08305;Dbxref=NCBI_GP:WJH10110.1;Name=WJH10110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460448.1;locus_tag=PUW31_08305;product=ROK family transcriptional regulator;protein_id=WJH10110.1;transl_table=11 CP118128.1 Genbank gene 1705433 1706332 . - . ID=gene-PUW31_08310;Name=PUW31_08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08310 CP118128.1 Protein Homology CDS 1705433 1706332 . - 0 ID=cds-WJH10111.1;Parent=gene-PUW31_08310;Dbxref=NCBI_GP:WJH10111.1;Name=WJH10111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460447.1;locus_tag=PUW31_08310;product=LysR family transcriptional regulator;protein_id=WJH10111.1;transl_table=11 CP118128.1 Genbank pseudogene 1706452 1707705 . + . ID=gene-PUW31_08315;Name=PUW31_08315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_08315;pseudo=true CP118128.1 Protein Homology CDS 1706452 1707705 . + 0 ID=cds-PUW31_08315;Parent=gene-PUW31_08315;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460446.1;locus_tag=PUW31_08315;product=MFS transporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1707772 1707864 . - . ID=gene-PUW31_08320;Name=PUW31_08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08320 CP118128.1 Protein Homology CDS 1707772 1707864 . - 0 ID=cds-WJH10112.1;Parent=gene-PUW31_08320;Dbxref=NCBI_GP:WJH10112.1;Name=WJH10112.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=PUW31_08320;product=KPN_01571 family protein;protein_id=WJH10112.1;transl_table=11 CP118128.1 Genbank gene 1708100 1708348 . + . ID=gene-PUW31_08325;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=PUW31_08325 CP118128.1 Protein Homology CDS 1708100 1708348 . + 0 ID=cds-WJH10698.1;Parent=gene-PUW31_08325;Dbxref=NCBI_GP:WJH10698.1;Name=WJH10698.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001698353.1;locus_tag=PUW31_08325;product=acid resistance repetitive basic protein Asr;protein_id=WJH10698.1;transl_table=11 CP118128.1 Genbank pseudogene 1708617 1709039 . + . ID=gene-PUW31_08330;Name=PUW31_08330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_08330;pseudo=true CP118128.1 Protein Homology CDS 1708617 1709039 . + 0 ID=cds-PUW31_08330;Parent=gene-PUW31_08330;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460444.1;locus_tag=PUW31_08330;product=serine protease;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1709240 1710274 . + . ID=gene-PUW31_08335;Name=PUW31_08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08335 CP118128.1 Protein Homology CDS 1709240 1710274 . + 0 ID=cds-WJH10113.1;Parent=gene-PUW31_08335;Dbxref=NCBI_GP:WJH10113.1;Name=WJH10113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460441.1;locus_tag=PUW31_08335;product=AI-2E family transporter;protein_id=WJH10113.1;transl_table=11 CP118128.1 Genbank gene 1710449 1711837 . - . ID=gene-PUW31_08340;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=PUW31_08340 CP118128.1 Protein Homology CDS 1710449 1711837 . - 0 ID=cds-WJH10114.1;Parent=gene-PUW31_08340;Dbxref=NCBI_GP:WJH10114.1;Name=WJH10114.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=NAD(P)+ transhydrogenase (AB-specific) activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=PUW31_08340;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WJH10114.1;transl_table=11 CP118128.1 Genbank gene 1711848 1713377 . - . ID=gene-PUW31_08345;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=PUW31_08345 CP118128.1 Protein Homology CDS 1711848 1713377 . - 0 ID=cds-WJH10115.1;Parent=gene-PUW31_08345;Dbxref=NCBI_GP:WJH10115.1;Name=WJH10115.1;Ontology_term=GO:0008750;gbkey=CDS;gene=pntA;go_function=NAD(P)+ transhydrogenase (AB-specific) activity|0008750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460439.1;locus_tag=PUW31_08345;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WJH10115.1;transl_table=11 CP118128.1 Genbank pseudogene 1713828 1713907 . + . ID=gene-PUW31_08350;Name=PUW31_08350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_08350;pseudo=true CP118128.1 Protein Homology CDS 1713828 1713907 . + 0 ID=cds-PUW31_08350;Parent=gene-PUW31_08350;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226730.1;locus_tag=PUW31_08350;product=hypothetical protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1713904 1714848 . + . ID=gene-PUW31_08355;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=PUW31_08355 CP118128.1 Protein Homology CDS 1713904 1714848 . + 0 ID=cds-WJH10116.1;Parent=gene-PUW31_08355;Dbxref=NCBI_GP:WJH10116.1;Name=WJH10116.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460438.1;locus_tag=PUW31_08355;product=DUF1471 family protein YdgH;protein_id=WJH10116.1;transl_table=11 CP118128.1 Genbank gene 1715147 1716529 . + . ID=gene-PUW31_08360;Name=PUW31_08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08360 CP118128.1 Protein Homology CDS 1715147 1716529 . + 0 ID=cds-WJH10117.1;Parent=gene-PUW31_08360;Dbxref=NCBI_GP:WJH10117.1;Name=WJH10117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460437.1;locus_tag=PUW31_08360;product=amino acid permease;protein_id=WJH10117.1;transl_table=11 CP118128.1 Genbank gene 1716591 1716926 . - . ID=gene-PUW31_08365;Name=PUW31_08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08365 CP118128.1 Protein Homology CDS 1716591 1716926 . - 0 ID=cds-WJH10118.1;Parent=gene-PUW31_08365;Dbxref=NCBI_GP:WJH10118.1;Name=WJH10118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460436.1;locus_tag=PUW31_08365;product=GlpM family protein;protein_id=WJH10118.1;transl_table=11 CP118128.1 Genbank gene 1717053 1717784 . + . ID=gene-PUW31_08370;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=PUW31_08370 CP118128.1 Protein Homology CDS 1717053 1717784 . + 0 ID=cds-WJH10119.1;Parent=gene-PUW31_08370;Dbxref=NCBI_GP:WJH10119.1;Name=WJH10119.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460435.1;locus_tag=PUW31_08370;product=two-component system response regulator RstA;protein_id=WJH10119.1;transl_table=11 CP118128.1 Genbank gene 1718264 1719409 . + . ID=gene-PUW31_08375;Name=ompS2;gbkey=Gene;gene=ompS2;gene_biotype=protein_coding;locus_tag=PUW31_08375 CP118128.1 Protein Homology CDS 1718264 1719409 . + 0 ID=cds-WJH10120.1;Parent=gene-PUW31_08375;Dbxref=NCBI_GP:WJH10120.1;Name=WJH10120.1;gbkey=CDS;gene=ompS2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460434.1;locus_tag=PUW31_08375;product=porin OmpS2;protein_id=WJH10120.1;transl_table=11 CP118128.1 Genbank pseudogene 1719562 1721268 . + . ID=gene-PUW31_08380;Name=PUW31_08380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_08380;pseudo=true CP118128.1 Protein Homology CDS 1719562 1721268 . + 0 ID=cds-PUW31_08380;Parent=gene-PUW31_08380;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460433.1;locus_tag=PUW31_08380;product=amidohydrolase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1721379 1722680 . + . ID=gene-PUW31_08385;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=PUW31_08385 CP118128.1 Protein Homology CDS 1721379 1722680 . + 0 ID=cds-WJH10121.1;Parent=gene-PUW31_08385;Dbxref=NCBI_GP:WJH10121.1;Name=WJH10121.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460432.1;locus_tag=PUW31_08385;product=two-component system sensor histidine kinase RstB;protein_id=WJH10121.1;transl_table=11 CP118128.1 Genbank gene 1722756 1723685 . + . ID=gene-PUW31_08390;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=PUW31_08390 CP118128.1 Protein Homology CDS 1722756 1723685 . + 0 ID=cds-WJH10122.1;Parent=gene-PUW31_08390;Dbxref=NCBI_GP:WJH10122.1;Name=WJH10122.1;Ontology_term=GO:0006274,GO:0003677;gbkey=CDS;gene=tus;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460431.1;locus_tag=PUW31_08390;product=DNA replication terminus site-binding protein;protein_id=WJH10122.1;transl_table=11 CP118128.1 Genbank gene 1723682 1725085 . - . ID=gene-PUW31_08395;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=PUW31_08395 CP118128.1 Protein Homology CDS 1723682 1725085 . - 0 ID=cds-WJH10123.1;Parent=gene-PUW31_08395;Dbxref=NCBI_GP:WJH10123.1;Name=WJH10123.1;Ontology_term=GO:0006099,GO:0004333;gbkey=CDS;gene=fumC;go_function=fumarate hydratase activity|0004333||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460430.1;locus_tag=PUW31_08395;product=class II fumarate hydratase;protein_id=WJH10123.1;transl_table=11 CP118128.1 Genbank gene 1725253 1726899 . - . ID=gene-PUW31_08400;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=PUW31_08400 CP118128.1 Protein Homology CDS 1725253 1726899 . - 0 ID=cds-WJH10124.1;Parent=gene-PUW31_08400;Dbxref=NCBI_GP:WJH10124.1;Name=WJH10124.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=PUW31_08400;product=class I fumarate hydratase;protein_id=WJH10124.1;transl_table=11 CP118128.1 Genbank gene 1727099 1728274 . + . ID=gene-PUW31_08405;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=PUW31_08405 CP118128.1 Protein Homology CDS 1727099 1728274 . + 0 ID=cds-WJH10125.1;Parent=gene-PUW31_08405;Dbxref=NCBI_GP:WJH10125.1;Name=WJH10125.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460428.1;locus_tag=PUW31_08405;product=mannose-6-phosphate isomerase;protein_id=WJH10125.1;transl_table=11 CP118128.1 Genbank gene 1728377 1729885 . + . ID=gene-PUW31_08410;Name=PUW31_08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08410 CP118128.1 Protein Homology CDS 1728377 1729885 . + 0 ID=cds-WJH10126.1;Parent=gene-PUW31_08410;Dbxref=NCBI_GP:WJH10126.1;Name=WJH10126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460427.1;locus_tag=PUW31_08410;product=YdgA family protein;protein_id=WJH10126.1;transl_table=11 CP118128.1 Genbank pseudogene 1730004 1730224 . + . ID=gene-PUW31_08415;Name=PUW31_08415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_08415;pseudo=true CP118128.1 Protein Homology CDS 1730004 1730224 . + 0 ID=cds-PUW31_08415;Parent=gene-PUW31_08415;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310356.1;locus_tag=PUW31_08415;product=glucose PTS transporter subunit EIIB;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 1730234 1730365 . + . ID=gene-PUW31_08420;Name=PUW31_08420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_08420;pseudo=true CP118128.1 Protein Homology CDS 1730234 1730365 . + 0 ID=cds-PUW31_08420;Parent=gene-PUW31_08420;Note=catalyzes the formation of homocysteine and pyruvate from cystathionine%3B also acts a a negative regulator for the mal regulon but interacting with the transcriptional activator MalT%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000459379.1;locus_tag=PUW31_08420;product=transcriptional regulator;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1730591 1731592 . + . ID=gene-PUW31_08425;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=PUW31_08425 CP118128.1 Protein Homology CDS 1730591 1731592 . + 0 ID=cds-WJH10127.1;Parent=gene-PUW31_08425;Dbxref=NCBI_GP:WJH10127.1;Name=WJH10127.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460426.1;locus_tag=PUW31_08425;product=adenosine deaminase;protein_id=WJH10127.1;transl_table=11 CP118128.1 Genbank gene 1731667 1732707 . - . ID=gene-PUW31_08430;Name=PUW31_08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08430 CP118128.1 Protein Homology CDS 1731667 1732707 . - 0 ID=cds-WJH10128.1;Parent=gene-PUW31_08430;Dbxref=NCBI_GP:WJH10128.1;Name=WJH10128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=PUW31_08430;product=oxidoreductase;protein_id=WJH10128.1;transl_table=11 CP118128.1 Genbank gene 1732915 1733040 . + . ID=gene-PUW31_08435;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=PUW31_08435 CP118128.1 Protein Homology CDS 1732915 1733040 . + 0 ID=cds-WJH10129.1;Parent=gene-PUW31_08435;Dbxref=NCBI_GP:WJH10129.1;Name=WJH10129.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=PUW31_08435;product=division septum protein Blr;protein_id=WJH10129.1;transl_table=11 CP118128.1 Genbank gene 1733338 1733553 . + . ID=gene-PUW31_08440;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=PUW31_08440 CP118128.1 Protein Homology CDS 1733338 1733553 . + 0 ID=cds-WJH10130.1;Parent=gene-PUW31_08440;Dbxref=NCBI_GP:WJH10130.1;Name=WJH10130.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460424.3;locus_tag=PUW31_08440;product=transcription modulator YdgT;protein_id=WJH10130.1;transl_table=11 CP118128.1 Genbank gene 1733642 1734082 . + . ID=gene-PUW31_08445;Name=PUW31_08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08445 CP118128.1 Protein Homology CDS 1733642 1734082 . + 0 ID=cds-WJH10131.1;Parent=gene-PUW31_08445;Dbxref=NCBI_GP:WJH10131.1;Name=WJH10131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460423.1;locus_tag=PUW31_08445;product=DUF2569 domain-containing protein;protein_id=WJH10131.1;transl_table=11 CP118128.1 Genbank gene 1734159 1734740 . + . ID=gene-PUW31_08450;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=PUW31_08450 CP118128.1 Protein Homology CDS 1734159 1734740 . + 0 ID=cds-WJH10132.1;Parent=gene-PUW31_08450;Dbxref=NCBI_GP:WJH10132.1;Name=WJH10132.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=PUW31_08450;product=electron transport complex subunit RsxA;protein_id=WJH10132.1;transl_table=11 CP118128.1 Genbank gene 1734740 1735318 . + . ID=gene-PUW31_08455;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=PUW31_08455 CP118128.1 Protein Homology CDS 1734740 1735318 . + 0 ID=cds-WJH10133.1;Parent=gene-PUW31_08455;Dbxref=NCBI_GP:WJH10133.1;Name=WJH10133.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460421.1;locus_tag=PUW31_08455;product=electron transport complex subunit RsxB;protein_id=WJH10133.1;transl_table=11 CP118128.1 Genbank gene 1735311 1737332 . + . ID=gene-PUW31_08460;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=PUW31_08460 CP118128.1 Protein Homology CDS 1735311 1737332 . + 0 ID=cds-WJH10134.1;Parent=gene-PUW31_08460;Dbxref=NCBI_GP:WJH10134.1;Name=WJH10134.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460420.1;locus_tag=PUW31_08460;product=electron transport complex subunit RsxC;protein_id=WJH10134.1;transl_table=11 CP118128.1 Genbank gene 1737333 1738391 . + . ID=gene-PUW31_08465;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=PUW31_08465 CP118128.1 Protein Homology CDS 1737333 1738391 . + 0 ID=cds-WJH10135.1;Parent=gene-PUW31_08465;Dbxref=NCBI_GP:WJH10135.1;Name=WJH10135.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460419.1;locus_tag=PUW31_08465;product=electron transport complex subunit RsxD;protein_id=WJH10135.1;transl_table=11 CP118128.1 Genbank gene 1738395 1739015 . + . ID=gene-PUW31_08470;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=PUW31_08470 CP118128.1 Protein Homology CDS 1738395 1739015 . + 0 ID=cds-WJH10136.1;Parent=gene-PUW31_08470;Dbxref=NCBI_GP:WJH10136.1;Name=WJH10136.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460418.1;locus_tag=PUW31_08470;product=electron transport complex subunit RsxG;protein_id=WJH10136.1;transl_table=11 CP118128.1 Genbank gene 1739018 1739710 . + . ID=gene-PUW31_08475;Name=PUW31_08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08475 CP118128.1 Protein Homology CDS 1739018 1739710 . + 0 ID=cds-WJH10137.1;Parent=gene-PUW31_08475;Dbxref=NCBI_GP:WJH10137.1;Name=WJH10137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460417.1;locus_tag=PUW31_08475;product=electron transport complex subunit E;protein_id=WJH10137.1;transl_table=11 CP118128.1 Genbank gene 1739710 1740345 . + . ID=gene-PUW31_08480;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=PUW31_08480 CP118128.1 Protein Homology CDS 1739710 1740345 . + 0 ID=cds-WJH10138.1;Parent=gene-PUW31_08480;Dbxref=NCBI_GP:WJH10138.1;Name=WJH10138.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460416.1;locus_tag=PUW31_08480;product=endonuclease III;protein_id=WJH10138.1;transl_table=11 CP118128.1 Genbank pseudogene 1740946 1742450 . + . ID=gene-PUW31_08485;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=pseudogene;locus_tag=PUW31_08485;pseudo=true CP118128.1 Protein Homology CDS 1740946 1742450 . + 0 ID=cds-PUW31_08485;Parent=gene-PUW31_08485;Note=frameshifted;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460415.1;locus_tag=PUW31_08485;product=dipeptide/tripeptide permease DtpA;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1742554 1743159 . + . ID=gene-PUW31_08490;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=PUW31_08490 CP118128.1 Protein Homology CDS 1742554 1743159 . + 0 ID=cds-WJH10139.1;Parent=gene-PUW31_08490;Dbxref=NCBI_GP:WJH10139.1;Name=WJH10139.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460414.1;locus_tag=PUW31_08490;product=glutathione transferase GstA;protein_id=WJH10139.1;transl_table=11 CP118128.1 Genbank gene 1743218 1744078 . - . ID=gene-PUW31_08495;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=PUW31_08495 CP118128.1 Protein Homology CDS 1743218 1744078 . - 0 ID=cds-WJH10140.1;Parent=gene-PUW31_08495;Dbxref=NCBI_GP:WJH10140.1;Name=WJH10140.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460413.1;locus_tag=PUW31_08495;product=pyridoxal kinase PdxY;protein_id=WJH10140.1;transl_table=11 CP118128.1 Genbank gene 1744138 1745412 . - . ID=gene-PUW31_08500;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=PUW31_08500 CP118128.1 Protein Homology CDS 1744138 1745412 . - 0 ID=cds-WJH10141.1;Parent=gene-PUW31_08500;Dbxref=NCBI_GP:WJH10141.1;Name=WJH10141.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460412.1;locus_tag=PUW31_08500;product=tyrosine--tRNA ligase;protein_id=WJH10141.1;transl_table=11 CP118128.1 Genbank gene 1745539 1746195 . - . ID=gene-PUW31_08505;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=PUW31_08505 CP118128.1 Protein Homology CDS 1745539 1746195 . - 0 ID=cds-WJH10142.1;Parent=gene-PUW31_08505;Dbxref=NCBI_GP:WJH10142.1;Name=WJH10142.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine-phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=PUW31_08505;product=pyridoxamine 5'-phosphate oxidase;protein_id=WJH10142.1;transl_table=11 CP118128.1 Genbank gene 1746254 1746583 . - . ID=gene-PUW31_08510;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=PUW31_08510 CP118128.1 Protein Homology CDS 1746254 1746583 . - 0 ID=cds-WJH10143.1;Parent=gene-PUW31_08510;Dbxref=NCBI_GP:WJH10143.1;Name=WJH10143.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460410.1;locus_tag=PUW31_08510;product=C-type lysozyme inhibitor;protein_id=WJH10143.1;transl_table=11 CP118128.1 Genbank gene 1746671 1747792 . - . ID=gene-PUW31_08515;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=PUW31_08515 CP118128.1 Protein Homology CDS 1746671 1747792 . - 0 ID=cds-WJH10144.1;Parent=gene-PUW31_08515;Dbxref=NCBI_GP:WJH10144.1;Name=WJH10144.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460409.1;locus_tag=PUW31_08515;product=anhydro-N-acetylmuramic acid kinase;protein_id=WJH10144.1;transl_table=11 CP118128.1 Genbank gene 1748064 1748531 . + . ID=gene-PUW31_08520;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=PUW31_08520 CP118128.1 Protein Homology CDS 1748064 1748531 . + 0 ID=cds-WJH10145.1;Parent=gene-PUW31_08520;Dbxref=NCBI_GP:WJH10145.1;Name=WJH10145.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460408.1;locus_tag=PUW31_08520;product=outer membrane lipoprotein SlyB;protein_id=WJH10145.1;transl_table=11 CP118128.1 Genbank gene 1748579 1749019 . - . ID=gene-PUW31_08525;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=PUW31_08525 CP118128.1 Protein Homology CDS 1748579 1749019 . - 0 ID=cds-WJH10146.1;Parent=gene-PUW31_08525;Dbxref=NCBI_GP:WJH10146.1;Name=WJH10146.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=PUW31_08525;product=transcriptional regulator SlyA;protein_id=WJH10146.1;transl_table=11 CP118128.1 Genbank gene 1749214 1749450 . + . ID=gene-PUW31_08530;Name=PUW31_08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08530 CP118128.1 Protein Homology CDS 1749214 1749450 . + 0 ID=cds-WJH10147.1;Parent=gene-PUW31_08530;Dbxref=NCBI_GP:WJH10147.1;Name=WJH10147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460406.1;locus_tag=PUW31_08530;product=DUF1656 domain-containing protein;protein_id=WJH10147.1;transl_table=11 CP118128.1 Genbank gene 1749453 1750313 . + . ID=gene-PUW31_08535;Name=PUW31_08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08535 CP118128.1 Protein Homology CDS 1749453 1750313 . + 0 ID=cds-WJH10148.1;Parent=gene-PUW31_08535;Dbxref=NCBI_GP:WJH10148.1;Name=WJH10148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218841.1;locus_tag=PUW31_08535;product=HlyD family secretion protein;protein_id=WJH10148.1;transl_table=11 CP118128.1 Genbank gene 1750313 1752352 . + . ID=gene-PUW31_08540;Name=PUW31_08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08540 CP118128.1 Protein Homology CDS 1750313 1752352 . + 0 ID=cds-WJH10149.1;Parent=gene-PUW31_08540;Dbxref=NCBI_GP:WJH10149.1;Name=WJH10149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460404.1;locus_tag=PUW31_08540;product=FUSC family protein;protein_id=WJH10149.1;transl_table=11 CP118128.1 Genbank gene 1752328 1752849 . - . ID=gene-PUW31_08545;Name=sodC2;gbkey=Gene;gene=sodC2;gene_biotype=protein_coding;gene_synonym=sodCII;locus_tag=PUW31_08545 CP118128.1 Protein Homology CDS 1752328 1752849 . - 0 ID=cds-WJH10150.1;Parent=gene-PUW31_08545;Dbxref=NCBI_GP:WJH10150.1;Name=WJH10150.1;gbkey=CDS;gene=sodC2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460403.1;locus_tag=PUW31_08545;product=superoxide dismutase [Cu-Zn] SodC2;protein_id=WJH10150.1;transl_table=11 CP118128.1 Genbank pseudogene 1752929 1753825 . - . ID=gene-PUW31_08550;Name=PUW31_08550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_08550;pseudo=true CP118128.1 Protein Homology CDS 1752929 1753825 . - 0 ID=cds-PUW31_08550;Parent=gene-PUW31_08550;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460402.1;locus_tag=PUW31_08550;product=aldo/keto reductase family oxidoreductase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1753876 1754115 . - . ID=gene-PUW31_08555;Name=PUW31_08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08555 CP118128.1 Protein Homology CDS 1753876 1754115 . - 0 ID=cds-WJH10151.1;Parent=gene-PUW31_08555;Dbxref=NCBI_GP:WJH10151.1;Name=WJH10151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460401.1;locus_tag=PUW31_08555;product=DUF1289 domain-containing protein;protein_id=WJH10151.1;transl_table=11 CP118128.1 Genbank gene 1754218 1754817 . + . ID=gene-PUW31_08560;Name=PUW31_08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08560 CP118128.1 Protein Homology CDS 1754218 1754817 . + 0 ID=cds-WJH10152.1;Parent=gene-PUW31_08560;Dbxref=NCBI_GP:WJH10152.1;Name=WJH10152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460400.1;locus_tag=PUW31_08560;product=TetR/AcrR family transcriptional regulator;protein_id=WJH10152.1;transl_table=11 CP118128.1 Genbank pseudogene 1754876 1755972 . + . ID=gene-PUW31_08565;Name=PUW31_08565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_08565;pseudo=true CP118128.1 Protein Homology CDS 1754876 1755972 . + 0 ID=cds-PUW31_08565;Parent=gene-PUW31_08565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460399.1;locus_tag=PUW31_08565;product=alkene reductase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1756041 1756448 . + . ID=gene-PUW31_08570;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=PUW31_08570 CP118128.1 Protein Homology CDS 1756041 1756448 . + 0 ID=cds-WJH10153.1;Parent=gene-PUW31_08570;Dbxref=NCBI_GP:WJH10153.1;Name=WJH10153.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=PUW31_08570;product=lactoylglutathione lyase;protein_id=WJH10153.1;transl_table=11 CP118128.1 Genbank gene 1756548 1757195 . + . ID=gene-PUW31_08575;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=PUW31_08575 CP118128.1 Protein Homology CDS 1756548 1757195 . + 0 ID=cds-WJH10154.1;Parent=gene-PUW31_08575;Dbxref=NCBI_GP:WJH10154.1;Name=WJH10154.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=exoribonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460397.1;locus_tag=PUW31_08575;product=ribonuclease T;protein_id=WJH10154.1;transl_table=11 CP118128.1 Genbank gene 1757273 1757620 . - . ID=gene-PUW31_08580;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=PUW31_08580 CP118128.1 Protein Homology CDS 1757273 1757620 . - 0 ID=cds-WJH10155.1;Parent=gene-PUW31_08580;Dbxref=NCBI_GP:WJH10155.1;Name=WJH10155.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460396.1;locus_tag=PUW31_08580;product=monothiol glutaredoxin 4;protein_id=WJH10155.1;transl_table=11 CP118128.1 Genbank gene 1757956 1758777 . + . ID=gene-PUW31_08585;Name=PUW31_08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08585 CP118128.1 Protein Homology CDS 1757956 1758777 . + 0 ID=cds-WJH10156.1;Parent=gene-PUW31_08585;Dbxref=NCBI_GP:WJH10156.1;Name=WJH10156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310391.1;locus_tag=PUW31_08585;product=C40 family peptidase;protein_id=WJH10156.1;transl_table=11 CP118128.1 Genbank gene 1758904 1759485 . + . ID=gene-PUW31_08590;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=PUW31_08590 CP118128.1 Protein Homology CDS 1758904 1759485 . + 0 ID=cds-WJH10157.1;Parent=gene-PUW31_08590;Dbxref=NCBI_GP:WJH10157.1;Name=WJH10157.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460394.1;locus_tag=PUW31_08590;product=superoxide dismutase [Fe];protein_id=WJH10157.1;transl_table=11 CP118128.1 Genbank gene 1759568 1759657 . - . ID=gene-PUW31_08595;Name=PUW31_08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08595 CP118128.1 Protein Homology CDS 1759568 1759657 . - 0 ID=cds-WJH10158.1;Parent=gene-PUW31_08595;Dbxref=NCBI_GP:WJH10158.1;Name=WJH10158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=PUW31_08595;product=YnhF family membrane protein;protein_id=WJH10158.1;transl_table=11 CP118128.1 Genbank gene 1759953 1760978 . + . ID=gene-PUW31_08600;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=PUW31_08600 CP118128.1 Protein Homology CDS 1759953 1760978 . + 0 ID=cds-WJH10159.1;Parent=gene-PUW31_08600;Dbxref=NCBI_GP:WJH10159.1;Name=WJH10159.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=PUW31_08600;product=HTH-type transcriptional repressor PurR;protein_id=WJH10159.1;transl_table=11 CP118128.1 Genbank gene 1760975 1761907 . - . ID=gene-PUW31_08605;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=PUW31_08605 CP118128.1 Protein Homology CDS 1760975 1761907 . - 0 ID=cds-WJH10160.1;Parent=gene-PUW31_08605;Dbxref=NCBI_GP:WJH10160.1;Name=WJH10160.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460392.1;locus_tag=PUW31_08605;product=DNA-binding transcriptional activator PunR;protein_id=WJH10160.1;transl_table=11 CP118128.1 Genbank gene 1762020 1763225 . + . ID=gene-PUW31_08610;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;locus_tag=PUW31_08610 CP118128.1 Protein Homology CDS 1762020 1763225 . + 0 ID=cds-WJH10161.1;Parent=gene-PUW31_08610;Dbxref=NCBI_GP:WJH10161.1;Name=WJH10161.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460391.1;locus_tag=PUW31_08610;product=purine nucleoside transporter PunC;protein_id=WJH10161.1;transl_table=11 CP118128.1 Genbank gene 1763515 1764663 . + . ID=gene-PUW31_08615;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=PUW31_08615 CP118128.1 Protein Homology CDS 1763515 1764663 . + 0 ID=cds-WJH10162.1;Parent=gene-PUW31_08615;Dbxref=NCBI_GP:WJH10162.1;Name=WJH10162.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460390.1;locus_tag=PUW31_08615;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WJH10162.1;transl_table=11 CP118128.1 Genbank gene 1764705 1765346 . - . ID=gene-PUW31_08620;Name=PUW31_08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08620 CP118128.1 Protein Homology CDS 1764705 1765346 . - 0 ID=cds-WJH10163.1;Parent=gene-PUW31_08620;Dbxref=NCBI_GP:WJH10163.1;Name=WJH10163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460389.1;locus_tag=PUW31_08620;product=riboflavin synthase;protein_id=WJH10163.1;transl_table=11 CP118128.1 Genbank pseudogene 1765563 1766935 . + . ID=gene-PUW31_08625;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=pseudogene;locus_tag=PUW31_08625;pseudo=true CP118128.1 Protein Homology CDS 1765563 1766935 . + 0 ID=cds-PUW31_08625;Parent=gene-PUW31_08625;Note=frameshifted;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460388.2;locus_tag=PUW31_08625;product=multidrug efflux MATE transporter MdtK;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1767087 1767163 . + . ID=gene-PUW31_08630;Name=PUW31_08630;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_08630 CP118128.1 tRNAscan-SE tRNA 1767087 1767163 . + . ID=rna-PUW31_08630;Parent=gene-PUW31_08630;anticodon=(pos:1767121..1767123);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_08630;product=tRNA-Val CP118128.1 tRNAscan-SE exon 1767087 1767163 . + . ID=exon-PUW31_08630-1;Parent=rna-PUW31_08630;anticodon=(pos:1767121..1767123);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_08630;product=tRNA-Val CP118128.1 Genbank gene 1767174 1767250 . + . ID=gene-PUW31_08635;Name=PUW31_08635;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_08635 CP118128.1 tRNAscan-SE tRNA 1767174 1767250 . + . ID=rna-PUW31_08635;Parent=gene-PUW31_08635;anticodon=(pos:1767208..1767210);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_08635;product=tRNA-Val CP118128.1 tRNAscan-SE exon 1767174 1767250 . + . ID=exon-PUW31_08635-1;Parent=rna-PUW31_08635;anticodon=(pos:1767208..1767210);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_08635;product=tRNA-Val CP118128.1 Genbank gene 1767408 1768466 . - . ID=gene-PUW31_08640;Name=ssaU;gbkey=Gene;gene=ssaU;gene_biotype=protein_coding;locus_tag=PUW31_08640 CP118128.1 Protein Homology CDS 1767408 1768466 . - 0 ID=cds-WJH10164.1;Parent=gene-PUW31_08640;Dbxref=NCBI_GP:WJH10164.1;Name=WJH10164.1;gbkey=CDS;gene=ssaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460387.1;locus_tag=PUW31_08640;product=SPI-2 type III secretion system apparatus protein SsaU;protein_id=WJH10164.1;transl_table=11 CP118128.1 Genbank gene 1768463 1769242 . - . ID=gene-PUW31_08645;Name=ssaT;gbkey=Gene;gene=ssaT;gene_biotype=protein_coding;locus_tag=PUW31_08645 CP118128.1 Protein Homology CDS 1768463 1769242 . - 0 ID=cds-WJH10165.1;Parent=gene-PUW31_08645;Dbxref=NCBI_GP:WJH10165.1;Name=WJH10165.1;gbkey=CDS;gene=ssaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460386.1;locus_tag=PUW31_08645;product=SPI-2 type III secretion system apparatus protein SsaT;protein_id=WJH10165.1;transl_table=11 CP118128.1 Genbank gene 1769243 1769509 . - . ID=gene-PUW31_08650;Name=ssas;gbkey=Gene;gene=ssas;gene_biotype=protein_coding;locus_tag=PUW31_08650 CP118128.1 Protein Homology CDS 1769243 1769509 . - 0 ID=cds-WJH10166.1;Parent=gene-PUW31_08650;Dbxref=NCBI_GP:WJH10166.1;Name=WJH10166.1;gbkey=CDS;gene=ssas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460385.1;locus_tag=PUW31_08650;product=SPI-2 type III secretion system apparatus protein SsaS;protein_id=WJH10166.1;transl_table=11 CP118128.1 Genbank gene 1769506 1770153 . - . ID=gene-PUW31_08655;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;locus_tag=PUW31_08655 CP118128.1 Protein Homology CDS 1769506 1770153 . - 0 ID=cds-WJH10167.1;Parent=gene-PUW31_08655;Dbxref=NCBI_GP:WJH10167.1;Name=WJH10167.1;gbkey=CDS;gene=ssaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460384.1;locus_tag=PUW31_08655;product=SPI-2 type III secretion system export apparatus protein SsaR;protein_id=WJH10167.1;transl_table=11 CP118128.1 Genbank gene 1770221 1771189 . - . ID=gene-PUW31_08660;Name=ssaQ;gbkey=Gene;gene=ssaQ;gene_biotype=protein_coding;locus_tag=PUW31_08660 CP118128.1 Protein Homology CDS 1770221 1771189 . - 0 ID=cds-WJH10168.1;Parent=gene-PUW31_08660;Dbxref=NCBI_GP:WJH10168.1;Name=WJH10168.1;gbkey=CDS;gene=ssaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460383.1;locus_tag=PUW31_08660;product=SPI-2 type III secretion system cytoplasmic ring protein SsaQ;protein_id=WJH10168.1;transl_table=11 CP118128.1 Genbank gene 1771170 1771544 . - . ID=gene-PUW31_08665;Name=ssaP;gbkey=Gene;gene=ssaP;gene_biotype=protein_coding;locus_tag=PUW31_08665 CP118128.1 Protein Homology CDS 1771170 1771544 . - 0 ID=cds-WJH10169.1;Parent=gene-PUW31_08665;Dbxref=NCBI_GP:WJH10169.1;Name=WJH10169.1;gbkey=CDS;gene=ssaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460382.1;locus_tag=PUW31_08665;product=SPI-2 type III secretion system apparatus protein SsaP;protein_id=WJH10169.1;transl_table=11 CP118128.1 Genbank gene 1771525 1771902 . - . ID=gene-PUW31_08670;Name=ssaO;gbkey=Gene;gene=ssaO;gene_biotype=protein_coding;locus_tag=PUW31_08670 CP118128.1 Protein Homology CDS 1771525 1771902 . - 0 ID=cds-WJH10699.1;Parent=gene-PUW31_08670;Dbxref=NCBI_GP:WJH10699.1;Name=WJH10699.1;gbkey=CDS;gene=ssaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460381.1;locus_tag=PUW31_08670;product=SPI-2 type III secretion system apparatus protein SsaO;protein_id=WJH10699.1;transl_table=11 CP118128.1 Genbank gene 1771905 1773206 . - . ID=gene-PUW31_08675;Name=ssaN;gbkey=Gene;gene=ssaN;gene_biotype=protein_coding;locus_tag=PUW31_08675 CP118128.1 Protein Homology CDS 1771905 1773206 . - 0 ID=cds-WJH10170.1;Parent=gene-PUW31_08675;Dbxref=NCBI_GP:WJH10170.1;Name=WJH10170.1;gbkey=CDS;gene=ssaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460380.1;locus_tag=PUW31_08675;product=SctN family type III secretion system ATPase SsaN;protein_id=WJH10170.1;transl_table=11 CP118128.1 Genbank gene 1773196 1775241 . - . ID=gene-PUW31_08680;Name=ssaV;gbkey=Gene;gene=ssaV;gene_biotype=protein_coding;locus_tag=PUW31_08680 CP118128.1 Protein Homology CDS 1773196 1775241 . - 0 ID=cds-WJH10171.1;Parent=gene-PUW31_08680;Dbxref=NCBI_GP:WJH10171.1;Name=WJH10171.1;gbkey=CDS;gene=ssaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460379.1;locus_tag=PUW31_08680;product=SPI-2 type III secretion system apparatus protein SsaV;protein_id=WJH10171.1;transl_table=11 CP118128.1 Genbank gene 1775226 1775594 . - . ID=gene-PUW31_08685;Name=ssaM;gbkey=Gene;gene=ssaM;gene_biotype=protein_coding;locus_tag=PUW31_08685 CP118128.1 Protein Homology CDS 1775226 1775594 . - 0 ID=cds-WJH10172.1;Parent=gene-PUW31_08685;Dbxref=NCBI_GP:WJH10172.1;Name=WJH10172.1;gbkey=CDS;gene=ssaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460378.1;locus_tag=PUW31_08685;product=SPI-2 type III secretion system apparatus protein SsaM;protein_id=WJH10172.1;transl_table=11 CP118128.1 Genbank gene 1775652 1776668 . - . ID=gene-PUW31_08690;Name=ssaL;gbkey=Gene;gene=ssaL;gene_biotype=protein_coding;locus_tag=PUW31_08690 CP118128.1 Protein Homology CDS 1775652 1776668 . - 0 ID=cds-WJH10173.1;Parent=gene-PUW31_08690;Dbxref=NCBI_GP:WJH10173.1;Name=WJH10173.1;gbkey=CDS;gene=ssaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460377.1;locus_tag=PUW31_08690;product=SPI-2 type III secretion system apparatus protein SsaL;protein_id=WJH10173.1;transl_table=11 CP118128.1 Genbank gene 1776634 1777308 . - . ID=gene-PUW31_08695;Name=ssaK;gbkey=Gene;gene=ssaK;gene_biotype=protein_coding;locus_tag=PUW31_08695 CP118128.1 Protein Homology CDS 1776634 1777308 . - 0 ID=cds-WJH10174.1;Parent=gene-PUW31_08695;Dbxref=NCBI_GP:WJH10174.1;Name=WJH10174.1;gbkey=CDS;gene=ssaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460376.1;locus_tag=PUW31_08695;product=SPI-2 type III secretion system apparatus protein SsaK;protein_id=WJH10174.1;transl_table=11 CP118128.1 Genbank gene 1777305 1777853 . - . ID=gene-PUW31_08700;Name=PUW31_08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08700 CP118128.1 Protein Homology CDS 1777305 1777853 . - 0 ID=cds-WJH10700.1;Parent=gene-PUW31_08700;Dbxref=NCBI_GP:WJH10700.1;Name=WJH10700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460375.1;locus_tag=PUW31_08700;product=type III secretion system domain-containing protein;protein_id=WJH10700.1;transl_table=11 CP118128.1 Genbank gene 1777861 1778619 . - . ID=gene-PUW31_08705;Name=ssaJ;gbkey=Gene;gene=ssaJ;gene_biotype=protein_coding;locus_tag=PUW31_08705 CP118128.1 Protein Homology CDS 1777861 1778619 . - 0 ID=cds-WJH10175.1;Parent=gene-PUW31_08705;Dbxref=NCBI_GP:WJH10175.1;Name=WJH10175.1;gbkey=CDS;gene=ssaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460374.1;locus_tag=PUW31_08705;product=SPI-2 type III secretion system apparatus lipoprotein SsaJ;protein_id=WJH10175.1;transl_table=11 CP118128.1 Genbank gene 1778616 1778864 . - . ID=gene-PUW31_08710;Name=ssaI;gbkey=Gene;gene=ssaI;gene_biotype=protein_coding;locus_tag=PUW31_08710 CP118128.1 Protein Homology CDS 1778616 1778864 . - 0 ID=cds-WJH10701.1;Parent=gene-PUW31_08710;Dbxref=NCBI_GP:WJH10701.1;Name=WJH10701.1;gbkey=CDS;gene=ssaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460373.1;locus_tag=PUW31_08710;product=SctI family type III secretion system inner rod subunit SsaI;protein_id=WJH10701.1;transl_table=11 CP118128.1 Genbank gene 1778876 1779166 . - . ID=gene-PUW31_08715;Name=PUW31_08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08715 CP118128.1 Protein Homology CDS 1778876 1779166 . - 0 ID=cds-WJH10176.1;Parent=gene-PUW31_08715;Dbxref=NCBI_GP:WJH10176.1;Name=WJH10176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531123.1;locus_tag=PUW31_08715;product=EscG/YscG/SsaH family type III secretion system needle protein co-chaperone;protein_id=WJH10176.1;transl_table=11 CP118128.1 Genbank gene 1779144 1779359 . - . ID=gene-PUW31_08720;Name=ssaG;gbkey=Gene;gene=ssaG;gene_biotype=protein_coding;locus_tag=PUW31_08720 CP118128.1 Protein Homology CDS 1779144 1779359 . - 0 ID=cds-WJH10177.1;Parent=gene-PUW31_08720;Dbxref=NCBI_GP:WJH10177.1;Name=WJH10177.1;gbkey=CDS;gene=ssaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460371.1;locus_tag=PUW31_08720;product=type III secretion system needle filament protein SsaG;protein_id=WJH10177.1;transl_table=11 CP118128.1 Genbank gene 1779453 1780142 . - . ID=gene-PUW31_08725;Name=sseG;gbkey=Gene;gene=sseG;gene_biotype=protein_coding;locus_tag=PUW31_08725 CP118128.1 Protein Homology CDS 1779453 1780142 . - 0 ID=cds-WJH10178.1;Parent=gene-PUW31_08725;Dbxref=NCBI_GP:WJH10178.1;Name=WJH10178.1;Note=SseG%2C from Salmonella pathogenicity island 2%2C is a type III secretion system (T3SS) effector protein.;gbkey=CDS;gene=sseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460370.1;locus_tag=PUW31_08725;product=pathogenicity island 2 effector protein SseG;protein_id=WJH10178.1;transl_table=11 CP118128.1 Genbank gene 1780139 1780921 . - . ID=gene-PUW31_08730;Name=sseF;gbkey=Gene;gene=sseF;gene_biotype=protein_coding;locus_tag=PUW31_08730 CP118128.1 Protein Homology CDS 1780139 1780921 . - 0 ID=cds-WJH10179.1;Parent=gene-PUW31_08730;Dbxref=NCBI_GP:WJH10179.1;Name=WJH10179.1;gbkey=CDS;gene=sseF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460369.1;locus_tag=PUW31_08730;product=type III secretion systems effector SseF;protein_id=WJH10179.1;transl_table=11 CP118128.1 Genbank gene 1780937 1781371 . - . ID=gene-PUW31_08735;Name=sscB;gbkey=Gene;gene=sscB;gene_biotype=protein_coding;locus_tag=PUW31_08735 CP118128.1 Protein Homology CDS 1780937 1781371 . - 0 ID=cds-WJH10180.1;Parent=gene-PUW31_08735;Dbxref=NCBI_GP:WJH10180.1;Name=WJH10180.1;gbkey=CDS;gene=sscB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460368.1;locus_tag=PUW31_08735;product=SycD/LcrH family type III secretion system chaperone SscB;protein_id=WJH10180.1;transl_table=11 CP118128.1 Genbank gene 1781423 1781839 . - . ID=gene-PUW31_08740;Name=sseE;gbkey=Gene;gene=sseE;gene_biotype=protein_coding;locus_tag=PUW31_08740 CP118128.1 Protein Homology CDS 1781423 1781839 . - 0 ID=cds-WJH10181.1;Parent=gene-PUW31_08740;Dbxref=NCBI_GP:WJH10181.1;Name=WJH10181.1;gbkey=CDS;gene=sseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460367.1;locus_tag=PUW31_08740;product=LcrR family type III secretion system chaperone SseE;protein_id=WJH10181.1;transl_table=11 CP118128.1 Genbank gene 1781842 1782429 . - . ID=gene-PUW31_08745;Name=sseD;gbkey=Gene;gene=sseD;gene_biotype=protein_coding;locus_tag=PUW31_08745 CP118128.1 Protein Homology CDS 1781842 1782429 . - 0 ID=cds-WJH10182.1;Parent=gene-PUW31_08745;Dbxref=NCBI_GP:WJH10182.1;Name=WJH10182.1;gbkey=CDS;gene=sseD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460366.1;locus_tag=PUW31_08745;product=SPI-2 type III secretion system translocon protein SseD;protein_id=WJH10182.1;transl_table=11 CP118128.1 Genbank gene 1782445 1783899 . - . ID=gene-PUW31_08750;Name=sseC;gbkey=Gene;gene=sseC;gene_biotype=protein_coding;locus_tag=PUW31_08750 CP118128.1 Protein Homology CDS 1782445 1783899 . - 0 ID=cds-WJH10183.1;Parent=gene-PUW31_08750;Dbxref=NCBI_GP:WJH10183.1;Name=WJH10183.1;gbkey=CDS;gene=sseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460365.1;locus_tag=PUW31_08750;product=SPI-2 type III secretion system translocon protein SseC;protein_id=WJH10183.1;transl_table=11 CP118128.1 Genbank gene 1783902 1784375 . - . ID=gene-PUW31_08755;Name=sscA;gbkey=Gene;gene=sscA;gene_biotype=protein_coding;locus_tag=PUW31_08755 CP118128.1 Protein Homology CDS 1783902 1784375 . - 0 ID=cds-WJH10184.1;Parent=gene-PUW31_08755;Dbxref=NCBI_GP:WJH10184.1;Name=WJH10184.1;gbkey=CDS;gene=sscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460364.1;locus_tag=PUW31_08755;product=SycD/LcrH family type III secretion system chaperone SscA;protein_id=WJH10184.1;transl_table=11 CP118128.1 Genbank gene 1784372 1784962 . - . ID=gene-PUW31_08760;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=PUW31_08760 CP118128.1 Protein Homology CDS 1784372 1784962 . - 0 ID=cds-WJH10185.1;Parent=gene-PUW31_08760;Dbxref=NCBI_GP:WJH10185.1;Name=WJH10185.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460363.1;locus_tag=PUW31_08760;product=SPI-2 type III secretion system translocon protein SseB;protein_id=WJH10185.1;transl_table=11 CP118128.1 Genbank gene 1784969 1785295 . - . ID=gene-PUW31_08765;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=PUW31_08765 CP118128.1 Protein Homology CDS 1784969 1785295 . - 0 ID=cds-WJH10702.1;Parent=gene-PUW31_08765;Dbxref=NCBI_GP:WJH10702.1;Name=WJH10702.1;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460362.1;locus_tag=PUW31_08765;product=SPI-2 type III secretion system chaperone SseA;protein_id=WJH10702.1;transl_table=11 CP118128.1 Genbank gene 1785498 1785740 . - . ID=gene-PUW31_08770;Name=ssaE;gbkey=Gene;gene=ssaE;gene_biotype=protein_coding;locus_tag=PUW31_08770 CP118128.1 Protein Homology CDS 1785498 1785740 . - 0 ID=cds-WJH10186.1;Parent=gene-PUW31_08770;Dbxref=NCBI_GP:WJH10186.1;Name=WJH10186.1;gbkey=CDS;gene=ssaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460361.1;locus_tag=PUW31_08770;product=YscE family type III secretion system co-chaperone SsaE;protein_id=WJH10186.1;transl_table=11 CP118128.1 Genbank gene 1785748 1786959 . - . ID=gene-PUW31_08775;Name=ssaD;gbkey=Gene;gene=ssaD;gene_biotype=protein_coding;locus_tag=PUW31_08775 CP118128.1 Protein Homology CDS 1785748 1786959 . - 0 ID=cds-WJH10187.1;Parent=gene-PUW31_08775;Dbxref=NCBI_GP:WJH10187.1;Name=WJH10187.1;gbkey=CDS;gene=ssaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460360.1;locus_tag=PUW31_08775;product=SctD family type III secretion system inner membrane ring subunit SsaD;protein_id=WJH10187.1;transl_table=11 CP118128.1 Genbank gene 1786940 1788433 . - . ID=gene-PUW31_08780;Name=spiA;gbkey=Gene;gene=spiA;gene_biotype=protein_coding;locus_tag=PUW31_08780 CP118128.1 Protein Homology CDS 1786940 1788433 . - 0 ID=cds-WJH10188.1;Parent=gene-PUW31_08780;Dbxref=NCBI_GP:WJH10188.1;Name=WJH10188.1;gbkey=CDS;gene=spiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460359.1;locus_tag=PUW31_08780;product=SPI-2 type III secretion system protein SpiA;protein_id=WJH10188.1;transl_table=11 CP118128.1 Genbank gene 1788435 1788836 . - . ID=gene-PUW31_08785;Name=spiC;gbkey=Gene;gene=spiC;gene_biotype=protein_coding;locus_tag=PUW31_08785 CP118128.1 Protein Homology CDS 1788435 1788836 . - 0 ID=cds-WJH10189.1;Parent=gene-PUW31_08785;Dbxref=NCBI_GP:WJH10189.1;Name=WJH10189.1;gbkey=CDS;gene=spiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460358.1;locus_tag=PUW31_08785;product=SPI-2 type III secretion system protein SpiC;protein_id=WJH10189.1;transl_table=11 CP118128.1 Genbank gene 1789237 1791999 . + . ID=gene-PUW31_08790;Name=PUW31_08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08790 CP118128.1 Protein Homology CDS 1789237 1791999 . + 0 ID=cds-WJH10190.1;Parent=gene-PUW31_08790;Dbxref=NCBI_GP:WJH10190.1;Name=WJH10190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460357.1;locus_tag=PUW31_08790;product=two component system sensor kinase;protein_id=WJH10190.1;transl_table=11 CP118128.1 Genbank gene 1792030 1792668 . + . ID=gene-PUW31_08795;Name=PUW31_08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08795 CP118128.1 Protein Homology CDS 1792030 1792668 . + 0 ID=cds-WJH10191.1;Parent=gene-PUW31_08795;Dbxref=NCBI_GP:WJH10191.1;Name=WJH10191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460356.1;locus_tag=PUW31_08795;product=two component system response regulator;protein_id=WJH10191.1;transl_table=11 CP118128.1 Genbank gene 1792847 1793575 . + . ID=gene-PUW31_08800;Name=PUW31_08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08800 CP118128.1 Protein Homology CDS 1792847 1793575 . + 0 ID=cds-WJH10192.1;Parent=gene-PUW31_08800;Dbxref=NCBI_GP:WJH10192.1;Name=WJH10192.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460355.1;locus_tag=PUW31_08800;product=MerR family transcriptional regulator;protein_id=WJH10192.1;transl_table=11 CP118128.1 Genbank gene 1793748 1794707 . + . ID=gene-PUW31_08805;Name=mlrB;gbkey=Gene;gene=mlrB;gene_biotype=protein_coding;locus_tag=PUW31_08805 CP118128.1 Protein Homology CDS 1793748 1794707 . + 0 ID=cds-WJH10193.1;Parent=gene-PUW31_08805;Dbxref=NCBI_GP:WJH10193.1;Name=WJH10193.1;gbkey=CDS;gene=mlrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460354.1;locus_tag=PUW31_08805;product=transcriptional regulator MlrB;protein_id=WJH10193.1;transl_table=11 CP118128.1 Genbank gene 1794829 1795041 . - . ID=gene-PUW31_08810;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=PUW31_08810 CP118128.1 Protein Homology CDS 1794829 1795041 . - 0 ID=cds-WJH10194.1;Parent=gene-PUW31_08810;Dbxref=NCBI_GP:WJH10194.1;Name=WJH10194.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460353.1;locus_tag=PUW31_08810;product=fumarate hydratase FumD;protein_id=WJH10194.1;transl_table=11 CP118128.1 Genbank gene 1795139 1795759 . - . ID=gene-PUW31_08815;Name=ttrR;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=PUW31_08815 CP118128.1 Protein Homology CDS 1795139 1795759 . - 0 ID=cds-WJH10195.1;Parent=gene-PUW31_08815;Dbxref=NCBI_GP:WJH10195.1;Name=WJH10195.1;gbkey=CDS;gene=ttrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460352.3;locus_tag=PUW31_08815;product=tetrathionate respiration response regulator TtrR;protein_id=WJH10195.1;transl_table=11 CP118128.1 Genbank gene 1795734 1797512 . - . ID=gene-PUW31_08820;Name=ttrS;gbkey=Gene;gene=ttrS;gene_biotype=protein_coding;locus_tag=PUW31_08820 CP118128.1 Protein Homology CDS 1795734 1797512 . - 0 ID=cds-WJH10196.1;Parent=gene-PUW31_08820;Dbxref=NCBI_GP:WJH10196.1;Name=WJH10196.1;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460351.1;locus_tag=PUW31_08820;product=tetrathionate respiration histidine kinase TtrS;protein_id=WJH10196.1;transl_table=11 CP118128.1 Genbank pseudogene 1797676 1798429 . + . ID=gene-PUW31_08825;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=pseudogene;locus_tag=PUW31_08825;pseudo=true CP118128.1 Protein Homology CDS 1797676 1798429 . + 0 ID=cds-PUW31_08825;Parent=gene-PUW31_08825;Note=frameshifted;gbkey=CDS;gene=ttrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460350.1;locus_tag=PUW31_08825;product=tetrathionate reductase subunit TtrB;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 1798430 1799448 . + . ID=gene-PUW31_08830;Name=ttrC;gbkey=Gene;gene=ttrC;gene_biotype=pseudogene;locus_tag=PUW31_08830;pseudo=true CP118128.1 Protein Homology CDS 1798430 1799448 . + 0 ID=cds-PUW31_08830;Parent=gene-PUW31_08830;Note=frameshifted;gbkey=CDS;gene=ttrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460349.1;locus_tag=PUW31_08830;product=tetrathionate reductase subunit TtrC;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1799441 1802503 . + . ID=gene-PUW31_08835;Name=ttrA;gbkey=Gene;gene=ttrA;gene_biotype=protein_coding;locus_tag=PUW31_08835 CP118128.1 Protein Homology CDS 1799441 1802503 . + 0 ID=cds-WJH10197.1;Parent=gene-PUW31_08835;Dbxref=NCBI_GP:WJH10197.1;Name=WJH10197.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;gene=ttrA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460348.1;locus_tag=PUW31_08835;product=tetrathionate reductase subunit TtrA;protein_id=WJH10197.1;transl_table=11 CP118128.1 Genbank gene 1802826 1804052 . + . ID=gene-PUW31_08840;Name=PUW31_08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08840 CP118128.1 Protein Homology CDS 1802826 1804052 . + 0 ID=cds-WJH10198.1;Parent=gene-PUW31_08840;Dbxref=NCBI_GP:WJH10198.1;Name=WJH10198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460347.1;locus_tag=PUW31_08840;product=PfkB family carbohydrate kinase;protein_id=WJH10198.1;transl_table=11 CP118128.1 Genbank pseudogene 1804064 1804801 . + . ID=gene-PUW31_08845;Name=PUW31_08845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_08845;pseudo=true CP118128.1 Protein Homology CDS 1804064 1804801 . + 0 ID=cds-PUW31_08845;Parent=gene-PUW31_08845;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460346.1;locus_tag=PUW31_08845;product=glutamine amidotransferase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1804861 1805754 . + . ID=gene-PUW31_08850;Name=PUW31_08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08850 CP118128.1 Protein Homology CDS 1804861 1805754 . + 0 ID=cds-WJH10199.1;Parent=gene-PUW31_08850;Dbxref=NCBI_GP:WJH10199.1;Name=WJH10199.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460345.1;locus_tag=PUW31_08850;product=proline iminopeptidase-family hydrolase;protein_id=WJH10199.1;transl_table=11 CP118128.1 Genbank gene 1805776 1807119 . + . ID=gene-PUW31_08855;Name=PUW31_08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08855 CP118128.1 Protein Homology CDS 1805776 1807119 . + 0 ID=cds-WJH10200.1;Parent=gene-PUW31_08855;Dbxref=NCBI_GP:WJH10200.1;Name=WJH10200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460344.1;locus_tag=PUW31_08855;product=APC family permease;protein_id=WJH10200.1;transl_table=11 CP118128.1 Genbank gene 1807521 1808933 . + . ID=gene-PUW31_08860;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=PUW31_08860 CP118128.1 Protein Homology CDS 1807521 1808933 . + 0 ID=cds-WJH10201.1;Parent=gene-PUW31_08860;Dbxref=NCBI_GP:WJH10201.1;Name=WJH10201.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=PUW31_08860;product=pyruvate kinase PykF;protein_id=WJH10201.1;transl_table=11 CP118128.1 Genbank gene 1809243 1809479 . + . ID=gene-PUW31_08865;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=PUW31_08865 CP118128.1 Protein Homology CDS 1809243 1809479 . + 0 ID=cds-WJH10202.1;Parent=gene-PUW31_08865;Dbxref=NCBI_GP:WJH10202.1;Name=WJH10202.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460342.1;locus_tag=PUW31_08865;product=murein lipoprotein Lpp;protein_id=WJH10202.1;transl_table=11 CP118128.1 Genbank gene 1809562 1809804 . + . ID=gene-PUW31_08870;Name=PUW31_08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08870 CP118128.1 Protein Homology CDS 1809562 1809804 . + 0 ID=cds-WJH10703.1;Parent=gene-PUW31_08870;Dbxref=NCBI_GP:WJH10703.1;Name=WJH10703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082333.1;locus_tag=PUW31_08870;product=major outer membrane lipoprotein;protein_id=WJH10703.1;transl_table=11 CP118128.1 Genbank pseudogene 1809870 1810871 . - . ID=gene-PUW31_08875;Name=PUW31_08875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_08875;pseudo=true CP118128.1 Protein Homology CDS 1809870 1810871 . - 0 ID=cds-PUW31_08875;Parent=gene-PUW31_08875;Note=internal stop;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460340.1;locus_tag=PUW31_08875;product=L%2CD-transpeptidase family protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1811026 1811442 . - . ID=gene-PUW31_08880;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=PUW31_08880 CP118128.1 Protein Homology CDS 1811026 1811442 . - 0 ID=cds-WJH10203.1;Parent=gene-PUW31_08880;Dbxref=NCBI_GP:WJH10203.1;Name=WJH10203.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460339.1;locus_tag=PUW31_08880;product=cysteine desulfuration protein SufE;protein_id=WJH10203.1;transl_table=11 CP118128.1 Genbank gene 1811455 1812675 . - . ID=gene-PUW31_08885;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=PUW31_08885 CP118128.1 Protein Homology CDS 1811455 1812675 . - 0 ID=cds-WJH10204.1;Parent=gene-PUW31_08885;Dbxref=NCBI_GP:WJH10204.1;Name=WJH10204.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460338.1;locus_tag=PUW31_08885;product=cysteine desulfurase SufS;protein_id=WJH10204.1;transl_table=11 CP118128.1 Genbank gene 1812672 1813943 . - . ID=gene-PUW31_08890;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=PUW31_08890 CP118128.1 Protein Homology CDS 1812672 1813943 . - 0 ID=cds-WJH10205.1;Parent=gene-PUW31_08890;Dbxref=NCBI_GP:WJH10205.1;Name=WJH10205.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460337.1;locus_tag=PUW31_08890;product=Fe-S cluster assembly protein SufD;protein_id=WJH10205.1;transl_table=11 CP118128.1 Genbank gene 1813918 1814664 . - . ID=gene-PUW31_08895;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=PUW31_08895 CP118128.1 Protein Homology CDS 1813918 1814664 . - 0 ID=cds-WJH10206.1;Parent=gene-PUW31_08895;Dbxref=NCBI_GP:WJH10206.1;Name=WJH10206.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=PUW31_08895;product=Fe-S cluster assembly ATPase SufC;protein_id=WJH10206.1;transl_table=11 CP118128.1 Genbank gene 1814681 1816168 . - . ID=gene-PUW31_08900;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=PUW31_08900 CP118128.1 Protein Homology CDS 1814681 1816168 . - 0 ID=cds-WJH10207.1;Parent=gene-PUW31_08900;Dbxref=NCBI_GP:WJH10207.1;Name=WJH10207.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=PUW31_08900;product=Fe-S cluster assembly protein SufB;protein_id=WJH10207.1;transl_table=11 CP118128.1 Genbank gene 1816177 1816545 . - . ID=gene-PUW31_08905;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=PUW31_08905 CP118128.1 Protein Homology CDS 1816177 1816545 . - 0 ID=cds-WJH10208.1;Parent=gene-PUW31_08905;Dbxref=NCBI_GP:WJH10208.1;Name=WJH10208.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460334.1;locus_tag=PUW31_08905;product=Fe-S cluster assembly scaffold SufA;protein_id=WJH10208.1;transl_table=11 CP118128.1 Genbank gene 1816972 1818318 . + . ID=gene-PUW31_08910;Name=PUW31_08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08910 CP118128.1 Protein Homology CDS 1816972 1818318 . + 0 ID=cds-WJH10209.1;Parent=gene-PUW31_08910;Dbxref=NCBI_GP:WJH10209.1;Name=WJH10209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460333.1;locus_tag=PUW31_08910;product=L-cystine transporter;protein_id=WJH10209.1;transl_table=11 CP118128.1 Genbank gene 1818606 1818794 . - . ID=gene-PUW31_08915;Name=PUW31_08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08915 CP118128.1 Protein Homology CDS 1818606 1818794 . - 0 ID=cds-WJH10210.1;Parent=gene-PUW31_08915;Dbxref=NCBI_GP:WJH10210.1;Name=WJH10210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=PUW31_08915;product=YdiH family protein;protein_id=WJH10210.1;transl_table=11 CP118128.1 Genbank gene 1818893 1819303 . - . ID=gene-PUW31_08920;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=PUW31_08920 CP118128.1 Protein Homology CDS 1818893 1819303 . - 0 ID=cds-WJH10211.1;Parent=gene-PUW31_08920;Dbxref=NCBI_GP:WJH10211.1;Name=WJH10211.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460331.1;locus_tag=PUW31_08920;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WJH10211.1;transl_table=11 CP118128.1 Genbank gene 1819300 1822356 . - . ID=gene-PUW31_08925;Name=PUW31_08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08925 CP118128.1 Protein Homology CDS 1819300 1822356 . - 0 ID=cds-WJH10212.1;Parent=gene-PUW31_08925;Dbxref=NCBI_GP:WJH10212.1;Name=WJH10212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460330.1;locus_tag=PUW31_08925;product=FAD-binding and (Fe-S)-binding domain-containing protein;protein_id=WJH10212.1;transl_table=11 CP118128.1 Genbank gene 1822621 1823739 . + . ID=gene-PUW31_08930;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=PUW31_08930 CP118128.1 Protein Homology CDS 1822621 1823739 . + 0 ID=cds-WJH10213.1;Parent=gene-PUW31_08930;Dbxref=NCBI_GP:WJH10213.1;Name=WJH10213.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460329.1;locus_tag=PUW31_08930;product=AI-2E family transporter YdiK;protein_id=WJH10213.1;transl_table=11 CP118128.1 Genbank gene 1823922 1824029 . + . ID=gene-PUW31_08935;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=PUW31_08935 CP118128.1 cmsearch antisense_RNA 1823922 1824029 . + . ID=rna-PUW31_08935;Parent=gene-PUW31_08935;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_08935;product=antisense sRNA RprA CP118128.1 cmsearch exon 1823922 1824029 . + . ID=exon-PUW31_08935-1;Parent=rna-PUW31_08935;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_08935;product=antisense sRNA RprA CP118128.1 Genbank gene 1824197 1824556 . + . ID=gene-PUW31_08940;Name=PUW31_08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08940 CP118128.1 Protein Homology CDS 1824197 1824556 . + 0 ID=cds-WJH10214.1;Parent=gene-PUW31_08940;Dbxref=NCBI_GP:WJH10214.1;Name=WJH10214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460328.1;locus_tag=PUW31_08940;product=YdiL family protein;protein_id=WJH10214.1;transl_table=11 CP118128.1 Genbank gene 1824697 1825908 . + . ID=gene-PUW31_08945;Name=PUW31_08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08945 CP118128.1 Protein Homology CDS 1824697 1825908 . + 0 ID=cds-WJH10215.1;Parent=gene-PUW31_08945;Dbxref=NCBI_GP:WJH10215.1;Name=WJH10215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460327.1;locus_tag=PUW31_08945;product=MFS transporter;protein_id=WJH10215.1;transl_table=11 CP118128.1 Genbank gene 1826272 1827507 . + . ID=gene-PUW31_08950;Name=PUW31_08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08950 CP118128.1 Protein Homology CDS 1826272 1827507 . + 0 ID=cds-WJH10216.1;Parent=gene-PUW31_08950;Dbxref=NCBI_GP:WJH10216.1;Name=WJH10216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460326.1;locus_tag=PUW31_08950;product=MFS transporter;protein_id=WJH10216.1;transl_table=11 CP118128.1 Genbank pseudogene 1827574 1828439 . + . ID=gene-PUW31_08955;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=pseudogene;locus_tag=PUW31_08955;pseudo=true CP118128.1 Protein Homology CDS 1827574 1828439 . + 0 ID=cds-PUW31_08955;Parent=gene-PUW31_08955;Note=frameshifted;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460325.1;locus_tag=PUW31_08955;product=quinate/shikimate dehydrogenase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1828484 1829242 . + . ID=gene-PUW31_08960;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=PUW31_08960 CP118128.1 Protein Homology CDS 1828484 1829242 . + 0 ID=cds-WJH10217.1;Parent=gene-PUW31_08960;Dbxref=NCBI_GP:WJH10217.1;Name=WJH10217.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460324.1;locus_tag=PUW31_08960;product=type I 3-dehydroquinate dehydratase;protein_id=WJH10217.1;transl_table=11 CP118128.1 Genbank gene 1829396 1830991 . + . ID=gene-PUW31_08965;Name=PUW31_08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08965 CP118128.1 Protein Homology CDS 1829396 1830991 . + 0 ID=cds-WJH10218.1;Parent=gene-PUW31_08965;Dbxref=NCBI_GP:WJH10218.1;Name=WJH10218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=PUW31_08965;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WJH10218.1;transl_table=11 CP118128.1 Genbank gene 1831005 1832156 . + . ID=gene-PUW31_08970;Name=PUW31_08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08970 CP118128.1 Protein Homology CDS 1831005 1832156 . + 0 ID=cds-WJH10219.1;Parent=gene-PUW31_08970;Dbxref=NCBI_GP:WJH10219.1;Name=WJH10219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460322.1;locus_tag=PUW31_08970;product=acyl-CoA dehydrogenase;protein_id=WJH10219.1;transl_table=11 CP118128.1 Genbank gene 1832232 1833122 . - . ID=gene-PUW31_08975;Name=PUW31_08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08975 CP118128.1 Protein Homology CDS 1832232 1833122 . - 0 ID=cds-WJH10220.1;Parent=gene-PUW31_08975;Dbxref=NCBI_GP:WJH10220.1;Name=WJH10220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460321.1;locus_tag=PUW31_08975;product=AraC family transcriptional regulator;protein_id=WJH10220.1;transl_table=11 CP118128.1 Genbank pseudogene 1833585 1834349 . + . ID=gene-PUW31_08980;Name=PUW31_08980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_08980;pseudo=true CP118128.1 Protein Homology CDS 1833585 1834349 . + 0 ID=cds-PUW31_08980;Parent=gene-PUW31_08980;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460320.1;locus_tag=PUW31_08980;product=electron transfer flavoprotein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1834371 1835306 . + . ID=gene-PUW31_08985;Name=PUW31_08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08985 CP118128.1 Protein Homology CDS 1834371 1835306 . + 0 ID=cds-WJH10221.1;Parent=gene-PUW31_08985;Dbxref=NCBI_GP:WJH10221.1;Name=WJH10221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460319.1;locus_tag=PUW31_08985;product=electron transfer flavoprotein subunit alpha;protein_id=WJH10221.1;transl_table=11 CP118128.1 Genbank gene 1835363 1836646 . + . ID=gene-PUW31_08990;Name=PUW31_08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08990 CP118128.1 Protein Homology CDS 1835363 1836646 . + 0 ID=cds-WJH10222.1;Parent=gene-PUW31_08990;Dbxref=NCBI_GP:WJH10222.1;Name=WJH10222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460318.1;locus_tag=PUW31_08990;product=FAD-dependent oxidoreductase;protein_id=WJH10222.1;transl_table=11 CP118128.1 Genbank gene 1836643 1836936 . + . ID=gene-PUW31_08995;Name=PUW31_08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_08995 CP118128.1 Protein Homology CDS 1836643 1836936 . + 0 ID=cds-WJH10223.1;Parent=gene-PUW31_08995;Dbxref=NCBI_GP:WJH10223.1;Name=WJH10223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460317.1;locus_tag=PUW31_08995;product=ferredoxin family protein;protein_id=WJH10223.1;transl_table=11 CP118128.1 Genbank gene 1837174 1838814 . + . ID=gene-PUW31_09000;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=PUW31_09000 CP118128.1 Protein Homology CDS 1837174 1838814 . + 0 ID=cds-WJH10224.1;Parent=gene-PUW31_09000;Dbxref=NCBI_GP:WJH10224.1;Name=WJH10224.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460316.1;locus_tag=PUW31_09000;product=medium-chain fatty-acid--CoA ligase;protein_id=WJH10224.1;transl_table=11 CP118128.1 Genbank gene 1838856 1841234 . - . ID=gene-PUW31_09005;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=PUW31_09005 CP118128.1 Protein Homology CDS 1838856 1841234 . - 0 ID=cds-WJH10225.1;Parent=gene-PUW31_09005;Dbxref=NCBI_GP:WJH10225.1;Name=WJH10225.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460315.1;locus_tag=PUW31_09005;product=phosphoenolpyruvate synthase;protein_id=WJH10225.1;transl_table=11 CP118128.1 Genbank gene 1841570 1842403 . + . ID=gene-PUW31_09010;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=PUW31_09010 CP118128.1 Protein Homology CDS 1841570 1842403 . + 0 ID=cds-WJH10226.1;Parent=gene-PUW31_09010;Dbxref=NCBI_GP:WJH10226.1;Name=WJH10226.1;gbkey=CDS;gene=ppsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460314.1;locus_tag=PUW31_09010;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WJH10226.1;transl_table=11 CP118128.1 Genbank gene 1842559 1843605 . + . ID=gene-PUW31_09015;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=PUW31_09015 CP118128.1 Protein Homology CDS 1842559 1843605 . + 0 ID=cds-WJH10227.1;Parent=gene-PUW31_09015;Dbxref=NCBI_GP:WJH10227.1;Name=WJH10227.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460313.1;locus_tag=PUW31_09015;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WJH10227.1;transl_table=11 CP118128.1 Genbank gene 1843762 1843953 . + . ID=gene-PUW31_09020;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=PUW31_09020 CP118128.1 Protein Homology CDS 1843762 1843953 . + 0 ID=cds-WJH10704.1;Parent=gene-PUW31_09020;Dbxref=NCBI_GP:WJH10704.1;Name=WJH10704.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460312.1;locus_tag=PUW31_09020;product=hemin uptake protein HemP;protein_id=WJH10704.1;transl_table=11 CP118128.1 Genbank pseudogene 1843988 1845422 . - . ID=gene-PUW31_09025;Name=selO;gbkey=Gene;gene=selO;gene_biotype=pseudogene;locus_tag=PUW31_09025;pseudo=true CP118128.1 Protein Homology CDS 1843988 1845422 . - 0 ID=cds-PUW31_09025;Parent=gene-PUW31_09025;Note=frameshifted;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,protein adenylyltransferase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460311.1;locus_tag=PUW31_09025;product=protein adenylyltransferase SelO;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1845473 1846186 . - . ID=gene-PUW31_09030;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=PUW31_09030 CP118128.1 Protein Homology CDS 1845473 1846186 . - 0 ID=cds-WJH10228.1;Parent=gene-PUW31_09030;Dbxref=NCBI_GP:WJH10228.1;Name=WJH10228.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460310.1;locus_tag=PUW31_09030;product=anti-FlhDC factor YdiV;protein_id=WJH10228.1;transl_table=11 CP118128.1 Genbank gene 1846500 1846964 . - . ID=gene-PUW31_09035;Name=PUW31_09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09035 CP118128.1 Protein Homology CDS 1846500 1846964 . - 0 ID=cds-WJH10229.1;Parent=gene-PUW31_09035;Dbxref=NCBI_GP:WJH10229.1;Name=WJH10229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460309.1;locus_tag=PUW31_09035;product=NlpC/P60 family protein;protein_id=WJH10229.1;transl_table=11 CP118128.1 Genbank gene 1847041 1847790 . - . ID=gene-PUW31_09040;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=PUW31_09040 CP118128.1 Protein Homology CDS 1847041 1847790 . - 0 ID=cds-WJH10230.1;Parent=gene-PUW31_09040;Dbxref=NCBI_GP:WJH10230.1;Name=WJH10230.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460308.1;locus_tag=PUW31_09040;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WJH10230.1;transl_table=11 CP118128.1 Genbank pseudogene 1847790 1848340 . - . ID=gene-PUW31_09045;Name=PUW31_09045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_09045;pseudo=true CP118128.1 Protein Homology CDS 1847790 1848340 . - 0 ID=cds-PUW31_09045;Parent=gene-PUW31_09045;Note=frameshifted;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460307.1;locus_tag=PUW31_09045;product=glutathione peroxidase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1848432 1849412 . - . ID=gene-PUW31_09050;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=PUW31_09050 CP118128.1 Protein Homology CDS 1848432 1849412 . - 0 ID=cds-WJH10231.1;Parent=gene-PUW31_09050;Dbxref=NCBI_GP:WJH10231.1;Name=WJH10231.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460306.1;locus_tag=PUW31_09050;product=vitamin B12 ABC transporter permease BtuC;protein_id=WJH10231.1;transl_table=11 CP118128.1 Genbank gene 1849615 1849914 . - . ID=gene-PUW31_09055;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=PUW31_09055 CP118128.1 Protein Homology CDS 1849615 1849914 . - 0 ID=cds-WJH10232.1;Parent=gene-PUW31_09055;Dbxref=NCBI_GP:WJH10232.1;Name=WJH10232.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460305.1;locus_tag=PUW31_09055;product=integration host factor subunit alpha;protein_id=WJH10232.1;transl_table=11 CP118128.1 Genbank gene 1849919 1852306 . - . ID=gene-PUW31_09060;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=PUW31_09060 CP118128.1 Protein Homology CDS 1849919 1852306 . - 0 ID=cds-WJH10233.1;Parent=gene-PUW31_09060;Dbxref=NCBI_GP:WJH10233.1;Name=WJH10233.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460304.1;locus_tag=PUW31_09060;product=phenylalanine--tRNA ligase subunit beta;protein_id=WJH10233.1;transl_table=11 CP118128.1 Genbank gene 1852322 1853305 . - . ID=gene-PUW31_09065;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=PUW31_09065 CP118128.1 Protein Homology CDS 1852322 1853305 . - 0 ID=cds-WJH10234.1;Parent=gene-PUW31_09065;Dbxref=NCBI_GP:WJH10234.1;Name=WJH10234.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=PUW31_09065;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WJH10234.1;transl_table=11 CP118128.1 cmsearch sequence_feature 1853368 1853491 . - . ID=id-CP118128.1:1853368..1853491;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 CP118128.1 Genbank gene 1853442 1853486 . - . ID=gene-PUW31_09070;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=PUW31_09070 CP118128.1 Protein Homology CDS 1853442 1853486 . - 0 ID=cds-WJH10705.1;Parent=gene-PUW31_09070;Dbxref=NCBI_GP:WJH10705.1;Name=WJH10705.1;gbkey=CDS;gene=pheM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=PUW31_09070;product=pheST operon leader peptide PheM;protein_id=WJH10705.1;transl_table=11 CP118128.1 Genbank gene 1853607 1853963 . - . ID=gene-PUW31_09075;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=PUW31_09075 CP118128.1 Protein Homology CDS 1853607 1853963 . - 0 ID=cds-WJH10235.1;Parent=gene-PUW31_09075;Dbxref=NCBI_GP:WJH10235.1;Name=WJH10235.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=PUW31_09075;product=50S ribosomal protein L20;protein_id=WJH10235.1;transl_table=11 CP118128.1 Genbank gene 1854014 1854211 . - . ID=gene-PUW31_09080;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=PUW31_09080 CP118128.1 Protein Homology CDS 1854014 1854211 . - 0 ID=cds-WJH10236.1;Parent=gene-PUW31_09080;Dbxref=NCBI_GP:WJH10236.1;Name=WJH10236.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=PUW31_09080;product=50S ribosomal protein L35;protein_id=WJH10236.1;transl_table=11 CP118128.1 Genbank gene 1854307 1854849 . - . ID=gene-PUW31_09085;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=PUW31_09085 CP118128.1 Protein Homology CDS 1854307 1854849 . - 0 ID=cds-WJH10706.1;Parent=gene-PUW31_09085;Dbxref=NCBI_GP:WJH10706.1;Name=WJH10706.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=PUW31_09085;product=translation initiation factor IF-3;protein_id=WJH10706.1;transl_table=11 CP118128.1 Genbank gene 1854853 1856781 . - . ID=gene-PUW31_09090;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=PUW31_09090 CP118128.1 Protein Homology CDS 1854853 1856781 . - 0 ID=cds-WJH10237.1;Parent=gene-PUW31_09090;Dbxref=NCBI_GP:WJH10237.1;Name=WJH10237.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=PUW31_09090;product=threonine--tRNA ligase;protein_id=WJH10237.1;transl_table=11 CP118128.1 Genbank gene 1857692 1858915 . + . ID=gene-PUW31_09095;Name=PUW31_09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09095 CP118128.1 Protein Homology CDS 1857692 1858915 . + 0 ID=cds-WJH10238.1;Parent=gene-PUW31_09095;Dbxref=NCBI_GP:WJH10238.1;Name=WJH10238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460298.1;locus_tag=PUW31_09095;product=O-antigen polymerase;protein_id=WJH10238.1;transl_table=11 CP118128.1 Genbank pseudogene 1859222 1859427 . - . ID=gene-PUW31_09100;Name=PUW31_09100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_09100;pseudo=true CP118128.1 Protein Homology CDS 1859222 1859427 . - 0 ID=cds-PUW31_09100;Parent=gene-PUW31_09100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447756.1;locus_tag=PUW31_09100;product=hypothetical protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1859600 1860454 . - . ID=gene-PUW31_09105;Name=PUW31_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09105 CP118128.1 Protein Homology CDS 1859600 1860454 . - 0 ID=cds-WJH10239.1;Parent=gene-PUW31_09105;Dbxref=NCBI_GP:WJH10239.1;Name=WJH10239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460296.1;locus_tag=PUW31_09105;product=DNA/RNA non-specific endonuclease;protein_id=WJH10239.1;transl_table=11 CP118128.1 Genbank pseudogene 1860475 1860764 . - . ID=gene-PUW31_09110;Name=PUW31_09110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_09110;pseudo=true CP118128.1 Protein Homology CDS 1860475 1860764 . - 0 ID=cds-PUW31_09110;Parent=gene-PUW31_09110;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460295.1;locus_tag=PUW31_09110;product=hypothetical protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1860907 1861866 . + . ID=gene-PUW31_09115;Name=PUW31_09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09115 CP118128.1 Protein Homology CDS 1860907 1861866 . + 0 ID=cds-WJH10240.1;Parent=gene-PUW31_09115;Dbxref=NCBI_GP:WJH10240.1;Name=WJH10240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460294.1;locus_tag=PUW31_09115;product=lipid A deacylase LpxR family protein;protein_id=WJH10240.1;transl_table=11 CP118128.1 Genbank gene 1861915 1862673 . - . ID=gene-PUW31_09120;Name=PUW31_09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09120 CP118128.1 Protein Homology CDS 1861915 1862673 . - 0 ID=cds-WJH10241.1;Parent=gene-PUW31_09120;Dbxref=NCBI_GP:WJH10241.1;Name=WJH10241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460293.1;locus_tag=PUW31_09120;product=YdiY family protein;protein_id=WJH10241.1;transl_table=11 CP118128.1 Genbank gene 1862962 1863894 . + . ID=gene-PUW31_09125;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=PUW31_09125 CP118128.1 Protein Homology CDS 1862962 1863894 . + 0 ID=cds-WJH10242.1;Parent=gene-PUW31_09125;Dbxref=NCBI_GP:WJH10242.1;Name=WJH10242.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460292.1;locus_tag=PUW31_09125;product=6-phosphofructokinase II;protein_id=WJH10242.1;transl_table=11 CP118128.1 Genbank gene 1863990 1864280 . + . ID=gene-PUW31_09130;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=PUW31_09130 CP118128.1 Protein Homology CDS 1863990 1864280 . + 0 ID=cds-WJH10243.1;Parent=gene-PUW31_09130;Dbxref=NCBI_GP:WJH10243.1;Name=WJH10243.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=endoribonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460291.1;locus_tag=PUW31_09130;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WJH10243.1;transl_table=11 CP118128.1 Genbank gene 1864387 1865247 . + . ID=gene-PUW31_09135;Name=PUW31_09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09135 CP118128.1 Protein Homology CDS 1864387 1865247 . + 0 ID=cds-WJH10244.1;Parent=gene-PUW31_09135;Dbxref=NCBI_GP:WJH10244.1;Name=WJH10244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460290.1;locus_tag=PUW31_09135;product=fructosamine kinase family protein;protein_id=WJH10244.1;transl_table=11 CP118128.1 Genbank gene 1865290 1865826 . - . ID=gene-PUW31_09140;Name=PUW31_09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09140 CP118128.1 Protein Homology CDS 1865290 1865826 . - 0 ID=cds-WJH10245.1;Parent=gene-PUW31_09140;Dbxref=NCBI_GP:WJH10245.1;Name=WJH10245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460289.1;locus_tag=PUW31_09140;product=YniB family protein;protein_id=WJH10245.1;transl_table=11 CP118128.1 Genbank gene 1865975 1866643 . + . ID=gene-PUW31_09145;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=PUW31_09145 CP118128.1 Protein Homology CDS 1865975 1866643 . + 0 ID=cds-WJH10246.1;Parent=gene-PUW31_09145;Dbxref=NCBI_GP:WJH10246.1;Name=WJH10246.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460288.1;locus_tag=PUW31_09145;product=hexitol phosphatase HxpB;protein_id=WJH10246.1;transl_table=11 CP118128.1 Genbank gene 1866781 1867380 . + . ID=gene-PUW31_09150;Name=PUW31_09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09150 CP118128.1 Protein Homology CDS 1866781 1867380 . + 0 ID=cds-WJH10247.1;Parent=gene-PUW31_09150;Dbxref=NCBI_GP:WJH10247.1;Name=WJH10247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460287.3;locus_tag=PUW31_09150;product=metal-dependent hydrolase;protein_id=WJH10247.1;transl_table=11 CP118128.1 Genbank gene 1867517 1868908 . + . ID=gene-PUW31_09155;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=PUW31_09155 CP118128.1 Protein Homology CDS 1867517 1868908 . + 0 ID=cds-WJH10248.1;Parent=gene-PUW31_09155;Dbxref=NCBI_GP:WJH10248.1;Name=WJH10248.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=PUW31_09155;product=cystine/sulfocysteine:cation symporter;protein_id=WJH10248.1;transl_table=11 CP118128.1 Genbank gene 1869010 1869252 . - . ID=gene-PUW31_09160;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=PUW31_09160 CP118128.1 Protein Homology CDS 1869010 1869252 . - 0 ID=cds-WJH10249.1;Parent=gene-PUW31_09160;Dbxref=NCBI_GP:WJH10249.1;Name=WJH10249.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460285.1;locus_tag=PUW31_09160;product=cell division activator CedA;protein_id=WJH10249.1;transl_table=11 CP118128.1 Genbank gene 1869617 1871869 . + . ID=gene-PUW31_09165;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=PUW31_09165 CP118128.1 Protein Homology CDS 1869617 1871869 . + 0 ID=cds-WJH10250.1;Parent=gene-PUW31_09165;Dbxref=NCBI_GP:WJH10250.1;Name=WJH10250.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460284.1;locus_tag=PUW31_09165;product=catalase HPII;protein_id=WJH10250.1;transl_table=11 CP118128.1 Genbank gene 1871913 1872671 . - . ID=gene-PUW31_09170;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=PUW31_09170 CP118128.1 Protein Homology CDS 1871913 1872671 . - 0 ID=cds-WJH10251.1;Parent=gene-PUW31_09170;Dbxref=NCBI_GP:WJH10251.1;Name=WJH10251.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460283.1;locus_tag=PUW31_09170;product=chitin disaccharide deacetylase;protein_id=WJH10251.1;transl_table=11 CP118128.1 Genbank gene 1872684 1874039 . - . ID=gene-PUW31_09175;Name=PUW31_09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09175 CP118128.1 Protein Homology CDS 1872684 1874039 . - 0 ID=cds-WJH10252.1;Parent=gene-PUW31_09175;Dbxref=NCBI_GP:WJH10252.1;Name=WJH10252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460282.1;locus_tag=PUW31_09175;product=6-phospho-beta-glucosidase;protein_id=WJH10252.1;transl_table=11 CP118128.1 Genbank gene 1874164 1875006 . - . ID=gene-PUW31_09180;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=PUW31_09180 CP118128.1 Protein Homology CDS 1874164 1875006 . - 0 ID=cds-WJH10253.1;Parent=gene-PUW31_09180;Dbxref=NCBI_GP:WJH10253.1;Name=WJH10253.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460281.1;locus_tag=PUW31_09180;product=transcriptional regulator ChbR;protein_id=WJH10253.1;transl_table=11 CP118128.1 Genbank gene 1875017 1875364 . - . ID=gene-PUW31_09185;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=PUW31_09185 CP118128.1 Protein Homology CDS 1875017 1875364 . - 0 ID=cds-WJH10254.1;Parent=gene-PUW31_09185;Dbxref=NCBI_GP:WJH10254.1;Name=WJH10254.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460280.1;locus_tag=PUW31_09185;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WJH10254.1;transl_table=11 CP118128.1 Genbank gene 1875415 1876773 . - . ID=gene-PUW31_09190;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=PUW31_09190 CP118128.1 Protein Homology CDS 1875415 1876773 . - 0 ID=cds-WJH10255.1;Parent=gene-PUW31_09190;Dbxref=NCBI_GP:WJH10255.1;Name=WJH10255.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460279.1;locus_tag=PUW31_09190;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WJH10255.1;transl_table=11 CP118128.1 Genbank gene 1876856 1877176 . - . ID=gene-PUW31_09195;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=PUW31_09195 CP118128.1 Protein Homology CDS 1876856 1877176 . - 0 ID=cds-WJH10256.1;Parent=gene-PUW31_09195;Dbxref=NCBI_GP:WJH10256.1;Name=WJH10256.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460278.1;locus_tag=PUW31_09195;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WJH10256.1;transl_table=11 CP118128.1 Genbank gene 1877477 1877818 . - . ID=gene-PUW31_09200;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=PUW31_09200 CP118128.1 Protein Homology CDS 1877477 1877818 . - 0 ID=cds-WJH10257.1;Parent=gene-PUW31_09200;Dbxref=NCBI_GP:WJH10257.1;Name=WJH10257.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460277.1;locus_tag=PUW31_09200;product=osmotically-inducible lipoprotein OsmE;protein_id=WJH10257.1;transl_table=11 CP118128.1 Genbank gene 1878037 1878864 . + . ID=gene-PUW31_09205;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=PUW31_09205 CP118128.1 Protein Homology CDS 1878037 1878864 . + 0 ID=cds-WJH10258.1;Parent=gene-PUW31_09205;Dbxref=NCBI_GP:WJH10258.1;Name=WJH10258.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460276.1;locus_tag=PUW31_09205;product=ammonia-dependent NAD(+) synthetase;protein_id=WJH10258.1;transl_table=11 CP118128.1 Genbank gene 1878985 1879866 . + . ID=gene-PUW31_09210;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=PUW31_09210 CP118128.1 Protein Homology CDS 1878985 1879866 . + 0 ID=cds-WJH10259.1;Parent=gene-PUW31_09210;Dbxref=NCBI_GP:WJH10259.1;Name=WJH10259.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233065.1;locus_tag=PUW31_09210;product=excinuclease Cho;protein_id=WJH10259.1;transl_table=11 CP118128.1 Genbank gene 1879941 1880426 . - . ID=gene-PUW31_09215;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=PUW31_09215 CP118128.1 Protein Homology CDS 1879941 1880426 . - 0 ID=cds-WJH10260.1;Parent=gene-PUW31_09215;Dbxref=NCBI_GP:WJH10260.1;Name=WJH10260.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460274.1;locus_tag=PUW31_09215;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WJH10260.1;transl_table=11 CP118128.1 Genbank gene 1880762 1881730 . - . ID=gene-PUW31_09220;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=PUW31_09220 CP118128.1 Protein Homology CDS 1880762 1881730 . - 0 ID=cds-WJH10261.1;Parent=gene-PUW31_09220;Dbxref=NCBI_GP:WJH10261.1;Name=WJH10261.1;Ontology_term=GO:0006527,GO:0009017;gbkey=CDS;gene=astE;go_function=succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460273.1;locus_tag=PUW31_09220;product=succinylglutamate desuccinylase;protein_id=WJH10261.1;transl_table=11 CP118128.1 Genbank gene 1881723 1883066 . - . ID=gene-PUW31_09225;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=PUW31_09225 CP118128.1 Protein Homology CDS 1881723 1883066 . - 0 ID=cds-WJH10262.1;Parent=gene-PUW31_09225;Dbxref=NCBI_GP:WJH10262.1;Name=WJH10262.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460272.1;locus_tag=PUW31_09225;product=N-succinylarginine dihydrolase;protein_id=WJH10262.1;transl_table=11 CP118128.1 Genbank gene 1883063 1884541 . - . ID=gene-PUW31_09230;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=PUW31_09230 CP118128.1 Protein Homology CDS 1883063 1884541 . - 0 ID=cds-WJH10263.1;Parent=gene-PUW31_09230;Dbxref=NCBI_GP:WJH10263.1;Name=WJH10263.1;Ontology_term=GO:0006527,GO:0016620;gbkey=CDS;gene=astD;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460271.1;locus_tag=PUW31_09230;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WJH10263.1;transl_table=11 CP118128.1 Genbank pseudogene 1884538 1884966 . - . ID=gene-PUW31_09235;Name=PUW31_09235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_09235;pseudo=true CP118128.1 Protein Homology CDS 1884538 1884966 . - 0 ID=cds-PUW31_09235;Parent=gene-PUW31_09235;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460270.1;locus_tag=PUW31_09235;product=arginine N-succinyltransferase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1884990 1886216 . - . ID=gene-PUW31_09240;Name=PUW31_09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09240 CP118128.1 Protein Homology CDS 1884990 1886216 . - 0 ID=cds-WJH10264.1;Parent=gene-PUW31_09240;Dbxref=NCBI_GP:WJH10264.1;Name=WJH10264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460269.1;locus_tag=PUW31_09240;product=aspartate aminotransferase family protein;protein_id=WJH10264.1;transl_table=11 CP118128.1 Genbank gene 1886662 1887468 . + . ID=gene-PUW31_09245;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=PUW31_09245 CP118128.1 Protein Homology CDS 1886662 1887468 . + 0 ID=cds-WJH10265.1;Parent=gene-PUW31_09245;Dbxref=NCBI_GP:WJH10265.1;Name=WJH10265.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008853;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,exodeoxyribonuclease III activity|0008853||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460268.1;locus_tag=PUW31_09245;product=exodeoxyribonuclease III;protein_id=WJH10265.1;transl_table=11 CP118128.1 Genbank gene 1887541 1887957 . + . ID=gene-PUW31_09250;Name=PUW31_09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09250 CP118128.1 Protein Homology CDS 1887541 1887957 . + 0 ID=cds-WJH10266.1;Parent=gene-PUW31_09250;Dbxref=NCBI_GP:WJH10266.1;Name=WJH10266.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460267.1;locus_tag=PUW31_09250;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=WJH10266.1;transl_table=11 CP118128.1 Genbank gene 1887917 1888192 . - . ID=gene-PUW31_09255;Name=PUW31_09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09255 CP118128.1 Protein Homology CDS 1887917 1888192 . - 0 ID=cds-WJH10267.1;Parent=gene-PUW31_09255;Dbxref=NCBI_GP:WJH10267.1;Name=WJH10267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465441.1;locus_tag=PUW31_09255;product=YnjH family protein;protein_id=WJH10267.1;transl_table=11 CP118128.1 Genbank pseudogene 1888431 1889774 . + . ID=gene-PUW31_09260;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=pseudogene;locus_tag=PUW31_09260;pseudo=true CP118128.1 Protein Homology CDS 1888431 1889774 . + 0 ID=cds-PUW31_09260;Parent=gene-PUW31_09260;Note=internal stop;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460265.1;locus_tag=PUW31_09260;product=NADP-specific glutamate dehydrogenase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 1889804 1891752 . - . ID=gene-PUW31_09265;Name=topB;gbkey=Gene;gene=topB;gene_biotype=pseudogene;locus_tag=PUW31_09265;pseudo=true CP118128.1 Protein Homology CDS 1889804 1891752 . - 0 ID=cds-PUW31_09265;Parent=gene-PUW31_09265;Note=frameshifted;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460264.1;locus_tag=PUW31_09265;product=DNA topoisomerase III;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1891757 1892800 . - . ID=gene-PUW31_09270;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=PUW31_09270 CP118128.1 Protein Homology CDS 1891757 1892800 . - 0 ID=cds-WJH10268.1;Parent=gene-PUW31_09270;Dbxref=NCBI_GP:WJH10268.1;Name=WJH10268.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460263.1;locus_tag=PUW31_09270;product=selenide%2C water dikinase SelD;protein_id=WJH10268.1;transl_table=11 CP118128.1 Genbank gene 1892918 1893469 . - . ID=gene-PUW31_09275;Name=PUW31_09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09275 CP118128.1 Protein Homology CDS 1892918 1893469 . - 0 ID=cds-WJH10269.1;Parent=gene-PUW31_09275;Dbxref=NCBI_GP:WJH10269.1;Name=WJH10269.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460262.1;locus_tag=PUW31_09275;product=NAD(P)H nitroreductase;protein_id=WJH10269.1;transl_table=11 CP118128.1 Genbank gene 1893643 1895499 . + . ID=gene-PUW31_09280;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=PUW31_09280 CP118128.1 Protein Homology CDS 1893643 1895499 . + 0 ID=cds-WJH10270.1;Parent=gene-PUW31_09280;Dbxref=NCBI_GP:WJH10270.1;Name=WJH10270.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460261.1;locus_tag=PUW31_09280;product=signal peptide peptidase SppA;protein_id=WJH10270.1;transl_table=11 CP118128.1 Genbank gene 1895595 1896611 . + . ID=gene-PUW31_09285;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=PUW31_09285 CP118128.1 Protein Homology CDS 1895595 1896611 . + 0 ID=cds-WJH10271.1;Parent=gene-PUW31_09285;Dbxref=NCBI_GP:WJH10271.1;Name=WJH10271.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460260.1;locus_tag=PUW31_09285;product=asparaginase;protein_id=WJH10271.1;transl_table=11 CP118128.1 Genbank gene 1896638 1897294 . + . ID=gene-PUW31_09290;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=PUW31_09290 CP118128.1 Protein Homology CDS 1896638 1897294 . + 0 ID=cds-WJH10272.1;Parent=gene-PUW31_09290;Dbxref=NCBI_GP:WJH10272.1;Name=WJH10272.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460259.1;locus_tag=PUW31_09290;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WJH10272.1;transl_table=11 CP118128.1 Genbank gene 1897397 1897798 . - . ID=gene-PUW31_09295;Name=PUW31_09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09295 CP118128.1 Protein Homology CDS 1897397 1897798 . - 0 ID=cds-WJH10707.1;Parent=gene-PUW31_09295;Dbxref=NCBI_GP:WJH10707.1;Name=WJH10707.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012312.2;locus_tag=PUW31_09295;product=MFS transporter;protein_id=WJH10707.1;transl_table=11 CP118128.1 Genbank gene 1897741 1898754 . - . ID=gene-PUW31_09300;Name=PUW31_09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09300 CP118128.1 Protein Homology CDS 1897741 1898754 . - 0 ID=cds-WJH10273.1;Parent=gene-PUW31_09300;Dbxref=NCBI_GP:WJH10273.1;Name=WJH10273.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=PUW31_09300;product=MFS transporter;protein_id=WJH10273.1;transl_table=11 CP118128.1 Genbank gene 1898890 1899648 . - . ID=gene-PUW31_09305;Name=PUW31_09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09305 CP118128.1 Protein Homology CDS 1898890 1899648 . - 0 ID=cds-WJH10274.1;Parent=gene-PUW31_09305;Dbxref=NCBI_GP:WJH10274.1;Name=WJH10274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226392.1;locus_tag=PUW31_09305;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WJH10274.1;transl_table=11 CP118128.1 Genbank gene 1899778 1900761 . - . ID=gene-PUW31_09310;Name=PUW31_09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09310 CP118128.1 Protein Homology CDS 1899778 1900761 . - 0 ID=cds-WJH10275.1;Parent=gene-PUW31_09310;Dbxref=NCBI_GP:WJH10275.1;Name=WJH10275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000782140.1;locus_tag=PUW31_09310;product=aldo/keto reductase;protein_id=WJH10275.1;transl_table=11 CP118128.1 Genbank pseudogene 1900771 1901717 . - . ID=gene-PUW31_09315;Name=PUW31_09315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_09315;pseudo=true CP118128.1 Protein Homology CDS 1900771 1901717 . - 0 ID=cds-PUW31_09315;Parent=gene-PUW31_09315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226390.1;locus_tag=PUW31_09315;product=sugar kinase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1901722 1902558 . - . ID=gene-PUW31_09320;Name=PUW31_09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09320 CP118128.1 Protein Homology CDS 1901722 1902558 . - 0 ID=cds-WJH10276.1;Parent=gene-PUW31_09320;Dbxref=NCBI_GP:WJH10276.1;Name=WJH10276.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416287.1;locus_tag=PUW31_09320;product=ketose-bisphosphate aldolase;protein_id=WJH10276.1;transl_table=11 CP118128.1 Genbank pseudogene 1902580 1903624 . - . ID=gene-PUW31_09325;Name=PUW31_09325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_09325;pseudo=true CP118128.1 Protein Homology CDS 1902580 1903624 . - 0 ID=cds-PUW31_09325;Parent=gene-PUW31_09325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416288.1;locus_tag=PUW31_09325;product=NAD(P)-dependent alcohol dehydrogenase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1903635 1905014 . - . ID=gene-PUW31_09330;Name=PUW31_09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09330 CP118128.1 Protein Homology CDS 1903635 1905014 . - 0 ID=cds-WJH10277.1;Parent=gene-PUW31_09330;Dbxref=NCBI_GP:WJH10277.1;Name=WJH10277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416289.1;locus_tag=PUW31_09330;product=MFS transporter;protein_id=WJH10277.1;transl_table=11 CP118128.1 Genbank gene 1905041 1906117 . - . ID=gene-PUW31_09335;Name=PUW31_09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09335 CP118128.1 Protein Homology CDS 1905041 1906117 . - 0 ID=cds-WJH10278.1;Parent=gene-PUW31_09335;Dbxref=NCBI_GP:WJH10278.1;Name=WJH10278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310512.1;locus_tag=PUW31_09335;product=zinc-binding dehydrogenase;protein_id=WJH10278.1;transl_table=11 CP118128.1 Genbank pseudogene 1906413 1906835 . + . ID=gene-PUW31_09340;Name=PUW31_09340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_09340;pseudo=true CP118128.1 Protein Homology CDS 1906413 1906835 . + 0 ID=cds-PUW31_09340;Parent=gene-PUW31_09340;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004892855.1;locus_tag=PUW31_09340;product=glycosyl hydrolase family 18 protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1907011 1907289 . - . ID=gene-PUW31_09345;Name=PUW31_09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09345 CP118128.1 Protein Homology CDS 1907011 1907289 . - 0 ID=cds-WJH10279.1;Parent=gene-PUW31_09345;Dbxref=NCBI_GP:WJH10279.1;Name=WJH10279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460258.1;locus_tag=PUW31_09345;product=YeaC family protein;protein_id=WJH10279.1;transl_table=11 CP118128.1 Genbank gene 1907331 1907744 . - . ID=gene-PUW31_09350;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=PUW31_09350 CP118128.1 Protein Homology CDS 1907331 1907744 . - 0 ID=cds-WJH10280.1;Parent=gene-PUW31_09350;Dbxref=NCBI_GP:WJH10280.1;Name=WJH10280.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=PUW31_09350;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WJH10280.1;transl_table=11 CP118128.1 Genbank gene 1908086 1909081 . + . ID=gene-PUW31_09355;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=PUW31_09355 CP118128.1 Protein Homology CDS 1908086 1909081 . + 0 ID=cds-WJH10281.1;Parent=gene-PUW31_09355;Dbxref=NCBI_GP:WJH10281.1;Name=WJH10281.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=PUW31_09355;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WJH10281.1;transl_table=11 CP118128.1 Genbank gene 1909409 1910293 . + . ID=gene-PUW31_09360;Name=PUW31_09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09360 CP118128.1 Protein Homology CDS 1909409 1910293 . + 0 ID=cds-WJH10282.1;Parent=gene-PUW31_09360;Dbxref=NCBI_GP:WJH10282.1;Name=WJH10282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460255.1;locus_tag=PUW31_09360;product=D-hexose-6-phosphate mutarotase;protein_id=WJH10282.1;transl_table=11 CP118128.1 Genbank gene 1910392 1911249 . - . ID=gene-PUW31_09365;Name=PUW31_09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09365 CP118128.1 Protein Homology CDS 1910392 1911249 . - 0 ID=cds-WJH10708.1;Parent=gene-PUW31_09365;Dbxref=NCBI_GP:WJH10708.1;Name=WJH10708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460254.1;locus_tag=PUW31_09365;product=aldo/keto reductase;protein_id=WJH10708.1;transl_table=11 CP118128.1 Genbank pseudogene 1911346 1912542 . - . ID=gene-PUW31_09370;Name=PUW31_09370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_09370;pseudo=true CP118128.1 Protein Homology CDS 1911346 1912542 . - 0 ID=cds-PUW31_09370;Parent=gene-PUW31_09370;Note=frameshifted;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460253.1;locus_tag=PUW31_09370;product=anaerobic sulfatase maturase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 1912771 1913016 . + . ID=gene-PUW31_09375;Name=PUW31_09375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_09375;pseudo=true CP118128.1 Protein Homology CDS 1912771 1913016 . + 0 ID=cds-PUW31_09375;Parent=gene-PUW31_09375;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460249.1;locus_tag=PUW31_09375;product=diguanylate cyclase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1913066 1913584 . + . ID=gene-PUW31_09380;Name=PUW31_09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09380 CP118128.1 Protein Homology CDS 1913066 1913584 . + 0 ID=cds-WJH10709.1;Parent=gene-PUW31_09380;Dbxref=NCBI_GP:WJH10709.1;Name=WJH10709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460248.1;locus_tag=PUW31_09380;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WJH10709.1;transl_table=11 CP118128.1 Genbank gene 1913581 1913688 . - . ID=gene-PUW31_09385;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=PUW31_09385 CP118128.1 Protein Homology CDS 1913581 1913688 . - 0 ID=cds-WJH10283.1;Parent=gene-PUW31_09385;Dbxref=NCBI_GP:WJH10283.1;Name=WJH10283.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460247.1;locus_tag=PUW31_09385;product=small membrane protein YoaI;protein_id=WJH10283.1;transl_table=11 CP118128.1 Genbank gene 1913894 1914340 . + . ID=gene-PUW31_09390;Name=PUW31_09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09390 CP118128.1 Protein Homology CDS 1913894 1914340 . + 0 ID=cds-WJH10284.1;Parent=gene-PUW31_09390;Dbxref=NCBI_GP:WJH10284.1;Name=WJH10284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460246.2;locus_tag=PUW31_09390;product=DUF441 domain-containing protein;protein_id=WJH10284.1;transl_table=11 CP118128.1 Genbank gene 1914320 1915114 . - . ID=gene-PUW31_09395;Name=PUW31_09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09395 CP118128.1 Protein Homology CDS 1914320 1915114 . - 0 ID=cds-WJH10285.1;Parent=gene-PUW31_09395;Dbxref=NCBI_GP:WJH10285.1;Name=WJH10285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460245.1;locus_tag=PUW31_09395;product=helix-turn-helix transcriptional regulator;protein_id=WJH10285.1;transl_table=11 CP118128.1 Genbank gene 1915215 1916399 . + . ID=gene-PUW31_09400;Name=PUW31_09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09400 CP118128.1 Protein Homology CDS 1915215 1916399 . + 0 ID=cds-WJH10286.1;Parent=gene-PUW31_09400;Dbxref=NCBI_GP:WJH10286.1;Name=WJH10286.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460244.1;locus_tag=PUW31_09400;product=CynX/NimT family MFS transporter;protein_id=WJH10286.1;transl_table=11 CP118128.1 Genbank gene 1916518 1916865 . + . ID=gene-PUW31_09405;Name=PUW31_09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09405 CP118128.1 Protein Homology CDS 1916518 1916865 . + 0 ID=cds-WJH10287.1;Parent=gene-PUW31_09405;Dbxref=NCBI_GP:WJH10287.1;Name=WJH10287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460243.1;locus_tag=PUW31_09405;product=DUF488 domain-containing protein;protein_id=WJH10287.1;transl_table=11 CP118128.1 Genbank gene 1916851 1917162 . - . ID=gene-PUW31_09410;Name=PUW31_09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09410 CP118128.1 Protein Homology CDS 1916851 1917162 . - 0 ID=cds-WJH10288.1;Parent=gene-PUW31_09410;Dbxref=NCBI_GP:WJH10288.1;Name=WJH10288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460242.1;locus_tag=PUW31_09410;product=hypothetical protein;protein_id=WJH10288.1;transl_table=11 CP118128.1 Genbank gene 1917231 1917482 . - . ID=gene-PUW31_09415;Name=PUW31_09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09415 CP118128.1 Protein Homology CDS 1917231 1917482 . - 0 ID=cds-WJH10289.1;Parent=gene-PUW31_09415;Dbxref=NCBI_GP:WJH10289.1;Name=WJH10289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460241.1;locus_tag=PUW31_09415;product=DUF333 domain-containing protein;protein_id=WJH10289.1;transl_table=11 CP118128.1 Genbank gene 1917678 1917776 . + . ID=gene-PUW31_09420;Name=PUW31_09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09420 CP118128.1 Protein Homology CDS 1917678 1917776 . + 0 ID=cds-WJH10290.1;Parent=gene-PUW31_09420;Dbxref=NCBI_GP:WJH10290.1;Name=WJH10290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=PUW31_09420;product=YoaK family small membrane protein;protein_id=WJH10290.1;transl_table=11 CP118128.1 Genbank gene 1917915 1918163 . - . ID=gene-PUW31_09425;Name=PUW31_09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09425 CP118128.1 Protein Homology CDS 1917915 1918163 . - 0 ID=cds-WJH10291.1;Parent=gene-PUW31_09425;Dbxref=NCBI_GP:WJH10291.1;Name=WJH10291.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460240.1;locus_tag=PUW31_09425;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WJH10291.1;transl_table=11 CP118128.1 Genbank gene 1918477 1919118 . - . ID=gene-PUW31_09430;Name=PUW31_09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09430 CP118128.1 Protein Homology CDS 1918477 1919118 . - 0 ID=cds-WJH10292.1;Parent=gene-PUW31_09430;Dbxref=NCBI_GP:WJH10292.1;Name=WJH10292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460239.1;locus_tag=PUW31_09430;product=hypothetical protein;protein_id=WJH10292.1;transl_table=11 CP118128.1 Genbank gene 1919348 1919530 . - . ID=gene-PUW31_09435;Name=PUW31_09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09435 CP118128.1 Protein Homology CDS 1919348 1919530 . - 0 ID=cds-WJH10293.1;Parent=gene-PUW31_09435;Dbxref=NCBI_GP:WJH10293.1;Name=WJH10293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460238.1;locus_tag=PUW31_09435;product=DUF1869 domain-containing protein;protein_id=WJH10293.1;transl_table=11 CP118128.1 Genbank gene 1919533 1919895 . - . ID=gene-PUW31_09440;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=PUW31_09440 CP118128.1 Protein Homology CDS 1919533 1919895 . - 0 ID=cds-WJH10294.1;Parent=gene-PUW31_09440;Dbxref=NCBI_GP:WJH10294.1;Name=WJH10294.1;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460237.1;locus_tag=PUW31_09440;product=DUF1971 domain-containing protein YeaR;protein_id=WJH10294.1;transl_table=11 CP118128.1 Genbank gene 1920068 1920706 . - . ID=gene-PUW31_09445;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=PUW31_09445 CP118128.1 Protein Homology CDS 1920068 1920706 . - 0 ID=cds-WJH10295.1;Parent=gene-PUW31_09445;Dbxref=NCBI_GP:WJH10295.1;Name=WJH10295.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460236.1;locus_tag=PUW31_09445;product=leucine efflux protein LeuE;protein_id=WJH10295.1;transl_table=11 CP118128.1 Genbank gene 1920903 1921448 . - . ID=gene-PUW31_09450;Name=PUW31_09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09450 CP118128.1 Protein Homology CDS 1920903 1921448 . - 0 ID=cds-WJH10296.1;Parent=gene-PUW31_09450;Dbxref=NCBI_GP:WJH10296.1;Name=WJH10296.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460235.1;locus_tag=PUW31_09450;product=chorismate mutase;protein_id=WJH10296.1;transl_table=11 CP118128.1 Genbank pseudogene 1921531 1921685 . + . ID=gene-PUW31_09455;Name=PUW31_09455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_09455;pseudo=true CP118128.1 Protein Homology CDS 1921531 1921685 . + 0 ID=cds-PUW31_09455;Parent=gene-PUW31_09455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460234.1;locus_tag=PUW31_09455;product=hypothetical protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1921764 1922012 . + . ID=gene-PUW31_09460;Name=PUW31_09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09460 CP118128.1 Protein Homology CDS 1921764 1922012 . + 0 ID=cds-WJH10297.1;Parent=gene-PUW31_09460;Dbxref=NCBI_GP:WJH10297.1;Name=WJH10297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460233.1;locus_tag=PUW31_09460;product=biofilm/acid-resistance regulator YmgB/AriR;protein_id=WJH10297.1;transl_table=11 CP118128.1 Genbank gene 1922266 1923114 . - . ID=gene-PUW31_09465;Name=PUW31_09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09465 CP118128.1 Protein Homology CDS 1922266 1923114 . - 0 ID=cds-WJH10298.1;Parent=gene-PUW31_09465;Dbxref=NCBI_GP:WJH10298.1;Name=WJH10298.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460232.1;locus_tag=PUW31_09465;product=MerR family transcriptional regulator;protein_id=WJH10298.1;transl_table=11 CP118128.1 Genbank gene 1923183 1923776 . - . ID=gene-PUW31_09470;Name=PUW31_09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09470 CP118128.1 Protein Homology CDS 1923183 1923776 . - 0 ID=cds-WJH10710.1;Parent=gene-PUW31_09470;Dbxref=NCBI_GP:WJH10710.1;Name=WJH10710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460231.1;locus_tag=PUW31_09470;product=helix-turn-helix transcriptional regulator;protein_id=WJH10710.1;transl_table=11 CP118128.1 Genbank gene 1923921 1924709 . - . ID=gene-PUW31_09475;Name=aadA;gbkey=Gene;gene=aadA;gene_biotype=protein_coding;locus_tag=PUW31_09475 CP118128.1 Protein Homology CDS 1923921 1924709 . - 0 ID=cds-WJH10299.1;Parent=gene-PUW31_09475;Dbxref=NCBI_GP:WJH10299.1;Name=WJH10299.1;gbkey=CDS;gene=aadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460230.1;locus_tag=PUW31_09475;product=cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9);protein_id=WJH10299.1;transl_table=11 CP118128.1 Genbank pseudogene 1924818 1925464 . - . ID=gene-PUW31_09480;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=pseudogene;locus_tag=PUW31_09480;pseudo=true CP118128.1 Protein Homology CDS 1924818 1925464 . - 0 ID=cds-PUW31_09480;Parent=gene-PUW31_09480;Note=frameshifted;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460229.3;locus_tag=PUW31_09480;product=metal-binding protein ZinT;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1925576 1925652 . - . ID=gene-PUW31_09485;Name=PUW31_09485;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_09485 CP118128.1 tRNAscan-SE tRNA 1925576 1925652 . - . ID=rna-PUW31_09485;Parent=gene-PUW31_09485;anticodon=(pos:complement(1925616..1925618));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_09485;product=tRNA-Arg CP118128.1 tRNAscan-SE exon 1925576 1925652 . - . ID=exon-PUW31_09485-1;Parent=rna-PUW31_09485;anticodon=(pos:complement(1925616..1925618));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_09485;product=tRNA-Arg CP118128.1 Genbank gene 1925661 1925987 . - . ID=gene-PUW31_09490;Name=PUW31_09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09490 CP118128.1 Protein Homology CDS 1925661 1925987 . - 0 ID=cds-WJH10300.1;Parent=gene-PUW31_09490;Dbxref=NCBI_GP:WJH10300.1;Name=WJH10300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460228.1;locus_tag=PUW31_09490;product=four-helix bundle copper-binding protein;protein_id=WJH10300.1;transl_table=11 CP118128.1 Genbank pseudogene 1926181 1927313 . + . ID=gene-PUW31_09495;Name=PUW31_09495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_09495;pseudo=true CP118128.1 Protein Homology CDS 1926181 1927313 . + 0 ID=cds-PUW31_09495;Parent=gene-PUW31_09495;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460227.1;locus_tag=PUW31_09495;product=mechanosensitive ion channel family protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1927395 1927985 . - . ID=gene-PUW31_09500;Name=PUW31_09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09500 CP118128.1 Protein Homology CDS 1927395 1927985 . - 0 ID=cds-WJH10301.1;Parent=gene-PUW31_09500;Dbxref=NCBI_GP:WJH10301.1;Name=WJH10301.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460226.1;locus_tag=PUW31_09500;product=ATP-binding cassette domain-containing protein;protein_id=WJH10301.1;transl_table=11 CP118128.1 Genbank gene 1927979 1928776 . - . ID=gene-PUW31_09505;Name=PUW31_09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09505 CP118128.1 Protein Homology CDS 1927979 1928776 . - 0 ID=cds-WJH10302.1;Parent=gene-PUW31_09505;Dbxref=NCBI_GP:WJH10302.1;Name=WJH10302.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460225.1;locus_tag=PUW31_09505;product=ATP-binding cassette domain-containing protein;protein_id=WJH10302.1;transl_table=11 CP118128.1 Genbank gene 1928770 1929582 . - . ID=gene-PUW31_09510;Name=PUW31_09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09510 CP118128.1 Protein Homology CDS 1928770 1929582 . - 0 ID=cds-WJH10303.1;Parent=gene-PUW31_09510;Dbxref=NCBI_GP:WJH10303.1;Name=WJH10303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460224.1;locus_tag=PUW31_09510;product=ABC transporter permease;protein_id=WJH10303.1;transl_table=11 CP118128.1 Genbank gene 1929572 1930546 . - . ID=gene-PUW31_09515;Name=PUW31_09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09515 CP118128.1 Protein Homology CDS 1929572 1930546 . - 0 ID=cds-WJH10711.1;Parent=gene-PUW31_09515;Dbxref=NCBI_GP:WJH10711.1;Name=WJH10711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460223.1;locus_tag=PUW31_09515;product=ABC transporter permease;protein_id=WJH10711.1;transl_table=11 CP118128.1 Genbank pseudogene 1930546 1932179 . - . ID=gene-PUW31_09520;Name=PUW31_09520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_09520;pseudo=true CP118128.1 Protein Homology CDS 1930546 1932179 . - 0 ID=cds-PUW31_09520;Parent=gene-PUW31_09520;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460222.1;locus_tag=PUW31_09520;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1932861 1933175 . + . ID=gene-PUW31_09525;Name=PUW31_09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09525 CP118128.1 Protein Homology CDS 1932861 1933175 . + 0 ID=cds-WJH10304.1;Parent=gene-PUW31_09525;Dbxref=NCBI_GP:WJH10304.1;Name=WJH10304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460221.1;locus_tag=PUW31_09525;product=TRL-like family protein;protein_id=WJH10304.1;transl_table=11 CP118128.1 Genbank gene 1933324 1933854 . + . ID=gene-PUW31_09530;Name=PUW31_09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09530 CP118128.1 Protein Homology CDS 1933324 1933854 . + 0 ID=cds-WJH10305.1;Parent=gene-PUW31_09530;Dbxref=NCBI_GP:WJH10305.1;Name=WJH10305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460220.1;locus_tag=PUW31_09530;product=cytochrome b;protein_id=WJH10305.1;transl_table=11 CP118128.1 Genbank gene 1933937 1934980 . - . ID=gene-PUW31_09535;Name=PUW31_09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09535 CP118128.1 Protein Homology CDS 1933937 1934980 . - 0 ID=cds-WJH10306.1;Parent=gene-PUW31_09535;Dbxref=NCBI_GP:WJH10306.1;Name=WJH10306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460219.1;locus_tag=PUW31_09535;product=exo-alpha-sialidase;protein_id=WJH10306.1;transl_table=11 CP118128.1 Genbank gene 1935319 1935786 . - . ID=gene-PUW31_09540;Name=PUW31_09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09540 CP118128.1 Protein Homology CDS 1935319 1935786 . - 0 ID=cds-WJH10712.1;Parent=gene-PUW31_09540;Dbxref=NCBI_GP:WJH10712.1;Name=WJH10712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460218.1;locus_tag=PUW31_09540;product=Hsp20 family protein;protein_id=WJH10712.1;transl_table=11 CP118128.1 Genbank gene 1935939 1936211 . - . ID=gene-PUW31_09545;Name=PUW31_09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09545 CP118128.1 Protein Homology CDS 1935939 1936211 . - 0 ID=cds-WJH10307.1;Parent=gene-PUW31_09545;Dbxref=NCBI_GP:WJH10307.1;Name=WJH10307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460217.1;locus_tag=PUW31_09545;product=hypothetical protein;protein_id=WJH10307.1;transl_table=11 CP118128.1 Genbank gene 1936914 1937258 . + . ID=gene-PUW31_09550;Name=PUW31_09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09550 CP118128.1 Protein Homology CDS 1936914 1937258 . + 0 ID=cds-WJH10308.1;Parent=gene-PUW31_09550;Dbxref=NCBI_GP:WJH10308.1;Name=WJH10308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460216.1;locus_tag=PUW31_09550;product=c-type lysozyme inhibitor;protein_id=WJH10308.1;transl_table=11 CP118128.1 Genbank gene 1938013 1938089 . - . ID=gene-PUW31_09555;Name=PUW31_09555;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_09555 CP118128.1 tRNAscan-SE tRNA 1938013 1938089 . - . ID=rna-PUW31_09555;Parent=gene-PUW31_09555;anticodon=(pos:complement(1938053..1938055));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_09555;product=tRNA-Arg CP118128.1 tRNAscan-SE exon 1938013 1938089 . - . ID=exon-PUW31_09555-1;Parent=rna-PUW31_09555;anticodon=(pos:complement(1938053..1938055));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_09555;product=tRNA-Arg CP118128.1 Genbank gene 1938480 1939037 . - . ID=gene-PUW31_09560;Name=pagC;gbkey=Gene;gene=pagC;gene_biotype=protein_coding;locus_tag=PUW31_09560 CP118128.1 Protein Homology CDS 1938480 1939037 . - 0 ID=cds-WJH10309.1;Parent=gene-PUW31_09560;Dbxref=NCBI_GP:WJH10309.1;Name=WJH10309.1;gbkey=CDS;gene=pagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460215.1;locus_tag=PUW31_09560;product=virulence membrane protein PagC;protein_id=WJH10309.1;transl_table=11 CP118128.1 Genbank gene 1939849 1940112 . + . ID=gene-PUW31_09565;Name=pagD;gbkey=Gene;gene=pagD;gene_biotype=protein_coding;locus_tag=PUW31_09565 CP118128.1 Protein Homology CDS 1939849 1940112 . + 0 ID=cds-WJH10310.1;Parent=gene-PUW31_09565;Dbxref=NCBI_GP:WJH10310.1;Name=WJH10310.1;gbkey=CDS;gene=pagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460214.1;locus_tag=PUW31_09565;product=virulence protein PagD;protein_id=WJH10310.1;transl_table=11 CP118128.1 Genbank pseudogene 1940244 1940445 . + . ID=gene-PUW31_09570;Name=cspF;gbkey=Gene;gene=cspF;gene_biotype=pseudogene;locus_tag=PUW31_09570;pseudo=true CP118128.1 Protein Homology CDS 1940244 1940445 . + 0 ID=cds-PUW31_09570;Parent=gene-PUW31_09570;Note=frameshifted;gbkey=CDS;gene=cspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460213.1;locus_tag=PUW31_09570;product=cold shock-like protein CspF;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1940860 1941381 . + . ID=gene-PUW31_09575;Name=PUW31_09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09575 CP118128.1 Protein Homology CDS 1940860 1941381 . + 0 ID=cds-WJH10311.1;Parent=gene-PUW31_09575;Dbxref=NCBI_GP:WJH10311.1;Name=WJH10311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460212.1;locus_tag=PUW31_09575;product=RICIN domain-containing protein;protein_id=WJH10311.1;transl_table=11 CP118128.1 Genbank gene 1941572 1941811 . + . ID=gene-PUW31_09580;Name=msgA;gbkey=Gene;gene=msgA;gene_biotype=protein_coding;locus_tag=PUW31_09580 CP118128.1 Protein Homology CDS 1941572 1941811 . + 0 ID=cds-WJH10312.1;Parent=gene-PUW31_09580;Dbxref=NCBI_GP:WJH10312.1;Name=WJH10312.1;gbkey=CDS;gene=msgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460211.1;locus_tag=PUW31_09580;product=virulence protein MsgA;protein_id=WJH10312.1;transl_table=11 CP118128.1 Genbank pseudogene 1942301 1943090 . + . ID=gene-PUW31_09585;Name=PUW31_09585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_09585;pseudo=true CP118128.1 Protein Homology CDS 1942301 1943090 . + 0 ID=cds-PUW31_09585;Parent=gene-PUW31_09585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460210.1;locus_tag=PUW31_09585;product=lipoprotein EnvF;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1944078 1945202 . - . ID=gene-PUW31_09590;Name=sopF;gbkey=Gene;gene=sopF;gene_biotype=protein_coding;locus_tag=PUW31_09590 CP118128.1 Protein Homology CDS 1944078 1945202 . - 0 ID=cds-WJH10313.1;Parent=gene-PUW31_09590;Dbxref=NCBI_GP:WJH10313.1;Name=WJH10313.1;gbkey=CDS;gene=sopF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460209.1;locus_tag=PUW31_09590;product=type III secretion system effector SopF;protein_id=WJH10313.1;transl_table=11 CP118128.1 Genbank gene 1945663 1946913 . - . ID=gene-PUW31_09595;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=PUW31_09595 CP118128.1 Protein Homology CDS 1945663 1946913 . - 0 ID=cds-WJH10314.1;Parent=gene-PUW31_09595;Dbxref=NCBI_GP:WJH10314.1;Name=WJH10314.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=PUW31_09595;product=NADP-dependent isocitrate dehydrogenase;protein_id=WJH10314.1;transl_table=11 CP118128.1 Genbank gene 1947085 1947750 . + . ID=gene-PUW31_09600;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=PUW31_09600 CP118128.1 Protein Homology CDS 1947085 1947750 . + 0 ID=cds-WJH10315.1;Parent=gene-PUW31_09600;Dbxref=NCBI_GP:WJH10315.1;Name=WJH10315.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460207.1;locus_tag=PUW31_09600;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WJH10315.1;transl_table=11 CP118128.1 Genbank gene 1947747 1948076 . + . ID=gene-PUW31_09605;Name=PUW31_09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09605 CP118128.1 Protein Homology CDS 1947747 1948076 . + 0 ID=cds-WJH10316.1;Parent=gene-PUW31_09605;Dbxref=NCBI_GP:WJH10316.1;Name=WJH10316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460206.1;locus_tag=PUW31_09605;product=hypothetical protein;protein_id=WJH10316.1;transl_table=11 CP118128.1 Genbank gene 1948088 1948549 . + . ID=gene-PUW31_09610;Name=PUW31_09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09610 CP118128.1 Protein Homology CDS 1948088 1948549 . + 0 ID=cds-WJH10317.1;Parent=gene-PUW31_09610;Dbxref=NCBI_GP:WJH10317.1;Name=WJH10317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460205.1;locus_tag=PUW31_09610;product=NUDIX hydrolase;protein_id=WJH10317.1;transl_table=11 CP118128.1 Genbank gene 1948603 1949709 . + . ID=gene-PUW31_09615;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=PUW31_09615 CP118128.1 Protein Homology CDS 1948603 1949709 . + 0 ID=cds-WJH10318.1;Parent=gene-PUW31_09615;Dbxref=NCBI_GP:WJH10318.1;Name=WJH10318.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309632.2;locus_tag=PUW31_09615;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WJH10318.1;transl_table=11 CP118128.1 Genbank gene 1949796 1950437 . + . ID=gene-PUW31_09620;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=PUW31_09620 CP118128.1 Protein Homology CDS 1949796 1950437 . + 0 ID=cds-WJH10319.1;Parent=gene-PUW31_09620;Dbxref=NCBI_GP:WJH10319.1;Name=WJH10319.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=PUW31_09620;product=high frequency lysogenization protein HflD;protein_id=WJH10319.1;transl_table=11 CP118128.1 Genbank gene 1950441 1951811 . + . ID=gene-PUW31_09625;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=PUW31_09625 CP118128.1 Protein Homology CDS 1950441 1951811 . + 0 ID=cds-WJH10320.1;Parent=gene-PUW31_09625;Dbxref=NCBI_GP:WJH10320.1;Name=WJH10320.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=PUW31_09625;product=adenylosuccinate lyase;protein_id=WJH10320.1;transl_table=11 CP118128.1 Genbank gene 1951938 1952609 . + . ID=gene-PUW31_09630;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=PUW31_09630 CP118128.1 Protein Homology CDS 1951938 1952609 . + 0 ID=cds-WJH10713.1;Parent=gene-PUW31_09630;Dbxref=NCBI_GP:WJH10713.1;Name=WJH10713.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707059.1;locus_tag=PUW31_09630;product=two-component system response regulator PhoP;protein_id=WJH10713.1;transl_table=11 CP118128.1 Genbank gene 1952609 1954072 . + . ID=gene-PUW31_09635;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=PUW31_09635 CP118128.1 Protein Homology CDS 1952609 1954072 . + 0 ID=cds-WJH10321.1;Parent=gene-PUW31_09635;Dbxref=NCBI_GP:WJH10321.1;Name=WJH10321.1;gbkey=CDS;gene=phoQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460200.1;locus_tag=PUW31_09635;product=two-component system sensor histidine kinase PhoQ;protein_id=WJH10321.1;transl_table=11 CP118128.1 Genbank gene 1954153 1955274 . + . ID=gene-PUW31_09640;Name=roxA;gbkey=Gene;gene=roxA;gene_biotype=protein_coding;gene_synonym=ycfD;locus_tag=PUW31_09640 CP118128.1 Protein Homology CDS 1954153 1955274 . + 0 ID=cds-WJH10322.1;Parent=gene-PUW31_09640;Dbxref=NCBI_GP:WJH10322.1;Name=WJH10322.1;gbkey=CDS;gene=roxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460199.1;locus_tag=PUW31_09640;product=[50S ribosomal protein L16]-arginine 3-hydroxylase;protein_id=WJH10322.1;transl_table=11 CP118128.1 Genbank gene 1955314 1956648 . - . ID=gene-PUW31_09645;Name=PUW31_09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09645 CP118128.1 Protein Homology CDS 1955314 1956648 . - 0 ID=cds-WJH10323.1;Parent=gene-PUW31_09645;Dbxref=NCBI_GP:WJH10323.1;Name=WJH10323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460198.1;locus_tag=PUW31_09645;product=hypothetical protein;protein_id=WJH10323.1;transl_table=11 CP118128.1 Genbank gene 1956652 1957881 . - . ID=gene-PUW31_09650;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=PUW31_09650 CP118128.1 Protein Homology CDS 1956652 1957881 . - 0 ID=cds-WJH10324.1;Parent=gene-PUW31_09650;Dbxref=NCBI_GP:WJH10324.1;Name=WJH10324.1;Ontology_term=GO:0006508,GO:0045148;gbkey=CDS;gene=pepT;go_function=tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460197.1;locus_tag=PUW31_09650;product=peptidase T;protein_id=WJH10324.1;transl_table=11 CP118128.1 Genbank gene 1958132 1959268 . + . ID=gene-PUW31_09655;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=PUW31_09655 CP118128.1 Protein Homology CDS 1958132 1959268 . + 0 ID=cds-WJH10325.1;Parent=gene-PUW31_09655;Dbxref=NCBI_GP:WJH10325.1;Name=WJH10325.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460196.1;locus_tag=PUW31_09655;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WJH10325.1;transl_table=11 CP118128.1 Genbank gene 1959252 1960115 . + . ID=gene-PUW31_09660;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=PUW31_09660 CP118128.1 Protein Homology CDS 1959252 1960115 . + 0 ID=cds-WJH10326.1;Parent=gene-PUW31_09660;Dbxref=NCBI_GP:WJH10326.1;Name=WJH10326.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460195.1;locus_tag=PUW31_09660;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WJH10326.1;transl_table=11 CP118128.1 Genbank gene 1960444 1961454 . + . ID=gene-PUW31_09665;Name=sifA;gbkey=Gene;gene=sifA;gene_biotype=protein_coding;locus_tag=PUW31_09665 CP118128.1 Protein Homology CDS 1960444 1961454 . + 0 ID=cds-WJH10327.1;Parent=gene-PUW31_09665;Dbxref=NCBI_GP:WJH10327.1;Name=WJH10327.1;gbkey=CDS;gene=sifA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460194.1;locus_tag=PUW31_09665;product=SPI-2 type III secretion system effector SifA;protein_id=WJH10327.1;transl_table=11 CP118128.1 Genbank gene 1961545 1961715 . + . ID=gene-PUW31_09670;Name=PUW31_09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09670 CP118128.1 GeneMarkS-2+ CDS 1961545 1961715 . + 0 ID=cds-WJH10328.1;Parent=gene-PUW31_09670;Dbxref=NCBI_GP:WJH10328.1;Name=WJH10328.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_09670;product=hypothetical protein;protein_id=WJH10328.1;transl_table=11 CP118128.1 Genbank gene 1961771 1962550 . + . ID=gene-PUW31_09675;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=PUW31_09675 CP118128.1 Protein Homology CDS 1961771 1962550 . + 0 ID=cds-WJH10329.1;Parent=gene-PUW31_09675;Dbxref=NCBI_GP:WJH10329.1;Name=WJH10329.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460193.1;locus_tag=PUW31_09675;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WJH10329.1;transl_table=11 CP118128.1 Genbank gene 1962575 1963621 . + . ID=gene-PUW31_09680;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=PUW31_09680 CP118128.1 Protein Homology CDS 1962575 1963621 . + 0 ID=cds-WJH10330.1;Parent=gene-PUW31_09680;Dbxref=NCBI_GP:WJH10330.1;Name=WJH10330.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=PUW31_09680;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WJH10330.1;transl_table=11 CP118128.1 Genbank gene 1963703 1964524 . - . ID=gene-PUW31_09685;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=PUW31_09685 CP118128.1 Protein Homology CDS 1963703 1964524 . - 0 ID=cds-WJH10331.1;Parent=gene-PUW31_09685;Dbxref=NCBI_GP:WJH10331.1;Name=WJH10331.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=PUW31_09685;product=NAD-dependent protein deacylase;protein_id=WJH10331.1;transl_table=11 CP118128.1 Genbank gene 1964543 1965454 . - . ID=gene-PUW31_09690;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=PUW31_09690 CP118128.1 Protein Homology CDS 1964543 1965454 . - 0 ID=cds-WJH10332.1;Parent=gene-PUW31_09690;Dbxref=NCBI_GP:WJH10332.1;Name=WJH10332.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460190.1;locus_tag=PUW31_09690;product=N-acetylglucosamine kinase;protein_id=WJH10332.1;transl_table=11 CP118128.1 Genbank gene 1965483 1966727 . - . ID=gene-PUW31_09695;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=PUW31_09695 CP118128.1 Protein Homology CDS 1965483 1966727 . - 0 ID=cds-WJH10333.1;Parent=gene-PUW31_09695;Dbxref=NCBI_GP:WJH10333.1;Name=WJH10333.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460189.1;locus_tag=PUW31_09695;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WJH10333.1;transl_table=11 CP118128.1 Genbank gene 1966727 1967428 . - . ID=gene-PUW31_09700;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=PUW31_09700 CP118128.1 Protein Homology CDS 1966727 1967428 . - 0 ID=cds-WJH10334.1;Parent=gene-PUW31_09700;Dbxref=NCBI_GP:WJH10334.1;Name=WJH10334.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460188.1;locus_tag=PUW31_09700;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WJH10334.1;transl_table=11 CP118128.1 Genbank gene 1967421 1968620 . - . ID=gene-PUW31_09705;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=PUW31_09705 CP118128.1 Protein Homology CDS 1967421 1968620 . - 0 ID=cds-WJH10335.1;Parent=gene-PUW31_09705;Dbxref=NCBI_GP:WJH10335.1;Name=WJH10335.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=PUW31_09705;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WJH10335.1;transl_table=11 CP118128.1 Genbank pseudogene 1968958 1972403 . + . ID=gene-PUW31_09710;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=pseudogene;locus_tag=PUW31_09710;pseudo=true CP118128.1 Protein Homology CDS 1968958 1972403 . + 0 ID=cds-PUW31_09710;Parent=gene-PUW31_09710;Note=frameshifted;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460186.1;locus_tag=PUW31_09710;product=transcription-repair coupling factor;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1972551 1973516 . + . ID=gene-PUW31_09715;Name=PUW31_09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09715 CP118128.1 Protein Homology CDS 1972551 1973516 . + 0 ID=cds-WJH10336.1;Parent=gene-PUW31_09715;Dbxref=NCBI_GP:WJH10336.1;Name=WJH10336.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460185.1;locus_tag=PUW31_09715;product=L%2CD-transpeptidase family protein;protein_id=WJH10336.1;transl_table=11 CP118128.1 Genbank gene 1973613 1973870 . - . ID=gene-PUW31_09720;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;gene_synonym=ycfR;locus_tag=PUW31_09720 CP118128.1 Protein Homology CDS 1973613 1973870 . - 0 ID=cds-WJH10337.1;Parent=gene-PUW31_09720;Dbxref=NCBI_GP:WJH10337.1;Name=WJH10337.1;gbkey=CDS;gene=bhsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460184.1;locus_tag=PUW31_09720;product=multiple stress resistance protein BhsA;protein_id=WJH10337.1;transl_table=11 CP118128.1 Genbank gene 1974112 1974747 . + . ID=gene-PUW31_09725;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=PUW31_09725 CP118128.1 Protein Homology CDS 1974112 1974747 . + 0 ID=cds-WJH10338.1;Parent=gene-PUW31_09725;Dbxref=NCBI_GP:WJH10338.1;Name=WJH10338.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460183.1;locus_tag=PUW31_09725;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WJH10338.1;transl_table=11 CP118128.1 Genbank pseudogene 1974821 1975337 . - . ID=gene-PUW31_09730;Name=PUW31_09730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_09730;pseudo=true CP118128.1 Protein Homology CDS 1974821 1975337 . - 0 ID=cds-PUW31_09730;Parent=gene-PUW31_09730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460182.1;locus_tag=PUW31_09730;product=glycine zipper 2TM domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 1975516 1976820 . - . ID=gene-PUW31_09735;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=PUW31_09735 CP118128.1 Protein Homology CDS 1975516 1976820 . - 0 ID=cds-WJH10339.1;Parent=gene-PUW31_09735;Dbxref=NCBI_GP:WJH10339.1;Name=WJH10339.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=PUW31_09735;product=NADH-quinone dehydrogenase;protein_id=WJH10339.1;transl_table=11 CP118128.1 Genbank gene 1977075 1977617 . - . ID=gene-PUW31_09740;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=PUW31_09740 CP118128.1 Protein Homology CDS 1977075 1977617 . - 0 ID=cds-WJH10340.1;Parent=gene-PUW31_09740;Dbxref=NCBI_GP:WJH10340.1;Name=WJH10340.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=PUW31_09740;product=alpha/beta hydrolase YcfP;protein_id=WJH10340.1;transl_table=11 CP118128.1 Genbank gene 1977642 1978667 . - . ID=gene-PUW31_09745;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=PUW31_09745 CP118128.1 Protein Homology CDS 1977642 1978667 . - 0 ID=cds-WJH10341.1;Parent=gene-PUW31_09745;Dbxref=NCBI_GP:WJH10341.1;Name=WJH10341.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460179.1;locus_tag=PUW31_09745;product=beta-N-acetylhexosaminidase;protein_id=WJH10341.1;transl_table=11 CP118128.1 Genbank gene 1978678 1979502 . - . ID=gene-PUW31_09750;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=PUW31_09750 CP118128.1 Protein Homology CDS 1978678 1979502 . - 0 ID=cds-WJH10342.1;Parent=gene-PUW31_09750;Dbxref=NCBI_GP:WJH10342.1;Name=WJH10342.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460178.1;locus_tag=PUW31_09750;product=thiamine kinase;protein_id=WJH10342.1;transl_table=11 CP118128.1 Genbank gene 1979483 1980121 . - . ID=gene-PUW31_09755;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=PUW31_09755 CP118128.1 Protein Homology CDS 1979483 1980121 . - 0 ID=cds-WJH10343.1;Parent=gene-PUW31_09755;Dbxref=NCBI_GP:WJH10343.1;Name=WJH10343.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460177.1;locus_tag=PUW31_09755;product=penicillin-binding protein activator LpoB;protein_id=WJH10343.1;transl_table=11 CP118128.1 Genbank gene 1980135 1980509 . - . ID=gene-PUW31_09760;Name=PUW31_09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09760 CP118128.1 Protein Homology CDS 1980135 1980509 . - 0 ID=cds-WJH10344.1;Parent=gene-PUW31_09760;Dbxref=NCBI_GP:WJH10344.1;Name=WJH10344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460176.1;locus_tag=PUW31_09760;product=YcfL family protein;protein_id=WJH10344.1;transl_table=11 CP118128.1 Genbank gene 1980512 1980871 . - . ID=gene-PUW31_09765;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=PUW31_09765 CP118128.1 Protein Homology CDS 1980512 1980871 . - 0 ID=cds-WJH10345.1;Parent=gene-PUW31_09765;Dbxref=NCBI_GP:WJH10345.1;Name=WJH10345.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460175.1;locus_tag=PUW31_09765;product=purine nucleoside phosphoramidase;protein_id=WJH10345.1;transl_table=11 CP118128.1 Genbank gene 1981213 1983387 . + . ID=gene-PUW31_09770;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=PUW31_09770 CP118128.1 Protein Homology CDS 1981213 1983387 . + 0 ID=cds-WJH10346.1;Parent=gene-PUW31_09770;Dbxref=NCBI_GP:WJH10346.1;Name=WJH10346.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460174.1;locus_tag=PUW31_09770;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=WJH10346.1;transl_table=11 CP118128.1 Genbank gene 1983472 1984905 . - . ID=gene-PUW31_09775;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=PUW31_09775 CP118128.1 Protein Homology CDS 1983472 1984905 . - 0 ID=cds-WJH10347.1;Parent=gene-PUW31_09775;Dbxref=NCBI_GP:WJH10347.1;Name=WJH10347.1;Ontology_term=GO:0009401,GO:1904659,GO:0005355,GO:0008982;gbkey=CDS;gene=ptsG;go_function=glucose transmembrane transporter activity|0005355||IEA,protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460173.1;locus_tag=PUW31_09775;product=PTS glucose transporter subunit IIBC;protein_id=WJH10347.1;transl_table=11 CP118128.1 Genbank gene 1985200 1985997 . - . ID=gene-PUW31_09780;Name=PUW31_09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09780 CP118128.1 Protein Homology CDS 1985200 1985997 . - 0 ID=cds-WJH10348.1;Parent=gene-PUW31_09780;Dbxref=NCBI_GP:WJH10348.1;Name=WJH10348.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460172.1;locus_tag=PUW31_09780;product=metal-dependent hydrolase;protein_id=WJH10348.1;transl_table=11 CP118128.1 Genbank gene 1986008 1987012 . - . ID=gene-PUW31_09785;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=PUW31_09785 CP118128.1 Protein Homology CDS 1986008 1987012 . - 0 ID=cds-WJH10349.1;Parent=gene-PUW31_09785;Dbxref=NCBI_GP:WJH10349.1;Name=WJH10349.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460171.1;locus_tag=PUW31_09785;product=DNA polymerase III subunit delta';protein_id=WJH10349.1;transl_table=11 CP118128.1 Genbank gene 1987009 1987650 . - . ID=gene-PUW31_09790;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=PUW31_09790 CP118128.1 Protein Homology CDS 1987009 1987650 . - 0 ID=cds-WJH10350.1;Parent=gene-PUW31_09790;Dbxref=NCBI_GP:WJH10350.1;Name=WJH10350.1;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460170.1;locus_tag=PUW31_09790;product=dTMP kinase;protein_id=WJH10350.1;transl_table=11 CP118128.1 Genbank gene 1987640 1988662 . - . ID=gene-PUW31_09795;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=PUW31_09795 CP118128.1 Protein Homology CDS 1987640 1988662 . - 0 ID=cds-WJH10351.1;Parent=gene-PUW31_09795;Dbxref=NCBI_GP:WJH10351.1;Name=WJH10351.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460169.1;locus_tag=PUW31_09795;product=cell division protein YceG;protein_id=WJH10351.1;transl_table=11 CP118128.1 Genbank gene 1988665 1989474 . - . ID=gene-PUW31_09800;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=PUW31_09800 CP118128.1 Protein Homology CDS 1988665 1989474 . - 0 ID=cds-WJH10352.1;Parent=gene-PUW31_09800;Dbxref=NCBI_GP:WJH10352.1;Name=WJH10352.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460168.1;locus_tag=PUW31_09800;product=aminodeoxychorismate lyase;protein_id=WJH10352.1;transl_table=11 CP118128.1 Genbank gene 1989598 1990839 . - . ID=gene-PUW31_09805;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=PUW31_09805 CP118128.1 Protein Homology CDS 1989598 1990839 . - 0 ID=cds-WJH10353.1;Parent=gene-PUW31_09805;Dbxref=NCBI_GP:WJH10353.1;Name=WJH10353.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460167.1;locus_tag=PUW31_09805;product=beta-ketoacyl-ACP synthase II;protein_id=WJH10353.1;transl_table=11 CP118128.1 Genbank gene 1990925 1991161 . - . ID=gene-PUW31_09810;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=PUW31_09810 CP118128.1 Protein Homology CDS 1990925 1991161 . - 0 ID=cds-WJH10354.1;Parent=gene-PUW31_09810;Dbxref=NCBI_GP:WJH10354.1;Name=WJH10354.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=PUW31_09810;product=acyl carrier protein;protein_id=WJH10354.1;transl_table=11 CP118128.1 Genbank gene 1991317 1992051 . - . ID=gene-PUW31_09815;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=PUW31_09815 CP118128.1 Protein Homology CDS 1991317 1992051 . - 0 ID=cds-WJH10355.1;Parent=gene-PUW31_09815;Dbxref=NCBI_GP:WJH10355.1;Name=WJH10355.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=PUW31_09815;product=3-oxoacyl-ACP reductase FabG;protein_id=WJH10355.1;transl_table=11 CP118128.1 Genbank gene 1992064 1992993 . - . ID=gene-PUW31_09820;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=PUW31_09820 CP118128.1 Protein Homology CDS 1992064 1992993 . - 0 ID=cds-WJH10356.1;Parent=gene-PUW31_09820;Dbxref=NCBI_GP:WJH10356.1;Name=WJH10356.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460164.1;locus_tag=PUW31_09820;product=ACP S-malonyltransferase;protein_id=WJH10356.1;transl_table=11 CP118128.1 Genbank gene 1993009 1993962 . - . ID=gene-PUW31_09825;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=PUW31_09825 CP118128.1 Protein Homology CDS 1993009 1993962 . - 0 ID=cds-WJH10357.1;Parent=gene-PUW31_09825;Dbxref=NCBI_GP:WJH10357.1;Name=WJH10357.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=PUW31_09825;product=beta-ketoacyl-ACP synthase III;protein_id=WJH10357.1;transl_table=11 CP118128.1 Genbank gene 1994042 1995121 . - . ID=gene-PUW31_09830;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=PUW31_09830 CP118128.1 Protein Homology CDS 1994042 1995121 . - 0 ID=cds-WJH10358.1;Parent=gene-PUW31_09830;Dbxref=NCBI_GP:WJH10358.1;Name=WJH10358.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460162.1;locus_tag=PUW31_09830;product=phosphate acyltransferase PlsX;protein_id=WJH10358.1;transl_table=11 CP118128.1 Genbank gene 1995255 1995428 . - . ID=gene-PUW31_09835;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=PUW31_09835 CP118128.1 Protein Homology CDS 1995255 1995428 . - 0 ID=cds-WJH10359.1;Parent=gene-PUW31_09835;Dbxref=NCBI_GP:WJH10359.1;Name=WJH10359.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=PUW31_09835;product=50S ribosomal protein L32;protein_id=WJH10359.1;transl_table=11 CP118128.1 Genbank gene 1995480 1996001 . - . ID=gene-PUW31_09840;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=PUW31_09840 CP118128.1 Protein Homology CDS 1995480 1996001 . - 0 ID=cds-WJH10360.1;Parent=gene-PUW31_09840;Dbxref=NCBI_GP:WJH10360.1;Name=WJH10360.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=PUW31_09840;product=23S rRNA accumulation protein YceD;protein_id=WJH10360.1;transl_table=11 CP118128.1 Genbank gene 1996199 1996783 . + . ID=gene-PUW31_09845;Name=PUW31_09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09845 CP118128.1 Protein Homology CDS 1996199 1996783 . + 0 ID=cds-WJH10361.1;Parent=gene-PUW31_09845;Dbxref=NCBI_GP:WJH10361.1;Name=WJH10361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460159.1;locus_tag=PUW31_09845;product=Maf family protein;protein_id=WJH10361.1;transl_table=11 CP118128.1 Genbank gene 1996854 1997078 . - . ID=gene-PUW31_09850;Name=PUW31_09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09850 CP118128.1 GeneMarkS-2+ CDS 1996854 1997078 . - 0 ID=cds-WJH10362.1;Parent=gene-PUW31_09850;Dbxref=NCBI_GP:WJH10362.1;Name=WJH10362.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_09850;product=hypothetical protein;protein_id=WJH10362.1;transl_table=11 CP118128.1 Genbank gene 1997281 1998024 . - . ID=gene-PUW31_09855;Name=PUW31_09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09855 CP118128.1 Protein Homology CDS 1997281 1998024 . - 0 ID=cds-WJH10714.1;Parent=gene-PUW31_09855;Dbxref=NCBI_GP:WJH10714.1;Name=WJH10714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460158.1;locus_tag=PUW31_09855;product=DUF3053 domain-containing protein;protein_id=WJH10714.1;transl_table=11 CP118128.1 Genbank gene 1998180 1999139 . - . ID=gene-PUW31_09860;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=PUW31_09860 CP118128.1 Protein Homology CDS 1998180 1999139 . - 0 ID=cds-WJH10363.1;Parent=gene-PUW31_09860;Dbxref=NCBI_GP:WJH10363.1;Name=WJH10363.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460157.1;locus_tag=PUW31_09860;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WJH10363.1;transl_table=11 CP118128.1 Genbank pseudogene 1999713 2002918 . + . ID=gene-PUW31_09865;Name=rne;gbkey=Gene;gene=rne;gene_biotype=pseudogene;locus_tag=PUW31_09865;pseudo=true CP118128.1 Protein Homology CDS 1999713 2002918 . + 0 ID=cds-PUW31_09865;Parent=gene-PUW31_09865;Note=frameshifted;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460156.1;locus_tag=PUW31_09865;product=ribonuclease E;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2003165 2004118 . - . ID=gene-PUW31_09870;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=PUW31_09870 CP118128.1 Protein Homology CDS 2003165 2004118 . - 0 ID=cds-WJH10364.1;Parent=gene-PUW31_09870;Dbxref=NCBI_GP:WJH10364.1;Name=WJH10364.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460155.1;locus_tag=PUW31_09870;product=flagellar hook-associated protein FlgL;protein_id=WJH10364.1;transl_table=11 CP118128.1 Genbank pseudogene 2004133 2005794 . - . ID=gene-PUW31_09875;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=pseudogene;locus_tag=PUW31_09875;pseudo=true CP118128.1 Protein Homology CDS 2004133 2005794 . - 0 ID=cds-PUW31_09875;Parent=gene-PUW31_09875;Note=internal stop;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460154.1;locus_tag=PUW31_09875;product=flagellar hook-associated protein FlgK;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2005859 2006809 . - . ID=gene-PUW31_09880;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=PUW31_09880 CP118128.1 Protein Homology CDS 2005859 2006809 . - 0 ID=cds-WJH10365.1;Parent=gene-PUW31_09880;Dbxref=NCBI_GP:WJH10365.1;Name=WJH10365.1;Ontology_term=GO:0001539,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460153.1;locus_tag=PUW31_09880;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WJH10365.1;transl_table=11 CP118128.1 Genbank pseudogene 2006809 2007906 . - . ID=gene-PUW31_09885;Name=PUW31_09885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_09885;pseudo=true CP118128.1 Protein Homology CDS 2006809 2007906 . - 0 ID=cds-PUW31_09885;Parent=gene-PUW31_09885;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460152.1;locus_tag=PUW31_09885;product=flagellar basal body P-ring protein FlgI;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2007918 2008616 . - . ID=gene-PUW31_09890;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=PUW31_09890 CP118128.1 Protein Homology CDS 2007918 2008616 . - 0 ID=cds-WJH10366.1;Parent=gene-PUW31_09890;Dbxref=NCBI_GP:WJH10366.1;Name=WJH10366.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460151.1;locus_tag=PUW31_09890;product=flagellar basal body L-ring protein FlgH;protein_id=WJH10366.1;transl_table=11 CP118128.1 Genbank gene 2008671 2009453 . - . ID=gene-PUW31_09895;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=PUW31_09895 CP118128.1 Protein Homology CDS 2008671 2009453 . - 0 ID=cds-WJH10367.1;Parent=gene-PUW31_09895;Dbxref=NCBI_GP:WJH10367.1;Name=WJH10367.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=PUW31_09895;product=flagellar basal-body rod protein FlgG;protein_id=WJH10367.1;transl_table=11 CP118128.1 Genbank gene 2009467 2010222 . - . ID=gene-PUW31_09900;Name=PUW31_09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09900 CP118128.1 Protein Homology CDS 2009467 2010222 . - 0 ID=cds-WJH10368.1;Parent=gene-PUW31_09900;Dbxref=NCBI_GP:WJH10368.1;Name=WJH10368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460149.1;locus_tag=PUW31_09900;product=flagellar basal body rod protein FlgF;protein_id=WJH10368.1;transl_table=11 CP118128.1 Genbank gene 2010243 2011454 . - . ID=gene-PUW31_09905;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=PUW31_09905 CP118128.1 Protein Homology CDS 2010243 2011454 . - 0 ID=cds-WJH10369.1;Parent=gene-PUW31_09905;Dbxref=NCBI_GP:WJH10369.1;Name=WJH10369.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460148.1;locus_tag=PUW31_09905;product=flagellar hook protein FlgE;protein_id=WJH10369.1;transl_table=11 CP118128.1 Genbank gene 2011481 2012179 . - . ID=gene-PUW31_09910;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=PUW31_09910 CP118128.1 Protein Homology CDS 2011481 2012179 . - 0 ID=cds-WJH10370.1;Parent=gene-PUW31_09910;Dbxref=NCBI_GP:WJH10370.1;Name=WJH10370.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460147.1;locus_tag=PUW31_09910;product=flagellar hook assembly protein FlgD;protein_id=WJH10370.1;transl_table=11 CP118128.1 Genbank gene 2012191 2012595 . - . ID=gene-PUW31_09915;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=PUW31_09915 CP118128.1 Protein Homology CDS 2012191 2012595 . - 0 ID=cds-WJH10371.1;Parent=gene-PUW31_09915;Dbxref=NCBI_GP:WJH10371.1;Name=WJH10371.1;Ontology_term=GO:0001539,GO:0005198,GO:0009425;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body|0009425||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=PUW31_09915;product=flagellar basal body rod protein FlgC;protein_id=WJH10371.1;transl_table=11 CP118128.1 Genbank gene 2012599 2013015 . - . ID=gene-PUW31_09920;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=PUW31_09920 CP118128.1 Protein Homology CDS 2012599 2013015 . - 0 ID=cds-WJH10372.1;Parent=gene-PUW31_09920;Dbxref=NCBI_GP:WJH10372.1;Name=WJH10372.1;Ontology_term=GO:0001539,GO:0005198,GO:0009429;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C proximal rod|0009429||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460145.1;locus_tag=PUW31_09920;product=flagellar basal body rod protein FlgB;protein_id=WJH10372.1;transl_table=11 CP118128.1 Genbank gene 2013172 2013831 . + . ID=gene-PUW31_09925;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=PUW31_09925 CP118128.1 Protein Homology CDS 2013172 2013831 . + 0 ID=cds-WJH10373.1;Parent=gene-PUW31_09925;Dbxref=NCBI_GP:WJH10373.1;Name=WJH10373.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460144.1;locus_tag=PUW31_09925;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WJH10373.1;transl_table=11 CP118128.1 Genbank gene 2013923 2014216 . + . ID=gene-PUW31_09930;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=PUW31_09930 CP118128.1 Protein Homology CDS 2013923 2014216 . + 0 ID=cds-WJH10374.1;Parent=gene-PUW31_09930;Dbxref=NCBI_GP:WJH10374.1;Name=WJH10374.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460143.1;locus_tag=PUW31_09930;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WJH10374.1;transl_table=11 CP118128.1 Genbank gene 2014221 2014643 . + . ID=gene-PUW31_09935;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=PUW31_09935 CP118128.1 Protein Homology CDS 2014221 2014643 . + 0 ID=cds-WJH10375.1;Parent=gene-PUW31_09935;Dbxref=NCBI_GP:WJH10375.1;Name=WJH10375.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460142.1;locus_tag=PUW31_09935;product=flagella biosynthesis chaperone FlgN;protein_id=WJH10375.1;transl_table=11 CP118128.1 Genbank gene 2014725 2016260 . - . ID=gene-PUW31_09940;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=PUW31_09940 CP118128.1 Protein Homology CDS 2014725 2016260 . - 0 ID=cds-WJH10376.1;Parent=gene-PUW31_09940;Dbxref=NCBI_GP:WJH10376.1;Name=WJH10376.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226258.1;locus_tag=PUW31_09940;product=murein biosynthesis integral membrane protein MurJ;protein_id=WJH10376.1;transl_table=11 CP118128.1 Genbank gene 2016564 2017487 . - . ID=gene-PUW31_09945;Name=PUW31_09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09945 CP118128.1 Protein Homology CDS 2016564 2017487 . - 0 ID=cds-WJH10377.1;Parent=gene-PUW31_09945;Dbxref=NCBI_GP:WJH10377.1;Name=WJH10377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460140.1;locus_tag=PUW31_09945;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WJH10377.1;transl_table=11 CP118128.1 Genbank pseudogene 2017489 2018135 . - . ID=gene-PUW31_09950;Name=PUW31_09950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_09950;pseudo=true CP118128.1 Protein Homology CDS 2017489 2018135 . - 0 ID=cds-PUW31_09950;Parent=gene-PUW31_09950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460139.1;locus_tag=PUW31_09950;product=YceH family protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2018171 2018755 . - . ID=gene-PUW31_09955;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=PUW31_09955 CP118128.1 Protein Homology CDS 2018171 2018755 . - 0 ID=cds-WJH10378.1;Parent=gene-PUW31_09955;Dbxref=NCBI_GP:WJH10378.1;Name=WJH10378.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460138.1;locus_tag=PUW31_09955;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WJH10378.1;transl_table=11 CP118128.1 Genbank gene 2018992 2020200 . + . ID=gene-PUW31_09960;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=PUW31_09960 CP118128.1 Protein Homology CDS 2018992 2020200 . + 0 ID=cds-WJH10379.1;Parent=gene-PUW31_09960;Dbxref=NCBI_GP:WJH10379.1;Name=WJH10379.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460137.1;locus_tag=PUW31_09960;product=multidrug efflux MFS transporter MdtH;protein_id=WJH10379.1;transl_table=11 CP118128.1 Genbank pseudogene 2020264 2020910 . + . ID=gene-PUW31_09965;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=pseudogene;locus_tag=PUW31_09965;pseudo=true CP118128.1 Protein Homology CDS 2020264 2020910 . + 0 ID=cds-PUW31_09965;Parent=gene-PUW31_09965;Note=frameshifted;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460136.1;locus_tag=PUW31_09965;product=glutaredoxin 2;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2021051 2021596 . + . ID=gene-PUW31_09970;Name=PUW31_09970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_09970;pseudo=true CP118128.1 Protein Homology CDS 2021051 2021596 . + 0 ID=cds-PUW31_09970;Parent=gene-PUW31_09970;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415581.1;locus_tag=PUW31_09970;product=lipoprotein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2021701 2022747 . + . ID=gene-PUW31_09975;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=PUW31_09975 CP118128.1 Protein Homology CDS 2021701 2022747 . + 0 ID=cds-WJH10380.1;Parent=gene-PUW31_09975;Dbxref=NCBI_GP:WJH10380.1;Name=WJH10380.1;Ontology_term=GO:0009220,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460134.1;locus_tag=PUW31_09975;product=dihydroorotase;protein_id=WJH10380.1;transl_table=11 CP118128.1 Genbank gene 2022821 2023066 . + . ID=gene-PUW31_09980;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=PUW31_09980 CP118128.1 Protein Homology CDS 2022821 2023066 . + 0 ID=cds-WJH10381.1;Parent=gene-PUW31_09980;Dbxref=NCBI_GP:WJH10381.1;Name=WJH10381.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460133.1;locus_tag=PUW31_09980;product=DNA damage-inducible protein I;protein_id=WJH10381.1;transl_table=11 CP118128.1 Genbank gene 2023356 2023610 . + . ID=gene-PUW31_09985;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=PUW31_09985 CP118128.1 Protein Homology CDS 2023356 2023610 . + 0 ID=cds-WJH10715.1;Parent=gene-PUW31_09985;Dbxref=NCBI_GP:WJH10715.1;Name=WJH10715.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460132.3;locus_tag=PUW31_09985;product=biofilm formation regulator BssS;protein_id=WJH10715.1;transl_table=11 CP118128.1 Genbank gene 2023723 2024841 . + . ID=gene-PUW31_09990;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=PUW31_09990 CP118128.1 Protein Homology CDS 2023723 2024841 . + 0 ID=cds-WJH10382.1;Parent=gene-PUW31_09990;Dbxref=NCBI_GP:WJH10382.1;Name=WJH10382.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460131.1;locus_tag=PUW31_09990;product=N-methyl-L-tryptophan oxidase;protein_id=WJH10382.1;transl_table=11 CP118128.1 Genbank gene 2024882 2024995 . + . ID=gene-PUW31_09995;Name=PUW31_09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_09995 CP118128.1 Protein Homology CDS 2024882 2024995 . + 0 ID=cds-WJH10383.1;Parent=gene-PUW31_09995;Dbxref=NCBI_GP:WJH10383.1;Name=WJH10383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460130.1;locus_tag=PUW31_09995;product=YceO family protein;protein_id=WJH10383.1;transl_table=11 CP118128.1 Genbank gene 2025258 2025830 . + . ID=gene-PUW31_10000;Name=PUW31_10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10000 CP118128.1 Protein Homology CDS 2025258 2025830 . + 0 ID=cds-WJH10384.1;Parent=gene-PUW31_10000;Dbxref=NCBI_GP:WJH10384.1;Name=WJH10384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460129.1;locus_tag=PUW31_10000;product=cytochrome b;protein_id=WJH10384.1;transl_table=11 CP118128.1 Genbank gene 2025827 2026402 . + . ID=gene-PUW31_10005;Name=PUW31_10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10005 CP118128.1 Protein Homology CDS 2025827 2026402 . + 0 ID=cds-WJH10385.1;Parent=gene-PUW31_10005;Dbxref=NCBI_GP:WJH10385.1;Name=WJH10385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460128.1;locus_tag=PUW31_10005;product=YceI family protein;protein_id=WJH10385.1;transl_table=11 CP118128.1 Genbank gene 2026454 2027506 . - . ID=gene-PUW31_10010;Name=PUW31_10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10010 CP118128.1 Protein Homology CDS 2026454 2027506 . - 0 ID=cds-WJH10386.1;Parent=gene-PUW31_10010;Dbxref=NCBI_GP:WJH10386.1;Name=WJH10386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460127.1;locus_tag=PUW31_10010;product=rhodanese-related sulfurtransferase;protein_id=WJH10386.1;transl_table=11 CP118128.1 Genbank gene 2027726 2028646 . + . ID=gene-PUW31_10015;Name=PUW31_10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10015 CP118128.1 Protein Homology CDS 2027726 2028646 . + 0 ID=cds-WJH10387.1;Parent=gene-PUW31_10015;Dbxref=NCBI_GP:WJH10387.1;Name=WJH10387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460126.1;locus_tag=PUW31_10015;product=LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee;protein_id=WJH10387.1;transl_table=11 CP118128.1 Genbank gene 2028801 2030015 . + . ID=gene-PUW31_10020;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=PUW31_10020 CP118128.1 Protein Homology CDS 2028801 2030015 . + 0 ID=cds-WJH10388.1;Parent=gene-PUW31_10020;Dbxref=NCBI_GP:WJH10388.1;Name=WJH10388.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460125.1;locus_tag=PUW31_10020;product=multidrug efflux MFS transporter MdtG;protein_id=WJH10388.1;transl_table=11 CP118128.1 Genbank gene 2030097 2030471 . + . ID=gene-PUW31_10025;Name=PUW31_10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10025 CP118128.1 Protein Homology CDS 2030097 2030471 . + 0 ID=cds-WJH10389.1;Parent=gene-PUW31_10025;Dbxref=NCBI_GP:WJH10389.1;Name=WJH10389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460124.1;locus_tag=PUW31_10025;product=MysB family protein;protein_id=WJH10389.1;transl_table=11 CP118128.1 Genbank gene 2030472 2030699 . - . ID=gene-PUW31_10030;Name=PUW31_10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10030 CP118128.1 Protein Homology CDS 2030472 2030699 . - 0 ID=cds-WJH10390.1;Parent=gene-PUW31_10030;Dbxref=NCBI_GP:WJH10390.1;Name=WJH10390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460123.1;locus_tag=PUW31_10030;product=YceK/YidQ family lipoprotein;protein_id=WJH10390.1;transl_table=11 CP118128.1 Genbank gene 2030773 2033316 . - . ID=gene-PUW31_10035;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=PUW31_10035 CP118128.1 Protein Homology CDS 2030773 2033316 . - 0 ID=cds-WJH10391.1;Parent=gene-PUW31_10035;Dbxref=NCBI_GP:WJH10391.1;Name=WJH10391.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460122.1;locus_tag=PUW31_10035;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WJH10391.1;transl_table=11 CP118128.1 Genbank gene 2033309 2034844 . - . ID=gene-PUW31_10040;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=PUW31_10040 CP118128.1 Protein Homology CDS 2033309 2034844 . - 0 ID=cds-WJH10392.1;Parent=gene-PUW31_10040;Dbxref=NCBI_GP:WJH10392.1;Name=WJH10392.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460121.1;locus_tag=PUW31_10040;product=glucans biosynthesis protein MdoG;protein_id=WJH10392.1;transl_table=11 CP118128.1 Genbank gene 2035116 2036270 . + . ID=gene-PUW31_10045;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=PUW31_10045 CP118128.1 Protein Homology CDS 2035116 2036270 . + 0 ID=cds-WJH10393.1;Parent=gene-PUW31_10045;Dbxref=NCBI_GP:WJH10393.1;Name=WJH10393.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460120.1;locus_tag=PUW31_10045;product=glucans biosynthesis protein MdoC;protein_id=WJH10393.1;transl_table=11 CP118128.1 Genbank gene 2036287 2037774 . - . ID=gene-PUW31_10050;Name=PUW31_10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10050 CP118128.1 Protein Homology CDS 2036287 2037774 . - 0 ID=cds-WJH10394.1;Parent=gene-PUW31_10050;Dbxref=NCBI_GP:WJH10394.1;Name=WJH10394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=PUW31_10050;product=phospholipase D family protein;protein_id=WJH10394.1;transl_table=11 CP118128.1 Genbank gene 2037710 2038249 . - . ID=gene-PUW31_10055;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=PUW31_10055 CP118128.1 Protein Homology CDS 2037710 2038249 . - 0 ID=cds-WJH10395.1;Parent=gene-PUW31_10055;Dbxref=NCBI_GP:WJH10395.1;Name=WJH10395.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460118.1;locus_tag=PUW31_10055;product=O-acetyl-ADP-ribose deacetylase;protein_id=WJH10395.1;transl_table=11 CP118128.1 Genbank gene 2038336 2038656 . - . ID=gene-PUW31_10060;Name=PUW31_10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10060 CP118128.1 Protein Homology CDS 2038336 2038656 . - 0 ID=cds-WJH10396.1;Parent=gene-PUW31_10060;Dbxref=NCBI_GP:WJH10396.1;Name=WJH10396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460117.1;locus_tag=PUW31_10060;product=type 1 fimbrial protein;protein_id=WJH10396.1;transl_table=11 CP118128.1 Genbank gene 2038787 2039113 . - . ID=gene-PUW31_10065;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=PUW31_10065 CP118128.1 Protein Homology CDS 2038787 2039113 . - 0 ID=cds-WJH10397.1;Parent=gene-PUW31_10065;Dbxref=NCBI_GP:WJH10397.1;Name=WJH10397.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460116.1;locus_tag=PUW31_10065;product=curli assembly chaperone CsgC;protein_id=WJH10397.1;transl_table=11 CP118128.1 Genbank gene 2039175 2039630 . - . ID=gene-PUW31_10070;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=PUW31_10070 CP118128.1 Protein Homology CDS 2039175 2039630 . - 0 ID=cds-WJH10398.1;Parent=gene-PUW31_10070;Dbxref=NCBI_GP:WJH10398.1;Name=WJH10398.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460115.1;locus_tag=PUW31_10070;product=curli major subunit CsgA;protein_id=WJH10398.1;transl_table=11 CP118128.1 Genbank gene 2039672 2040127 . - . ID=gene-PUW31_10075;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=PUW31_10075 CP118128.1 Protein Homology CDS 2039672 2040127 . - 0 ID=cds-WJH10399.1;Parent=gene-PUW31_10075;Dbxref=NCBI_GP:WJH10399.1;Name=WJH10399.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460114.1;locus_tag=PUW31_10075;product=curli minor subunit CsgB;protein_id=WJH10399.1;transl_table=11 CP118128.1 Genbank gene 2040881 2041531 . + . ID=gene-PUW31_10080;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=PUW31_10080 CP118128.1 Protein Homology CDS 2040881 2041531 . + 0 ID=cds-WJH10400.1;Parent=gene-PUW31_10080;Dbxref=NCBI_GP:WJH10400.1;Name=WJH10400.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460113.1;locus_tag=PUW31_10080;product=biofilm master transcriptional regulator CsgD;protein_id=WJH10400.1;transl_table=11 CP118128.1 Genbank gene 2041536 2041931 . + . ID=gene-PUW31_10085;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=PUW31_10085 CP118128.1 Protein Homology CDS 2041536 2041931 . + 0 ID=cds-WJH10401.1;Parent=gene-PUW31_10085;Dbxref=NCBI_GP:WJH10401.1;Name=WJH10401.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460112.1;locus_tag=PUW31_10085;product=curli production assembly/transport protein CsgE;protein_id=WJH10401.1;transl_table=11 CP118128.1 Genbank gene 2041958 2042374 . + . ID=gene-PUW31_10090;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=PUW31_10090 CP118128.1 Protein Homology CDS 2041958 2042374 . + 0 ID=cds-WJH10402.1;Parent=gene-PUW31_10090;Dbxref=NCBI_GP:WJH10402.1;Name=WJH10402.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460111.1;locus_tag=PUW31_10090;product=curli production assembly/transport protein CsgF;protein_id=WJH10402.1;transl_table=11 CP118128.1 Genbank gene 2042401 2043234 . + . ID=gene-PUW31_10095;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=PUW31_10095 CP118128.1 Protein Homology CDS 2042401 2043234 . + 0 ID=cds-WJH10403.1;Parent=gene-PUW31_10095;Dbxref=NCBI_GP:WJH10403.1;Name=WJH10403.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460110.1;locus_tag=PUW31_10095;product=curli production assembly/transport protein CsgG;protein_id=WJH10403.1;transl_table=11 CP118128.1 Genbank gene 2043273 2043755 . - . ID=gene-PUW31_10100;Name=PUW31_10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10100 CP118128.1 Protein Homology CDS 2043273 2043755 . - 0 ID=cds-WJH10404.1;Parent=gene-PUW31_10100;Dbxref=NCBI_GP:WJH10404.1;Name=WJH10404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675581.1;locus_tag=PUW31_10100;product=DUF1097 domain-containing protein;protein_id=WJH10404.1;transl_table=11 CP118128.1 Genbank pseudogene 2043856 2044353 . - . ID=gene-PUW31_10105;Name=PUW31_10105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_10105;pseudo=true CP118128.1 Protein Homology CDS 2043856 2044353 . - 0 ID=cds-PUW31_10105;Parent=gene-PUW31_10105;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460108.1;locus_tag=PUW31_10105;product=molecular chaperone;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2044350 2044439 . - . ID=gene-PUW31_10110;Name=PUW31_10110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_10110;pseudo=true CP118128.1 Protein Homology CDS 2044350 2044439 . - 0 ID=cds-PUW31_10110;Parent=gene-PUW31_10110;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460107.1;locus_tag=PUW31_10110;product=phosphatase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2044524 2045462 . - . ID=gene-PUW31_10115;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=PUW31_10115 CP118128.1 Protein Homology CDS 2044524 2045462 . - 0 ID=cds-WJH10405.1;Parent=gene-PUW31_10115;Dbxref=NCBI_GP:WJH10405.1;Name=WJH10405.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase activity|0016618||IEA,glyoxylate reductase (NADP+) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460106.1;locus_tag=PUW31_10115;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WJH10405.1;transl_table=11 CP118128.1 Genbank gene 2045697 2045783 . + . ID=gene-PUW31_10120;Name=PUW31_10120;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_10120 CP118128.1 tRNAscan-SE tRNA 2045697 2045783 . + . ID=rna-PUW31_10120;Parent=gene-PUW31_10120;anticodon=(pos:2045731..2045733);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_10120;product=tRNA-Ser CP118128.1 tRNAscan-SE exon 2045697 2045783 . + . ID=exon-PUW31_10120-1;Parent=rna-PUW31_10120;anticodon=(pos:2045731..2045733);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_10120;product=tRNA-Ser CP118128.1 Genbank gene 2045833 2046040 . + . ID=gene-PUW31_10125;Name=PUW31_10125;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PUW31_10125 CP118128.1 cmsearch ncRNA 2045833 2046040 . + . ID=rna-PUW31_10125;Parent=gene-PUW31_10125;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_10125;product=RtT sRNA CP118128.1 cmsearch exon 2045833 2046040 . + . ID=exon-PUW31_10125-1;Parent=rna-PUW31_10125;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_10125;product=RtT sRNA CP118128.1 Genbank pseudogene 2046288 2046386 . + . ID=gene-PUW31_10130;Name=PUW31_10130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_10130;pseudo=true CP118128.1 Protein Homology CDS 2046288 2046386 . + 0 ID=cds-PUW31_10130;Parent=gene-PUW31_10130;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001607533.1;locus_tag=PUW31_10130;product=integrase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2046469 2046585 . + . ID=gene-PUW31_10135;Name=PUW31_10135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_10135;pseudo=true CP118128.1 Protein Homology CDS 2046469 2046585 . + 0 ID=cds-PUW31_10135;Parent=gene-PUW31_10135;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611504.1;locus_tag=PUW31_10135;product=transposase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2046791 2047813 . - . ID=gene-PUW31_10140;Name=PUW31_10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10140 CP118128.1 Protein Homology CDS 2046791 2047813 . - 0 ID=cds-WJH10716.1;Parent=gene-PUW31_10140;Dbxref=NCBI_GP:WJH10716.1;Name=WJH10716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001028172.1;locus_tag=PUW31_10140;product=IS110-like element ISSaen1 family transposase;protein_id=WJH10716.1;transl_table=11 CP118128.1 Genbank pseudogene 2047880 2048014 . + . ID=gene-PUW31_10145;Name=PUW31_10145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_10145;pseudo=true CP118128.1 Protein Homology CDS 2047880 2048014 . + 0 ID=cds-PUW31_10145;Parent=gene-PUW31_10145;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611504.1;locus_tag=PUW31_10145;product=transposase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2048275 2049093 . - . ID=gene-PUW31_10150;Name=PUW31_10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10150 CP118128.1 Protein Homology CDS 2048275 2049093 . - 0 ID=cds-WJH10406.1;Parent=gene-PUW31_10150;Dbxref=NCBI_GP:WJH10406.1;Name=WJH10406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176774.1;locus_tag=PUW31_10150;product=hypothetical protein;protein_id=WJH10406.1;transl_table=11 CP118128.1 Genbank gene 2050108 2050197 . - . ID=gene-PUW31_10155;Name=PUW31_10155;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_10155 CP118128.1 tRNAscan-SE tRNA 2050108 2050197 . - . ID=rna-PUW31_10155;Parent=gene-PUW31_10155;anticodon=(pos:complement(2050161..2050163));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_10155;product=tRNA-Ser CP118128.1 tRNAscan-SE exon 2050108 2050197 . - . ID=exon-PUW31_10155-1;Parent=rna-PUW31_10155;anticodon=(pos:complement(2050161..2050163));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_10155;product=tRNA-Ser CP118128.1 Genbank gene 2050286 2051083 . + . ID=gene-PUW31_10160;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=PUW31_10160 CP118128.1 Protein Homology CDS 2050286 2051083 . + 0 ID=cds-WJH10407.1;Parent=gene-PUW31_10160;Dbxref=NCBI_GP:WJH10407.1;Name=WJH10407.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460951.1;locus_tag=PUW31_10160;product=DgsA anti-repressor MtfA;protein_id=WJH10407.1;transl_table=11 CP118128.1 Genbank gene 2051184 2051259 . + . ID=gene-PUW31_10165;Name=PUW31_10165;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_10165 CP118128.1 tRNAscan-SE tRNA 2051184 2051259 . + . ID=rna-PUW31_10165;Parent=gene-PUW31_10165;anticodon=(pos:2051217..2051219);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_10165;product=tRNA-Asn CP118128.1 tRNAscan-SE exon 2051184 2051259 . + . ID=exon-PUW31_10165-1;Parent=rna-PUW31_10165;anticodon=(pos:2051217..2051219);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_10165;product=tRNA-Asn CP118128.1 Genbank pseudogene 2051427 2051732 . + . ID=gene-PUW31_10170;Name=PUW31_10170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_10170;pseudo=true CP118128.1 Protein Homology CDS 2051427 2051732 . + 0 ID=cds-PUW31_10170;Parent=gene-PUW31_10170;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751368.1;locus_tag=PUW31_10170;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2052154 2052229 . + . ID=gene-PUW31_10175;Name=PUW31_10175;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_10175 CP118128.1 tRNAscan-SE tRNA 2052154 2052229 . + . ID=rna-PUW31_10175;Parent=gene-PUW31_10175;anticodon=(pos:2052187..2052189);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_10175;product=tRNA-Asn CP118128.1 tRNAscan-SE exon 2052154 2052229 . + . ID=exon-PUW31_10175-1;Parent=rna-PUW31_10175;anticodon=(pos:2052187..2052189);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_10175;product=tRNA-Asn CP118128.1 Genbank gene 2052409 2053683 . + . ID=gene-PUW31_10180;Name=PUW31_10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10180 CP118128.1 Protein Homology CDS 2052409 2053683 . + 0 ID=cds-WJH10408.1;Parent=gene-PUW31_10180;Dbxref=NCBI_GP:WJH10408.1;Name=WJH10408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751368.1;locus_tag=PUW31_10180;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WJH10408.1;transl_table=11 CP118128.1 Genbank gene 2053773 2054006 . - . ID=gene-PUW31_10185;Name=PUW31_10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10185 CP118128.1 Protein Homology CDS 2053773 2054006 . - 0 ID=cds-WJH10409.1;Parent=gene-PUW31_10185;Dbxref=NCBI_GP:WJH10409.1;Name=WJH10409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747333.1;locus_tag=PUW31_10185;product=hypothetical protein;protein_id=WJH10409.1;transl_table=11 CP118128.1 Genbank gene 2054485 2055321 . - . ID=gene-PUW31_10190;Name=PUW31_10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10190 CP118128.1 Protein Homology CDS 2054485 2055321 . - 0 ID=cds-WJH10410.1;Parent=gene-PUW31_10190;Dbxref=NCBI_GP:WJH10410.1;Name=WJH10410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000064127.1;locus_tag=PUW31_10190;product=hypothetical protein;protein_id=WJH10410.1;transl_table=11 CP118128.1 Genbank gene 2055343 2055906 . - . ID=gene-PUW31_10195;Name=PUW31_10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10195 CP118128.1 Protein Homology CDS 2055343 2055906 . - 0 ID=cds-WJH10411.1;Parent=gene-PUW31_10195;Dbxref=NCBI_GP:WJH10411.1;Name=WJH10411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000072670.1;locus_tag=PUW31_10195;product=hypothetical protein;protein_id=WJH10411.1;transl_table=11 CP118128.1 Genbank gene 2056317 2057198 . + . ID=gene-PUW31_10200;Name=PUW31_10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10200 CP118128.1 Protein Homology CDS 2056317 2057198 . + 0 ID=cds-WJH10412.1;Parent=gene-PUW31_10200;Dbxref=NCBI_GP:WJH10412.1;Name=WJH10412.1;Ontology_term=GO:0007165,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000028416.1;locus_tag=PUW31_10200;product=TIR domain-containing protein;protein_id=WJH10412.1;transl_table=11 CP118128.1 Genbank pseudogene 2057426 2057758 . - . ID=gene-PUW31_10205;Name=PUW31_10205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_10205;pseudo=true CP118128.1 Protein Homology CDS 2057426 2057758 . - 0 ID=cds-PUW31_10205;Parent=gene-PUW31_10205;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592083.1;locus_tag=PUW31_10205;product=pilus assembly protein PilV;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2057772 2059610 . - . ID=gene-PUW31_10210;Name=PUW31_10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10210 CP118128.1 Protein Homology CDS 2057772 2059610 . - 0 ID=cds-WJH10413.1;Parent=gene-PUW31_10210;Dbxref=NCBI_GP:WJH10413.1;Name=WJH10413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001127942.1;locus_tag=PUW31_10210;product=tail fiber protein;protein_id=WJH10413.1;transl_table=11 CP118128.1 Genbank gene 2059626 2060087 . - . ID=gene-PUW31_10215;Name=PUW31_10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10215 CP118128.1 Protein Homology CDS 2059626 2060087 . - 0 ID=cds-WJH10414.1;Parent=gene-PUW31_10215;Dbxref=NCBI_GP:WJH10414.1;Name=WJH10414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000243510.1;locus_tag=PUW31_10215;product=type 4 pilus major pilin;protein_id=WJH10414.1;transl_table=11 CP118128.1 Genbank pseudogene 2060495 2060801 . - . ID=gene-PUW31_10220;Name=PUW31_10220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_10220;pseudo=true CP118128.1 Protein Homology CDS 2060495 2060801 . - 0 ID=cds-PUW31_10220;Parent=gene-PUW31_10220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368354.1;locus_tag=PUW31_10220;product=conjugal transfer protein TraD;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2061438 2062958 . + . ID=gene-PUW31_10225;Name=mobQ;gbkey=Gene;gene=mobQ;gene_biotype=protein_coding;locus_tag=PUW31_10225 CP118128.1 Protein Homology CDS 2061438 2062958 . + 0 ID=cds-WJH10415.1;Parent=gene-PUW31_10225;Dbxref=NCBI_GP:WJH10415.1;Name=WJH10415.1;gbkey=CDS;gene=mobQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000964095.1;locus_tag=PUW31_10225;product=MobQ family relaxase;protein_id=WJH10415.1;transl_table=11 CP118128.1 Genbank gene 2063170 2063871 . - . ID=gene-PUW31_10230;Name=PUW31_10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10230 CP118128.1 Protein Homology CDS 2063170 2063871 . - 0 ID=cds-WJH10416.1;Parent=gene-PUW31_10230;Dbxref=NCBI_GP:WJH10416.1;Name=WJH10416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001732467.1;locus_tag=PUW31_10230;product=DUF2971 domain-containing protein;protein_id=WJH10416.1;transl_table=11 CP118128.1 Genbank gene 2064057 2064320 . - . ID=gene-PUW31_10235;Name=PUW31_10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10235 CP118128.1 Protein Homology CDS 2064057 2064320 . - 0 ID=cds-WJH10417.1;Parent=gene-PUW31_10235;Dbxref=NCBI_GP:WJH10417.1;Name=WJH10417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764615.1;locus_tag=PUW31_10235;product=hypothetical protein;protein_id=WJH10417.1;transl_table=11 CP118128.1 Genbank gene 2064331 2064861 . - . ID=gene-PUW31_10240;Name=PUW31_10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10240 CP118128.1 Protein Homology CDS 2064331 2064861 . - 0 ID=cds-WJH10418.1;Parent=gene-PUW31_10240;Dbxref=NCBI_GP:WJH10418.1;Name=WJH10418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608353.1;locus_tag=PUW31_10240;product=lipoprotein;protein_id=WJH10418.1;transl_table=11 CP118128.1 Genbank gene 2065296 2065769 . + . ID=gene-PUW31_10245;Name=PUW31_10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10245 CP118128.1 Protein Homology CDS 2065296 2065769 . + 0 ID=cds-WJH10419.1;Parent=gene-PUW31_10245;Dbxref=NCBI_GP:WJH10419.1;Name=WJH10419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001351134.1;locus_tag=PUW31_10245;product=DUF4755 domain-containing protein;protein_id=WJH10419.1;transl_table=11 CP118128.1 Genbank gene 2065802 2066179 . + . ID=gene-PUW31_10250;Name=PUW31_10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10250 CP118128.1 Protein Homology CDS 2065802 2066179 . + 0 ID=cds-WJH10420.1;Parent=gene-PUW31_10250;Dbxref=NCBI_GP:WJH10420.1;Name=WJH10420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734570.1;locus_tag=PUW31_10250;product=hypothetical protein;protein_id=WJH10420.1;transl_table=11 CP118128.1 Genbank gene 2066257 2067867 . - . ID=gene-PUW31_10255;Name=PUW31_10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10255 CP118128.1 Protein Homology CDS 2066257 2067867 . - 0 ID=cds-WJH10421.1;Parent=gene-PUW31_10255;Dbxref=NCBI_GP:WJH10421.1;Name=WJH10421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000276246.1;locus_tag=PUW31_10255;product=class I SAM-dependent methyltransferase;protein_id=WJH10421.1;transl_table=11 CP118128.1 Genbank gene 2067919 2068881 . - . ID=gene-PUW31_10260;Name=PUW31_10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10260 CP118128.1 Protein Homology CDS 2067919 2068881 . - 0 ID=cds-WJH10422.1;Parent=gene-PUW31_10260;Dbxref=NCBI_GP:WJH10422.1;Name=WJH10422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000399004.1;locus_tag=PUW31_10260;product=hypothetical protein;protein_id=WJH10422.1;transl_table=11 CP118128.1 Genbank gene 2068937 2069323 . - . ID=gene-PUW31_10265;Name=PUW31_10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10265 CP118128.1 Protein Homology CDS 2068937 2069323 . - 0 ID=cds-WJH10423.1;Parent=gene-PUW31_10265;Dbxref=NCBI_GP:WJH10423.1;Name=WJH10423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001226498.1;locus_tag=PUW31_10265;product=hypothetical protein;protein_id=WJH10423.1;transl_table=11 CP118128.1 Genbank gene 2069408 2069677 . - . ID=gene-PUW31_10270;Name=PUW31_10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10270 CP118128.1 Protein Homology CDS 2069408 2069677 . - 0 ID=cds-WJH10424.1;Parent=gene-PUW31_10270;Dbxref=NCBI_GP:WJH10424.1;Name=WJH10424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001059618.1;locus_tag=PUW31_10270;product=hypothetical protein;protein_id=WJH10424.1;transl_table=11 CP118128.1 Genbank pseudogene 2071036 2071769 . + . ID=gene-PUW31_10275;Name=PUW31_10275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_10275;pseudo=true CP118128.1 Protein Homology CDS 2071036 2071769 . + 0 ID=cds-PUW31_10275;Parent=gene-PUW31_10275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004860215.1;locus_tag=PUW31_10275;product=DNA-binding protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2071800 2072591 . + . ID=gene-PUW31_10280;Name=PUW31_10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10280 CP118128.1 Protein Homology CDS 2071800 2072591 . + 0 ID=cds-WJH10425.1;Parent=gene-PUW31_10280;Dbxref=NCBI_GP:WJH10425.1;Name=WJH10425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000735917.1;locus_tag=PUW31_10280;product=hypothetical protein;protein_id=WJH10425.1;transl_table=11 CP118128.1 Genbank gene 2072677 2073156 . + . ID=gene-PUW31_10285;Name=PUW31_10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10285 CP118128.1 Protein Homology CDS 2072677 2073156 . + 0 ID=cds-WJH10426.1;Parent=gene-PUW31_10285;Dbxref=NCBI_GP:WJH10426.1;Name=WJH10426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001233373.1;locus_tag=PUW31_10285;product=DUF4756 family protein;protein_id=WJH10426.1;transl_table=11 CP118128.1 Genbank gene 2073317 2073721 . + . ID=gene-PUW31_10290;Name=PUW31_10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10290 CP118128.1 Protein Homology CDS 2073317 2073721 . + 0 ID=cds-WJH10427.1;Parent=gene-PUW31_10290;Dbxref=NCBI_GP:WJH10427.1;Name=WJH10427.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519859.1;locus_tag=PUW31_10290;product=H-NS family nucleoid-associated regulatory protein;protein_id=WJH10427.1;transl_table=11 CP118128.1 Genbank pseudogene 2073769 2074045 . + . ID=gene-PUW31_10295;Name=PUW31_10295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_10295;pseudo=true CP118128.1 Protein Homology CDS 2073769 2074045 . + 0 ID=cds-PUW31_10295;Parent=gene-PUW31_10295;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=PUW31_10295;product=IS481 family transposase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2074137 2074685 . - . ID=gene-PUW31_10300;Name=PUW31_10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10300 CP118128.1 Protein Homology CDS 2074137 2074685 . - 0 ID=cds-WJH10428.1;Parent=gene-PUW31_10300;Dbxref=NCBI_GP:WJH10428.1;Name=WJH10428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746429.1;locus_tag=PUW31_10300;product=SLATT domain-containing protein;protein_id=WJH10428.1;transl_table=11 CP118128.1 Genbank gene 2074750 2076021 . - . ID=gene-PUW31_10305;Name=PUW31_10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10305 CP118128.1 Protein Homology CDS 2074750 2076021 . - 0 ID=cds-WJH10429.1;Parent=gene-PUW31_10305;Dbxref=NCBI_GP:WJH10429.1;Name=WJH10429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102011.1;locus_tag=PUW31_10305;product=nucleotidyltransferase;protein_id=WJH10429.1;transl_table=11 CP118128.1 Genbank gene 2076267 2076563 . - . ID=gene-PUW31_10310;Name=PUW31_10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10310 CP118128.1 Protein Homology CDS 2076267 2076563 . - 0 ID=cds-WJH10430.1;Parent=gene-PUW31_10310;Dbxref=NCBI_GP:WJH10430.1;Name=WJH10430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001091325.1;locus_tag=PUW31_10310;product=hypothetical protein;protein_id=WJH10430.1;transl_table=11 CP118128.1 Genbank gene 2076608 2076898 . - . ID=gene-PUW31_10315;Name=PUW31_10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10315 CP118128.1 Protein Homology CDS 2076608 2076898 . - 0 ID=cds-WJH10431.1;Parent=gene-PUW31_10315;Dbxref=NCBI_GP:WJH10431.1;Name=WJH10431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524933.1;locus_tag=PUW31_10315;product=hypothetical protein;protein_id=WJH10431.1;transl_table=11 CP118128.1 Genbank gene 2076980 2077198 . - . ID=gene-PUW31_10320;Name=PUW31_10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10320 CP118128.1 Protein Homology CDS 2076980 2077198 . - 0 ID=cds-WJH10432.1;Parent=gene-PUW31_10320;Dbxref=NCBI_GP:WJH10432.1;Name=WJH10432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000240778.1;locus_tag=PUW31_10320;product=AlpA family transcriptional regulator;protein_id=WJH10432.1;transl_table=11 CP118128.1 Genbank pseudogene 2077349 2078223 . - . ID=gene-PUW31_10325;Name=PUW31_10325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_10325;pseudo=true CP118128.1 Protein Homology CDS 2077349 2078223 . - 0 ID=cds-PUW31_10325;Parent=gene-PUW31_10325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000166882.1;locus_tag=PUW31_10325;product=DUF6387 family protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2078766 2079290 . + . ID=gene-PUW31_10330;Name=PUW31_10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10330 CP118128.1 Protein Homology CDS 2078766 2079290 . + 0 ID=cds-WJH10433.1;Parent=gene-PUW31_10330;Dbxref=NCBI_GP:WJH10433.1;Name=WJH10433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460952.1;locus_tag=PUW31_10330;product=peptidase;protein_id=WJH10433.1;transl_table=11 CP118128.1 Genbank pseudogene 2079770 2080237 . + . ID=gene-PUW31_10335;Name=PUW31_10335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_10335;pseudo=true CP118128.1 Protein Homology CDS 2079770 2080237 . + 0 ID=cds-PUW31_10335;Parent=gene-PUW31_10335;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517119.1;locus_tag=PUW31_10335;product=phage integrase N-terminal domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2080323 2080601 . + . ID=gene-PUW31_10340;Name=PUW31_10340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_10340;pseudo=true CP118128.1 Protein Homology CDS 2080323 2080601 . + 0 ID=cds-PUW31_10340;Parent=gene-PUW31_10340;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000950586.1;locus_tag=PUW31_10340;product=transposase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2081285 2082979 . + . ID=gene-PUW31_10345;Name=PUW31_10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10345 CP118128.1 Protein Homology CDS 2081285 2082979 . + 0 ID=cds-WJH10717.1;Parent=gene-PUW31_10345;Dbxref=NCBI_GP:WJH10717.1;Name=WJH10717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460954.1;locus_tag=PUW31_10345;product=SEL1-like repeat protein;protein_id=WJH10717.1;transl_table=11 CP118128.1 Genbank gene 2083036 2084766 . + . ID=gene-PUW31_10350;Name=PUW31_10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10350 CP118128.1 Protein Homology CDS 2083036 2084766 . + 0 ID=cds-WJH10434.1;Parent=gene-PUW31_10350;Dbxref=NCBI_GP:WJH10434.1;Name=WJH10434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460955.1;locus_tag=PUW31_10350;product=hypothetical protein;protein_id=WJH10434.1;transl_table=11 CP118128.1 Genbank pseudogene 2084824 2084928 . - . ID=gene-PUW31_10355;Name=PUW31_10355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_10355;pseudo=true CP118128.1 Protein Homology CDS 2084824 2084928 . - 0 ID=cds-PUW31_10355;Parent=gene-PUW31_10355;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=PUW31_10355;product=DUF520 family protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2084976 2085149 . + . ID=gene-PUW31_10360;Name=PUW31_10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10360 CP118128.1 Protein Homology CDS 2084976 2085149 . + 0 ID=cds-WJH10435.1;Parent=gene-PUW31_10360;Dbxref=NCBI_GP:WJH10435.1;Name=WJH10435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000957538.1;locus_tag=PUW31_10360;product=hypothetical protein;protein_id=WJH10435.1;transl_table=11 CP118128.1 Genbank pseudogene 2085330 2085428 . + . ID=gene-PUW31_10365;Name=PUW31_10365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_10365;pseudo=true CP118128.1 Protein Homology CDS 2085330 2085428 . + 0 ID=cds-PUW31_10365;Parent=gene-PUW31_10365;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012885291.1;locus_tag=PUW31_10365;product=DUF4102 domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2085671 2087125 . - . ID=gene-PUW31_10370;Name=PUW31_10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10370 CP118128.1 Protein Homology CDS 2085671 2087125 . - 0 ID=cds-WJH10436.1;Parent=gene-PUW31_10370;Dbxref=NCBI_GP:WJH10436.1;Name=WJH10436.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460956.1;locus_tag=PUW31_10370;product=AMP nucleosidase;protein_id=WJH10436.1;transl_table=11 CP118128.1 Genbank gene 2087171 2087332 . + . ID=gene-PUW31_10375;Name=PUW31_10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10375 CP118128.1 Protein Homology CDS 2087171 2087332 . + 0 ID=cds-WJH10437.1;Parent=gene-PUW31_10375;Dbxref=NCBI_GP:WJH10437.1;Name=WJH10437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448416.1;locus_tag=PUW31_10375;product=cytoplasmic protein;protein_id=WJH10437.1;transl_table=11 CP118128.1 Genbank gene 2087321 2087647 . - . ID=gene-PUW31_10380;Name=PUW31_10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10380 CP118128.1 Protein Homology CDS 2087321 2087647 . - 0 ID=cds-WJH10438.1;Parent=gene-PUW31_10380;Dbxref=NCBI_GP:WJH10438.1;Name=WJH10438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460958.1;locus_tag=PUW31_10380;product=DUF1493 family protein;protein_id=WJH10438.1;transl_table=11 CP118128.1 Genbank pseudogene 2087641 2088104 . - . ID=gene-PUW31_10385;Name=PUW31_10385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_10385;pseudo=true CP118128.1 Protein Homology CDS 2087641 2088104 . - 0 ID=cds-PUW31_10385;Parent=gene-PUW31_10385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211098.1;locus_tag=PUW31_10385;product=hypothetical protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2088524 2088599 . - . ID=gene-PUW31_10390;Name=PUW31_10390;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_10390 CP118128.1 tRNAscan-SE tRNA 2088524 2088599 . - . ID=rna-PUW31_10390;Parent=gene-PUW31_10390;anticodon=(pos:complement(2088564..2088566));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_10390;product=tRNA-Asn CP118128.1 tRNAscan-SE exon 2088524 2088599 . - . ID=exon-PUW31_10390-1;Parent=rna-PUW31_10390;anticodon=(pos:complement(2088564..2088566));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_10390;product=tRNA-Asn CP118128.1 Genbank gene 2088740 2090197 . - . ID=gene-PUW31_10395;Name=PUW31_10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10395 CP118128.1 Protein Homology CDS 2088740 2090197 . - 0 ID=cds-WJH10718.1;Parent=gene-PUW31_10395;Dbxref=NCBI_GP:WJH10718.1;Name=WJH10718.1;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460959.1;locus_tag=PUW31_10395;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=WJH10718.1;transl_table=11 CP118128.1 Genbank gene 2090357 2090432 . + . ID=gene-PUW31_10400;Name=PUW31_10400;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_10400 CP118128.1 tRNAscan-SE tRNA 2090357 2090432 . + . ID=rna-PUW31_10400;Parent=gene-PUW31_10400;anticodon=(pos:2090390..2090392);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_10400;product=tRNA-Asn CP118128.1 tRNAscan-SE exon 2090357 2090432 . + . ID=exon-PUW31_10400-1;Parent=rna-PUW31_10400;anticodon=(pos:2090390..2090392);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_10400;product=tRNA-Asn CP118128.1 Genbank gene 2090657 2091586 . - . ID=gene-PUW31_10405;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=PUW31_10405 CP118128.1 Protein Homology CDS 2090657 2091586 . - 0 ID=cds-WJH10439.1;Parent=gene-PUW31_10405;Dbxref=NCBI_GP:WJH10439.1;Name=WJH10439.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460960.1;locus_tag=PUW31_10405;product=L%2CD-transpeptidase;protein_id=WJH10439.1;transl_table=11 CP118128.1 Genbank gene 2091664 2092734 . - . ID=gene-PUW31_10410;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=PUW31_10410 CP118128.1 Protein Homology CDS 2091664 2092734 . - 0 ID=cds-WJH10440.1;Parent=gene-PUW31_10410;Dbxref=NCBI_GP:WJH10440.1;Name=WJH10440.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460961.1;locus_tag=PUW31_10410;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WJH10440.1;transl_table=11 CP118128.1 Genbank gene 2092761 2093504 . - . ID=gene-PUW31_10415;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=PUW31_10415 CP118128.1 Protein Homology CDS 2092761 2093504 . - 0 ID=cds-WJH10441.1;Parent=gene-PUW31_10415;Dbxref=NCBI_GP:WJH10441.1;Name=WJH10441.1;Ontology_term=GO:0009236,GO:0008818;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460962.1;locus_tag=PUW31_10415;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WJH10441.1;transl_table=11 CP118128.1 Genbank gene 2093501 2094046 . - . ID=gene-PUW31_10420;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=PUW31_10420 CP118128.1 Protein Homology CDS 2093501 2094046 . - 0 ID=cds-WJH10442.1;Parent=gene-PUW31_10420;Dbxref=NCBI_GP:WJH10442.1;Name=WJH10442.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460963.1;locus_tag=PUW31_10420;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WJH10442.1;transl_table=11 CP118128.1 Genbank gene 2094043 2095557 . - . ID=gene-PUW31_10425;Name=PUW31_10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10425 CP118128.1 Protein Homology CDS 2094043 2095557 . - 0 ID=cds-WJH10443.1;Parent=gene-PUW31_10425;Dbxref=NCBI_GP:WJH10443.1;Name=WJH10443.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460964.1;locus_tag=PUW31_10425;product=cobyric acid synthase;protein_id=WJH10443.1;transl_table=11 CP118128.1 Genbank pseudogene 2095554 2096368 . - . ID=gene-PUW31_10430;Name=PUW31_10430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_10430;pseudo=true CP118128.1 Protein Homology CDS 2095554 2096368 . - 0 ID=cds-PUW31_10430;Parent=gene-PUW31_10430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460965.1;locus_tag=PUW31_10430;product=energy-coupling factor ABC transporter ATP-binding protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2096377 2097054 . - . ID=gene-PUW31_10435;Name=PUW31_10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10435 CP118128.1 Protein Homology CDS 2096377 2097054 . - 0 ID=cds-WJH10719.1;Parent=gene-PUW31_10435;Dbxref=NCBI_GP:WJH10719.1;Name=WJH10719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460966.1;locus_tag=PUW31_10435;product=energy-coupling factor ABC transporter transmembrane protein;protein_id=WJH10719.1;transl_table=11 CP118128.1 Genbank gene 2097041 2097322 . - . ID=gene-PUW31_10440;Name=PUW31_10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10440 CP118128.1 Protein Homology CDS 2097041 2097322 . - 0 ID=cds-WJH10444.1;Parent=gene-PUW31_10440;Dbxref=NCBI_GP:WJH10444.1;Name=WJH10444.1;Ontology_term=GO:0006824,GO:0009236,GO:0015087,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460967.1;locus_tag=PUW31_10440;product=energy-coupling factor ABC transporter substrate-binding protein;protein_id=WJH10444.1;transl_table=11 CP118128.1 Genbank gene 2097324 2098061 . - . ID=gene-PUW31_10445;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=PUW31_10445 CP118128.1 Protein Homology CDS 2097324 2098061 . - 0 ID=cds-WJH10445.1;Parent=gene-PUW31_10445;Dbxref=NCBI_GP:WJH10445.1;Name=WJH10445.1;Ontology_term=GO:0009236;gbkey=CDS;gene=cbiM;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=PUW31_10445;product=cobalt ECF transporter S component CbiM;protein_id=WJH10445.1;transl_table=11 CP118128.1 Genbank gene 2098058 2098771 . - . ID=gene-PUW31_10450;Name=PUW31_10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10450 CP118128.1 Protein Homology CDS 2098058 2098771 . - 0 ID=cds-WJH10446.1;Parent=gene-PUW31_10450;Dbxref=NCBI_GP:WJH10446.1;Name=WJH10446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460969.1;locus_tag=PUW31_10450;product=cobalt-factor II C(20)-methyltransferase;protein_id=WJH10446.1;transl_table=11 CP118128.1 Genbank gene 2098768 2099562 . - . ID=gene-PUW31_10455;Name=PUW31_10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10455 CP118128.1 Protein Homology CDS 2098768 2099562 . - 0 ID=cds-WJH10447.1;Parent=gene-PUW31_10455;Dbxref=NCBI_GP:WJH10447.1;Name=WJH10447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460970.1;locus_tag=PUW31_10455;product=sirohydrochlorin cobaltochelatase;protein_id=WJH10447.1;transl_table=11 CP118128.1 Genbank gene 2099565 2100356 . - . ID=gene-PUW31_10460;Name=PUW31_10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10460 CP118128.1 Protein Homology CDS 2099565 2100356 . - 0 ID=cds-WJH10448.1;Parent=gene-PUW31_10460;Dbxref=NCBI_GP:WJH10448.1;Name=WJH10448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460971.1;locus_tag=PUW31_10460;product=cobalt-precorrin-6A reductase;protein_id=WJH10448.1;transl_table=11 CP118128.1 Genbank gene 2100353 2101078 . - . ID=gene-PUW31_10465;Name=PUW31_10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10465 CP118128.1 Protein Homology CDS 2100353 2101078 . - 0 ID=cds-WJH10449.1;Parent=gene-PUW31_10465;Dbxref=NCBI_GP:WJH10449.1;Name=WJH10449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460972.1;locus_tag=PUW31_10465;product=precorrin-3B C(17)-methyltransferase;protein_id=WJH10449.1;transl_table=11 CP118128.1 Genbank gene 2101078 2102133 . - . ID=gene-PUW31_10470;Name=cbiG;gbkey=Gene;gene=cbiG;gene_biotype=protein_coding;locus_tag=PUW31_10470 CP118128.1 Protein Homology CDS 2101078 2102133 . - 0 ID=cds-WJH10450.1;Parent=gene-PUW31_10470;Dbxref=NCBI_GP:WJH10450.1;Name=WJH10450.1;gbkey=CDS;gene=cbiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460973.1;locus_tag=PUW31_10470;product=cobalt-precorrin 5A hydrolase;protein_id=WJH10450.1;transl_table=11 CP118128.1 Genbank gene 2102114 2102887 . - . ID=gene-PUW31_10475;Name=PUW31_10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10475 CP118128.1 Protein Homology CDS 2102114 2102887 . - 0 ID=cds-WJH10451.1;Parent=gene-PUW31_10475;Dbxref=NCBI_GP:WJH10451.1;Name=WJH10451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460974.1;locus_tag=PUW31_10475;product=cobalt-precorrin-4 methyltransferase;protein_id=WJH10451.1;transl_table=11 CP118128.1 Genbank gene 2102871 2103449 . - . ID=gene-PUW31_10480;Name=PUW31_10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10480 CP118128.1 Protein Homology CDS 2102871 2103449 . - 0 ID=cds-WJH10452.1;Parent=gene-PUW31_10480;Dbxref=NCBI_GP:WJH10452.1;Name=WJH10452.1;Ontology_term=GO:0009236,GO:0008276;gbkey=CDS;go_function=protein methyltransferase activity|0008276||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460975.1;locus_tag=PUW31_10480;product=decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=WJH10452.1;transl_table=11 CP118128.1 Genbank gene 2103439 2104044 . - . ID=gene-PUW31_10485;Name=PUW31_10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10485 CP118128.1 Protein Homology CDS 2103439 2104044 . - 0 ID=cds-WJH10453.1;Parent=gene-PUW31_10485;Dbxref=NCBI_GP:WJH10453.1;Name=WJH10453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460976.1;locus_tag=PUW31_10485;product=cobalt-precorrin-7 (C(5))-methyltransferase;protein_id=WJH10453.1;transl_table=11 CP118128.1 Genbank pseudogene 2104038 2105176 . - . ID=gene-PUW31_10490;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=pseudogene;locus_tag=PUW31_10490;pseudo=true CP118128.1 Protein Homology CDS 2104038 2105176 . - 0 ID=cds-PUW31_10490;Parent=gene-PUW31_10490;Note=frameshifted%3B internal stop;Ontology_term=GO:0009236,GO:0005737;gbkey=CDS;gene=cbiD;go_component=cytoplasm|0005737||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460977.1;locus_tag=PUW31_10490;product=cobalt-precorrin-5B (C(1))-methyltransferase CbiD;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2105176 2105807 . - . ID=gene-PUW31_10495;Name=PUW31_10495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_10495;pseudo=true CP118128.1 Protein Homology CDS 2105176 2105807 . - 0 ID=cds-PUW31_10495;Parent=gene-PUW31_10495;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460978.1;locus_tag=PUW31_10495;product=cobalt-precorrin-8 methylmutase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2105818 2106771 . - . ID=gene-PUW31_10500;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=PUW31_10500 CP118128.1 Protein Homology CDS 2105818 2106771 . - 0 ID=cds-WJH10454.1;Parent=gene-PUW31_10500;Dbxref=NCBI_GP:WJH10454.1;Name=WJH10454.1;Ontology_term=GO:0009236,GO:0016880;gbkey=CDS;gene=cbiB;go_function=acid-ammonia (or amide) ligase activity|0016880||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460979.1;locus_tag=PUW31_10500;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=WJH10454.1;transl_table=11 CP118128.1 Genbank gene 2106768 2108147 . - . ID=gene-PUW31_10505;Name=PUW31_10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10505 CP118128.1 Protein Homology CDS 2106768 2108147 . - 0 ID=cds-WJH10455.1;Parent=gene-PUW31_10505;Dbxref=NCBI_GP:WJH10455.1;Name=WJH10455.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460980.1;locus_tag=PUW31_10505;product=cobyrinate a%2Cc-diamide synthase;protein_id=WJH10455.1;transl_table=11 CP118128.1 cmsearch riboswitch 2108244 2108419 . - . ID=id-CP118128.1:2108244..2108419;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118128.1 Genbank pseudogene 2108744 2109638 . - . ID=gene-PUW31_10510;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=pseudogene;locus_tag=PUW31_10510;pseudo=true CP118128.1 Protein Homology CDS 2108744 2109638 . - 0 ID=cds-PUW31_10510;Parent=gene-PUW31_10510;Note=frameshifted;gbkey=CDS;gene=pocR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460981.1;locus_tag=PUW31_10510;product=regulatory protein PocR;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2109855 2110649 . - . ID=gene-PUW31_10515;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=PUW31_10515 CP118128.1 Protein Homology CDS 2109855 2110649 . - 0 ID=cds-WJH10720.1;Parent=gene-PUW31_10515;Dbxref=NCBI_GP:WJH10720.1;Name=WJH10720.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460982.1;locus_tag=PUW31_10515;product=propanediol diffusion facilitator PduF;protein_id=WJH10720.1;transl_table=11 CP118128.1 Genbank gene 2111174 2111458 . + . ID=gene-PUW31_10520;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=PUW31_10520 CP118128.1 Protein Homology CDS 2111174 2111458 . + 0 ID=cds-WJH10456.1;Parent=gene-PUW31_10520;Dbxref=NCBI_GP:WJH10456.1;Name=WJH10456.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460983.1;locus_tag=PUW31_10520;product=propanediol utilization microcompartment protein PduA;protein_id=WJH10456.1;transl_table=11 CP118128.1 Genbank gene 2111455 2112267 . + . ID=gene-PUW31_10525;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=PUW31_10525 CP118128.1 Protein Homology CDS 2111455 2112267 . + 0 ID=cds-WJH10457.1;Parent=gene-PUW31_10525;Dbxref=NCBI_GP:WJH10457.1;Name=WJH10457.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=pduB;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228567.1;locus_tag=PUW31_10525;product=propanediol utilization microcompartment protein PduB;protein_id=WJH10457.1;transl_table=11 CP118128.1 Genbank gene 2112286 2113944 . + . ID=gene-PUW31_10530;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=PUW31_10530 CP118128.1 Protein Homology CDS 2112286 2113944 . + 0 ID=cds-WJH10458.1;Parent=gene-PUW31_10530;Dbxref=NCBI_GP:WJH10458.1;Name=WJH10458.1;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460985.1;locus_tag=PUW31_10530;product=propanediol dehydratase large subunit PduC;protein_id=WJH10458.1;transl_table=11 CP118128.1 Genbank gene 2113955 2114629 . + . ID=gene-PUW31_10535;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=PUW31_10535 CP118128.1 Protein Homology CDS 2113955 2114629 . + 0 ID=cds-WJH10459.1;Parent=gene-PUW31_10535;Dbxref=NCBI_GP:WJH10459.1;Name=WJH10459.1;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460986.1;locus_tag=PUW31_10535;product=propanediol dehydratase medium subunit PduD;protein_id=WJH10459.1;transl_table=11 CP118128.1 Genbank gene 2114644 2115165 . + . ID=gene-PUW31_10540;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=PUW31_10540 CP118128.1 Protein Homology CDS 2114644 2115165 . + 0 ID=cds-WJH10460.1;Parent=gene-PUW31_10540;Dbxref=NCBI_GP:WJH10460.1;Name=WJH10460.1;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460987.1;locus_tag=PUW31_10540;product=propanediol dehydratase small subunit PduE;protein_id=WJH10460.1;transl_table=11 CP118128.1 Genbank pseudogene 2115175 2117015 . + . ID=gene-PUW31_10545;Name=pduG;gbkey=Gene;gene=pduG;gene_biotype=pseudogene;locus_tag=PUW31_10545;pseudo=true CP118128.1 Protein Homology CDS 2115175 2117015 . + 0 ID=cds-PUW31_10545;Parent=gene-PUW31_10545;Note=frameshifted;gbkey=CDS;gene=pduG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=PUW31_10545;product=propanediol dehydratase reactivase alpha subunit PduG;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2117005 2117355 . + . ID=gene-PUW31_10550;Name=pduH;gbkey=Gene;gene=pduH;gene_biotype=protein_coding;locus_tag=PUW31_10550 CP118128.1 Protein Homology CDS 2117005 2117355 . + 0 ID=cds-WJH10461.1;Parent=gene-PUW31_10550;Dbxref=NCBI_GP:WJH10461.1;Name=WJH10461.1;gbkey=CDS;gene=pduH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460989.1;locus_tag=PUW31_10550;product=propanediol dehydratase reactivase beta subunit PduH;protein_id=WJH10461.1;transl_table=11 CP118128.1 Genbank gene 2117374 2117649 . + . ID=gene-PUW31_10555;Name=pduJ;gbkey=Gene;gene=pduJ;gene_biotype=protein_coding;locus_tag=PUW31_10555 CP118128.1 Protein Homology CDS 2117374 2117649 . + 0 ID=cds-WJH10462.1;Parent=gene-PUW31_10555;Dbxref=NCBI_GP:WJH10462.1;Name=WJH10462.1;gbkey=CDS;gene=pduJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460990.1;locus_tag=PUW31_10555;product=propanediol utilization microcompartment protein PduJ;protein_id=WJH10462.1;transl_table=11 CP118128.1 Genbank gene 2117653 2118135 . + . ID=gene-PUW31_10560;Name=pduK;gbkey=Gene;gene=pduK;gene_biotype=protein_coding;locus_tag=PUW31_10560 CP118128.1 Protein Homology CDS 2117653 2118135 . + 0 ID=cds-WJH10463.1;Parent=gene-PUW31_10560;Dbxref=NCBI_GP:WJH10463.1;Name=WJH10463.1;gbkey=CDS;gene=pduK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460991.3;locus_tag=PUW31_10560;product=propanediol utilization microcompartment protein PduK;protein_id=WJH10463.1;transl_table=11 CP118128.1 Genbank gene 2118135 2118767 . + . ID=gene-PUW31_10565;Name=PUW31_10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10565 CP118128.1 Protein Homology CDS 2118135 2118767 . + 0 ID=cds-WJH10464.1;Parent=gene-PUW31_10565;Dbxref=NCBI_GP:WJH10464.1;Name=WJH10464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460992.1;locus_tag=PUW31_10565;product=phosphate propanoyltransferase;protein_id=WJH10464.1;transl_table=11 CP118128.1 Genbank gene 2118764 2119255 . + . ID=gene-PUW31_10570;Name=pduM;gbkey=Gene;gene=pduM;gene_biotype=protein_coding;locus_tag=PUW31_10570 CP118128.1 Protein Homology CDS 2118764 2119255 . + 0 ID=cds-WJH10465.1;Parent=gene-PUW31_10570;Dbxref=NCBI_GP:WJH10465.1;Name=WJH10465.1;gbkey=CDS;gene=pduM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460993.1;locus_tag=PUW31_10570;product=propanediol utilization microcompartment protein PduM;protein_id=WJH10465.1;transl_table=11 CP118128.1 Genbank gene 2119259 2119534 . + . ID=gene-PUW31_10575;Name=pduN;gbkey=Gene;gene=pduN;gene_biotype=protein_coding;locus_tag=PUW31_10575 CP118128.1 Protein Homology CDS 2119259 2119534 . + 0 ID=cds-WJH10466.1;Parent=gene-PUW31_10575;Dbxref=NCBI_GP:WJH10466.1;Name=WJH10466.1;gbkey=CDS;gene=pduN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228577.1;locus_tag=PUW31_10575;product=propanediol utilization microcompartment protein PduN;protein_id=WJH10466.1;transl_table=11 CP118128.1 Genbank pseudogene 2119544 2120517 . + . ID=gene-PUW31_10580;Name=pduO;gbkey=Gene;gene=pduO;gene_biotype=pseudogene;locus_tag=PUW31_10580;pseudo=true CP118128.1 Protein Homology CDS 2119544 2120517 . + 0 ID=cds-PUW31_10580;Parent=gene-PUW31_10580;Note=frameshifted;gbkey=CDS;gene=pduO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460995.1;locus_tag=PUW31_10580;product=two-domain cob(I)yrinic acid a%2Cc-diamide adenosyltransferase PduO;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2120514 2121908 . + . ID=gene-PUW31_10585;Name=pduP;gbkey=Gene;gene=pduP;gene_biotype=protein_coding;locus_tag=PUW31_10585 CP118128.1 Protein Homology CDS 2120514 2121908 . + 0 ID=cds-WJH10467.1;Parent=gene-PUW31_10585;Dbxref=NCBI_GP:WJH10467.1;Name=WJH10467.1;gbkey=CDS;gene=pduP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460996.1;locus_tag=PUW31_10585;product=CoA-acylating propionaldehyde dehydrogenase PduP;protein_id=WJH10467.1;transl_table=11 CP118128.1 Genbank gene 2121920 2123032 . + . ID=gene-PUW31_10590;Name=pduQ;gbkey=Gene;gene=pduQ;gene_biotype=protein_coding;locus_tag=PUW31_10590 CP118128.1 Protein Homology CDS 2121920 2123032 . + 0 ID=cds-WJH10468.1;Parent=gene-PUW31_10590;Dbxref=NCBI_GP:WJH10468.1;Name=WJH10468.1;gbkey=CDS;gene=pduQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460997.1;locus_tag=PUW31_10590;product=1-propanol dehydrogenase PduQ;protein_id=WJH10468.1;transl_table=11 CP118128.1 Genbank gene 2123029 2124384 . + . ID=gene-PUW31_10595;Name=pduS;gbkey=Gene;gene=pduS;gene_biotype=protein_coding;locus_tag=PUW31_10595 CP118128.1 Protein Homology CDS 2123029 2124384 . + 0 ID=cds-WJH10469.1;Parent=gene-PUW31_10595;Dbxref=NCBI_GP:WJH10469.1;Name=WJH10469.1;gbkey=CDS;gene=pduS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460998.1;locus_tag=PUW31_10595;product=cobalamin reductase PduS;protein_id=WJH10469.1;transl_table=11 CP118128.1 Genbank gene 2124387 2124941 . + . ID=gene-PUW31_10600;Name=pduT;gbkey=Gene;gene=pduT;gene_biotype=protein_coding;locus_tag=PUW31_10600 CP118128.1 Protein Homology CDS 2124387 2124941 . + 0 ID=cds-WJH10470.1;Parent=gene-PUW31_10600;Dbxref=NCBI_GP:WJH10470.1;Name=WJH10470.1;gbkey=CDS;gene=pduT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460999.1;locus_tag=PUW31_10600;product=propanediol utilization microcompartment protein PduT;protein_id=WJH10470.1;transl_table=11 CP118128.1 Genbank gene 2124941 2125291 . + . ID=gene-PUW31_10605;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=PUW31_10605 CP118128.1 Protein Homology CDS 2124941 2125291 . + 0 ID=cds-WJH10471.1;Parent=gene-PUW31_10605;Dbxref=NCBI_GP:WJH10471.1;Name=WJH10471.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461000.1;locus_tag=PUW31_10605;product=propanediol utilization microcompartment protein PduU;protein_id=WJH10471.1;transl_table=11 CP118128.1 Genbank gene 2125296 2125748 . + . ID=gene-PUW31_10610;Name=pduV;gbkey=Gene;gene=pduV;gene_biotype=protein_coding;locus_tag=PUW31_10610 CP118128.1 Protein Homology CDS 2125296 2125748 . + 0 ID=cds-WJH10472.1;Parent=gene-PUW31_10610;Dbxref=NCBI_GP:WJH10472.1;Name=WJH10472.1;gbkey=CDS;gene=pduV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461001.1;locus_tag=PUW31_10610;product=propanediol utilization protein PduV;protein_id=WJH10472.1;transl_table=11 CP118128.1 Genbank gene 2125733 2126947 . + . ID=gene-PUW31_10615;Name=pduW;gbkey=Gene;gene=pduW;gene_biotype=protein_coding;locus_tag=PUW31_10615 CP118128.1 Protein Homology CDS 2125733 2126947 . + 0 ID=cds-WJH10473.1;Parent=gene-PUW31_10615;Dbxref=NCBI_GP:WJH10473.1;Name=WJH10473.1;gbkey=CDS;gene=pduW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461002.1;locus_tag=PUW31_10615;product=propanediol utilization propionate kinase PduW;protein_id=WJH10473.1;transl_table=11 CP118128.1 Genbank gene 2127041 2127907 . + . ID=gene-PUW31_10620;Name=pduX;gbkey=Gene;gene=pduX;gene_biotype=protein_coding;locus_tag=PUW31_10620 CP118128.1 Protein Homology CDS 2127041 2127907 . + 0 ID=cds-WJH10474.1;Parent=gene-PUW31_10620;Dbxref=NCBI_GP:WJH10474.1;Name=WJH10474.1;gbkey=CDS;gene=pduX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632997.1;locus_tag=PUW31_10620;product=L-threonine kinase PduX;protein_id=WJH10474.1;transl_table=11 CP118128.1 Genbank gene 2127941 2128276 . - . ID=gene-PUW31_10625;Name=PUW31_10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10625 CP118128.1 Protein Homology CDS 2127941 2128276 . - 0 ID=cds-WJH10475.1;Parent=gene-PUW31_10625;Dbxref=NCBI_GP:WJH10475.1;Name=WJH10475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461004.1;locus_tag=PUW31_10625;product=DUF496 family protein;protein_id=WJH10475.1;transl_table=11 CP118128.1 Genbank gene 2128520 2129578 . - . ID=gene-PUW31_10630;Name=PUW31_10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10630 CP118128.1 Protein Homology CDS 2128520 2129578 . - 0 ID=cds-WJH10476.1;Parent=gene-PUW31_10630;Dbxref=NCBI_GP:WJH10476.1;Name=WJH10476.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461005.1;locus_tag=PUW31_10630;product=FUSC family protein;protein_id=WJH10476.1;transl_table=11 CP118128.1 Genbank gene 2129697 2130164 . - . ID=gene-PUW31_10635;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=PUW31_10635 CP118128.1 Protein Homology CDS 2129697 2130164 . - 0 ID=cds-WJH10477.1;Parent=gene-PUW31_10635;Dbxref=NCBI_GP:WJH10477.1;Name=WJH10477.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461006.1;locus_tag=PUW31_10635;product=DNA gyrase inhibitor SbmC;protein_id=WJH10477.1;transl_table=11 CP118128.1 Genbank gene 2130315 2131487 . - . ID=gene-PUW31_10640;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=PUW31_10640 CP118128.1 Protein Homology CDS 2130315 2131487 . - 0 ID=cds-WJH10478.1;Parent=gene-PUW31_10640;Dbxref=NCBI_GP:WJH10478.1;Name=WJH10478.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461007.1;locus_tag=PUW31_10640;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WJH10478.1;transl_table=11 CP118128.1 Genbank gene 2131611 2132375 . - . ID=gene-PUW31_10645;Name=PUW31_10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10645 CP118128.1 Protein Homology CDS 2131611 2132375 . - 0 ID=cds-WJH10479.1;Parent=gene-PUW31_10645;Dbxref=NCBI_GP:WJH10479.1;Name=WJH10479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461008.1;locus_tag=PUW31_10645;product=thiosulfate reductase cytochrome B subunit;protein_id=WJH10479.1;transl_table=11 CP118128.1 Genbank gene 2132372 2132950 . - . ID=gene-PUW31_10650;Name=phsB;gbkey=Gene;gene=phsB;gene_biotype=protein_coding;locus_tag=PUW31_10650 CP118128.1 Protein Homology CDS 2132372 2132950 . - 0 ID=cds-WJH10480.1;Parent=gene-PUW31_10650;Dbxref=NCBI_GP:WJH10480.1;Name=WJH10480.1;gbkey=CDS;gene=phsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461009.1;locus_tag=PUW31_10650;product=thiosulfate reductase electron transport protein PhsB;protein_id=WJH10480.1;transl_table=11 CP118128.1 Genbank gene 2132965 2135241 . - . ID=gene-PUW31_10655;Name=phsA;gbkey=Gene;gene=phsA;gene_biotype=protein_coding;locus_tag=PUW31_10655 CP118128.1 Protein Homology CDS 2132965 2135241 . - 0 ID=cds-WJH10481.1;Parent=gene-PUW31_10655;Dbxref=NCBI_GP:WJH10481.1;Name=WJH10481.1;Ontology_term=GO:0016491,GO:0043546,GO:0051539;gbkey=CDS;gene=phsA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461010.1;locus_tag=PUW31_10655;product=thiosulfate reductase PhsA;protein_id=WJH10481.1;transl_table=11 CP118128.1 Genbank pseudogene 2135501 2135611 . - . ID=gene-PUW31_10660;Name=PUW31_10660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_10660;pseudo=true CP118128.1 Protein Homology CDS 2135501 2135611 . - 0 ID=cds-PUW31_10660;Parent=gene-PUW31_10660;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=PUW31_10660;product=heavy metal-binding domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2135861 2138140 . + . ID=gene-PUW31_10665;Name=PUW31_10665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_10665;pseudo=true CP118128.1 Protein Homology CDS 2135861 2138140 . + 0 ID=cds-PUW31_10665;Parent=gene-PUW31_10665;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461011.1;locus_tag=PUW31_10665;product=type III secretion system effector HECT-type E3 ubiquitin transferase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2138273 2138350 . - . ID=gene-PUW31_10670;Name=PUW31_10670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_10670;pseudo=true CP118128.1 Protein Homology CDS 2138273 2138350 . - 0 ID=cds-PUW31_10670;Parent=gene-PUW31_10670;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226536.1;locus_tag=PUW31_10670;product=hypothetical protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2138510 2139940 . + . ID=gene-PUW31_10675;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=PUW31_10675 CP118128.1 Protein Homology CDS 2138510 2139940 . + 0 ID=cds-WJH10482.1;Parent=gene-PUW31_10675;Dbxref=NCBI_GP:WJH10482.1;Name=WJH10482.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008852;gbkey=CDS;gene=sbcB;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,exodeoxyribonuclease I activity|0008852||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461012.1;locus_tag=PUW31_10675;product=exodeoxyribonuclease I;protein_id=WJH10482.1;transl_table=11 CP118128.1 Genbank gene 2140076 2141434 . - . ID=gene-PUW31_10680;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=PUW31_10680 CP118128.1 Protein Homology CDS 2140076 2141434 . - 0 ID=cds-WJH10483.1;Parent=gene-PUW31_10680;Dbxref=NCBI_GP:WJH10483.1;Name=WJH10483.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=PUW31_10680;product=putrescine/proton symporter PlaP;protein_id=WJH10483.1;transl_table=11 CP118128.1 Genbank gene 2141424 2141486 . - . ID=gene-PUW31_10685;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=PUW31_10685 CP118128.1 Protein Homology CDS 2141424 2141486 . - 0 ID=cds-WJH10721.1;Parent=gene-PUW31_10685;Dbxref=NCBI_GP:WJH10721.1;Name=WJH10721.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=PUW31_10685;product=membrane protein YoeI;protein_id=WJH10721.1;transl_table=11 CP118128.1 Genbank gene 2141720 2142634 . - . ID=gene-PUW31_10690;Name=PUW31_10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10690 CP118128.1 Protein Homology CDS 2141720 2142634 . - 0 ID=cds-WJH10484.1;Parent=gene-PUW31_10690;Dbxref=NCBI_GP:WJH10484.1;Name=WJH10484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461014.1;locus_tag=PUW31_10690;product=LysR family transcriptional regulator;protein_id=WJH10484.1;transl_table=11 CP118128.1 Genbank gene 2142680 2143504 . - . ID=gene-PUW31_10695;Name=PUW31_10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10695 CP118128.1 Protein Homology CDS 2142680 2143504 . - 0 ID=cds-WJH10485.1;Parent=gene-PUW31_10695;Dbxref=NCBI_GP:WJH10485.1;Name=WJH10485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461015.1;locus_tag=PUW31_10695;product=SDR family oxidoreductase;protein_id=WJH10485.1;transl_table=11 CP118128.1 Genbank gene 2143667 2143717 . + . ID=gene-PUW31_10700;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=PUW31_10700 CP118128.1 Protein Homology CDS 2143667 2143717 . + 0 ID=cds-WJH10722.1;Parent=gene-PUW31_10700;Dbxref=NCBI_GP:WJH10722.1;Name=WJH10722.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=PUW31_10700;product=his operon leader peptide;protein_id=WJH10722.1;transl_table=11 CP118128.1 cmsearch sequence_feature 2143693 2143816 . + . ID=id-CP118128.1:2143693..2143816;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 CP118128.1 Genbank gene 2143863 2144762 . + . ID=gene-PUW31_10705;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=PUW31_10705 CP118128.1 Protein Homology CDS 2143863 2144762 . + 0 ID=cds-WJH10486.1;Parent=gene-PUW31_10705;Dbxref=NCBI_GP:WJH10486.1;Name=WJH10486.1;Ontology_term=GO:0000105,GO:0003879;gbkey=CDS;gene=hisG;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=PUW31_10705;product=ATP phosphoribosyltransferase;protein_id=WJH10486.1;transl_table=11 CP118128.1 Genbank gene 2144865 2146169 . + . ID=gene-PUW31_10710;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=PUW31_10710 CP118128.1 Protein Homology CDS 2144865 2146169 . + 0 ID=cds-WJH10487.1;Parent=gene-PUW31_10710;Dbxref=NCBI_GP:WJH10487.1;Name=WJH10487.1;Ontology_term=GO:0000105,GO:0004399;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461017.1;locus_tag=PUW31_10710;product=histidinol dehydrogenase;protein_id=WJH10487.1;transl_table=11 CP118128.1 Genbank gene 2146166 2147245 . + . ID=gene-PUW31_10715;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=PUW31_10715 CP118128.1 Protein Homology CDS 2146166 2147245 . + 0 ID=cds-WJH10488.1;Parent=gene-PUW31_10715;Dbxref=NCBI_GP:WJH10488.1;Name=WJH10488.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461018.1;locus_tag=PUW31_10715;product=histidinol-phosphate transaminase;protein_id=WJH10488.1;transl_table=11 CP118128.1 Genbank gene 2147242 2148309 . + . ID=gene-PUW31_10720;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=PUW31_10720 CP118128.1 Protein Homology CDS 2147242 2148309 . + 0 ID=cds-WJH10489.1;Parent=gene-PUW31_10720;Dbxref=NCBI_GP:WJH10489.1;Name=WJH10489.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461019.1;locus_tag=PUW31_10720;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WJH10489.1;transl_table=11 CP118128.1 Genbank gene 2148309 2148899 . + . ID=gene-PUW31_10725;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=PUW31_10725 CP118128.1 Protein Homology CDS 2148309 2148899 . + 0 ID=cds-WJH10490.1;Parent=gene-PUW31_10725;Dbxref=NCBI_GP:WJH10490.1;Name=WJH10490.1;Ontology_term=GO:0000105,GO:0000107,GO:0016884;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=PUW31_10725;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WJH10490.1;transl_table=11 CP118128.1 Genbank gene 2148899 2149636 . + . ID=gene-PUW31_10730;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=PUW31_10730 CP118128.1 Protein Homology CDS 2148899 2149636 . + 0 ID=cds-WJH10491.1;Parent=gene-PUW31_10730;Dbxref=NCBI_GP:WJH10491.1;Name=WJH10491.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461021.1;locus_tag=PUW31_10730;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WJH10491.1;transl_table=11 CP118128.1 Genbank gene 2149618 2150394 . + . ID=gene-PUW31_10735;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=PUW31_10735 CP118128.1 Protein Homology CDS 2149618 2150394 . + 0 ID=cds-WJH10492.1;Parent=gene-PUW31_10735;Dbxref=NCBI_GP:WJH10492.1;Name=WJH10492.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461022.1;locus_tag=PUW31_10735;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WJH10492.1;transl_table=11 CP118128.1 Genbank gene 2150388 2150999 . + . ID=gene-PUW31_10740;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=PUW31_10740 CP118128.1 Protein Homology CDS 2150388 2150999 . + 0 ID=cds-WJH10493.1;Parent=gene-PUW31_10740;Dbxref=NCBI_GP:WJH10493.1;Name=WJH10493.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461023.1;locus_tag=PUW31_10740;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WJH10493.1;transl_table=11 CP118128.1 Genbank gene 2151078 2152061 . - . ID=gene-PUW31_10745;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=PUW31_10745 CP118128.1 Protein Homology CDS 2151078 2152061 . - 0 ID=cds-WJH10494.1;Parent=gene-PUW31_10745;Dbxref=NCBI_GP:WJH10494.1;Name=WJH10494.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461024.1;locus_tag=PUW31_10745;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WJH10494.1;transl_table=11 CP118128.1 Genbank gene 2152204 2153370 . - . ID=gene-PUW31_10750;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=PUW31_10750 CP118128.1 Protein Homology CDS 2152204 2153370 . - 0 ID=cds-WJH10495.1;Parent=gene-PUW31_10750;Dbxref=NCBI_GP:WJH10495.1;Name=WJH10495.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461025.1;locus_tag=PUW31_10750;product=UDP-glucose 6-dehydrogenase;protein_id=WJH10495.1;transl_table=11 CP118128.1 Genbank gene 2153607 2155013 . - . ID=gene-PUW31_10755;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=PUW31_10755 CP118128.1 Protein Homology CDS 2153607 2155013 . - 0 ID=cds-WJH10496.1;Parent=gene-PUW31_10755;Dbxref=NCBI_GP:WJH10496.1;Name=WJH10496.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461026.1;locus_tag=PUW31_10755;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WJH10496.1;transl_table=11 CP118128.1 Genbank gene 2155177 2156607 . - . ID=gene-PUW31_10760;Name=PUW31_10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10760 CP118128.1 Protein Homology CDS 2155177 2156607 . - 0 ID=cds-WJH10497.1;Parent=gene-PUW31_10760;Dbxref=NCBI_GP:WJH10497.1;Name=WJH10497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461027.1;locus_tag=PUW31_10760;product=undecaprenyl-phosphate galactose phosphotransferase;protein_id=WJH10497.1;transl_table=11 CP118128.1 Genbank gene 2156678 2158111 . - . ID=gene-PUW31_10765;Name=rfbK;gbkey=Gene;gene=rfbK;gene_biotype=protein_coding;locus_tag=PUW31_10765 CP118128.1 Protein Homology CDS 2156678 2158111 . - 0 ID=cds-WJH10498.1;Parent=gene-PUW31_10765;Dbxref=NCBI_GP:WJH10498.1;Name=WJH10498.1;gbkey=CDS;gene=rfbK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461028.1;locus_tag=PUW31_10765;product=O-antigen biosynthesis phosphomannomutase RfbK;protein_id=WJH10498.1;transl_table=11 CP118128.1 Genbank gene 2158098 2159537 . - . ID=gene-PUW31_10770;Name=PUW31_10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10770 CP118128.1 Protein Homology CDS 2158098 2159537 . - 0 ID=cds-WJH10499.1;Parent=gene-PUW31_10770;Dbxref=NCBI_GP:WJH10499.1;Name=WJH10499.1;Ontology_term=GO:0009103,GO:0004476;gbkey=CDS;go_function=mannose-6-phosphate isomerase activity|0004476||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461029.1;locus_tag=PUW31_10770;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WJH10499.1;transl_table=11 CP118128.1 Genbank gene 2159538 2160482 . - . ID=gene-PUW31_10775;Name=rfbN;gbkey=Gene;gene=rfbN;gene_biotype=protein_coding;locus_tag=PUW31_10775 CP118128.1 Protein Homology CDS 2159538 2160482 . - 0 ID=cds-WJH10500.1;Parent=gene-PUW31_10775;Dbxref=NCBI_GP:WJH10500.1;Name=WJH10500.1;gbkey=CDS;gene=rfbN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461030.1;locus_tag=PUW31_10775;product=O antigen biosynthesis rhamnosyltransferase RfbN;protein_id=WJH10500.1;transl_table=11 CP118128.1 Genbank pseudogene 2160483 2161543 . - . ID=gene-PUW31_10780;Name=PUW31_10780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_10780;pseudo=true CP118128.1 Protein Homology CDS 2160483 2161543 . - 0 ID=cds-PUW31_10780;Parent=gene-PUW31_10780;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461031.1;locus_tag=PUW31_10780;product=glycosyltransferase family 1 protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2162138 2163118 . - . ID=gene-PUW31_10785;Name=PUW31_10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10785 CP118128.1 Protein Homology CDS 2162138 2163118 . - 0 ID=cds-WJH10501.1;Parent=gene-PUW31_10785;Dbxref=NCBI_GP:WJH10501.1;Name=WJH10501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233008.1;locus_tag=PUW31_10785;product=glycosyltransferase family 2 protein;protein_id=WJH10501.1;transl_table=11 CP118128.1 Genbank gene 2163120 2164418 . - . ID=gene-PUW31_10790;Name=PUW31_10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10790 CP118128.1 Protein Homology CDS 2163120 2164418 . - 0 ID=cds-WJH10502.1;Parent=gene-PUW31_10790;Dbxref=NCBI_GP:WJH10502.1;Name=WJH10502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001228887.1;locus_tag=PUW31_10790;product=MATE family efflux transporter;protein_id=WJH10502.1;transl_table=11 CP118128.1 Genbank gene 2164489 2165505 . - . ID=gene-PUW31_10795;Name=PUW31_10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10795 CP118128.1 Protein Homology CDS 2164489 2165505 . - 0 ID=cds-WJH10503.1;Parent=gene-PUW31_10795;Dbxref=NCBI_GP:WJH10503.1;Name=WJH10503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000770936.1;locus_tag=PUW31_10795;product=CDP-paratose 2-epimerase;protein_id=WJH10503.1;transl_table=11 CP118128.1 Genbank gene 2165502 2166341 . - . ID=gene-PUW31_10800;Name=PUW31_10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10800 CP118128.1 Protein Homology CDS 2165502 2166341 . - 0 ID=cds-WJH10504.1;Parent=gene-PUW31_10800;Dbxref=NCBI_GP:WJH10504.1;Name=WJH10504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000697757.1;locus_tag=PUW31_10800;product=CDP-paratose synthase;protein_id=WJH10504.1;transl_table=11 CP118128.1 Genbank gene 2166378 2167691 . - . ID=gene-PUW31_10805;Name=rfbH;gbkey=Gene;gene=rfbH;gene_biotype=protein_coding;locus_tag=PUW31_10805 CP118128.1 Protein Homology CDS 2166378 2167691 . - 0 ID=cds-WJH10505.1;Parent=gene-PUW31_10805;Dbxref=NCBI_GP:WJH10505.1;Name=WJH10505.1;Ontology_term=GO:0003824;gbkey=CDS;gene=rfbH;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461035.1;locus_tag=PUW31_10805;product=lipopolysaccharide biosynthesis protein RfbH;protein_id=WJH10505.1;transl_table=11 CP118128.1 Genbank gene 2167718 2168797 . - . ID=gene-PUW31_10810;Name=rfbG;gbkey=Gene;gene=rfbG;gene_biotype=protein_coding;locus_tag=PUW31_10810 CP118128.1 Protein Homology CDS 2167718 2168797 . - 0 ID=cds-WJH10506.1;Parent=gene-PUW31_10810;Dbxref=NCBI_GP:WJH10506.1;Name=WJH10506.1;Ontology_term=GO:0009243,GO:0047733;gbkey=CDS;gene=rfbG;go_function=CDP-glucose 4%2C6-dehydratase activity|0047733||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461036.1;locus_tag=PUW31_10810;product=CDP-glucose 4%2C6-dehydratase;protein_id=WJH10506.1;transl_table=11 CP118128.1 Genbank gene 2168802 2169575 . - . ID=gene-PUW31_10815;Name=rfbF;gbkey=Gene;gene=rfbF;gene_biotype=protein_coding;locus_tag=PUW31_10815 CP118128.1 Protein Homology CDS 2168802 2169575 . - 0 ID=cds-WJH10507.1;Parent=gene-PUW31_10815;Dbxref=NCBI_GP:WJH10507.1;Name=WJH10507.1;Ontology_term=GO:0009103,GO:0047343;gbkey=CDS;gene=rfbF;go_function=glucose-1-phosphate cytidylyltransferase activity|0047343||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461037.1;locus_tag=PUW31_10815;product=glucose-1-phosphate cytidylyltransferase;protein_id=WJH10507.1;transl_table=11 CP118128.1 Genbank pseudogene 2169572 2170564 . - . ID=gene-PUW31_10820;Name=PUW31_10820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_10820;pseudo=true CP118128.1 Protein Homology CDS 2169572 2170564 . - 0 ID=cds-PUW31_10820;Parent=gene-PUW31_10820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461038.1;locus_tag=PUW31_10820;product=CDP-6-deoxy-delta-3%2C4-glucoseen reductase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2170570 2171121 . - . ID=gene-PUW31_10825;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=PUW31_10825 CP118128.1 Protein Homology CDS 2170570 2171121 . - 0 ID=cds-WJH10508.1;Parent=gene-PUW31_10825;Dbxref=NCBI_GP:WJH10508.1;Name=WJH10508.1;Ontology_term=GO:0009243,GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461039.1;locus_tag=PUW31_10825;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WJH10508.1;transl_table=11 CP118128.1 Genbank gene 2171122 2172000 . - . ID=gene-PUW31_10830;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=PUW31_10830 CP118128.1 Protein Homology CDS 2171122 2172000 . - 0 ID=cds-WJH10723.1;Parent=gene-PUW31_10830;Dbxref=NCBI_GP:WJH10723.1;Name=WJH10723.1;Ontology_term=GO:0045226,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=extracellular polysaccharide biosynthetic process|0045226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461040.1;locus_tag=PUW31_10830;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WJH10723.1;transl_table=11 CP118128.1 Genbank gene 2172048 2172947 . - . ID=gene-PUW31_10835;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=PUW31_10835 CP118128.1 Protein Homology CDS 2172048 2172947 . - 0 ID=cds-WJH10509.1;Parent=gene-PUW31_10835;Dbxref=NCBI_GP:WJH10509.1;Name=WJH10509.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461041.1;locus_tag=PUW31_10835;product=dTDP-4-dehydrorhamnose reductase;protein_id=WJH10509.1;transl_table=11 CP118128.1 Genbank gene 2172947 2174032 . - . ID=gene-PUW31_10840;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=PUW31_10840 CP118128.1 Protein Homology CDS 2172947 2174032 . - 0 ID=cds-WJH10510.1;Parent=gene-PUW31_10840;Dbxref=NCBI_GP:WJH10510.1;Name=WJH10510.1;Ontology_term=GO:0009243,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461042.1;locus_tag=PUW31_10840;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WJH10510.1;transl_table=11 CP118128.1 Genbank gene 2174409 2175302 . - . ID=gene-PUW31_10845;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=PUW31_10845 CP118128.1 Protein Homology CDS 2174409 2175302 . - 0 ID=cds-WJH10511.1;Parent=gene-PUW31_10845;Dbxref=NCBI_GP:WJH10511.1;Name=WJH10511.1;Ontology_term=GO:0009225,GO:0030234;gbkey=CDS;gene=galF;go_function=enzyme regulator activity|0030234||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461043.1;locus_tag=PUW31_10845;product=GalU regulator GalF;protein_id=WJH10511.1;transl_table=11 CP118128.1 Genbank gene 2175480 2176883 . - . ID=gene-PUW31_10850;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=PUW31_10850 CP118128.1 Protein Homology CDS 2175480 2176883 . - 0 ID=cds-WJH10512.1;Parent=gene-PUW31_10850;Dbxref=NCBI_GP:WJH10512.1;Name=WJH10512.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461044.1;locus_tag=PUW31_10850;product=colanic acid biosynthesis protein WcaM;protein_id=WJH10512.1;transl_table=11 CP118128.1 Genbank gene 2176894 2178114 . - . ID=gene-PUW31_10855;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=PUW31_10855 CP118128.1 Protein Homology CDS 2176894 2178114 . - 0 ID=cds-WJH10513.1;Parent=gene-PUW31_10855;Dbxref=NCBI_GP:WJH10513.1;Name=WJH10513.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461045.1;locus_tag=PUW31_10855;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WJH10513.1;transl_table=11 CP118128.1 Genbank gene 2178111 2179391 . - . ID=gene-PUW31_10860;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=PUW31_10860 CP118128.1 Protein Homology CDS 2178111 2179391 . - 0 ID=cds-WJH10514.1;Parent=gene-PUW31_10860;Dbxref=NCBI_GP:WJH10514.1;Name=WJH10514.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=PUW31_10860;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WJH10514.1;transl_table=11 CP118128.1 Genbank gene 2179413 2180891 . - . ID=gene-PUW31_10865;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=PUW31_10865 CP118128.1 Protein Homology CDS 2179413 2180891 . - 0 ID=cds-WJH10515.1;Parent=gene-PUW31_10865;Dbxref=NCBI_GP:WJH10515.1;Name=WJH10515.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461047.1;locus_tag=PUW31_10865;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=WJH10515.1;transl_table=11 CP118128.1 Genbank gene 2180993 2182387 . - . ID=gene-PUW31_10870;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=PUW31_10870 CP118128.1 Protein Homology CDS 2180993 2182387 . - 0 ID=cds-WJH10516.1;Parent=gene-PUW31_10870;Dbxref=NCBI_GP:WJH10516.1;Name=WJH10516.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461048.1;locus_tag=PUW31_10870;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WJH10516.1;transl_table=11 CP118128.1 Genbank gene 2182441 2183811 . - . ID=gene-PUW31_10875;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=PUW31_10875 CP118128.1 Protein Homology CDS 2182441 2183811 . - 0 ID=cds-WJH10517.1;Parent=gene-PUW31_10875;Dbxref=NCBI_GP:WJH10517.1;Name=WJH10517.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461049.1;locus_tag=PUW31_10875;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=WJH10517.1;transl_table=11 CP118128.1 Genbank gene 2183922 2185364 . - . ID=gene-PUW31_10880;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=PUW31_10880 CP118128.1 Protein Homology CDS 2183922 2185364 . - 0 ID=cds-WJH10518.1;Parent=gene-PUW31_10880;Dbxref=NCBI_GP:WJH10518.1;Name=WJH10518.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461050.3;locus_tag=PUW31_10880;product=mannose-1-phosphate guanyltransferase;protein_id=WJH10518.1;transl_table=11 CP118128.1 Genbank gene 2185361 2186584 . - . ID=gene-PUW31_10885;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=PUW31_10885 CP118128.1 Protein Homology CDS 2185361 2186584 . - 0 ID=cds-WJH10519.1;Parent=gene-PUW31_10885;Dbxref=NCBI_GP:WJH10519.1;Name=WJH10519.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461051.1;locus_tag=PUW31_10885;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=WJH10519.1;transl_table=11 CP118128.1 Genbank gene 2186581 2187054 . - . ID=gene-PUW31_10890;Name=PUW31_10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10890 CP118128.1 Protein Homology CDS 2186581 2187054 . - 0 ID=cds-WJH10520.1;Parent=gene-PUW31_10890;Dbxref=NCBI_GP:WJH10520.1;Name=WJH10520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526160.1;locus_tag=PUW31_10890;product=GDP-mannose mannosyl hydrolase;protein_id=WJH10520.1;transl_table=11 CP118128.1 Genbank gene 2187057 2188022 . - . ID=gene-PUW31_10895;Name=PUW31_10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10895 CP118128.1 Protein Homology CDS 2187057 2188022 . - 0 ID=cds-WJH10521.1;Parent=gene-PUW31_10895;Dbxref=NCBI_GP:WJH10521.1;Name=WJH10521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461053.1;locus_tag=PUW31_10895;product=GDP-L-fucose synthase;protein_id=WJH10521.1;transl_table=11 CP118128.1 Genbank gene 2188025 2189146 . - . ID=gene-PUW31_10900;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=PUW31_10900 CP118128.1 Protein Homology CDS 2188025 2189146 . - 0 ID=cds-WJH10522.1;Parent=gene-PUW31_10900;Dbxref=NCBI_GP:WJH10522.1;Name=WJH10522.1;Ontology_term=GO:0000271,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=PUW31_10900;product=GDP-mannose 4%2C6-dehydratase;protein_id=WJH10522.1;transl_table=11 CP118128.1 Genbank pseudogene 2189170 2189723 . - . ID=gene-PUW31_10905;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=pseudogene;locus_tag=PUW31_10905;pseudo=true CP118128.1 Protein Homology CDS 2189170 2189723 . - 0 ID=cds-PUW31_10905;Parent=gene-PUW31_10905;Note=frameshifted;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461055.1;locus_tag=PUW31_10905;product=colanic acid biosynthesis acetyltransferase WcaF;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2189739 2190485 . - . ID=gene-PUW31_10910;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=PUW31_10910 CP118128.1 Protein Homology CDS 2189739 2190485 . - 0 ID=cds-WJH10523.1;Parent=gene-PUW31_10910;Dbxref=NCBI_GP:WJH10523.1;Name=WJH10523.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461056.1;locus_tag=PUW31_10910;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WJH10523.1;transl_table=11 CP118128.1 Genbank gene 2190498 2191712 . - . ID=gene-PUW31_10915;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=PUW31_10915 CP118128.1 Protein Homology CDS 2190498 2191712 . - 0 ID=cds-WJH10524.1;Parent=gene-PUW31_10915;Dbxref=NCBI_GP:WJH10524.1;Name=WJH10524.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461057.1;locus_tag=PUW31_10915;product=colanic acid polymerase WcaD;protein_id=WJH10524.1;transl_table=11 CP118128.1 Genbank gene 2191687 2192904 . - . ID=gene-PUW31_10920;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=PUW31_10920 CP118128.1 Protein Homology CDS 2191687 2192904 . - 0 ID=cds-WJH10525.1;Parent=gene-PUW31_10920;Dbxref=NCBI_GP:WJH10525.1;Name=WJH10525.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461058.1;locus_tag=PUW31_10920;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WJH10525.1;transl_table=11 CP118128.1 Genbank gene 2192901 2193389 . - . ID=gene-PUW31_10925;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=PUW31_10925 CP118128.1 Protein Homology CDS 2192901 2193389 . - 0 ID=cds-WJH10526.1;Parent=gene-PUW31_10925;Dbxref=NCBI_GP:WJH10526.1;Name=WJH10526.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461059.1;locus_tag=PUW31_10925;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WJH10526.1;transl_table=11 CP118128.1 Genbank gene 2193392 2194234 . - . ID=gene-PUW31_10930;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=PUW31_10930 CP118128.1 Protein Homology CDS 2193392 2194234 . - 0 ID=cds-WJH10527.1;Parent=gene-PUW31_10930;Dbxref=NCBI_GP:WJH10527.1;Name=WJH10527.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=PUW31_10930;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WJH10527.1;transl_table=11 CP118128.1 Genbank gene 2194321 2196480 . - . ID=gene-PUW31_10935;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=PUW31_10935 CP118128.1 Protein Homology CDS 2194321 2196480 . - 0 ID=cds-WJH10528.1;Parent=gene-PUW31_10935;Dbxref=NCBI_GP:WJH10528.1;Name=WJH10528.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461061.1;locus_tag=PUW31_10935;product=tyrosine-protein kinase Wzc;protein_id=WJH10528.1;transl_table=11 CP118128.1 Genbank gene 2196477 2196926 . - . ID=gene-PUW31_10940;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=PUW31_10940 CP118128.1 Protein Homology CDS 2196477 2196926 . - 0 ID=cds-WJH10529.1;Parent=gene-PUW31_10940;Dbxref=NCBI_GP:WJH10529.1;Name=WJH10529.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461062.1;locus_tag=PUW31_10940;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WJH10529.1;transl_table=11 CP118128.1 Genbank gene 2196932 2198071 . - . ID=gene-PUW31_10945;Name=PUW31_10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10945 CP118128.1 Protein Homology CDS 2196932 2198071 . - 0 ID=cds-WJH10530.1;Parent=gene-PUW31_10945;Dbxref=NCBI_GP:WJH10530.1;Name=WJH10530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461063.1;locus_tag=PUW31_10945;product=polysaccharide export protein;protein_id=WJH10530.1;transl_table=11 CP118128.1 Genbank gene 2198746 2200326 . + . ID=gene-PUW31_10950;Name=PUW31_10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10950 CP118128.1 Protein Homology CDS 2198746 2200326 . + 0 ID=cds-WJH10531.1;Parent=gene-PUW31_10950;Dbxref=NCBI_GP:WJH10531.1;Name=WJH10531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461064.1;locus_tag=PUW31_10950;product=TerC family protein;protein_id=WJH10531.1;transl_table=11 CP118128.1 Genbank gene 2200412 2202268 . - . ID=gene-PUW31_10955;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=PUW31_10955 CP118128.1 Protein Homology CDS 2200412 2202268 . - 0 ID=cds-WJH10532.1;Parent=gene-PUW31_10955;Dbxref=NCBI_GP:WJH10532.1;Name=WJH10532.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461065.1;locus_tag=PUW31_10955;product=outer membrane assembly protein AsmA;protein_id=WJH10532.1;transl_table=11 CP118128.1 Genbank gene 2202307 2202888 . - . ID=gene-PUW31_10960;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=PUW31_10960 CP118128.1 Protein Homology CDS 2202307 2202888 . - 0 ID=cds-WJH10533.1;Parent=gene-PUW31_10960;Dbxref=NCBI_GP:WJH10533.1;Name=WJH10533.1;Ontology_term=GO:0009394,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=2'-deoxyribonucleotide metabolic process|0009394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=PUW31_10960;product=dCTP deaminase;protein_id=WJH10533.1;transl_table=11 CP118128.1 Genbank gene 2202979 2203620 . - . ID=gene-PUW31_10965;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=PUW31_10965 CP118128.1 Protein Homology CDS 2202979 2203620 . - 0 ID=cds-WJH10534.1;Parent=gene-PUW31_10965;Dbxref=NCBI_GP:WJH10534.1;Name=WJH10534.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461067.1;locus_tag=PUW31_10965;product=uridine kinase;protein_id=WJH10534.1;transl_table=11 CP118128.1 Genbank gene 2203951 2206941 . + . ID=gene-PUW31_10970;Name=PUW31_10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_10970 CP118128.1 Protein Homology CDS 2203951 2206941 . + 0 ID=cds-WJH10535.1;Parent=gene-PUW31_10970;Dbxref=NCBI_GP:WJH10535.1;Name=WJH10535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461068.1;locus_tag=PUW31_10970;product=MASE1 domain-containing protein;protein_id=WJH10535.1;transl_table=11 CP118128.1 Genbank gene 2206909 2207778 . - . ID=gene-PUW31_10975;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=PUW31_10975 CP118128.1 Protein Homology CDS 2206909 2207778 . - 0 ID=cds-WJH10536.1;Parent=gene-PUW31_10975;Dbxref=NCBI_GP:WJH10536.1;Name=WJH10536.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461069.1;locus_tag=PUW31_10975;product=DNA-3-methyladenine glycosylase 2;protein_id=WJH10536.1;transl_table=11 CP118128.1 Genbank gene 2207912 2209264 . + . ID=gene-PUW31_10980;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=PUW31_10980 CP118128.1 Protein Homology CDS 2207912 2209264 . + 0 ID=cds-WJH10537.1;Parent=gene-PUW31_10980;Dbxref=NCBI_GP:WJH10537.1;Name=WJH10537.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461070.1;locus_tag=PUW31_10980;product=molecular chaperone;protein_id=WJH10537.1;transl_table=11 CP118128.1 Genbank gene 2209363 2209422 . - . ID=gene-PUW31_10985;Name=ibsA;gbkey=Gene;gene=ibsA;gene_biotype=protein_coding;locus_tag=PUW31_10985 CP118128.1 Protein Homology CDS 2209363 2209422 . - 0 ID=cds-WJH10724.1;Parent=gene-PUW31_10985;Dbxref=NCBI_GP:WJH10724.1;Name=WJH10724.1;gbkey=CDS;gene=ibsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=PUW31_10985;product=type I toxin-antitoxin system toxin IbsA;protein_id=WJH10724.1;transl_table=11 CP118128.1 Genbank gene 2209705 2210946 . + . ID=gene-PUW31_10990;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=PUW31_10990 CP118128.1 Protein Homology CDS 2209705 2210946 . + 0 ID=cds-WJH10538.1;Parent=gene-PUW31_10990;Dbxref=NCBI_GP:WJH10538.1;Name=WJH10538.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461071.1;locus_tag=PUW31_10990;product=multidrug efflux RND transporter subunit MdtA;protein_id=WJH10538.1;transl_table=11 CP118128.1 Genbank gene 2210946 2214068 . + . ID=gene-PUW31_10995;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=PUW31_10995 CP118128.1 Protein Homology CDS 2210946 2214068 . + 0 ID=cds-WJH10539.1;Parent=gene-PUW31_10995;Dbxref=NCBI_GP:WJH10539.1;Name=WJH10539.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461072.1;locus_tag=PUW31_10995;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=WJH10539.1;transl_table=11 CP118128.1 Genbank gene 2214069 2217149 . + . ID=gene-PUW31_11000;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=PUW31_11000 CP118128.1 Protein Homology CDS 2214069 2217149 . + 0 ID=cds-WJH10540.1;Parent=gene-PUW31_11000;Dbxref=NCBI_GP:WJH10540.1;Name=WJH10540.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461073.1;locus_tag=PUW31_11000;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WJH10540.1;transl_table=11 CP118128.1 Genbank pseudogene 2217146 2218556 . + . ID=gene-PUW31_11005;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=pseudogene;locus_tag=PUW31_11005;pseudo=true CP118128.1 Protein Homology CDS 2217146 2218556 . + 0 ID=cds-PUW31_11005;Parent=gene-PUW31_11005;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461074.1;locus_tag=PUW31_11005;product=multidrug transporter subunit MdtD;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2218556 2219959 . + . ID=gene-PUW31_11010;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=PUW31_11010 CP118128.1 Protein Homology CDS 2218556 2219959 . + 0 ID=cds-WJH10541.1;Parent=gene-PUW31_11010;Dbxref=NCBI_GP:WJH10541.1;Name=WJH10541.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461075.1;locus_tag=PUW31_11010;product=two-component system sensor histidine kinase BaeS;protein_id=WJH10541.1;transl_table=11 CP118128.1 Genbank gene 2219956 2220678 . + . ID=gene-PUW31_11015;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=PUW31_11015 CP118128.1 Protein Homology CDS 2219956 2220678 . + 0 ID=cds-WJH10542.1;Parent=gene-PUW31_11015;Dbxref=NCBI_GP:WJH10542.1;Name=WJH10542.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461076.1;locus_tag=PUW31_11015;product=two-component system response regulator BaeR;protein_id=WJH10542.1;transl_table=11 CP118128.1 Genbank gene 2220947 2222149 . + . ID=gene-PUW31_11020;Name=PUW31_11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11020 CP118128.1 Protein Homology CDS 2220947 2222149 . + 0 ID=cds-WJH10543.1;Parent=gene-PUW31_11020;Dbxref=NCBI_GP:WJH10543.1;Name=WJH10543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141078.1;locus_tag=PUW31_11020;product=cytoplasmic protein;protein_id=WJH10543.1;transl_table=11 CP118128.1 Genbank pseudogene 2222149 2222864 . + . ID=gene-PUW31_11025;Name=PUW31_11025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_11025;pseudo=true CP118128.1 Protein Homology CDS 2222149 2222864 . + 0 ID=cds-PUW31_11025;Parent=gene-PUW31_11025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461078.1;locus_tag=PUW31_11025;product=DUF1266 domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2222875 2224986 . + . ID=gene-PUW31_11030;Name=PUW31_11030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_11030;pseudo=true CP118128.1 Protein Homology CDS 2222875 2224986 . + 0 ID=cds-PUW31_11030;Parent=gene-PUW31_11030;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461079.1;locus_tag=PUW31_11030;product=DUF4034 domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2225102 2226463 . + . ID=gene-PUW31_11035;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=PUW31_11035 CP118128.1 Protein Homology CDS 2225102 2226463 . + 0 ID=cds-WJH10725.1;Parent=gene-PUW31_11035;Dbxref=NCBI_GP:WJH10725.1;Name=WJH10725.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461080.1;locus_tag=PUW31_11035;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WJH10725.1;transl_table=11 CP118128.1 Genbank pseudogene 2226914 2227086 . + . ID=gene-PUW31_11040;Name=PUW31_11040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_11040;pseudo=true CP118128.1 Protein Homology CDS 2226914 2227086 . + 0 ID=cds-PUW31_11040;Parent=gene-PUW31_11040;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461081.1;locus_tag=PUW31_11040;product=non-LEE encoded effector protein NleB;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2227102 2227515 . - . ID=gene-PUW31_11045;Name=PUW31_11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11045 CP118128.1 Protein Homology CDS 2227102 2227515 . - 0 ID=cds-WJH10544.1;Parent=gene-PUW31_11045;Dbxref=NCBI_GP:WJH10544.1;Name=WJH10544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461082.1;locus_tag=PUW31_11045;product=CesT family type III secretion system chaperone;protein_id=WJH10544.1;transl_table=11 CP118128.1 Genbank gene 2227637 2227972 . - . ID=gene-PUW31_11050;Name=steD;gbkey=Gene;gene=steD;gene_biotype=protein_coding;locus_tag=PUW31_11050 CP118128.1 Protein Homology CDS 2227637 2227972 . - 0 ID=cds-WJH10545.1;Parent=gene-PUW31_11050;Dbxref=NCBI_GP:WJH10545.1;Name=WJH10545.1;gbkey=CDS;gene=steD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461083.1;locus_tag=PUW31_11050;product=type III secretion system effector SteD;protein_id=WJH10545.1;transl_table=11 CP118128.1 Genbank gene 2228534 2229433 . + . ID=gene-PUW31_11055;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=PUW31_11055 CP118128.1 Protein Homology CDS 2228534 2229433 . + 0 ID=cds-WJH10546.1;Parent=gene-PUW31_11055;Dbxref=NCBI_GP:WJH10546.1;Name=WJH10546.1;Ontology_term=GO:0008150,GO:0001727,GO:0005575;gbkey=CDS;gene=yegS;go_component=cellular_component|0005575||IEA;go_function=lipid kinase activity|0001727||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461084.1;locus_tag=PUW31_11055;product=lipid kinase YegS;protein_id=WJH10546.1;transl_table=11 CP118128.1 Genbank gene 2229486 2230538 . - . ID=gene-PUW31_11060;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=PUW31_11060 CP118128.1 Protein Homology CDS 2229486 2230538 . - 0 ID=cds-WJH10547.1;Parent=gene-PUW31_11060;Dbxref=NCBI_GP:WJH10547.1;Name=WJH10547.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=PUW31_11060;product=class I fructose-bisphosphate aldolase;protein_id=WJH10547.1;transl_table=11 CP118128.1 Genbank gene 2230792 2232063 . + . ID=gene-PUW31_11065;Name=PUW31_11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11065 CP118128.1 Protein Homology CDS 2230792 2232063 . + 0 ID=cds-WJH10548.1;Parent=gene-PUW31_11065;Dbxref=NCBI_GP:WJH10548.1;Name=WJH10548.1;Ontology_term=GO:0015858,GO:0005337,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461086.1;locus_tag=PUW31_11065;product=nucleoside permease;protein_id=WJH10548.1;transl_table=11 CP118128.1 Genbank gene 2232060 2233064 . + . ID=gene-PUW31_11070;Name=PUW31_11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11070 CP118128.1 Protein Homology CDS 2232060 2233064 . + 0 ID=cds-WJH10549.1;Parent=gene-PUW31_11070;Dbxref=NCBI_GP:WJH10549.1;Name=WJH10549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461087.1;locus_tag=PUW31_11070;product=ADP-ribosylglycohydrolase family protein;protein_id=WJH10549.1;transl_table=11 CP118128.1 Genbank gene 2233061 2234026 . + . ID=gene-PUW31_11075;Name=PUW31_11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11075 CP118128.1 Protein Homology CDS 2233061 2234026 . + 0 ID=cds-WJH10550.1;Parent=gene-PUW31_11075;Dbxref=NCBI_GP:WJH10550.1;Name=WJH10550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461088.1;locus_tag=PUW31_11075;product=PfkB family carbohydrate kinase;protein_id=WJH10550.1;transl_table=11 CP118128.1 Genbank gene 2234000 2234746 . - . ID=gene-PUW31_11080;Name=PUW31_11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11080 CP118128.1 Protein Homology CDS 2234000 2234746 . - 0 ID=cds-WJH10551.1;Parent=gene-PUW31_11080;Dbxref=NCBI_GP:WJH10551.1;Name=WJH10551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461089.1;locus_tag=PUW31_11080;product=GntR family transcriptional regulator;protein_id=WJH10551.1;transl_table=11 CP118128.1 Genbank gene 2234782 2235582 . - . ID=gene-PUW31_11085;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=PUW31_11085 CP118128.1 Protein Homology CDS 2234782 2235582 . - 0 ID=cds-WJH10552.1;Parent=gene-PUW31_11085;Dbxref=NCBI_GP:WJH10552.1;Name=WJH10552.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461090.1;locus_tag=PUW31_11085;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WJH10552.1;transl_table=11 CP118128.1 Genbank gene 2235569 2236366 . - . ID=gene-PUW31_11090;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=PUW31_11090 CP118128.1 Protein Homology CDS 2235569 2236366 . - 0 ID=cds-WJH10553.1;Parent=gene-PUW31_11090;Dbxref=NCBI_GP:WJH10553.1;Name=WJH10553.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461091.1;locus_tag=PUW31_11090;product=hydroxyethylthiazole kinase;protein_id=WJH10553.1;transl_table=11 CP118128.1 cmsearch riboswitch 2236398 2236494 . - . ID=id-CP118128.1:2236398..2236494;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118128.1 Genbank gene 2236776 2237090 . + . ID=gene-PUW31_11095;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=PUW31_11095 CP118128.1 Protein Homology CDS 2236776 2237090 . + 0 ID=cds-WJH10554.1;Parent=gene-PUW31_11095;Dbxref=NCBI_GP:WJH10554.1;Name=WJH10554.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461092.1;locus_tag=PUW31_11095;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WJH10554.1;transl_table=11 CP118128.1 Genbank gene 2237134 2238156 . - . ID=gene-PUW31_11100;Name=PUW31_11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11100 CP118128.1 Protein Homology CDS 2237134 2238156 . - 0 ID=cds-WJH10555.1;Parent=gene-PUW31_11100;Dbxref=NCBI_GP:WJH10555.1;Name=WJH10555.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000825913.1;locus_tag=PUW31_11100;product=fimbrial protein;protein_id=WJH10555.1;transl_table=11 CP118128.1 Genbank pseudogene 2238172 2240659 . - . ID=gene-PUW31_11105;Name=PUW31_11105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_11105;pseudo=true CP118128.1 Protein Homology CDS 2238172 2240659 . - 0 ID=cds-PUW31_11105;Parent=gene-PUW31_11105;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000413359.1;locus_tag=PUW31_11105;product=fimbrial biogenesis outer membrane usher protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2240688 2241368 . - . ID=gene-PUW31_11110;Name=PUW31_11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11110 CP118128.1 Protein Homology CDS 2240688 2241368 . - 0 ID=cds-WJH10556.1;Parent=gene-PUW31_11110;Dbxref=NCBI_GP:WJH10556.1;Name=WJH10556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000871810.1;locus_tag=PUW31_11110;product=fimbrial assembly chaperone;protein_id=WJH10556.1;transl_table=11 CP118128.1 Genbank gene 2241430 2241963 . - . ID=gene-PUW31_11115;Name=yehD;gbkey=Gene;gene=yehD;gene_biotype=protein_coding;locus_tag=PUW31_11115 CP118128.1 Protein Homology CDS 2241430 2241963 . - 0 ID=cds-WJH10557.1;Parent=gene-PUW31_11115;Dbxref=NCBI_GP:WJH10557.1;Name=WJH10557.1;gbkey=CDS;gene=yehD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830679.1;locus_tag=PUW31_11115;product=fimbrial protein YehD;protein_id=WJH10557.1;transl_table=11 CP118128.1 Genbank gene 2242241 2242522 . - . ID=gene-PUW31_11120;Name=PUW31_11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11120 CP118128.1 Protein Homology CDS 2242241 2242522 . - 0 ID=cds-WJH10558.1;Parent=gene-PUW31_11120;Dbxref=NCBI_GP:WJH10558.1;Name=WJH10558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461097.1;locus_tag=PUW31_11120;product=YehE family protein;protein_id=WJH10558.1;transl_table=11 CP118128.1 Genbank gene 2242799 2243908 . - . ID=gene-PUW31_11125;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=PUW31_11125 CP118128.1 Protein Homology CDS 2242799 2243908 . - 0 ID=cds-WJH10559.1;Parent=gene-PUW31_11125;Dbxref=NCBI_GP:WJH10559.1;Name=WJH10559.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461098.1;locus_tag=PUW31_11125;product=iron-sulfur cluster carrier protein ApbC;protein_id=WJH10559.1;transl_table=11 CP118128.1 Genbank gene 2244073 2246106 . + . ID=gene-PUW31_11130;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=PUW31_11130 CP118128.1 Protein Homology CDS 2244073 2246106 . + 0 ID=cds-WJH10560.1;Parent=gene-PUW31_11130;Dbxref=NCBI_GP:WJH10560.1;Name=WJH10560.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461099.1;locus_tag=PUW31_11130;product=methionine--tRNA ligase;protein_id=WJH10560.1;transl_table=11 CP118128.1 Genbank gene 2246347 2246805 . + . ID=gene-PUW31_11135;Name=PUW31_11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11135 CP118128.1 Protein Homology CDS 2246347 2246805 . + 0 ID=cds-WJH10561.1;Parent=gene-PUW31_11135;Dbxref=NCBI_GP:WJH10561.1;Name=WJH10561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461100.1;locus_tag=PUW31_11135;product=YehR family lipoprotein;protein_id=WJH10561.1;transl_table=11 CP118128.1 Genbank pseudogene 2246977 2247505 . + . ID=gene-PUW31_11140;Name=PUW31_11140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_11140;pseudo=true CP118128.1 Protein Homology CDS 2246977 2247505 . + 0 ID=cds-PUW31_11140;Parent=gene-PUW31_11140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461101.1;locus_tag=PUW31_11140;product=YehR family lipoprotein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2247562 2248029 . - . ID=gene-PUW31_11145;Name=PUW31_11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11145 CP118128.1 Protein Homology CDS 2247562 2248029 . - 0 ID=cds-WJH10562.1;Parent=gene-PUW31_11145;Dbxref=NCBI_GP:WJH10562.1;Name=WJH10562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461102.1;locus_tag=PUW31_11145;product=DUF1456 family protein;protein_id=WJH10562.1;transl_table=11 CP118128.1 Genbank gene 2248076 2248795 . - . ID=gene-PUW31_11150;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=PUW31_11150 CP118128.1 Protein Homology CDS 2248076 2248795 . - 0 ID=cds-WJH10563.1;Parent=gene-PUW31_11150;Dbxref=NCBI_GP:WJH10563.1;Name=WJH10563.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461103.1;locus_tag=PUW31_11150;product=two-component system response regulator BtsR;protein_id=WJH10563.1;transl_table=11 CP118128.1 Genbank gene 2248792 2250477 . - . ID=gene-PUW31_11155;Name=PUW31_11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11155 CP118128.1 Protein Homology CDS 2248792 2250477 . - 0 ID=cds-WJH10564.1;Parent=gene-PUW31_11155;Dbxref=NCBI_GP:WJH10564.1;Name=WJH10564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461104.1;locus_tag=PUW31_11155;product=sensor histidine kinase;protein_id=WJH10564.1;transl_table=11 CP118128.1 Genbank gene 2250700 2251431 . + . ID=gene-PUW31_11160;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=PUW31_11160 CP118128.1 Protein Homology CDS 2250700 2251431 . + 0 ID=cds-WJH10565.1;Parent=gene-PUW31_11160;Dbxref=NCBI_GP:WJH10565.1;Name=WJH10565.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461105.1;locus_tag=PUW31_11160;product=HTH-type transcriptional regulator MlrA;protein_id=WJH10565.1;transl_table=11 CP118128.1 Genbank gene 2251491 2251598 . + . ID=gene-PUW31_11165;Name=PUW31_11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11165 CP118128.1 Protein Homology CDS 2251491 2251598 . + 0 ID=cds-WJH10566.1;Parent=gene-PUW31_11165;Dbxref=NCBI_GP:WJH10566.1;Name=WJH10566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461106.1;locus_tag=PUW31_11165;product=protein YohO;protein_id=WJH10566.1;transl_table=11 CP118128.1 Genbank gene 2251579 2252310 . - . ID=gene-PUW31_11170;Name=PUW31_11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11170 CP118128.1 Protein Homology CDS 2251579 2252310 . - 0 ID=cds-WJH10567.1;Parent=gene-PUW31_11170;Dbxref=NCBI_GP:WJH10567.1;Name=WJH10567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461107.1;locus_tag=PUW31_11170;product=ABC transporter permease;protein_id=WJH10567.1;transl_table=11 CP118128.1 Genbank gene 2252294 2253241 . - . ID=gene-PUW31_11175;Name=PUW31_11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11175 CP118128.1 Protein Homology CDS 2252294 2253241 . - 0 ID=cds-WJH10568.1;Parent=gene-PUW31_11175;Dbxref=NCBI_GP:WJH10568.1;Name=WJH10568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461108.1;locus_tag=PUW31_11175;product=ABC transporter ATP-binding protein;protein_id=WJH10568.1;transl_table=11 CP118128.1 Genbank gene 2253234 2254403 . - . ID=gene-PUW31_11180;Name=PUW31_11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11180 CP118128.1 Protein Homology CDS 2253234 2254403 . - 0 ID=cds-WJH10569.1;Parent=gene-PUW31_11180;Dbxref=NCBI_GP:WJH10569.1;Name=WJH10569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461109.1;locus_tag=PUW31_11180;product=ABC transporter permease;protein_id=WJH10569.1;transl_table=11 CP118128.1 Genbank gene 2254407 2255324 . - . ID=gene-PUW31_11185;Name=PUW31_11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11185 CP118128.1 Protein Homology CDS 2254407 2255324 . - 0 ID=cds-WJH10570.1;Parent=gene-PUW31_11185;Dbxref=NCBI_GP:WJH10570.1;Name=WJH10570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461110.1;locus_tag=PUW31_11185;product=ABC transporter substrate-binding protein;protein_id=WJH10570.1;transl_table=11 CP118128.1 Genbank gene 2255505 2257802 . - . ID=gene-PUW31_11190;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=PUW31_11190 CP118128.1 Protein Homology CDS 2255505 2257802 . - 0 ID=cds-WJH10571.1;Parent=gene-PUW31_11190;Dbxref=NCBI_GP:WJH10571.1;Name=WJH10571.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461111.1;locus_tag=PUW31_11190;product=beta-glucosidase BglX;protein_id=WJH10571.1;transl_table=11 CP118128.1 Genbank gene 2258069 2259799 . + . ID=gene-PUW31_11195;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=PUW31_11195 CP118128.1 Protein Homology CDS 2258069 2259799 . + 0 ID=cds-WJH10572.1;Parent=gene-PUW31_11195;Dbxref=NCBI_GP:WJH10572.1;Name=WJH10572.1;Ontology_term=GO:0006089,GO:0019516,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA,lactate oxidation|0019516||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461112.1;locus_tag=PUW31_11195;product=D-lactate dehydrogenase;protein_id=WJH10572.1;transl_table=11 CP118128.1 Genbank gene 2259858 2260805 . - . ID=gene-PUW31_11200;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=PUW31_11200 CP118128.1 Protein Homology CDS 2259858 2260805 . - 0 ID=cds-WJH10573.1;Parent=gene-PUW31_11200;Dbxref=NCBI_GP:WJH10573.1;Name=WJH10573.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461113.1;locus_tag=PUW31_11200;product=D-alanyl-D-alanine endopeptidase;protein_id=WJH10573.1;transl_table=11 CP118128.1 Genbank gene 2260971 2261558 . - . ID=gene-PUW31_11205;Name=PUW31_11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11205 CP118128.1 Protein Homology CDS 2260971 2261558 . - 0 ID=cds-WJH10574.1;Parent=gene-PUW31_11205;Dbxref=NCBI_GP:WJH10574.1;Name=WJH10574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=PUW31_11205;product=Yip1 family protein;protein_id=WJH10574.1;transl_table=11 CP118128.1 Genbank gene 2261717 2262286 . + . ID=gene-PUW31_11210;Name=PUW31_11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11210 CP118128.1 Protein Homology CDS 2261717 2262286 . + 0 ID=cds-WJH10575.1;Parent=gene-PUW31_11210;Dbxref=NCBI_GP:WJH10575.1;Name=WJH10575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669449.1;locus_tag=PUW31_11210;product=DedA family protein;protein_id=WJH10575.1;transl_table=11 CP118128.1 Genbank pseudogene 2262335 2263097 . - . ID=gene-PUW31_11215;Name=PUW31_11215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_11215;pseudo=true CP118128.1 Protein Homology CDS 2262335 2263097 . - 0 ID=cds-PUW31_11215;Parent=gene-PUW31_11215;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461116.1;locus_tag=PUW31_11215;product=SDR family oxidoreductase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2263163 2264599 . - . ID=gene-PUW31_11220;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=PUW31_11220 CP118128.1 Protein Homology CDS 2263163 2264599 . - 0 ID=cds-WJH10576.1;Parent=gene-PUW31_11220;Dbxref=NCBI_GP:WJH10576.1;Name=WJH10576.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461117.1;locus_tag=PUW31_11220;product=multidrug resistance outer membrane protein MdtQ;protein_id=WJH10576.1;transl_table=11 CP118128.1 Genbank gene 2264917 2265000 . + . ID=gene-PUW31_11225;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=PUW31_11225 CP118128.1 Protein Homology CDS 2264917 2265000 . + 0 ID=cds-WJH10726.1;Parent=gene-PUW31_11225;Dbxref=NCBI_GP:WJH10726.1;Name=WJH10726.1;gbkey=CDS;gene=yohP;inference=COORDINATES: protein motif:HMM:NF011345.0;locus_tag=PUW31_11225;product=small membrane protein YohP;protein_id=WJH10726.1;transl_table=11 CP118128.1 Genbank gene 2265058 2265996 . - . ID=gene-PUW31_11230;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=PUW31_11230 CP118128.1 Protein Homology CDS 2265058 2265996 . - 0 ID=cds-WJH10577.1;Parent=gene-PUW31_11230;Dbxref=NCBI_GP:WJH10577.1;Name=WJH10577.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461119.1;locus_tag=PUW31_11230;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WJH10577.1;transl_table=11 CP118128.1 Genbank gene 2266105 2267298 . - . ID=gene-PUW31_11235;Name=PUW31_11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11235 CP118128.1 Protein Homology CDS 2266105 2267298 . - 0 ID=cds-WJH10578.1;Parent=gene-PUW31_11235;Dbxref=NCBI_GP:WJH10578.1;Name=WJH10578.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461120.1;locus_tag=PUW31_11235;product=3-hydroxybenzoate 6-monooxygenase;protein_id=WJH10578.1;transl_table=11 CP118128.1 Genbank gene 2267313 2267957 . - . ID=gene-PUW31_11240;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=PUW31_11240 CP118128.1 Protein Homology CDS 2267313 2267957 . - 0 ID=cds-WJH10579.1;Parent=gene-PUW31_11240;Dbxref=NCBI_GP:WJH10579.1;Name=WJH10579.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034;gbkey=CDS;gene=maiA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461121.1;locus_tag=PUW31_11240;product=maleylacetoacetate isomerase;protein_id=WJH10579.1;transl_table=11 CP118128.1 Genbank gene 2267966 2268667 . - . ID=gene-PUW31_11245;Name=PUW31_11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11245 CP118128.1 Protein Homology CDS 2267966 2268667 . - 0 ID=cds-WJH10580.1;Parent=gene-PUW31_11245;Dbxref=NCBI_GP:WJH10580.1;Name=WJH10580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461122.1;locus_tag=PUW31_11245;product=fumarylacetoacetate hydrolase family protein;protein_id=WJH10580.1;transl_table=11 CP118128.1 Genbank gene 2268683 2269720 . - . ID=gene-PUW31_11250;Name=gtdA;gbkey=Gene;gene=gtdA;gene_biotype=protein_coding;locus_tag=PUW31_11250 CP118128.1 Protein Homology CDS 2268683 2269720 . - 0 ID=cds-WJH10581.1;Parent=gene-PUW31_11250;Dbxref=NCBI_GP:WJH10581.1;Name=WJH10581.1;Ontology_term=GO:0047922;gbkey=CDS;gene=gtdA;go_function=gentisate 1%2C2-dioxygenase activity|0047922||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461123.1;locus_tag=PUW31_11250;product=gentisate 1%2C2-dioxygenase;protein_id=WJH10581.1;transl_table=11 CP118128.1 Genbank gene 2269732 2271090 . - . ID=gene-PUW31_11255;Name=PUW31_11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11255 CP118128.1 Protein Homology CDS 2269732 2271090 . - 0 ID=cds-WJH10582.1;Parent=gene-PUW31_11255;Dbxref=NCBI_GP:WJH10582.1;Name=WJH10582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461124.1;locus_tag=PUW31_11255;product=aromatic acid/H+ symport family MFS transporter;protein_id=WJH10582.1;transl_table=11 CP118128.1 Genbank gene 2271216 2272073 . + . ID=gene-PUW31_11260;Name=PUW31_11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11260 CP118128.1 Protein Homology CDS 2271216 2272073 . + 0 ID=cds-WJH10583.1;Parent=gene-PUW31_11260;Dbxref=NCBI_GP:WJH10583.1;Name=WJH10583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000024655.1;locus_tag=PUW31_11260;product=LysR family transcriptional regulator;protein_id=WJH10583.1;transl_table=11 CP118128.1 Genbank gene 2272117 2272515 . + . ID=gene-PUW31_11265;Name=PUW31_11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11265 CP118128.1 Protein Homology CDS 2272117 2272515 . + 0 ID=cds-WJH10584.1;Parent=gene-PUW31_11265;Dbxref=NCBI_GP:WJH10584.1;Name=WJH10584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461126.1;locus_tag=PUW31_11265;product=CidA/LrgA family protein;protein_id=WJH10584.1;transl_table=11 CP118128.1 Genbank gene 2272512 2273207 . + . ID=gene-PUW31_11270;Name=PUW31_11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11270 CP118128.1 Protein Homology CDS 2272512 2273207 . + 0 ID=cds-WJH10585.1;Parent=gene-PUW31_11270;Dbxref=NCBI_GP:WJH10585.1;Name=WJH10585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461127.1;locus_tag=PUW31_11270;product=CidB/LrgB family autolysis modulator;protein_id=WJH10585.1;transl_table=11 CP118128.1 Genbank gene 2273361 2274245 . + . ID=gene-PUW31_11275;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=PUW31_11275 CP118128.1 Protein Homology CDS 2273361 2274245 . + 0 ID=cds-WJH10586.1;Parent=gene-PUW31_11275;Dbxref=NCBI_GP:WJH10586.1;Name=WJH10586.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461128.1;locus_tag=PUW31_11275;product=cytidine deaminase;protein_id=WJH10586.1;transl_table=11 CP118128.1 Genbank gene 2274422 2275141 . + . ID=gene-PUW31_11280;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=PUW31_11280 CP118128.1 Protein Homology CDS 2274422 2275141 . + 0 ID=cds-WJH10587.1;Parent=gene-PUW31_11280;Dbxref=NCBI_GP:WJH10587.1;Name=WJH10587.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461129.1;locus_tag=PUW31_11280;product=outer membrane permeability protein SanA;protein_id=WJH10587.1;transl_table=11 CP118128.1 Genbank gene 2275138 2275383 . + . ID=gene-PUW31_11285;Name=PUW31_11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11285 CP118128.1 Protein Homology CDS 2275138 2275383 . + 0 ID=cds-WJH10588.1;Parent=gene-PUW31_11285;Dbxref=NCBI_GP:WJH10588.1;Name=WJH10588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461130.1;locus_tag=PUW31_11285;product=DUF2542 family protein;protein_id=WJH10588.1;transl_table=11 CP118128.1 Genbank gene 2275588 2276829 . + . ID=gene-PUW31_11290;Name=PUW31_11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11290 CP118128.1 Protein Homology CDS 2275588 2276829 . + 0 ID=cds-WJH10589.1;Parent=gene-PUW31_11290;Dbxref=NCBI_GP:WJH10589.1;Name=WJH10589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461131.1;locus_tag=PUW31_11290;product=NAD(P)-dependent oxidoreductase;protein_id=WJH10589.1;transl_table=11 CP118128.1 Genbank gene 2276823 2278058 . + . ID=gene-PUW31_11295;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=PUW31_11295 CP118128.1 Protein Homology CDS 2276823 2278058 . + 0 ID=cds-WJH10590.1;Parent=gene-PUW31_11295;Dbxref=NCBI_GP:WJH10590.1;Name=WJH10590.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=PUW31_11295;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WJH10590.1;transl_table=11 CP118128.1 Genbank gene 2278133 2279143 . - . ID=gene-PUW31_11300;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=PUW31_11300 CP118128.1 Protein Homology CDS 2278133 2279143 . - 0 ID=cds-WJH10591.1;Parent=gene-PUW31_11300;Dbxref=NCBI_GP:WJH10591.1;Name=WJH10591.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=PUW31_11300;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WJH10591.1;transl_table=11 CP118128.1 Genbank pseudogene 2279159 2280677 . - . ID=gene-PUW31_11305;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=pseudogene;locus_tag=PUW31_11305;pseudo=true CP118128.1 Protein Homology CDS 2279159 2280677 . - 0 ID=cds-PUW31_11305;Parent=gene-PUW31_11305;Note=frameshifted;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=PUW31_11305;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2280811 2281809 . - . ID=gene-PUW31_11310;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=PUW31_11310 CP118128.1 Protein Homology CDS 2280811 2281809 . - 0 ID=cds-WJH10592.1;Parent=gene-PUW31_11310;Dbxref=NCBI_GP:WJH10592.1;Name=WJH10592.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461135.1;locus_tag=PUW31_11310;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WJH10592.1;transl_table=11 CP118128.1 Genbank gene 2282308 2283330 . - . ID=gene-PUW31_11315;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=PUW31_11315 CP118128.1 Protein Homology CDS 2282308 2283330 . - 0 ID=cds-WJH10593.1;Parent=gene-PUW31_11315;Dbxref=NCBI_GP:WJH10593.1;Name=WJH10593.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461136.1;locus_tag=PUW31_11315;product=HTH-type transcriptional regulator GalS;protein_id=WJH10593.1;transl_table=11 CP118128.1 Genbank gene 2283480 2284622 . - . ID=gene-PUW31_11320;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=PUW31_11320 CP118128.1 Protein Homology CDS 2283480 2284622 . - 0 ID=cds-WJH10594.1;Parent=gene-PUW31_11320;Dbxref=NCBI_GP:WJH10594.1;Name=WJH10594.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461137.1;locus_tag=PUW31_11320;product=DUF418 domain-containing protein YeiB;protein_id=WJH10594.1;transl_table=11 CP118128.1 Genbank gene 2284637 2285305 . - . ID=gene-PUW31_11325;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=PUW31_11325 CP118128.1 Protein Homology CDS 2284637 2285305 . - 0 ID=cds-WJH10595.1;Parent=gene-PUW31_11325;Dbxref=NCBI_GP:WJH10595.1;Name=WJH10595.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461138.1;locus_tag=PUW31_11325;product=GTP cyclohydrolase I FolE;protein_id=WJH10595.1;transl_table=11 CP118128.1 Genbank gene 2285635 2286492 . + . ID=gene-PUW31_11330;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=PUW31_11330 CP118128.1 Protein Homology CDS 2285635 2286492 . + 0 ID=cds-WJH10596.1;Parent=gene-PUW31_11330;Dbxref=NCBI_GP:WJH10596.1;Name=WJH10596.1;Ontology_term=GO:0046292,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461139.2;locus_tag=PUW31_11330;product=S-formylglutathione hydrolase;protein_id=WJH10596.1;transl_table=11 CP118128.1 Genbank gene 2286481 2286870 . - . ID=gene-PUW31_11335;Name=PUW31_11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11335 CP118128.1 Protein Homology CDS 2286481 2286870 . - 0 ID=cds-WJH10597.1;Parent=gene-PUW31_11335;Dbxref=NCBI_GP:WJH10597.1;Name=WJH10597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461140.1;locus_tag=PUW31_11335;product=helix-turn-helix transcriptional regulator;protein_id=WJH10597.1;transl_table=11 CP118128.1 Genbank gene 2286875 2288242 . - . ID=gene-PUW31_11340;Name=PUW31_11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11340 CP118128.1 Protein Homology CDS 2286875 2288242 . - 0 ID=cds-WJH10598.1;Parent=gene-PUW31_11340;Dbxref=NCBI_GP:WJH10598.1;Name=WJH10598.1;Ontology_term=GO:0009063,GO:0003941,GO:0051539;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461141.1;locus_tag=PUW31_11340;product=L-serine ammonia-lyase;protein_id=WJH10598.1;transl_table=11 CP118128.1 Genbank gene 2288459 2289346 . + . ID=gene-PUW31_11345;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=PUW31_11345 CP118128.1 Protein Homology CDS 2288459 2289346 . + 0 ID=cds-WJH10599.1;Parent=gene-PUW31_11345;Dbxref=NCBI_GP:WJH10599.1;Name=WJH10599.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461142.1;locus_tag=PUW31_11345;product=phosphoserine phosphatase SerB;protein_id=WJH10599.1;transl_table=11 CP118128.1 Genbank pseudogene 2289379 2290699 . + . ID=gene-PUW31_11350;Name=PUW31_11350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_11350;pseudo=true CP118128.1 Protein Homology CDS 2289379 2290699 . + 0 ID=cds-PUW31_11350;Parent=gene-PUW31_11350;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461143.1;locus_tag=PUW31_11350;product=MFS transporter;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2290743 2292733 . - . ID=gene-PUW31_11355;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=pseudogene;locus_tag=PUW31_11355;pseudo=true CP118128.1 Protein Homology CDS 2290743 2292733 . - 0 ID=cds-PUW31_11355;Parent=gene-PUW31_11355;Note=frameshifted;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461144.1;locus_tag=PUW31_11355;product=catecholate siderophore receptor CirA;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2293079 2294548 . - . ID=gene-PUW31_11360;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=PUW31_11360 CP118128.1 Protein Homology CDS 2293079 2294548 . - 0 ID=cds-WJH10600.1;Parent=gene-PUW31_11360;Dbxref=NCBI_GP:WJH10600.1;Name=WJH10600.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461145.1;locus_tag=PUW31_11360;product=lysine-specific permease;protein_id=WJH10600.1;transl_table=11 CP118128.1 Genbank gene 2294738 2295601 . - . ID=gene-PUW31_11365;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=PUW31_11365 CP118128.1 Protein Homology CDS 2294738 2295601 . - 0 ID=cds-WJH10601.1;Parent=gene-PUW31_11365;Dbxref=NCBI_GP:WJH10601.1;Name=WJH10601.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461146.1;locus_tag=PUW31_11365;product=DNA-binding transcriptional regulator YeiE;protein_id=WJH10601.1;transl_table=11 CP118128.1 Genbank gene 2295722 2296771 . + . ID=gene-PUW31_11370;Name=PUW31_11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11370 CP118128.1 Protein Homology CDS 2295722 2296771 . + 0 ID=cds-WJH10602.1;Parent=gene-PUW31_11370;Dbxref=NCBI_GP:WJH10602.1;Name=WJH10602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461147.1;locus_tag=PUW31_11370;product=YeiH family protein;protein_id=WJH10602.1;transl_table=11 CP118128.1 Genbank gene 2296850 2297707 . + . ID=gene-PUW31_11375;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=PUW31_11375 CP118128.1 Protein Homology CDS 2296850 2297707 . + 0 ID=cds-WJH10603.1;Parent=gene-PUW31_11375;Dbxref=NCBI_GP:WJH10603.1;Name=WJH10603.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461148.1;locus_tag=PUW31_11375;product=deoxyribonuclease IV;protein_id=WJH10603.1;transl_table=11 CP118128.1 Genbank gene 2297772 2299460 . - . ID=gene-PUW31_11380;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=PUW31_11380 CP118128.1 Protein Homology CDS 2297772 2299460 . - 0 ID=cds-WJH10604.1;Parent=gene-PUW31_11380;Dbxref=NCBI_GP:WJH10604.1;Name=WJH10604.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461149.1;locus_tag=PUW31_11380;product=PTS fructose transporter subunit IIBC;protein_id=WJH10604.1;transl_table=11 CP118128.1 Genbank gene 2299477 2300415 . - . ID=gene-PUW31_11385;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=PUW31_11385 CP118128.1 Protein Homology CDS 2299477 2300415 . - 0 ID=cds-WJH10605.1;Parent=gene-PUW31_11385;Dbxref=NCBI_GP:WJH10605.1;Name=WJH10605.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461150.1;locus_tag=PUW31_11385;product=1-phosphofructokinase;protein_id=WJH10605.1;transl_table=11 CP118128.1 Genbank pseudogene 2300415 2301544 . - . ID=gene-PUW31_11390;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=pseudogene;locus_tag=PUW31_11390;pseudo=true CP118128.1 Protein Homology CDS 2300415 2301544 . - 0 ID=cds-PUW31_11390;Parent=gene-PUW31_11390;Note=frameshifted;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461151.1;locus_tag=PUW31_11390;product=fused PTS fructose transporter subunit IIA/HPr protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2301913 2303094 . + . ID=gene-PUW31_11395;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=PUW31_11395 CP118128.1 Protein Homology CDS 2301913 2303094 . + 0 ID=cds-WJH10606.1;Parent=gene-PUW31_11395;Dbxref=NCBI_GP:WJH10606.1;Name=WJH10606.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461152.1;locus_tag=PUW31_11395;product=sugar efflux transporter SetB;protein_id=WJH10606.1;transl_table=11 CP118128.1 Genbank gene 2303158 2303823 . - . ID=gene-PUW31_11400;Name=PUW31_11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11400 CP118128.1 Protein Homology CDS 2303158 2303823 . - 0 ID=cds-WJH10607.1;Parent=gene-PUW31_11400;Dbxref=NCBI_GP:WJH10607.1;Name=WJH10607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461153.1;locus_tag=PUW31_11400;product=GNVR domain-containing protein;protein_id=WJH10607.1;transl_table=11 CP118128.1 Genbank gene 2303825 2303947 . - . ID=gene-PUW31_11405;Name=PUW31_11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11405 CP118128.1 Protein Homology CDS 2303825 2303947 . - 0 ID=cds-WJH10608.1;Parent=gene-PUW31_11405;Dbxref=NCBI_GP:WJH10608.1;Name=WJH10608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461154.1;locus_tag=PUW31_11405;product=hypothetical protein;protein_id=WJH10608.1;transl_table=11 CP118128.1 Genbank pseudogene 2304335 2304590 . - . ID=gene-PUW31_11410;Name=PUW31_11410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_11410;pseudo=true CP118128.1 Protein Homology CDS 2304335 2304590 . - 0 ID=cds-PUW31_11410;Parent=gene-PUW31_11410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675765.1;locus_tag=PUW31_11410;product=YkgJ family cysteine cluster protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2304915 2305487 . + . ID=gene-PUW31_11415;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=PUW31_11415 CP118128.1 Protein Homology CDS 2304915 2305487 . + 0 ID=cds-WJH10609.1;Parent=gene-PUW31_11415;Dbxref=NCBI_GP:WJH10609.1;Name=WJH10609.1;Ontology_term=GO:0006414,GO:0043043,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA,peptide biosynthetic process|0043043||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=PUW31_11415;product=elongation factor P-like protein YeiP;protein_id=WJH10609.1;transl_table=11 CP118128.1 Genbank gene 2305700 2306686 . + . ID=gene-PUW31_11420;Name=PUW31_11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11420 CP118128.1 Protein Homology CDS 2305700 2306686 . + 0 ID=cds-WJH10610.1;Parent=gene-PUW31_11420;Dbxref=NCBI_GP:WJH10610.1;Name=WJH10610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461156.1;locus_tag=PUW31_11420;product=GTP-binding protein;protein_id=WJH10610.1;transl_table=11 CP118128.1 Genbank gene 2306716 2307435 . + . ID=gene-PUW31_11425;Name=PUW31_11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11425 CP118128.1 Protein Homology CDS 2306716 2307435 . + 0 ID=cds-WJH10611.1;Parent=gene-PUW31_11425;Dbxref=NCBI_GP:WJH10611.1;Name=WJH10611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461157.1;locus_tag=PUW31_11425;product=phosphatase PAP2 family protein;protein_id=WJH10611.1;transl_table=11 CP118128.1 Genbank gene 2307849 2308421 . + . ID=gene-PUW31_11430;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=PUW31_11430 CP118128.1 Protein Homology CDS 2307849 2308421 . + 0 ID=cds-WJH10612.1;Parent=gene-PUW31_11430;Dbxref=NCBI_GP:WJH10612.1;Name=WJH10612.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461158.1;locus_tag=PUW31_11430;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WJH10612.1;transl_table=11 CP118128.1 Genbank pseudogene 2308747 2310303 . + . ID=gene-PUW31_11435;Name=PUW31_11435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_11435;pseudo=true CP118128.1 Protein Homology CDS 2308747 2310303 . + 0 ID=cds-PUW31_11435;Parent=gene-PUW31_11435;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461159.1;locus_tag=PUW31_11435;product=cyclic di-GMP phosphodiesterase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2310410 2312215 . + . ID=gene-PUW31_11440;Name=PUW31_11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11440 CP118128.1 Protein Homology CDS 2310410 2312215 . + 0 ID=cds-WJH10613.1;Parent=gene-PUW31_11440;Dbxref=NCBI_GP:WJH10613.1;Name=WJH10613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461160.1;locus_tag=PUW31_11440;product=extracellular solute-binding protein;protein_id=WJH10613.1;transl_table=11 CP118128.1 Genbank gene 2312225 2313319 . + . ID=gene-PUW31_11445;Name=PUW31_11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11445 CP118128.1 Protein Homology CDS 2312225 2313319 . + 0 ID=cds-WJH10614.1;Parent=gene-PUW31_11445;Dbxref=NCBI_GP:WJH10614.1;Name=WJH10614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461161.1;locus_tag=PUW31_11445;product=microcin C ABC transporter permease YejB;protein_id=WJH10614.1;transl_table=11 CP118128.1 Genbank gene 2313319 2314344 . + . ID=gene-PUW31_11450;Name=PUW31_11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11450 CP118128.1 Protein Homology CDS 2313319 2314344 . + 0 ID=cds-WJH10615.1;Parent=gene-PUW31_11450;Dbxref=NCBI_GP:WJH10615.1;Name=WJH10615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461162.1;locus_tag=PUW31_11450;product=ABC transporter permease;protein_id=WJH10615.1;transl_table=11 CP118128.1 Genbank gene 2314346 2315935 . + . ID=gene-PUW31_11455;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=PUW31_11455 CP118128.1 Protein Homology CDS 2314346 2315935 . + 0 ID=cds-WJH10616.1;Parent=gene-PUW31_11455;Dbxref=NCBI_GP:WJH10616.1;Name=WJH10616.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461163.1;locus_tag=PUW31_11455;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WJH10616.1;transl_table=11 CP118128.1 Genbank gene 2315939 2316283 . - . ID=gene-PUW31_11460;Name=PUW31_11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11460 CP118128.1 Protein Homology CDS 2315939 2316283 . - 0 ID=cds-WJH10617.1;Parent=gene-PUW31_11460;Dbxref=NCBI_GP:WJH10617.1;Name=WJH10617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461164.1;locus_tag=PUW31_11460;product=YejG family protein;protein_id=WJH10617.1;transl_table=11 CP118128.1 Genbank gene 2316674 2317864 . - . ID=gene-PUW31_11465;Name=PUW31_11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11465 CP118128.1 Protein Homology CDS 2316674 2317864 . - 0 ID=cds-WJH10618.1;Parent=gene-PUW31_11465;Dbxref=NCBI_GP:WJH10618.1;Name=WJH10618.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461165.1;locus_tag=PUW31_11465;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WJH10618.1;transl_table=11 CP118128.1 Genbank gene 2317892 2318587 . - . ID=gene-PUW31_11470;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=PUW31_11470 CP118128.1 Protein Homology CDS 2317892 2318587 . - 0 ID=cds-WJH10619.1;Parent=gene-PUW31_11470;Dbxref=NCBI_GP:WJH10619.1;Name=WJH10619.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461166.1;locus_tag=PUW31_11470;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WJH10619.1;transl_table=11 CP118128.1 Genbank gene 2318739 2320499 . + . ID=gene-PUW31_11475;Name=PUW31_11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11475 CP118128.1 Protein Homology CDS 2318739 2320499 . + 0 ID=cds-WJH10620.1;Parent=gene-PUW31_11475;Dbxref=NCBI_GP:WJH10620.1;Name=WJH10620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461167.1;locus_tag=PUW31_11475;product=DEAD/DEAH box helicase;protein_id=WJH10620.1;transl_table=11 CP118128.1 Genbank gene 2320624 2320908 . + . ID=gene-PUW31_11480;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=PUW31_11480 CP118128.1 Protein Homology CDS 2320624 2320908 . + 0 ID=cds-WJH10621.1;Parent=gene-PUW31_11480;Dbxref=NCBI_GP:WJH10621.1;Name=WJH10621.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=PUW31_11480;product=50S ribosomal protein L25;protein_id=WJH10621.1;transl_table=11 CP118128.1 Genbank gene 2321016 2321636 . - . ID=gene-PUW31_11485;Name=PUW31_11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11485 CP118128.1 Protein Homology CDS 2321016 2321636 . - 0 ID=cds-WJH10622.1;Parent=gene-PUW31_11485;Dbxref=NCBI_GP:WJH10622.1;Name=WJH10622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461169.1;locus_tag=PUW31_11485;product=hypothetical protein;protein_id=WJH10622.1;transl_table=11 CP118128.1 Genbank gene 2321664 2322671 . - . ID=gene-PUW31_11490;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=PUW31_11490 CP118128.1 Protein Homology CDS 2321664 2322671 . - 0 ID=cds-WJH10623.1;Parent=gene-PUW31_11490;Dbxref=NCBI_GP:WJH10623.1;Name=WJH10623.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461170.1;locus_tag=PUW31_11490;product=nucleoid-associated protein YejK;protein_id=WJH10623.1;transl_table=11 CP118128.1 Genbank gene 2322851 2323078 . + . ID=gene-PUW31_11495;Name=PUW31_11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11495 CP118128.1 Protein Homology CDS 2322851 2323078 . + 0 ID=cds-WJH10624.1;Parent=gene-PUW31_11495;Dbxref=NCBI_GP:WJH10624.1;Name=WJH10624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461171.1;locus_tag=PUW31_11495;product=YejL family protein;protein_id=WJH10624.1;transl_table=11 CP118128.1 Genbank gene 2323110 2324870 . + . ID=gene-PUW31_11500;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=PUW31_11500 CP118128.1 Protein Homology CDS 2323110 2324870 . + 0 ID=cds-WJH10625.1;Parent=gene-PUW31_11500;Dbxref=NCBI_GP:WJH10625.1;Name=WJH10625.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=PUW31_11500;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WJH10625.1;transl_table=11 CP118128.1 Genbank gene 2324944 2325020 . + . ID=gene-PUW31_11505;Name=PUW31_11505;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_11505 CP118128.1 tRNAscan-SE tRNA 2324944 2325020 . + . ID=rna-PUW31_11505;Parent=gene-PUW31_11505;anticodon=(pos:2324978..2324980);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_11505;product=tRNA-Pro CP118128.1 tRNAscan-SE exon 2324944 2325020 . + . ID=exon-PUW31_11505-1;Parent=rna-PUW31_11505;anticodon=(pos:2324978..2324980);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_11505;product=tRNA-Pro CP118128.1 Genbank pseudogene 2324976 2325074 . + . ID=gene-PUW31_11510;Name=PUW31_11510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_11510;pseudo=true CP118128.1 Protein Homology CDS 2324976 2325074 . + 0 ID=cds-PUW31_11510;Parent=gene-PUW31_11510;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460028.1;locus_tag=PUW31_11510;product=hypothetical protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2325331 2325628 . - . ID=gene-PUW31_11515;Name=PUW31_11515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_11515;pseudo=true CP118128.1 Protein Homology CDS 2325331 2325628 . - 0 ID=cds-PUW31_11515;Parent=gene-PUW31_11515;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457662.1;locus_tag=PUW31_11515;product=DUF4113 domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2325641 2326453 . - . ID=gene-PUW31_11520;Name=PUW31_11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11520 CP118128.1 Protein Homology CDS 2325641 2326453 . - 0 ID=cds-WJH10626.1;Parent=gene-PUW31_11520;Dbxref=NCBI_GP:WJH10626.1;Name=WJH10626.1;Ontology_term=GO:0016567,GO:0004842;gbkey=CDS;go_function=ubiquitin-protein transferase activity|0004842||IEA;go_process=protein ubiquitination|0016567||IEA;inference=COORDINATES: protein motif:HMM:NF025849.2;locus_tag=PUW31_11520;product=NEL-type E3 ubiquitin ligase domain-containing protein;protein_id=WJH10626.1;transl_table=11 CP118128.1 Genbank gene 2326434 2327426 . - . ID=gene-PUW31_11525;Name=PUW31_11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11525 CP118128.1 GeneMarkS-2+ CDS 2326434 2327426 . - 0 ID=cds-WJH10627.1;Parent=gene-PUW31_11525;Dbxref=NCBI_GP:WJH10627.1;Name=WJH10627.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_11525;product=hypothetical protein;protein_id=WJH10627.1;transl_table=11 CP118128.1 Genbank pseudogene 2327643 2328008 . - . ID=gene-PUW31_11530;Name=PUW31_11530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_11530;pseudo=true CP118128.1 Protein Homology CDS 2327643 2328008 . - 0 ID=cds-PUW31_11530;Parent=gene-PUW31_11530;Note=secreted by salmonella pathogenicity island 2%3B involved in survival of Salmonella in host cells%3B interferes with host cell ubiquination pathway%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460026.1;locus_tag=PUW31_11530;product=E3 ubiquitin--protein ligase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2328177 2328380 . - . ID=gene-PUW31_11535;Name=PUW31_11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11535 CP118128.1 Protein Homology CDS 2328177 2328380 . - 0 ID=cds-WJH10628.1;Parent=gene-PUW31_11535;Dbxref=NCBI_GP:WJH10628.1;Name=WJH10628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461185.1;locus_tag=PUW31_11535;product=phage tail protein;protein_id=WJH10628.1;transl_table=11 CP118128.1 Genbank pseudogene 2328676 2329467 . - . ID=gene-PUW31_11540;Name=PUW31_11540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_11540;pseudo=true CP118128.1 Protein Homology CDS 2328676 2329467 . - 0 ID=cds-PUW31_11540;Parent=gene-PUW31_11540;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461186.1;locus_tag=PUW31_11540;product=tail fiber protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2329583 2329741 . + . ID=gene-PUW31_11545;Name=PUW31_11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11545 CP118128.1 GeneMarkS-2+ CDS 2329583 2329741 . + 0 ID=cds-WJH07001.1;Parent=gene-PUW31_11545;Dbxref=NCBI_GP:WJH07001.1;Name=WJH07001.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_11545;product=hypothetical protein;protein_id=WJH07001.1;transl_table=11 CP118128.1 Genbank gene 2329770 2329973 . + . ID=gene-PUW31_11550;Name=PUW31_11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11550 CP118128.1 Protein Homology CDS 2329770 2329973 . + 0 ID=cds-WJH10727.1;Parent=gene-PUW31_11550;Dbxref=NCBI_GP:WJH10727.1;Name=WJH10727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461187.1;locus_tag=PUW31_11550;product=DinI-like family protein;protein_id=WJH10727.1;transl_table=11 CP118128.1 Genbank gene 2330165 2330728 . - . ID=gene-PUW31_11555;Name=pagL;gbkey=Gene;gene=pagL;gene_biotype=protein_coding;locus_tag=PUW31_11555 CP118128.1 Protein Homology CDS 2330165 2330728 . - 0 ID=cds-WJH07002.1;Parent=gene-PUW31_11555;Dbxref=NCBI_GP:WJH07002.1;Name=WJH07002.1;gbkey=CDS;gene=pagL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461188.1;locus_tag=PUW31_11555;product=lipid A 3-O-deacylase PagL;protein_id=WJH07002.1;transl_table=11 CP118128.1 Genbank gene 2331458 2332105 . + . ID=gene-PUW31_11560;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=PUW31_11560 CP118128.1 Protein Homology CDS 2331458 2332105 . + 0 ID=cds-WJH10728.1;Parent=gene-PUW31_11560;Dbxref=NCBI_GP:WJH10728.1;Name=WJH10728.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461189.1;locus_tag=PUW31_11560;product=nitrate/nitrite response regulator protein NarP;protein_id=WJH10728.1;transl_table=11 CP118128.1 Genbank gene 2332149 2333201 . - . ID=gene-PUW31_11565;Name=PUW31_11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11565 CP118128.1 Protein Homology CDS 2332149 2333201 . - 0 ID=cds-WJH07003.1;Parent=gene-PUW31_11565;Dbxref=NCBI_GP:WJH07003.1;Name=WJH07003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=PUW31_11565;product=cytochrome c-type biogenesis protein CcmH;protein_id=WJH07003.1;transl_table=11 CP118128.1 Genbank gene 2333198 2333755 . - . ID=gene-PUW31_11570;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=PUW31_11570 CP118128.1 Protein Homology CDS 2333198 2333755 . - 0 ID=cds-WJH07004.1;Parent=gene-PUW31_11570;Dbxref=NCBI_GP:WJH07004.1;Name=WJH07004.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=PUW31_11570;product=thiol:disulfide interchange protein DsbE;protein_id=WJH07004.1;transl_table=11 CP118128.1 Genbank gene 2333752 2335683 . - . ID=gene-PUW31_11575;Name=PUW31_11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11575 CP118128.1 Protein Homology CDS 2333752 2335683 . - 0 ID=cds-WJH07005.1;Parent=gene-PUW31_11575;Dbxref=NCBI_GP:WJH07005.1;Name=WJH07005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=PUW31_11575;product=heme lyase CcmF/NrfE family subunit;protein_id=WJH07005.1;transl_table=11 CP118128.1 Genbank gene 2335680 2336159 . - . ID=gene-PUW31_11580;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=PUW31_11580 CP118128.1 Protein Homology CDS 2335680 2336159 . - 0 ID=cds-WJH07006.1;Parent=gene-PUW31_11580;Dbxref=NCBI_GP:WJH07006.1;Name=WJH07006.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461193.1;locus_tag=PUW31_11580;product=cytochrome c maturation protein CcmE;protein_id=WJH07006.1;transl_table=11 CP118128.1 Genbank gene 2336156 2336368 . - . ID=gene-PUW31_11585;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=PUW31_11585 CP118128.1 Protein Homology CDS 2336156 2336368 . - 0 ID=cds-WJH07007.1;Parent=gene-PUW31_11585;Dbxref=NCBI_GP:WJH07007.1;Name=WJH07007.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461194.1;locus_tag=PUW31_11585;product=heme exporter protein CcmD;protein_id=WJH07007.1;transl_table=11 CP118128.1 Genbank gene 2336365 2337102 . - . ID=gene-PUW31_11590;Name=PUW31_11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11590 CP118128.1 Protein Homology CDS 2336365 2337102 . - 0 ID=cds-WJH07008.1;Parent=gene-PUW31_11590;Dbxref=NCBI_GP:WJH07008.1;Name=WJH07008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=PUW31_11590;product=heme ABC transporter permease;protein_id=WJH07008.1;transl_table=11 CP118128.1 Genbank gene 2337154 2337813 . - . ID=gene-PUW31_11595;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=PUW31_11595 CP118128.1 Protein Homology CDS 2337154 2337813 . - 0 ID=cds-WJH07009.1;Parent=gene-PUW31_11595;Dbxref=NCBI_GP:WJH07009.1;Name=WJH07009.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=PUW31_11595;product=heme exporter protein CcmB;protein_id=WJH07009.1;transl_table=11 CP118128.1 Genbank gene 2337810 2338427 . - . ID=gene-PUW31_11600;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=PUW31_11600 CP118128.1 Protein Homology CDS 2337810 2338427 . - 0 ID=cds-WJH07010.1;Parent=gene-PUW31_11600;Dbxref=NCBI_GP:WJH07010.1;Name=WJH07010.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461197.1;locus_tag=PUW31_11600;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WJH07010.1;transl_table=11 CP118128.1 Genbank gene 2338448 2339050 . - . ID=gene-PUW31_11605;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=PUW31_11605 CP118128.1 Protein Homology CDS 2338448 2339050 . - 0 ID=cds-WJH07011.1;Parent=gene-PUW31_11605;Dbxref=NCBI_GP:WJH07011.1;Name=WJH07011.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461198.1;locus_tag=PUW31_11605;product=cytochrome c-type protein NapC;protein_id=WJH07011.1;transl_table=11 CP118128.1 Genbank gene 2339060 2339509 . - . ID=gene-PUW31_11610;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=PUW31_11610 CP118128.1 Protein Homology CDS 2339060 2339509 . - 0 ID=cds-WJH07012.1;Parent=gene-PUW31_11610;Dbxref=NCBI_GP:WJH07012.1;Name=WJH07012.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461199.1;locus_tag=PUW31_11610;product=nitrate reductase cytochrome c-type subunit;protein_id=WJH07012.1;transl_table=11 CP118128.1 Genbank gene 2339625 2340494 . - . ID=gene-PUW31_11615;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=PUW31_11615 CP118128.1 Protein Homology CDS 2339625 2340494 . - 0 ID=cds-WJH07013.1;Parent=gene-PUW31_11615;Dbxref=NCBI_GP:WJH07013.1;Name=WJH07013.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461200.1;locus_tag=PUW31_11615;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WJH07013.1;transl_table=11 CP118128.1 Genbank gene 2340481 2341176 . - . ID=gene-PUW31_11620;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=PUW31_11620 CP118128.1 Protein Homology CDS 2340481 2341176 . - 0 ID=cds-WJH07014.1;Parent=gene-PUW31_11620;Dbxref=NCBI_GP:WJH07014.1;Name=WJH07014.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461201.1;locus_tag=PUW31_11620;product=ferredoxin-type protein NapG;protein_id=WJH07014.1;transl_table=11 CP118128.1 Genbank gene 2341183 2343669 . - . ID=gene-PUW31_11625;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=PUW31_11625 CP118128.1 Protein Homology CDS 2341183 2343669 . - 0 ID=cds-WJH07015.1;Parent=gene-PUW31_11625;Dbxref=NCBI_GP:WJH07015.1;Name=WJH07015.1;Ontology_term=GO:0008940,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;gene=napA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461202.1;locus_tag=PUW31_11625;product=nitrate reductase catalytic subunit NapA;protein_id=WJH07015.1;transl_table=11 CP118128.1 Genbank gene 2343666 2343929 . - . ID=gene-PUW31_11630;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=PUW31_11630 CP118128.1 Protein Homology CDS 2343666 2343929 . - 0 ID=cds-WJH07016.1;Parent=gene-PUW31_11630;Dbxref=NCBI_GP:WJH07016.1;Name=WJH07016.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461203.1;locus_tag=PUW31_11630;product=chaperone NapD;protein_id=WJH07016.1;transl_table=11 CP118128.1 Genbank gene 2343919 2344410 . - . ID=gene-PUW31_11635;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=PUW31_11635 CP118128.1 Protein Homology CDS 2343919 2344410 . - 0 ID=cds-WJH07017.1;Parent=gene-PUW31_11635;Dbxref=NCBI_GP:WJH07017.1;Name=WJH07017.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461204.1;locus_tag=PUW31_11635;product=ferredoxin-type protein NapF;protein_id=WJH07017.1;transl_table=11 CP118128.1 Genbank gene 2344824 2345318 . + . ID=gene-PUW31_11640;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=PUW31_11640 CP118128.1 Protein Homology CDS 2344824 2345318 . + 0 ID=cds-WJH10729.1;Parent=gene-PUW31_11640;Dbxref=NCBI_GP:WJH10729.1;Name=WJH10729.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461205.1;locus_tag=PUW31_11640;product=serine protease inhibitor ecotin;protein_id=WJH10729.1;transl_table=11 CP118128.1 Genbank gene 2345501 2347144 . - . ID=gene-PUW31_11645;Name=PUW31_11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11645 CP118128.1 Protein Homology CDS 2345501 2347144 . - 0 ID=cds-WJH07018.1;Parent=gene-PUW31_11645;Dbxref=NCBI_GP:WJH07018.1;Name=WJH07018.1;Ontology_term=GO:0015833,GO:0140359,GO:1904680;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461206.1;locus_tag=PUW31_11645;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=WJH07018.1;transl_table=11 CP118128.1 Genbank gene 2347218 2347868 . - . ID=gene-PUW31_11650;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=PUW31_11650 CP118128.1 Protein Homology CDS 2347218 2347868 . - 0 ID=cds-WJH07019.1;Parent=gene-PUW31_11650;Dbxref=NCBI_GP:WJH07019.1;Name=WJH07019.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461207.1;locus_tag=PUW31_11650;product=DNA oxidative demethylase AlkB;protein_id=WJH07019.1;transl_table=11 CP118128.1 Genbank gene 2347871 2348932 . - . ID=gene-PUW31_11655;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=PUW31_11655 CP118128.1 Protein Homology CDS 2347871 2348932 . - 0 ID=cds-WJH07020.1;Parent=gene-PUW31_11655;Dbxref=NCBI_GP:WJH07020.1;Name=WJH07020.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461208.1;locus_tag=PUW31_11655;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WJH07020.1;transl_table=11 CP118128.1 Genbank pseudogene 2349013 2350064 . - . ID=gene-PUW31_11660;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=pseudogene;locus_tag=PUW31_11660;pseudo=true CP118128.1 Protein Homology CDS 2349013 2350064 . - 0 ID=cds-PUW31_11660;Parent=gene-PUW31_11660;Note=frameshifted;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461209.1;locus_tag=PUW31_11660;product=FAD:protein FMN transferase ApbE;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2350179 2351315 . - . ID=gene-PUW31_11665;Name=PUW31_11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11665 CP118128.1 Protein Homology CDS 2350179 2351315 . - 0 ID=cds-WJH07021.1;Parent=gene-PUW31_11665;Dbxref=NCBI_GP:WJH07021.1;Name=WJH07021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461210.1;locus_tag=PUW31_11665;product=porin OmpC;protein_id=WJH07021.1;transl_table=11 CP118128.1 Genbank gene 2352042 2354711 . + . ID=gene-PUW31_11670;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=PUW31_11670 CP118128.1 Protein Homology CDS 2352042 2354711 . + 0 ID=cds-WJH07022.1;Parent=gene-PUW31_11670;Dbxref=NCBI_GP:WJH07022.1;Name=WJH07022.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461211.1;locus_tag=PUW31_11670;product=phosphotransferase RcsD;protein_id=WJH07022.1;transl_table=11 CP118128.1 Genbank gene 2354728 2355378 . + . ID=gene-PUW31_11675;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=PUW31_11675 CP118128.1 Protein Homology CDS 2354728 2355378 . + 0 ID=cds-WJH07023.1;Parent=gene-PUW31_11675;Dbxref=NCBI_GP:WJH07023.1;Name=WJH07023.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461212.1;locus_tag=PUW31_11675;product=response regulator transcription factor RcsB;protein_id=WJH07023.1;transl_table=11 CP118128.1 Genbank gene 2355481 2358327 . - . ID=gene-PUW31_11680;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=PUW31_11680 CP118128.1 Protein Homology CDS 2355481 2358327 . - 0 ID=cds-WJH07024.1;Parent=gene-PUW31_11680;Dbxref=NCBI_GP:WJH07024.1;Name=WJH07024.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461213.1;locus_tag=PUW31_11680;product=two-component system sensor histidine kinase RcsC;protein_id=WJH07024.1;transl_table=11 CP118128.1 Genbank gene 2358445 2361081 . - . ID=gene-PUW31_11685;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=PUW31_11685 CP118128.1 Protein Homology CDS 2358445 2361081 . - 0 ID=cds-WJH07025.1;Parent=gene-PUW31_11685;Dbxref=NCBI_GP:WJH07025.1;Name=WJH07025.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461214.1;locus_tag=PUW31_11685;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WJH07025.1;transl_table=11 CP118128.1 Genbank gene 2361490 2362692 . - . ID=gene-PUW31_11690;Name=PUW31_11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11690 CP118128.1 Protein Homology CDS 2361490 2362692 . - 0 ID=cds-WJH07026.1;Parent=gene-PUW31_11690;Dbxref=NCBI_GP:WJH07026.1;Name=WJH07026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461215.1;locus_tag=PUW31_11690;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WJH07026.1;transl_table=11 CP118128.1 Genbank pseudogene 2362707 2364031 . - . ID=gene-PUW31_11695;Name=PUW31_11695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_11695;pseudo=true CP118128.1 Protein Homology CDS 2362707 2364031 . - 0 ID=cds-PUW31_11695;Parent=gene-PUW31_11695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461216.1;locus_tag=PUW31_11695;product=MFS transporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2364081 2364965 . + . ID=gene-PUW31_11700;Name=PUW31_11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11700 CP118128.1 Protein Homology CDS 2364081 2364965 . + 0 ID=cds-WJH07027.1;Parent=gene-PUW31_11700;Dbxref=NCBI_GP:WJH07027.1;Name=WJH07027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461217.3;locus_tag=PUW31_11700;product=GntR family transcriptional regulator;protein_id=WJH07027.1;transl_table=11 CP118128.1 Genbank gene 2365048 2365776 . + . ID=gene-PUW31_11705;Name=PUW31_11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11705 CP118128.1 Protein Homology CDS 2365048 2365776 . + 0 ID=cds-WJH07028.1;Parent=gene-PUW31_11705;Dbxref=NCBI_GP:WJH07028.1;Name=WJH07028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461218.1;locus_tag=PUW31_11705;product=bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase;protein_id=WJH07028.1;transl_table=11 CP118128.1 Genbank gene 2366131 2368416 . + . ID=gene-PUW31_11710;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=PUW31_11710 CP118128.1 Protein Homology CDS 2366131 2368416 . + 0 ID=cds-WJH07029.1;Parent=gene-PUW31_11710;Dbxref=NCBI_GP:WJH07029.1;Name=WJH07029.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=PUW31_11710;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WJH07029.1;transl_table=11 CP118128.1 Genbank gene 2368529 2369659 . + . ID=gene-PUW31_11715;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=PUW31_11715 CP118128.1 Protein Homology CDS 2368529 2369659 . + 0 ID=cds-WJH07030.1;Parent=gene-PUW31_11715;Dbxref=NCBI_GP:WJH07030.1;Name=WJH07030.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=PUW31_11715;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WJH07030.1;transl_table=11 CP118128.1 Genbank gene 2369659 2369913 . + . ID=gene-PUW31_11720;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=PUW31_11720 CP118128.1 Protein Homology CDS 2369659 2369913 . + 0 ID=cds-WJH07031.1;Parent=gene-PUW31_11720;Dbxref=NCBI_GP:WJH07031.1;Name=WJH07031.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461221.1;locus_tag=PUW31_11720;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WJH07031.1;transl_table=11 CP118128.1 Genbank gene 2369915 2371105 . - . ID=gene-PUW31_11725;Name=PUW31_11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11725 CP118128.1 Protein Homology CDS 2369915 2371105 . - 0 ID=cds-WJH07032.1;Parent=gene-PUW31_11725;Dbxref=NCBI_GP:WJH07032.1;Name=WJH07032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461222.1;locus_tag=PUW31_11725;product=MFS transporter;protein_id=WJH07032.1;transl_table=11 CP118128.1 Genbank gene 2371267 2372145 . + . ID=gene-PUW31_11730;Name=PUW31_11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11730 CP118128.1 Protein Homology CDS 2371267 2372145 . + 0 ID=cds-WJH07033.1;Parent=gene-PUW31_11730;Dbxref=NCBI_GP:WJH07033.1;Name=WJH07033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461223.1;locus_tag=PUW31_11730;product=LysR substrate-binding domain-containing protein;protein_id=WJH07033.1;transl_table=11 CP118128.1 Genbank gene 2372261 2373331 . - . ID=gene-PUW31_11735;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=PUW31_11735 CP118128.1 Protein Homology CDS 2372261 2373331 . - 0 ID=cds-WJH07034.1;Parent=gene-PUW31_11735;Dbxref=NCBI_GP:WJH07034.1;Name=WJH07034.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461224.1;locus_tag=PUW31_11735;product=glycerophosphodiester phosphodiesterase;protein_id=WJH07034.1;transl_table=11 CP118128.1 Genbank gene 2373336 2374694 . - . ID=gene-PUW31_11740;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=PUW31_11740 CP118128.1 Protein Homology CDS 2373336 2374694 . - 0 ID=cds-WJH07035.1;Parent=gene-PUW31_11740;Dbxref=NCBI_GP:WJH07035.1;Name=WJH07035.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461225.1;locus_tag=PUW31_11740;product=glycerol-3-phosphate transporter;protein_id=WJH07035.1;transl_table=11 CP118128.1 Genbank gene 2374967 2376595 . + . ID=gene-PUW31_11745;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=PUW31_11745 CP118128.1 Protein Homology CDS 2374967 2376595 . + 0 ID=cds-WJH07036.1;Parent=gene-PUW31_11745;Dbxref=NCBI_GP:WJH07036.1;Name=WJH07036.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461226.1;locus_tag=PUW31_11745;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WJH07036.1;transl_table=11 CP118128.1 Genbank gene 2376585 2377844 . + . ID=gene-PUW31_11750;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=PUW31_11750 CP118128.1 Protein Homology CDS 2376585 2377844 . + 0 ID=cds-WJH07037.1;Parent=gene-PUW31_11750;Dbxref=NCBI_GP:WJH07037.1;Name=WJH07037.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461227.1;locus_tag=PUW31_11750;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WJH07037.1;transl_table=11 CP118128.1 Genbank gene 2377841 2379031 . + . ID=gene-PUW31_11755;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=PUW31_11755 CP118128.1 Protein Homology CDS 2377841 2379031 . + 0 ID=cds-WJH07038.1;Parent=gene-PUW31_11755;Dbxref=NCBI_GP:WJH07038.1;Name=WJH07038.1;Ontology_term=GO:0006071,GO:0004368,GO:0051536,GO:0009331;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461228.1;locus_tag=PUW31_11755;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WJH07038.1;transl_table=11 CP118128.1 Genbank gene 2379457 2380479 . + . ID=gene-PUW31_11760;Name=sseL;gbkey=Gene;gene=sseL;gene_biotype=protein_coding;locus_tag=PUW31_11760 CP118128.1 Protein Homology CDS 2379457 2380479 . + 0 ID=cds-WJH07039.1;Parent=gene-PUW31_11760;Dbxref=NCBI_GP:WJH07039.1;Name=WJH07039.1;gbkey=CDS;gene=sseL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017745.1;locus_tag=PUW31_11760;product=SPI-2 type III secretion system effector deubiquitinase SseL;protein_id=WJH07039.1;transl_table=11 CP118128.1 Genbank gene 2380566 2380742 . - . ID=gene-PUW31_11765;Name=PUW31_11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11765 CP118128.1 Protein Homology CDS 2380566 2380742 . - 0 ID=cds-WJH07040.1;Parent=gene-PUW31_11765;Dbxref=NCBI_GP:WJH07040.1;Name=WJH07040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461230.1;locus_tag=PUW31_11765;product=molybdopterin-binding protein;protein_id=WJH07040.1;transl_table=11 CP118128.1 Genbank gene 2380748 2381551 . - . ID=gene-PUW31_11770;Name=yfaU;gbkey=Gene;gene=yfaU;gene_biotype=protein_coding;locus_tag=PUW31_11770 CP118128.1 Protein Homology CDS 2380748 2381551 . - 0 ID=cds-WJH07041.1;Parent=gene-PUW31_11770;Dbxref=NCBI_GP:WJH07041.1;Name=WJH07041.1;gbkey=CDS;gene=yfaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461231.1;locus_tag=PUW31_11770;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=WJH07041.1;transl_table=11 CP118128.1 Genbank gene 2381577 2382866 . - . ID=gene-PUW31_11775;Name=PUW31_11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11775 CP118128.1 Protein Homology CDS 2381577 2382866 . - 0 ID=cds-WJH07042.1;Parent=gene-PUW31_11775;Dbxref=NCBI_GP:WJH07042.1;Name=WJH07042.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461232.1;locus_tag=PUW31_11775;product=MFS transporter;protein_id=WJH07042.1;transl_table=11 CP118128.1 Genbank gene 2382922 2384127 . - . ID=gene-PUW31_11780;Name=rhmD;gbkey=Gene;gene=rhmD;gene_biotype=protein_coding;locus_tag=PUW31_11780 CP118128.1 Protein Homology CDS 2382922 2384127 . - 0 ID=cds-WJH07043.1;Parent=gene-PUW31_11780;Dbxref=NCBI_GP:WJH07043.1;Name=WJH07043.1;Ontology_term=GO:0050032;gbkey=CDS;gene=rhmD;go_function=L-rhamnonate dehydratase activity|0050032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416750.2;locus_tag=PUW31_11780;product=L-rhamnonate dehydratase;protein_id=WJH07043.1;transl_table=11 CP118128.1 Genbank gene 2384141 2384923 . - . ID=gene-PUW31_11785;Name=PUW31_11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11785 CP118128.1 Protein Homology CDS 2384141 2384923 . - 0 ID=cds-WJH07044.1;Parent=gene-PUW31_11785;Dbxref=NCBI_GP:WJH07044.1;Name=WJH07044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461234.1;locus_tag=PUW31_11785;product=IclR family transcriptional regulator;protein_id=WJH07044.1;transl_table=11 CP118128.1 Genbank gene 2385173 2386369 . - . ID=gene-PUW31_11790;Name=PUW31_11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11790 CP118128.1 Protein Homology CDS 2385173 2386369 . - 0 ID=cds-WJH07045.1;Parent=gene-PUW31_11790;Dbxref=NCBI_GP:WJH07045.1;Name=WJH07045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461235.1;locus_tag=PUW31_11790;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WJH07045.1;transl_table=11 CP118128.1 Genbank gene 2386484 2386993 . - . ID=gene-PUW31_11795;Name=PUW31_11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11795 CP118128.1 Protein Homology CDS 2386484 2386993 . - 0 ID=cds-WJH07046.1;Parent=gene-PUW31_11795;Dbxref=NCBI_GP:WJH07046.1;Name=WJH07046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000739003.1;locus_tag=PUW31_11795;product=YfaZ family outer membrane protein;protein_id=WJH07046.1;transl_table=11 CP118128.1 Genbank gene 2387306 2387731 . + . ID=gene-PUW31_11800;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=PUW31_11800 CP118128.1 Protein Homology CDS 2387306 2387731 . + 0 ID=cds-WJH07047.1;Parent=gene-PUW31_11800;Dbxref=NCBI_GP:WJH07047.1;Name=WJH07047.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461237.1;locus_tag=PUW31_11800;product=nucleoside triphosphatase NudI;protein_id=WJH07047.1;transl_table=11 CP118128.1 Genbank gene 2387776 2388381 . - . ID=gene-PUW31_11805;Name=pmrG;gbkey=Gene;gene=pmrG;gene_biotype=protein_coding;locus_tag=PUW31_11805 CP118128.1 Protein Homology CDS 2387776 2388381 . - 0 ID=cds-WJH07048.1;Parent=gene-PUW31_11805;Dbxref=NCBI_GP:WJH07048.1;Name=WJH07048.1;gbkey=CDS;gene=pmrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461238.1;locus_tag=PUW31_11805;product=lipopolysaccharide core heptose(II)-phosphate phosphatase PmrG;protein_id=WJH07048.1;transl_table=11 CP118128.1 Genbank gene 2388680 2389819 . + . ID=gene-PUW31_11810;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=PUW31_11810 CP118128.1 Protein Homology CDS 2388680 2389819 . + 0 ID=cds-WJH10730.1;Parent=gene-PUW31_11810;Dbxref=NCBI_GP:WJH10730.1;Name=WJH10730.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=PUW31_11810;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WJH10730.1;transl_table=11 CP118128.1 Genbank gene 2389822 2390805 . + . ID=gene-PUW31_11815;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=PUW31_11815 CP118128.1 Protein Homology CDS 2389822 2390805 . + 0 ID=cds-WJH07049.1;Parent=gene-PUW31_11815;Dbxref=NCBI_GP:WJH07049.1;Name=WJH07049.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461240.1;locus_tag=PUW31_11815;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WJH07049.1;transl_table=11 CP118128.1 Genbank gene 2390802 2392784 . + . ID=gene-PUW31_11820;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=PUW31_11820 CP118128.1 Protein Homology CDS 2390802 2392784 . + 0 ID=cds-WJH07050.1;Parent=gene-PUW31_11820;Dbxref=NCBI_GP:WJH07050.1;Name=WJH07050.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461241.1;locus_tag=PUW31_11820;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WJH07050.1;transl_table=11 CP118128.1 Genbank gene 2392781 2393680 . + . ID=gene-PUW31_11825;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=PUW31_11825 CP118128.1 Protein Homology CDS 2392781 2393680 . + 0 ID=cds-WJH07051.1;Parent=gene-PUW31_11825;Dbxref=NCBI_GP:WJH07051.1;Name=WJH07051.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461242.1;locus_tag=PUW31_11825;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WJH07051.1;transl_table=11 CP118128.1 Genbank gene 2393677 2395323 . + . ID=gene-PUW31_11830;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=PUW31_11830 CP118128.1 Protein Homology CDS 2393677 2395323 . + 0 ID=cds-WJH07052.1;Parent=gene-PUW31_11830;Dbxref=NCBI_GP:WJH07052.1;Name=WJH07052.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461243.1;locus_tag=PUW31_11830;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WJH07052.1;transl_table=11 CP118128.1 Genbank gene 2395320 2395655 . + . ID=gene-PUW31_11835;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=PUW31_11835 CP118128.1 Protein Homology CDS 2395320 2395655 . + 0 ID=cds-WJH07053.1;Parent=gene-PUW31_11835;Dbxref=NCBI_GP:WJH07053.1;Name=WJH07053.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461244.1;locus_tag=PUW31_11835;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WJH07053.1;transl_table=11 CP118128.1 Genbank gene 2395655 2396032 . + . ID=gene-PUW31_11840;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=PUW31_11840 CP118128.1 Protein Homology CDS 2395655 2396032 . + 0 ID=cds-WJH07054.1;Parent=gene-PUW31_11840;Dbxref=NCBI_GP:WJH07054.1;Name=WJH07054.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461245.1;locus_tag=PUW31_11840;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WJH07054.1;transl_table=11 CP118128.1 Genbank gene 2396027 2396284 . - . ID=gene-PUW31_11845;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=PUW31_11845 CP118128.1 Protein Homology CDS 2396027 2396284 . - 0 ID=cds-WJH07055.1;Parent=gene-PUW31_11845;Dbxref=NCBI_GP:WJH07055.1;Name=WJH07055.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461246.1;locus_tag=PUW31_11845;product=signal transduction protein PmrD;protein_id=WJH07055.1;transl_table=11 CP118128.1 Genbank gene 2396382 2397749 . - . ID=gene-PUW31_11850;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=PUW31_11850 CP118128.1 Protein Homology CDS 2396382 2397749 . - 0 ID=cds-WJH07056.1;Parent=gene-PUW31_11850;Dbxref=NCBI_GP:WJH07056.1;Name=WJH07056.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461247.1;locus_tag=PUW31_11850;product=o-succinylbenzoate--CoA ligase;protein_id=WJH07056.1;transl_table=11 CP118128.1 Genbank gene 2397746 2398708 . - . ID=gene-PUW31_11855;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=PUW31_11855 CP118128.1 Protein Homology CDS 2397746 2398708 . - 0 ID=cds-WJH07057.1;Parent=gene-PUW31_11855;Dbxref=NCBI_GP:WJH07057.1;Name=WJH07057.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461248.1;locus_tag=PUW31_11855;product=o-succinylbenzoate synthase;protein_id=WJH07057.1;transl_table=11 CP118128.1 Genbank gene 2398708 2399565 . - . ID=gene-PUW31_11860;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=PUW31_11860 CP118128.1 Protein Homology CDS 2398708 2399565 . - 0 ID=cds-WJH07058.1;Parent=gene-PUW31_11860;Dbxref=NCBI_GP:WJH07058.1;Name=WJH07058.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=PUW31_11860;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WJH07058.1;transl_table=11 CP118128.1 Genbank gene 2399580 2400338 . - . ID=gene-PUW31_11865;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=PUW31_11865 CP118128.1 Protein Homology CDS 2399580 2400338 . - 0 ID=cds-WJH07059.1;Parent=gene-PUW31_11865;Dbxref=NCBI_GP:WJH07059.1;Name=WJH07059.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461250.1;locus_tag=PUW31_11865;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WJH07059.1;transl_table=11 CP118128.1 Genbank pseudogene 2400335 2402004 . - . ID=gene-PUW31_11870;Name=menD;gbkey=Gene;gene=menD;gene_biotype=pseudogene;locus_tag=PUW31_11870;pseudo=true CP118128.1 Protein Homology CDS 2400335 2402004 . - 0 ID=cds-PUW31_11870;Parent=gene-PUW31_11870;Note=frameshifted;Ontology_term=GO:0009234,GO:0070204;gbkey=CDS;gene=menD;go_function=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461251.1;locus_tag=PUW31_11870;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2402090 2403385 . - . ID=gene-PUW31_11875;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=PUW31_11875 CP118128.1 Protein Homology CDS 2402090 2403385 . - 0 ID=cds-WJH07060.1;Parent=gene-PUW31_11875;Dbxref=NCBI_GP:WJH07060.1;Name=WJH07060.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461252.1;locus_tag=PUW31_11875;product=isochorismate synthase MenF;protein_id=WJH07060.1;transl_table=11 CP118128.1 Genbank gene 2403486 2403791 . - . ID=gene-PUW31_11880;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=PUW31_11880 CP118128.1 Protein Homology CDS 2403486 2403791 . - 0 ID=cds-WJH07061.1;Parent=gene-PUW31_11880;Dbxref=NCBI_GP:WJH07061.1;Name=WJH07061.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=PUW31_11880;product=stress response protein ElaB;protein_id=WJH07061.1;transl_table=11 CP118128.1 Genbank gene 2403846 2404307 . - . ID=gene-PUW31_11885;Name=PUW31_11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11885 CP118128.1 Protein Homology CDS 2403846 2404307 . - 0 ID=cds-WJH07062.1;Parent=gene-PUW31_11885;Dbxref=NCBI_GP:WJH07062.1;Name=WJH07062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461254.1;locus_tag=PUW31_11885;product=GNAT family N-acetyltransferase;protein_id=WJH07062.1;transl_table=11 CP118128.1 Genbank gene 2404368 2405285 . + . ID=gene-PUW31_11890;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=PUW31_11890 CP118128.1 Protein Homology CDS 2404368 2405285 . + 0 ID=cds-WJH07063.1;Parent=gene-PUW31_11890;Dbxref=NCBI_GP:WJH07063.1;Name=WJH07063.1;Ontology_term=GO:0042779,GO:0016891;gbkey=CDS;gene=rbn;go_function=endoribonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-trailer cleavage|0042779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461255.1;locus_tag=PUW31_11890;product=ribonuclease BN;protein_id=WJH07063.1;transl_table=11 CP118128.1 Genbank gene 2405351 2406352 . + . ID=gene-PUW31_11895;Name=PUW31_11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11895 CP118128.1 Protein Homology CDS 2405351 2406352 . + 0 ID=cds-WJH07064.1;Parent=gene-PUW31_11895;Dbxref=NCBI_GP:WJH07064.1;Name=WJH07064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461256.1;locus_tag=PUW31_11895;product=chemotaxis protein;protein_id=WJH07064.1;transl_table=11 CP118128.1 Genbank gene 2406393 2408183 . - . ID=gene-PUW31_11900;Name=PUW31_11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11900 CP118128.1 Protein Homology CDS 2406393 2408183 . - 0 ID=cds-WJH07065.1;Parent=gene-PUW31_11900;Dbxref=NCBI_GP:WJH07065.1;Name=WJH07065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461257.1;locus_tag=PUW31_11900;product=VWA domain-containing protein;protein_id=WJH07065.1;transl_table=11 CP118128.1 Genbank gene 2408652 2408810 . + . ID=gene-PUW31_11905;Name=PUW31_11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11905 CP118128.1 Protein Homology CDS 2408652 2408810 . + 0 ID=cds-WJH10731.1;Parent=gene-PUW31_11905;Dbxref=NCBI_GP:WJH10731.1;Name=WJH10731.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020544.2;locus_tag=PUW31_11905;product=DUF1877 family protein;protein_id=WJH10731.1;transl_table=11 CP118128.1 Genbank pseudogene 2409072 2410528 . - . ID=gene-PUW31_11910;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=pseudogene;locus_tag=PUW31_11910;pseudo=true CP118128.1 Protein Homology CDS 2409072 2410528 . - 0 ID=cds-PUW31_11910;Parent=gene-PUW31_11910;Note=frameshifted;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=PUW31_11910;product=NADH-quinone oxidoreductase subunit NuoN;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2410535 2412064 . - . ID=gene-PUW31_11915;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=PUW31_11915 CP118128.1 Protein Homology CDS 2410535 2412064 . - 0 ID=cds-WJH07066.1;Parent=gene-PUW31_11915;Dbxref=NCBI_GP:WJH07066.1;Name=WJH07066.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=PUW31_11915;product=NADH-quinone oxidoreductase subunit M;protein_id=WJH07066.1;transl_table=11 CP118128.1 Genbank gene 2412378 2414219 . - . ID=gene-PUW31_11920;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=PUW31_11920 CP118128.1 Protein Homology CDS 2412378 2414219 . - 0 ID=cds-WJH07067.1;Parent=gene-PUW31_11920;Dbxref=NCBI_GP:WJH07067.1;Name=WJH07067.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=PUW31_11920;product=NADH-quinone oxidoreductase subunit L;protein_id=WJH07067.1;transl_table=11 CP118128.1 Genbank gene 2414216 2414518 . - . ID=gene-PUW31_11925;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=PUW31_11925 CP118128.1 Protein Homology CDS 2414216 2414518 . - 0 ID=cds-WJH07068.1;Parent=gene-PUW31_11925;Dbxref=NCBI_GP:WJH07068.1;Name=WJH07068.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=PUW31_11925;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WJH07068.1;transl_table=11 CP118128.1 Genbank gene 2414515 2415069 . - . ID=gene-PUW31_11930;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=PUW31_11930 CP118128.1 Protein Homology CDS 2414515 2415069 . - 0 ID=cds-WJH07069.1;Parent=gene-PUW31_11930;Dbxref=NCBI_GP:WJH07069.1;Name=WJH07069.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461262.1;locus_tag=PUW31_11930;product=NADH-quinone oxidoreductase subunit J;protein_id=WJH07069.1;transl_table=11 CP118128.1 Genbank gene 2415080 2415622 . - . ID=gene-PUW31_11935;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=PUW31_11935 CP118128.1 Protein Homology CDS 2415080 2415622 . - 0 ID=cds-WJH07070.1;Parent=gene-PUW31_11935;Dbxref=NCBI_GP:WJH07070.1;Name=WJH07070.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=PUW31_11935;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WJH07070.1;transl_table=11 CP118128.1 Genbank gene 2415637 2416614 . - . ID=gene-PUW31_11940;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=PUW31_11940 CP118128.1 Protein Homology CDS 2415637 2416614 . - 0 ID=cds-WJH07071.1;Parent=gene-PUW31_11940;Dbxref=NCBI_GP:WJH07071.1;Name=WJH07071.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=PUW31_11940;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WJH07071.1;transl_table=11 CP118128.1 Genbank pseudogene 2416611 2419336 . - . ID=gene-PUW31_11945;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=pseudogene;locus_tag=PUW31_11945;pseudo=true CP118128.1 Protein Homology CDS 2416611 2419336 . - 0 ID=cds-PUW31_11945;Parent=gene-PUW31_11945;Note=frameshifted;Ontology_term=GO:0006120,GO:0050136;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=PUW31_11945;product=NADH-quinone oxidoreductase subunit NuoG;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2419367 2420704 . - . ID=gene-PUW31_11950;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=PUW31_11950 CP118128.1 Protein Homology CDS 2419367 2420704 . - 0 ID=cds-WJH07072.1;Parent=gene-PUW31_11950;Dbxref=NCBI_GP:WJH07072.1;Name=WJH07072.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461266.1;locus_tag=PUW31_11950;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WJH07072.1;transl_table=11 CP118128.1 Genbank gene 2420701 2421201 . - . ID=gene-PUW31_11955;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=PUW31_11955 CP118128.1 Protein Homology CDS 2420701 2421201 . - 0 ID=cds-WJH07073.1;Parent=gene-PUW31_11955;Dbxref=NCBI_GP:WJH07073.1;Name=WJH07073.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461267.1;locus_tag=PUW31_11955;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WJH07073.1;transl_table=11 CP118128.1 Genbank gene 2421204 2423006 . - . ID=gene-PUW31_11960;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=PUW31_11960 CP118128.1 Protein Homology CDS 2421204 2423006 . - 0 ID=cds-WJH07074.1;Parent=gene-PUW31_11960;Dbxref=NCBI_GP:WJH07074.1;Name=WJH07074.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH dehydrogenase (quinone) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461268.1;locus_tag=PUW31_11960;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WJH07074.1;transl_table=11 CP118128.1 Genbank gene 2423093 2423755 . - . ID=gene-PUW31_11965;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=PUW31_11965 CP118128.1 Protein Homology CDS 2423093 2423755 . - 0 ID=cds-WJH07075.1;Parent=gene-PUW31_11965;Dbxref=NCBI_GP:WJH07075.1;Name=WJH07075.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461269.1;locus_tag=PUW31_11965;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WJH07075.1;transl_table=11 CP118128.1 Genbank gene 2423771 2424214 . - . ID=gene-PUW31_11970;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=PUW31_11970 CP118128.1 Protein Homology CDS 2423771 2424214 . - 0 ID=cds-WJH07076.1;Parent=gene-PUW31_11970;Dbxref=NCBI_GP:WJH07076.1;Name=WJH07076.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461270.1;locus_tag=PUW31_11970;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WJH07076.1;transl_table=11 CP118128.1 Genbank gene 2424608 2424760 . - . ID=gene-PUW31_11975;Name=PUW31_11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11975 CP118128.1 Protein Homology CDS 2424608 2424760 . - 0 ID=cds-WJH07077.1;Parent=gene-PUW31_11975;Dbxref=NCBI_GP:WJH07077.1;Name=WJH07077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461271.1;locus_tag=PUW31_11975;product=hypothetical protein;protein_id=WJH07077.1;transl_table=11 CP118128.1 Genbank gene 2424840 2425778 . - . ID=gene-PUW31_11980;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=PUW31_11980 CP118128.1 Protein Homology CDS 2424840 2425778 . - 0 ID=cds-WJH07078.1;Parent=gene-PUW31_11980;Dbxref=NCBI_GP:WJH07078.1;Name=WJH07078.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461272.1;locus_tag=PUW31_11980;product=transcriptional regulator LrhA;protein_id=WJH07078.1;transl_table=11 CP118128.1 Genbank gene 2426710 2427924 . + . ID=gene-PUW31_11985;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=PUW31_11985 CP118128.1 Protein Homology CDS 2426710 2427924 . + 0 ID=cds-WJH07079.1;Parent=gene-PUW31_11985;Dbxref=NCBI_GP:WJH07079.1;Name=WJH07079.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461273.1;locus_tag=PUW31_11985;product=alanine transaminase AlaA;protein_id=WJH07079.1;transl_table=11 CP118128.1 Genbank gene 2428018 2428617 . + . ID=gene-PUW31_11990;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=PUW31_11990 CP118128.1 Protein Homology CDS 2428018 2428617 . + 0 ID=cds-WJH07080.1;Parent=gene-PUW31_11990;Dbxref=NCBI_GP:WJH07080.1;Name=WJH07080.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461274.1;locus_tag=PUW31_11990;product=5'-deoxynucleotidase;protein_id=WJH07080.1;transl_table=11 CP118128.1 Genbank gene 2428723 2430549 . - . ID=gene-PUW31_11995;Name=PUW31_11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_11995 CP118128.1 Protein Homology CDS 2428723 2430549 . - 0 ID=cds-WJH07081.1;Parent=gene-PUW31_11995;Dbxref=NCBI_GP:WJH07081.1;Name=WJH07081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461275.1;locus_tag=PUW31_11995;product=SLC13 family permease;protein_id=WJH07081.1;transl_table=11 CP118128.1 Genbank gene 2430626 2431303 . - . ID=gene-PUW31_12000;Name=PUW31_12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12000 CP118128.1 Protein Homology CDS 2430626 2431303 . - 0 ID=cds-WJH10732.1;Parent=gene-PUW31_12000;Dbxref=NCBI_GP:WJH10732.1;Name=WJH10732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461276.3;locus_tag=PUW31_12000;product=sugar phosphatase;protein_id=WJH10732.1;transl_table=11 CP118128.1 Genbank gene 2431296 2431790 . - . ID=gene-PUW31_12005;Name=PUW31_12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12005 CP118128.1 Protein Homology CDS 2431296 2431790 . - 0 ID=cds-WJH07082.1;Parent=gene-PUW31_12005;Dbxref=NCBI_GP:WJH07082.1;Name=WJH07082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=PUW31_12005;product=YfbU family protein;protein_id=WJH07082.1;transl_table=11 CP118128.1 Genbank gene 2431873 2432328 . - . ID=gene-PUW31_12010;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=PUW31_12010 CP118128.1 Protein Homology CDS 2431873 2432328 . - 0 ID=cds-WJH07083.1;Parent=gene-PUW31_12010;Dbxref=NCBI_GP:WJH07083.1;Name=WJH07083.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=PUW31_12010;product=terminus macrodomain insulation protein YfbV;protein_id=WJH07083.1;transl_table=11 CP118128.1 Genbank gene 2432667 2433869 . + . ID=gene-PUW31_12015;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=PUW31_12015 CP118128.1 Protein Homology CDS 2432667 2433869 . + 0 ID=cds-WJH07084.1;Parent=gene-PUW31_12015;Dbxref=NCBI_GP:WJH07084.1;Name=WJH07084.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=PUW31_12015;product=acetate kinase;protein_id=WJH07084.1;transl_table=11 CP118128.1 Genbank gene 2433946 2436090 . + . ID=gene-PUW31_12020;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=PUW31_12020 CP118128.1 Protein Homology CDS 2433946 2436090 . + 0 ID=cds-WJH07085.1;Parent=gene-PUW31_12020;Dbxref=NCBI_GP:WJH07085.1;Name=WJH07085.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461280.1;locus_tag=PUW31_12020;product=phosphate acetyltransferase;protein_id=WJH07085.1;transl_table=11 CP118128.1 Genbank gene 2436308 2437828 . + . ID=gene-PUW31_12025;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=PUW31_12025 CP118128.1 Protein Homology CDS 2436308 2437828 . + 0 ID=cds-WJH07086.1;Parent=gene-PUW31_12025;Dbxref=NCBI_GP:WJH07086.1;Name=WJH07086.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461281.1;locus_tag=PUW31_12025;product=putative basic amino acid antiporter YfcC;protein_id=WJH07086.1;transl_table=11 CP118128.1 Genbank gene 2437877 2438830 . - . ID=gene-PUW31_12030;Name=PUW31_12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12030 CP118128.1 Protein Homology CDS 2437877 2438830 . - 0 ID=cds-WJH07087.1;Parent=gene-PUW31_12030;Dbxref=NCBI_GP:WJH07087.1;Name=WJH07087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461282.1;locus_tag=PUW31_12030;product=transketolase family protein;protein_id=WJH07087.1;transl_table=11 CP118128.1 Genbank pseudogene 2438823 2439652 . - . ID=gene-PUW31_12035;Name=PUW31_12035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_12035;pseudo=true CP118128.1 Protein Homology CDS 2438823 2439652 . - 0 ID=cds-PUW31_12035;Parent=gene-PUW31_12035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461283.1;locus_tag=PUW31_12035;product=transketolase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2439649 2441040 . - . ID=gene-PUW31_12040;Name=PUW31_12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12040 CP118128.1 Protein Homology CDS 2439649 2441040 . - 0 ID=cds-WJH07088.1;Parent=gene-PUW31_12040;Dbxref=NCBI_GP:WJH07088.1;Name=WJH07088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461284.3;locus_tag=PUW31_12040;product=PTS ascorbate transporter subunit IIC;protein_id=WJH07088.1;transl_table=11 CP118128.1 Genbank gene 2441061 2441333 . - . ID=gene-PUW31_12045;Name=PUW31_12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12045 CP118128.1 Protein Homology CDS 2441061 2441333 . - 0 ID=cds-WJH07089.1;Parent=gene-PUW31_12045;Dbxref=NCBI_GP:WJH07089.1;Name=WJH07089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461285.1;locus_tag=PUW31_12045;product=PTS sugar transporter subunit IIB;protein_id=WJH07089.1;transl_table=11 CP118128.1 Genbank gene 2441414 2441857 . - . ID=gene-PUW31_12050;Name=PUW31_12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12050 CP118128.1 Protein Homology CDS 2441414 2441857 . - 0 ID=cds-WJH07090.1;Parent=gene-PUW31_12050;Dbxref=NCBI_GP:WJH07090.1;Name=WJH07090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461286.1;locus_tag=PUW31_12050;product=PTS sugar transporter subunit IIA;protein_id=WJH07090.1;transl_table=11 CP118128.1 Genbank gene 2442110 2443129 . + . ID=gene-PUW31_12055;Name=PUW31_12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12055 CP118128.1 Protein Homology CDS 2442110 2443129 . + 0 ID=cds-WJH07091.1;Parent=gene-PUW31_12055;Dbxref=NCBI_GP:WJH07091.1;Name=WJH07091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461287.1;locus_tag=PUW31_12055;product=LacI family DNA-binding transcriptional regulator;protein_id=WJH07091.1;transl_table=11 CP118128.1 Genbank gene 2443135 2443689 . - . ID=gene-PUW31_12060;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=PUW31_12060 CP118128.1 Protein Homology CDS 2443135 2443689 . - 0 ID=cds-WJH07092.1;Parent=gene-PUW31_12060;Dbxref=NCBI_GP:WJH07092.1;Name=WJH07092.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461288.1;locus_tag=PUW31_12060;product=NUDIX hydrolase YfcD;protein_id=WJH07092.1;transl_table=11 CP118128.1 Genbank gene 2443746 2444297 . - . ID=gene-PUW31_12065;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=PUW31_12065 CP118128.1 Protein Homology CDS 2443746 2444297 . - 0 ID=cds-WJH07093.1;Parent=gene-PUW31_12065;Dbxref=NCBI_GP:WJH07093.1;Name=WJH07093.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461289.1;locus_tag=PUW31_12065;product=phosphodiesterase;protein_id=WJH07093.1;transl_table=11 CP118128.1 Genbank gene 2444353 2444997 . - . ID=gene-PUW31_12070;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=PUW31_12070 CP118128.1 Protein Homology CDS 2444353 2444997 . - 0 ID=cds-WJH07094.1;Parent=gene-PUW31_12070;Dbxref=NCBI_GP:WJH07094.1;Name=WJH07094.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461290.1;locus_tag=PUW31_12070;product=glutathione transferase;protein_id=WJH07094.1;transl_table=11 CP118128.1 Genbank gene 2445140 2445787 . + . ID=gene-PUW31_12075;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=PUW31_12075 CP118128.1 Protein Homology CDS 2445140 2445787 . + 0 ID=cds-WJH07095.1;Parent=gene-PUW31_12075;Dbxref=NCBI_GP:WJH07095.1;Name=WJH07095.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461291.1;locus_tag=PUW31_12075;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WJH07095.1;transl_table=11 CP118128.1 Genbank gene 2445913 2446806 . + . ID=gene-PUW31_12080;Name=PUW31_12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12080 CP118128.1 Protein Homology CDS 2445913 2446806 . + 0 ID=cds-WJH07096.1;Parent=gene-PUW31_12080;Dbxref=NCBI_GP:WJH07096.1;Name=WJH07096.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461292.1;locus_tag=PUW31_12080;product=TIGR01777 family oxidoreductase;protein_id=WJH07096.1;transl_table=11 CP118128.1 Genbank gene 2446858 2447631 . - . ID=gene-PUW31_12085;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=PUW31_12085 CP118128.1 Protein Homology CDS 2446858 2447631 . - 0 ID=cds-WJH10733.1;Parent=gene-PUW31_12085;Dbxref=NCBI_GP:WJH10733.1;Name=WJH10733.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=PUW31_12085;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WJH10733.1;transl_table=11 CP118128.1 Genbank pseudogene 2447645 2448351 . - . ID=gene-PUW31_12090;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=pseudogene;locus_tag=PUW31_12090;pseudo=true CP118128.1 Protein Homology CDS 2447645 2448351 . - 0 ID=cds-PUW31_12090;Parent=gene-PUW31_12090;Note=frameshifted;gbkey=CDS;gene=hisM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461294.1;locus_tag=PUW31_12090;product=histidine ABC transporter permease HisM;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2448348 2449034 . - . ID=gene-PUW31_12095;Name=PUW31_12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12095 CP118128.1 Protein Homology CDS 2448348 2449034 . - 0 ID=cds-WJH07097.1;Parent=gene-PUW31_12095;Dbxref=NCBI_GP:WJH07097.1;Name=WJH07097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=PUW31_12095;product=histidine ABC transporter permease HisQ;protein_id=WJH07097.1;transl_table=11 CP118128.1 Genbank gene 2449217 2449999 . - . ID=gene-PUW31_12100;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=PUW31_12100 CP118128.1 Protein Homology CDS 2449217 2449999 . - 0 ID=cds-WJH07098.1;Parent=gene-PUW31_12100;Dbxref=NCBI_GP:WJH07098.1;Name=WJH07098.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461296.1;locus_tag=PUW31_12100;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WJH07098.1;transl_table=11 CP118128.1 Genbank gene 2450237 2451019 . - . ID=gene-PUW31_12105;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=PUW31_12105 CP118128.1 Protein Homology CDS 2450237 2451019 . - 0 ID=cds-WJH07099.1;Parent=gene-PUW31_12105;Dbxref=NCBI_GP:WJH07099.1;Name=WJH07099.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461297.1;locus_tag=PUW31_12105;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WJH07099.1;transl_table=11 CP118128.1 Genbank gene 2451308 2451877 . - . ID=gene-PUW31_12110;Name=PUW31_12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12110 CP118128.1 Protein Homology CDS 2451308 2451877 . - 0 ID=cds-WJH07100.1;Parent=gene-PUW31_12110;Dbxref=NCBI_GP:WJH07100.1;Name=WJH07100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461298.1;locus_tag=PUW31_12110;product=UbiX family flavin prenyltransferase;protein_id=WJH07100.1;transl_table=11 CP118128.1 Genbank gene 2451904 2453310 . - . ID=gene-PUW31_12115;Name=PUW31_12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12115 CP118128.1 Protein Homology CDS 2451904 2453310 . - 0 ID=cds-WJH07101.1;Parent=gene-PUW31_12115;Dbxref=NCBI_GP:WJH07101.1;Name=WJH07101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461299.1;locus_tag=PUW31_12115;product=amino acid permease;protein_id=WJH07101.1;transl_table=11 CP118128.1 Genbank gene 2453374 2454477 . - . ID=gene-PUW31_12120;Name=PUW31_12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12120 CP118128.1 Protein Homology CDS 2453374 2454477 . - 0 ID=cds-WJH07102.1;Parent=gene-PUW31_12120;Dbxref=NCBI_GP:WJH07102.1;Name=WJH07102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461300.1;locus_tag=PUW31_12120;product=alanine/ornithine racemase family PLP-dependent enzyme;protein_id=WJH07102.1;transl_table=11 CP118128.1 Genbank pseudogene 2454479 2455900 . - . ID=gene-PUW31_12125;Name=PUW31_12125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_12125;pseudo=true CP118128.1 Protein Homology CDS 2454479 2455900 . - 0 ID=cds-PUW31_12125;Parent=gene-PUW31_12125;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461301.1;locus_tag=PUW31_12125;product=APC family permease;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2455991 2457388 . - . ID=gene-PUW31_12130;Name=PUW31_12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12130 CP118128.1 Protein Homology CDS 2455991 2457388 . - 0 ID=cds-WJH07103.1;Parent=gene-PUW31_12130;Dbxref=NCBI_GP:WJH07103.1;Name=WJH07103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461302.1;locus_tag=PUW31_12130;product=alanine racemase;protein_id=WJH07103.1;transl_table=11 CP118128.1 Genbank pseudogene 2457599 2459025 . + . ID=gene-PUW31_12135;Name=PUW31_12135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_12135;pseudo=true CP118128.1 Protein Homology CDS 2457599 2459025 . + 0 ID=cds-PUW31_12135;Parent=gene-PUW31_12135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461303.1;locus_tag=PUW31_12135;product=sigma-54-dependent Fis family transcriptional regulator;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2459061 2460578 . - . ID=gene-PUW31_12140;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=PUW31_12140 CP118128.1 Protein Homology CDS 2459061 2460578 . - 0 ID=cds-WJH07104.1;Parent=gene-PUW31_12140;Dbxref=NCBI_GP:WJH07104.1;Name=WJH07104.1;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=PUW31_12140;product=amidophosphoribosyltransferase;protein_id=WJH07104.1;transl_table=11 CP118128.1 Genbank gene 2460616 2461104 . - . ID=gene-PUW31_12145;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=PUW31_12145 CP118128.1 Protein Homology CDS 2460616 2461104 . - 0 ID=cds-WJH07105.1;Parent=gene-PUW31_12145;Dbxref=NCBI_GP:WJH07105.1;Name=WJH07105.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461305.1;locus_tag=PUW31_12145;product=colicin V production protein;protein_id=WJH07105.1;transl_table=11 CP118128.1 Genbank gene 2461415 2462089 . - . ID=gene-PUW31_12150;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=PUW31_12150 CP118128.1 Protein Homology CDS 2461415 2462089 . - 0 ID=cds-WJH07106.1;Parent=gene-PUW31_12150;Dbxref=NCBI_GP:WJH07106.1;Name=WJH07106.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461306.1;locus_tag=PUW31_12150;product=cell division protein DedD;protein_id=WJH07106.1;transl_table=11 CP118128.1 Genbank pseudogene 2462079 2463345 . - . ID=gene-PUW31_12155;Name=folC;gbkey=Gene;gene=folC;gene_biotype=pseudogene;locus_tag=PUW31_12155;pseudo=true CP118128.1 Protein Homology CDS 2462079 2463345 . - 0 ID=cds-PUW31_12155;Parent=gene-PUW31_12155;Note=frameshifted;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461307.1;locus_tag=PUW31_12155;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2463413 2464326 . - . ID=gene-PUW31_12160;Name=accD;gbkey=Gene;gene=accD;gene_biotype=pseudogene;locus_tag=PUW31_12160;pseudo=true CP118128.1 Protein Homology CDS 2463413 2464326 . - 0 ID=cds-PUW31_12160;Parent=gene-PUW31_12160;Note=frameshifted;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461308.1;locus_tag=PUW31_12160;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2464476 2465135 . - . ID=gene-PUW31_12165;Name=PUW31_12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12165 CP118128.1 Protein Homology CDS 2464476 2465135 . - 0 ID=cds-WJH07107.1;Parent=gene-PUW31_12165;Dbxref=NCBI_GP:WJH07107.1;Name=WJH07107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461309.1;locus_tag=PUW31_12165;product=DedA family protein;protein_id=WJH07107.1;transl_table=11 CP118128.1 Genbank gene 2465184 2465996 . - . ID=gene-PUW31_12170;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=PUW31_12170 CP118128.1 Protein Homology CDS 2465184 2465996 . - 0 ID=cds-WJH07108.1;Parent=gene-PUW31_12170;Dbxref=NCBI_GP:WJH07108.1;Name=WJH07108.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461310.1;locus_tag=PUW31_12170;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WJH07108.1;transl_table=11 CP118128.1 Genbank gene 2465996 2467009 . - . ID=gene-PUW31_12175;Name=PUW31_12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12175 CP118128.1 Protein Homology CDS 2465996 2467009 . - 0 ID=cds-WJH07109.1;Parent=gene-PUW31_12175;Dbxref=NCBI_GP:WJH07109.1;Name=WJH07109.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461311.1;locus_tag=PUW31_12175;product=aspartate-semialdehyde dehydrogenase;protein_id=WJH07109.1;transl_table=11 CP118128.1 Genbank gene 2467077 2468213 . - . ID=gene-PUW31_12180;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=PUW31_12180 CP118128.1 Protein Homology CDS 2467077 2468213 . - 0 ID=cds-WJH07110.1;Parent=gene-PUW31_12180;Dbxref=NCBI_GP:WJH07110.1;Name=WJH07110.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461312.1;locus_tag=PUW31_12180;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WJH07110.1;transl_table=11 CP118128.1 Genbank pseudogene 2468317 2469317 . + . ID=gene-PUW31_12185;Name=flk;gbkey=Gene;gene=flk;gene_biotype=pseudogene;locus_tag=PUW31_12185;pseudo=true CP118128.1 Protein Homology CDS 2468317 2469317 . + 0 ID=cds-PUW31_12185;Parent=gene-PUW31_12185;Note=frameshifted;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461313.1;locus_tag=PUW31_12185;product=flagella biosynthesis regulator Flk;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2469314 2470491 . - . ID=gene-PUW31_12190;Name=PUW31_12190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_12190;pseudo=true CP118128.1 Protein Homology CDS 2469314 2470491 . - 0 ID=cds-PUW31_12190;Parent=gene-PUW31_12190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461314.1;locus_tag=PUW31_12190;product=MFS transporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2470671 2471045 . - . ID=gene-PUW31_12195;Name=PUW31_12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12195 CP118128.1 Protein Homology CDS 2470671 2471045 . - 0 ID=cds-WJH07111.1;Parent=gene-PUW31_12195;Dbxref=NCBI_GP:WJH07111.1;Name=WJH07111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461315.1;locus_tag=PUW31_12195;product=hypothetical protein;protein_id=WJH07111.1;transl_table=11 CP118128.1 Genbank gene 2471218 2471466 . + . ID=gene-PUW31_12200;Name=PUW31_12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12200 CP118128.1 Protein Homology CDS 2471218 2471466 . + 0 ID=cds-WJH07112.1;Parent=gene-PUW31_12200;Dbxref=NCBI_GP:WJH07112.1;Name=WJH07112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461316.1;locus_tag=PUW31_12200;product=transcriptional regulator;protein_id=WJH07112.1;transl_table=11 CP118128.1 Genbank gene 2471635 2472003 . + . ID=gene-PUW31_12205;Name=PUW31_12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12205 CP118128.1 Protein Homology CDS 2471635 2472003 . + 0 ID=cds-WJH07113.1;Parent=gene-PUW31_12205;Dbxref=NCBI_GP:WJH07113.1;Name=WJH07113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461317.1;locus_tag=PUW31_12205;product=NlpC/P60 family protein;protein_id=WJH07113.1;transl_table=11 CP118128.1 Genbank gene 2472003 2472521 . + . ID=gene-PUW31_12210;Name=PUW31_12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12210 CP118128.1 Protein Homology CDS 2472003 2472521 . + 0 ID=cds-WJH07114.1;Parent=gene-PUW31_12210;Dbxref=NCBI_GP:WJH07114.1;Name=WJH07114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461318.1;locus_tag=PUW31_12210;product=YbjP/YqhG family protein;protein_id=WJH07114.1;transl_table=11 CP118128.1 Genbank gene 2472588 2473244 . - . ID=gene-PUW31_12215;Name=PUW31_12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12215 CP118128.1 Protein Homology CDS 2472588 2473244 . - 0 ID=cds-WJH07115.1;Parent=gene-PUW31_12215;Dbxref=NCBI_GP:WJH07115.1;Name=WJH07115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461319.1;locus_tag=PUW31_12215;product=type II CAAX endopeptidase family protein;protein_id=WJH07115.1;transl_table=11 CP118128.1 Genbank gene 2473342 2474556 . - . ID=gene-PUW31_12220;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=PUW31_12220 CP118128.1 Protein Homology CDS 2473342 2474556 . - 0 ID=cds-WJH07116.1;Parent=gene-PUW31_12220;Dbxref=NCBI_GP:WJH07116.1;Name=WJH07116.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461320.1;locus_tag=PUW31_12220;product=beta-ketoacyl-ACP synthase I;protein_id=WJH07116.1;transl_table=11 CP118128.1 Genbank gene 2474716 2476716 . + . ID=gene-PUW31_12225;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=PUW31_12225 CP118128.1 Protein Homology CDS 2474716 2476716 . + 0 ID=cds-WJH07117.1;Parent=gene-PUW31_12225;Dbxref=NCBI_GP:WJH07117.1;Name=WJH07117.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540542.1;locus_tag=PUW31_12225;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WJH07117.1;transl_table=11 CP118128.1 Genbank gene 2476768 2477043 . - . ID=gene-PUW31_12230;Name=PUW31_12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12230 CP118128.1 Protein Homology CDS 2476768 2477043 . - 0 ID=cds-WJH07118.1;Parent=gene-PUW31_12230;Dbxref=NCBI_GP:WJH07118.1;Name=WJH07118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461322.1;locus_tag=PUW31_12230;product=YfcL family protein;protein_id=WJH07118.1;transl_table=11 CP118128.1 Genbank gene 2477076 2477624 . - . ID=gene-PUW31_12235;Name=PUW31_12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12235 CP118128.1 Protein Homology CDS 2477076 2477624 . - 0 ID=cds-WJH07119.1;Parent=gene-PUW31_12235;Dbxref=NCBI_GP:WJH07119.1;Name=WJH07119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461323.1;locus_tag=PUW31_12235;product=elongation factor P hydroxylase;protein_id=WJH07119.1;transl_table=11 CP118128.1 Genbank gene 2477624 2478433 . - . ID=gene-PUW31_12240;Name=PUW31_12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12240 CP118128.1 Protein Homology CDS 2477624 2478433 . - 0 ID=cds-WJH07120.1;Parent=gene-PUW31_12240;Dbxref=NCBI_GP:WJH07120.1;Name=WJH07120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461324.1;locus_tag=PUW31_12240;product=sulfite exporter TauE/SafE family protein;protein_id=WJH07120.1;transl_table=11 CP118128.1 Genbank pseudogene 2478433 2479256 . - . ID=gene-PUW31_12245;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=pseudogene;locus_tag=PUW31_12245;pseudo=true CP118128.1 Protein Homology CDS 2478433 2479256 . - 0 ID=cds-PUW31_12245;Parent=gene-PUW31_12245;Note=frameshifted;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461325.1;locus_tag=PUW31_12245;product=penicillin-insensitive murein endopeptidase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2479260 2480345 . - . ID=gene-PUW31_12250;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=PUW31_12250 CP118128.1 Protein Homology CDS 2479260 2480345 . - 0 ID=cds-WJH07121.1;Parent=gene-PUW31_12250;Dbxref=NCBI_GP:WJH07121.1;Name=WJH07121.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=PUW31_12250;product=chorismate synthase;protein_id=WJH07121.1;transl_table=11 CP118128.1 Genbank gene 2480381 2481313 . - . ID=gene-PUW31_12255;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=PUW31_12255 CP118128.1 Protein Homology CDS 2480381 2481313 . - 0 ID=cds-WJH07122.1;Parent=gene-PUW31_12255;Dbxref=NCBI_GP:WJH07122.1;Name=WJH07122.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=PUW31_12255;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WJH07122.1;transl_table=11 CP118128.1 Genbank gene 2481479 2482030 . + . ID=gene-PUW31_12260;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=PUW31_12260 CP118128.1 Protein Homology CDS 2481479 2482030 . + 0 ID=cds-WJH07123.1;Parent=gene-PUW31_12260;Dbxref=NCBI_GP:WJH07123.1;Name=WJH07123.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461328.1;locus_tag=PUW31_12260;product=endonuclease SmrB;protein_id=WJH07123.1;transl_table=11 CP118128.1 Genbank gene 2482130 2482615 . - . ID=gene-PUW31_12265;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=PUW31_12265 CP118128.1 Protein Homology CDS 2482130 2482615 . - 0 ID=cds-WJH07124.1;Parent=gene-PUW31_12265;Dbxref=NCBI_GP:WJH07124.1;Name=WJH07124.1;Ontology_term=GO:0000160,GO:0101006;gbkey=CDS;gene=sixA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461329.1;locus_tag=PUW31_12265;product=phosphohistidine phosphatase SixA;protein_id=WJH07124.1;transl_table=11 CP118128.1 Genbank pseudogene 2482824 2484969 . - . ID=gene-PUW31_12270;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=pseudogene;locus_tag=PUW31_12270;pseudo=true CP118128.1 Protein Homology CDS 2482824 2484969 . - 0 ID=cds-PUW31_12270;Parent=gene-PUW31_12270;Note=frameshifted;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461330.1;locus_tag=PUW31_12270;product=fatty acid oxidation complex subunit alpha FadJ;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2484969 2486280 . - . ID=gene-PUW31_12275;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=pseudogene;locus_tag=PUW31_12275;pseudo=true CP118128.1 Protein Homology CDS 2484969 2486280 . - 0 ID=cds-PUW31_12275;Parent=gene-PUW31_12275;Note=frameshifted;Ontology_term=GO:0009062,GO:0003988;gbkey=CDS;gene=fadI;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461331.2;locus_tag=PUW31_12275;product=acetyl-CoA C-acyltransferase FadI;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2486457 2486741 . - . ID=gene-PUW31_12280;Name=PUW31_12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12280 CP118128.1 Protein Homology CDS 2486457 2486741 . - 0 ID=cds-WJH07125.1;Parent=gene-PUW31_12280;Dbxref=NCBI_GP:WJH07125.1;Name=WJH07125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=PUW31_12280;product=YfcZ/YiiS family protein;protein_id=WJH07125.1;transl_table=11 CP118128.1 Genbank gene 2487112 2488419 . + . ID=gene-PUW31_12285;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=PUW31_12285 CP118128.1 Protein Homology CDS 2487112 2488419 . + 0 ID=cds-WJH07126.1;Parent=gene-PUW31_12285;Dbxref=NCBI_GP:WJH07126.1;Name=WJH07126.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=PUW31_12285;product=long-chain fatty acid transporter FadL;protein_id=WJH07126.1;transl_table=11 CP118128.1 Genbank gene 2488480 2489235 . - . ID=gene-PUW31_12290;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=PUW31_12290 CP118128.1 Protein Homology CDS 2488480 2489235 . - 0 ID=cds-WJH07127.1;Parent=gene-PUW31_12290;Dbxref=NCBI_GP:WJH07127.1;Name=WJH07127.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461334.1;locus_tag=PUW31_12290;product=phospholipid-binding lipoprotein MlaA;protein_id=WJH07127.1;transl_table=11 CP118128.1 Genbank gene 2489524 2490465 . + . ID=gene-PUW31_12295;Name=PUW31_12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12295 CP118128.1 Protein Homology CDS 2489524 2490465 . + 0 ID=cds-WJH07128.1;Parent=gene-PUW31_12295;Dbxref=NCBI_GP:WJH07128.1;Name=WJH07128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461335.1;locus_tag=PUW31_12295;product=formate/nitrite transporter family protein;protein_id=WJH07128.1;transl_table=11 CP118128.1 Genbank gene 2490541 2490615 . + . ID=gene-PUW31_12300;Name=PUW31_12300;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_12300 CP118128.1 tRNAscan-SE tRNA 2490541 2490615 . + . ID=rna-PUW31_12300;Parent=gene-PUW31_12300;anticodon=(pos:2490574..2490576);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_12300;product=tRNA-Arg CP118128.1 tRNAscan-SE exon 2490541 2490615 . + . ID=exon-PUW31_12300-1;Parent=rna-PUW31_12300;anticodon=(pos:2490574..2490576);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_12300;product=tRNA-Arg CP118128.1 Genbank pseudogene 2490763 2491387 . - . ID=gene-PUW31_12305;Name=PUW31_12305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_12305;pseudo=true CP118128.1 Protein Homology CDS 2490763 2491387 . - 0 ID=cds-PUW31_12305;Parent=gene-PUW31_12305;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005054087.1;locus_tag=PUW31_12305;product=transposase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2491708 2492097 . + . ID=gene-PUW31_12310;Name=PUW31_12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12310 CP118128.1 Protein Homology CDS 2491708 2492097 . + 0 ID=cds-WJH07129.1;Parent=gene-PUW31_12310;Dbxref=NCBI_GP:WJH07129.1;Name=WJH07129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001696807.1;locus_tag=PUW31_12310;product=GtrA family protein;protein_id=WJH07129.1;transl_table=11 CP118128.1 Genbank pseudogene 2492066 2492284 . + . ID=gene-PUW31_12315;Name=PUW31_12315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_12315;pseudo=true CP118128.1 Protein Homology CDS 2492066 2492284 . + 0 ID=cds-PUW31_12315;Parent=gene-PUW31_12315;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459551.1;locus_tag=PUW31_12315;product=glycosyltransferase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2492338 2494260 . + . ID=gene-PUW31_12320;Name=PUW31_12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12320 CP118128.1 Protein Homology CDS 2492338 2494260 . + 0 ID=cds-WJH07130.1;Parent=gene-PUW31_12320;Dbxref=NCBI_GP:WJH07130.1;Name=WJH07130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400614.1;locus_tag=PUW31_12320;product=acyltransferase family protein;protein_id=WJH07130.1;transl_table=11 CP118128.1 Genbank pseudogene 2494431 2494877 . - . ID=gene-PUW31_12325;Name=PUW31_12325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_12325;pseudo=true CP118128.1 Protein Homology CDS 2494431 2494877 . - 0 ID=cds-PUW31_12325;Parent=gene-PUW31_12325;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=PUW31_12325;product=transposase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2495250 2495576 . - . ID=gene-PUW31_12330;Name=PUW31_12330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_12330;pseudo=true CP118128.1 Protein Homology CDS 2495250 2495576 . - 0 ID=cds-PUW31_12330;Parent=gene-PUW31_12330;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020812.2;locus_tag=PUW31_12330;product=tail spike protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2495771 2496708 . - . ID=gene-PUW31_12335;Name=pgtE;gbkey=Gene;gene=pgtE;gene_biotype=pseudogene;locus_tag=PUW31_12335;pseudo=true CP118128.1 Protein Homology CDS 2495771 2496708 . - 0 ID=cds-PUW31_12335;Parent=gene-PUW31_12335;Note=frameshifted;gbkey=CDS;gene=pgtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461336.1;locus_tag=PUW31_12335;product=omptin family outer membrane protease PgtE;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2496976 2498223 . - . ID=gene-PUW31_12340;Name=pgtA;gbkey=Gene;gene=pgtA;gene_biotype=protein_coding;locus_tag=PUW31_12340 CP118128.1 Protein Homology CDS 2496976 2498223 . - 0 ID=cds-WJH10734.1;Parent=gene-PUW31_12340;Dbxref=NCBI_GP:WJH10734.1;Name=WJH10734.1;gbkey=CDS;gene=pgtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461337.1;locus_tag=PUW31_12340;product=two-component system response regulator PgtA;protein_id=WJH10734.1;transl_table=11 CP118128.1 Genbank gene 2498213 2500219 . - . ID=gene-PUW31_12345;Name=pgtB;gbkey=Gene;gene=pgtB;gene_biotype=protein_coding;locus_tag=PUW31_12345 CP118128.1 Protein Homology CDS 2498213 2500219 . - 0 ID=cds-WJH07131.1;Parent=gene-PUW31_12345;Dbxref=NCBI_GP:WJH07131.1;Name=WJH07131.1;gbkey=CDS;gene=pgtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461338.1;locus_tag=PUW31_12345;product=two-component system sensor histidine kinase PgtB;protein_id=WJH07131.1;transl_table=11 CP118128.1 Genbank gene 2500216 2501409 . - . ID=gene-PUW31_12350;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=protein_coding;locus_tag=PUW31_12350 CP118128.1 Protein Homology CDS 2500216 2501409 . - 0 ID=cds-WJH10735.1;Parent=gene-PUW31_12350;Dbxref=NCBI_GP:WJH10735.1;Name=WJH10735.1;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461339.1;locus_tag=PUW31_12350;product=phosphoglycerate transport regulator PgtC;protein_id=WJH10735.1;transl_table=11 CP118128.1 Genbank pseudogene 2501845 2503234 . + . ID=gene-PUW31_12355;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=pseudogene;locus_tag=PUW31_12355;pseudo=true CP118128.1 Protein Homology CDS 2501845 2503234 . + 0 ID=cds-PUW31_12355;Parent=gene-PUW31_12355;Note=frameshifted;gbkey=CDS;gene=pgtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461340.1;locus_tag=PUW31_12355;product=phosphoglycerate transporter PgtP;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2503508 2503750 . - . ID=gene-PUW31_12360;Name=PUW31_12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12360 CP118128.1 Protein Homology CDS 2503508 2503750 . - 0 ID=cds-WJH07132.1;Parent=gene-PUW31_12360;Dbxref=NCBI_GP:WJH07132.1;Name=WJH07132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461341.1;locus_tag=PUW31_12360;product=YfdY family protein;protein_id=WJH07132.1;transl_table=11 CP118128.1 Genbank gene 2504272 2505192 . + . ID=gene-PUW31_12365;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=PUW31_12365 CP118128.1 Protein Homology CDS 2504272 2505192 . + 0 ID=cds-WJH07133.1;Parent=gene-PUW31_12365;Dbxref=NCBI_GP:WJH07133.1;Name=WJH07133.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461342.1;locus_tag=PUW31_12365;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WJH07133.1;transl_table=11 CP118128.1 Genbank gene 2505595 2505666 . + . ID=gene-PUW31_12370;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=PUW31_12370 CP118128.1 Protein Homology CDS 2505595 2505666 . + 0 ID=cds-WJH10736.1;Parent=gene-PUW31_12370;Dbxref=NCBI_GP:WJH10736.1;Name=WJH10736.1;gbkey=CDS;gene=ypdK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=PUW31_12370;product=membrane protein YpdK;protein_id=WJH10736.1;transl_table=11 CP118128.1 Genbank gene 2505716 2506954 . - . ID=gene-PUW31_12375;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=PUW31_12375 CP118128.1 Protein Homology CDS 2505716 2506954 . - 0 ID=cds-WJH07134.1;Parent=gene-PUW31_12375;Dbxref=NCBI_GP:WJH07134.1;Name=WJH07134.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461343.1;locus_tag=PUW31_12375;product=alanine transaminase;protein_id=WJH07134.1;transl_table=11 CP118128.1 Genbank gene 2507677 2508642 . - . ID=gene-PUW31_12380;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=PUW31_12380 CP118128.1 Protein Homology CDS 2507677 2508642 . - 0 ID=cds-WJH07135.1;Parent=gene-PUW31_12380;Dbxref=NCBI_GP:WJH07135.1;Name=WJH07135.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461344.1;locus_tag=PUW31_12380;product=glucokinase;protein_id=WJH07135.1;transl_table=11 CP118128.1 Genbank gene 2508846 2510087 . + . ID=gene-PUW31_12385;Name=PUW31_12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12385 CP118128.1 Protein Homology CDS 2508846 2510087 . + 0 ID=cds-WJH07136.1;Parent=gene-PUW31_12385;Dbxref=NCBI_GP:WJH07136.1;Name=WJH07136.1;Ontology_term=GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461345.1;locus_tag=PUW31_12385;product=ion channel protein;protein_id=WJH07136.1;transl_table=11 CP118128.1 Genbank gene 2510107 2511759 . - . ID=gene-PUW31_12390;Name=PUW31_12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12390 CP118128.1 Protein Homology CDS 2510107 2511759 . - 0 ID=cds-WJH07137.1;Parent=gene-PUW31_12390;Dbxref=NCBI_GP:WJH07137.1;Name=WJH07137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461346.1;locus_tag=PUW31_12390;product=alpha-keto acid decarboxylase family protein;protein_id=WJH07137.1;transl_table=11 CP118128.1 Genbank gene 2511939 2512937 . + . ID=gene-PUW31_12395;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=PUW31_12395 CP118128.1 Protein Homology CDS 2511939 2512937 . + 0 ID=cds-WJH07138.1;Parent=gene-PUW31_12395;Dbxref=NCBI_GP:WJH07138.1;Name=WJH07138.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461347.1;locus_tag=PUW31_12395;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WJH07138.1;transl_table=11 CP118128.1 Genbank gene 2513051 2513377 . + . ID=gene-PUW31_12400;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=PUW31_12400 CP118128.1 Protein Homology CDS 2513051 2513377 . + 0 ID=cds-WJH07139.1;Parent=gene-PUW31_12400;Dbxref=NCBI_GP:WJH07139.1;Name=WJH07139.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461348.1;locus_tag=PUW31_12400;product=DUF2502 domain-containing protein YpeC;protein_id=WJH07139.1;transl_table=11 CP118128.1 Genbank gene 2513438 2514679 . - . ID=gene-PUW31_12405;Name=PUW31_12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12405 CP118128.1 Protein Homology CDS 2513438 2514679 . - 0 ID=cds-WJH07140.1;Parent=gene-PUW31_12405;Dbxref=NCBI_GP:WJH07140.1;Name=WJH07140.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461349.1;locus_tag=PUW31_12405;product=Nramp family divalent metal transporter;protein_id=WJH07140.1;transl_table=11 CP118128.1 Genbank gene 2515022 2516224 . + . ID=gene-PUW31_12410;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=PUW31_12410 CP118128.1 Protein Homology CDS 2515022 2516224 . + 0 ID=cds-WJH07141.1;Parent=gene-PUW31_12410;Dbxref=NCBI_GP:WJH07141.1;Name=WJH07141.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461350.1;locus_tag=PUW31_12410;product=nucleoside permease NupC;protein_id=WJH07141.1;transl_table=11 CP118128.1 Genbank pseudogene 2516277 2518465 . - . ID=gene-PUW31_12415;Name=PUW31_12415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_12415;pseudo=true CP118128.1 Protein Homology CDS 2516277 2518465 . - 0 ID=cds-PUW31_12415;Parent=gene-PUW31_12415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461351.1;locus_tag=PUW31_12415;product=sensor domain-containing phosphodiesterase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2518656 2518731 . - . ID=gene-PUW31_12420;Name=PUW31_12420;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_12420 CP118128.1 tRNAscan-SE tRNA 2518656 2518731 . - . ID=rna-PUW31_12420;Parent=gene-PUW31_12420;anticodon=(pos:complement(2518696..2518698));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_12420;product=tRNA-Ala CP118128.1 tRNAscan-SE exon 2518656 2518731 . - . ID=exon-PUW31_12420-1;Parent=rna-PUW31_12420;anticodon=(pos:complement(2518696..2518698));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_12420;product=tRNA-Ala CP118128.1 Genbank gene 2518953 2519315 . + . ID=gene-PUW31_12425;Name=PUW31_12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12425 CP118128.1 Protein Homology CDS 2518953 2519315 . + 0 ID=cds-WJH07142.1;Parent=gene-PUW31_12425;Dbxref=NCBI_GP:WJH07142.1;Name=WJH07142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461352.1;locus_tag=PUW31_12425;product=putative DNA-binding transcriptional regulator;protein_id=WJH07142.1;transl_table=11 CP118128.1 Genbank gene 2519317 2519709 . + . ID=gene-PUW31_12430;Name=PUW31_12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12430 CP118128.1 Protein Homology CDS 2519317 2519709 . + 0 ID=cds-WJH07143.1;Parent=gene-PUW31_12430;Dbxref=NCBI_GP:WJH07143.1;Name=WJH07143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461353.1;locus_tag=PUW31_12430;product=putative DNA-binding transcriptional regulator;protein_id=WJH07143.1;transl_table=11 CP118128.1 Genbank gene 2519763 2521178 . - . ID=gene-PUW31_12435;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=PUW31_12435 CP118128.1 Protein Homology CDS 2519763 2521178 . - 0 ID=cds-WJH07144.1;Parent=gene-PUW31_12435;Dbxref=NCBI_GP:WJH07144.1;Name=WJH07144.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461354.1;locus_tag=PUW31_12435;product=glutamate--tRNA ligase;protein_id=WJH07144.1;transl_table=11 CP118128.1 Genbank gene 2521437 2521512 . + . ID=gene-PUW31_12440;Name=PUW31_12440;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_12440 CP118128.1 tRNAscan-SE tRNA 2521437 2521512 . + . ID=rna-PUW31_12440;Parent=gene-PUW31_12440;anticodon=(pos:2521470..2521472);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_12440;product=tRNA-Val CP118128.1 tRNAscan-SE exon 2521437 2521512 . + . ID=exon-PUW31_12440-1;Parent=rna-PUW31_12440;anticodon=(pos:2521470..2521472);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_12440;product=tRNA-Val CP118128.1 Genbank gene 2521558 2521633 . + . ID=gene-PUW31_12445;Name=PUW31_12445;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_12445 CP118128.1 tRNAscan-SE tRNA 2521558 2521633 . + . ID=rna-PUW31_12445;Parent=gene-PUW31_12445;anticodon=(pos:2521591..2521593);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_12445;product=tRNA-Val CP118128.1 tRNAscan-SE exon 2521558 2521633 . + . ID=exon-PUW31_12445-1;Parent=rna-PUW31_12445;anticodon=(pos:2521591..2521593);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_12445;product=tRNA-Val CP118128.1 Genbank gene 2521638 2521713 . + . ID=gene-PUW31_12450;Name=PUW31_12450;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_12450 CP118128.1 tRNAscan-SE tRNA 2521638 2521713 . + . ID=rna-PUW31_12450;Parent=gene-PUW31_12450;anticodon=(pos:2521671..2521673);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_12450;product=tRNA-Lys CP118128.1 tRNAscan-SE exon 2521638 2521713 . + . ID=exon-PUW31_12450-1;Parent=rna-PUW31_12450;anticodon=(pos:2521671..2521673);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_12450;product=tRNA-Lys CP118128.1 Genbank gene 2521877 2522761 . - . ID=gene-PUW31_12455;Name=PUW31_12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12455 CP118128.1 Protein Homology CDS 2521877 2522761 . - 0 ID=cds-WJH10737.1;Parent=gene-PUW31_12455;Dbxref=NCBI_GP:WJH10737.1;Name=WJH10737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461355.1;locus_tag=PUW31_12455;product=LysR family transcriptional regulator;protein_id=WJH10737.1;transl_table=11 CP118128.1 Genbank gene 2522813 2522971 . - . ID=gene-PUW31_12460;Name=PUW31_12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12460 CP118128.1 Protein Homology CDS 2522813 2522971 . - 0 ID=cds-WJH07145.1;Parent=gene-PUW31_12460;Dbxref=NCBI_GP:WJH07145.1;Name=WJH07145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658729.1;locus_tag=PUW31_12460;product=DUF1427 family protein;protein_id=WJH07145.1;transl_table=11 CP118128.1 Genbank gene 2523030 2524286 . - . ID=gene-PUW31_12465;Name=PUW31_12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12465 CP118128.1 Protein Homology CDS 2523030 2524286 . - 0 ID=cds-WJH07146.1;Parent=gene-PUW31_12465;Dbxref=NCBI_GP:WJH07146.1;Name=WJH07146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461356.1;locus_tag=PUW31_12465;product=nucleoside permease;protein_id=WJH07146.1;transl_table=11 CP118128.1 Genbank gene 2524341 2525174 . - . ID=gene-PUW31_12470;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=PUW31_12470 CP118128.1 Protein Homology CDS 2524341 2525174 . - 0 ID=cds-WJH07147.1;Parent=gene-PUW31_12470;Dbxref=NCBI_GP:WJH07147.1;Name=WJH07147.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=xapA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448816.1;locus_tag=PUW31_12470;product=xanthosine phosphorylase;protein_id=WJH07147.1;transl_table=11 CP118128.1 Genbank gene 2525430 2526191 . + . ID=gene-PUW31_12475;Name=PUW31_12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12475 CP118128.1 Protein Homology CDS 2525430 2526191 . + 0 ID=cds-WJH07148.1;Parent=gene-PUW31_12475;Dbxref=NCBI_GP:WJH07148.1;Name=WJH07148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461358.1;locus_tag=PUW31_12475;product=outer membrane protein;protein_id=WJH07148.1;transl_table=11 CP118128.1 Genbank gene 2526253 2527179 . - . ID=gene-PUW31_12480;Name=PUW31_12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12480 CP118128.1 Protein Homology CDS 2526253 2527179 . - 0 ID=cds-WJH07149.1;Parent=gene-PUW31_12480;Dbxref=NCBI_GP:WJH07149.1;Name=WJH07149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461359.1;locus_tag=PUW31_12480;product=LysR family transcriptional regulator;protein_id=WJH07149.1;transl_table=11 CP118128.1 Genbank gene 2527269 2528267 . + . ID=gene-PUW31_12485;Name=PUW31_12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12485 CP118128.1 Protein Homology CDS 2527269 2528267 . + 0 ID=cds-WJH07150.1;Parent=gene-PUW31_12485;Dbxref=NCBI_GP:WJH07150.1;Name=WJH07150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461360.2;locus_tag=PUW31_12485;product=bile acid:sodium symporter;protein_id=WJH07150.1;transl_table=11 CP118128.1 Genbank gene 2528264 2528482 . - . ID=gene-PUW31_12490;Name=PUW31_12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12490 CP118128.1 Protein Homology CDS 2528264 2528482 . - 0 ID=cds-WJH07151.1;Parent=gene-PUW31_12490;Dbxref=NCBI_GP:WJH07151.1;Name=WJH07151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=PUW31_12490;product=DUF3820 family protein;protein_id=WJH07151.1;transl_table=11 CP118128.1 Genbank gene 2528484 2530499 . - . ID=gene-PUW31_12495;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=PUW31_12495 CP118128.1 Protein Homology CDS 2528484 2530499 . - 0 ID=cds-WJH07152.1;Parent=gene-PUW31_12495;Dbxref=NCBI_GP:WJH07152.1;Name=WJH07152.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461362.1;locus_tag=PUW31_12495;product=NAD-dependent DNA ligase LigA;protein_id=WJH07152.1;transl_table=11 CP118128.1 Genbank gene 2530571 2531557 . - . ID=gene-PUW31_12500;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=PUW31_12500 CP118128.1 Protein Homology CDS 2530571 2531557 . - 0 ID=cds-WJH07153.1;Parent=gene-PUW31_12500;Dbxref=NCBI_GP:WJH07153.1;Name=WJH07153.1;Ontology_term=GO:0000917,GO:0005515;gbkey=CDS;gene=zipA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461363.1;locus_tag=PUW31_12500;product=cell division protein ZipA;protein_id=WJH07153.1;transl_table=11 CP118128.1 Genbank gene 2531789 2532550 . + . ID=gene-PUW31_12505;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=PUW31_12505 CP118128.1 Protein Homology CDS 2531789 2532550 . + 0 ID=cds-WJH07154.1;Parent=gene-PUW31_12505;Dbxref=NCBI_GP:WJH07154.1;Name=WJH07154.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461364.1;locus_tag=PUW31_12505;product=sulfate transporter CysZ;protein_id=WJH07154.1;transl_table=11 CP118128.1 Genbank gene 2532714 2533685 . + . ID=gene-PUW31_12510;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=PUW31_12510 CP118128.1 Protein Homology CDS 2532714 2533685 . + 0 ID=cds-WJH07155.1;Parent=gene-PUW31_12510;Dbxref=NCBI_GP:WJH07155.1;Name=WJH07155.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=PUW31_12510;product=cysteine synthase A;protein_id=WJH07155.1;transl_table=11 CP118128.1 Genbank gene 2534069 2534326 . + . ID=gene-PUW31_12515;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=PUW31_12515 CP118128.1 Protein Homology CDS 2534069 2534326 . + 0 ID=cds-WJH07156.1;Parent=gene-PUW31_12515;Dbxref=NCBI_GP:WJH07156.1;Name=WJH07156.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=PUW31_12515;product=phosphocarrier protein Hpr;protein_id=WJH07156.1;transl_table=11 CP118128.1 Genbank gene 2534375 2536102 . + . ID=gene-PUW31_12520;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=PUW31_12520 CP118128.1 Protein Homology CDS 2534375 2536102 . + 0 ID=cds-WJH07157.1;Parent=gene-PUW31_12520;Dbxref=NCBI_GP:WJH07157.1;Name=WJH07157.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461367.1;locus_tag=PUW31_12520;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WJH07157.1;transl_table=11 CP118128.1 Genbank gene 2536143 2536652 . + . ID=gene-PUW31_12525;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=PUW31_12525 CP118128.1 Protein Homology CDS 2536143 2536652 . + 0 ID=cds-WJH07158.1;Parent=gene-PUW31_12525;Dbxref=NCBI_GP:WJH07158.1;Name=WJH07158.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=PUW31_12525;product=PTS glucose transporter subunit IIA;protein_id=WJH07158.1;transl_table=11 CP118128.1 Genbank gene 2536816 2537055 . - . ID=gene-PUW31_12530;Name=PUW31_12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12530 CP118128.1 Protein Homology CDS 2536816 2537055 . - 0 ID=cds-WJH07159.1;Parent=gene-PUW31_12530;Dbxref=NCBI_GP:WJH07159.1;Name=WJH07159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461369.1;locus_tag=PUW31_12530;product=cytoplasmic protein;protein_id=WJH07159.1;transl_table=11 CP118128.1 Genbank gene 2537052 2537918 . - . ID=gene-PUW31_12535;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=PUW31_12535 CP118128.1 Protein Homology CDS 2537052 2537918 . - 0 ID=cds-WJH07160.1;Parent=gene-PUW31_12535;Dbxref=NCBI_GP:WJH07160.1;Name=WJH07160.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461370.1;locus_tag=PUW31_12535;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WJH07160.1;transl_table=11 CP118128.1 Genbank gene 2538001 2539293 . + . ID=gene-PUW31_12540;Name=ptsJ;gbkey=Gene;gene=ptsJ;gene_biotype=protein_coding;locus_tag=PUW31_12540 CP118128.1 Protein Homology CDS 2538001 2539293 . + 0 ID=cds-WJH07161.1;Parent=gene-PUW31_12540;Dbxref=NCBI_GP:WJH07161.1;Name=WJH07161.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptsJ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461371.1;locus_tag=PUW31_12540;product=transcriptional regulator PtsJ;protein_id=WJH07161.1;transl_table=11 CP118128.1 Genbank gene 2539308 2540027 . + . ID=gene-PUW31_12545;Name=PUW31_12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12545 CP118128.1 Protein Homology CDS 2539308 2540027 . + 0 ID=cds-WJH07162.1;Parent=gene-PUW31_12545;Dbxref=NCBI_GP:WJH07162.1;Name=WJH07162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461372.1;locus_tag=PUW31_12545;product=GMP synthase;protein_id=WJH07162.1;transl_table=11 CP118128.1 Genbank gene 2540086 2540469 . + . ID=gene-PUW31_12550;Name=PUW31_12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12550 CP118128.1 Protein Homology CDS 2540086 2540469 . + 0 ID=cds-WJH07163.1;Parent=gene-PUW31_12550;Dbxref=NCBI_GP:WJH07163.1;Name=WJH07163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000710732.1;locus_tag=PUW31_12550;product=YfeK family protein;protein_id=WJH07163.1;transl_table=11 CP118128.1 Genbank gene 2540569 2541177 . - . ID=gene-PUW31_12555;Name=PUW31_12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12555 CP118128.1 Protein Homology CDS 2540569 2541177 . - 0 ID=cds-WJH07164.1;Parent=gene-PUW31_12555;Dbxref=NCBI_GP:WJH07164.1;Name=WJH07164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000666526.1;locus_tag=PUW31_12555;product=tetratricopeptide repeat protein;protein_id=WJH07164.1;transl_table=11 CP118128.1 Genbank gene 2541429 2542340 . - . ID=gene-PUW31_12560;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=PUW31_12560 CP118128.1 Protein Homology CDS 2541429 2542340 . - 0 ID=cds-WJH07165.1;Parent=gene-PUW31_12560;Dbxref=NCBI_GP:WJH07165.1;Name=WJH07165.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461375.1;locus_tag=PUW31_12560;product=cysteine synthase CysM;protein_id=WJH07165.1;transl_table=11 CP118128.1 Genbank gene 2542408 2543505 . - . ID=gene-PUW31_12565;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=PUW31_12565 CP118128.1 Protein Homology CDS 2542408 2543505 . - 0 ID=cds-WJH07166.1;Parent=gene-PUW31_12565;Dbxref=NCBI_GP:WJH07166.1;Name=WJH07166.1;Ontology_term=GO:0008272,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461376.1;locus_tag=PUW31_12565;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WJH07166.1;transl_table=11 CP118128.1 Genbank gene 2543495 2544370 . - . ID=gene-PUW31_12570;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=PUW31_12570 CP118128.1 Protein Homology CDS 2543495 2544370 . - 0 ID=cds-WJH07167.1;Parent=gene-PUW31_12570;Dbxref=NCBI_GP:WJH07167.1;Name=WJH07167.1;Ontology_term=GO:0008272,GO:0055085,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461377.1;locus_tag=PUW31_12570;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WJH07167.1;transl_table=11 CP118128.1 Genbank gene 2544370 2545203 . - . ID=gene-PUW31_12575;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=PUW31_12575 CP118128.1 Protein Homology CDS 2544370 2545203 . - 0 ID=cds-WJH07168.1;Parent=gene-PUW31_12575;Dbxref=NCBI_GP:WJH07168.1;Name=WJH07168.1;Ontology_term=GO:0008272,GO:0055085,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=PUW31_12575;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WJH07168.1;transl_table=11 CP118128.1 Genbank gene 2545203 2546219 . - . ID=gene-PUW31_12580;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=PUW31_12580 CP118128.1 Protein Homology CDS 2545203 2546219 . - 0 ID=cds-WJH07169.1;Parent=gene-PUW31_12580;Dbxref=NCBI_GP:WJH07169.1;Name=WJH07169.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461379.1;locus_tag=PUW31_12580;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WJH07169.1;transl_table=11 CP118128.1 Genbank gene 2546377 2547174 . - . ID=gene-PUW31_12585;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=PUW31_12585 CP118128.1 Protein Homology CDS 2546377 2547174 . - 0 ID=cds-WJH07170.1;Parent=gene-PUW31_12585;Dbxref=NCBI_GP:WJH07170.1;Name=WJH07170.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517461.1;locus_tag=PUW31_12585;product=SDR family oxidoreductase UcpA;protein_id=WJH07170.1;transl_table=11 CP118128.1 Genbank gene 2547411 2548310 . - . ID=gene-PUW31_12590;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=PUW31_12590 CP118128.1 Protein Homology CDS 2547411 2548310 . - 0 ID=cds-WJH07171.1;Parent=gene-PUW31_12590;Dbxref=NCBI_GP:WJH07171.1;Name=WJH07171.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461381.1;locus_tag=PUW31_12590;product=porphyrinogen peroxidase;protein_id=WJH07171.1;transl_table=11 CP118128.1 Genbank pseudogene 2548405 2548979 . - . ID=gene-PUW31_12595;Name=PUW31_12595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_12595;pseudo=true CP118128.1 Protein Homology CDS 2548405 2548979 . - 0 ID=cds-PUW31_12595;Parent=gene-PUW31_12595;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461382.1;locus_tag=PUW31_12595;product=RpoE-regulated lipoprotein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2549041 2549489 . - . ID=gene-PUW31_12600;Name=PUW31_12600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_12600;pseudo=true CP118128.1 Protein Homology CDS 2549041 2549489 . - 0 ID=cds-PUW31_12600;Parent=gene-PUW31_12600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461383.1;locus_tag=PUW31_12600;product=DUF2919 domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2549476 2549901 . - . ID=gene-PUW31_12605;Name=PUW31_12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12605 CP118128.1 Protein Homology CDS 2549476 2549901 . - 0 ID=cds-WJH07172.1;Parent=gene-PUW31_12605;Dbxref=NCBI_GP:WJH07172.1;Name=WJH07172.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311332.2;locus_tag=PUW31_12605;product=GNAT family acetyltransferase;protein_id=WJH07172.1;transl_table=11 CP118128.1 Genbank gene 2550114 2550983 . + . ID=gene-PUW31_12610;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=PUW31_12610 CP118128.1 Protein Homology CDS 2550114 2550983 . + 0 ID=cds-WJH07173.1;Parent=gene-PUW31_12610;Dbxref=NCBI_GP:WJH07173.1;Name=WJH07173.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461385.1;locus_tag=PUW31_12610;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WJH07173.1;transl_table=11 CP118128.1 Genbank gene 2550986 2551885 . + . ID=gene-PUW31_12615;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=PUW31_12615 CP118128.1 Protein Homology CDS 2550986 2551885 . + 0 ID=cds-WJH07174.1;Parent=gene-PUW31_12615;Dbxref=NCBI_GP:WJH07174.1;Name=WJH07174.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461386.1;locus_tag=PUW31_12615;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WJH07174.1;transl_table=11 CP118128.1 Genbank gene 2551906 2552235 . + . ID=gene-PUW31_12620;Name=PUW31_12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12620 CP118128.1 Protein Homology CDS 2551906 2552235 . + 0 ID=cds-WJH07175.1;Parent=gene-PUW31_12620;Dbxref=NCBI_GP:WJH07175.1;Name=WJH07175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461387.1;locus_tag=PUW31_12620;product=hypothetical protein;protein_id=WJH07175.1;transl_table=11 CP118128.1 Genbank pseudogene 2552290 2552517 . + . ID=gene-PUW31_12625;Name=PUW31_12625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_12625;pseudo=true CP118128.1 Protein Homology CDS 2552290 2552517 . + 0 ID=cds-PUW31_12625;Parent=gene-PUW31_12625;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461388.1;locus_tag=PUW31_12625;product=DUF1963 domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2552684 2553736 . - . ID=gene-PUW31_12630;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=PUW31_12630 CP118128.1 Protein Homology CDS 2552684 2553736 . - 0 ID=cds-WJH07176.1;Parent=gene-PUW31_12630;Dbxref=NCBI_GP:WJH07176.1;Name=WJH07176.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461389.1;locus_tag=PUW31_12630;product=HTH-type transcriptional regulator EutR;protein_id=WJH07176.1;transl_table=11 CP118128.1 Genbank gene 2553784 2554278 . - . ID=gene-PUW31_12635;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=PUW31_12635 CP118128.1 Protein Homology CDS 2553784 2554278 . - 0 ID=cds-WJH07177.1;Parent=gene-PUW31_12635;Dbxref=NCBI_GP:WJH07177.1;Name=WJH07177.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461390.1;locus_tag=PUW31_12635;product=ethanolamine utilization microcompartment protein EutK;protein_id=WJH07177.1;transl_table=11 CP118128.1 Genbank gene 2554291 2554950 . - . ID=gene-PUW31_12640;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=PUW31_12640 CP118128.1 Protein Homology CDS 2554291 2554950 . - 0 ID=cds-WJH07178.1;Parent=gene-PUW31_12640;Dbxref=NCBI_GP:WJH07178.1;Name=WJH07178.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461391.1;locus_tag=PUW31_12640;product=ethanolamine utilization microcompartment protein EutL;protein_id=WJH07178.1;transl_table=11 CP118128.1 Genbank gene 2554960 2555856 . - . ID=gene-PUW31_12645;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=PUW31_12645 CP118128.1 Protein Homology CDS 2554960 2555856 . - 0 ID=cds-WJH07179.1;Parent=gene-PUW31_12645;Dbxref=NCBI_GP:WJH07179.1;Name=WJH07179.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461392.1;locus_tag=PUW31_12645;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WJH07179.1;transl_table=11 CP118128.1 Genbank gene 2555875 2557236 . - . ID=gene-PUW31_12650;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=PUW31_12650 CP118128.1 Protein Homology CDS 2555875 2557236 . - 0 ID=cds-WJH07180.1;Parent=gene-PUW31_12650;Dbxref=NCBI_GP:WJH07180.1;Name=WJH07180.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461393.1;locus_tag=PUW31_12650;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WJH07180.1;transl_table=11 CP118128.1 Genbank gene 2557248 2558651 . - . ID=gene-PUW31_12655;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=PUW31_12655 CP118128.1 Protein Homology CDS 2557248 2558651 . - 0 ID=cds-WJH07181.1;Parent=gene-PUW31_12655;Dbxref=NCBI_GP:WJH07181.1;Name=WJH07181.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461394.1;locus_tag=PUW31_12655;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WJH07181.1;transl_table=11 CP118128.1 Genbank gene 2558648 2559874 . - . ID=gene-PUW31_12660;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=PUW31_12660 CP118128.1 Protein Homology CDS 2558648 2559874 . - 0 ID=cds-WJH07182.1;Parent=gene-PUW31_12660;Dbxref=NCBI_GP:WJH07182.1;Name=WJH07182.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461395.1;locus_tag=PUW31_12660;product=ethanolamine utilization protein EutH;protein_id=WJH07182.1;transl_table=11 CP118128.1 Genbank gene 2559994 2561181 . - . ID=gene-PUW31_12665;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=PUW31_12665 CP118128.1 Protein Homology CDS 2559994 2561181 . - 0 ID=cds-WJH07183.1;Parent=gene-PUW31_12665;Dbxref=NCBI_GP:WJH07183.1;Name=WJH07183.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461396.1;locus_tag=PUW31_12665;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WJH07183.1;transl_table=11 CP118128.1 Genbank gene 2561171 2562010 . - . ID=gene-PUW31_12670;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=PUW31_12670 CP118128.1 Protein Homology CDS 2561171 2562010 . - 0 ID=cds-WJH07184.1;Parent=gene-PUW31_12670;Dbxref=NCBI_GP:WJH07184.1;Name=WJH07184.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461397.1;locus_tag=PUW31_12670;product=ethanolamine utilization protein EutJ;protein_id=WJH07184.1;transl_table=11 CP118128.1 Genbank gene 2562021 2563424 . - . ID=gene-PUW31_12675;Name=PUW31_12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12675 CP118128.1 Protein Homology CDS 2562021 2563424 . - 0 ID=cds-WJH07185.1;Parent=gene-PUW31_12675;Dbxref=NCBI_GP:WJH07185.1;Name=WJH07185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461398.1;locus_tag=PUW31_12675;product=aldehyde dehydrogenase EutE;protein_id=WJH07185.1;transl_table=11 CP118128.1 Genbank gene 2563436 2563723 . - . ID=gene-PUW31_12680;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=PUW31_12680 CP118128.1 Protein Homology CDS 2563436 2563723 . - 0 ID=cds-WJH07186.1;Parent=gene-PUW31_12680;Dbxref=NCBI_GP:WJH07186.1;Name=WJH07186.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=PUW31_12680;product=ethanolamine utilization microcompartment protein EutN;protein_id=WJH07186.1;transl_table=11 CP118128.1 Genbank gene 2563836 2564126 . - . ID=gene-PUW31_12685;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=PUW31_12685 CP118128.1 Protein Homology CDS 2563836 2564126 . - 0 ID=cds-WJH07187.1;Parent=gene-PUW31_12685;Dbxref=NCBI_GP:WJH07187.1;Name=WJH07187.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461400.1;locus_tag=PUW31_12685;product=ethanolamine utilization microcompartment protein EutM;protein_id=WJH07187.1;transl_table=11 CP118128.1 Genbank gene 2564167 2565183 . - . ID=gene-PUW31_12690;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=PUW31_12690 CP118128.1 Protein Homology CDS 2564167 2565183 . - 0 ID=cds-WJH07188.1;Parent=gene-PUW31_12690;Dbxref=NCBI_GP:WJH07188.1;Name=WJH07188.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461401.1;locus_tag=PUW31_12690;product=phosphate acetyltransferase;protein_id=WJH07188.1;transl_table=11 CP118128.1 Genbank gene 2565180 2565983 . - . ID=gene-PUW31_12695;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=PUW31_12695 CP118128.1 Protein Homology CDS 2565180 2565983 . - 0 ID=cds-WJH07189.1;Parent=gene-PUW31_12695;Dbxref=NCBI_GP:WJH07189.1;Name=WJH07189.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461402.1;locus_tag=PUW31_12695;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WJH07189.1;transl_table=11 CP118128.1 Genbank gene 2565980 2566669 . - . ID=gene-PUW31_12700;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=PUW31_12700 CP118128.1 Protein Homology CDS 2565980 2566669 . - 0 ID=cds-WJH07190.1;Parent=gene-PUW31_12700;Dbxref=NCBI_GP:WJH07190.1;Name=WJH07190.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461403.1;locus_tag=PUW31_12700;product=ethanolamine utilization acetate kinase EutQ;protein_id=WJH07190.1;transl_table=11 CP118128.1 Genbank gene 2566647 2567126 . - . ID=gene-PUW31_12705;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=PUW31_12705 CP118128.1 Protein Homology CDS 2566647 2567126 . - 0 ID=cds-WJH07191.1;Parent=gene-PUW31_12705;Dbxref=NCBI_GP:WJH07191.1;Name=WJH07191.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461404.1;locus_tag=PUW31_12705;product=ethanolamine utilization acetate kinase EutP;protein_id=WJH07191.1;transl_table=11 CP118128.1 Genbank gene 2567139 2567474 . - . ID=gene-PUW31_12710;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=PUW31_12710 CP118128.1 Protein Homology CDS 2567139 2567474 . - 0 ID=cds-WJH07192.1;Parent=gene-PUW31_12710;Dbxref=NCBI_GP:WJH07192.1;Name=WJH07192.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461405.1;locus_tag=PUW31_12710;product=ethanolamine utilization microcompartment protein EutS;protein_id=WJH07192.1;transl_table=11 CP118128.1 Genbank pseudogene 2567891 2570168 . - . ID=gene-PUW31_12715;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=pseudogene;locus_tag=PUW31_12715;pseudo=true CP118128.1 Protein Homology CDS 2567891 2570168 . - 0 ID=cds-PUW31_12715;Parent=gene-PUW31_12715;Note=frameshifted;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461407.1;locus_tag=PUW31_12715;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2570440 2571390 . + . ID=gene-PUW31_12720;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=PUW31_12720 CP118128.1 Protein Homology CDS 2570440 2571390 . + 0 ID=cds-WJH07193.1;Parent=gene-PUW31_12720;Dbxref=NCBI_GP:WJH07193.1;Name=WJH07193.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;gene=tal;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461408.1;locus_tag=PUW31_12720;product=transaldolase;protein_id=WJH07193.1;transl_table=11 CP118128.1 Genbank pseudogene 2571410 2573409 . + . ID=gene-PUW31_12725;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=pseudogene;locus_tag=PUW31_12725;pseudo=true CP118128.1 Protein Homology CDS 2571410 2573409 . + 0 ID=cds-PUW31_12725;Parent=gene-PUW31_12725;Note=frameshifted;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461409.1;locus_tag=PUW31_12725;product=transketolase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2573472 2573702 . - . ID=gene-PUW31_12730;Name=PUW31_12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12730 CP118128.1 Protein Homology CDS 2573472 2573702 . - 0 ID=cds-WJH10738.1;Parent=gene-PUW31_12730;Dbxref=NCBI_GP:WJH10738.1;Name=WJH10738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461410.1;locus_tag=PUW31_12730;product=hypothetical protein;protein_id=WJH10738.1;transl_table=11 CP118128.1 Genbank gene 2573830 2574873 . - . ID=gene-PUW31_12735;Name=PUW31_12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12735 CP118128.1 Protein Homology CDS 2573830 2574873 . - 0 ID=cds-WJH07194.1;Parent=gene-PUW31_12735;Dbxref=NCBI_GP:WJH07194.1;Name=WJH07194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461411.1;locus_tag=PUW31_12735;product=DUF1176 domain-containing protein;protein_id=WJH07194.1;transl_table=11 CP118128.1 Genbank gene 2574998 2575573 . - . ID=gene-PUW31_12740;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=PUW31_12740 CP118128.1 Protein Homology CDS 2574998 2575573 . - 0 ID=cds-WJH07195.1;Parent=gene-PUW31_12740;Dbxref=NCBI_GP:WJH07195.1;Name=WJH07195.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461412.1;locus_tag=PUW31_12740;product=GDP-mannose pyrophosphatase NudK;protein_id=WJH07195.1;transl_table=11 CP118128.1 Genbank gene 2575777 2577075 . + . ID=gene-PUW31_12745;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=PUW31_12745 CP118128.1 Protein Homology CDS 2575777 2577075 . + 0 ID=cds-WJH07196.1;Parent=gene-PUW31_12745;Dbxref=NCBI_GP:WJH07196.1;Name=WJH07196.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461413.1;locus_tag=PUW31_12745;product=penicillin binding protein PBP4B;protein_id=WJH07196.1;transl_table=11 CP118128.1 Genbank pseudogene 2577524 2579483 . - . ID=gene-PUW31_12750;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=pseudogene;locus_tag=PUW31_12750;pseudo=true CP118128.1 Protein Homology CDS 2577524 2579483 . - 0 ID=cds-PUW31_12750;Parent=gene-PUW31_12750;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461414.1;locus_tag=PUW31_12750;product=formate-dependent uric acid utilization protein AegA;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2579669 2581369 . + . ID=gene-PUW31_12755;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=PUW31_12755 CP118128.1 Protein Homology CDS 2579669 2581369 . + 0 ID=cds-WJH07197.1;Parent=gene-PUW31_12755;Dbxref=NCBI_GP:WJH07197.1;Name=WJH07197.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461415.1;locus_tag=PUW31_12755;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WJH07197.1;transl_table=11 CP118128.1 Genbank pseudogene 2581554 2584666 . + . ID=gene-PUW31_12760;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=pseudogene;locus_tag=PUW31_12760;pseudo=true CP118128.1 Protein Homology CDS 2581554 2584666 . + 0 ID=cds-PUW31_12760;Parent=gene-PUW31_12760;Note=frameshifted%3B internal stop;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461416.1;locus_tag=PUW31_12760;product=multidrug efflux RND transporter permease AcrD;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2584768 2584827 . - . ID=gene-PUW31_12765;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=PUW31_12765 CP118128.1 Protein Homology CDS 2584768 2584827 . - 0 ID=cds-WJH10739.1;Parent=gene-PUW31_12765;Dbxref=NCBI_GP:WJH10739.1;Name=WJH10739.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=PUW31_12765;product=protein YpfM;protein_id=WJH10739.1;transl_table=11 CP118128.1 Genbank gene 2585240 2585596 . + . ID=gene-PUW31_12770;Name=PUW31_12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12770 CP118128.1 Protein Homology CDS 2585240 2585596 . + 0 ID=cds-WJH07198.1;Parent=gene-PUW31_12770;Dbxref=NCBI_GP:WJH07198.1;Name=WJH07198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461417.1;locus_tag=PUW31_12770;product=ArsC family reductase;protein_id=WJH07198.1;transl_table=11 CP118128.1 Genbank gene 2585600 2586727 . + . ID=gene-PUW31_12775;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=PUW31_12775 CP118128.1 Protein Homology CDS 2585600 2586727 . + 0 ID=cds-WJH07199.1;Parent=gene-PUW31_12775;Dbxref=NCBI_GP:WJH07199.1;Name=WJH07199.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=PUW31_12775;product=succinyl-diaminopimelate desuccinylase;protein_id=WJH07199.1;transl_table=11 CP118128.1 Genbank gene 2586755 2586955 . + . ID=gene-PUW31_12780;Name=PUW31_12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12780 CP118128.1 Protein Homology CDS 2586755 2586955 . + 0 ID=cds-WJH07200.1;Parent=gene-PUW31_12780;Dbxref=NCBI_GP:WJH07200.1;Name=WJH07200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461419.1;locus_tag=PUW31_12780;product=YpfN family protein;protein_id=WJH07200.1;transl_table=11 CP118128.1 Genbank gene 2586982 2589000 . - . ID=gene-PUW31_12785;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=PUW31_12785 CP118128.1 Protein Homology CDS 2586982 2589000 . - 0 ID=cds-WJH07201.1;Parent=gene-PUW31_12785;Dbxref=NCBI_GP:WJH07201.1;Name=WJH07201.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461420.1;locus_tag=PUW31_12785;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=WJH07201.1;transl_table=11 CP118128.1 Genbank gene 2589016 2589879 . - . ID=gene-PUW31_12790;Name=PUW31_12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12790 CP118128.1 Protein Homology CDS 2589016 2589879 . - 0 ID=cds-WJH07202.1;Parent=gene-PUW31_12790;Dbxref=NCBI_GP:WJH07202.1;Name=WJH07202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461421.1;locus_tag=PUW31_12790;product=neutral zinc metallopeptidase;protein_id=WJH07202.1;transl_table=11 CP118128.1 Genbank gene 2590010 2590723 . - . ID=gene-PUW31_12795;Name=PUW31_12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12795 CP118128.1 Protein Homology CDS 2590010 2590723 . - 0 ID=cds-WJH07203.1;Parent=gene-PUW31_12795;Dbxref=NCBI_GP:WJH07203.1;Name=WJH07203.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=PUW31_12795;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WJH07203.1;transl_table=11 CP118128.1 Genbank gene 2590898 2591932 . - . ID=gene-PUW31_12800;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=PUW31_12800 CP118128.1 Protein Homology CDS 2590898 2591932 . - 0 ID=cds-WJH07204.1;Parent=gene-PUW31_12800;Dbxref=NCBI_GP:WJH07204.1;Name=WJH07204.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461423.1;locus_tag=PUW31_12800;product=outer membrane protein assembly factor BamC;protein_id=WJH07204.1;transl_table=11 CP118128.1 Genbank gene 2591949 2592827 . - . ID=gene-PUW31_12805;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=PUW31_12805 CP118128.1 Protein Homology CDS 2591949 2592827 . - 0 ID=cds-WJH07205.1;Parent=gene-PUW31_12805;Dbxref=NCBI_GP:WJH07205.1;Name=WJH07205.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=PUW31_12805;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WJH07205.1;transl_table=11 CP118128.1 Genbank gene 2592973 2593545 . + . ID=gene-PUW31_12810;Name=PUW31_12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12810 CP118128.1 Protein Homology CDS 2592973 2593545 . + 0 ID=cds-WJH07206.1;Parent=gene-PUW31_12810;Dbxref=NCBI_GP:WJH07206.1;Name=WJH07206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=PUW31_12810;product=glycine cleavage system transcriptional repressor;protein_id=WJH07206.1;transl_table=11 CP118128.1 Genbank gene 2593545 2594015 . + . ID=gene-PUW31_12815;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=PUW31_12815 CP118128.1 Protein Homology CDS 2593545 2594015 . + 0 ID=cds-WJH07207.1;Parent=gene-PUW31_12815;Dbxref=NCBI_GP:WJH07207.1;Name=WJH07207.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461426.1;locus_tag=PUW31_12815;product=thioredoxin-dependent thiol peroxidase;protein_id=WJH07207.1;transl_table=11 CP118128.1 Genbank gene 2594062 2595201 . - . ID=gene-PUW31_12820;Name=PUW31_12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12820 CP118128.1 Protein Homology CDS 2594062 2595201 . - 0 ID=cds-WJH07208.1;Parent=gene-PUW31_12820;Dbxref=NCBI_GP:WJH07208.1;Name=WJH07208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000706371.1;locus_tag=PUW31_12820;product=glycerate kinase;protein_id=WJH07208.1;transl_table=11 CP118128.1 Genbank gene 2595207 2596475 . - . ID=gene-PUW31_12825;Name=PUW31_12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12825 CP118128.1 Protein Homology CDS 2595207 2596475 . - 0 ID=cds-WJH07209.1;Parent=gene-PUW31_12825;Dbxref=NCBI_GP:WJH07209.1;Name=WJH07209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090684.1;locus_tag=PUW31_12825;product=GntP family permease;protein_id=WJH07209.1;transl_table=11 CP118128.1 Genbank gene 2596543 2597730 . - . ID=gene-PUW31_12830;Name=PUW31_12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12830 CP118128.1 Protein Homology CDS 2596543 2597730 . - 0 ID=cds-WJH07210.1;Parent=gene-PUW31_12830;Dbxref=NCBI_GP:WJH07210.1;Name=WJH07210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667973.1;locus_tag=PUW31_12830;product=sugar diacid recognition domain-containing protein;protein_id=WJH07210.1;transl_table=11 CP118128.1 Genbank pseudogene 2598006 2599072 . - . ID=gene-PUW31_12835;Name=PUW31_12835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_12835;pseudo=true CP118128.1 Protein Homology CDS 2598006 2599072 . - 0 ID=cds-PUW31_12835;Parent=gene-PUW31_12835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461428.1;locus_tag=PUW31_12835;product=AI-2E family transporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2599280 2600743 . + . ID=gene-PUW31_12840;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=PUW31_12840 CP118128.1 Protein Homology CDS 2599280 2600743 . + 0 ID=cds-WJH07211.1;Parent=gene-PUW31_12840;Dbxref=NCBI_GP:WJH07211.1;Name=WJH07211.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461429.1;locus_tag=PUW31_12840;product=beta-barrel assembly-enhancing protease;protein_id=WJH07211.1;transl_table=11 CP118128.1 Genbank gene 2600783 2601142 . + . ID=gene-PUW31_12845;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=PUW31_12845 CP118128.1 Protein Homology CDS 2600783 2601142 . + 0 ID=cds-WJH07212.1;Parent=gene-PUW31_12845;Dbxref=NCBI_GP:WJH07212.1;Name=WJH07212.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461430.1;locus_tag=PUW31_12845;product=arsenate reductase (glutaredoxin);protein_id=WJH07212.1;transl_table=11 CP118128.1 Genbank gene 2601169 2601870 . - . ID=gene-PUW31_12850;Name=PUW31_12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12850 CP118128.1 Protein Homology CDS 2601169 2601870 . - 0 ID=cds-WJH10740.1;Parent=gene-PUW31_12850;Dbxref=NCBI_GP:WJH10740.1;Name=WJH10740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=PUW31_12850;product=DnaA inactivator Hda;protein_id=WJH10740.1;transl_table=11 CP118128.1 Genbank gene 2601965 2603254 . - . ID=gene-PUW31_12855;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=PUW31_12855 CP118128.1 Protein Homology CDS 2601965 2603254 . - 0 ID=cds-WJH07213.1;Parent=gene-PUW31_12855;Dbxref=NCBI_GP:WJH07213.1;Name=WJH07213.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461432.1;locus_tag=PUW31_12855;product=uracil permease;protein_id=WJH07213.1;transl_table=11 CP118128.1 Genbank gene 2603341 2603967 . - . ID=gene-PUW31_12860;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=PUW31_12860 CP118128.1 Protein Homology CDS 2603341 2603967 . - 0 ID=cds-WJH07214.1;Parent=gene-PUW31_12860;Dbxref=NCBI_GP:WJH07214.1;Name=WJH07214.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=PUW31_12860;product=uracil phosphoribosyltransferase;protein_id=WJH07214.1;transl_table=11 CP118128.1 Genbank gene 2604379 2605416 . + . ID=gene-PUW31_12865;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=PUW31_12865 CP118128.1 Protein Homology CDS 2604379 2605416 . + 0 ID=cds-WJH07215.1;Parent=gene-PUW31_12865;Dbxref=NCBI_GP:WJH07215.1;Name=WJH07215.1;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001656828.1;locus_tag=PUW31_12865;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WJH07215.1;transl_table=11 CP118128.1 Genbank gene 2605416 2606054 . + . ID=gene-PUW31_12870;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=PUW31_12870 CP118128.1 Protein Homology CDS 2605416 2606054 . + 0 ID=cds-WJH07216.1;Parent=gene-PUW31_12870;Dbxref=NCBI_GP:WJH07216.1;Name=WJH07216.1;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461435.1;locus_tag=PUW31_12870;product=phosphoribosylglycinamide formyltransferase;protein_id=WJH07216.1;transl_table=11 CP118128.1 Genbank gene 2606243 2608309 . + . ID=gene-PUW31_12875;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=PUW31_12875 CP118128.1 Protein Homology CDS 2606243 2608309 . + 0 ID=cds-WJH07217.1;Parent=gene-PUW31_12875;Dbxref=NCBI_GP:WJH07217.1;Name=WJH07217.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461436.1;locus_tag=PUW31_12875;product=polyphosphate kinase 1;protein_id=WJH07217.1;transl_table=11 CP118128.1 Genbank gene 2608314 2609855 . + . ID=gene-PUW31_12880;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=PUW31_12880 CP118128.1 Protein Homology CDS 2608314 2609855 . + 0 ID=cds-WJH10741.1;Parent=gene-PUW31_12880;Dbxref=NCBI_GP:WJH10741.1;Name=WJH10741.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461437.1;locus_tag=PUW31_12880;product=exopolyphosphatase;protein_id=WJH10741.1;transl_table=11 CP118128.1 Genbank pseudogene 2609891 2612103 . - . ID=gene-PUW31_12885;Name=PUW31_12885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_12885;pseudo=true CP118128.1 Protein Homology CDS 2609891 2612103 . - 0 ID=cds-PUW31_12885;Parent=gene-PUW31_12885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461438.1;locus_tag=PUW31_12885;product=sensor domain-containing phosphodiesterase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2612200 2612337 . - . ID=gene-PUW31_12890;Name=PUW31_12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12890 CP118128.1 Protein Homology CDS 2612200 2612337 . - 0 ID=cds-WJH07218.1;Parent=gene-PUW31_12890;Dbxref=NCBI_GP:WJH07218.1;Name=WJH07218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448898.1;locus_tag=PUW31_12890;product=hypothetical protein;protein_id=WJH07218.1;transl_table=11 CP118128.1 Genbank gene 2612516 2612707 . + . ID=gene-PUW31_12895;Name=PUW31_12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12895 CP118128.1 Protein Homology CDS 2612516 2612707 . + 0 ID=cds-WJH07219.1;Parent=gene-PUW31_12895;Dbxref=NCBI_GP:WJH07219.1;Name=WJH07219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461441.1;locus_tag=PUW31_12895;product=YfgG family protein;protein_id=WJH07219.1;transl_table=11 CP118128.1 Genbank pseudogene 2612785 2612928 . - . ID=gene-PUW31_12900;Name=PUW31_12900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_12900;pseudo=true CP118128.1 Protein Homology CDS 2612785 2612928 . - 0 ID=cds-PUW31_12900;Parent=gene-PUW31_12900;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448901.1;locus_tag=PUW31_12900;product=hypothetical protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2613401 2613730 . + . ID=gene-PUW31_12905;Name=PUW31_12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12905 CP118128.1 Protein Homology CDS 2613401 2613730 . + 0 ID=cds-WJH07220.1;Parent=gene-PUW31_12905;Dbxref=NCBI_GP:WJH07220.1;Name=WJH07220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461443.1;locus_tag=PUW31_12905;product=DUF1493 family protein;protein_id=WJH07220.1;transl_table=11 CP118128.1 Genbank pseudogene 2613810 2614118 . - . ID=gene-PUW31_12910;Name=PUW31_12910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_12910;pseudo=true CP118128.1 Protein Homology CDS 2613810 2614118 . - 0 ID=cds-PUW31_12910;Parent=gene-PUW31_12910;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611898.1;locus_tag=PUW31_12910;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2614260 2615837 . - . ID=gene-PUW31_12915;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=PUW31_12915 CP118128.1 Protein Homology CDS 2614260 2615837 . - 0 ID=cds-WJH07221.1;Parent=gene-PUW31_12915;Dbxref=NCBI_GP:WJH07221.1;Name=WJH07221.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=PUW31_12915;product=glutamine-hydrolyzing GMP synthase;protein_id=WJH07221.1;transl_table=11 CP118128.1 Genbank gene 2615907 2617373 . - . ID=gene-PUW31_12920;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=PUW31_12920 CP118128.1 Protein Homology CDS 2615907 2617373 . - 0 ID=cds-WJH07222.1;Parent=gene-PUW31_12920;Dbxref=NCBI_GP:WJH07222.1;Name=WJH07222.1;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=PUW31_12920;product=IMP dehydrogenase;protein_id=WJH07222.1;transl_table=11 CP118128.1 Genbank pseudogene 2617534 2618882 . + . ID=gene-PUW31_12925;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=pseudogene;locus_tag=PUW31_12925;pseudo=true CP118128.1 Protein Homology CDS 2617534 2618882 . + 0 ID=cds-PUW31_12925;Parent=gene-PUW31_12925;Note=frameshifted;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461447.1;locus_tag=PUW31_12925;product=exodeoxyribonuclease VII large subunit;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2619044 2625140 . - . ID=gene-PUW31_12930;Name=shdA;gbkey=Gene;gene=shdA;gene_biotype=pseudogene;locus_tag=PUW31_12930;pseudo=true CP118128.1 Protein Homology CDS 2619044 2625140 . - 0 ID=cds-PUW31_12930;Parent=gene-PUW31_12930;Note=frameshifted;Ontology_term=GO:0019867;gbkey=CDS;gene=shdA;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835061.1;locus_tag=PUW31_12930;product=fibronectin-binding autotransporter adhesin ShdA;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2625700 2625786 . - . ID=gene-PUW31_12935;Name=PUW31_12935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_12935;pseudo=true CP118128.1 Protein Homology CDS 2625700 2625786 . - 0 ID=cds-PUW31_12935;Parent=gene-PUW31_12935;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=PUW31_12935;product=IS1 family transposase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2625801 2633103 . - . ID=gene-PUW31_12940;Name=ratB;gbkey=Gene;gene=ratB;gene_biotype=pseudogene;locus_tag=PUW31_12940;pseudo=true CP118128.1 Protein Homology CDS 2625801 2633103 . - 0 ID=cds-PUW31_12940;Parent=gene-PUW31_12940;Note=frameshifted;gbkey=CDS;gene=ratB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=PUW31_12940;product=DUF823/DUF824 repeat adhesin RatB;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2633269 2638866 . - . ID=gene-PUW31_12945;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;locus_tag=PUW31_12945 CP118128.1 Protein Homology CDS 2633269 2638866 . - 0 ID=cds-WJH07223.1;Parent=gene-PUW31_12945;Dbxref=NCBI_GP:WJH07223.1;Name=WJH07223.1;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461450.1;locus_tag=PUW31_12945;product=DUF823/DUF824 repeat adhesin RatA;protein_id=WJH07223.1;transl_table=11 CP118128.1 Genbank gene 2638984 2639943 . - . ID=gene-PUW31_12950;Name=PUW31_12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12950 CP118128.1 Protein Homology CDS 2638984 2639943 . - 0 ID=cds-WJH07224.1;Parent=gene-PUW31_12950;Dbxref=NCBI_GP:WJH07224.1;Name=WJH07224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461451.1;locus_tag=PUW31_12950;product=SinI family autotransporter-associated protein;protein_id=WJH07224.1;transl_table=11 CP118128.1 Genbank pseudogene 2640001 2642194 . - . ID=gene-PUW31_12955;Name=sinH;gbkey=Gene;gene=sinH;gene_biotype=pseudogene;locus_tag=PUW31_12955;pseudo=true CP118128.1 Protein Homology CDS 2640001 2642194 . - 0 ID=cds-PUW31_12955;Parent=gene-PUW31_12955;Note=frameshifted;gbkey=CDS;gene=sinH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461452.1;locus_tag=PUW31_12955;product=intimin-like inverse autotransporter SinH;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2642540 2642761 . - . ID=gene-PUW31_12960;Name=PUW31_12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12960 CP118128.1 Protein Homology CDS 2642540 2642761 . - 0 ID=cds-WJH07225.1;Parent=gene-PUW31_12960;Dbxref=NCBI_GP:WJH07225.1;Name=WJH07225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461453.1;locus_tag=PUW31_12960;product=zinc ribbon domain-containing protein;protein_id=WJH07225.1;transl_table=11 CP118128.1 Genbank gene 2642850 2644322 . - . ID=gene-PUW31_12965;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=PUW31_12965 CP118128.1 Protein Homology CDS 2642850 2644322 . - 0 ID=cds-WJH07226.1;Parent=gene-PUW31_12965;Dbxref=NCBI_GP:WJH07226.1;Name=WJH07226.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=PUW31_12965;product=ribosome biogenesis GTPase Der;protein_id=WJH07226.1;transl_table=11 CP118128.1 Genbank gene 2644441 2645619 . - . ID=gene-PUW31_12970;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=PUW31_12970 CP118128.1 Protein Homology CDS 2644441 2645619 . - 0 ID=cds-WJH07227.1;Parent=gene-PUW31_12970;Dbxref=NCBI_GP:WJH07227.1;Name=WJH07227.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461455.1;locus_tag=PUW31_12970;product=outer membrane protein assembly factor BamB;protein_id=WJH07227.1;transl_table=11 CP118128.1 Genbank gene 2645630 2646250 . - . ID=gene-PUW31_12975;Name=PUW31_12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_12975 CP118128.1 Protein Homology CDS 2645630 2646250 . - 0 ID=cds-WJH07228.1;Parent=gene-PUW31_12975;Dbxref=NCBI_GP:WJH07228.1;Name=WJH07228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461456.1;locus_tag=PUW31_12975;product=YfgM family protein;protein_id=WJH07228.1;transl_table=11 CP118128.1 Genbank pseudogene 2646264 2647537 . - . ID=gene-PUW31_12980;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=pseudogene;locus_tag=PUW31_12980;pseudo=true CP118128.1 Protein Homology CDS 2646264 2647537 . - 0 ID=cds-PUW31_12980;Parent=gene-PUW31_12980;Note=frameshifted;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461457.1;locus_tag=PUW31_12980;product=histidine--tRNA ligase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2647648 2648766 . - . ID=gene-PUW31_12985;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=PUW31_12985 CP118128.1 Protein Homology CDS 2647648 2648766 . - 0 ID=cds-WJH07229.1;Parent=gene-PUW31_12985;Dbxref=NCBI_GP:WJH07229.1;Name=WJH07229.1;Ontology_term=GO:0044237,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity|0046429||IEA;go_process=cellular metabolic process|0044237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461458.1;locus_tag=PUW31_12985;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WJH07229.1;transl_table=11 CP118128.1 Genbank gene 2648793 2649797 . - . ID=gene-PUW31_12990;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=PUW31_12990 CP118128.1 Protein Homology CDS 2648793 2649797 . - 0 ID=cds-WJH07230.1;Parent=gene-PUW31_12990;Dbxref=NCBI_GP:WJH07230.1;Name=WJH07230.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461459.1;locus_tag=PUW31_12990;product=cytoskeleton protein RodZ;protein_id=WJH07230.1;transl_table=11 CP118128.1 Genbank pseudogene 2650089 2651254 . - . ID=gene-PUW31_12995;Name=PUW31_12995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_12995;pseudo=true CP118128.1 Protein Homology CDS 2650089 2651254 . - 0 ID=cds-PUW31_12995;Parent=gene-PUW31_12995;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461460.1;locus_tag=PUW31_12995;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2651461 2651892 . - . ID=gene-PUW31_13000;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=PUW31_13000 CP118128.1 Protein Homology CDS 2651461 2651892 . - 0 ID=cds-WJH07231.1;Parent=gene-PUW31_13000;Dbxref=NCBI_GP:WJH07231.1;Name=WJH07231.1;Ontology_term=GO:0006165,GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;go_process=nucleoside diphosphate phosphorylation|0006165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=PUW31_13000;product=nucleoside-diphosphate kinase;protein_id=WJH07231.1;transl_table=11 CP118128.1 Genbank gene 2652013 2652876 . - . ID=gene-PUW31_13005;Name=PUW31_13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13005 CP118128.1 Protein Homology CDS 2652013 2652876 . - 0 ID=cds-WJH07232.1;Parent=gene-PUW31_13005;Dbxref=NCBI_GP:WJH07232.1;Name=WJH07232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461462.1;locus_tag=PUW31_13005;product=4Fe-4S binding protein;protein_id=WJH07232.1;transl_table=11 CP118128.1 Genbank gene 2652876 2653685 . - . ID=gene-PUW31_13010;Name=PUW31_13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13010 CP118128.1 Protein Homology CDS 2652876 2653685 . - 0 ID=cds-WJH07233.1;Parent=gene-PUW31_13010;Dbxref=NCBI_GP:WJH07233.1;Name=WJH07233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461463.2;locus_tag=PUW31_13010;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WJH07233.1;transl_table=11 CP118128.1 Genbank gene 2653678 2654307 . - . ID=gene-PUW31_13015;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=PUW31_13015 CP118128.1 Protein Homology CDS 2653678 2654307 . - 0 ID=cds-WJH07234.1;Parent=gene-PUW31_13015;Dbxref=NCBI_GP:WJH07234.1;Name=WJH07234.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461464.1;locus_tag=PUW31_13015;product=dimethylsulfoxide reductase subunit B;protein_id=WJH07234.1;transl_table=11 CP118128.1 Genbank gene 2654304 2656709 . - . ID=gene-PUW31_13020;Name=PUW31_13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13020 CP118128.1 Protein Homology CDS 2654304 2656709 . - 0 ID=cds-WJH07235.1;Parent=gene-PUW31_13020;Dbxref=NCBI_GP:WJH07235.1;Name=WJH07235.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461465.1;locus_tag=PUW31_13020;product=molybdopterin-dependent oxidoreductase;protein_id=WJH07235.1;transl_table=11 CP118128.1 Genbank gene 2656838 2659153 . - . ID=gene-PUW31_13025;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=PUW31_13025 CP118128.1 Protein Homology CDS 2656838 2659153 . - 0 ID=cds-WJH07236.1;Parent=gene-PUW31_13025;Dbxref=NCBI_GP:WJH07236.1;Name=WJH07236.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461466.1;locus_tag=PUW31_13025;product=peptidoglycan glycosyltransferase PbpC;protein_id=WJH07236.1;transl_table=11 CP118128.1 Genbank gene 2659154 2664088 . - . ID=gene-PUW31_13030;Name=PUW31_13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13030 CP118128.1 Protein Homology CDS 2659154 2664088 . - 0 ID=cds-WJH07237.1;Parent=gene-PUW31_13030;Dbxref=NCBI_GP:WJH07237.1;Name=WJH07237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461467.1;locus_tag=PUW31_13030;product=alpha-2-macroglobulin;protein_id=WJH07237.1;transl_table=11 CP118128.1 Genbank gene 2664297 2665139 . + . ID=gene-PUW31_13035;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=PUW31_13035 CP118128.1 Protein Homology CDS 2664297 2665139 . + 0 ID=cds-WJH07238.1;Parent=gene-PUW31_13035;Dbxref=NCBI_GP:WJH07238.1;Name=WJH07238.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461468.1;locus_tag=PUW31_13035;product=3-mercaptopyruvate sulfurtransferase;protein_id=WJH07238.1;transl_table=11 CP118128.1 Genbank gene 2665119 2665343 . - . ID=gene-PUW31_13040;Name=PUW31_13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13040 CP118128.1 Protein Homology CDS 2665119 2665343 . - 0 ID=cds-WJH07239.1;Parent=gene-PUW31_13040;Dbxref=NCBI_GP:WJH07239.1;Name=WJH07239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344128.1;locus_tag=PUW31_13040;product=hypothetical protein;protein_id=WJH07239.1;transl_table=11 CP118128.1 Genbank gene 2665385 2666053 . + . ID=gene-PUW31_13045;Name=PUW31_13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13045 CP118128.1 Protein Homology CDS 2665385 2666053 . + 0 ID=cds-WJH07240.1;Parent=gene-PUW31_13045;Dbxref=NCBI_GP:WJH07240.1;Name=WJH07240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461469.1;locus_tag=PUW31_13045;product=DUF5066 family protein;protein_id=WJH07240.1;transl_table=11 CP118128.1 Genbank gene 2666469 2666585 . + . ID=gene-PUW31_13050;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=PUW31_13050 CP118128.1 Protein Homology CDS 2666469 2666585 . + 0 ID=cds-WJH07241.1;Parent=gene-PUW31_13050;Dbxref=NCBI_GP:WJH07241.1;Name=WJH07241.1;gbkey=CDS;gene=timP;inference=COORDINATES: protein motif:HMM:NF040796.1;locus_tag=PUW31_13050;product=small toxic inner membrane protein TimP;protein_id=WJH07241.1;transl_table=11 CP118128.1 Genbank gene 2666622 2667398 . - . ID=gene-PUW31_13055;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=PUW31_13055 CP118128.1 Protein Homology CDS 2666622 2667398 . - 0 ID=cds-WJH07242.1;Parent=gene-PUW31_13055;Dbxref=NCBI_GP:WJH07242.1;Name=WJH07242.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311415.2;locus_tag=PUW31_13055;product=enhanced serine sensitivity protein SseB;protein_id=WJH07242.1;transl_table=11 CP118128.1 Genbank gene 2667508 2668791 . - . ID=gene-PUW31_13060;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=PUW31_13060 CP118128.1 Protein Homology CDS 2667508 2668791 . - 0 ID=cds-WJH07243.1;Parent=gene-PUW31_13060;Dbxref=NCBI_GP:WJH07243.1;Name=WJH07243.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461471.1;locus_tag=PUW31_13060;product=aminopeptidase PepB;protein_id=WJH07243.1;transl_table=11 CP118128.1 Genbank gene 2668969 2669169 . - . ID=gene-PUW31_13065;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=PUW31_13065 CP118128.1 Protein Homology CDS 2668969 2669169 . - 0 ID=cds-WJH07244.1;Parent=gene-PUW31_13065;Dbxref=NCBI_GP:WJH07244.1;Name=WJH07244.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=PUW31_13065;product=Fe-S cluster assembly protein IscX;protein_id=WJH07244.1;transl_table=11 CP118128.1 Genbank gene 2669181 2669516 . - . ID=gene-PUW31_13070;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=PUW31_13070 CP118128.1 Protein Homology CDS 2669181 2669516 . - 0 ID=cds-WJH07245.1;Parent=gene-PUW31_13070;Dbxref=NCBI_GP:WJH07245.1;Name=WJH07245.1;Ontology_term=GO:0016226;gbkey=CDS;gene=fdx;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=PUW31_13070;product=ISC system 2Fe-2S type ferredoxin;protein_id=WJH07245.1;transl_table=11 CP118128.1 Genbank gene 2669518 2671368 . - . ID=gene-PUW31_13075;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=PUW31_13075 CP118128.1 Protein Homology CDS 2669518 2671368 . - 0 ID=cds-WJH07246.1;Parent=gene-PUW31_13075;Dbxref=NCBI_GP:WJH07246.1;Name=WJH07246.1;Ontology_term=GO:0006457,GO:0005515;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=PUW31_13075;product=Fe-S protein assembly chaperone HscA;protein_id=WJH07246.1;transl_table=11 CP118128.1 Genbank gene 2671381 2671896 . - . ID=gene-PUW31_13080;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=PUW31_13080 CP118128.1 Protein Homology CDS 2671381 2671896 . - 0 ID=cds-WJH07247.1;Parent=gene-PUW31_13080;Dbxref=NCBI_GP:WJH07247.1;Name=WJH07247.1;Ontology_term=GO:0097428,GO:0051087;gbkey=CDS;gene=hscB;go_function=chaperone binding|0051087||IEA;go_process=protein maturation by iron-sulfur cluster transfer|0097428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461475.1;locus_tag=PUW31_13080;product=co-chaperone HscB;protein_id=WJH07247.1;transl_table=11 CP118128.1 Genbank gene 2672092 2672415 . - . ID=gene-PUW31_13085;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=PUW31_13085 CP118128.1 Protein Homology CDS 2672092 2672415 . - 0 ID=cds-WJH07248.1;Parent=gene-PUW31_13085;Dbxref=NCBI_GP:WJH07248.1;Name=WJH07248.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461476.1;locus_tag=PUW31_13085;product=iron-sulfur cluster assembly protein IscA;protein_id=WJH07248.1;transl_table=11 CP118128.1 Genbank pseudogene 2672444 2672829 . - . ID=gene-PUW31_13090;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=pseudogene;locus_tag=PUW31_13090;pseudo=true CP118128.1 Protein Homology CDS 2672444 2672829 . - 0 ID=cds-PUW31_13090;Parent=gene-PUW31_13090;Note=frameshifted;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=PUW31_13090;product=Fe-S cluster assembly scaffold IscU;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2672857 2674070 . - . ID=gene-PUW31_13095;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=pseudogene;locus_tag=PUW31_13095;pseudo=true CP118128.1 Protein Homology CDS 2672857 2674070 . - 0 ID=cds-PUW31_13095;Parent=gene-PUW31_13095;Note=frameshifted;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=PUW31_13095;product=cysteine desulfurase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2674251 2674745 . - . ID=gene-PUW31_13100;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=PUW31_13100 CP118128.1 Protein Homology CDS 2674251 2674745 . - 0 ID=cds-WJH07249.1;Parent=gene-PUW31_13100;Dbxref=NCBI_GP:WJH07249.1;Name=WJH07249.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241352.1;locus_tag=PUW31_13100;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WJH07249.1;transl_table=11 CP118128.1 Genbank gene 2674905 2675636 . - . ID=gene-PUW31_13105;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=PUW31_13105 CP118128.1 Protein Homology CDS 2674905 2675636 . - 0 ID=cds-WJH07250.1;Parent=gene-PUW31_13105;Dbxref=NCBI_GP:WJH07250.1;Name=WJH07250.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461480.1;locus_tag=PUW31_13105;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WJH07250.1;transl_table=11 CP118128.1 Genbank gene 2675755 2676558 . + . ID=gene-PUW31_13110;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=PUW31_13110 CP118128.1 Protein Homology CDS 2675755 2676558 . + 0 ID=cds-WJH07251.1;Parent=gene-PUW31_13110;Dbxref=NCBI_GP:WJH07251.1;Name=WJH07251.1;Ontology_term=GO:0046854,GO:0046855,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA,inositol phosphate dephosphorylation|0046855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=PUW31_13110;product=inositol-1-monophosphatase;protein_id=WJH07251.1;transl_table=11 CP118128.1 Genbank gene 2676703 2677581 . + . ID=gene-PUW31_13115;Name=PUW31_13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13115 CP118128.1 Protein Homology CDS 2676703 2677581 . + 0 ID=cds-WJH07252.1;Parent=gene-PUW31_13115;Dbxref=NCBI_GP:WJH07252.1;Name=WJH07252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461482.1;locus_tag=PUW31_13115;product=alpha/beta hydrolase;protein_id=WJH07252.1;transl_table=11 CP118128.1 Genbank pseudogene 2677763 2678807 . + . ID=gene-PUW31_13120;Name=asrA;gbkey=Gene;gene=asrA;gene_biotype=pseudogene;locus_tag=PUW31_13120;pseudo=true CP118128.1 Protein Homology CDS 2677763 2678807 . + 0 ID=cds-PUW31_13120;Parent=gene-PUW31_13120;Note=frameshifted;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrA;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461483.1;locus_tag=PUW31_13120;product=anaerobic sulfite reductase subunit AsrA;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2678811 2679629 . + . ID=gene-PUW31_13125;Name=asrB;gbkey=Gene;gene=asrB;gene_biotype=protein_coding;locus_tag=PUW31_13125 CP118128.1 Protein Homology CDS 2678811 2679629 . + 0 ID=cds-WJH07253.1;Parent=gene-PUW31_13125;Dbxref=NCBI_GP:WJH07253.1;Name=WJH07253.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrB;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461484.1;locus_tag=PUW31_13125;product=anaerobic sulfite reductase subunit AsrB;protein_id=WJH07253.1;transl_table=11 CP118128.1 Genbank gene 2679640 2680653 . + . ID=gene-PUW31_13130;Name=asrC;gbkey=Gene;gene=asrC;gene_biotype=protein_coding;locus_tag=PUW31_13130 CP118128.1 Protein Homology CDS 2679640 2680653 . + 0 ID=cds-WJH07254.1;Parent=gene-PUW31_13130;Dbxref=NCBI_GP:WJH07254.1;Name=WJH07254.1;Ontology_term=GO:0006790,GO:0016002;gbkey=CDS;gene=asrC;go_function=sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461485.1;locus_tag=PUW31_13130;product=sulfite reductase subunit C;protein_id=WJH07254.1;transl_table=11 CP118128.1 Genbank pseudogene 2680654 2681639 . - . ID=gene-PUW31_13135;Name=PUW31_13135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_13135;pseudo=true CP118128.1 Protein Homology CDS 2680654 2681639 . - 0 ID=cds-PUW31_13135;Parent=gene-PUW31_13135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461486.1;locus_tag=PUW31_13135;product=nickel/cobalt transporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2681630 2682268 . - . ID=gene-PUW31_13140;Name=PUW31_13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13140 CP118128.1 Protein Homology CDS 2681630 2682268 . - 0 ID=cds-WJH10742.1;Parent=gene-PUW31_13140;Dbxref=NCBI_GP:WJH10742.1;Name=WJH10742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461487.1;locus_tag=PUW31_13140;product=DUF1007 family protein;protein_id=WJH10742.1;transl_table=11 CP118128.1 Genbank gene 2682394 2683671 . + . ID=gene-PUW31_13145;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=PUW31_13145 CP118128.1 Protein Homology CDS 2682394 2683671 . + 0 ID=cds-WJH07255.1;Parent=gene-PUW31_13145;Dbxref=NCBI_GP:WJH07255.1;Name=WJH07255.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461488.1;locus_tag=PUW31_13145;product=stationary phase inducible protein CsiE;protein_id=WJH07255.1;transl_table=11 CP118128.1 Genbank gene 2683666 2684805 . - . ID=gene-PUW31_13150;Name=PUW31_13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13150 CP118128.1 Protein Homology CDS 2683666 2684805 . - 0 ID=cds-WJH07256.1;Parent=gene-PUW31_13150;Dbxref=NCBI_GP:WJH07256.1;Name=WJH07256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461489.1;locus_tag=PUW31_13150;product=3-phenylpropionate MFS transporter;protein_id=WJH07256.1;transl_table=11 CP118128.1 Genbank gene 2685001 2686254 . - . ID=gene-PUW31_13155;Name=PUW31_13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13155 CP118128.1 Protein Homology CDS 2685001 2686254 . - 0 ID=cds-WJH07257.1;Parent=gene-PUW31_13155;Dbxref=NCBI_GP:WJH07257.1;Name=WJH07257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=PUW31_13155;product=serine hydroxymethyltransferase;protein_id=WJH07257.1;transl_table=11 CP118128.1 Genbank gene 2686579 2687769 . + . ID=gene-PUW31_13160;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=PUW31_13160 CP118128.1 Protein Homology CDS 2686579 2687769 . + 0 ID=cds-WJH07258.1;Parent=gene-PUW31_13160;Dbxref=NCBI_GP:WJH07258.1;Name=WJH07258.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461491.1;locus_tag=PUW31_13160;product=NO-inducible flavohemoprotein;protein_id=WJH07258.1;transl_table=11 CP118128.1 Genbank gene 2687951 2689492 . + . ID=gene-PUW31_13165;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=PUW31_13165 CP118128.1 Protein Homology CDS 2687951 2689492 . + 0 ID=cds-WJH07259.1;Parent=gene-PUW31_13165;Dbxref=NCBI_GP:WJH07259.1;Name=WJH07259.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=cadC;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461492.1;locus_tag=PUW31_13165;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WJH07259.1;transl_table=11 CP118128.1 Genbank gene 2689853 2691184 . + . ID=gene-PUW31_13170;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=PUW31_13170 CP118128.1 Protein Homology CDS 2689853 2691184 . + 0 ID=cds-WJH07260.1;Parent=gene-PUW31_13170;Dbxref=NCBI_GP:WJH07260.1;Name=WJH07260.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461493.1;locus_tag=PUW31_13170;product=cadaverine/lysine antiporter;protein_id=WJH07260.1;transl_table=11 CP118128.1 Genbank gene 2691267 2693411 . + . ID=gene-PUW31_13175;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=PUW31_13175 CP118128.1 Protein Homology CDS 2691267 2693411 . + 0 ID=cds-WJH07261.1;Parent=gene-PUW31_13175;Dbxref=NCBI_GP:WJH07261.1;Name=WJH07261.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461494.1;locus_tag=PUW31_13175;product=lysine decarboxylase CadA;protein_id=WJH07261.1;transl_table=11 CP118128.1 Genbank pseudogene 2693467 2694926 . + . ID=gene-PUW31_13180;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=pseudogene;locus_tag=PUW31_13180;pseudo=true CP118128.1 Protein Homology CDS 2693467 2694926 . + 0 ID=cds-PUW31_13180;Parent=gene-PUW31_13180;Note=frameshifted;Ontology_term=GO:0006857,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpD;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=oligopeptide transport|0006857||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461495.1;locus_tag=PUW31_13180;product=dipeptide permease DtpD;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2694975 2695313 . - . ID=gene-PUW31_13185;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=PUW31_13185 CP118128.1 Protein Homology CDS 2694975 2695313 . - 0 ID=cds-WJH07262.1;Parent=gene-PUW31_13185;Dbxref=NCBI_GP:WJH07262.1;Name=WJH07262.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=PUW31_13185;product=nitrogen regulatory protein P-II;protein_id=WJH07262.1;transl_table=11 CP118128.1 Genbank gene 2695390 2696727 . - . ID=gene-PUW31_13190;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=PUW31_13190 CP118128.1 Protein Homology CDS 2695390 2696727 . - 0 ID=cds-WJH07263.1;Parent=gene-PUW31_13190;Dbxref=NCBI_GP:WJH07263.1;Name=WJH07263.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461497.1;locus_tag=PUW31_13190;product=two-component system response regulator GlrR;protein_id=WJH07263.1;transl_table=11 CP118128.1 Genbank gene 2696724 2697488 . - . ID=gene-PUW31_13195;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=PUW31_13195 CP118128.1 Protein Homology CDS 2696724 2697488 . - 0 ID=cds-WJH07264.1;Parent=gene-PUW31_13195;Dbxref=NCBI_GP:WJH07264.1;Name=WJH07264.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461498.1;locus_tag=PUW31_13195;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WJH07264.1;transl_table=11 CP118128.1 Genbank gene 2697490 2698920 . - . ID=gene-PUW31_13200;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=PUW31_13200 CP118128.1 Protein Homology CDS 2697490 2698920 . - 0 ID=cds-WJH07265.1;Parent=gene-PUW31_13200;Dbxref=NCBI_GP:WJH07265.1;Name=WJH07265.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001676035.1;locus_tag=PUW31_13200;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WJH07265.1;transl_table=11 CP118128.1 Genbank gene 2699570 2703457 . - . ID=gene-PUW31_13205;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=PUW31_13205 CP118128.1 Protein Homology CDS 2699570 2703457 . - 0 ID=cds-WJH07266.1;Parent=gene-PUW31_13205;Dbxref=NCBI_GP:WJH07266.1;Name=WJH07266.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461500.1;locus_tag=PUW31_13205;product=phosphoribosylformylglycinamidine synthase;protein_id=WJH07266.1;transl_table=11 CP118128.1 Genbank gene 2703479 2703712 . + . ID=gene-PUW31_13210;Name=PUW31_13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13210 CP118128.1 Protein Homology CDS 2703479 2703712 . + 0 ID=cds-WJH07267.1;Parent=gene-PUW31_13210;Dbxref=NCBI_GP:WJH07267.1;Name=WJH07267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461501.1;locus_tag=PUW31_13210;product=hypothetical protein;protein_id=WJH07267.1;transl_table=11 CP118128.1 Genbank gene 2703713 2705257 . + . ID=gene-PUW31_13215;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=PUW31_13215 CP118128.1 Protein Homology CDS 2703713 2705257 . + 0 ID=cds-WJH07268.1;Parent=gene-PUW31_13215;Dbxref=NCBI_GP:WJH07268.1;Name=WJH07268.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461502.1;locus_tag=PUW31_13215;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WJH07268.1;transl_table=11 CP118128.1 Genbank gene 2705308 2705859 . - . ID=gene-PUW31_13220;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=PUW31_13220 CP118128.1 Protein Homology CDS 2705308 2705859 . - 0 ID=cds-WJH07269.1;Parent=gene-PUW31_13220;Dbxref=NCBI_GP:WJH07269.1;Name=WJH07269.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461503.1;locus_tag=PUW31_13220;product=tRNA adenosine(34) deaminase TadA;protein_id=WJH07269.1;transl_table=11 CP118128.1 Genbank gene 2705884 2706519 . - . ID=gene-PUW31_13225;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=PUW31_13225 CP118128.1 Protein Homology CDS 2705884 2706519 . - 0 ID=cds-WJH07270.1;Parent=gene-PUW31_13225;Dbxref=NCBI_GP:WJH07270.1;Name=WJH07270.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461504.1;locus_tag=PUW31_13225;product=phosphatidylglycerophosphatase C;protein_id=WJH07270.1;transl_table=11 CP118128.1 Genbank gene 2706523 2707884 . - . ID=gene-PUW31_13230;Name=PUW31_13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13230 CP118128.1 Protein Homology CDS 2706523 2707884 . - 0 ID=cds-WJH07271.1;Parent=gene-PUW31_13230;Dbxref=NCBI_GP:WJH07271.1;Name=WJH07271.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461505.1;locus_tag=PUW31_13230;product=PTS transporter subunit EIIC;protein_id=WJH07271.1;transl_table=11 CP118128.1 Genbank gene 2707895 2708788 . - . ID=gene-PUW31_13235;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=PUW31_13235 CP118128.1 Protein Homology CDS 2707895 2708788 . - 0 ID=cds-WJH07272.1;Parent=gene-PUW31_13235;Dbxref=NCBI_GP:WJH07272.1;Name=WJH07272.1;Ontology_term=GO:0006040,GO:0009254,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461506.1;locus_tag=PUW31_13235;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WJH07272.1;transl_table=11 CP118128.1 Genbank gene 2708904 2709752 . + . ID=gene-PUW31_13240;Name=PUW31_13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13240 CP118128.1 Protein Homology CDS 2708904 2709752 . + 0 ID=cds-WJH07273.1;Parent=gene-PUW31_13240;Dbxref=NCBI_GP:WJH07273.1;Name=WJH07273.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461507.1;locus_tag=PUW31_13240;product=MurR/RpiR family transcriptional regulator;protein_id=WJH07273.1;transl_table=11 CP118128.1 Genbank pseudogene 2709791 2710706 . - . ID=gene-PUW31_13245;Name=PUW31_13245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_13245;pseudo=true CP118128.1 Protein Homology CDS 2709791 2710706 . - 0 ID=cds-PUW31_13245;Parent=gene-PUW31_13245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461508.1;locus_tag=PUW31_13245;product=oxidoreductase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2710728 2711923 . - . ID=gene-PUW31_13250;Name=PUW31_13250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_13250;pseudo=true CP118128.1 Protein Homology CDS 2710728 2711923 . - 0 ID=cds-PUW31_13250;Parent=gene-PUW31_13250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461509.1;locus_tag=PUW31_13250;product=OFA family MFS transporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2712039 2712965 . + . ID=gene-PUW31_13255;Name=PUW31_13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13255 CP118128.1 Protein Homology CDS 2712039 2712965 . + 0 ID=cds-WJH07274.1;Parent=gene-PUW31_13255;Dbxref=NCBI_GP:WJH07274.1;Name=WJH07274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461510.1;locus_tag=PUW31_13255;product=LysR family transcriptional regulator;protein_id=WJH07274.1;transl_table=11 CP118128.1 Genbank gene 2713003 2713263 . + . ID=gene-PUW31_13260;Name=PUW31_13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13260 CP118128.1 Protein Homology CDS 2713003 2713263 . + 0 ID=cds-WJH07275.1;Parent=gene-PUW31_13260;Dbxref=NCBI_GP:WJH07275.1;Name=WJH07275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461511.1;locus_tag=PUW31_13260;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WJH07275.1;transl_table=11 CP118128.1 Genbank gene 2713375 2713755 . - . ID=gene-PUW31_13265;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=PUW31_13265 CP118128.1 Protein Homology CDS 2713375 2713755 . - 0 ID=cds-WJH07276.1;Parent=gene-PUW31_13265;Dbxref=NCBI_GP:WJH07276.1;Name=WJH07276.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461512.1;locus_tag=PUW31_13265;product=holo-ACP synthase;protein_id=WJH07276.1;transl_table=11 CP118128.1 Genbank gene 2713755 2714486 . - . ID=gene-PUW31_13270;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=PUW31_13270 CP118128.1 Protein Homology CDS 2713755 2714486 . - 0 ID=cds-WJH07277.1;Parent=gene-PUW31_13270;Dbxref=NCBI_GP:WJH07277.1;Name=WJH07277.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461513.1;locus_tag=PUW31_13270;product=pyridoxine 5'-phosphate synthase;protein_id=WJH07277.1;transl_table=11 CP118128.1 Genbank gene 2714498 2715226 . - . ID=gene-PUW31_13275;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=PUW31_13275 CP118128.1 Protein Homology CDS 2714498 2715226 . - 0 ID=cds-WJH07278.1;Parent=gene-PUW31_13275;Dbxref=NCBI_GP:WJH07278.1;Name=WJH07278.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461514.1;locus_tag=PUW31_13275;product=DNA repair protein RecO;protein_id=WJH07278.1;transl_table=11 CP118128.1 Genbank pseudogene 2715238 2716142 . - . ID=gene-PUW31_13280;Name=era;gbkey=Gene;gene=era;gene_biotype=pseudogene;locus_tag=PUW31_13280;pseudo=true CP118128.1 Protein Homology CDS 2715238 2716142 . - 0 ID=cds-PUW31_13280;Parent=gene-PUW31_13280;Note=frameshifted;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0019843,GO:0043022;gbkey=CDS;gene=era;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,rRNA binding|0019843||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461515.1;locus_tag=PUW31_13280;product=GTPase Era;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2716139 2716819 . - . ID=gene-PUW31_13285;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=PUW31_13285 CP118128.1 Protein Homology CDS 2716139 2716819 . - 0 ID=cds-WJH07279.1;Parent=gene-PUW31_13285;Dbxref=NCBI_GP:WJH07279.1;Name=WJH07279.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=PUW31_13285;product=ribonuclease III;protein_id=WJH07279.1;transl_table=11 CP118128.1 Genbank gene 2717093 2718067 . - . ID=gene-PUW31_13290;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=PUW31_13290 CP118128.1 Protein Homology CDS 2717093 2718067 . - 0 ID=cds-WJH07280.1;Parent=gene-PUW31_13290;Dbxref=NCBI_GP:WJH07280.1;Name=WJH07280.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461517.1;locus_tag=PUW31_13290;product=signal peptidase I;protein_id=WJH07280.1;transl_table=11 CP118128.1 Genbank gene 2718084 2719883 . - . ID=gene-PUW31_13295;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=PUW31_13295 CP118128.1 Protein Homology CDS 2718084 2719883 . - 0 ID=cds-WJH07281.1;Parent=gene-PUW31_13295;Dbxref=NCBI_GP:WJH07281.1;Name=WJH07281.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461518.1;locus_tag=PUW31_13295;product=translation elongation factor 4;protein_id=WJH07281.1;transl_table=11 CP118128.1 Genbank gene 2720134 2720613 . - . ID=gene-PUW31_13300;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=PUW31_13300 CP118128.1 Protein Homology CDS 2720134 2720613 . - 0 ID=cds-WJH07282.1;Parent=gene-PUW31_13300;Dbxref=NCBI_GP:WJH07282.1;Name=WJH07282.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461572.1;locus_tag=PUW31_13300;product=SoxR-reducing system protein RseC;protein_id=WJH07282.1;transl_table=11 CP118128.1 Genbank gene 2720610 2721566 . - . ID=gene-PUW31_13305;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=PUW31_13305 CP118128.1 Protein Homology CDS 2720610 2721566 . - 0 ID=cds-WJH07283.1;Parent=gene-PUW31_13305;Dbxref=NCBI_GP:WJH07283.1;Name=WJH07283.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461573.1;locus_tag=PUW31_13305;product=sigma-E factor regulatory protein RseB;protein_id=WJH07283.1;transl_table=11 CP118128.1 Genbank gene 2721566 2722216 . - . ID=gene-PUW31_13310;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=PUW31_13310 CP118128.1 Protein Homology CDS 2721566 2722216 . - 0 ID=cds-WJH07284.1;Parent=gene-PUW31_13310;Dbxref=NCBI_GP:WJH07284.1;Name=WJH07284.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461574.1;locus_tag=PUW31_13310;product=anti-sigma-E factor RseA;protein_id=WJH07284.1;transl_table=11 CP118128.1 Genbank gene 2722248 2722823 . - . ID=gene-PUW31_13315;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=PUW31_13315 CP118128.1 Protein Homology CDS 2722248 2722823 . - 0 ID=cds-WJH07285.1;Parent=gene-PUW31_13315;Dbxref=NCBI_GP:WJH07285.1;Name=WJH07285.1;Ontology_term=GO:0006352,GO:0006979,GO:0016987,GO:0005737;gbkey=CDS;gene=rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=PUW31_13315;product=RNA polymerase sigma factor RpoE;protein_id=WJH07285.1;transl_table=11 CP118128.1 Genbank gene 2722820 2722984 . - . ID=gene-PUW31_13320;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=PUW31_13320 CP118128.1 Protein Homology CDS 2722820 2722984 . - 0 ID=cds-WJH07286.1;Parent=gene-PUW31_13320;Dbxref=NCBI_GP:WJH07286.1;Name=WJH07286.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344135.1;locus_tag=PUW31_13320;product=rpoE leader peptide RseD;protein_id=WJH07286.1;transl_table=11 CP118128.1 Genbank gene 2723248 2724870 . + . ID=gene-PUW31_13325;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=PUW31_13325 CP118128.1 Protein Homology CDS 2723248 2724870 . + 0 ID=cds-WJH07287.1;Parent=gene-PUW31_13325;Dbxref=NCBI_GP:WJH07287.1;Name=WJH07287.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461576.1;locus_tag=PUW31_13325;product=L-aspartate oxidase;protein_id=WJH07287.1;transl_table=11 CP118128.1 Genbank gene 2724855 2725592 . - . ID=gene-PUW31_13330;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=PUW31_13330 CP118128.1 Protein Homology CDS 2724855 2725592 . - 0 ID=cds-WJH07288.1;Parent=gene-PUW31_13330;Dbxref=NCBI_GP:WJH07288.1;Name=WJH07288.1;gbkey=CDS;gene=trmN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461577.1;locus_tag=PUW31_13330;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WJH07288.1;transl_table=11 CP118128.1 Genbank gene 2725722 2727056 . + . ID=gene-PUW31_13335;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=PUW31_13335 CP118128.1 Protein Homology CDS 2725722 2727056 . + 0 ID=cds-WJH07289.1;Parent=gene-PUW31_13335;Dbxref=NCBI_GP:WJH07289.1;Name=WJH07289.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461578.1;locus_tag=PUW31_13335;product=ATP-dependent RNA helicase SrmB;protein_id=WJH07289.1;transl_table=11 CP118128.1 Genbank gene 2727074 2727973 . - . ID=gene-PUW31_13340;Name=PUW31_13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13340 CP118128.1 Protein Homology CDS 2727074 2727973 . - 0 ID=cds-WJH07290.1;Parent=gene-PUW31_13340;Dbxref=NCBI_GP:WJH07290.1;Name=WJH07290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461579.1;locus_tag=PUW31_13340;product=LysR family transcriptional regulator;protein_id=WJH07290.1;transl_table=11 CP118128.1 Genbank gene 2728076 2728663 . + . ID=gene-PUW31_13345;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=PUW31_13345 CP118128.1 Protein Homology CDS 2728076 2728663 . + 0 ID=cds-WJH07291.1;Parent=gene-PUW31_13345;Dbxref=NCBI_GP:WJH07291.1;Name=WJH07291.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461580.1;locus_tag=PUW31_13345;product=cysteine/O-acetylserine transporter;protein_id=WJH07291.1;transl_table=11 CP118128.1 Genbank gene 2728725 2729108 . - . ID=gene-PUW31_13350;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=PUW31_13350 CP118128.1 Protein Homology CDS 2728725 2729108 . - 0 ID=cds-WJH07292.1;Parent=gene-PUW31_13350;Dbxref=NCBI_GP:WJH07292.1;Name=WJH07292.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=PUW31_13350;product=autonomous glycyl radical cofactor GrcA;protein_id=WJH07292.1;transl_table=11 CP118128.1 Genbank gene 2729427 2730116 . + . ID=gene-PUW31_13355;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=PUW31_13355 CP118128.1 Protein Homology CDS 2729427 2730116 . + 0 ID=cds-WJH07293.1;Parent=gene-PUW31_13355;Dbxref=NCBI_GP:WJH07293.1;Name=WJH07293.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461582.1;locus_tag=PUW31_13355;product=uracil-DNA glycosylase;protein_id=WJH07293.1;transl_table=11 CP118128.1 Genbank gene 2730232 2731269 . - . ID=gene-PUW31_13360;Name=PUW31_13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13360 CP118128.1 Protein Homology CDS 2730232 2731269 . - 0 ID=cds-WJH07294.1;Parent=gene-PUW31_13360;Dbxref=NCBI_GP:WJH07294.1;Name=WJH07294.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461583.1;locus_tag=PUW31_13360;product=tRNA/rRNA methyltransferase;protein_id=WJH07294.1;transl_table=11 CP118128.1 Genbank gene 2731473 2731892 . + . ID=gene-PUW31_13365;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=PUW31_13365 CP118128.1 Protein Homology CDS 2731473 2731892 . + 0 ID=cds-WJH07295.1;Parent=gene-PUW31_13365;Dbxref=NCBI_GP:WJH07295.1;Name=WJH07295.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461584.1;locus_tag=PUW31_13365;product=thioredoxin TrxC;protein_id=WJH07295.1;transl_table=11 CP118128.1 Genbank gene 2731965 2732645 . + . ID=gene-PUW31_13370;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=PUW31_13370 CP118128.1 Protein Homology CDS 2731965 2732645 . + 0 ID=cds-WJH07296.1;Parent=gene-PUW31_13370;Dbxref=NCBI_GP:WJH07296.1;Name=WJH07296.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461585.1;locus_tag=PUW31_13370;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WJH07296.1;transl_table=11 CP118128.1 Genbank gene 2732699 2735359 . + . ID=gene-PUW31_13375;Name=pat;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=PUW31_13375 CP118128.1 Protein Homology CDS 2732699 2735359 . + 0 ID=cds-WJH07297.1;Parent=gene-PUW31_13375;Dbxref=NCBI_GP:WJH07297.1;Name=WJH07297.1;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461586.1;locus_tag=PUW31_13375;product=protein lysine acetyltransferase;protein_id=WJH07297.1;transl_table=11 CP118128.1 Genbank pseudogene 2735449 2735490 . + . ID=gene-PUW31_13380;Name=PUW31_13380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_13380;pseudo=true CP118128.1 Protein Homology CDS 2735449 2735490 . + 0 ID=cds-PUW31_13380;Parent=gene-PUW31_13380;Note=too short;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051192.1;locus_tag=PUW31_13380;product=hypothetical protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2735474 2736829 . + . ID=gene-PUW31_13385;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=PUW31_13385 CP118128.1 Protein Homology CDS 2735474 2736829 . + 0 ID=cds-WJH10743.1;Parent=gene-PUW31_13385;Dbxref=NCBI_GP:WJH10743.1;Name=WJH10743.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=PUW31_13385;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WJH10743.1;transl_table=11 CP118128.1 Genbank gene 2736874 2737197 . + . ID=gene-PUW31_13390;Name=PUW31_13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13390 CP118128.1 Protein Homology CDS 2736874 2737197 . + 0 ID=cds-WJH07298.1;Parent=gene-PUW31_13390;Dbxref=NCBI_GP:WJH07298.1;Name=WJH07298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461588.1;locus_tag=PUW31_13390;product=YfiM family lipoprotein;protein_id=WJH07298.1;transl_table=11 CP118128.1 Genbank gene 2737194 2738495 . - . ID=gene-PUW31_13395;Name=PUW31_13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13395 CP118128.1 Protein Homology CDS 2737194 2738495 . - 0 ID=cds-WJH07299.1;Parent=gene-PUW31_13395;Dbxref=NCBI_GP:WJH07299.1;Name=WJH07299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461589.1;locus_tag=PUW31_13395;product=MFS transporter;protein_id=WJH07299.1;transl_table=11 CP118128.1 Genbank gene 2738599 2739054 . - . ID=gene-PUW31_13400;Name=PUW31_13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13400 CP118128.1 Protein Homology CDS 2738599 2739054 . - 0 ID=cds-WJH07300.1;Parent=gene-PUW31_13400;Dbxref=NCBI_GP:WJH07300.1;Name=WJH07300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461590.1;locus_tag=PUW31_13400;product=DUF4385 domain-containing protein;protein_id=WJH07300.1;transl_table=11 CP118128.1 Genbank gene 2739246 2739361 . - . ID=gene-PUW31_13405;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW31_13405 CP118128.1 cmsearch rRNA 2739246 2739361 . - . ID=rna-PUW31_13405;Parent=gene-PUW31_13405;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_13405;product=5S ribosomal RNA CP118128.1 cmsearch exon 2739246 2739361 . - . ID=exon-PUW31_13405-1;Parent=rna-PUW31_13405;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_13405;product=5S ribosomal RNA CP118128.1 Genbank gene 2739558 2742546 . - . ID=gene-PUW31_13410;Name=PUW31_13410;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW31_13410 CP118128.1 cmsearch rRNA 2739558 2742546 . - . ID=rna-PUW31_13410;Parent=gene-PUW31_13410;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_13410;product=23S ribosomal RNA CP118128.1 cmsearch exon 2739558 2742546 . - . ID=exon-PUW31_13410-1;Parent=rna-PUW31_13410;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_13410;product=23S ribosomal RNA CP118128.1 Genbank gene 2742740 2742815 . - . ID=gene-PUW31_13415;Name=PUW31_13415;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_13415 CP118128.1 tRNAscan-SE tRNA 2742740 2742815 . - . ID=rna-PUW31_13415;Parent=gene-PUW31_13415;anticodon=(pos:complement(2742779..2742781));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_13415;product=tRNA-Glu CP118128.1 tRNAscan-SE exon 2742740 2742815 . - . ID=exon-PUW31_13415-1;Parent=rna-PUW31_13415;anticodon=(pos:complement(2742779..2742781));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_13415;product=tRNA-Glu CP118128.1 Genbank gene 2742901 2744442 . - . ID=gene-PUW31_13420;Name=PUW31_13420;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW31_13420 CP118128.1 cmsearch rRNA 2742901 2744442 . - . ID=rna-PUW31_13420;Parent=gene-PUW31_13420;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_13420;product=16S ribosomal RNA CP118128.1 cmsearch exon 2742901 2744442 . - . ID=exon-PUW31_13420-1;Parent=rna-PUW31_13420;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_13420;product=16S ribosomal RNA CP118128.1 Genbank gene 2744895 2747468 . - . ID=gene-PUW31_13425;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=PUW31_13425 CP118128.1 Protein Homology CDS 2744895 2747468 . - 0 ID=cds-WJH07301.1;Parent=gene-PUW31_13425;Dbxref=NCBI_GP:WJH07301.1;Name=WJH07301.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=PUW31_13425;product=ATP-dependent chaperone ClpB;protein_id=WJH07301.1;transl_table=11 CP118128.1 Genbank gene 2747598 2748329 . - . ID=gene-PUW31_13430;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=PUW31_13430 CP118128.1 Protein Homology CDS 2747598 2748329 . - 0 ID=cds-WJH07302.1;Parent=gene-PUW31_13430;Dbxref=NCBI_GP:WJH07302.1;Name=WJH07302.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461592.1;locus_tag=PUW31_13430;product=purine nucleoside phosphorylase YfiH;protein_id=WJH07302.1;transl_table=11 CP118128.1 Genbank pseudogene 2748326 2749305 . - . ID=gene-PUW31_13435;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=pseudogene;locus_tag=PUW31_13435;pseudo=true CP118128.1 Protein Homology CDS 2748326 2749305 . - 0 ID=cds-PUW31_13435;Parent=gene-PUW31_13435;Note=frameshifted;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=PUW31_13435;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2749437 2750174 . + . ID=gene-PUW31_13440;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=PUW31_13440 CP118128.1 Protein Homology CDS 2749437 2750174 . + 0 ID=cds-WJH07303.1;Parent=gene-PUW31_13440;Dbxref=NCBI_GP:WJH07303.1;Name=WJH07303.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461594.1;locus_tag=PUW31_13440;product=outer membrane protein assembly factor BamD;protein_id=WJH07303.1;transl_table=11 CP118128.1 Genbank gene 2750446 2750784 . + . ID=gene-PUW31_13445;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=PUW31_13445 CP118128.1 Protein Homology CDS 2750446 2750784 . + 0 ID=cds-WJH07304.1;Parent=gene-PUW31_13445;Dbxref=NCBI_GP:WJH07304.1;Name=WJH07304.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461595.1;locus_tag=PUW31_13445;product=ribosome-associated translation inhibitor RaiA;protein_id=WJH07304.1;transl_table=11 CP118128.1 cmsearch sequence_feature 2750887 2751012 . + . ID=id-CP118128.1:2750887..2751012;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 CP118128.1 Genbank gene 2750888 2750935 . + . ID=gene-PUW31_13450;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=PUW31_13450 CP118128.1 Protein Homology CDS 2750888 2750935 . + 0 ID=cds-WJH10744.1;Parent=gene-PUW31_13450;Dbxref=NCBI_GP:WJH10744.1;Name=WJH10744.1;gbkey=CDS;gene=pheL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449055.1;locus_tag=PUW31_13450;product=pheA operon leader peptide PheL;protein_id=WJH10744.1;transl_table=11 CP118128.1 Genbank gene 2751035 2752195 . + . ID=gene-PUW31_13455;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=PUW31_13455 CP118128.1 Protein Homology CDS 2751035 2752195 . + 0 ID=cds-WJH07305.1;Parent=gene-PUW31_13455;Dbxref=NCBI_GP:WJH07305.1;Name=WJH07305.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461597.1;locus_tag=PUW31_13455;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WJH07305.1;transl_table=11 CP118128.1 Genbank gene 2752156 2753064 . - . ID=gene-PUW31_13460;Name=PUW31_13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13460 CP118128.1 Protein Homology CDS 2752156 2753064 . - 0 ID=cds-WJH07306.1;Parent=gene-PUW31_13460;Dbxref=NCBI_GP:WJH07306.1;Name=WJH07306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461598.1;locus_tag=PUW31_13460;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WJH07306.1;transl_table=11 CP118128.1 Genbank gene 2753122 2754243 . - . ID=gene-PUW31_13465;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=PUW31_13465 CP118128.1 Protein Homology CDS 2753122 2754243 . - 0 ID=cds-WJH07307.1;Parent=gene-PUW31_13465;Dbxref=NCBI_GP:WJH07307.1;Name=WJH07307.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461599.1;locus_tag=PUW31_13465;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WJH07307.1;transl_table=11 CP118128.1 Genbank gene 2754253 2755323 . - . ID=gene-PUW31_13470;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=PUW31_13470 CP118128.1 Protein Homology CDS 2754253 2755323 . - 0 ID=cds-WJH07308.1;Parent=gene-PUW31_13470;Dbxref=NCBI_GP:WJH07308.1;Name=WJH07308.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461600.1;locus_tag=PUW31_13470;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WJH07308.1;transl_table=11 CP118128.1 Genbank gene 2755762 2756280 . + . ID=gene-PUW31_13475;Name=PUW31_13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13475 CP118128.1 Protein Homology CDS 2755762 2756280 . + 0 ID=cds-WJH07309.1;Parent=gene-PUW31_13475;Dbxref=NCBI_GP:WJH07309.1;Name=WJH07309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461601.1;locus_tag=PUW31_13475;product=YfiR family protein;protein_id=WJH07309.1;transl_table=11 CP118128.1 Genbank gene 2756273 2757493 . + . ID=gene-PUW31_13480;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=PUW31_13480 CP118128.1 Protein Homology CDS 2756273 2757493 . + 0 ID=cds-WJH07310.1;Parent=gene-PUW31_13480;Dbxref=NCBI_GP:WJH07310.1;Name=WJH07310.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461602.1;locus_tag=PUW31_13480;product=diguanylate cyclase DgcN;protein_id=WJH07310.1;transl_table=11 CP118128.1 Genbank gene 2757650 2757997 . - . ID=gene-PUW31_13485;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=PUW31_13485 CP118128.1 Protein Homology CDS 2757650 2757997 . - 0 ID=cds-WJH07311.1;Parent=gene-PUW31_13485;Dbxref=NCBI_GP:WJH07311.1;Name=WJH07311.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=PUW31_13485;product=50S ribosomal protein L19;protein_id=WJH07311.1;transl_table=11 CP118128.1 Genbank gene 2758038 2758805 . - . ID=gene-PUW31_13490;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=PUW31_13490 CP118128.1 Protein Homology CDS 2758038 2758805 . - 0 ID=cds-WJH07312.1;Parent=gene-PUW31_13490;Dbxref=NCBI_GP:WJH07312.1;Name=WJH07312.1;Ontology_term=GO:0006400,GO:0009019;gbkey=CDS;gene=trmD;go_function=tRNA (guanine-N1-)-methyltransferase activity|0009019||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461604.1;locus_tag=PUW31_13490;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WJH07312.1;transl_table=11 CP118128.1 Genbank gene 2758850 2759398 . - . ID=gene-PUW31_13495;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=PUW31_13495 CP118128.1 Protein Homology CDS 2758850 2759398 . - 0 ID=cds-WJH10745.1;Parent=gene-PUW31_13495;Dbxref=NCBI_GP:WJH10745.1;Name=WJH10745.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=PUW31_13495;product=ribosome maturation factor RimM;protein_id=WJH10745.1;transl_table=11 CP118128.1 Genbank gene 2759417 2759665 . - . ID=gene-PUW31_13500;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=PUW31_13500 CP118128.1 Protein Homology CDS 2759417 2759665 . - 0 ID=cds-WJH07313.1;Parent=gene-PUW31_13500;Dbxref=NCBI_GP:WJH07313.1;Name=WJH07313.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=PUW31_13500;product=30S ribosomal protein S16;protein_id=WJH07313.1;transl_table=11 CP118128.1 Genbank gene 2759918 2761279 . - . ID=gene-PUW31_13505;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=PUW31_13505 CP118128.1 Protein Homology CDS 2759918 2761279 . - 0 ID=cds-WJH07314.1;Parent=gene-PUW31_13505;Dbxref=NCBI_GP:WJH07314.1;Name=WJH07314.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=PUW31_13505;product=signal recognition particle protein;protein_id=WJH07314.1;transl_table=11 CP118128.1 Genbank gene 2761445 2762236 . + . ID=gene-PUW31_13510;Name=PUW31_13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13510 CP118128.1 Protein Homology CDS 2761445 2762236 . + 0 ID=cds-WJH07315.1;Parent=gene-PUW31_13510;Dbxref=NCBI_GP:WJH07315.1;Name=WJH07315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461608.1;locus_tag=PUW31_13510;product=inner membrane protein YpjD;protein_id=WJH07315.1;transl_table=11 CP118128.1 Genbank gene 2762256 2763542 . + . ID=gene-PUW31_13515;Name=PUW31_13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13515 CP118128.1 Protein Homology CDS 2762256 2763542 . + 0 ID=cds-WJH10746.1;Parent=gene-PUW31_13515;Dbxref=NCBI_GP:WJH10746.1;Name=WJH10746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=PUW31_13515;product=HlyC/CorC family transporter;protein_id=WJH10746.1;transl_table=11 CP118128.1 Genbank gene 2763663 2764268 . + . ID=gene-PUW31_13520;Name=PUW31_13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13520 CP118128.1 Protein Homology CDS 2763663 2764268 . + 0 ID=cds-WJH07316.1;Parent=gene-PUW31_13520;Dbxref=NCBI_GP:WJH07316.1;Name=WJH07316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461610.1;locus_tag=PUW31_13520;product=cytoplasmic protein;protein_id=WJH07316.1;transl_table=11 CP118128.1 Genbank gene 2764303 2764893 . - . ID=gene-PUW31_13525;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=PUW31_13525 CP118128.1 Protein Homology CDS 2764303 2764893 . - 0 ID=cds-WJH07317.1;Parent=gene-PUW31_13525;Dbxref=NCBI_GP:WJH07317.1;Name=WJH07317.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461611.1;locus_tag=PUW31_13525;product=nucleotide exchange factor GrpE;protein_id=WJH07317.1;transl_table=11 CP118128.1 Genbank pseudogene 2765017 2765894 . + . ID=gene-PUW31_13530;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=pseudogene;locus_tag=PUW31_13530;pseudo=true CP118128.1 Protein Homology CDS 2765017 2765894 . + 0 ID=cds-PUW31_13530;Parent=gene-PUW31_13530;Note=frameshifted;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: protein motif:HMM:NF039482.1;locus_tag=PUW31_13530;product=NAD(+) kinase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2765980 2767641 . + . ID=gene-PUW31_13535;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=PUW31_13535 CP118128.1 Protein Homology CDS 2765980 2767641 . + 0 ID=cds-WJH07318.1;Parent=gene-PUW31_13535;Dbxref=NCBI_GP:WJH07318.1;Name=WJH07318.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461614.1;locus_tag=PUW31_13535;product=DNA repair protein RecN;protein_id=WJH07318.1;transl_table=11 CP118128.1 Genbank gene 2767790 2768128 . + . ID=gene-PUW31_13540;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=PUW31_13540 CP118128.1 Protein Homology CDS 2767790 2768128 . + 0 ID=cds-WJH07319.1;Parent=gene-PUW31_13540;Dbxref=NCBI_GP:WJH07319.1;Name=WJH07319.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461615.1;locus_tag=PUW31_13540;product=outer membrane protein assembly factor BamE;protein_id=WJH07319.1;transl_table=11 CP118128.1 Genbank gene 2768293 2768583 . - . ID=gene-PUW31_13545;Name=PUW31_13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13545 CP118128.1 Protein Homology CDS 2768293 2768583 . - 0 ID=cds-WJH07320.1;Parent=gene-PUW31_13545;Dbxref=NCBI_GP:WJH07320.1;Name=WJH07320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461616.1;locus_tag=PUW31_13545;product=RnfH family protein;protein_id=WJH07320.1;transl_table=11 CP118128.1 Genbank gene 2768573 2769010 . - . ID=gene-PUW31_13550;Name=PUW31_13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13550 CP118128.1 Protein Homology CDS 2768573 2769010 . - 0 ID=cds-WJH07321.1;Parent=gene-PUW31_13550;Dbxref=NCBI_GP:WJH07321.1;Name=WJH07321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543334.1;locus_tag=PUW31_13550;product=type II toxin-antitoxin system RatA family toxin;protein_id=WJH07321.1;transl_table=11 CP118128.1 Genbank gene 2769199 2769681 . + . ID=gene-PUW31_13555;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=PUW31_13555 CP118128.1 Protein Homology CDS 2769199 2769681 . + 0 ID=cds-WJH07322.1;Parent=gene-PUW31_13555;Dbxref=NCBI_GP:WJH07322.1;Name=WJH07322.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461618.1;locus_tag=PUW31_13555;product=SsrA-binding protein SmpB;protein_id=WJH07322.1;transl_table=11 CP118128.1 Genbank pseudogene 2770295 2781752 . + . ID=gene-PUW31_13560;Name=bapA;gbkey=Gene;gene=bapA;gene_biotype=pseudogene;locus_tag=PUW31_13560;pseudo=true CP118128.1 Protein Homology CDS 2770295 2781752 . + 0 ID=cds-PUW31_13560;Parent=gene-PUW31_13560;Note=frameshifted%3B internal stop;gbkey=CDS;gene=bapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237670.1;locus_tag=PUW31_13560;product=biofilm-associated protein BapA;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2781817 2783226 . + . ID=gene-PUW31_13565;Name=PUW31_13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13565 CP118128.1 Protein Homology CDS 2781817 2783226 . + 0 ID=cds-WJH07323.1;Parent=gene-PUW31_13565;Dbxref=NCBI_GP:WJH07323.1;Name=WJH07323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461619.1;locus_tag=PUW31_13565;product=TolC family outer membrane protein;protein_id=WJH07323.1;transl_table=11 CP118128.1 Genbank pseudogene 2783223 2785402 . + . ID=gene-PUW31_13570;Name=PUW31_13570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_13570;pseudo=true CP118128.1 Protein Homology CDS 2783223 2785402 . + 0 ID=cds-PUW31_13570;Parent=gene-PUW31_13570;Note=frameshifted;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461620.1;locus_tag=PUW31_13570;product=type I secretion system permease/ATPase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2785410 2786573 . + . ID=gene-PUW31_13575;Name=PUW31_13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13575 CP118128.1 Protein Homology CDS 2785410 2786573 . + 0 ID=cds-WJH10747.1;Parent=gene-PUW31_13575;Dbxref=NCBI_GP:WJH10747.1;Name=WJH10747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461621.1;locus_tag=PUW31_13575;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WJH10747.1;transl_table=11 CP118128.1 Genbank gene 2786645 2787007 . + . ID=gene-PUW31_13580;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=PUW31_13580 CP118128.1 cmsearch tmRNA 2786645 2787007 . + . ID=rna-PUW31_13580;Parent=gene-PUW31_13580;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_13580;product=transfer-messenger RNA CP118128.1 cmsearch exon 2786645 2787007 . + . ID=exon-PUW31_13580-1;Parent=rna-PUW31_13580;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_13580;product=transfer-messenger RNA CP118128.1 Genbank gene 2787105 2787698 . + . ID=gene-PUW31_13585;Name=PUW31_13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13585 CP118128.1 Protein Homology CDS 2787105 2787698 . + 0 ID=cds-WJH07324.1;Parent=gene-PUW31_13585;Dbxref=NCBI_GP:WJH07324.1;Name=WJH07324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001142974.1;locus_tag=PUW31_13585;product=hypothetical protein;protein_id=WJH07324.1;transl_table=11 CP118128.1 Genbank gene 2788096 2788899 . + . ID=gene-PUW31_13590;Name=PUW31_13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13590 CP118128.1 Protein Homology CDS 2788096 2788899 . + 0 ID=cds-WJH07325.1;Parent=gene-PUW31_13590;Dbxref=NCBI_GP:WJH07325.1;Name=WJH07325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000445378.1;locus_tag=PUW31_13590;product=DUF3800 domain-containing protein;protein_id=WJH07325.1;transl_table=11 CP118128.1 Genbank pseudogene 2789596 2789679 . + . ID=gene-PUW31_13595;Name=PUW31_13595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_13595;pseudo=true CP118128.1 Protein Homology CDS 2789596 2789679 . + 0 ID=cds-PUW31_13595;Parent=gene-PUW31_13595;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=PUW31_13595;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2789695 2790806 . - . ID=gene-PUW31_13600;Name=PUW31_13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13600 CP118128.1 Protein Homology CDS 2790545 2790806 . - 0 ID=cds-WJH07326.1;Parent=gene-PUW31_13600;Dbxref=NCBI_GP:WJH07326.1;Name=WJH07326.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539895.1;locus_tag=PUW31_13600;product=IS3-like element IS1351 family transposase;protein_id=WJH07326.1;transl_table=11 CP118128.1 Protein Homology CDS 2789695 2790545 . - 2 ID=cds-WJH07326.1;Parent=gene-PUW31_13600;Dbxref=NCBI_GP:WJH07326.1;Name=WJH07326.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539895.1;locus_tag=PUW31_13600;product=IS3-like element IS1351 family transposase;protein_id=WJH07326.1;transl_table=11 CP118128.1 Genbank pseudogene 2790882 2791265 . + . ID=gene-PUW31_13605;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=PUW31_13605;pseudo=true CP118128.1 Protein Homology CDS 2790882 2791265 . + 0 ID=cds-PUW31_13605;Parent=gene-PUW31_13605;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=PUW31_13605;product=IS200/IS605-like element IS200F family transposase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2791890 2793005 . + . ID=gene-PUW31_13610;Name=iroB;gbkey=Gene;gene=iroB;gene_biotype=protein_coding;locus_tag=PUW31_13610 CP118128.1 Protein Homology CDS 2791890 2793005 . + 0 ID=cds-WJH07327.1;Parent=gene-PUW31_13610;Dbxref=NCBI_GP:WJH07327.1;Name=WJH07327.1;gbkey=CDS;gene=iroB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461700.1;locus_tag=PUW31_13610;product=salmochelin biosynthesis C-glycosyltransferase IroB;protein_id=WJH07327.1;transl_table=11 CP118128.1 Genbank gene 2793086 2796742 . + . ID=gene-PUW31_13615;Name=iroC;gbkey=Gene;gene=iroC;gene_biotype=protein_coding;locus_tag=PUW31_13615 CP118128.1 Protein Homology CDS 2793086 2796742 . + 0 ID=cds-WJH07328.1;Parent=gene-PUW31_13615;Dbxref=NCBI_GP:WJH07328.1;Name=WJH07328.1;gbkey=CDS;gene=iroC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461701.1;locus_tag=PUW31_13615;product=salmochelin/enterobactin export ABC transporter IroC;protein_id=WJH07328.1;transl_table=11 CP118128.1 Genbank pseudogene 2796852 2798097 . + . ID=gene-PUW31_13620;Name=PUW31_13620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_13620;pseudo=true CP118128.1 Protein Homology CDS 2796852 2798097 . + 0 ID=cds-PUW31_13620;Parent=gene-PUW31_13620;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461702.1;locus_tag=PUW31_13620;product=esterase family protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2798129 2799058 . + . ID=gene-PUW31_13625;Name=PUW31_13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13625 CP118128.1 Protein Homology CDS 2798129 2799058 . + 0 ID=cds-WJH07329.1;Parent=gene-PUW31_13625;Dbxref=NCBI_GP:WJH07329.1;Name=WJH07329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461703.1;locus_tag=PUW31_13625;product=alpha/beta hydrolase;protein_id=WJH07329.1;transl_table=11 CP118128.1 Genbank gene 2799100 2801274 . - . ID=gene-PUW31_13630;Name=PUW31_13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13630 CP118128.1 Protein Homology CDS 2799100 2801274 . - 0 ID=cds-WJH07330.1;Parent=gene-PUW31_13630;Dbxref=NCBI_GP:WJH07330.1;Name=WJH07330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542215.1;locus_tag=PUW31_13630;product=TonB-dependent siderophore receptor;protein_id=WJH07330.1;transl_table=11 CP118128.1 Genbank pseudogene 2801818 2802137 . - . ID=gene-PUW31_13635;Name=PUW31_13635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_13635;pseudo=true CP118128.1 Protein Homology CDS 2801818 2802137 . - 0 ID=cds-PUW31_13635;Parent=gene-PUW31_13635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449164.1;locus_tag=PUW31_13635;product=hypothetical protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2802312 2803364 . - . ID=gene-PUW31_13640;Name=pipB2;gbkey=Gene;gene=pipB2;gene_biotype=pseudogene;locus_tag=PUW31_13640;pseudo=true CP118128.1 Protein Homology CDS 2802312 2803364 . - 0 ID=cds-PUW31_13640;Parent=gene-PUW31_13640;Note=internal stop;gbkey=CDS;gene=pipB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461706.1;locus_tag=PUW31_13640;product=SPI-2 type III secretion system effector PipB2;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2803883 2804811 . + . ID=gene-PUW31_13645;Name=PUW31_13645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_13645;pseudo=true CP118128.1 Protein Homology CDS 2803883 2804811 . + 0 ID=cds-PUW31_13645;Parent=gene-PUW31_13645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461707.1;locus_tag=PUW31_13645;product=VirK family antimicrobial peptide resistance protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2805105 2806000 . + . ID=gene-PUW31_13650;Name=PUW31_13650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_13650;pseudo=true CP118128.1 Protein Homology CDS 2805105 2806000 . + 0 ID=cds-PUW31_13650;Parent=gene-PUW31_13650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461708.1;locus_tag=PUW31_13650;product=antimicrobial resistance protein Mig-14;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2806722 2807735 . - . ID=gene-PUW31_13655;Name=PUW31_13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13655 CP118128.1 Protein Homology CDS 2806722 2807735 . - 0 ID=cds-WJH07331.1;Parent=gene-PUW31_13655;Dbxref=NCBI_GP:WJH07331.1;Name=WJH07331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461709.1;locus_tag=PUW31_13655;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WJH07331.1;transl_table=11 CP118128.1 Genbank gene 2807868 2809283 . - . ID=gene-PUW31_13660;Name=PUW31_13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13660 CP118128.1 Protein Homology CDS 2807868 2809283 . - 0 ID=cds-WJH07332.1;Parent=gene-PUW31_13660;Dbxref=NCBI_GP:WJH07332.1;Name=WJH07332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461710.1;locus_tag=PUW31_13660;product=sensor histidine kinase;protein_id=WJH07332.1;transl_table=11 CP118128.1 Genbank gene 2809270 2809944 . - . ID=gene-PUW31_13665;Name=tctD;gbkey=Gene;gene=tctD;gene_biotype=protein_coding;locus_tag=PUW31_13665 CP118128.1 Protein Homology CDS 2809270 2809944 . - 0 ID=cds-WJH07333.1;Parent=gene-PUW31_13665;Dbxref=NCBI_GP:WJH07333.1;Name=WJH07333.1;gbkey=CDS;gene=tctD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461711.1;locus_tag=PUW31_13665;product=transcriptional regulator TctD;protein_id=WJH07333.1;transl_table=11 CP118128.1 Genbank gene 2810099 2811076 . + . ID=gene-PUW31_13670;Name=PUW31_13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13670 CP118128.1 Protein Homology CDS 2810099 2811076 . + 0 ID=cds-WJH07334.1;Parent=gene-PUW31_13670;Dbxref=NCBI_GP:WJH07334.1;Name=WJH07334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=PUW31_13670;product=tripartite tricarboxylate transporter substrate binding protein;protein_id=WJH07334.1;transl_table=11 CP118128.1 Genbank gene 2811088 2811522 . + . ID=gene-PUW31_13675;Name=PUW31_13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13675 CP118128.1 Protein Homology CDS 2811088 2811522 . + 0 ID=cds-WJH07335.1;Parent=gene-PUW31_13675;Dbxref=NCBI_GP:WJH07335.1;Name=WJH07335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461713.3;locus_tag=PUW31_13675;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WJH07335.1;transl_table=11 CP118128.1 Genbank pseudogene 2811533 2813046 . + . ID=gene-PUW31_13680;Name=PUW31_13680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_13680;pseudo=true CP118128.1 Protein Homology CDS 2811533 2813046 . + 0 ID=cds-PUW31_13680;Parent=gene-PUW31_13680;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461714.1;locus_tag=PUW31_13680;product=tripartite tricarboxylate transporter permease;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2813350 2814327 . + . ID=gene-PUW31_13685;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=PUW31_13685 CP118128.1 Protein Homology CDS 2813350 2814327 . + 0 ID=cds-WJH07336.1;Parent=gene-PUW31_13685;Dbxref=NCBI_GP:WJH07336.1;Name=WJH07336.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417145.4;locus_tag=PUW31_13685;product=glutarate dioxygenase GlaH;protein_id=WJH07336.1;transl_table=11 CP118128.1 Genbank pseudogene 2814353 2815614 . + . ID=gene-PUW31_13690;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=pseudogene;locus_tag=PUW31_13690;pseudo=true CP118128.1 Protein Homology CDS 2814353 2815614 . + 0 ID=cds-PUW31_13690;Parent=gene-PUW31_13690;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461716.1;locus_tag=PUW31_13690;product=L-2-hydroxyglutarate oxidase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2815636 2817084 . + . ID=gene-PUW31_13695;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=PUW31_13695 CP118128.1 Protein Homology CDS 2815636 2817084 . + 0 ID=cds-WJH07337.1;Parent=gene-PUW31_13695;Dbxref=NCBI_GP:WJH07337.1;Name=WJH07337.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461717.1;locus_tag=PUW31_13695;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WJH07337.1;transl_table=11 CP118128.1 Genbank pseudogene 2817099 2818378 . + . ID=gene-PUW31_13700;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=pseudogene;locus_tag=PUW31_13700;pseudo=true CP118128.1 Protein Homology CDS 2817099 2818378 . + 0 ID=cds-PUW31_13700;Parent=gene-PUW31_13700;Note=frameshifted;Ontology_term=GO:0009448,GO:0003867,GO:0030170;gbkey=CDS;gene=gabT;go_function=4-aminobutyrate transaminase activity|0003867||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461718.1;locus_tag=PUW31_13700;product=4-aminobutyrate--2-oxoglutarate transaminase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2818508 2819907 . + . ID=gene-PUW31_13705;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=pseudogene;locus_tag=PUW31_13705;pseudo=true CP118128.1 Protein Homology CDS 2818508 2819907 . + 0 ID=cds-PUW31_13705;Parent=gene-PUW31_13705;Note=frameshifted;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461719.1;locus_tag=PUW31_13705;product=GABA permease;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2819949 2820626 . + . ID=gene-PUW31_13710;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=PUW31_13710 CP118128.1 Protein Homology CDS 2819949 2820626 . + 0 ID=cds-WJH07338.1;Parent=gene-PUW31_13710;Dbxref=NCBI_GP:WJH07338.1;Name=WJH07338.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461720.1;locus_tag=PUW31_13710;product=DNA-binding transcriptional regulator CsiR;protein_id=WJH07338.1;transl_table=11 CP118128.1 Genbank gene 2820648 2821097 . - . ID=gene-PUW31_13715;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=PUW31_13715 CP118128.1 Protein Homology CDS 2820648 2821097 . - 0 ID=cds-WJH07339.1;Parent=gene-PUW31_13715;Dbxref=NCBI_GP:WJH07339.1;Name=WJH07339.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461721.1;locus_tag=PUW31_13715;product=peptidoglycan-binding protein LysM;protein_id=WJH07339.1;transl_table=11 CP118128.1 Genbank gene 2821197 2821355 . - . ID=gene-PUW31_13720;Name=PUW31_13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13720 CP118128.1 Protein Homology CDS 2821197 2821355 . - 0 ID=cds-WJH07340.1;Parent=gene-PUW31_13720;Dbxref=NCBI_GP:WJH07340.1;Name=WJH07340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461722.1;locus_tag=PUW31_13720;product=YqaE/Pmp3 family membrane protein;protein_id=WJH07340.1;transl_table=11 CP118128.1 Genbank gene 2821538 2821837 . + . ID=gene-PUW31_13725;Name=PUW31_13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13725 CP118128.1 Protein Homology CDS 2821538 2821837 . + 0 ID=cds-WJH07341.1;Parent=gene-PUW31_13725;Dbxref=NCBI_GP:WJH07341.1;Name=WJH07341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461723.1;locus_tag=PUW31_13725;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WJH07341.1;transl_table=11 CP118128.1 Genbank gene 2821847 2822374 . + . ID=gene-PUW31_13730;Name=PUW31_13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13730 CP118128.1 Protein Homology CDS 2821847 2822374 . + 0 ID=cds-WJH07342.1;Parent=gene-PUW31_13730;Dbxref=NCBI_GP:WJH07342.1;Name=WJH07342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461724.1;locus_tag=PUW31_13730;product=rhodanese family protein;protein_id=WJH07342.1;transl_table=11 CP118128.1 Genbank gene 2822453 2822632 . + . ID=gene-PUW31_13735;Name=PUW31_13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13735 CP118128.1 Protein Homology CDS 2822453 2822632 . + 0 ID=cds-WJH07343.1;Parent=gene-PUW31_13735;Dbxref=NCBI_GP:WJH07343.1;Name=WJH07343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494935.1;locus_tag=PUW31_13735;product=hypothetical protein;protein_id=WJH07343.1;transl_table=11 CP118128.1 Genbank pseudogene 2822722 2823123 . - . ID=gene-PUW31_13740;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=pseudogene;locus_tag=PUW31_13740;pseudo=true CP118128.1 Protein Homology CDS 2822722 2823123 . - 0 ID=cds-PUW31_13740;Parent=gene-PUW31_13740;Note=internal stop;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461725.1;locus_tag=PUW31_13740;product=DNA-binding protein StpA;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2823821 2824270 . + . ID=gene-PUW31_13745;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=PUW31_13745 CP118128.1 Protein Homology CDS 2823821 2824270 . + 0 ID=cds-WJH07344.1;Parent=gene-PUW31_13745;Dbxref=NCBI_GP:WJH07344.1;Name=WJH07344.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461726.1;locus_tag=PUW31_13745;product=L-alanine exporter AlaE;protein_id=WJH07344.1;transl_table=11 CP118128.1 Genbank pseudogene 2824313 2824654 . - . ID=gene-PUW31_13750;Name=PUW31_13750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_13750;pseudo=true CP118128.1 Protein Homology CDS 2824313 2824654 . - 0 ID=cds-PUW31_13750;Parent=gene-PUW31_13750;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461727.1;locus_tag=PUW31_13750;product=DUF2002 family protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2824816 2825142 . + . ID=gene-PUW31_13755;Name=PUW31_13755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_13755;pseudo=true CP118128.1 Protein Homology CDS 2824816 2825142 . + 0 ID=cds-PUW31_13755;Parent=gene-PUW31_13755;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002914293.1;locus_tag=PUW31_13755;product=DUF883 domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2825226 2826560 . - . ID=gene-PUW31_13760;Name=PUW31_13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13760 CP118128.1 Protein Homology CDS 2825226 2826560 . - 0 ID=cds-WJH07345.1;Parent=gene-PUW31_13760;Dbxref=NCBI_GP:WJH07345.1;Name=WJH07345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=PUW31_13760;product=PLP-dependent aminotransferase family protein;protein_id=WJH07345.1;transl_table=11 CP118128.1 Genbank gene 2826649 2827080 . + . ID=gene-PUW31_13765;Name=PUW31_13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13765 CP118128.1 Protein Homology CDS 2826649 2827080 . + 0 ID=cds-WJH10748.1;Parent=gene-PUW31_13765;Dbxref=NCBI_GP:WJH10748.1;Name=WJH10748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461730.1;locus_tag=PUW31_13765;product=carboxymuconolactone decarboxylase family protein;protein_id=WJH10748.1;transl_table=11 CP118128.1 Genbank gene 2827352 2827597 . + . ID=gene-PUW31_13770;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=PUW31_13770 CP118128.1 Protein Homology CDS 2827352 2827597 . + 0 ID=cds-WJH07346.1;Parent=gene-PUW31_13770;Dbxref=NCBI_GP:WJH07346.1;Name=WJH07346.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461731.1;locus_tag=PUW31_13770;product=glutaredoxin-like protein NrdH;protein_id=WJH07346.1;transl_table=11 CP118128.1 Genbank gene 2827594 2828001 . + . ID=gene-PUW31_13775;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=PUW31_13775 CP118128.1 Protein Homology CDS 2827594 2828001 . + 0 ID=cds-WJH07347.1;Parent=gene-PUW31_13775;Dbxref=NCBI_GP:WJH07347.1;Name=WJH07347.1;Ontology_term=GO:0009263;gbkey=CDS;gene=nrdI;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461732.1;locus_tag=PUW31_13775;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WJH07347.1;transl_table=11 CP118128.1 Genbank gene 2827974 2830118 . + . ID=gene-PUW31_13780;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=PUW31_13780 CP118128.1 Protein Homology CDS 2827974 2830118 . + 0 ID=cds-WJH07348.1;Parent=gene-PUW31_13780;Dbxref=NCBI_GP:WJH07348.1;Name=WJH07348.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461733.1;locus_tag=PUW31_13780;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WJH07348.1;transl_table=11 CP118128.1 Genbank gene 2830129 2831088 . + . ID=gene-PUW31_13785;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=PUW31_13785 CP118128.1 Protein Homology CDS 2830129 2831088 . + 0 ID=cds-WJH07349.1;Parent=gene-PUW31_13785;Dbxref=NCBI_GP:WJH07349.1;Name=WJH07349.1;Ontology_term=GO:0009265,GO:0004748,GO:0030145,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,manganese ion binding|0030145||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461734.1;locus_tag=PUW31_13785;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WJH07349.1;transl_table=11 CP118128.1 Genbank gene 2831443 2832645 . + . ID=gene-PUW31_13790;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=PUW31_13790 CP118128.1 Protein Homology CDS 2831443 2832645 . + 0 ID=cds-WJH07350.1;Parent=gene-PUW31_13790;Dbxref=NCBI_GP:WJH07350.1;Name=WJH07350.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=PUW31_13790;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WJH07350.1;transl_table=11 CP118128.1 Genbank gene 2832638 2833702 . + . ID=gene-PUW31_13795;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=PUW31_13795 CP118128.1 Protein Homology CDS 2832638 2833702 . + 0 ID=cds-WJH07351.1;Parent=gene-PUW31_13795;Dbxref=NCBI_GP:WJH07351.1;Name=WJH07351.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461736.1;locus_tag=PUW31_13795;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WJH07351.1;transl_table=11 CP118128.1 Genbank gene 2833772 2834767 . + . ID=gene-PUW31_13800;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=PUW31_13800 CP118128.1 Protein Homology CDS 2833772 2834767 . + 0 ID=cds-WJH07352.1;Parent=gene-PUW31_13800;Dbxref=NCBI_GP:WJH07352.1;Name=WJH07352.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461737.1;locus_tag=PUW31_13800;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WJH07352.1;transl_table=11 CP118128.1 Genbank gene 2834932 2836116 . + . ID=gene-PUW31_13805;Name=PUW31_13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13805 CP118128.1 Protein Homology CDS 2834932 2836116 . + 0 ID=cds-WJH07353.1;Parent=gene-PUW31_13805;Dbxref=NCBI_GP:WJH07353.1;Name=WJH07353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461738.1;locus_tag=PUW31_13805;product=MFS transporter;protein_id=WJH07353.1;transl_table=11 CP118128.1 Genbank gene 2836613 2837143 . + . ID=gene-PUW31_13810;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=PUW31_13810 CP118128.1 Protein Homology CDS 2836613 2837143 . + 0 ID=cds-WJH07354.1;Parent=gene-PUW31_13810;Dbxref=NCBI_GP:WJH07354.1;Name=WJH07354.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461739.1;locus_tag=PUW31_13810;product=transcriptional repressor MprA;protein_id=WJH07354.1;transl_table=11 CP118128.1 Genbank gene 2837270 2838442 . + . ID=gene-PUW31_13815;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=PUW31_13815 CP118128.1 Protein Homology CDS 2837270 2838442 . + 0 ID=cds-WJH07355.1;Parent=gene-PUW31_13815;Dbxref=NCBI_GP:WJH07355.1;Name=WJH07355.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461740.1;locus_tag=PUW31_13815;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WJH07355.1;transl_table=11 CP118128.1 Genbank pseudogene 2838459 2839996 . + . ID=gene-PUW31_13820;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=pseudogene;locus_tag=PUW31_13820;pseudo=true CP118128.1 Protein Homology CDS 2838459 2839996 . + 0 ID=cds-PUW31_13820;Parent=gene-PUW31_13820;Note=frameshifted;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461741.1;locus_tag=PUW31_13820;product=multidrug efflux MFS transporter permease subunit EmrB;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2840045 2841415 . - . ID=gene-PUW31_13825;Name=PUW31_13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13825 CP118128.1 Protein Homology CDS 2840045 2841415 . - 0 ID=cds-WJH07356.1;Parent=gene-PUW31_13825;Dbxref=NCBI_GP:WJH07356.1;Name=WJH07356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461742.1;locus_tag=PUW31_13825;product=carbohydrate porin;protein_id=WJH07356.1;transl_table=11 CP118128.1 Genbank gene 2841760 2842275 . - . ID=gene-PUW31_13830;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=PUW31_13830 CP118128.1 Protein Homology CDS 2841760 2842275 . - 0 ID=cds-WJH07357.1;Parent=gene-PUW31_13830;Dbxref=NCBI_GP:WJH07357.1;Name=WJH07357.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=PUW31_13830;product=S-ribosylhomocysteine lyase;protein_id=WJH07357.1;transl_table=11 CP118128.1 Genbank gene 2842425 2843981 . - . ID=gene-PUW31_13835;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=PUW31_13835 CP118128.1 Protein Homology CDS 2842425 2843981 . - 0 ID=cds-WJH07358.1;Parent=gene-PUW31_13835;Dbxref=NCBI_GP:WJH07358.1;Name=WJH07358.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461744.1;locus_tag=PUW31_13835;product=glutamate--cysteine ligase;protein_id=WJH07358.1;transl_table=11 CP118128.1 Genbank gene 2844058 2844483 . - . ID=gene-PUW31_13840;Name=PUW31_13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13840 CP118128.1 Protein Homology CDS 2844058 2844483 . - 0 ID=cds-WJH07359.1;Parent=gene-PUW31_13840;Dbxref=NCBI_GP:WJH07359.1;Name=WJH07359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461745.1;locus_tag=PUW31_13840;product=DedA family protein;protein_id=WJH07359.1;transl_table=11 CP118128.1 Genbank pseudogene 2844480 2845045 . - . ID=gene-PUW31_13845;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=pseudogene;locus_tag=PUW31_13845;pseudo=true CP118128.1 Protein Homology CDS 2844480 2845045 . - 0 ID=cds-PUW31_13845;Parent=gene-PUW31_13845;Note=frameshifted;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461746.1;locus_tag=PUW31_13845;product=fructose-1-phosphate/6-phosphogluconate phosphatase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2845282 2845358 . - . ID=gene-PUW31_13850;Name=PUW31_13850;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_13850 CP118128.1 tRNAscan-SE tRNA 2845282 2845358 . - . ID=rna-PUW31_13850;Parent=gene-PUW31_13850;anticodon=(pos:complement(2845322..2845324));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_13850;product=tRNA-Arg CP118128.1 tRNAscan-SE exon 2845282 2845358 . - . ID=exon-PUW31_13850-1;Parent=rna-PUW31_13850;anticodon=(pos:complement(2845322..2845324));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_13850;product=tRNA-Arg CP118128.1 Genbank gene 2845552 2845628 . - . ID=gene-PUW31_13855;Name=PUW31_13855;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_13855 CP118128.1 tRNAscan-SE tRNA 2845552 2845628 . - . ID=rna-PUW31_13855;Parent=gene-PUW31_13855;anticodon=(pos:complement(2845592..2845594));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_13855;product=tRNA-Arg CP118128.1 tRNAscan-SE exon 2845552 2845628 . - . ID=exon-PUW31_13855-1;Parent=rna-PUW31_13855;anticodon=(pos:complement(2845592..2845594));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_13855;product=tRNA-Arg CP118128.1 Genbank gene 2845691 2845767 . - . ID=gene-PUW31_13860;Name=PUW31_13860;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_13860 CP118128.1 tRNAscan-SE tRNA 2845691 2845767 . - . ID=rna-PUW31_13860;Parent=gene-PUW31_13860;anticodon=(pos:complement(2845731..2845733));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_13860;product=tRNA-Arg CP118128.1 tRNAscan-SE exon 2845691 2845767 . - . ID=exon-PUW31_13860-1;Parent=rna-PUW31_13860;anticodon=(pos:complement(2845731..2845733));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_13860;product=tRNA-Arg CP118128.1 Genbank gene 2845771 2845863 . - . ID=gene-PUW31_13865;Name=PUW31_13865;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_13865 CP118128.1 tRNAscan-SE tRNA 2845771 2845863 . - . ID=rna-PUW31_13865;Parent=gene-PUW31_13865;anticodon=(pos:complement(2845827..2845829));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_13865;product=tRNA-Ser CP118128.1 tRNAscan-SE exon 2845771 2845863 . - . ID=exon-PUW31_13865-1;Parent=rna-PUW31_13865;anticodon=(pos:complement(2845827..2845829));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_13865;product=tRNA-Ser CP118128.1 Genbank gene 2846167 2846352 . - . ID=gene-PUW31_13870;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=PUW31_13870 CP118128.1 Protein Homology CDS 2846167 2846352 . - 0 ID=cds-WJH07360.1;Parent=gene-PUW31_13870;Dbxref=NCBI_GP:WJH07360.1;Name=WJH07360.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=PUW31_13870;product=carbon storage regulator CsrA;protein_id=WJH07360.1;transl_table=11 CP118128.1 Genbank gene 2846587 2849217 . - . ID=gene-PUW31_13875;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=PUW31_13875 CP118128.1 Protein Homology CDS 2846587 2849217 . - 0 ID=cds-WJH07361.1;Parent=gene-PUW31_13875;Dbxref=NCBI_GP:WJH07361.1;Name=WJH07361.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461748.1;locus_tag=PUW31_13875;product=alanine--tRNA ligase;protein_id=WJH07361.1;transl_table=11 CP118128.1 Genbank gene 2849453 2849953 . - . ID=gene-PUW31_13880;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=PUW31_13880 CP118128.1 Protein Homology CDS 2849453 2849953 . - 0 ID=cds-WJH07362.1;Parent=gene-PUW31_13880;Dbxref=NCBI_GP:WJH07362.1;Name=WJH07362.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461749.1;locus_tag=PUW31_13880;product=recombination regulator RecX;protein_id=WJH07362.1;transl_table=11 CP118128.1 Genbank gene 2850070 2851131 . - . ID=gene-PUW31_13885;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=PUW31_13885 CP118128.1 Protein Homology CDS 2850070 2851131 . - 0 ID=cds-WJH07363.1;Parent=gene-PUW31_13885;Dbxref=NCBI_GP:WJH07363.1;Name=WJH07363.1;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461750.1;locus_tag=PUW31_13885;product=recombinase RecA;protein_id=WJH07363.1;transl_table=11 CP118128.1 Genbank pseudogene 2851216 2851712 . - . ID=gene-PUW31_13890;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=pseudogene;locus_tag=PUW31_13890;pseudo=true CP118128.1 Protein Homology CDS 2851216 2851712 . - 0 ID=cds-PUW31_13890;Parent=gene-PUW31_13890;Note=frameshifted;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461751.1;locus_tag=PUW31_13890;product=nicotinamide-nucleotide amidase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2851908 2852153 . + . ID=gene-PUW31_13895;Name=PUW31_13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13895 CP118128.1 Protein Homology CDS 2851908 2852153 . + 0 ID=cds-WJH07364.1;Parent=gene-PUW31_13895;Dbxref=NCBI_GP:WJH07364.1;Name=WJH07364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053775.1;locus_tag=PUW31_13895;product=hypothetical protein;protein_id=WJH07364.1;transl_table=11 CP118128.1 Genbank gene 2852191 2853270 . - . ID=gene-PUW31_13900;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=PUW31_13900 CP118128.1 Protein Homology CDS 2852191 2853270 . - 0 ID=cds-WJH07365.1;Parent=gene-PUW31_13900;Dbxref=NCBI_GP:WJH07365.1;Name=WJH07365.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461752.1;locus_tag=PUW31_13900;product=lytic murein transglycosylase B;protein_id=WJH07365.1;transl_table=11 CP118128.1 Genbank gene 2853524 2854087 . + . ID=gene-PUW31_13905;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;gene_synonym=gutA;locus_tag=PUW31_13905 CP118128.1 Protein Homology CDS 2853524 2854087 . + 0 ID=cds-WJH07366.1;Parent=gene-PUW31_13905;Dbxref=NCBI_GP:WJH07366.1;Name=WJH07366.1;gbkey=CDS;gene=srlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461753.1;locus_tag=PUW31_13905;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WJH07366.1;transl_table=11 CP118128.1 Genbank gene 2854084 2855055 . + . ID=gene-PUW31_13910;Name=PUW31_13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13910 CP118128.1 Protein Homology CDS 2854084 2855055 . + 0 ID=cds-WJH07367.1;Parent=gene-PUW31_13910;Dbxref=NCBI_GP:WJH07367.1;Name=WJH07367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461754.1;locus_tag=PUW31_13910;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WJH07367.1;transl_table=11 CP118128.1 Genbank gene 2855067 2855429 . + . ID=gene-PUW31_13915;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=PUW31_13915 CP118128.1 Protein Homology CDS 2855067 2855429 . + 0 ID=cds-WJH07368.1;Parent=gene-PUW31_13915;Dbxref=NCBI_GP:WJH07368.1;Name=WJH07368.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461755.1;locus_tag=PUW31_13915;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WJH07368.1;transl_table=11 CP118128.1 Genbank gene 2855441 2856220 . + . ID=gene-PUW31_13920;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=PUW31_13920 CP118128.1 Protein Homology CDS 2855441 2856220 . + 0 ID=cds-WJH07369.1;Parent=gene-PUW31_13920;Dbxref=NCBI_GP:WJH07369.1;Name=WJH07369.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461756.1;locus_tag=PUW31_13920;product=sorbitol-6-phosphate dehydrogenase;protein_id=WJH07369.1;transl_table=11 CP118128.1 Genbank gene 2856297 2856656 . + . ID=gene-PUW31_13925;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=PUW31_13925 CP118128.1 Protein Homology CDS 2856297 2856656 . + 0 ID=cds-WJH07370.1;Parent=gene-PUW31_13925;Dbxref=NCBI_GP:WJH07370.1;Name=WJH07370.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461757.1;locus_tag=PUW31_13925;product=transcriptional regulator GutM;protein_id=WJH07370.1;transl_table=11 CP118128.1 Genbank gene 2856854 2857627 . + . ID=gene-PUW31_13930;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=PUW31_13930 CP118128.1 Protein Homology CDS 2856854 2857627 . + 0 ID=cds-WJH07371.1;Parent=gene-PUW31_13930;Dbxref=NCBI_GP:WJH07371.1;Name=WJH07371.1;gbkey=CDS;gene=srlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461758.1;locus_tag=PUW31_13930;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WJH07371.1;transl_table=11 CP118128.1 Genbank gene 2857620 2858585 . + . ID=gene-PUW31_13935;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=PUW31_13935 CP118128.1 Protein Homology CDS 2857620 2858585 . + 0 ID=cds-WJH07372.1;Parent=gene-PUW31_13935;Dbxref=NCBI_GP:WJH07372.1;Name=WJH07372.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=PUW31_13935;product=arabinose-5-phosphate isomerase GutQ;protein_id=WJH07372.1;transl_table=11 CP118128.1 Genbank gene 2858582 2860102 . - . ID=gene-PUW31_13940;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=PUW31_13940 CP118128.1 Protein Homology CDS 2858582 2860102 . - 0 ID=cds-WJH07373.1;Parent=gene-PUW31_13940;Dbxref=NCBI_GP:WJH07373.1;Name=WJH07373.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461760.1;locus_tag=PUW31_13940;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WJH07373.1;transl_table=11 CP118128.1 Genbank gene 2860288 2861721 . + . ID=gene-PUW31_13945;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=PUW31_13945 CP118128.1 Protein Homology CDS 2860288 2861721 . + 0 ID=cds-WJH07374.1;Parent=gene-PUW31_13945;Dbxref=NCBI_GP:WJH07374.1;Name=WJH07374.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461761.1;locus_tag=PUW31_13945;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WJH07374.1;transl_table=11 CP118128.1 Genbank gene 2861718 2862851 . + . ID=gene-PUW31_13950;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=PUW31_13950 CP118128.1 Protein Homology CDS 2861718 2862851 . + 0 ID=cds-WJH07375.1;Parent=gene-PUW31_13950;Dbxref=NCBI_GP:WJH07375.1;Name=WJH07375.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461762.1;locus_tag=PUW31_13950;product=NADH:flavorubredoxin reductase NorW;protein_id=WJH07375.1;transl_table=11 CP118128.1 Genbank gene 2862948 2865188 . - . ID=gene-PUW31_13955;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=PUW31_13955 CP118128.1 Protein Homology CDS 2862948 2865188 . - 0 ID=cds-WJH07376.1;Parent=gene-PUW31_13955;Dbxref=NCBI_GP:WJH07376.1;Name=WJH07376.1;Ontology_term=GO:0036211,GO:0003998;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461763.1;locus_tag=PUW31_13955;product=carbamoyltransferase HypF;protein_id=WJH07376.1;transl_table=11 CP118128.1 Genbank gene 2865334 2865879 . - . ID=gene-PUW31_13960;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=PUW31_13960 CP118128.1 Protein Homology CDS 2865334 2865879 . - 0 ID=cds-WJH07377.1;Parent=gene-PUW31_13960;Dbxref=NCBI_GP:WJH07377.1;Name=WJH07377.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461764.1;locus_tag=PUW31_13960;product=electron transport protein HydN;protein_id=WJH07377.1;transl_table=11 CP118128.1 Genbank gene 2866080 2866889 . - . ID=gene-PUW31_13965;Name=PUW31_13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13965 CP118128.1 Protein Homology CDS 2866080 2866889 . - 0 ID=cds-WJH07378.1;Parent=gene-PUW31_13965;Dbxref=NCBI_GP:WJH07378.1;Name=WJH07378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461765.1;locus_tag=PUW31_13965;product=hypothetical protein;protein_id=WJH07378.1;transl_table=11 CP118128.1 Genbank gene 2866916 2867386 . - . ID=gene-PUW31_13970;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=PUW31_13970 CP118128.1 Protein Homology CDS 2866916 2867386 . - 0 ID=cds-WJH07379.1;Parent=gene-PUW31_13970;Dbxref=NCBI_GP:WJH07379.1;Name=WJH07379.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461766.1;locus_tag=PUW31_13970;product=hydrogenase maturation peptidase HycI;protein_id=WJH07379.1;transl_table=11 CP118128.1 Genbank gene 2867379 2867789 . - . ID=gene-PUW31_13975;Name=PUW31_13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13975 CP118128.1 Protein Homology CDS 2867379 2867789 . - 0 ID=cds-WJH07380.1;Parent=gene-PUW31_13975;Dbxref=NCBI_GP:WJH07380.1;Name=WJH07380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461767.1;locus_tag=PUW31_13975;product=formate hydrogenlyase maturation HycH family protein;protein_id=WJH07380.1;transl_table=11 CP118128.1 Genbank gene 2867786 2868553 . - . ID=gene-PUW31_13980;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=PUW31_13980 CP118128.1 Protein Homology CDS 2867786 2868553 . - 0 ID=cds-WJH07381.1;Parent=gene-PUW31_13980;Dbxref=NCBI_GP:WJH07381.1;Name=WJH07381.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461768.1;locus_tag=PUW31_13980;product=formate hydrogenlyase subunit HycG;protein_id=WJH07381.1;transl_table=11 CP118128.1 Genbank gene 2868553 2869095 . - . ID=gene-PUW31_13985;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=PUW31_13985 CP118128.1 Protein Homology CDS 2868553 2869095 . - 0 ID=cds-WJH07382.1;Parent=gene-PUW31_13985;Dbxref=NCBI_GP:WJH07382.1;Name=WJH07382.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461769.1;locus_tag=PUW31_13985;product=formate hydrogenlyase subunit HycF;protein_id=WJH07382.1;transl_table=11 CP118128.1 Genbank gene 2869105 2870790 . - . ID=gene-PUW31_13990;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=PUW31_13990 CP118128.1 Protein Homology CDS 2869105 2870790 . - 0 ID=cds-WJH07383.1;Parent=gene-PUW31_13990;Dbxref=NCBI_GP:WJH07383.1;Name=WJH07383.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=PUW31_13990;product=formate hydrogenlyase subunit HycE;protein_id=WJH07383.1;transl_table=11 CP118128.1 Genbank gene 2870808 2871731 . - . ID=gene-PUW31_13995;Name=PUW31_13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_13995 CP118128.1 Protein Homology CDS 2870808 2871731 . - 0 ID=cds-WJH07384.1;Parent=gene-PUW31_13995;Dbxref=NCBI_GP:WJH07384.1;Name=WJH07384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461771.1;locus_tag=PUW31_13995;product=respiratory chain complex I subunit 1 family protein;protein_id=WJH07384.1;transl_table=11 CP118128.1 Genbank gene 2871734 2873560 . - . ID=gene-PUW31_14000;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=PUW31_14000 CP118128.1 Protein Homology CDS 2871734 2873560 . - 0 ID=cds-WJH07385.1;Parent=gene-PUW31_14000;Dbxref=NCBI_GP:WJH07385.1;Name=WJH07385.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461772.2;locus_tag=PUW31_14000;product=formate hydrogenlyase subunit 3;protein_id=WJH07385.1;transl_table=11 CP118128.1 Genbank gene 2873560 2874168 . - . ID=gene-PUW31_14005;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=PUW31_14005 CP118128.1 Protein Homology CDS 2873560 2874168 . - 0 ID=cds-WJH07386.1;Parent=gene-PUW31_14005;Dbxref=NCBI_GP:WJH07386.1;Name=WJH07386.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461773.1;locus_tag=PUW31_14005;product=formate hydrogenlyase subunit HycB;protein_id=WJH07386.1;transl_table=11 CP118128.1 Genbank gene 2874314 2874775 . - . ID=gene-PUW31_14010;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=PUW31_14010 CP118128.1 Protein Homology CDS 2874314 2874775 . - 0 ID=cds-WJH07387.1;Parent=gene-PUW31_14010;Dbxref=NCBI_GP:WJH07387.1;Name=WJH07387.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461774.1;locus_tag=PUW31_14010;product=formate hydrogenlyase regulator HycA;protein_id=WJH07387.1;transl_table=11 CP118128.1 Genbank gene 2874985 2875341 . + . ID=gene-PUW31_14015;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=PUW31_14015 CP118128.1 Protein Homology CDS 2874985 2875341 . + 0 ID=cds-WJH07388.1;Parent=gene-PUW31_14015;Dbxref=NCBI_GP:WJH07388.1;Name=WJH07388.1;Ontology_term=GO:0036211,GO:0008901;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461775.1;locus_tag=PUW31_14015;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WJH07388.1;transl_table=11 CP118128.1 Genbank gene 2875410 2876282 . + . ID=gene-PUW31_14020;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=PUW31_14020 CP118128.1 Protein Homology CDS 2875410 2876282 . + 0 ID=cds-WJH07389.1;Parent=gene-PUW31_14020;Dbxref=NCBI_GP:WJH07389.1;Name=WJH07389.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461776.1;locus_tag=PUW31_14020;product=hydrogenase nickel incorporation protein HypB;protein_id=WJH07389.1;transl_table=11 CP118128.1 Genbank gene 2876273 2876545 . + . ID=gene-PUW31_14025;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=PUW31_14025 CP118128.1 Protein Homology CDS 2876273 2876545 . + 0 ID=cds-WJH07390.1;Parent=gene-PUW31_14025;Dbxref=NCBI_GP:WJH07390.1;Name=WJH07390.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461777.1;locus_tag=PUW31_14025;product=hydrogenase 3 maturation protein HypC;protein_id=WJH07390.1;transl_table=11 CP118128.1 Genbank gene 2876545 2877666 . + . ID=gene-PUW31_14030;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=PUW31_14030 CP118128.1 Protein Homology CDS 2876545 2877666 . + 0 ID=cds-WJH07391.1;Parent=gene-PUW31_14030;Dbxref=NCBI_GP:WJH07391.1;Name=WJH07391.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461778.2;locus_tag=PUW31_14030;product=hydrogenase formation protein HypD;protein_id=WJH07391.1;transl_table=11 CP118128.1 Genbank gene 2877663 2878673 . + . ID=gene-PUW31_14035;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=PUW31_14035 CP118128.1 Protein Homology CDS 2877663 2878673 . + 0 ID=cds-WJH07392.1;Parent=gene-PUW31_14035;Dbxref=NCBI_GP:WJH07392.1;Name=WJH07392.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=PUW31_14035;product=hydrogenase expression/formation protein HypE;protein_id=WJH07392.1;transl_table=11 CP118128.1 Genbank gene 2878892 2880970 . + . ID=gene-PUW31_14040;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=PUW31_14040 CP118128.1 Protein Homology CDS 2878892 2880970 . + 0 ID=cds-WJH07393.1;Parent=gene-PUW31_14040;Dbxref=NCBI_GP:WJH07393.1;Name=WJH07393.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461780.1;locus_tag=PUW31_14040;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WJH07393.1;transl_table=11 CP118128.1 Genbank gene 2881032 2881376 . - . ID=gene-PUW31_14045;Name=PUW31_14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14045 CP118128.1 Protein Homology CDS 2881032 2881376 . - 0 ID=cds-WJH07394.1;Parent=gene-PUW31_14045;Dbxref=NCBI_GP:WJH07394.1;Name=WJH07394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461781.1;locus_tag=PUW31_14045;product=nitrous oxide-stimulated promoter family protein;protein_id=WJH07394.1;transl_table=11 CP118128.1 Genbank gene 2881558 2882475 . + . ID=gene-PUW31_14050;Name=sitA;gbkey=Gene;gene=sitA;gene_biotype=protein_coding;locus_tag=PUW31_14050 CP118128.1 Protein Homology CDS 2881558 2882475 . + 0 ID=cds-WJH07395.1;Parent=gene-PUW31_14050;Dbxref=NCBI_GP:WJH07395.1;Name=WJH07395.1;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461782.1;locus_tag=PUW31_14050;product=iron/manganese ABC transporter substrate-binding protein SitA;protein_id=WJH07395.1;transl_table=11 CP118128.1 Genbank gene 2882472 2883293 . + . ID=gene-PUW31_14055;Name=sitB;gbkey=Gene;gene=sitB;gene_biotype=protein_coding;locus_tag=PUW31_14055 CP118128.1 Protein Homology CDS 2882472 2883293 . + 0 ID=cds-WJH07396.1;Parent=gene-PUW31_14055;Dbxref=NCBI_GP:WJH07396.1;Name=WJH07396.1;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461783.1;locus_tag=PUW31_14055;product=iron/manganese ABC transporter ATP-binding protein SitB;protein_id=WJH07396.1;transl_table=11 CP118128.1 Genbank gene 2883290 2884150 . + . ID=gene-PUW31_14060;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=PUW31_14060 CP118128.1 Protein Homology CDS 2883290 2884150 . + 0 ID=cds-WJH07397.1;Parent=gene-PUW31_14060;Dbxref=NCBI_GP:WJH07397.1;Name=WJH07397.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461784.1;locus_tag=PUW31_14060;product=iron/manganese ABC transporter permease subunit SitC;protein_id=WJH07397.1;transl_table=11 CP118128.1 Genbank gene 2884141 2884989 . + . ID=gene-PUW31_14065;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=protein_coding;locus_tag=PUW31_14065 CP118128.1 Protein Homology CDS 2884141 2884989 . + 0 ID=cds-WJH07398.1;Parent=gene-PUW31_14065;Dbxref=NCBI_GP:WJH07398.1;Name=WJH07398.1;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461785.1;locus_tag=PUW31_14065;product=iron/manganese ABC transporter permease subunit SitD;protein_id=WJH07398.1;transl_table=11 CP118128.1 Genbank gene 2885088 2885996 . - . ID=gene-PUW31_14070;Name=avrA;gbkey=Gene;gene=avrA;gene_biotype=protein_coding;locus_tag=PUW31_14070 CP118128.1 Protein Homology CDS 2885088 2885996 . - 0 ID=cds-WJH07399.1;Parent=gene-PUW31_14070;Dbxref=NCBI_GP:WJH07399.1;Name=WJH07399.1;gbkey=CDS;gene=avrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576330.1;locus_tag=PUW31_14070;product=type III secretion system YopJ family effector AvrA;protein_id=WJH07399.1;transl_table=11 CP118128.1 Genbank gene 2886157 2886912 . - . ID=gene-PUW31_14075;Name=sprB;gbkey=Gene;gene=sprB;gene_biotype=protein_coding;locus_tag=PUW31_14075 CP118128.1 Protein Homology CDS 2886157 2886912 . - 0 ID=cds-WJH07400.1;Parent=gene-PUW31_14075;Dbxref=NCBI_GP:WJH07400.1;Name=WJH07400.1;gbkey=CDS;gene=sprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461787.1;locus_tag=PUW31_14075;product=transcriptional regulator SprB;protein_id=WJH07400.1;transl_table=11 CP118128.1 Genbank gene 2887297 2888184 . - . ID=gene-PUW31_14080;Name=hilC;gbkey=Gene;gene=hilC;gene_biotype=protein_coding;locus_tag=PUW31_14080 CP118128.1 Protein Homology CDS 2887297 2888184 . - 0 ID=cds-WJH07401.1;Parent=gene-PUW31_14080;Dbxref=NCBI_GP:WJH07401.1;Name=WJH07401.1;gbkey=CDS;gene=hilC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461788.1;locus_tag=PUW31_14080;product=invasion transcriptional regulator HilC;protein_id=WJH07401.1;transl_table=11 CP118128.1 Genbank gene 2888529 2888981 . - . ID=gene-PUW31_14085;Name=PUW31_14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14085 CP118128.1 Protein Homology CDS 2888529 2888981 . - 0 ID=cds-WJH10749.1;Parent=gene-PUW31_14085;Dbxref=NCBI_GP:WJH10749.1;Name=WJH10749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461789.1;locus_tag=PUW31_14085;product=type III secretion system effector protein OrgC;protein_id=WJH10749.1;transl_table=11 CP118128.1 Genbank gene 2888978 2889658 . - . ID=gene-PUW31_14090;Name=orgB;gbkey=Gene;gene=orgB;gene_biotype=protein_coding;locus_tag=PUW31_14090 CP118128.1 Protein Homology CDS 2888978 2889658 . - 0 ID=cds-WJH07402.1;Parent=gene-PUW31_14090;Dbxref=NCBI_GP:WJH07402.1;Name=WJH07402.1;gbkey=CDS;gene=orgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461790.1;locus_tag=PUW31_14090;product=type III secretion system linker protein OrgB;protein_id=WJH07402.1;transl_table=11 CP118128.1 Genbank gene 2889615 2890214 . - . ID=gene-PUW31_14095;Name=orgA;gbkey=Gene;gene=orgA;gene_biotype=protein_coding;locus_tag=PUW31_14095 CP118128.1 Protein Homology CDS 2889615 2890214 . - 0 ID=cds-WJH07403.1;Parent=gene-PUW31_14095;Dbxref=NCBI_GP:WJH07403.1;Name=WJH07403.1;gbkey=CDS;gene=orgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461791.1;locus_tag=PUW31_14095;product=oxygen-regulated invasion protein OrgA;protein_id=WJH07403.1;transl_table=11 CP118128.1 Genbank gene 2890186 2890944 . - . ID=gene-PUW31_14100;Name=prgK;gbkey=Gene;gene=prgK;gene_biotype=protein_coding;locus_tag=PUW31_14100 CP118128.1 Protein Homology CDS 2890186 2890944 . - 0 ID=cds-WJH07404.1;Parent=gene-PUW31_14100;Dbxref=NCBI_GP:WJH07404.1;Name=WJH07404.1;gbkey=CDS;gene=prgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461792.1;locus_tag=PUW31_14100;product=type III secretion system inner membrane ring lipoprotein PrgK;protein_id=WJH07404.1;transl_table=11 CP118128.1 Genbank gene 2890941 2891246 . - . ID=gene-PUW31_14105;Name=prgJ;gbkey=Gene;gene=prgJ;gene_biotype=protein_coding;locus_tag=PUW31_14105 CP118128.1 Protein Homology CDS 2890941 2891246 . - 0 ID=cds-WJH07405.1;Parent=gene-PUW31_14105;Dbxref=NCBI_GP:WJH07405.1;Name=WJH07405.1;gbkey=CDS;gene=prgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461793.1;locus_tag=PUW31_14105;product=type III secretion system inner rod protein PrgJ;protein_id=WJH07405.1;transl_table=11 CP118128.1 Genbank gene 2891265 2891507 . - . ID=gene-PUW31_14110;Name=prgI;gbkey=Gene;gene=prgI;gene_biotype=protein_coding;locus_tag=PUW31_14110 CP118128.1 Protein Homology CDS 2891265 2891507 . - 0 ID=cds-WJH07406.1;Parent=gene-PUW31_14110;Dbxref=NCBI_GP:WJH07406.1;Name=WJH07406.1;gbkey=CDS;gene=prgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461794.1;locus_tag=PUW31_14110;product=type III secretion system needle filament protein PrgI;protein_id=WJH07406.1;transl_table=11 CP118128.1 Genbank gene 2891532 2892710 . - . ID=gene-PUW31_14115;Name=prgH;gbkey=Gene;gene=prgH;gene_biotype=protein_coding;locus_tag=PUW31_14115 CP118128.1 Protein Homology CDS 2891532 2892710 . - 0 ID=cds-WJH07407.1;Parent=gene-PUW31_14115;Dbxref=NCBI_GP:WJH07407.1;Name=WJH07407.1;gbkey=CDS;gene=prgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461795.1;locus_tag=PUW31_14115;product=type III secretion system inner membrane ring protein PrgH;protein_id=WJH07407.1;transl_table=11 CP118128.1 Genbank gene 2893025 2893954 . + . ID=gene-PUW31_14120;Name=hilD;gbkey=Gene;gene=hilD;gene_biotype=protein_coding;locus_tag=PUW31_14120 CP118128.1 Protein Homology CDS 2893025 2893954 . + 0 ID=cds-WJH07408.1;Parent=gene-PUW31_14120;Dbxref=NCBI_GP:WJH07408.1;Name=WJH07408.1;gbkey=CDS;gene=hilD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461796.1;locus_tag=PUW31_14120;product=transcriptional regulator HilD;protein_id=WJH07408.1;transl_table=11 CP118128.1 Genbank gene 2895044 2896705 . + . ID=gene-PUW31_14125;Name=hilA;gbkey=Gene;gene=hilA;gene_biotype=protein_coding;locus_tag=PUW31_14125 CP118128.1 Protein Homology CDS 2895044 2896705 . + 0 ID=cds-WJH07409.1;Parent=gene-PUW31_14125;Dbxref=NCBI_GP:WJH07409.1;Name=WJH07409.1;gbkey=CDS;gene=hilA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461797.1;locus_tag=PUW31_14125;product=transcriptional regulator HilA;protein_id=WJH07409.1;transl_table=11 CP118128.1 Genbank pseudogene 2896723 2897204 . + . ID=gene-PUW31_14130;Name=iagB;gbkey=Gene;gene=iagB;gene_biotype=pseudogene;locus_tag=PUW31_14130;pseudo=true CP118128.1 Protein Homology CDS 2896723 2897204 . + 0 ID=cds-PUW31_14130;Parent=gene-PUW31_14130;Note=frameshifted;gbkey=CDS;gene=iagB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461798.1;locus_tag=PUW31_14130;product=SPI-1 type III secretion system invasion protein IagB;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2897258 2898888 . - . ID=gene-PUW31_14135;Name=sptP;gbkey=Gene;gene=sptP;gene_biotype=pseudogene;locus_tag=PUW31_14135;pseudo=true CP118128.1 Protein Homology CDS 2897258 2898888 . - 0 ID=cds-PUW31_14135;Parent=gene-PUW31_14135;Note=frameshifted;gbkey=CDS;gene=sptP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540778.1;locus_tag=PUW31_14135;product=SPI-1 type III secretion system effector GTPase-activating protein SptP;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2898875 2899267 . - . ID=gene-PUW31_14140;Name=sicP;gbkey=Gene;gene=sicP;gene_biotype=protein_coding;locus_tag=PUW31_14140 CP118128.1 Protein Homology CDS 2898875 2899267 . - 0 ID=cds-WJH07410.1;Parent=gene-PUW31_14140;Dbxref=NCBI_GP:WJH07410.1;Name=WJH07410.1;gbkey=CDS;gene=sicP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461800.1;locus_tag=PUW31_14140;product=chaperone SicP;protein_id=WJH07410.1;transl_table=11 CP118128.1 Genbank gene 2899294 2899554 . - . ID=gene-PUW31_14145;Name=PUW31_14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14145 CP118128.1 Protein Homology CDS 2899294 2899554 . - 0 ID=cds-WJH07411.1;Parent=gene-PUW31_14145;Dbxref=NCBI_GP:WJH07411.1;Name=WJH07411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449260.1;locus_tag=PUW31_14145;product=hypothetical protein;protein_id=WJH07411.1;transl_table=11 CP118128.1 Genbank gene 2899598 2899846 . - . ID=gene-PUW31_14150;Name=PUW31_14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14150 CP118128.1 Protein Homology CDS 2899598 2899846 . - 0 ID=cds-WJH07412.1;Parent=gene-PUW31_14150;Dbxref=NCBI_GP:WJH07412.1;Name=WJH07412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461802.1;locus_tag=PUW31_14150;product=acyl carrier protein;protein_id=WJH07412.1;transl_table=11 CP118128.1 Genbank pseudogene 2899865 2901921 . - . ID=gene-PUW31_14155;Name=sipA;gbkey=Gene;gene=sipA;gene_biotype=pseudogene;locus_tag=PUW31_14155;pseudo=true CP118128.1 Protein Homology CDS 2899865 2901921 . - 0 ID=cds-PUW31_14155;Parent=gene-PUW31_14155;Note=frameshifted;gbkey=CDS;gene=sipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461803.1;locus_tag=PUW31_14155;product=SPI-1 type III secretion system effector SipA;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2901940 2902971 . - . ID=gene-PUW31_14160;Name=sipD;gbkey=Gene;gene=sipD;gene_biotype=protein_coding;locus_tag=PUW31_14160 CP118128.1 Protein Homology CDS 2901940 2902971 . - 0 ID=cds-WJH07413.1;Parent=gene-PUW31_14160;Dbxref=NCBI_GP:WJH07413.1;Name=WJH07413.1;gbkey=CDS;gene=sipD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461804.1;locus_tag=PUW31_14160;product=SPI-1 type III secretion system needle tip complex protein SipD;protein_id=WJH07413.1;transl_table=11 CP118128.1 Genbank pseudogene 2903042 2904270 . - . ID=gene-PUW31_14165;Name=sipC;gbkey=Gene;gene=sipC;gene_biotype=pseudogene;locus_tag=PUW31_14165;pseudo=true CP118128.1 Protein Homology CDS 2903042 2904270 . - 0 ID=cds-PUW31_14165;Parent=gene-PUW31_14165;Note=frameshifted;gbkey=CDS;gene=sipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461805.1;locus_tag=PUW31_14165;product=SPI-1 type III secretion system needle tip complex protein SipC;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2904298 2906079 . - . ID=gene-PUW31_14170;Name=sipB;gbkey=Gene;gene=sipB;gene_biotype=protein_coding;locus_tag=PUW31_14170 CP118128.1 Protein Homology CDS 2904298 2906079 . - 0 ID=cds-WJH07414.1;Parent=gene-PUW31_14170;Dbxref=NCBI_GP:WJH07414.1;Name=WJH07414.1;gbkey=CDS;gene=sipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461806.1;locus_tag=PUW31_14170;product=SPI-1 type III secretion system needle tip complex protein SipB;protein_id=WJH07414.1;transl_table=11 CP118128.1 Genbank gene 2906082 2906579 . - . ID=gene-PUW31_14175;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=protein_coding;locus_tag=PUW31_14175 CP118128.1 Protein Homology CDS 2906082 2906579 . - 0 ID=cds-WJH07415.1;Parent=gene-PUW31_14175;Dbxref=NCBI_GP:WJH07415.1;Name=WJH07415.1;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461807.1;locus_tag=PUW31_14175;product=SycD/LcrH family type III secretion system chaperone SicA;protein_id=WJH07415.1;transl_table=11 CP118128.1 Genbank pseudogene 2906717 2907786 . - . ID=gene-PUW31_14180;Name=spaS;gbkey=Gene;gene=spaS;gene_biotype=pseudogene;locus_tag=PUW31_14180;pseudo=true CP118128.1 Protein Homology CDS 2906717 2907786 . - 0 ID=cds-PUW31_14180;Parent=gene-PUW31_14180;Note=frameshifted;gbkey=CDS;gene=spaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461808.1;locus_tag=PUW31_14180;product=SPI-1 type III secretion system export apparatus protein SpaS;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2907773 2908564 . - . ID=gene-PUW31_14185;Name=spaR;gbkey=Gene;gene=spaR;gene_biotype=protein_coding;locus_tag=PUW31_14185 CP118128.1 Protein Homology CDS 2907773 2908564 . - 0 ID=cds-WJH07416.1;Parent=gene-PUW31_14185;Dbxref=NCBI_GP:WJH07416.1;Name=WJH07416.1;gbkey=CDS;gene=spaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461809.1;locus_tag=PUW31_14185;product=SPI-1 type III secretion system export apparatus protein SpaR;protein_id=WJH07416.1;transl_table=11 CP118128.1 Genbank gene 2908568 2908828 . - . ID=gene-PUW31_14190;Name=spaQ;gbkey=Gene;gene=spaQ;gene_biotype=protein_coding;locus_tag=PUW31_14190 CP118128.1 Protein Homology CDS 2908568 2908828 . - 0 ID=cds-WJH07417.1;Parent=gene-PUW31_14190;Dbxref=NCBI_GP:WJH07417.1;Name=WJH07417.1;gbkey=CDS;gene=spaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461810.1;locus_tag=PUW31_14190;product=SPI-1 type III secretion system export apparatus protein SpaQ;protein_id=WJH07417.1;transl_table=11 CP118128.1 Genbank gene 2908854 2909528 . - . ID=gene-PUW31_14195;Name=spaP;gbkey=Gene;gene=spaP;gene_biotype=protein_coding;locus_tag=PUW31_14195 CP118128.1 Protein Homology CDS 2908854 2909528 . - 0 ID=cds-WJH07418.1;Parent=gene-PUW31_14195;Dbxref=NCBI_GP:WJH07418.1;Name=WJH07418.1;gbkey=CDS;gene=spaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461811.1;locus_tag=PUW31_14195;product=SPI-1 type III secretion system export apparatus protein SpaP;protein_id=WJH07418.1;transl_table=11 CP118128.1 Genbank gene 2909518 2910429 . - . ID=gene-PUW31_14200;Name=spaO;gbkey=Gene;gene=spaO;gene_biotype=protein_coding;locus_tag=PUW31_14200 CP118128.1 Protein Homology CDS 2909518 2910429 . - 0 ID=cds-WJH07419.1;Parent=gene-PUW31_14200;Dbxref=NCBI_GP:WJH07419.1;Name=WJH07419.1;gbkey=CDS;gene=spaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461812.1;locus_tag=PUW31_14200;product=SPI-1 type III secretion system protein SpaO;protein_id=WJH07419.1;transl_table=11 CP118128.1 Genbank gene 2910429 2911439 . - . ID=gene-PUW31_14205;Name=spaN;gbkey=Gene;gene=spaN;gene_biotype=protein_coding;locus_tag=PUW31_14205 CP118128.1 Protein Homology CDS 2910429 2911439 . - 0 ID=cds-WJH07420.1;Parent=gene-PUW31_14205;Dbxref=NCBI_GP:WJH07420.1;Name=WJH07420.1;gbkey=CDS;gene=spaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461813.1;locus_tag=PUW31_14205;product=SPI-1 type III secretion system protein SpaN;protein_id=WJH07420.1;transl_table=11 CP118128.1 Genbank gene 2911439 2911882 . - . ID=gene-PUW31_14210;Name=spaM;gbkey=Gene;gene=spaM;gene_biotype=protein_coding;locus_tag=PUW31_14210 CP118128.1 Protein Homology CDS 2911439 2911882 . - 0 ID=cds-WJH07421.1;Parent=gene-PUW31_14210;Dbxref=NCBI_GP:WJH07421.1;Name=WJH07421.1;gbkey=CDS;gene=spaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461814.1;locus_tag=PUW31_14210;product=SPI-1 type III secretion system protein SpaM;protein_id=WJH07421.1;transl_table=11 CP118128.1 Genbank gene 2911860 2913155 . - . ID=gene-PUW31_14215;Name=invC;gbkey=Gene;gene=invC;gene_biotype=protein_coding;locus_tag=PUW31_14215 CP118128.1 Protein Homology CDS 2911860 2913155 . - 0 ID=cds-WJH07422.1;Parent=gene-PUW31_14215;Dbxref=NCBI_GP:WJH07422.1;Name=WJH07422.1;gbkey=CDS;gene=invC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461815.1;locus_tag=PUW31_14215;product=SctN family type III secretion system ATPase InvC;protein_id=WJH07422.1;transl_table=11 CP118128.1 Genbank gene 2913152 2913559 . - . ID=gene-PUW31_14220;Name=spaK;gbkey=Gene;gene=spaK;gene_biotype=protein_coding;locus_tag=PUW31_14220 CP118128.1 Protein Homology CDS 2913152 2913559 . - 0 ID=cds-WJH07423.1;Parent=gene-PUW31_14220;Dbxref=NCBI_GP:WJH07423.1;Name=WJH07423.1;gbkey=CDS;gene=spaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461816.1;locus_tag=PUW31_14220;product=SPI-1 type III secretion system chaperone SpaK;protein_id=WJH07423.1;transl_table=11 CP118128.1 Genbank gene 2913583 2915640 . - . ID=gene-PUW31_14225;Name=invA;gbkey=Gene;gene=invA;gene_biotype=protein_coding;locus_tag=PUW31_14225 CP118128.1 Protein Homology CDS 2913583 2915640 . - 0 ID=cds-WJH07424.1;Parent=gene-PUW31_14225;Dbxref=NCBI_GP:WJH07424.1;Name=WJH07424.1;gbkey=CDS;gene=invA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461817.1;locus_tag=PUW31_14225;product=type III secretion system export apparatus protein InvA;protein_id=WJH07424.1;transl_table=11 CP118128.1 Genbank gene 2915665 2916783 . - . ID=gene-PUW31_14230;Name=invE;gbkey=Gene;gene=invE;gene_biotype=protein_coding;locus_tag=PUW31_14230 CP118128.1 Protein Homology CDS 2915665 2916783 . - 0 ID=cds-WJH07425.1;Parent=gene-PUW31_14230;Dbxref=NCBI_GP:WJH07425.1;Name=WJH07425.1;gbkey=CDS;gene=invE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461818.1;locus_tag=PUW31_14230;product=type III secretion system gatekeeper InvE;protein_id=WJH07425.1;transl_table=11 CP118128.1 Genbank gene 2916780 2918468 . - . ID=gene-PUW31_14235;Name=invG;gbkey=Gene;gene=invG;gene_biotype=protein_coding;locus_tag=PUW31_14235 CP118128.1 Protein Homology CDS 2916780 2918468 . - 0 ID=cds-WJH07426.1;Parent=gene-PUW31_14235;Dbxref=NCBI_GP:WJH07426.1;Name=WJH07426.1;gbkey=CDS;gene=invG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461819.1;locus_tag=PUW31_14235;product=type III secretion system outer membrane ring protein InvG;protein_id=WJH07426.1;transl_table=11 CP118128.1 Genbank pseudogene 2918465 2919114 . - . ID=gene-PUW31_14240;Name=invF;gbkey=Gene;gene=invF;gene_biotype=pseudogene;locus_tag=PUW31_14240;pseudo=true CP118128.1 Protein Homology CDS 2918465 2919114 . - 0 ID=cds-PUW31_14240;Parent=gene-PUW31_14240;Note=frameshifted;gbkey=CDS;gene=invF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461820.1;locus_tag=PUW31_14240;product=type III secretion system transcriptional activator InvF;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2919570 2920013 . + . ID=gene-PUW31_14245;Name=invH;gbkey=Gene;gene=invH;gene_biotype=protein_coding;locus_tag=PUW31_14245 CP118128.1 Protein Homology CDS 2919570 2920013 . + 0 ID=cds-WJH07427.1;Parent=gene-PUW31_14245;Dbxref=NCBI_GP:WJH07427.1;Name=WJH07427.1;gbkey=CDS;gene=invH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461821.1;locus_tag=PUW31_14245;product=SPI-1 type III secretion system invasion lipoprotein InvH;protein_id=WJH07427.1;transl_table=11 CP118128.1 Genbank pseudogene 2920417 2920606 . + . ID=gene-PUW31_14250;Name=PUW31_14250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_14250;pseudo=true CP118128.1 Protein Homology CDS 2920417 2920606 . + 0 ID=cds-PUW31_14250;Parent=gene-PUW31_14250;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612101.1;locus_tag=PUW31_14250;product=IS3 family transposase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2920876 2921166 . + . ID=gene-PUW31_14255;Name=PUW31_14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14255 CP118128.1 Protein Homology CDS 2920876 2921166 . + 0 ID=cds-WJH07428.1;Parent=gene-PUW31_14255;Dbxref=NCBI_GP:WJH07428.1;Name=WJH07428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461825.1;locus_tag=PUW31_14255;product=DUF1778 domain-containing protein;protein_id=WJH07428.1;transl_table=11 CP118128.1 Genbank gene 2921163 2921690 . + . ID=gene-PUW31_14260;Name=PUW31_14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14260 CP118128.1 Protein Homology CDS 2921163 2921690 . + 0 ID=cds-WJH07429.1;Parent=gene-PUW31_14260;Dbxref=NCBI_GP:WJH07429.1;Name=WJH07429.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461826.1;locus_tag=PUW31_14260;product=GNAT family N-acetyltransferase;protein_id=WJH07429.1;transl_table=11 CP118128.1 Genbank pseudogene 2921763 2921968 . - . ID=gene-PUW31_14265;Name=PUW31_14265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_14265;pseudo=true CP118128.1 Protein Homology CDS 2921763 2921968 . - 0 ID=cds-PUW31_14265;Parent=gene-PUW31_14265;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1;locus_tag=PUW31_14265;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2922327 2922983 . + . ID=gene-PUW31_14270;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=PUW31_14270 CP118128.1 Protein Homology CDS 2922327 2922983 . + 0 ID=cds-WJH07430.1;Parent=gene-PUW31_14270;Dbxref=NCBI_GP:WJH07430.1;Name=WJH07430.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461828.1;locus_tag=PUW31_14270;product=protein-serine/threonine phosphatase;protein_id=WJH07430.1;transl_table=11 CP118128.1 Genbank gene 2923228 2923722 . - . ID=gene-PUW31_14275;Name=PUW31_14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14275 CP118128.1 Protein Homology CDS 2923228 2923722 . - 0 ID=cds-WJH07431.1;Parent=gene-PUW31_14275;Dbxref=NCBI_GP:WJH07431.1;Name=WJH07431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000424949.1;locus_tag=PUW31_14275;product=hypothetical protein;protein_id=WJH07431.1;transl_table=11 CP118128.1 Genbank gene 2923749 2924417 . - . ID=gene-PUW31_14280;Name=PUW31_14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14280 CP118128.1 Protein Homology CDS 2923749 2924417 . - 0 ID=cds-WJH07432.1;Parent=gene-PUW31_14280;Dbxref=NCBI_GP:WJH07432.1;Name=WJH07432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000445913.1;locus_tag=PUW31_14280;product=hypothetical protein;protein_id=WJH07432.1;transl_table=11 CP118128.1 Genbank pseudogene 2925003 2925401 . - . ID=gene-PUW31_14285;Name=PUW31_14285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_14285;pseudo=true CP118128.1 Protein Homology CDS 2925003 2925401 . - 0 ID=cds-PUW31_14285;Parent=gene-PUW31_14285;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461829.1;locus_tag=PUW31_14285;product=cytoplasmic protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2925560 2928127 . + . ID=gene-PUW31_14290;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=PUW31_14290 CP118128.1 Protein Homology CDS 2925560 2928127 . + 0 ID=cds-WJH07433.1;Parent=gene-PUW31_14290;Dbxref=NCBI_GP:WJH07433.1;Name=WJH07433.1;Ontology_term=GO:0006298,GO:0005524;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461830.1;locus_tag=PUW31_14290;product=DNA mismatch repair protein MutS;protein_id=WJH07433.1;transl_table=11 CP118128.1 Genbank gene 2928170 2928550 . - . ID=gene-PUW31_14295;Name=PUW31_14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14295 CP118128.1 Protein Homology CDS 2928170 2928550 . - 0 ID=cds-WJH07434.1;Parent=gene-PUW31_14295;Dbxref=NCBI_GP:WJH07434.1;Name=WJH07434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461831.1;locus_tag=PUW31_14295;product=DUF4440 domain-containing protein;protein_id=WJH07434.1;transl_table=11 CP118128.1 Genbank gene 2928547 2929755 . - . ID=gene-PUW31_14300;Name=PUW31_14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14300 CP118128.1 Protein Homology CDS 2928547 2929755 . - 0 ID=cds-WJH07435.1;Parent=gene-PUW31_14300;Dbxref=NCBI_GP:WJH07435.1;Name=WJH07435.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000222390.1;locus_tag=PUW31_14300;product=MFS transporter;protein_id=WJH07435.1;transl_table=11 CP118128.1 Genbank gene 2929843 2930775 . + . ID=gene-PUW31_14305;Name=PUW31_14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14305 CP118128.1 Protein Homology CDS 2929843 2930775 . + 0 ID=cds-WJH07436.1;Parent=gene-PUW31_14305;Dbxref=NCBI_GP:WJH07436.1;Name=WJH07436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216314.1;locus_tag=PUW31_14305;product=LysR substrate-binding domain-containing protein;protein_id=WJH07436.1;transl_table=11 CP118128.1 Genbank gene 2930817 2932313 . - . ID=gene-PUW31_14310;Name=PUW31_14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14310 CP118128.1 Protein Homology CDS 2930817 2932313 . - 0 ID=cds-WJH07437.1;Parent=gene-PUW31_14310;Dbxref=NCBI_GP:WJH07437.1;Name=WJH07437.1;Ontology_term=GO:0015718,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=solute:proton symporter activity|0015295||IEA;go_process=monocarboxylic acid transport|0015718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461834.1;locus_tag=PUW31_14310;product=gluconate:H+ symporter;protein_id=WJH07437.1;transl_table=11 CP118128.1 Genbank gene 2932310 2933260 . - . ID=gene-PUW31_14315;Name=PUW31_14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14315 CP118128.1 Protein Homology CDS 2932310 2933260 . - 0 ID=cds-WJH07438.1;Parent=gene-PUW31_14315;Dbxref=NCBI_GP:WJH07438.1;Name=WJH07438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461835.1;locus_tag=PUW31_14315;product=SDR family oxidoreductase;protein_id=WJH07438.1;transl_table=11 CP118128.1 Genbank gene 2933300 2934076 . - . ID=gene-PUW31_14320;Name=PUW31_14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14320 CP118128.1 Protein Homology CDS 2933300 2934076 . - 0 ID=cds-WJH07439.1;Parent=gene-PUW31_14320;Dbxref=NCBI_GP:WJH07439.1;Name=WJH07439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461836.1;locus_tag=PUW31_14320;product=HPr family phosphocarrier protein;protein_id=WJH07439.1;transl_table=11 CP118128.1 Genbank gene 2934081 2934719 . - . ID=gene-PUW31_14325;Name=PUW31_14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14325 CP118128.1 Protein Homology CDS 2934081 2934719 . - 0 ID=cds-WJH07440.1;Parent=gene-PUW31_14325;Dbxref=NCBI_GP:WJH07440.1;Name=WJH07440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461837.1;locus_tag=PUW31_14325;product=aldolase;protein_id=WJH07440.1;transl_table=11 CP118128.1 Genbank gene 2934716 2935978 . - . ID=gene-PUW31_14330;Name=PUW31_14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14330 CP118128.1 Protein Homology CDS 2934716 2935978 . - 0 ID=cds-WJH07441.1;Parent=gene-PUW31_14330;Dbxref=NCBI_GP:WJH07441.1;Name=WJH07441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461838.1;locus_tag=PUW31_14330;product=3-oxo-tetronate kinase;protein_id=WJH07441.1;transl_table=11 CP118128.1 Genbank gene 2935972 2936895 . - . ID=gene-PUW31_14335;Name=PUW31_14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14335 CP118128.1 Protein Homology CDS 2935972 2936895 . - 0 ID=cds-WJH07442.1;Parent=gene-PUW31_14335;Dbxref=NCBI_GP:WJH07442.1;Name=WJH07442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461839.1;locus_tag=PUW31_14335;product=NAD(P)-dependent oxidoreductase;protein_id=WJH07442.1;transl_table=11 CP118128.1 Genbank gene 2937092 2937856 . + . ID=gene-PUW31_14340;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=PUW31_14340 CP118128.1 Protein Homology CDS 2937092 2937856 . + 0 ID=cds-WJH07443.1;Parent=gene-PUW31_14340;Dbxref=NCBI_GP:WJH07443.1;Name=WJH07443.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461840.1;locus_tag=PUW31_14340;product=DNA-binding transcriptional repressor YgbI;protein_id=WJH07443.1;transl_table=11 CP118128.1 Genbank gene 2937875 2938279 . - . ID=gene-PUW31_14345;Name=PUW31_14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14345 CP118128.1 Protein Homology CDS 2937875 2938279 . - 0 ID=cds-WJH07444.1;Parent=gene-PUW31_14345;Dbxref=NCBI_GP:WJH07444.1;Name=WJH07444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461841.1;locus_tag=PUW31_14345;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WJH07444.1;transl_table=11 CP118128.1 Genbank gene 2938450 2939043 . + . ID=gene-PUW31_14350;Name=PUW31_14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14350 CP118128.1 Protein Homology CDS 2938450 2939043 . + 0 ID=cds-WJH07445.1;Parent=gene-PUW31_14350;Dbxref=NCBI_GP:WJH07445.1;Name=WJH07445.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461842.1;locus_tag=PUW31_14350;product=non-oxidative hydroxyarylic acid decarboxylases subunit B;protein_id=WJH07445.1;transl_table=11 CP118128.1 Genbank gene 2939043 2940470 . + . ID=gene-PUW31_14355;Name=PUW31_14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14355 CP118128.1 Protein Homology CDS 2939043 2940470 . + 0 ID=cds-WJH07446.1;Parent=gene-PUW31_14355;Dbxref=NCBI_GP:WJH07446.1;Name=WJH07446.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461843.1;locus_tag=PUW31_14355;product=non-oxidative hydroxyarylic acid decarboxylases subunit C;protein_id=WJH07446.1;transl_table=11 CP118128.1 Genbank gene 2940481 2940717 . + . ID=gene-PUW31_14360;Name=PUW31_14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14360 CP118128.1 Protein Homology CDS 2940481 2940717 . + 0 ID=cds-WJH07447.1;Parent=gene-PUW31_14360;Dbxref=NCBI_GP:WJH07447.1;Name=WJH07447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461844.1;locus_tag=PUW31_14360;product=non-oxidative hydroxyarylic acid decarboxylases subunit D;protein_id=WJH07447.1;transl_table=11 CP118128.1 Genbank gene 2940762 2941754 . - . ID=gene-PUW31_14365;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=PUW31_14365 CP118128.1 Protein Homology CDS 2940762 2941754 . - 0 ID=cds-WJH07448.1;Parent=gene-PUW31_14365;Dbxref=NCBI_GP:WJH07448.1;Name=WJH07448.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=PUW31_14365;product=RNA polymerase sigma factor RpoS;protein_id=WJH07448.1;transl_table=11 CP118128.1 Genbank gene 2941817 2942899 . - . ID=gene-PUW31_14370;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=PUW31_14370 CP118128.1 Protein Homology CDS 2941817 2942899 . - 0 ID=cds-WJH10750.1;Parent=gene-PUW31_14370;Dbxref=NCBI_GP:WJH10750.1;Name=WJH10750.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461846.1;locus_tag=PUW31_14370;product=murein hydrolase activator NlpD;protein_id=WJH10750.1;transl_table=11 CP118128.1 Genbank gene 2942829 2942987 . + . ID=gene-PUW31_14375;Name=PUW31_14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14375 CP118128.1 Protein Homology CDS 2942829 2942987 . + 0 ID=cds-WJH10751.1;Parent=gene-PUW31_14375;Dbxref=NCBI_GP:WJH10751.1;Name=WJH10751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541719.1;locus_tag=PUW31_14375;product=peptidase;protein_id=WJH10751.1;transl_table=11 CP118128.1 Genbank gene 2943126 2943752 . - . ID=gene-PUW31_14380;Name=PUW31_14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14380 CP118128.1 Protein Homology CDS 2943126 2943752 . - 0 ID=cds-WJH07449.1;Parent=gene-PUW31_14380;Dbxref=NCBI_GP:WJH07449.1;Name=WJH07449.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=PUW31_14380;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WJH07449.1;transl_table=11 CP118128.1 Genbank gene 2943746 2944507 . - . ID=gene-PUW31_14385;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=PUW31_14385 CP118128.1 Protein Homology CDS 2943746 2944507 . - 0 ID=cds-WJH07450.1;Parent=gene-PUW31_14385;Dbxref=NCBI_GP:WJH07450.1;Name=WJH07450.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461848.1;locus_tag=PUW31_14385;product=5'/3'-nucleotidase SurE;protein_id=WJH07450.1;transl_table=11 CP118128.1 Genbank pseudogene 2944488 2945536 . - . ID=gene-PUW31_14390;Name=truD;gbkey=Gene;gene=truD;gene_biotype=pseudogene;locus_tag=PUW31_14390;pseudo=true CP118128.1 Protein Homology CDS 2944488 2945536 . - 0 ID=cds-PUW31_14390;Parent=gene-PUW31_14390;Note=frameshifted;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461849.1;locus_tag=PUW31_14390;product=tRNA pseudouridine(13) synthase TruD;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2945533 2946012 . - . ID=gene-PUW31_14395;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=PUW31_14395 CP118128.1 Protein Homology CDS 2945533 2946012 . - 0 ID=cds-WJH07451.1;Parent=gene-PUW31_14395;Dbxref=NCBI_GP:WJH07451.1;Name=WJH07451.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461850.1;locus_tag=PUW31_14395;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WJH07451.1;transl_table=11 CP118128.1 Genbank gene 2946012 2946722 . - . ID=gene-PUW31_14400;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=PUW31_14400 CP118128.1 Protein Homology CDS 2946012 2946722 . - 0 ID=cds-WJH07452.1;Parent=gene-PUW31_14400;Dbxref=NCBI_GP:WJH07452.1;Name=WJH07452.1;Ontology_term=GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461851.1;locus_tag=PUW31_14400;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WJH07452.1;transl_table=11 CP118128.1 Genbank gene 2946741 2947052 . - . ID=gene-PUW31_14405;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=PUW31_14405 CP118128.1 Protein Homology CDS 2946741 2947052 . - 0 ID=cds-WJH07453.1;Parent=gene-PUW31_14405;Dbxref=NCBI_GP:WJH07453.1;Name=WJH07453.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461852.1;locus_tag=PUW31_14405;product=cell division protein FtsB;protein_id=WJH07453.1;transl_table=11 CP118128.1 Genbank gene 2947243 2947566 . - . ID=gene-PUW31_14410;Name=PUW31_14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14410 CP118128.1 Protein Homology CDS 2947243 2947566 . - 0 ID=cds-WJH07454.1;Parent=gene-PUW31_14410;Dbxref=NCBI_GP:WJH07454.1;Name=WJH07454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246104.1;locus_tag=PUW31_14410;product=DUF3561 family protein;protein_id=WJH07454.1;transl_table=11 CP118128.1 Genbank gene 2947617 2948222 . - . ID=gene-PUW31_14415;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=PUW31_14415 CP118128.1 Protein Homology CDS 2947617 2948222 . - 0 ID=cds-WJH07455.1;Parent=gene-PUW31_14415;Dbxref=NCBI_GP:WJH07455.1;Name=WJH07455.1;Ontology_term=GO:0006790,GO:0004020;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461854.1;locus_tag=PUW31_14415;product=adenylyl-sulfate kinase;protein_id=WJH07455.1;transl_table=11 CP118128.1 Genbank gene 2948209 2949648 . - . ID=gene-PUW31_14420;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=PUW31_14420 CP118128.1 Protein Homology CDS 2948209 2949648 . - 0 ID=cds-WJH07456.1;Parent=gene-PUW31_14420;Dbxref=NCBI_GP:WJH07456.1;Name=WJH07456.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461855.1;locus_tag=PUW31_14420;product=sulfate adenylyltransferase subunit CysN;protein_id=WJH07456.1;transl_table=11 CP118128.1 Genbank gene 2949658 2950566 . - . ID=gene-PUW31_14425;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=PUW31_14425 CP118128.1 Protein Homology CDS 2949658 2950566 . - 0 ID=cds-WJH07457.1;Parent=gene-PUW31_14425;Dbxref=NCBI_GP:WJH07457.1;Name=WJH07457.1;Ontology_term=GO:0019419,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate reduction|0019419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=PUW31_14425;product=sulfate adenylyltransferase subunit CysD;protein_id=WJH07457.1;transl_table=11 CP118128.1 Genbank gene 2950817 2951863 . + . ID=gene-PUW31_14430;Name=PUW31_14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14430 CP118128.1 Protein Homology CDS 2950817 2951863 . + 0 ID=cds-WJH07458.1;Parent=gene-PUW31_14430;Dbxref=NCBI_GP:WJH07458.1;Name=WJH07458.1;Ontology_term=GO:0008235;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461857.1;locus_tag=PUW31_14430;product=aminopeptidase;protein_id=WJH07458.1;transl_table=11 CP118128.1 Genbank gene 2952126 2952419 . - . ID=gene-PUW31_14435;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=PUW31_14435 CP118128.1 Protein Homology CDS 2952126 2952419 . - 0 ID=cds-WJH07459.1;Parent=gene-PUW31_14435;Dbxref=NCBI_GP:WJH07459.1;Name=WJH07459.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2e;go_function=endoribonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311635.1;locus_tag=PUW31_14435;product=type I-E CRISPR-associated endoribonuclease Cas2e;protein_id=WJH07459.1;transl_table=11 CP118128.1 Genbank pseudogene 2952419 2953338 . - . ID=gene-PUW31_14440;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=pseudogene;locus_tag=PUW31_14440;pseudo=true CP118128.1 Protein Homology CDS 2952419 2953338 . - 0 ID=cds-PUW31_14440;Parent=gene-PUW31_14440;Note=frameshifted;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1e;go_function=nucleic acid binding|0003676||IEA,endodeoxyribonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461859.1;locus_tag=PUW31_14440;product=type I-E CRISPR-associated endonuclease Cas1e;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2953335 2953985 . - . ID=gene-PUW31_14445;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=PUW31_14445 CP118128.1 Protein Homology CDS 2953335 2953985 . - 0 ID=cds-WJH07460.1;Parent=gene-PUW31_14445;Dbxref=NCBI_GP:WJH07460.1;Name=WJH07460.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas6e;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461860.1;locus_tag=PUW31_14445;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=WJH07460.1;transl_table=11 CP118128.1 Genbank gene 2953967 2954713 . - . ID=gene-PUW31_14450;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=PUW31_14450 CP118128.1 Protein Homology CDS 2953967 2954713 . - 0 ID=cds-WJH07461.1;Parent=gene-PUW31_14450;Dbxref=NCBI_GP:WJH07461.1;Name=WJH07461.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas5e;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461861.1;locus_tag=PUW31_14450;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=WJH07461.1;transl_table=11 CP118128.1 Genbank gene 2954724 2955782 . - . ID=gene-PUW31_14455;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=PUW31_14455 CP118128.1 Protein Homology CDS 2954724 2955782 . - 0 ID=cds-WJH07462.1;Parent=gene-PUW31_14455;Dbxref=NCBI_GP:WJH07462.1;Name=WJH07462.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas7e;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461862.1;locus_tag=PUW31_14455;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=WJH07462.1;transl_table=11 CP118128.1 Genbank gene 2955796 2956350 . - . ID=gene-PUW31_14460;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;locus_tag=PUW31_14460 CP118128.1 Protein Homology CDS 2955796 2956350 . - 0 ID=cds-WJH07463.1;Parent=gene-PUW31_14460;Dbxref=NCBI_GP:WJH07463.1;Name=WJH07463.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=casB;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461863.1;locus_tag=PUW31_14460;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=WJH07463.1;transl_table=11 CP118128.1 Genbank gene 2956347 2957903 . - . ID=gene-PUW31_14465;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;locus_tag=PUW31_14465 CP118128.1 Protein Homology CDS 2956347 2957903 . - 0 ID=cds-WJH07464.1;Parent=gene-PUW31_14465;Dbxref=NCBI_GP:WJH07464.1;Name=WJH07464.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=casA;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461864.1;locus_tag=PUW31_14465;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=WJH07464.1;transl_table=11 CP118128.1 Genbank pseudogene 2957915 2960578 . - . ID=gene-PUW31_14470;Name=cas3;gbkey=Gene;gene=cas3;gene_biotype=pseudogene;locus_tag=PUW31_14470;pseudo=true CP118128.1 Protein Homology CDS 2957915 2960578 . - 0 ID=cds-PUW31_14470;Parent=gene-PUW31_14470;Note=internal stop;Ontology_term=GO:0043571,GO:0004386;gbkey=CDS;gene=cas3;go_function=helicase activity|0004386||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461865.1;locus_tag=PUW31_14470;product=CRISPR-associated helicase Cas3';pseudo=true;transl_table=11 CP118128.1 Genbank gene 2961023 2961976 . + . ID=gene-PUW31_14475;Name=sopD;gbkey=Gene;gene=sopD;gene_biotype=protein_coding;locus_tag=PUW31_14475 CP118128.1 Protein Homology CDS 2961023 2961976 . + 0 ID=cds-WJH07465.1;Parent=gene-PUW31_14475;Dbxref=NCBI_GP:WJH07465.1;Name=WJH07465.1;gbkey=CDS;gene=sopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461866.1;locus_tag=PUW31_14475;product=SPI-1 type III secretion system effector SopD;protein_id=WJH07465.1;transl_table=11 CP118128.1 Genbank gene 2962064 2962798 . - . ID=gene-PUW31_14480;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=PUW31_14480 CP118128.1 Protein Homology CDS 2962064 2962798 . - 0 ID=cds-WJH07466.1;Parent=gene-PUW31_14480;Dbxref=NCBI_GP:WJH07466.1;Name=WJH07466.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461867.1;locus_tag=PUW31_14480;product=phosphoadenosine phosphosulfate reductase;protein_id=WJH07466.1;transl_table=11 CP118128.1 Genbank pseudogene 2962900 2964611 . - . ID=gene-PUW31_14485;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=pseudogene;locus_tag=PUW31_14485;pseudo=true CP118128.1 Protein Homology CDS 2962900 2964611 . - 0 ID=cds-PUW31_14485;Parent=gene-PUW31_14485;Note=frameshifted;Ontology_term=GO:0000103,GO:0004783;gbkey=CDS;gene=cysI;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=PUW31_14485;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2964611 2966409 . - . ID=gene-PUW31_14490;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=pseudogene;locus_tag=PUW31_14490;pseudo=true CP118128.1 Protein Homology CDS 2964611 2966409 . - 0 ID=cds-PUW31_14490;Parent=gene-PUW31_14490;Note=frameshifted;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461869.1;locus_tag=PUW31_14490;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2966833 2967195 . + . ID=gene-PUW31_14495;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=PUW31_14495 CP118128.1 Protein Homology CDS 2966833 2967195 . + 0 ID=cds-WJH07467.1;Parent=gene-PUW31_14495;Dbxref=NCBI_GP:WJH07467.1;Name=WJH07467.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461870.1;locus_tag=PUW31_14495;product=6-carboxytetrahydropterin synthase QueD;protein_id=WJH07467.1;transl_table=11 CP118128.1 Genbank gene 2967283 2968080 . - . ID=gene-PUW31_14500;Name=PUW31_14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14500 CP118128.1 Protein Homology CDS 2967283 2968080 . - 0 ID=cds-WJH07468.1;Parent=gene-PUW31_14500;Dbxref=NCBI_GP:WJH07468.1;Name=WJH07468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461871.1;locus_tag=PUW31_14500;product=MBL fold metallo-hydrolase;protein_id=WJH07468.1;transl_table=11 CP118128.1 Genbank direct_repeat 2968180 2968816 . + . ID=id-CP118128.1:2968180..2968816;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=2968241..2968267;rpt_unit_seq=gtttatccccgctggcgcggggaacac CP118128.1 Genbank gene 2969113 2969784 . - . ID=gene-PUW31_14505;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=PUW31_14505 CP118128.1 Protein Homology CDS 2969113 2969784 . - 0 ID=cds-WJH07469.1;Parent=gene-PUW31_14505;Dbxref=NCBI_GP:WJH07469.1;Name=WJH07469.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=PUW31_14505;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WJH07469.1;transl_table=11 CP118128.1 Genbank gene 2969920 2971218 . - . ID=gene-PUW31_14510;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=PUW31_14510 CP118128.1 Protein Homology CDS 2969920 2971218 . - 0 ID=cds-WJH07470.1;Parent=gene-PUW31_14510;Dbxref=NCBI_GP:WJH07470.1;Name=WJH07470.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=PUW31_14510;product=phosphopyruvate hydratase;protein_id=WJH07470.1;transl_table=11 CP118128.1 Genbank gene 2971301 2972938 . - . ID=gene-PUW31_14515;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=PUW31_14515 CP118128.1 Protein Homology CDS 2971301 2972938 . - 0 ID=cds-WJH07471.1;Parent=gene-PUW31_14515;Dbxref=NCBI_GP:WJH07471.1;Name=WJH07471.1;Ontology_term=GO:0009220,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=PUW31_14515;product=CTP synthase (glutamine hydrolyzing);protein_id=WJH07471.1;transl_table=11 CP118128.1 Genbank gene 2973166 2973966 . - . ID=gene-PUW31_14520;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=PUW31_14520 CP118128.1 Protein Homology CDS 2973166 2973966 . - 0 ID=cds-WJH07472.1;Parent=gene-PUW31_14520;Dbxref=NCBI_GP:WJH07472.1;Name=WJH07472.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461875.1;locus_tag=PUW31_14520;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WJH07472.1;transl_table=11 CP118128.1 Genbank gene 2974576 2975163 . + . ID=gene-PUW31_14525;Name=PUW31_14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14525 CP118128.1 Protein Homology CDS 2974576 2975163 . + 0 ID=cds-WJH07473.1;Parent=gene-PUW31_14525;Dbxref=NCBI_GP:WJH07473.1;Name=WJH07473.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466162.1;locus_tag=PUW31_14525;product=fimbrial protein;protein_id=WJH07473.1;transl_table=11 CP118128.1 Genbank gene 2975297 2977648 . + . ID=gene-PUW31_14530;Name=PUW31_14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14530 CP118128.1 Protein Homology CDS 2975297 2977648 . + 0 ID=cds-WJH07474.1;Parent=gene-PUW31_14530;Dbxref=NCBI_GP:WJH07474.1;Name=WJH07474.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF011804.0;locus_tag=PUW31_14530;product=fimbrial biogenesis outer membrane usher protein;protein_id=WJH07474.1;transl_table=11 CP118128.1 Genbank gene 2977612 2977941 . + . ID=gene-PUW31_14535;Name=PUW31_14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14535 CP118128.1 GeneMarkS-2+ CDS 2977612 2977941 . + 0 ID=cds-WJH07475.1;Parent=gene-PUW31_14535;Dbxref=NCBI_GP:WJH07475.1;Name=WJH07475.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_14535;product=hypothetical protein;protein_id=WJH07475.1;transl_table=11 CP118128.1 Genbank gene 2977954 2978727 . + . ID=gene-PUW31_14540;Name=PUW31_14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14540 CP118128.1 Protein Homology CDS 2977954 2978727 . + 0 ID=cds-WJH07476.1;Parent=gene-PUW31_14540;Dbxref=NCBI_GP:WJH07476.1;Name=WJH07476.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044456.1;locus_tag=PUW31_14540;product=fimbria/pilus periplasmic chaperone;protein_id=WJH07476.1;transl_table=11 CP118128.1 Genbank gene 2978747 2979250 . + . ID=gene-PUW31_14545;Name=PUW31_14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14545 CP118128.1 Protein Homology CDS 2978747 2979250 . + 0 ID=cds-WJH07477.1;Parent=gene-PUW31_14545;Dbxref=NCBI_GP:WJH07477.1;Name=WJH07477.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178262.1;locus_tag=PUW31_14545;product=fimbrial protein;protein_id=WJH07477.1;transl_table=11 CP118128.1 Genbank gene 2979265 2979735 . + . ID=gene-PUW31_14550;Name=PUW31_14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14550 CP118128.1 Protein Homology CDS 2979265 2979735 . + 0 ID=cds-WJH07478.1;Parent=gene-PUW31_14550;Dbxref=NCBI_GP:WJH07478.1;Name=WJH07478.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006667202.1;locus_tag=PUW31_14550;product=fimbrial protein;protein_id=WJH07478.1;transl_table=11 CP118128.1 Genbank gene 2979732 2980268 . + . ID=gene-PUW31_14555;Name=PUW31_14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14555 CP118128.1 Protein Homology CDS 2979732 2980268 . + 0 ID=cds-WJH07479.1;Parent=gene-PUW31_14555;Dbxref=NCBI_GP:WJH07479.1;Name=WJH07479.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001079648.1;locus_tag=PUW31_14555;product=fimbrial protein;protein_id=WJH07479.1;transl_table=11 CP118128.1 Genbank gene 2980323 2981354 . + . ID=gene-PUW31_14560;Name=PUW31_14560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14560 CP118128.1 Protein Homology CDS 2980323 2981354 . + 0 ID=cds-WJH07480.1;Parent=gene-PUW31_14560;Dbxref=NCBI_GP:WJH07480.1;Name=WJH07480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750138.1;locus_tag=PUW31_14560;product=hypothetical protein;protein_id=WJH07480.1;transl_table=11 CP118128.1 Genbank gene 2981704 2983938 . - . ID=gene-PUW31_14565;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=PUW31_14565 CP118128.1 Protein Homology CDS 2981704 2983938 . - 0 ID=cds-WJH07481.1;Parent=gene-PUW31_14565;Dbxref=NCBI_GP:WJH07481.1;Name=WJH07481.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461877.1;locus_tag=PUW31_14565;product=GTP diphosphokinase;protein_id=WJH07481.1;transl_table=11 CP118128.1 Genbank gene 2983990 2985285 . - . ID=gene-PUW31_14570;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=PUW31_14570 CP118128.1 Protein Homology CDS 2983990 2985285 . - 0 ID=cds-WJH07482.1;Parent=gene-PUW31_14570;Dbxref=NCBI_GP:WJH07482.1;Name=WJH07482.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461878.1;locus_tag=PUW31_14570;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WJH07482.1;transl_table=11 CP118128.1 Genbank gene 2985343 2988099 . + . ID=gene-PUW31_14575;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=PUW31_14575 CP118128.1 Protein Homology CDS 2985343 2988099 . + 0 ID=cds-WJH07483.1;Parent=gene-PUW31_14575;Dbxref=NCBI_GP:WJH07483.1;Name=WJH07483.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461879.1;locus_tag=PUW31_14575;product=two-component sensor histidine kinase BarA;protein_id=WJH07483.1;transl_table=11 CP118128.1 Genbank pseudogene 2988143 2989285 . - . ID=gene-PUW31_14580;Name=PUW31_14580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_14580;pseudo=true CP118128.1 Protein Homology CDS 2988143 2989285 . - 0 ID=cds-PUW31_14580;Parent=gene-PUW31_14580;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461880.1;locus_tag=PUW31_14580;product=glycerate kinase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2989363 2990703 . - . ID=gene-PUW31_14585;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=pseudogene;locus_tag=PUW31_14585;pseudo=true CP118128.1 Protein Homology CDS 2989363 2990703 . - 0 ID=cds-PUW31_14585;Parent=gene-PUW31_14585;Note=internal stop;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=PUW31_14585;product=glucarate dehydratase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 2990724 2992065 . - . ID=gene-PUW31_14590;Name=PUW31_14590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_14590;pseudo=true CP118128.1 Protein Homology CDS 2990724 2992065 . - 0 ID=cds-PUW31_14590;Parent=gene-PUW31_14590;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461882.1;locus_tag=PUW31_14590;product=enolase C-terminal domain-like protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 2992062 2993420 . - . ID=gene-PUW31_14595;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=PUW31_14595 CP118128.1 Protein Homology CDS 2992062 2993420 . - 0 ID=cds-WJH07484.1;Parent=gene-PUW31_14595;Dbxref=NCBI_GP:WJH07484.1;Name=WJH07484.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461883.1;locus_tag=PUW31_14595;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WJH07484.1;transl_table=11 CP118128.1 Genbank gene 2993503 2993751 . + . ID=gene-PUW31_14600;Name=PUW31_14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14600 CP118128.1 GeneMarkS-2+ CDS 2993503 2993751 . + 0 ID=cds-WJH07485.1;Parent=gene-PUW31_14600;Dbxref=NCBI_GP:WJH07485.1;Name=WJH07485.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_14600;product=hypothetical protein;protein_id=WJH07485.1;transl_table=11 CP118128.1 Genbank gene 2993901 2994350 . - . ID=gene-PUW31_14605;Name=PUW31_14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14605 CP118128.1 Protein Homology CDS 2993901 2994350 . - 0 ID=cds-WJH07486.1;Parent=gene-PUW31_14605;Dbxref=NCBI_GP:WJH07486.1;Name=WJH07486.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461884.1;locus_tag=PUW31_14605;product=flavodoxin;protein_id=WJH07486.1;transl_table=11 CP118128.1 Genbank gene 2994369 2995151 . - . ID=gene-PUW31_14610;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=PUW31_14610 CP118128.1 Protein Homology CDS 2994369 2995151 . - 0 ID=cds-WJH07487.1;Parent=gene-PUW31_14610;Dbxref=NCBI_GP:WJH07487.1;Name=WJH07487.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001715016.1;locus_tag=PUW31_14610;product=tRNA pseudouridine(65) synthase TruC;protein_id=WJH07487.1;transl_table=11 CP118128.1 Genbank gene 2995151 2995480 . - . ID=gene-PUW31_14615;Name=PUW31_14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14615 CP118128.1 Protein Homology CDS 2995151 2995480 . - 0 ID=cds-WJH07488.1;Parent=gene-PUW31_14615;Dbxref=NCBI_GP:WJH07488.1;Name=WJH07488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461886.1;locus_tag=PUW31_14615;product=YqcC family protein;protein_id=WJH07488.1;transl_table=11 CP118128.1 Genbank gene 2996092 2996637 . - . ID=gene-PUW31_14620;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=PUW31_14620 CP118128.1 Protein Homology CDS 2996092 2996637 . - 0 ID=cds-WJH07489.1;Parent=gene-PUW31_14620;Dbxref=NCBI_GP:WJH07489.1;Name=WJH07489.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461887.1;locus_tag=PUW31_14620;product=SecY-interacting protein;protein_id=WJH07489.1;transl_table=11 CP118128.1 Genbank gene 2996706 2997554 . + . ID=gene-PUW31_14625;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=PUW31_14625 CP118128.1 Protein Homology CDS 2996706 2997554 . + 0 ID=cds-WJH07490.1;Parent=gene-PUW31_14625;Dbxref=NCBI_GP:WJH07490.1;Name=WJH07490.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461888.1;locus_tag=PUW31_14625;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WJH07490.1;transl_table=11 CP118128.1 Genbank gene 2997667 2999031 . + . ID=gene-PUW31_14630;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=PUW31_14630 CP118128.1 Protein Homology CDS 2997667 2999031 . + 0 ID=cds-WJH07491.1;Parent=gene-PUW31_14630;Dbxref=NCBI_GP:WJH07491.1;Name=WJH07491.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461889.1;locus_tag=PUW31_14630;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WJH07491.1;transl_table=11 CP118128.1 Genbank gene 2999596 3000885 . + . ID=gene-PUW31_14635;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=PUW31_14635 CP118128.1 Protein Homology CDS 2999596 3000885 . + 0 ID=cds-WJH07492.1;Parent=gene-PUW31_14635;Dbxref=NCBI_GP:WJH07492.1;Name=WJH07492.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461890.1;locus_tag=PUW31_14635;product=HAAAP family serine/threonine permease SdaC;protein_id=WJH07492.1;transl_table=11 CP118128.1 Genbank gene 3000944 3002311 . + . ID=gene-PUW31_14640;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=PUW31_14640 CP118128.1 Protein Homology CDS 3000944 3002311 . + 0 ID=cds-WJH07493.1;Parent=gene-PUW31_14640;Dbxref=NCBI_GP:WJH07493.1;Name=WJH07493.1;gbkey=CDS;gene=sdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461891.2;locus_tag=PUW31_14640;product=L-serine ammonia-lyase II;protein_id=WJH07493.1;transl_table=11 CP118128.1 Genbank gene 3002481 3003236 . + . ID=gene-PUW31_14645;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=PUW31_14645 CP118128.1 Protein Homology CDS 3002481 3003236 . + 0 ID=cds-WJH07494.1;Parent=gene-PUW31_14645;Dbxref=NCBI_GP:WJH07494.1;Name=WJH07494.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=PUW31_14645;product=flap endonuclease Xni;protein_id=WJH07494.1;transl_table=11 CP118128.1 Genbank pseudogene 3003328 3004475 . - . ID=gene-PUW31_14650;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=pseudogene;locus_tag=PUW31_14650;pseudo=true CP118128.1 Protein Homology CDS 3003328 3004475 . - 0 ID=cds-PUW31_14650;Parent=gene-PUW31_14650;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461893.1;locus_tag=PUW31_14650;product=lactaldehyde reductase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 3004492 3005138 . - . ID=gene-PUW31_14655;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=pseudogene;locus_tag=PUW31_14655;pseudo=true CP118128.1 Protein Homology CDS 3004492 3005138 . - 0 ID=cds-PUW31_14655;Parent=gene-PUW31_14655;Note=frameshifted;Ontology_term=GO:0042355;gbkey=CDS;gene=fucA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461894.1;locus_tag=PUW31_14655;product=L-fuculose-phosphate aldolase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3005693 3007009 . + . ID=gene-PUW31_14660;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=PUW31_14660 CP118128.1 Protein Homology CDS 3005693 3007009 . + 0 ID=cds-WJH07495.1;Parent=gene-PUW31_14660;Dbxref=NCBI_GP:WJH07495.1;Name=WJH07495.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=PUW31_14660;product=L-fucose:H+ symporter permease;protein_id=WJH07495.1;transl_table=11 CP118128.1 Genbank gene 3007041 3008816 . + . ID=gene-PUW31_14665;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=PUW31_14665 CP118128.1 Protein Homology CDS 3007041 3008816 . + 0 ID=cds-WJH07496.1;Parent=gene-PUW31_14665;Dbxref=NCBI_GP:WJH07496.1;Name=WJH07496.1;Ontology_term=GO:0006005,GO:0008736;gbkey=CDS;gene=fucI;go_function=L-fucose isomerase activity|0008736||IEA;go_process=L-fucose biosynthetic process|0006005||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461895.1;locus_tag=PUW31_14665;product=L-fucose isomerase;protein_id=WJH07496.1;transl_table=11 CP118128.1 Genbank gene 3008917 3010335 . + . ID=gene-PUW31_14670;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=PUW31_14670 CP118128.1 Protein Homology CDS 3008917 3010335 . + 0 ID=cds-WJH07497.1;Parent=gene-PUW31_14670;Dbxref=NCBI_GP:WJH07497.1;Name=WJH07497.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461896.1;locus_tag=PUW31_14670;product=L-fuculokinase;protein_id=WJH07497.1;transl_table=11 CP118128.1 Genbank gene 3010337 3010759 . + . ID=gene-PUW31_14675;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=PUW31_14675 CP118128.1 Protein Homology CDS 3010337 3010759 . + 0 ID=cds-WJH07498.1;Parent=gene-PUW31_14675;Dbxref=NCBI_GP:WJH07498.1;Name=WJH07498.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461897.1;locus_tag=PUW31_14675;product=L-fucose mutarotase;protein_id=WJH07498.1;transl_table=11 CP118128.1 Genbank gene 3010817 3011527 . + . ID=gene-PUW31_14680;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=PUW31_14680 CP118128.1 Protein Homology CDS 3010817 3011527 . + 0 ID=cds-WJH07499.1;Parent=gene-PUW31_14680;Dbxref=NCBI_GP:WJH07499.1;Name=WJH07499.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461898.1;locus_tag=PUW31_14680;product=L-fucose operon activator;protein_id=WJH07499.1;transl_table=11 CP118128.1 Genbank gene 3011586 3012686 . - . ID=gene-PUW31_14685;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=PUW31_14685 CP118128.1 Protein Homology CDS 3011586 3012686 . - 0 ID=cds-WJH07500.1;Parent=gene-PUW31_14685;Dbxref=NCBI_GP:WJH07500.1;Name=WJH07500.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=PUW31_14685;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WJH07500.1;transl_table=11 CP118128.1 Genbank gene 3012679 3013074 . - . ID=gene-PUW31_14690;Name=PUW31_14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14690 CP118128.1 Protein Homology CDS 3012679 3013074 . - 0 ID=cds-WJH07501.1;Parent=gene-PUW31_14690;Dbxref=NCBI_GP:WJH07501.1;Name=WJH07501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461900.1;locus_tag=PUW31_14690;product=DUF423 domain-containing protein;protein_id=WJH07501.1;transl_table=11 CP118128.1 Genbank gene 3013093 3014010 . - . ID=gene-PUW31_14695;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=PUW31_14695 CP118128.1 Protein Homology CDS 3013093 3014010 . - 0 ID=cds-WJH07502.1;Parent=gene-PUW31_14695;Dbxref=NCBI_GP:WJH07502.1;Name=WJH07502.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=PUW31_14695;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WJH07502.1;transl_table=11 CP118128.1 Genbank gene 3014357 3014584 . - . ID=gene-PUW31_14700;Name=PUW31_14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14700 CP118128.1 Protein Homology CDS 3014357 3014584 . - 0 ID=cds-WJH07503.1;Parent=gene-PUW31_14700;Dbxref=NCBI_GP:WJH07503.1;Name=WJH07503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461902.1;locus_tag=PUW31_14700;product=YgdI/YgdR family lipoprotein;protein_id=WJH07503.1;transl_table=11 CP118128.1 Genbank gene 3014777 3015982 . + . ID=gene-PUW31_14705;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=PUW31_14705 CP118128.1 Protein Homology CDS 3014777 3015982 . + 0 ID=cds-WJH07504.1;Parent=gene-PUW31_14705;Dbxref=NCBI_GP:WJH07504.1;Name=WJH07504.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461903.1;locus_tag=PUW31_14705;product=cysteine desulfurase CsdA;protein_id=WJH07504.1;transl_table=11 CP118128.1 Genbank gene 3015982 3016425 . + . ID=gene-PUW31_14710;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=PUW31_14710 CP118128.1 Protein Homology CDS 3015982 3016425 . + 0 ID=cds-WJH07505.1;Parent=gene-PUW31_14710;Dbxref=NCBI_GP:WJH07505.1;Name=WJH07505.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461904.1;locus_tag=PUW31_14710;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WJH07505.1;transl_table=11 CP118128.1 Genbank gene 3016725 3017612 . + . ID=gene-PUW31_14715;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=PUW31_14715 CP118128.1 Protein Homology CDS 3016725 3017612 . + 0 ID=cds-WJH10752.1;Parent=gene-PUW31_14715;Dbxref=NCBI_GP:WJH10752.1;Name=WJH10752.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461905.3;locus_tag=PUW31_14715;product=EamA family transporter RarD;protein_id=WJH10752.1;transl_table=11 CP118128.1 Genbank gene 3017664 3018470 . - . ID=gene-PUW31_14720;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=PUW31_14720 CP118128.1 Protein Homology CDS 3017664 3018470 . - 0 ID=cds-WJH07506.1;Parent=gene-PUW31_14720;Dbxref=NCBI_GP:WJH07506.1;Name=WJH07506.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461906.1;locus_tag=PUW31_14720;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WJH07506.1;transl_table=11 CP118128.1 Genbank gene 3018580 3019677 . - . ID=gene-PUW31_14725;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=PUW31_14725 CP118128.1 Protein Homology CDS 3018580 3019677 . - 0 ID=cds-WJH07507.1;Parent=gene-PUW31_14725;Dbxref=NCBI_GP:WJH07507.1;Name=WJH07507.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=PUW31_14725;product=murein transglycosylase A;protein_id=WJH07507.1;transl_table=11 CP118128.1 Genbank gene 3019885 3019961 . + . ID=gene-PUW31_14730;Name=PUW31_14730;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_14730 CP118128.1 tRNAscan-SE tRNA 3019885 3019961 . + . ID=rna-PUW31_14730;Parent=gene-PUW31_14730;anticodon=(pos:3019919..3019921);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_14730;product=tRNA-Met CP118128.1 tRNAscan-SE exon 3019885 3019961 . + . ID=exon-PUW31_14730-1;Parent=rna-PUW31_14730;anticodon=(pos:3019919..3019921);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_14730;product=tRNA-Met CP118128.1 Genbank gene 3019991 3020067 . + . ID=gene-PUW31_14735;Name=PUW31_14735;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_14735 CP118128.1 tRNAscan-SE tRNA 3019991 3020067 . + . ID=rna-PUW31_14735;Parent=gene-PUW31_14735;anticodon=(pos:3020025..3020027);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_14735;product=tRNA-Met CP118128.1 tRNAscan-SE exon 3019991 3020067 . + . ID=exon-PUW31_14735-1;Parent=rna-PUW31_14735;anticodon=(pos:3020025..3020027);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_14735;product=tRNA-Met CP118128.1 Genbank gene 3020177 3021430 . - . ID=gene-PUW31_14740;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=PUW31_14740 CP118128.1 Protein Homology CDS 3020177 3021430 . - 0 ID=cds-WJH07508.1;Parent=gene-PUW31_14740;Dbxref=NCBI_GP:WJH07508.1;Name=WJH07508.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461908.1;locus_tag=PUW31_14740;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WJH07508.1;transl_table=11 CP118128.1 Genbank gene 3021663 3022994 . + . ID=gene-PUW31_14745;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=PUW31_14745 CP118128.1 Protein Homology CDS 3021663 3022994 . + 0 ID=cds-WJH07509.1;Parent=gene-PUW31_14745;Dbxref=NCBI_GP:WJH07509.1;Name=WJH07509.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=acetyl-CoA:L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461909.1;locus_tag=PUW31_14745;product=amino-acid N-acetyltransferase;protein_id=WJH07509.1;transl_table=11 CP118128.1 Genbank gene 3023097 3024932 . - . ID=gene-PUW31_14750;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=PUW31_14750 CP118128.1 Protein Homology CDS 3023097 3024932 . - 0 ID=cds-WJH07510.1;Parent=gene-PUW31_14750;Dbxref=NCBI_GP:WJH07510.1;Name=WJH07510.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461910.1;locus_tag=PUW31_14750;product=exodeoxyribonuclease V subunit alpha;protein_id=WJH07510.1;transl_table=11 CP118128.1 Genbank gene 3024929 3028474 . - . ID=gene-PUW31_14755;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=PUW31_14755 CP118128.1 Protein Homology CDS 3024929 3028474 . - 0 ID=cds-WJH07511.1;Parent=gene-PUW31_14755;Dbxref=NCBI_GP:WJH07511.1;Name=WJH07511.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461911.1;locus_tag=PUW31_14755;product=exodeoxyribonuclease V subunit beta;protein_id=WJH07511.1;transl_table=11 CP118128.1 Genbank gene 3028467 3031355 . - . ID=gene-PUW31_14760;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=PUW31_14760 CP118128.1 Protein Homology CDS 3028467 3031355 . - 0 ID=cds-WJH07512.1;Parent=gene-PUW31_14760;Dbxref=NCBI_GP:WJH07512.1;Name=WJH07512.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461912.1;locus_tag=PUW31_14760;product=pitrilysin;protein_id=WJH07512.1;transl_table=11 CP118128.1 Genbank gene 3031533 3032042 . - . ID=gene-PUW31_14765;Name=PUW31_14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14765 CP118128.1 Protein Homology CDS 3031533 3032042 . - 0 ID=cds-WJH10753.1;Parent=gene-PUW31_14765;Dbxref=NCBI_GP:WJH10753.1;Name=WJH10753.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037683.2;locus_tag=PUW31_14765;product=hypothetical protein;protein_id=WJH10753.1;transl_table=11 CP118128.1 Genbank pseudogene 3031940 3034855 . - . ID=gene-PUW31_14770;Name=recC;gbkey=Gene;gene=recC;gene_biotype=pseudogene;locus_tag=PUW31_14770;pseudo=true CP118128.1 Protein Homology CDS 3031940 3034855 . - 0 ID=cds-PUW31_14770;Parent=gene-PUW31_14770;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: protein motif:HMM:NF008289.0;locus_tag=PUW31_14770;product=exodeoxyribonuclease V subunit gamma;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3034919 3035239 . - . ID=gene-PUW31_14775;Name=PUW31_14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14775 CP118128.1 Protein Homology CDS 3034919 3035239 . - 0 ID=cds-WJH07513.1;Parent=gene-PUW31_14775;Dbxref=NCBI_GP:WJH07513.1;Name=WJH07513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461914.1;locus_tag=PUW31_14775;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WJH07513.1;transl_table=11 CP118128.1 Genbank gene 3035224 3035631 . - . ID=gene-PUW31_14780;Name=PUW31_14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14780 CP118128.1 Protein Homology CDS 3035224 3035631 . - 0 ID=cds-WJH07514.1;Parent=gene-PUW31_14780;Dbxref=NCBI_GP:WJH07514.1;Name=WJH07514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461915.1;locus_tag=PUW31_14780;product=DUF2509 family protein;protein_id=WJH07514.1;transl_table=11 CP118128.1 Genbank gene 3035628 3036191 . - . ID=gene-PUW31_14785;Name=PUW31_14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14785 CP118128.1 Protein Homology CDS 3035628 3036191 . - 0 ID=cds-WJH07515.1;Parent=gene-PUW31_14785;Dbxref=NCBI_GP:WJH07515.1;Name=WJH07515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461916.1;locus_tag=PUW31_14785;product=prepilin peptidase-dependent protein;protein_id=WJH07515.1;transl_table=11 CP118128.1 Genbank gene 3036182 3036652 . - . ID=gene-PUW31_14790;Name=PUW31_14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14790 CP118128.1 Protein Homology CDS 3036182 3036652 . - 0 ID=cds-WJH07516.1;Parent=gene-PUW31_14790;Dbxref=NCBI_GP:WJH07516.1;Name=WJH07516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077605.1;locus_tag=PUW31_14790;product=prepilin peptidase-dependent protein;protein_id=WJH07516.1;transl_table=11 CP118128.1 Genbank gene 3036836 3037630 . - . ID=gene-PUW31_14795;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=PUW31_14795 CP118128.1 Protein Homology CDS 3036836 3037630 . - 0 ID=cds-WJH07517.1;Parent=gene-PUW31_14795;Dbxref=NCBI_GP:WJH07517.1;Name=WJH07517.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=PUW31_14795;product=thymidylate synthase;protein_id=WJH07517.1;transl_table=11 CP118128.1 Genbank gene 3037637 3038512 . - . ID=gene-PUW31_14800;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=PUW31_14800 CP118128.1 Protein Homology CDS 3037637 3038512 . - 0 ID=cds-WJH07518.1;Parent=gene-PUW31_14800;Dbxref=NCBI_GP:WJH07518.1;Name=WJH07518.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461919.1;locus_tag=PUW31_14800;product=prolipoprotein diacylglyceryl transferase;protein_id=WJH07518.1;transl_table=11 CP118128.1 Genbank gene 3038728 3040974 . - . ID=gene-PUW31_14805;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=PUW31_14805 CP118128.1 Protein Homology CDS 3038728 3040974 . - 0 ID=cds-WJH07519.1;Parent=gene-PUW31_14805;Dbxref=NCBI_GP:WJH07519.1;Name=WJH07519.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461920.1;locus_tag=PUW31_14805;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WJH07519.1;transl_table=11 CP118128.1 Genbank gene 3040987 3041517 . - . ID=gene-PUW31_14810;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=PUW31_14810 CP118128.1 Protein Homology CDS 3040987 3041517 . - 0 ID=cds-WJH07520.1;Parent=gene-PUW31_14810;Dbxref=NCBI_GP:WJH07520.1;Name=WJH07520.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=PUW31_14810;product=RNA pyrophosphohydrolase;protein_id=WJH07520.1;transl_table=11 CP118128.1 Genbank gene 3042200 3042895 . + . ID=gene-PUW31_14815;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=PUW31_14815 CP118128.1 Protein Homology CDS 3042200 3042895 . + 0 ID=cds-WJH07521.1;Parent=gene-PUW31_14815;Dbxref=NCBI_GP:WJH07521.1;Name=WJH07521.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461922.1;locus_tag=PUW31_14815;product=DNA mismatch repair endonuclease MutH;protein_id=WJH07521.1;transl_table=11 CP118128.1 Genbank gene 3043077 3043790 . + . ID=gene-PUW31_14820;Name=PUW31_14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14820 CP118128.1 Protein Homology CDS 3043077 3043790 . + 0 ID=cds-WJH07522.1;Parent=gene-PUW31_14820;Dbxref=NCBI_GP:WJH07522.1;Name=WJH07522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461923.1;locus_tag=PUW31_14820;product=TerC family protein;protein_id=WJH07522.1;transl_table=11 CP118128.1 Genbank gene 3043934 3044152 . + . ID=gene-PUW31_14825;Name=PUW31_14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14825 CP118128.1 Protein Homology CDS 3043934 3044152 . + 0 ID=cds-WJH07523.1;Parent=gene-PUW31_14825;Dbxref=NCBI_GP:WJH07523.1;Name=WJH07523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461924.1;locus_tag=PUW31_14825;product=YgdI/YgdR family lipoprotein;protein_id=WJH07523.1;transl_table=11 CP118128.1 Genbank gene 3044343 3045383 . + . ID=gene-PUW31_14830;Name=PUW31_14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14830 CP118128.1 Protein Homology CDS 3044343 3045383 . + 0 ID=cds-WJH07524.1;Parent=gene-PUW31_14830;Dbxref=NCBI_GP:WJH07524.1;Name=WJH07524.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461925.1;locus_tag=PUW31_14830;product=NADP(H)-dependent aldo-keto reductase;protein_id=WJH07524.1;transl_table=11 CP118128.1 Genbank gene 3045470 3046672 . - . ID=gene-PUW31_14835;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=PUW31_14835 CP118128.1 Protein Homology CDS 3045470 3046672 . - 0 ID=cds-WJH07525.1;Parent=gene-PUW31_14835;Dbxref=NCBI_GP:WJH07525.1;Name=WJH07525.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461926.1;locus_tag=PUW31_14835;product=lysophospholipid transporter LplT;protein_id=WJH07525.1;transl_table=11 CP118128.1 Genbank gene 3046665 3048824 . - . ID=gene-PUW31_14840;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=PUW31_14840 CP118128.1 Protein Homology CDS 3046665 3048824 . - 0 ID=cds-WJH07526.1;Parent=gene-PUW31_14840;Dbxref=NCBI_GP:WJH07526.1;Name=WJH07526.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461927.1;locus_tag=PUW31_14840;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WJH07526.1;transl_table=11 CP118128.1 Genbank gene 3049417 3050445 . + . ID=gene-PUW31_14845;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=PUW31_14845 CP118128.1 Protein Homology CDS 3049417 3050445 . + 0 ID=cds-WJH07527.1;Parent=gene-PUW31_14845;Dbxref=NCBI_GP:WJH07527.1;Name=WJH07527.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461928.1;locus_tag=PUW31_14845;product=HTH-type transcriptional regulator GalR;protein_id=WJH07527.1;transl_table=11 CP118128.1 Genbank gene 3050456 3051478 . + . ID=gene-PUW31_14850;Name=PUW31_14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14850 CP118128.1 Protein Homology CDS 3050456 3051478 . + 0 ID=cds-WJH10754.1;Parent=gene-PUW31_14850;Dbxref=NCBI_GP:WJH10754.1;Name=WJH10754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461929.1;locus_tag=PUW31_14850;product=LacI family DNA-binding transcriptional regulator;protein_id=WJH10754.1;transl_table=11 CP118128.1 Genbank pseudogene 3051488 3052749 . - . ID=gene-PUW31_14855;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=pseudogene;locus_tag=PUW31_14855;pseudo=true CP118128.1 Protein Homology CDS 3051488 3052749 . - 0 ID=cds-PUW31_14855;Parent=gene-PUW31_14855;Note=frameshifted;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461930.1;locus_tag=PUW31_14855;product=diaminopimelate decarboxylase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3052867 3053802 . + . ID=gene-PUW31_14860;Name=PUW31_14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14860 CP118128.1 Protein Homology CDS 3052867 3053802 . + 0 ID=cds-WJH07528.1;Parent=gene-PUW31_14860;Dbxref=NCBI_GP:WJH07528.1;Name=WJH07528.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461931.1;locus_tag=PUW31_14860;product=LysR family transcriptional regulator;protein_id=WJH07528.1;transl_table=11 CP118128.1 Genbank gene 3053774 3054481 . - . ID=gene-PUW31_14865;Name=PUW31_14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14865 CP118128.1 Protein Homology CDS 3053774 3054481 . - 0 ID=cds-WJH07529.1;Parent=gene-PUW31_14865;Dbxref=NCBI_GP:WJH07529.1;Name=WJH07529.1;Ontology_term=GO:0006807,GO:0016855;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461932.1;locus_tag=PUW31_14865;product=aspartate/glutamate racemase;protein_id=WJH07529.1;transl_table=11 CP118128.1 Genbank pseudogene 3054594 3056007 . - . ID=gene-PUW31_14870;Name=araE;gbkey=Gene;gene=araE;gene_biotype=pseudogene;locus_tag=PUW31_14870;pseudo=true CP118128.1 Protein Homology CDS 3054594 3056007 . - 0 ID=cds-PUW31_14870;Parent=gene-PUW31_14870;Note=frameshifted;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461933.1;locus_tag=PUW31_14870;product=arabinose-proton symporter AraE;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 3056361 3057122 . - . ID=gene-PUW31_14875;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=pseudogene;locus_tag=PUW31_14875;pseudo=true CP118128.1 Protein Homology CDS 3056361 3057122 . - 0 ID=cds-PUW31_14875;Parent=gene-PUW31_14875;Note=internal stop;Ontology_term=GO:0000272,GO:0008678,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=2-deoxy-D-gluconate 3-dehydrogenase activity|0008678||IEA,oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461934.1;locus_tag=PUW31_14875;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3057179 3058015 . - . ID=gene-PUW31_14880;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=PUW31_14880 CP118128.1 Protein Homology CDS 3057179 3058015 . - 0 ID=cds-WJH07530.1;Parent=gene-PUW31_14880;Dbxref=NCBI_GP:WJH07530.1;Name=WJH07530.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461935.1;locus_tag=PUW31_14880;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WJH07530.1;transl_table=11 CP118128.1 Genbank gene 3058446 3059624 . - . ID=gene-PUW31_14885;Name=PUW31_14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14885 CP118128.1 Protein Homology CDS 3058446 3059624 . - 0 ID=cds-WJH07531.1;Parent=gene-PUW31_14885;Dbxref=NCBI_GP:WJH07531.1;Name=WJH07531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461936.1;locus_tag=PUW31_14885;product=acetyl-CoA C-acetyltransferase;protein_id=WJH07531.1;transl_table=11 CP118128.1 Genbank pseudogene 3059747 3060609 . - . ID=gene-PUW31_14890;Name=PUW31_14890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_14890;pseudo=true CP118128.1 Protein Homology CDS 3059747 3060609 . - 0 ID=cds-PUW31_14890;Parent=gene-PUW31_14890;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461937.1;locus_tag=PUW31_14890;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 3060713 3060841 . + . ID=gene-PUW31_14895;Name=PUW31_14895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_14895;pseudo=true CP118128.1 Protein Homology CDS 3060713 3060841 . + 0 ID=cds-PUW31_14895;Parent=gene-PUW31_14895;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465480.1;locus_tag=PUW31_14895;product=chlorhexidine efflux transporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3061017 3061268 . + . ID=gene-PUW31_14900;Name=PUW31_14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14900 CP118128.1 Protein Homology CDS 3061017 3061268 . + 0 ID=cds-WJH10755.1;Parent=gene-PUW31_14900;Dbxref=NCBI_GP:WJH10755.1;Name=WJH10755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449411.1;locus_tag=PUW31_14900;product=hypothetical protein;protein_id=WJH10755.1;transl_table=11 CP118128.1 Genbank gene 3061548 3062354 . + . ID=gene-PUW31_14905;Name=PUW31_14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14905 CP118128.1 Protein Homology CDS 3061548 3062354 . + 0 ID=cds-WJH07532.1;Parent=gene-PUW31_14905;Dbxref=NCBI_GP:WJH07532.1;Name=WJH07532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461953.1;locus_tag=PUW31_14905;product=DUF1460 domain-containing protein;protein_id=WJH07532.1;transl_table=11 CP118128.1 Genbank gene 3062486 3062559 . - . ID=gene-PUW31_14910;Name=PUW31_14910;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_14910 CP118128.1 tRNAscan-SE tRNA 3062486 3062559 . - . ID=rna-PUW31_14910;Parent=gene-PUW31_14910;anticodon=(pos:complement(3062525..3062527));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_14910;product=tRNA-Gly CP118128.1 tRNAscan-SE exon 3062486 3062559 . - . ID=exon-PUW31_14910-1;Parent=rna-PUW31_14910;anticodon=(pos:complement(3062525..3062527));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_14910;product=tRNA-Gly CP118128.1 Genbank gene 3062639 3063397 . - . ID=gene-PUW31_14915;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=PUW31_14915 CP118128.1 Protein Homology CDS 3062639 3063397 . - 0 ID=cds-WJH07533.1;Parent=gene-PUW31_14915;Dbxref=NCBI_GP:WJH07533.1;Name=WJH07533.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461954.1;locus_tag=PUW31_14915;product=amidase activator ActS;protein_id=WJH07533.1;transl_table=11 CP118128.1 Genbank gene 3063662 3064207 . + . ID=gene-PUW31_14920;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=PUW31_14920 CP118128.1 Protein Homology CDS 3063662 3064207 . + 0 ID=cds-WJH07534.1;Parent=gene-PUW31_14920;Dbxref=NCBI_GP:WJH07534.1;Name=WJH07534.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461955.1;locus_tag=PUW31_14920;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WJH07534.1;transl_table=11 CP118128.1 Genbank gene 3064283 3065800 . - . ID=gene-PUW31_14925;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=PUW31_14925 CP118128.1 Protein Homology CDS 3064283 3065800 . - 0 ID=cds-WJH07535.1;Parent=gene-PUW31_14925;Dbxref=NCBI_GP:WJH07535.1;Name=WJH07535.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=PUW31_14925;product=lysine--tRNA ligase;protein_id=WJH07535.1;transl_table=11 CP118128.1 Genbank gene 3065810 3066908 . - . ID=gene-PUW31_14930;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=PUW31_14930 CP118128.1 Protein Homology CDS 3066834 3066908 . - 0 ID=cds-WJH07536.1;Parent=gene-PUW31_14930;Dbxref=NCBI_GP:WJH07536.1;Name=WJH07536.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=PUW31_14930;product=peptide chain release factor 2;protein_id=WJH07536.1;transl_table=11 CP118128.1 Protein Homology CDS 3065810 3066832 . - 0 ID=cds-WJH07536.1;Parent=gene-PUW31_14930;Dbxref=NCBI_GP:WJH07536.1;Name=WJH07536.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=PUW31_14930;product=peptide chain release factor 2;protein_id=WJH07536.1;transl_table=11 CP118128.1 Genbank gene 3067013 3068746 . - . ID=gene-PUW31_14935;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=PUW31_14935 CP118128.1 Protein Homology CDS 3067013 3068746 . - 0 ID=cds-WJH07537.1;Parent=gene-PUW31_14935;Dbxref=NCBI_GP:WJH07537.1;Name=WJH07537.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461958.1;locus_tag=PUW31_14935;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WJH07537.1;transl_table=11 CP118128.1 Genbank gene 3068752 3069465 . - . ID=gene-PUW31_14940;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=PUW31_14940 CP118128.1 Protein Homology CDS 3068752 3069465 . - 0 ID=cds-WJH07538.1;Parent=gene-PUW31_14940;Dbxref=NCBI_GP:WJH07538.1;Name=WJH07538.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461959.1;locus_tag=PUW31_14940;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WJH07538.1;transl_table=11 CP118128.1 Genbank gene 3069489 3070385 . - . ID=gene-PUW31_14945;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=PUW31_14945 CP118128.1 Protein Homology CDS 3069489 3070385 . - 0 ID=cds-WJH07539.1;Parent=gene-PUW31_14945;Dbxref=NCBI_GP:WJH07539.1;Name=WJH07539.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461960.1;locus_tag=PUW31_14945;product=site-specific tyrosine recombinase XerD;protein_id=WJH07539.1;transl_table=11 CP118128.1 Genbank gene 3070498 3071019 . + . ID=gene-PUW31_14950;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=PUW31_14950 CP118128.1 Protein Homology CDS 3070498 3071019 . + 0 ID=cds-WJH07540.1;Parent=gene-PUW31_14950;Dbxref=NCBI_GP:WJH07540.1;Name=WJH07540.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461961.1;locus_tag=PUW31_14950;product=flavodoxin FldB;protein_id=WJH07540.1;transl_table=11 CP118128.1 Genbank gene 3071072 3071485 . - . ID=gene-PUW31_14955;Name=PUW31_14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14955 CP118128.1 Protein Homology CDS 3071072 3071485 . - 0 ID=cds-WJH07541.1;Parent=gene-PUW31_14955;Dbxref=NCBI_GP:WJH07541.1;Name=WJH07541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461962.1;locus_tag=PUW31_14955;product=protein YgfX;protein_id=WJH07541.1;transl_table=11 CP118128.1 Genbank gene 3071466 3071732 . - . ID=gene-PUW31_14960;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=PUW31_14960 CP118128.1 Protein Homology CDS 3071466 3071732 . - 0 ID=cds-WJH07542.1;Parent=gene-PUW31_14960;Dbxref=NCBI_GP:WJH07542.1;Name=WJH07542.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=PUW31_14960;product=FAD assembly factor SdhE;protein_id=WJH07542.1;transl_table=11 CP118128.1 Genbank gene 3071982 3072962 . + . ID=gene-PUW31_14965;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=PUW31_14965 CP118128.1 Protein Homology CDS 3071982 3072962 . + 0 ID=cds-WJH07543.1;Parent=gene-PUW31_14965;Dbxref=NCBI_GP:WJH07543.1;Name=WJH07543.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461964.1;locus_tag=PUW31_14965;product=tRNA-modifying protein YgfZ;protein_id=WJH07543.1;transl_table=11 CP118128.1 Genbank gene 3073078 3073737 . - . ID=gene-PUW31_14970;Name=PUW31_14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14970 CP118128.1 Protein Homology CDS 3073078 3073737 . - 0 ID=cds-WJH07544.1;Parent=gene-PUW31_14970;Dbxref=NCBI_GP:WJH07544.1;Name=WJH07544.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461965.1;locus_tag=PUW31_14970;product=hemolysin III family protein;protein_id=WJH07544.1;transl_table=11 CP118128.1 Genbank gene 3073901 3074212 . - . ID=gene-PUW31_14975;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=PUW31_14975 CP118128.1 Protein Homology CDS 3073901 3074212 . - 0 ID=cds-WJH07545.1;Parent=gene-PUW31_14975;Dbxref=NCBI_GP:WJH07545.1;Name=WJH07545.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461966.1;locus_tag=PUW31_14975;product=N(4)-acetylcytidine aminohydrolase;protein_id=WJH07545.1;transl_table=11 CP118128.1 Genbank pseudogene 3074370 3075802 . + . ID=gene-PUW31_14980;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=pseudogene;locus_tag=PUW31_14980;pseudo=true CP118128.1 Protein Homology CDS 3074370 3075802 . + 0 ID=cds-PUW31_14980;Parent=gene-PUW31_14980;Note=frameshifted;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461967.1;locus_tag=PUW31_14980;product=6-phospho-beta-glucosidase BglA;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3075850 3076743 . - . ID=gene-PUW31_14985;Name=PUW31_14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_14985 CP118128.1 Protein Homology CDS 3075850 3076743 . - 0 ID=cds-WJH07546.1;Parent=gene-PUW31_14985;Dbxref=NCBI_GP:WJH07546.1;Name=WJH07546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461968.1;locus_tag=PUW31_14985;product=transporter;protein_id=WJH07546.1;transl_table=11 CP118128.1 Genbank gene 3077199 3080072 . - . ID=gene-PUW31_14990;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=PUW31_14990 CP118128.1 Protein Homology CDS 3077199 3080072 . - 0 ID=cds-WJH07547.1;Parent=gene-PUW31_14990;Dbxref=NCBI_GP:WJH07547.1;Name=WJH07547.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461969.1;locus_tag=PUW31_14990;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WJH07547.1;transl_table=11 CP118128.1 Genbank gene 3080235 3080624 . - . ID=gene-PUW31_14995;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=PUW31_14995 CP118128.1 Protein Homology CDS 3080235 3080624 . - 0 ID=cds-WJH07548.1;Parent=gene-PUW31_14995;Dbxref=NCBI_GP:WJH07548.1;Name=WJH07548.1;Ontology_term=GO:0019464,GO:0003824;gbkey=CDS;gene=gcvH;go_function=catalytic activity|0003824||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=PUW31_14995;product=glycine cleavage system protein GcvH;protein_id=WJH07548.1;transl_table=11 CP118128.1 Genbank gene 3080650 3081744 . - . ID=gene-PUW31_15000;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=PUW31_15000 CP118128.1 Protein Homology CDS 3080650 3081744 . - 0 ID=cds-WJH07549.1;Parent=gene-PUW31_15000;Dbxref=NCBI_GP:WJH07549.1;Name=WJH07549.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461971.1;locus_tag=PUW31_15000;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WJH07549.1;transl_table=11 CP118128.1 Genbank gene 3082199 3083401 . - . ID=gene-PUW31_15005;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=PUW31_15005 CP118128.1 Protein Homology CDS 3082199 3083401 . - 0 ID=cds-WJH07550.1;Parent=gene-PUW31_15005;Dbxref=NCBI_GP:WJH07550.1;Name=WJH07550.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461972.1;locus_tag=PUW31_15005;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WJH07550.1;transl_table=11 CP118128.1 Genbank gene 3083527 3084705 . - . ID=gene-PUW31_15010;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=PUW31_15010 CP118128.1 Protein Homology CDS 3083527 3084705 . - 0 ID=cds-WJH07551.1;Parent=gene-PUW31_15010;Dbxref=NCBI_GP:WJH07551.1;Name=WJH07551.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461973.2;locus_tag=PUW31_15010;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WJH07551.1;transl_table=11 CP118128.1 Genbank gene 3084702 3086018 . - . ID=gene-PUW31_15015;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=PUW31_15015 CP118128.1 Protein Homology CDS 3084702 3086018 . - 0 ID=cds-WJH07552.1;Parent=gene-PUW31_15015;Dbxref=NCBI_GP:WJH07552.1;Name=WJH07552.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461974.1;locus_tag=PUW31_15015;product=Xaa-Pro aminopeptidase;protein_id=WJH07552.1;transl_table=11 CP118128.1 Genbank gene 3086044 3086622 . - . ID=gene-PUW31_15020;Name=PUW31_15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15020 CP118128.1 Protein Homology CDS 3086044 3086622 . - 0 ID=cds-WJH07553.1;Parent=gene-PUW31_15020;Dbxref=NCBI_GP:WJH07553.1;Name=WJH07553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=PUW31_15020;product=YecA family protein;protein_id=WJH07553.1;transl_table=11 CP118128.1 Genbank gene 3086789 3087118 . + . ID=gene-PUW31_15025;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=PUW31_15025 CP118128.1 Protein Homology CDS 3086789 3087118 . + 0 ID=cds-WJH07554.1;Parent=gene-PUW31_15025;Dbxref=NCBI_GP:WJH07554.1;Name=WJH07554.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461976.1;locus_tag=PUW31_15025;product=cell division protein ZapA;protein_id=WJH07554.1;transl_table=11 CP118128.1 Genbank gene 3087160 3087343 . + . ID=gene-PUW31_15030;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=PUW31_15030 CP118128.1 cmsearch ncRNA 3087160 3087343 . + . ID=rna-PUW31_15030;Parent=gene-PUW31_15030;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_15030;product=6S RNA CP118128.1 cmsearch exon 3087160 3087343 . + . ID=exon-PUW31_15030-1;Parent=rna-PUW31_15030;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_15030;product=6S RNA CP118128.1 Genbank gene 3087364 3087960 . + . ID=gene-PUW31_15035;Name=PUW31_15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15035 CP118128.1 Protein Homology CDS 3087364 3087960 . + 0 ID=cds-WJH07555.1;Parent=gene-PUW31_15035;Dbxref=NCBI_GP:WJH07555.1;Name=WJH07555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=PUW31_15035;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WJH07555.1;transl_table=11 CP118128.1 Genbank gene 3088341 3089573 . - . ID=gene-PUW31_15040;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=PUW31_15040 CP118128.1 Protein Homology CDS 3088341 3089573 . - 0 ID=cds-WJH07556.1;Parent=gene-PUW31_15040;Dbxref=NCBI_GP:WJH07556.1;Name=WJH07556.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461978.1;locus_tag=PUW31_15040;product=phosphoglycerate dehydrogenase;protein_id=WJH07556.1;transl_table=11 CP118128.1 Genbank gene 3089840 3090499 . - . ID=gene-PUW31_15045;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=PUW31_15045 CP118128.1 Protein Homology CDS 3089840 3090499 . - 0 ID=cds-WJH07557.1;Parent=gene-PUW31_15045;Dbxref=NCBI_GP:WJH07557.1;Name=WJH07557.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461979.1;locus_tag=PUW31_15045;product=ribose-5-phosphate isomerase RpiA;protein_id=WJH07557.1;transl_table=11 CP118128.1 Genbank gene 3090653 3091546 . + . ID=gene-PUW31_15050;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=PUW31_15050 CP118128.1 Protein Homology CDS 3090653 3091546 . + 0 ID=cds-WJH07558.1;Parent=gene-PUW31_15050;Dbxref=NCBI_GP:WJH07558.1;Name=WJH07558.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461980.1;locus_tag=PUW31_15050;product=DNA-binding transcriptional regulator ArgP;protein_id=WJH07558.1;transl_table=11 CP118128.1 Genbank gene 3091812 3092558 . - . ID=gene-PUW31_15055;Name=PUW31_15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15055 CP118128.1 Protein Homology CDS 3091812 3092558 . - 0 ID=cds-WJH07559.1;Parent=gene-PUW31_15055;Dbxref=NCBI_GP:WJH07559.1;Name=WJH07559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461981.1;locus_tag=PUW31_15055;product=oxidative stress defense protein;protein_id=WJH07559.1;transl_table=11 CP118128.1 Genbank gene 3092652 3093287 . - . ID=gene-PUW31_15060;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=PUW31_15060 CP118128.1 Protein Homology CDS 3092652 3093287 . - 0 ID=cds-WJH07560.1;Parent=gene-PUW31_15060;Dbxref=NCBI_GP:WJH07560.1;Name=WJH07560.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461982.1;locus_tag=PUW31_15060;product=arginine exporter ArgO;protein_id=WJH07560.1;transl_table=11 CP118128.1 Genbank gene 3093488 3094348 . - . ID=gene-PUW31_15065;Name=PUW31_15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15065 CP118128.1 Protein Homology CDS 3093488 3094348 . - 0 ID=cds-WJH07561.1;Parent=gene-PUW31_15065;Dbxref=NCBI_GP:WJH07561.1;Name=WJH07561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461983.1;locus_tag=PUW31_15065;product=small-conductance mechanosensitive channel MscS;protein_id=WJH07561.1;transl_table=11 CP118128.1 Genbank gene 3094581 3095660 . - . ID=gene-PUW31_15070;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=PUW31_15070 CP118128.1 Protein Homology CDS 3094581 3095660 . - 0 ID=cds-WJH07562.1;Parent=gene-PUW31_15070;Dbxref=NCBI_GP:WJH07562.1;Name=WJH07562.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=PUW31_15070;product=class II fructose-bisphosphate aldolase;protein_id=WJH07562.1;transl_table=11 CP118128.1 Genbank gene 3095762 3096925 . - . ID=gene-PUW31_15075;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=PUW31_15075 CP118128.1 Protein Homology CDS 3095762 3096925 . - 0 ID=cds-WJH07563.1;Parent=gene-PUW31_15075;Dbxref=NCBI_GP:WJH07563.1;Name=WJH07563.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=PUW31_15075;product=phosphoglycerate kinase;protein_id=WJH07563.1;transl_table=11 CP118128.1 Genbank gene 3096947 3097993 . - . ID=gene-PUW31_15080;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=PUW31_15080 CP118128.1 Protein Homology CDS 3096947 3097993 . - 0 ID=cds-WJH07564.1;Parent=gene-PUW31_15080;Dbxref=NCBI_GP:WJH07564.1;Name=WJH07564.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461986.1;locus_tag=PUW31_15080;product=erythrose-4-phosphate dehydrogenase;protein_id=WJH07564.1;transl_table=11 CP118128.1 Genbank gene 3098367 3098792 . + . ID=gene-PUW31_15085;Name=PUW31_15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15085 CP118128.1 Protein Homology CDS 3098367 3098792 . + 0 ID=cds-WJH07565.1;Parent=gene-PUW31_15085;Dbxref=NCBI_GP:WJH07565.1;Name=WJH07565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461987.1;locus_tag=PUW31_15085;product=DNA-binding protein;protein_id=WJH07565.1;transl_table=11 CP118128.1 Genbank gene 3098818 3099396 . + . ID=gene-PUW31_15090;Name=PUW31_15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15090 CP118128.1 Protein Homology CDS 3098818 3099396 . + 0 ID=cds-WJH07566.1;Parent=gene-PUW31_15090;Dbxref=NCBI_GP:WJH07566.1;Name=WJH07566.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461988.1;locus_tag=PUW31_15090;product=ECF transporter S component;protein_id=WJH07566.1;transl_table=11 CP118128.1 Genbank gene 3099397 3100104 . + . ID=gene-PUW31_15095;Name=PUW31_15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15095 CP118128.1 Protein Homology CDS 3099397 3100104 . + 0 ID=cds-WJH07567.1;Parent=gene-PUW31_15095;Dbxref=NCBI_GP:WJH07567.1;Name=WJH07567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461989.1;locus_tag=PUW31_15095;product=energy-coupling factor transporter transmembrane component T;protein_id=WJH07567.1;transl_table=11 CP118128.1 Genbank gene 3100092 3100769 . + . ID=gene-PUW31_15100;Name=PUW31_15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15100 CP118128.1 Protein Homology CDS 3100092 3100769 . + 0 ID=cds-WJH07568.1;Parent=gene-PUW31_15100;Dbxref=NCBI_GP:WJH07568.1;Name=WJH07568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461990.1;locus_tag=PUW31_15100;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WJH07568.1;transl_table=11 CP118128.1 Genbank gene 3100763 3101419 . + . ID=gene-PUW31_15105;Name=PUW31_15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15105 CP118128.1 Protein Homology CDS 3100763 3101419 . + 0 ID=cds-WJH07569.1;Parent=gene-PUW31_15105;Dbxref=NCBI_GP:WJH07569.1;Name=WJH07569.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461991.1;locus_tag=PUW31_15105;product=ATP-binding cassette domain-containing protein;protein_id=WJH07569.1;transl_table=11 CP118128.1 Genbank gene 3101463 3103454 . - . ID=gene-PUW31_15110;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=PUW31_15110 CP118128.1 Protein Homology CDS 3101463 3103454 . - 0 ID=cds-WJH07570.1;Parent=gene-PUW31_15110;Dbxref=NCBI_GP:WJH07570.1;Name=WJH07570.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461992.1;locus_tag=PUW31_15110;product=transketolase;protein_id=WJH07570.1;transl_table=11 CP118128.1 Genbank gene 3103730 3104488 . + . ID=gene-PUW31_15115;Name=PUW31_15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15115 CP118128.1 Protein Homology CDS 3103730 3104488 . + 0 ID=cds-WJH07571.1;Parent=gene-PUW31_15115;Dbxref=NCBI_GP:WJH07571.1;Name=WJH07571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461993.1;locus_tag=PUW31_15115;product=M48 family metallopeptidase;protein_id=WJH07571.1;transl_table=11 CP118128.1 Genbank pseudogene 3104589 3105508 . - . ID=gene-PUW31_15120;Name=speB;gbkey=Gene;gene=speB;gene_biotype=pseudogene;locus_tag=PUW31_15120;pseudo=true CP118128.1 Protein Homology CDS 3104589 3105508 . - 0 ID=cds-PUW31_15120;Parent=gene-PUW31_15120;Note=frameshifted;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499737.1;locus_tag=PUW31_15120;product=agmatinase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3105713 3106669 . - . ID=gene-PUW31_15125;Name=PUW31_15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15125 CP118128.1 Protein Homology CDS 3105713 3106669 . - 0 ID=cds-WJH07572.1;Parent=gene-PUW31_15125;Dbxref=NCBI_GP:WJH07572.1;Name=WJH07572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461995.3;locus_tag=PUW31_15125;product=alpha/beta hydrolase;protein_id=WJH07572.1;transl_table=11 CP118128.1 Genbank gene 3106862 3107356 . - . ID=gene-PUW31_15130;Name=PUW31_15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15130 CP118128.1 Protein Homology CDS 3106862 3107356 . - 0 ID=cds-WJH07573.1;Parent=gene-PUW31_15130;Dbxref=NCBI_GP:WJH07573.1;Name=WJH07573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001839091.1;locus_tag=PUW31_15130;product=YhcH/YjgK/YiaL family protein;protein_id=WJH07573.1;transl_table=11 CP118128.1 Genbank gene 3107395 3108402 . - . ID=gene-PUW31_15135;Name=PUW31_15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15135 CP118128.1 Protein Homology CDS 3107395 3108402 . - 0 ID=cds-WJH07574.1;Parent=gene-PUW31_15135;Dbxref=NCBI_GP:WJH07574.1;Name=WJH07574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461997.1;locus_tag=PUW31_15135;product=Ldh family oxidoreductase;protein_id=WJH07574.1;transl_table=11 CP118128.1 Genbank gene 3108416 3109432 . - . ID=gene-PUW31_15140;Name=PUW31_15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15140 CP118128.1 Protein Homology CDS 3108416 3109432 . - 0 ID=cds-WJH07575.1;Parent=gene-PUW31_15140;Dbxref=NCBI_GP:WJH07575.1;Name=WJH07575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461998.1;locus_tag=PUW31_15140;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WJH07575.1;transl_table=11 CP118128.1 Genbank gene 3109435 3110907 . - . ID=gene-PUW31_15145;Name=PUW31_15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15145 CP118128.1 Protein Homology CDS 3109435 3110907 . - 0 ID=cds-WJH07576.1;Parent=gene-PUW31_15145;Dbxref=NCBI_GP:WJH07576.1;Name=WJH07576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461999.1;locus_tag=PUW31_15145;product=mannitol dehydrogenase family protein;protein_id=WJH07576.1;transl_table=11 CP118128.1 Genbank gene 3111556 3111771 . + . ID=gene-PUW31_15150;Name=PUW31_15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15150 CP118128.1 Protein Homology CDS 3111556 3111771 . + 0 ID=cds-WJH10756.1;Parent=gene-PUW31_15150;Dbxref=NCBI_GP:WJH10756.1;Name=WJH10756.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014766.2;locus_tag=PUW31_15150;product=hypothetical protein;protein_id=WJH10756.1;transl_table=11 CP118128.1 Genbank gene 3111747 3111815 . + . ID=gene-PUW31_15155;Name=PUW31_15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15155 CP118128.1 Protein Homology CDS 3111747 3111815 . + 0 ID=cds-WJH10757.1;Parent=gene-PUW31_15155;Dbxref=NCBI_GP:WJH10757.1;Name=WJH10757.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014766.2;locus_tag=PUW31_15155;product=hypothetical protein;protein_id=WJH10757.1;transl_table=11 CP118128.1 Genbank gene 3112130 3112930 . - . ID=gene-PUW31_15160;Name=PUW31_15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15160 CP118128.1 Protein Homology CDS 3112130 3112930 . - 0 ID=cds-WJH07577.1;Parent=gene-PUW31_15160;Dbxref=NCBI_GP:WJH07577.1;Name=WJH07577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462000.3;locus_tag=PUW31_15160;product=FadR/GntR family transcriptional regulator;protein_id=WJH07577.1;transl_table=11 CP118128.1 Genbank gene 3113084 3113815 . - . ID=gene-PUW31_15165;Name=PUW31_15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15165 CP118128.1 Protein Homology CDS 3113084 3113815 . - 0 ID=cds-WJH07578.1;Parent=gene-PUW31_15165;Dbxref=NCBI_GP:WJH07578.1;Name=WJH07578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462001.1;locus_tag=PUW31_15165;product=hypothetical protein;protein_id=WJH07578.1;transl_table=11 CP118128.1 Genbank gene 3113960 3115936 . - . ID=gene-PUW31_15170;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=PUW31_15170 CP118128.1 Protein Homology CDS 3113960 3115936 . - 0 ID=cds-WJH07579.1;Parent=gene-PUW31_15170;Dbxref=NCBI_GP:WJH07579.1;Name=WJH07579.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462002.1;locus_tag=PUW31_15170;product=biosynthetic arginine decarboxylase;protein_id=WJH07579.1;transl_table=11 CP118128.1 Genbank gene 3115945 3116076 . - . ID=gene-PUW31_15175;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=PUW31_15175 CP118128.1 Protein Homology CDS 3115945 3116076 . - 0 ID=cds-WJH07580.1;Parent=gene-PUW31_15175;Dbxref=NCBI_GP:WJH07580.1;Name=WJH07580.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462003.1;locus_tag=PUW31_15175;product=acid stress response protein YqgB;protein_id=WJH07580.1;transl_table=11 CP118128.1 Genbank gene 3116162 3116311 . - . ID=gene-PUW31_15180;Name=PUW31_15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15180 CP118128.1 Protein Homology CDS 3116162 3116311 . - 0 ID=cds-WJH07581.1;Parent=gene-PUW31_15180;Dbxref=NCBI_GP:WJH07581.1;Name=WJH07581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=PUW31_15180;product=hypothetical protein;protein_id=WJH07581.1;transl_table=11 CP118128.1 Genbank gene 3116371 3116670 . - . ID=gene-PUW31_15185;Name=PUW31_15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15185 CP118128.1 GeneMarkS-2+ CDS 3116371 3116670 . - 0 ID=cds-WJH07582.1;Parent=gene-PUW31_15185;Dbxref=NCBI_GP:WJH07582.1;Name=WJH07582.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_15185;product=hypothetical protein;protein_id=WJH07582.1;transl_table=11 CP118128.1 Genbank pseudogene 3116726 3117879 . + . ID=gene-PUW31_15190;Name=metK;gbkey=Gene;gene=metK;gene_biotype=pseudogene;locus_tag=PUW31_15190;pseudo=true CP118128.1 Protein Homology CDS 3116726 3117879 . + 0 ID=cds-PUW31_15190;Parent=gene-PUW31_15190;Note=frameshifted;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=PUW31_15190;product=methionine adenosyltransferase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3118372 3119766 . + . ID=gene-PUW31_15195;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=PUW31_15195 CP118128.1 Protein Homology CDS 3118372 3119766 . + 0 ID=cds-WJH07583.1;Parent=gene-PUW31_15195;Dbxref=NCBI_GP:WJH07583.1;Name=WJH07583.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462007.1;locus_tag=PUW31_15195;product=galactose/proton symporter;protein_id=WJH07583.1;transl_table=11 CP118128.1 Genbank gene 3119845 3120342 . + . ID=gene-PUW31_15200;Name=PUW31_15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15200 CP118128.1 Protein Homology CDS 3119845 3120342 . + 0 ID=cds-WJH07584.1;Parent=gene-PUW31_15200;Dbxref=NCBI_GP:WJH07584.1;Name=WJH07584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462008.1;locus_tag=PUW31_15200;product=SprT family zinc-dependent metalloprotease;protein_id=WJH07584.1;transl_table=11 CP118128.1 Genbank gene 3120438 3121145 . + . ID=gene-PUW31_15205;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=PUW31_15205 CP118128.1 Protein Homology CDS 3120438 3121145 . + 0 ID=cds-WJH07585.1;Parent=gene-PUW31_15205;Dbxref=NCBI_GP:WJH07585.1;Name=WJH07585.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462009.1;locus_tag=PUW31_15205;product=deoxyribonuclease I;protein_id=WJH07585.1;transl_table=11 CP118128.1 Genbank gene 3121222 3121953 . + . ID=gene-PUW31_15210;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=PUW31_15210 CP118128.1 Protein Homology CDS 3121222 3121953 . + 0 ID=cds-WJH07586.1;Parent=gene-PUW31_15210;Dbxref=NCBI_GP:WJH07586.1;Name=WJH07586.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=PUW31_15210;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WJH07586.1;transl_table=11 CP118128.1 Genbank gene 3121973 3122920 . + . ID=gene-PUW31_15215;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=PUW31_15215 CP118128.1 Protein Homology CDS 3121973 3122920 . + 0 ID=cds-WJH07587.1;Parent=gene-PUW31_15215;Dbxref=NCBI_GP:WJH07587.1;Name=WJH07587.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462011.1;locus_tag=PUW31_15215;product=glutathione synthase;protein_id=WJH07587.1;transl_table=11 CP118128.1 Genbank gene 3123136 3123699 . + . ID=gene-PUW31_15220;Name=PUW31_15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15220 CP118128.1 Protein Homology CDS 3123136 3123699 . + 0 ID=cds-WJH07588.1;Parent=gene-PUW31_15220;Dbxref=NCBI_GP:WJH07588.1;Name=WJH07588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=PUW31_15220;product=YqgE/AlgH family protein;protein_id=WJH07588.1;transl_table=11 CP118128.1 Genbank gene 3123699 3124115 . + . ID=gene-PUW31_15225;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=PUW31_15225 CP118128.1 Protein Homology CDS 3123699 3124115 . + 0 ID=cds-WJH07589.1;Parent=gene-PUW31_15225;Dbxref=NCBI_GP:WJH07589.1;Name=WJH07589.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462013.1;locus_tag=PUW31_15225;product=Holliday junction resolvase RuvX;protein_id=WJH07589.1;transl_table=11 CP118128.1 Genbank gene 3124162 3124848 . - . ID=gene-PUW31_15230;Name=PUW31_15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15230 CP118128.1 Protein Homology CDS 3124162 3124848 . - 0 ID=cds-WJH07590.1;Parent=gene-PUW31_15230;Dbxref=NCBI_GP:WJH07590.1;Name=WJH07590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462014.1;locus_tag=PUW31_15230;product=IclR family transcriptional regulator;protein_id=WJH07590.1;transl_table=11 CP118128.1 Genbank gene 3124980 3125960 . - . ID=gene-PUW31_15235;Name=PUW31_15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15235 CP118128.1 Protein Homology CDS 3124980 3125960 . - 0 ID=cds-WJH07591.1;Parent=gene-PUW31_15235;Dbxref=NCBI_GP:WJH07591.1;Name=WJH07591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462015.1;locus_tag=PUW31_15235;product=type IV pilus twitching motility protein PilT;protein_id=WJH07591.1;transl_table=11 CP118128.1 Genbank pseudogene 3125978 3126681 . + . ID=gene-PUW31_15240;Name=PUW31_15240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_15240;pseudo=true CP118128.1 Protein Homology CDS 3125978 3126681 . + 0 ID=cds-PUW31_15240;Parent=gene-PUW31_15240;Note=frameshifted;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462016.1;locus_tag=PUW31_15240;product=YggS family pyridoxal phosphate-dependent enzyme;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3126700 3127266 . + . ID=gene-PUW31_15245;Name=PUW31_15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15245 CP118128.1 Protein Homology CDS 3126700 3127266 . + 0 ID=cds-WJH07592.1;Parent=gene-PUW31_15245;Dbxref=NCBI_GP:WJH07592.1;Name=WJH07592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462017.1;locus_tag=PUW31_15245;product=YggT family protein;protein_id=WJH07592.1;transl_table=11 CP118128.1 Genbank gene 3127263 3127553 . + . ID=gene-PUW31_15250;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=PUW31_15250 CP118128.1 Protein Homology CDS 3127263 3127553 . + 0 ID=cds-WJH07593.1;Parent=gene-PUW31_15250;Dbxref=NCBI_GP:WJH07593.1;Name=WJH07593.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462018.1;locus_tag=PUW31_15250;product=DUF167 family protein YggU;protein_id=WJH07593.1;transl_table=11 CP118128.1 Genbank gene 3127561 3128154 . + . ID=gene-PUW31_15255;Name=PUW31_15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15255 CP118128.1 Protein Homology CDS 3127561 3128154 . + 0 ID=cds-WJH07594.1;Parent=gene-PUW31_15255;Dbxref=NCBI_GP:WJH07594.1;Name=WJH07594.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462019.1;locus_tag=PUW31_15255;product=XTP/dITP diphosphatase;protein_id=WJH07594.1;transl_table=11 CP118128.1 Genbank gene 3128147 3129283 . + . ID=gene-PUW31_15260;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=PUW31_15260 CP118128.1 Protein Homology CDS 3128147 3129283 . + 0 ID=cds-WJH07595.1;Parent=gene-PUW31_15260;Dbxref=NCBI_GP:WJH07595.1;Name=WJH07595.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462020.1;locus_tag=PUW31_15260;product=radical SAM family heme chaperone HemW;protein_id=WJH07595.1;transl_table=11 CP118128.1 Genbank pseudogene 3129374 3130381 . - . ID=gene-PUW31_15265;Name=PUW31_15265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_15265;pseudo=true CP118128.1 Protein Homology CDS 3129374 3130381 . - 0 ID=cds-PUW31_15265;Parent=gene-PUW31_15265;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462021.1;locus_tag=PUW31_15265;product=DUF1202 domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3130514 3131560 . - . ID=gene-PUW31_15270;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=PUW31_15270 CP118128.1 Protein Homology CDS 3130514 3131560 . - 0 ID=cds-WJH07596.1;Parent=gene-PUW31_15270;Dbxref=NCBI_GP:WJH07596.1;Name=WJH07596.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462022.1;locus_tag=PUW31_15270;product=L-asparaginase 2;protein_id=WJH07596.1;transl_table=11 CP118128.1 Genbank pseudogene 3131749 3132467 . - . ID=gene-PUW31_15275;Name=PUW31_15275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_15275;pseudo=true CP118128.1 Protein Homology CDS 3131749 3132467 . - 0 ID=cds-PUW31_15275;Parent=gene-PUW31_15275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462023.1;locus_tag=PUW31_15275;product=DUF2884 domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3132517 3132843 . - . ID=gene-PUW31_15280;Name=PUW31_15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15280 CP118128.1 Protein Homology CDS 3132517 3132843 . - 0 ID=cds-WJH07597.1;Parent=gene-PUW31_15280;Dbxref=NCBI_GP:WJH07597.1;Name=WJH07597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462024.1;locus_tag=PUW31_15280;product=YggL family protein;protein_id=WJH07597.1;transl_table=11 CP118128.1 Genbank gene 3132843 3133562 . - . ID=gene-PUW31_15285;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=PUW31_15285 CP118128.1 Protein Homology CDS 3132843 3133562 . - 0 ID=cds-WJH07598.1;Parent=gene-PUW31_15285;Dbxref=NCBI_GP:WJH07598.1;Name=WJH07598.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462025.1;locus_tag=PUW31_15285;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WJH07598.1;transl_table=11 CP118128.1 Genbank gene 3133717 3134769 . + . ID=gene-PUW31_15290;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=PUW31_15290 CP118128.1 Protein Homology CDS 3133717 3134769 . + 0 ID=cds-WJH07599.1;Parent=gene-PUW31_15290;Dbxref=NCBI_GP:WJH07599.1;Name=WJH07599.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462026.1;locus_tag=PUW31_15290;product=A/G-specific adenine glycosylase;protein_id=WJH07599.1;transl_table=11 CP118128.1 Genbank gene 3134797 3135072 . + . ID=gene-PUW31_15295;Name=PUW31_15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15295 CP118128.1 Protein Homology CDS 3134797 3135072 . + 0 ID=cds-WJH07600.1;Parent=gene-PUW31_15295;Dbxref=NCBI_GP:WJH07600.1;Name=WJH07600.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462027.1;locus_tag=PUW31_15295;product=oxidative damage protection protein;protein_id=WJH07600.1;transl_table=11 CP118128.1 Genbank gene 3135185 3136270 . + . ID=gene-PUW31_15300;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=PUW31_15300 CP118128.1 Protein Homology CDS 3135185 3136270 . + 0 ID=cds-WJH07601.1;Parent=gene-PUW31_15300;Dbxref=NCBI_GP:WJH07601.1;Name=WJH07601.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462028.1;locus_tag=PUW31_15300;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WJH07601.1;transl_table=11 CP118128.1 Genbank gene 3136487 3137743 . + . ID=gene-PUW31_15305;Name=PUW31_15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15305 CP118128.1 Protein Homology CDS 3136487 3137743 . + 0 ID=cds-WJH07602.1;Parent=gene-PUW31_15305;Dbxref=NCBI_GP:WJH07602.1;Name=WJH07602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462029.1;locus_tag=PUW31_15305;product=nucleoside permease;protein_id=WJH07602.1;transl_table=11 CP118128.1 Genbank pseudogene 3137805 3139936 . - . ID=gene-PUW31_15310;Name=PUW31_15310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_15310;pseudo=true CP118128.1 Protein Homology CDS 3137805 3139936 . - 0 ID=cds-PUW31_15310;Parent=gene-PUW31_15310;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462030.1;locus_tag=PUW31_15310;product=ornithine decarboxylase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3140361 3141068 . + . ID=gene-PUW31_15315;Name=PUW31_15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15315 CP118128.1 Protein Homology CDS 3140361 3141068 . + 0 ID=cds-WJH07603.1;Parent=gene-PUW31_15315;Dbxref=NCBI_GP:WJH07603.1;Name=WJH07603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462031.1;locus_tag=PUW31_15315;product=DUF554 domain-containing protein;protein_id=WJH07603.1;transl_table=11 CP118128.1 Genbank gene 3141174 3141249 . + . ID=gene-PUW31_15320;Name=PUW31_15320;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_15320 CP118128.1 tRNAscan-SE tRNA 3141174 3141249 . + . ID=rna-PUW31_15320;Parent=gene-PUW31_15320;anticodon=(pos:3141207..3141209);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_15320;product=tRNA-Phe CP118128.1 tRNAscan-SE exon 3141174 3141249 . + . ID=exon-PUW31_15320-1;Parent=rna-PUW31_15320;anticodon=(pos:3141207..3141209);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_15320;product=tRNA-Phe CP118128.1 Genbank gene 3141408 3141788 . - . ID=gene-PUW31_15325;Name=PUW31_15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15325 CP118128.1 Protein Homology CDS 3141408 3141788 . - 0 ID=cds-WJH07604.1;Parent=gene-PUW31_15325;Dbxref=NCBI_GP:WJH07604.1;Name=WJH07604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582669.1;locus_tag=PUW31_15325;product=VOC family protein;protein_id=WJH07604.1;transl_table=11 CP118128.1 Genbank gene 3141852 3143177 . - . ID=gene-PUW31_15330;Name=ripA;gbkey=Gene;gene=ripA;gene_biotype=protein_coding;gene_synonym=ict;locus_tag=PUW31_15330 CP118128.1 Protein Homology CDS 3141852 3143177 . - 0 ID=cds-WJH07605.1;Parent=gene-PUW31_15330;Dbxref=NCBI_GP:WJH07605.1;Name=WJH07605.1;Note=Transfers CoA from succinate to itaconate;gbkey=CDS;gene=ripA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462033.1;locus_tag=PUW31_15330;product=itaconate CoA-transferase RipA/Ict;protein_id=WJH07605.1;transl_table=11 CP118128.1 Genbank pseudogene 3143202 3143728 . - . ID=gene-PUW31_15335;Name=ripB;gbkey=Gene;gene=ripB;gene_biotype=pseudogene;locus_tag=PUW31_15335;pseudo=true CP118128.1 Protein Homology CDS 3143202 3143728 . - 0 ID=cds-PUW31_15335;Parent=gene-PUW31_15335;Note=Second step in itaconate degradation.%3B frameshifted;gbkey=CDS;gene=ripB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462034.1;locus_tag=PUW31_15335;product=(R)-specific enoyl-CoA hydratase RipB/Ich;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3143752 3144594 . - . ID=gene-PUW31_15340;Name=ripC;gbkey=Gene;gene=ripC;gene_biotype=protein_coding;locus_tag=PUW31_15340 CP118128.1 Protein Homology CDS 3143752 3144594 . - 0 ID=cds-WJH07606.1;Parent=gene-PUW31_15340;Dbxref=NCBI_GP:WJH07606.1;Name=WJH07606.1;Note=Third step in itaconate degradation.;gbkey=CDS;gene=ripC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462035.1;locus_tag=PUW31_15340;product=itaconate degradation C-C-lyase RipC;protein_id=WJH07606.1;transl_table=11 CP118128.1 Genbank gene 3144686 3145564 . + . ID=gene-PUW31_15345;Name=ripR;gbkey=Gene;gene=ripR;gene_biotype=protein_coding;locus_tag=PUW31_15345 CP118128.1 Protein Homology CDS 3144686 3145564 . + 0 ID=cds-WJH07607.1;Parent=gene-PUW31_15345;Dbxref=NCBI_GP:WJH07607.1;Name=WJH07607.1;gbkey=CDS;gene=ripR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462036.1;locus_tag=PUW31_15345;product=itaconate degradation transcriptional regulator RipR;protein_id=WJH07607.1;transl_table=11 CP118128.1 Genbank gene 3145612 3147351 . - . ID=gene-PUW31_15350;Name=PUW31_15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15350 CP118128.1 Protein Homology CDS 3145612 3147351 . - 0 ID=cds-WJH07608.1;Parent=gene-PUW31_15350;Dbxref=NCBI_GP:WJH07608.1;Name=WJH07608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462037.1;locus_tag=PUW31_15350;product=arylsulfatase;protein_id=WJH07608.1;transl_table=11 CP118128.1 Genbank pseudogene 3147420 3148603 . - . ID=gene-PUW31_15355;Name=PUW31_15355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_15355;pseudo=true CP118128.1 Protein Homology CDS 3147420 3148603 . - 0 ID=cds-PUW31_15355;Parent=gene-PUW31_15355;Note=frameshifted;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462038.1;locus_tag=PUW31_15355;product=anaerobic sulfatase maturase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3149115 3149798 . + . ID=gene-PUW31_15360;Name=PUW31_15360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15360 CP118128.1 Protein Homology CDS 3149115 3149798 . + 0 ID=cds-WJH10758.1;Parent=gene-PUW31_15360;Dbxref=NCBI_GP:WJH10758.1;Name=WJH10758.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462039.1;locus_tag=PUW31_15360;product=LuxR C-terminal-related transcriptional regulator;protein_id=WJH10758.1;transl_table=11 CP118128.1 Genbank gene 3149902 3150459 . - . ID=gene-PUW31_15365;Name=PUW31_15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15365 CP118128.1 Protein Homology CDS 3149902 3150459 . - 0 ID=cds-WJH07609.1;Parent=gene-PUW31_15365;Dbxref=NCBI_GP:WJH07609.1;Name=WJH07609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462040.1;locus_tag=PUW31_15365;product=DUF3156 family protein;protein_id=WJH07609.1;transl_table=11 CP118128.1 Genbank gene 3150437 3151936 . - . ID=gene-PUW31_15370;Name=PUW31_15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15370 CP118128.1 Protein Homology CDS 3150437 3151936 . - 0 ID=cds-WJH07610.1;Parent=gene-PUW31_15370;Dbxref=NCBI_GP:WJH07610.1;Name=WJH07610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462041.1;locus_tag=PUW31_15370;product=APC family permease;protein_id=WJH07610.1;transl_table=11 CP118128.1 Genbank gene 3152145 3152519 . - . ID=gene-PUW31_15375;Name=PUW31_15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15375 CP118128.1 Protein Homology CDS 3152145 3152519 . - 0 ID=cds-WJH07611.1;Parent=gene-PUW31_15375;Dbxref=NCBI_GP:WJH07611.1;Name=WJH07611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462042.1;locus_tag=PUW31_15375;product=cupin domain-containing protein;protein_id=WJH07611.1;transl_table=11 CP118128.1 Genbank gene 3152534 3153835 . - . ID=gene-PUW31_15380;Name=PUW31_15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15380 CP118128.1 Protein Homology CDS 3152534 3153835 . - 0 ID=cds-WJH07612.1;Parent=gene-PUW31_15380;Dbxref=NCBI_GP:WJH07612.1;Name=WJH07612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462043.1;locus_tag=PUW31_15380;product=FAD-binding oxidoreductase;protein_id=WJH07612.1;transl_table=11 CP118128.1 Genbank gene 3153997 3155481 . + . ID=gene-PUW31_15385;Name=PUW31_15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15385 CP118128.1 Protein Homology CDS 3153997 3155481 . + 0 ID=cds-WJH07613.1;Parent=gene-PUW31_15385;Dbxref=NCBI_GP:WJH07613.1;Name=WJH07613.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462044.1;locus_tag=PUW31_15385;product=aldehyde dehydrogenase family protein;protein_id=WJH07613.1;transl_table=11 CP118128.1 Genbank gene 3155617 3155997 . - . ID=gene-PUW31_15390;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=PUW31_15390 CP118128.1 Protein Homology CDS 3155617 3155997 . - 0 ID=cds-WJH10759.1;Parent=gene-PUW31_15390;Dbxref=NCBI_GP:WJH10759.1;Name=WJH10759.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462045.1;locus_tag=PUW31_15390;product=anti-adapter protein IraD;protein_id=WJH10759.1;transl_table=11 CP118128.1 Genbank gene 3155997 3156482 . - . ID=gene-PUW31_15395;Name=PUW31_15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15395 CP118128.1 Protein Homology CDS 3155997 3156482 . - 0 ID=cds-WJH07614.1;Parent=gene-PUW31_15395;Dbxref=NCBI_GP:WJH07614.1;Name=WJH07614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462046.1;locus_tag=PUW31_15395;product=Hcp family type VI secretion system effector;protein_id=WJH07614.1;transl_table=11 CP118128.1 Genbank gene 3157208 3158131 . - . ID=gene-PUW31_15400;Name=PUW31_15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15400 CP118128.1 Protein Homology CDS 3157208 3158131 . - 0 ID=cds-WJH07615.1;Parent=gene-PUW31_15400;Dbxref=NCBI_GP:WJH07615.1;Name=WJH07615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462047.1;locus_tag=PUW31_15400;product=polysaccharide deacetylase;protein_id=WJH07615.1;transl_table=11 CP118128.1 Genbank gene 3158170 3159048 . - . ID=gene-PUW31_15405;Name=PUW31_15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15405 CP118128.1 Protein Homology CDS 3158170 3159048 . - 0 ID=cds-WJH07616.1;Parent=gene-PUW31_15405;Dbxref=NCBI_GP:WJH07616.1;Name=WJH07616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462048.1;locus_tag=PUW31_15405;product=carbon-nitrogen hydrolase family protein;protein_id=WJH07616.1;transl_table=11 CP118128.1 Genbank gene 3159444 3160748 . - . ID=gene-PUW31_15410;Name=PUW31_15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15410 CP118128.1 Protein Homology CDS 3159444 3160748 . - 0 ID=cds-WJH07617.1;Parent=gene-PUW31_15410;Dbxref=NCBI_GP:WJH07617.1;Name=WJH07617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462049.1;locus_tag=PUW31_15410;product=MFS transporter;protein_id=WJH07617.1;transl_table=11 CP118128.1 Genbank gene 3161153 3162337 . + . ID=gene-PUW31_15415;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=PUW31_15415 CP118128.1 Protein Homology CDS 3161153 3162337 . + 0 ID=cds-WJH07618.1;Parent=gene-PUW31_15415;Dbxref=NCBI_GP:WJH07618.1;Name=WJH07618.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462050.1;locus_tag=PUW31_15415;product=mannonate dehydratase;protein_id=WJH07618.1;transl_table=11 CP118128.1 Genbank gene 3162448 3163920 . + . ID=gene-PUW31_15420;Name=PUW31_15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15420 CP118128.1 Protein Homology CDS 3162448 3163920 . + 0 ID=cds-WJH07619.1;Parent=gene-PUW31_15420;Dbxref=NCBI_GP:WJH07619.1;Name=WJH07619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462051.1;locus_tag=PUW31_15420;product=fructuronate reductase;protein_id=WJH07619.1;transl_table=11 CP118128.1 Genbank gene 3163932 3165344 . + . ID=gene-PUW31_15425;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=PUW31_15425 CP118128.1 Protein Homology CDS 3163932 3165344 . + 0 ID=cds-WJH07620.1;Parent=gene-PUW31_15425;Dbxref=NCBI_GP:WJH07620.1;Name=WJH07620.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462052.1;locus_tag=PUW31_15425;product=glucuronate isomerase;protein_id=WJH07620.1;transl_table=11 CP118128.1 Genbank gene 3165644 3166699 . - . ID=gene-PUW31_15430;Name=PUW31_15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15430 CP118128.1 Protein Homology CDS 3165644 3166699 . - 0 ID=cds-WJH07621.1;Parent=gene-PUW31_15430;Dbxref=NCBI_GP:WJH07621.1;Name=WJH07621.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462053.1;locus_tag=PUW31_15430;product=methyl-accepting chemotaxis protein;protein_id=WJH07621.1;transl_table=11 CP118128.1 Genbank pseudogene 3167369 3169224 . - . ID=gene-PUW31_15435;Name=gss;gbkey=Gene;gene=gss;gene_biotype=pseudogene;locus_tag=PUW31_15435;pseudo=true CP118128.1 Protein Homology CDS 3167369 3169224 . - 0 ID=cds-PUW31_15435;Parent=gene-PUW31_15435;Note=frameshifted;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462054.1;locus_tag=PUW31_15435;product=bifunctional glutathionylspermidine amidase/synthase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 3169451 3170316 . + . ID=gene-PUW31_15440;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=pseudogene;locus_tag=PUW31_15440;pseudo=true CP118128.1 Protein Homology CDS 3169451 3170316 . + 0 ID=cds-PUW31_15440;Parent=gene-PUW31_15440;Note=frameshifted;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462055.1;locus_tag=PUW31_15440;product=glutathione-dependent disulfide-bond oxidoreductase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3170384 3171094 . - . ID=gene-PUW31_15445;Name=PUW31_15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15445 CP118128.1 Protein Homology CDS 3170384 3171094 . - 0 ID=cds-WJH07622.1;Parent=gene-PUW31_15445;Dbxref=NCBI_GP:WJH07622.1;Name=WJH07622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462056.1;locus_tag=PUW31_15445;product=molybdate ABC transporter substrate-binding protein;protein_id=WJH07622.1;transl_table=11 CP118128.1 Genbank gene 3171094 3172146 . - . ID=gene-PUW31_15450;Name=PUW31_15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15450 CP118128.1 Protein Homology CDS 3171094 3172146 . - 0 ID=cds-WJH07623.1;Parent=gene-PUW31_15450;Dbxref=NCBI_GP:WJH07623.1;Name=WJH07623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462057.1;locus_tag=PUW31_15450;product=ABC transporter substrate-binding protein;protein_id=WJH07623.1;transl_table=11 CP118128.1 Genbank gene 3172222 3172470 . - . ID=gene-PUW31_15455;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=PUW31_15455 CP118128.1 Protein Homology CDS 3172222 3172470 . - 0 ID=cds-WJH07624.1;Parent=gene-PUW31_15455;Dbxref=NCBI_GP:WJH07624.1;Name=WJH07624.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462058.1;locus_tag=PUW31_15455;product=hydrogenase maturation factor HybG;protein_id=WJH07624.1;transl_table=11 CP118128.1 Genbank gene 3172498 3172839 . - . ID=gene-PUW31_15460;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=PUW31_15460 CP118128.1 Protein Homology CDS 3172498 3172839 . - 0 ID=cds-WJH07625.1;Parent=gene-PUW31_15460;Dbxref=NCBI_GP:WJH07625.1;Name=WJH07625.1;Ontology_term=GO:0036211,GO:0008901;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462059.1;locus_tag=PUW31_15460;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WJH07625.1;transl_table=11 CP118128.1 Genbank gene 3172832 3173320 . - . ID=gene-PUW31_15465;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=PUW31_15465 CP118128.1 Protein Homology CDS 3172832 3173320 . - 0 ID=cds-WJH07626.1;Parent=gene-PUW31_15465;Dbxref=NCBI_GP:WJH07626.1;Name=WJH07626.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462060.1;locus_tag=PUW31_15465;product=hydrogenase-2 assembly chaperone;protein_id=WJH07626.1;transl_table=11 CP118128.1 Genbank gene 3173313 3173807 . - . ID=gene-PUW31_15470;Name=PUW31_15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15470 CP118128.1 Protein Homology CDS 3173313 3173807 . - 0 ID=cds-WJH07627.1;Parent=gene-PUW31_15470;Dbxref=NCBI_GP:WJH07627.1;Name=WJH07627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462061.1;locus_tag=PUW31_15470;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WJH07627.1;transl_table=11 CP118128.1 Genbank gene 3173807 3175510 . - . ID=gene-PUW31_15475;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=PUW31_15475 CP118128.1 Protein Homology CDS 3173807 3175510 . - 0 ID=cds-WJH07628.1;Parent=gene-PUW31_15475;Dbxref=NCBI_GP:WJH07628.1;Name=WJH07628.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462062.1;locus_tag=PUW31_15475;product=hydrogenase 2 large subunit;protein_id=WJH07628.1;transl_table=11 CP118128.1 Genbank gene 3175507 3176685 . - . ID=gene-PUW31_15480;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=PUW31_15480 CP118128.1 Protein Homology CDS 3175507 3176685 . - 0 ID=cds-WJH07629.1;Parent=gene-PUW31_15480;Dbxref=NCBI_GP:WJH07629.1;Name=WJH07629.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462063.1;locus_tag=PUW31_15480;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WJH07629.1;transl_table=11 CP118128.1 Genbank gene 3176675 3177661 . - . ID=gene-PUW31_15485;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=PUW31_15485 CP118128.1 Protein Homology CDS 3176675 3177661 . - 0 ID=cds-WJH07630.1;Parent=gene-PUW31_15485;Dbxref=NCBI_GP:WJH07630.1;Name=WJH07630.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462064.1;locus_tag=PUW31_15485;product=hydrogenase 2 operon protein HybA;protein_id=WJH07630.1;transl_table=11 CP118128.1 Genbank gene 3177664 3178782 . - . ID=gene-PUW31_15490;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=PUW31_15490 CP118128.1 Protein Homology CDS 3177664 3178782 . - 0 ID=cds-WJH07631.1;Parent=gene-PUW31_15490;Dbxref=NCBI_GP:WJH07631.1;Name=WJH07631.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462065.1;locus_tag=PUW31_15490;product=hydrogenase 2 small subunit;protein_id=WJH07631.1;transl_table=11 CP118128.1 Genbank gene 3178972 3179259 . - . ID=gene-PUW31_15495;Name=PUW31_15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15495 CP118128.1 Protein Homology CDS 3178972 3179259 . - 0 ID=cds-WJH07632.1;Parent=gene-PUW31_15495;Dbxref=NCBI_GP:WJH07632.1;Name=WJH07632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462066.1;locus_tag=PUW31_15495;product=DUF2623 family protein;protein_id=WJH07632.1;transl_table=11 CP118128.1 Genbank pseudogene 3179344 3180986 . - . ID=gene-PUW31_15500;Name=PUW31_15500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_15500;pseudo=true CP118128.1 Protein Homology CDS 3179344 3180986 . - 0 ID=cds-PUW31_15500;Parent=gene-PUW31_15500;Note=frameshifted;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462067.1;locus_tag=PUW31_15500;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 3181293 3181786 . - . ID=gene-PUW31_15505;Name=PUW31_15505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_15505;pseudo=true CP118128.1 Protein Homology CDS 3181293 3181786 . - 0 ID=cds-PUW31_15505;Parent=gene-PUW31_15505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462068.1;locus_tag=PUW31_15505;product=TIGR00645 family protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 3182066 3182589 . - . ID=gene-PUW31_15510;Name=PUW31_15510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_15510;pseudo=true CP118128.1 Protein Homology CDS 3182066 3182589 . - 0 ID=cds-PUW31_15510;Parent=gene-PUW31_15510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462069.1;locus_tag=PUW31_15510;product=RNA helicase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3182681 3183091 . + . ID=gene-PUW31_15515;Name=PUW31_15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15515 CP118128.1 Protein Homology CDS 3182681 3183091 . + 0 ID=cds-WJH07633.1;Parent=gene-PUW31_15515;Dbxref=NCBI_GP:WJH07633.1;Name=WJH07633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462070.1;locus_tag=PUW31_15515;product=hypothetical protein;protein_id=WJH07633.1;transl_table=11 CP118128.1 Genbank gene 3183078 3183482 . + . ID=gene-PUW31_15520;Name=PUW31_15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15520 CP118128.1 Protein Homology CDS 3183078 3183482 . + 0 ID=cds-WJH07634.1;Parent=gene-PUW31_15520;Dbxref=NCBI_GP:WJH07634.1;Name=WJH07634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462071.1;locus_tag=PUW31_15520;product=cytoplasmic protein;protein_id=WJH07634.1;transl_table=11 CP118128.1 Genbank gene 3183606 3184490 . + . ID=gene-PUW31_15525;Name=PUW31_15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15525 CP118128.1 Protein Homology CDS 3183606 3184490 . + 0 ID=cds-WJH07635.1;Parent=gene-PUW31_15525;Dbxref=NCBI_GP:WJH07635.1;Name=WJH07635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462072.1;locus_tag=PUW31_15525;product=SDR family oxidoreductase;protein_id=WJH07635.1;transl_table=11 CP118128.1 Genbank pseudogene 3184603 3185027 . - . ID=gene-PUW31_15530;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=pseudogene;locus_tag=PUW31_15530;pseudo=true CP118128.1 Protein Homology CDS 3184603 3185027 . - 0 ID=cds-PUW31_15530;Parent=gene-PUW31_15530;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462073.1;locus_tag=PUW31_15530;product=TonB system transport protein ExbD;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3185034 3185768 . - . ID=gene-PUW31_15535;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=PUW31_15535 CP118128.1 Protein Homology CDS 3185034 3185768 . - 0 ID=cds-WJH07636.1;Parent=gene-PUW31_15535;Dbxref=NCBI_GP:WJH07636.1;Name=WJH07636.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462074.1;locus_tag=PUW31_15535;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WJH07636.1;transl_table=11 CP118128.1 Genbank gene 3186020 3187207 . + . ID=gene-PUW31_15540;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=PUW31_15540 CP118128.1 Protein Homology CDS 3186020 3187207 . + 0 ID=cds-WJH07637.1;Parent=gene-PUW31_15540;Dbxref=NCBI_GP:WJH07637.1;Name=WJH07637.1;Ontology_term=GO:0006520,GO:0019346,GO:0004121,GO:0030170;gbkey=CDS;gene=metC;go_function=cystathionine beta-lyase activity|0004121||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462076.1;locus_tag=PUW31_15540;product=cystathionine beta-lyase;protein_id=WJH07637.1;transl_table=11 CP118128.1 Genbank gene 3187347 3188006 . + . ID=gene-PUW31_15545;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=PUW31_15545 CP118128.1 Protein Homology CDS 3187347 3188006 . + 0 ID=cds-WJH07638.1;Parent=gene-PUW31_15545;Dbxref=NCBI_GP:WJH07638.1;Name=WJH07638.1;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462077.1;locus_tag=PUW31_15545;product=DedA family general envelope maintenance protein YghB;protein_id=WJH07638.1;transl_table=11 CP118128.1 Genbank gene 3188070 3188969 . - . ID=gene-PUW31_15550;Name=PUW31_15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15550 CP118128.1 Protein Homology CDS 3188070 3188969 . - 0 ID=cds-WJH10760.1;Parent=gene-PUW31_15550;Dbxref=NCBI_GP:WJH10760.1;Name=WJH10760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=PUW31_15550;product=AraC family transcriptional regulator;protein_id=WJH10760.1;transl_table=11 CP118128.1 Genbank gene 3189161 3190324 . + . ID=gene-PUW31_15555;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=PUW31_15555 CP118128.1 Protein Homology CDS 3189161 3190324 . + 0 ID=cds-WJH07639.1;Parent=gene-PUW31_15555;Dbxref=NCBI_GP:WJH07639.1;Name=WJH07639.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462079.1;locus_tag=PUW31_15555;product=alcohol dehydrogenase;protein_id=WJH07639.1;transl_table=11 CP118128.1 Genbank pseudogene 3190430 3191256 . + . ID=gene-PUW31_15560;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=pseudogene;locus_tag=PUW31_15560;pseudo=true CP118128.1 Protein Homology CDS 3190430 3191256 . + 0 ID=cds-PUW31_15560;Parent=gene-PUW31_15560;Note=frameshifted;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462080.1;locus_tag=PUW31_15560;product=2%2C5-didehydrogluconate reductase DkgA;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 3191412 3192897 . + . ID=gene-PUW31_15565;Name=PUW31_15565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_15565;pseudo=true CP118128.1 Protein Homology CDS 3191412 3192897 . + 0 ID=cds-PUW31_15565;Parent=gene-PUW31_15565;Note=frameshifted;Ontology_term=GO:0006820,GO:0008509,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462081.3;locus_tag=PUW31_15565;product=DASS family sodium-coupled anion symporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3192942 3193397 . + . ID=gene-PUW31_15570;Name=PUW31_15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15570 CP118128.1 Protein Homology CDS 3192942 3193397 . + 0 ID=cds-WJH07640.1;Parent=gene-PUW31_15570;Dbxref=NCBI_GP:WJH07640.1;Name=WJH07640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462082.1;locus_tag=PUW31_15570;product=HIT family protein;protein_id=WJH07640.1;transl_table=11 CP118128.1 Genbank gene 3193555 3193749 . - . ID=gene-PUW31_15575;Name=PUW31_15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15575 CP118128.1 GeneMarkS-2+ CDS 3193555 3193749 . - 0 ID=cds-WJH07641.1;Parent=gene-PUW31_15575;Dbxref=NCBI_GP:WJH07641.1;Name=WJH07641.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_15575;product=hypothetical protein;protein_id=WJH07641.1;transl_table=11 CP118128.1 Genbank pseudogene 3193952 3196122 . - . ID=gene-PUW31_15580;Name=PUW31_15580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_15580;pseudo=true CP118128.1 Protein Homology CDS 3193952 3196122 . - 0 ID=cds-PUW31_15580;Parent=gene-PUW31_15580;Note=frameshifted;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462083.1;locus_tag=PUW31_15580;product=YgiQ family radical SAM protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3196609 3197592 . + . ID=gene-PUW31_15585;Name=PUW31_15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15585 CP118128.1 Protein Homology CDS 3196609 3197592 . + 0 ID=cds-WJH07642.1;Parent=gene-PUW31_15585;Dbxref=NCBI_GP:WJH07642.1;Name=WJH07642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462084.1;locus_tag=PUW31_15585;product=TRAP transporter substrate-binding protein;protein_id=WJH07642.1;transl_table=11 CP118128.1 Genbank gene 3197634 3198116 . + . ID=gene-PUW31_15590;Name=PUW31_15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15590 CP118128.1 Protein Homology CDS 3197634 3198116 . + 0 ID=cds-WJH07643.1;Parent=gene-PUW31_15590;Dbxref=NCBI_GP:WJH07643.1;Name=WJH07643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462085.1;locus_tag=PUW31_15590;product=TRAP transporter small permease;protein_id=WJH07643.1;transl_table=11 CP118128.1 Genbank gene 3198127 3199434 . + . ID=gene-PUW31_15595;Name=PUW31_15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15595 CP118128.1 Protein Homology CDS 3198127 3199434 . + 0 ID=cds-WJH07644.1;Parent=gene-PUW31_15595;Dbxref=NCBI_GP:WJH07644.1;Name=WJH07644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462086.1;locus_tag=PUW31_15595;product=TRAP transporter large permease subunit;protein_id=WJH07644.1;transl_table=11 CP118128.1 Genbank gene 3199478 3200890 . - . ID=gene-PUW31_15600;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=PUW31_15600 CP118128.1 Protein Homology CDS 3199478 3200890 . - 0 ID=cds-WJH07645.1;Parent=gene-PUW31_15600;Dbxref=NCBI_GP:WJH07645.1;Name=WJH07645.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462087.1;locus_tag=PUW31_15600;product=cell division protein FtsP;protein_id=WJH07645.1;transl_table=11 CP118128.1 Genbank gene 3200964 3201701 . - . ID=gene-PUW31_15605;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=PUW31_15605 CP118128.1 Protein Homology CDS 3200964 3201701 . - 0 ID=cds-WJH07646.1;Parent=gene-PUW31_15605;Dbxref=NCBI_GP:WJH07646.1;Name=WJH07646.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462088.1;locus_tag=PUW31_15605;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WJH07646.1;transl_table=11 CP118128.1 Genbank gene 3201958 3204216 . - . ID=gene-PUW31_15610;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=PUW31_15610 CP118128.1 Protein Homology CDS 3201958 3204216 . - 0 ID=cds-WJH07647.1;Parent=gene-PUW31_15610;Dbxref=NCBI_GP:WJH07647.1;Name=WJH07647.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462089.1;locus_tag=PUW31_15610;product=DNA topoisomerase IV subunit A;protein_id=WJH07647.1;transl_table=11 CP118128.1 Genbank pseudogene 3204327 3205193 . - . ID=gene-PUW31_15615;Name=PUW31_15615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_15615;pseudo=true CP118128.1 Protein Homology CDS 3204327 3205193 . - 0 ID=cds-PUW31_15615;Parent=gene-PUW31_15615;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462090.1;locus_tag=PUW31_15615;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3205265 3205657 . - . ID=gene-PUW31_15620;Name=PUW31_15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15620 CP118128.1 Protein Homology CDS 3205265 3205657 . - 0 ID=cds-WJH07648.1;Parent=gene-PUW31_15620;Dbxref=NCBI_GP:WJH07648.1;Name=WJH07648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462091.1;locus_tag=PUW31_15620;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WJH07648.1;transl_table=11 CP118128.1 Genbank gene 3205809 3206468 . + . ID=gene-PUW31_15625;Name=PUW31_15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15625 CP118128.1 Protein Homology CDS 3205809 3206468 . + 0 ID=cds-WJH07649.1;Parent=gene-PUW31_15625;Dbxref=NCBI_GP:WJH07649.1;Name=WJH07649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462092.1;locus_tag=PUW31_15625;product=two-component system response regulator QseB;protein_id=WJH07649.1;transl_table=11 CP118128.1 Genbank gene 3206465 3207814 . + . ID=gene-PUW31_15630;Name=PUW31_15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15630 CP118128.1 Protein Homology CDS 3206465 3207814 . + 0 ID=cds-WJH07650.1;Parent=gene-PUW31_15630;Dbxref=NCBI_GP:WJH07650.1;Name=WJH07650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462093.1;locus_tag=PUW31_15630;product=two-component system sensor histidine kinase QseC;protein_id=WJH07650.1;transl_table=11 CP118128.1 Genbank gene 3207921 3208502 . + . ID=gene-PUW31_15635;Name=PUW31_15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15635 CP118128.1 Protein Homology CDS 3207921 3208502 . + 0 ID=cds-WJH07651.1;Parent=gene-PUW31_15635;Dbxref=NCBI_GP:WJH07651.1;Name=WJH07651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462094.1;locus_tag=PUW31_15635;product=NAD(P)H-dependent oxidoreductase;protein_id=WJH07651.1;transl_table=11 CP118128.1 Genbank gene 3208534 3208848 . + . ID=gene-PUW31_15640;Name=PUW31_15640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15640 CP118128.1 Protein Homology CDS 3208534 3208848 . + 0 ID=cds-WJH07652.1;Parent=gene-PUW31_15640;Dbxref=NCBI_GP:WJH07652.1;Name=WJH07652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462095.1;locus_tag=PUW31_15640;product=putative quinol monooxygenase;protein_id=WJH07652.1;transl_table=11 CP118128.1 Genbank gene 3208973 3210865 . - . ID=gene-PUW31_15645;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=PUW31_15645 CP118128.1 Protein Homology CDS 3208973 3210865 . - 0 ID=cds-WJH07653.1;Parent=gene-PUW31_15645;Dbxref=NCBI_GP:WJH07653.1;Name=WJH07653.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parE;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462096.1;locus_tag=PUW31_15645;product=DNA topoisomerase IV subunit B;protein_id=WJH07653.1;transl_table=11 CP118128.1 Genbank gene 3210893 3211474 . - . ID=gene-PUW31_15650;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=PUW31_15650 CP118128.1 Protein Homology CDS 3210893 3211474 . - 0 ID=cds-WJH07654.1;Parent=gene-PUW31_15650;Dbxref=NCBI_GP:WJH07654.1;Name=WJH07654.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462097.1;locus_tag=PUW31_15650;product=esterase YqiA;protein_id=WJH07654.1;transl_table=11 CP118128.1 Genbank gene 3211474 3212301 . - . ID=gene-PUW31_15655;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=PUW31_15655 CP118128.1 Protein Homology CDS 3211474 3212301 . - 0 ID=cds-WJH07655.1;Parent=gene-PUW31_15655;Dbxref=NCBI_GP:WJH07655.1;Name=WJH07655.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462098.1;locus_tag=PUW31_15655;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WJH07655.1;transl_table=11 CP118128.1 Genbank gene 3212326 3212748 . - . ID=gene-PUW31_15660;Name=PUW31_15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15660 CP118128.1 Protein Homology CDS 3212326 3212748 . - 0 ID=cds-WJH07656.1;Parent=gene-PUW31_15660;Dbxref=NCBI_GP:WJH07656.1;Name=WJH07656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462099.1;locus_tag=PUW31_15660;product=DUF1249 family protein;protein_id=WJH07656.1;transl_table=11 CP118128.1 Genbank gene 3212745 3213377 . - . ID=gene-PUW31_15665;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=PUW31_15665 CP118128.1 Protein Homology CDS 3212745 3213377 . - 0 ID=cds-WJH07657.1;Parent=gene-PUW31_15665;Dbxref=NCBI_GP:WJH07657.1;Name=WJH07657.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462100.1;locus_tag=PUW31_15665;product=ADP-ribose diphosphatase;protein_id=WJH07657.1;transl_table=11 CP118128.1 Genbank gene 3213578 3215053 . + . ID=gene-PUW31_15670;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=PUW31_15670 CP118128.1 Protein Homology CDS 3213578 3215053 . + 0 ID=cds-WJH07658.1;Parent=gene-PUW31_15670;Dbxref=NCBI_GP:WJH07658.1;Name=WJH07658.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462101.3;locus_tag=PUW31_15670;product=outer membrane channel protein TolC;protein_id=WJH07658.1;transl_table=11 CP118128.1 Genbank gene 3215266 3215937 . + . ID=gene-PUW31_15675;Name=PUW31_15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15675 CP118128.1 Protein Homology CDS 3215266 3215937 . + 0 ID=cds-WJH07659.1;Parent=gene-PUW31_15675;Dbxref=NCBI_GP:WJH07659.1;Name=WJH07659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462102.1;locus_tag=PUW31_15675;product=DUF1190 family protein;protein_id=WJH07659.1;transl_table=11 CP118128.1 Genbank gene 3215943 3217106 . + . ID=gene-PUW31_15680;Name=PUW31_15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15680 CP118128.1 Protein Homology CDS 3215943 3217106 . + 0 ID=cds-WJH07660.1;Parent=gene-PUW31_15680;Dbxref=NCBI_GP:WJH07660.1;Name=WJH07660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462103.1;locus_tag=PUW31_15680;product=glutathionylspermidine synthase family protein;protein_id=WJH07660.1;transl_table=11 CP118128.1 Genbank gene 3217168 3217956 . - . ID=gene-PUW31_15685;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=PUW31_15685 CP118128.1 Protein Homology CDS 3217168 3217956 . - 0 ID=cds-WJH07661.1;Parent=gene-PUW31_15685;Dbxref=NCBI_GP:WJH07661.1;Name=WJH07661.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=PUW31_15685;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WJH07661.1;transl_table=11 CP118128.1 Genbank gene 3218097 3218870 . + . ID=gene-PUW31_15690;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=PUW31_15690 CP118128.1 Protein Homology CDS 3218097 3218870 . + 0 ID=cds-WJH07662.1;Parent=gene-PUW31_15690;Dbxref=NCBI_GP:WJH07662.1;Name=WJH07662.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462105.1;locus_tag=PUW31_15690;product=zinc transporter ZupT;protein_id=WJH07662.1;transl_table=11 CP118128.1 Genbank gene 3218937 3219113 . - . ID=gene-PUW31_15695;Name=PUW31_15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15695 CP118128.1 Protein Homology CDS 3218937 3219113 . - 0 ID=cds-WJH07663.1;Parent=gene-PUW31_15695;Dbxref=NCBI_GP:WJH07663.1;Name=WJH07663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=PUW31_15695;product=hypothetical protein;protein_id=WJH07663.1;transl_table=11 CP118128.1 Genbank gene 3219513 3221309 . + . ID=gene-PUW31_15700;Name=PUW31_15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15700 CP118128.1 Protein Homology CDS 3219513 3221309 . + 0 ID=cds-WJH07664.1;Parent=gene-PUW31_15700;Dbxref=NCBI_GP:WJH07664.1;Name=WJH07664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016159766.1;locus_tag=PUW31_15700;product=aryl-sulfate sulfotransferase;protein_id=WJH07664.1;transl_table=11 CP118128.1 Genbank gene 3221329 3222000 . + . ID=gene-PUW31_15705;Name=PUW31_15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15705 CP118128.1 Protein Homology CDS 3221329 3222000 . + 0 ID=cds-WJH07665.1;Parent=gene-PUW31_15705;Dbxref=NCBI_GP:WJH07665.1;Name=WJH07665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462108.1;locus_tag=PUW31_15705;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WJH07665.1;transl_table=11 CP118128.1 Genbank gene 3222015 3222692 . + . ID=gene-PUW31_15710;Name=dsbI;gbkey=Gene;gene=dsbI;gene_biotype=protein_coding;locus_tag=PUW31_15710 CP118128.1 Protein Homology CDS 3222015 3222692 . + 0 ID=cds-WJH07666.1;Parent=gene-PUW31_15710;Dbxref=NCBI_GP:WJH07666.1;Name=WJH07666.1;gbkey=CDS;gene=dsbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462109.1;locus_tag=PUW31_15710;product=protein-disulfide oxidoreductase DsbI;protein_id=WJH07666.1;transl_table=11 CP118128.1 Genbank gene 3222863 3223516 . - . ID=gene-PUW31_15715;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=PUW31_15715 CP118128.1 Protein Homology CDS 3222863 3223516 . - 0 ID=cds-WJH07667.1;Parent=gene-PUW31_15715;Dbxref=NCBI_GP:WJH07667.1;Name=WJH07667.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462110.1;locus_tag=PUW31_15715;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WJH07667.1;transl_table=11 CP118128.1 cmsearch riboswitch 3223622 3223818 . - . ID=id-CP118128.1:3223622..3223818;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118128.1 Genbank gene 3223951 3224247 . + . ID=gene-PUW31_15720;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;locus_tag=PUW31_15720 CP118128.1 Protein Homology CDS 3223951 3224247 . + 0 ID=cds-WJH07668.1;Parent=gene-PUW31_15720;Dbxref=NCBI_GP:WJH07668.1;Name=WJH07668.1;gbkey=CDS;gene=ubiK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566826.1;locus_tag=PUW31_15720;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WJH07668.1;transl_table=11 CP118128.1 Genbank gene 3224322 3224531 . - . ID=gene-PUW31_15725;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=PUW31_15725 CP118128.1 Protein Homology CDS 3224322 3224531 . - 0 ID=cds-WJH07669.1;Parent=gene-PUW31_15725;Dbxref=NCBI_GP:WJH07669.1;Name=WJH07669.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462112.1;locus_tag=PUW31_15725;product=cell surface composition regulator GlgS;protein_id=WJH07669.1;transl_table=11 CP118128.1 Genbank gene 3224789 3225409 . + . ID=gene-PUW31_15730;Name=PUW31_15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15730 CP118128.1 Protein Homology CDS 3224789 3225409 . + 0 ID=cds-WJH07670.1;Parent=gene-PUW31_15730;Dbxref=NCBI_GP:WJH07670.1;Name=WJH07670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462113.1;locus_tag=PUW31_15730;product=DUF1449 family protein;protein_id=WJH07670.1;transl_table=11 CP118128.1 Genbank gene 3225428 3227107 . + . ID=gene-PUW31_15735;Name=PUW31_15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15735 CP118128.1 Protein Homology CDS 3225428 3227107 . + 0 ID=cds-WJH07671.1;Parent=gene-PUW31_15735;Dbxref=NCBI_GP:WJH07671.1;Name=WJH07671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462114.1;locus_tag=PUW31_15735;product=flotillin family protein;protein_id=WJH07671.1;transl_table=11 CP118128.1 Genbank gene 3227347 3227406 . + . ID=gene-PUW31_15740;Name=PUW31_15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15740 CP118128.1 Protein Homology CDS 3227347 3227406 . + 0 ID=cds-WJH10761.1;Parent=gene-PUW31_15740;Dbxref=NCBI_GP:WJH10761.1;Name=WJH10761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=PUW31_15740;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WJH10761.1;transl_table=11 CP118128.1 Genbank gene 3227566 3228999 . - . ID=gene-PUW31_15745;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=PUW31_15745 CP118128.1 Protein Homology CDS 3227566 3228999 . - 0 ID=cds-WJH07672.1;Parent=gene-PUW31_15745;Dbxref=NCBI_GP:WJH07672.1;Name=WJH07672.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462115.1;locus_tag=PUW31_15745;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WJH07672.1;transl_table=11 CP118128.1 Genbank pseudogene 3229047 3231888 . - . ID=gene-PUW31_15750;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=pseudogene;locus_tag=PUW31_15750;pseudo=true CP118128.1 Protein Homology CDS 3229047 3231888 . - 0 ID=cds-PUW31_15750;Parent=gene-PUW31_15750;Note=frameshifted;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462116.1;locus_tag=PUW31_15750;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3232006 3233307 . - . ID=gene-PUW31_15755;Name=PUW31_15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15755 CP118128.1 Protein Homology CDS 3232006 3233307 . - 0 ID=cds-WJH07673.1;Parent=gene-PUW31_15755;Dbxref=NCBI_GP:WJH07673.1;Name=WJH07673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462117.1;locus_tag=PUW31_15755;product=inorganic triphosphatase;protein_id=WJH07673.1;transl_table=11 CP118128.1 Genbank gene 3233549 3234163 . + . ID=gene-PUW31_15760;Name=PUW31_15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15760 CP118128.1 Protein Homology CDS 3233549 3234163 . + 0 ID=cds-WJH07674.1;Parent=gene-PUW31_15760;Dbxref=NCBI_GP:WJH07674.1;Name=WJH07674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462118.1;locus_tag=PUW31_15760;product=TIGR04211 family SH3 domain-containing protein;protein_id=WJH07674.1;transl_table=11 CP118128.1 Genbank gene 3234226 3235467 . + . ID=gene-PUW31_15765;Name=PUW31_15765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15765 CP118128.1 Protein Homology CDS 3234226 3235467 . + 0 ID=cds-WJH07675.1;Parent=gene-PUW31_15765;Dbxref=NCBI_GP:WJH07675.1;Name=WJH07675.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462119.1;locus_tag=PUW31_15765;product=multifunctional CCA addition/repair protein;protein_id=WJH07675.1;transl_table=11 CP118128.1 Genbank gene 3235571 3236392 . - . ID=gene-PUW31_15770;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=PUW31_15770 CP118128.1 Protein Homology CDS 3235571 3236392 . - 0 ID=cds-WJH07676.1;Parent=gene-PUW31_15770;Dbxref=NCBI_GP:WJH07676.1;Name=WJH07676.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=PUW31_15770;product=undecaprenyl-diphosphate phosphatase;protein_id=WJH07676.1;transl_table=11 CP118128.1 Genbank gene 3236490 3236849 . - . ID=gene-PUW31_15775;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=PUW31_15775 CP118128.1 Protein Homology CDS 3236490 3236849 . - 0 ID=cds-WJH07677.1;Parent=gene-PUW31_15775;Dbxref=NCBI_GP:WJH07677.1;Name=WJH07677.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681574.1;locus_tag=PUW31_15775;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WJH07677.1;transl_table=11 CP118128.1 Genbank gene 3236956 3237567 . + . ID=gene-PUW31_15780;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=PUW31_15780 CP118128.1 Protein Homology CDS 3236956 3237567 . + 0 ID=cds-WJH07678.1;Parent=gene-PUW31_15780;Dbxref=NCBI_GP:WJH07678.1;Name=WJH07678.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462122.1;locus_tag=PUW31_15780;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WJH07678.1;transl_table=11 CP118128.1 Genbank pseudogene 3237566 3237694 . + . ID=gene-PUW31_15785;Name=PUW31_15785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_15785;pseudo=true CP118128.1 Protein Homology CDS 3237566 3237694 . + 0 ID=cds-PUW31_15785;Parent=gene-PUW31_15785;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311971.1;locus_tag=PUW31_15785;product=fumarate hydratase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3237817 3238830 . - . ID=gene-PUW31_15790;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=PUW31_15790 CP118128.1 Protein Homology CDS 3237817 3238830 . - 0 ID=cds-WJH07679.1;Parent=gene-PUW31_15790;Dbxref=NCBI_GP:WJH07679.1;Name=WJH07679.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=PUW31_15790;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WJH07679.1;transl_table=11 CP118128.1 Genbank gene 3239058 3239273 . + . ID=gene-PUW31_15795;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=PUW31_15795 CP118128.1 Protein Homology CDS 3239058 3239273 . + 0 ID=cds-WJH07680.1;Parent=gene-PUW31_15795;Dbxref=NCBI_GP:WJH07680.1;Name=WJH07680.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=PUW31_15795;product=30S ribosomal protein S21;protein_id=WJH07680.1;transl_table=11 CP118128.1 Genbank gene 3239508 3241253 . + . ID=gene-PUW31_15800;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=PUW31_15800 CP118128.1 Protein Homology CDS 3239508 3241253 . + 0 ID=cds-WJH07681.1;Parent=gene-PUW31_15800;Dbxref=NCBI_GP:WJH07681.1;Name=WJH07681.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462125.1;locus_tag=PUW31_15800;product=DNA primase;protein_id=WJH07681.1;transl_table=11 CP118128.1 Genbank gene 3241268 3243250 . + . ID=gene-PUW31_15805;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=PUW31_15805 CP118128.1 Protein Homology CDS 3241268 3243250 . + 0 ID=cds-WJH07682.1;Parent=gene-PUW31_15805;Dbxref=NCBI_GP:WJH07682.1;Name=WJH07682.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF004208.0;locus_tag=PUW31_15805;product=RNA polymerase sigma factor RpoD;protein_id=WJH07682.1;transl_table=11 CP118128.1 Genbank gene 3243374 3243880 . - . ID=gene-PUW31_15810;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=PUW31_15810 CP118128.1 Protein Homology CDS 3243374 3243880 . - 0 ID=cds-WJH07683.1;Parent=gene-PUW31_15810;Dbxref=NCBI_GP:WJH07683.1;Name=WJH07683.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462127.1;locus_tag=PUW31_15810;product=G/U mismatch-specific DNA glycosylase;protein_id=WJH07683.1;transl_table=11 CP118128.1 Genbank gene 3244006 3244081 . + . ID=gene-PUW31_15815;Name=PUW31_15815;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_15815 CP118128.1 tRNAscan-SE tRNA 3244006 3244081 . + . ID=rna-PUW31_15815;Parent=gene-PUW31_15815;anticodon=(pos:3244039..3244041);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_15815;product=tRNA-Ile CP118128.1 tRNAscan-SE exon 3244006 3244081 . + . ID=exon-PUW31_15815-1;Parent=rna-PUW31_15815;anticodon=(pos:3244039..3244041);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_15815;product=tRNA-Ile CP118128.1 Genbank gene 3244161 3244928 . - . ID=gene-PUW31_15820;Name=PUW31_15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15820 CP118128.1 Protein Homology CDS 3244161 3244928 . - 0 ID=cds-WJH07684.1;Parent=gene-PUW31_15820;Dbxref=NCBI_GP:WJH07684.1;Name=WJH07684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462128.1;locus_tag=PUW31_15820;product=siderophore-interacting protein;protein_id=WJH07684.1;transl_table=11 CP118128.1 Genbank pseudogene 3245160 3245806 . + . ID=gene-PUW31_15825;Name=PUW31_15825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_15825;pseudo=true CP118128.1 Protein Homology CDS 3245160 3245806 . + 0 ID=cds-PUW31_15825;Parent=gene-PUW31_15825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462129.1;locus_tag=PUW31_15825;product=PadR family transcriptional regulator;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3245803 3247371 . - . ID=gene-PUW31_15830;Name=PUW31_15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15830 CP118128.1 Protein Homology CDS 3245803 3247371 . - 0 ID=cds-WJH07685.1;Parent=gene-PUW31_15830;Dbxref=NCBI_GP:WJH07685.1;Name=WJH07685.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462130.1;locus_tag=PUW31_15830;product=methyl-accepting chemotaxis protein;protein_id=WJH07685.1;transl_table=11 CP118128.1 Genbank gene 3247758 3249278 . - . ID=gene-PUW31_15835;Name=PUW31_15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15835 CP118128.1 Protein Homology CDS 3247758 3249278 . - 0 ID=cds-WJH07686.1;Parent=gene-PUW31_15835;Dbxref=NCBI_GP:WJH07686.1;Name=WJH07686.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462131.1;locus_tag=PUW31_15835;product=methyl-accepting chemotaxis protein;protein_id=WJH07686.1;transl_table=11 CP118128.1 Genbank gene 3249708 3251087 . + . ID=gene-PUW31_15840;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=PUW31_15840 CP118128.1 Protein Homology CDS 3249708 3251087 . + 0 ID=cds-WJH07687.1;Parent=gene-PUW31_15840;Dbxref=NCBI_GP:WJH07687.1;Name=WJH07687.1;Ontology_term=GO:0009447,GO:0033094;gbkey=CDS;gene=ygjG;go_function=butane-1%2C4-diamine:2-oxoglutarate aminotransferase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894971.1;locus_tag=PUW31_15840;product=putrescine aminotransferase;protein_id=WJH07687.1;transl_table=11 CP118128.1 Genbank gene 3251258 3253276 . + . ID=gene-PUW31_15845;Name=PUW31_15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15845 CP118128.1 Protein Homology CDS 3251258 3253276 . + 0 ID=cds-WJH07688.1;Parent=gene-PUW31_15845;Dbxref=NCBI_GP:WJH07688.1;Name=WJH07688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462133.1;locus_tag=PUW31_15845;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WJH07688.1;transl_table=11 CP118128.1 Genbank gene 3253357 3254493 . - . ID=gene-PUW31_15850;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=PUW31_15850 CP118128.1 Protein Homology CDS 3253357 3254493 . - 0 ID=cds-WJH07689.1;Parent=gene-PUW31_15850;Dbxref=NCBI_GP:WJH07689.1;Name=WJH07689.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462134.1;locus_tag=PUW31_15850;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WJH07689.1;transl_table=11 CP118128.1 Genbank gene 3254579 3255076 . + . ID=gene-PUW31_15855;Name=PUW31_15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15855 CP118128.1 Protein Homology CDS 3254579 3255076 . + 0 ID=cds-WJH07690.1;Parent=gene-PUW31_15855;Dbxref=NCBI_GP:WJH07690.1;Name=WJH07690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462135.1;locus_tag=PUW31_15855;product=M48 family metallopeptidase;protein_id=WJH07690.1;transl_table=11 CP118128.1 Genbank gene 3255228 3255920 . + . ID=gene-PUW31_15860;Name=PUW31_15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15860 CP118128.1 Protein Homology CDS 3255228 3255920 . + 0 ID=cds-WJH07691.1;Parent=gene-PUW31_15860;Dbxref=NCBI_GP:WJH07691.1;Name=WJH07691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462136.1;locus_tag=PUW31_15860;product=vancomycin high temperature exclusion protein;protein_id=WJH07691.1;transl_table=11 CP118128.1 Genbank pseudogene 3256009 3257007 . + . ID=gene-PUW31_15865;Name=PUW31_15865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_15865;pseudo=true CP118128.1 Protein Homology CDS 3256009 3257007 . + 0 ID=cds-PUW31_15865;Parent=gene-PUW31_15865;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462137.1;locus_tag=PUW31_15865;product=Gfo/Idh/MocA family oxidoreductase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3257277 3258245 . + . ID=gene-PUW31_15870;Name=PUW31_15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15870 CP118128.1 Protein Homology CDS 3257277 3258245 . + 0 ID=cds-WJH10762.1;Parent=gene-PUW31_15870;Dbxref=NCBI_GP:WJH10762.1;Name=WJH10762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462138.1;locus_tag=PUW31_15870;product=TerC family protein;protein_id=WJH10762.1;transl_table=11 CP118128.1 Genbank pseudogene 3258499 3259743 . + . ID=gene-PUW31_15875;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=pseudogene;locus_tag=PUW31_15875;pseudo=true CP118128.1 Protein Homology CDS 3258499 3259743 . + 0 ID=cds-PUW31_15875;Parent=gene-PUW31_15875;Note=internal stop;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462139.1;locus_tag=PUW31_15875;product=serine/threonine transporter SstT;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3260193 3260855 . + . ID=gene-PUW31_15880;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=PUW31_15880 CP118128.1 Protein Homology CDS 3260193 3260855 . + 0 ID=cds-WJH07692.1;Parent=gene-PUW31_15880;Dbxref=NCBI_GP:WJH07692.1;Name=WJH07692.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462140.1;locus_tag=PUW31_15880;product=DedA family general envelope maintenance protein YqjA;protein_id=WJH07692.1;transl_table=11 CP118128.1 Genbank gene 3260859 3261242 . + . ID=gene-PUW31_15885;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=PUW31_15885 CP118128.1 Protein Homology CDS 3260859 3261242 . + 0 ID=cds-WJH07693.1;Parent=gene-PUW31_15885;Dbxref=NCBI_GP:WJH07693.1;Name=WJH07693.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462141.1;locus_tag=PUW31_15885;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WJH07693.1;transl_table=11 CP118128.1 Genbank gene 3261387 3261755 . + . ID=gene-PUW31_15890;Name=PUW31_15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15890 CP118128.1 Protein Homology CDS 3261387 3261755 . + 0 ID=cds-WJH07694.1;Parent=gene-PUW31_15890;Dbxref=NCBI_GP:WJH07694.1;Name=WJH07694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462142.1;locus_tag=PUW31_15890;product=DUF1090 domain-containing protein;protein_id=WJH07694.1;transl_table=11 CP118128.1 Genbank gene 3261797 3262102 . + . ID=gene-PUW31_15895;Name=PUW31_15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15895 CP118128.1 Protein Homology CDS 3261797 3262102 . + 0 ID=cds-WJH07695.1;Parent=gene-PUW31_15895;Dbxref=NCBI_GP:WJH07695.1;Name=WJH07695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462143.1;locus_tag=PUW31_15895;product=YqjD family protein;protein_id=WJH07695.1;transl_table=11 CP118128.1 Genbank gene 3262105 3262503 . + . ID=gene-PUW31_15900;Name=PUW31_15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15900 CP118128.1 Protein Homology CDS 3262105 3262503 . + 0 ID=cds-WJH07696.1;Parent=gene-PUW31_15900;Dbxref=NCBI_GP:WJH07696.1;Name=WJH07696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462144.1;locus_tag=PUW31_15900;product=phage holin family protein;protein_id=WJH07696.1;transl_table=11 CP118128.1 Genbank gene 3262500 3262799 . + . ID=gene-PUW31_15905;Name=PUW31_15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15905 CP118128.1 Protein Homology CDS 3262500 3262799 . + 0 ID=cds-WJH07697.1;Parent=gene-PUW31_15905;Dbxref=NCBI_GP:WJH07697.1;Name=WJH07697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462145.1;locus_tag=PUW31_15905;product=YqjK-like family protein;protein_id=WJH07697.1;transl_table=11 CP118128.1 Genbank gene 3263046 3263438 . + . ID=gene-PUW31_15910;Name=PUW31_15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15910 CP118128.1 Protein Homology CDS 3263046 3263438 . + 0 ID=cds-WJH07698.1;Parent=gene-PUW31_15910;Dbxref=NCBI_GP:WJH07698.1;Name=WJH07698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=PUW31_15910;product=DoxX family protein;protein_id=WJH07698.1;transl_table=11 CP118128.1 Genbank gene 3263506 3264492 . + . ID=gene-PUW31_15915;Name=PUW31_15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15915 CP118128.1 Protein Homology CDS 3263506 3264492 . + 0 ID=cds-WJH07699.1;Parent=gene-PUW31_15915;Dbxref=NCBI_GP:WJH07699.1;Name=WJH07699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462147.1;locus_tag=PUW31_15915;product=glutathione S-transferase family protein;protein_id=WJH07699.1;transl_table=11 CP118128.1 Genbank gene 3264616 3264981 . + . ID=gene-PUW31_15920;Name=PUW31_15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15920 CP118128.1 Protein Homology CDS 3264616 3264981 . + 0 ID=cds-WJH07700.1;Parent=gene-PUW31_15920;Dbxref=NCBI_GP:WJH07700.1;Name=WJH07700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462148.1;locus_tag=PUW31_15920;product=DUF805 domain-containing protein;protein_id=WJH07700.1;transl_table=11 CP118128.1 Genbank gene 3265020 3265916 . - . ID=gene-PUW31_15925;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=PUW31_15925 CP118128.1 Protein Homology CDS 3265020 3265916 . - 0 ID=cds-WJH07701.1;Parent=gene-PUW31_15925;Dbxref=NCBI_GP:WJH07701.1;Name=WJH07701.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462149.1;locus_tag=PUW31_15925;product=DNA-binding transcriptional regulator YhaJ;protein_id=WJH07701.1;transl_table=11 CP118128.1 Genbank gene 3266021 3266722 . + . ID=gene-PUW31_15930;Name=PUW31_15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15930 CP118128.1 Protein Homology CDS 3266021 3266722 . + 0 ID=cds-WJH07702.1;Parent=gene-PUW31_15930;Dbxref=NCBI_GP:WJH07702.1;Name=WJH07702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462150.1;locus_tag=PUW31_15930;product=pirin family protein;protein_id=WJH07702.1;transl_table=11 CP118128.1 Genbank gene 3266746 3266910 . + . ID=gene-PUW31_15935;Name=PUW31_15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15935 CP118128.1 Protein Homology CDS 3266746 3266910 . + 0 ID=cds-WJH07703.1;Parent=gene-PUW31_15935;Dbxref=NCBI_GP:WJH07703.1;Name=WJH07703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462151.1;locus_tag=PUW31_15935;product=hypothetical protein;protein_id=WJH07703.1;transl_table=11 CP118128.1 Genbank gene 3267023 3268333 . - . ID=gene-PUW31_15940;Name=PUW31_15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15940 CP118128.1 Protein Homology CDS 3267023 3268333 . - 0 ID=cds-WJH07704.1;Parent=gene-PUW31_15940;Dbxref=NCBI_GP:WJH07704.1;Name=WJH07704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462152.1;locus_tag=PUW31_15940;product=serine dehydratase subunit alpha family protein;protein_id=WJH07704.1;transl_table=11 CP118128.1 Genbank gene 3268359 3269690 . - . ID=gene-PUW31_15945;Name=PUW31_15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_15945 CP118128.1 Protein Homology CDS 3268359 3269690 . - 0 ID=cds-WJH07705.1;Parent=gene-PUW31_15945;Dbxref=NCBI_GP:WJH07705.1;Name=WJH07705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462153.1;locus_tag=PUW31_15945;product=amino acid permease;protein_id=WJH07705.1;transl_table=11 CP118128.1 Genbank pseudogene 3270005 3271368 . - . ID=gene-PUW31_15950;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=pseudogene;locus_tag=PUW31_15950;pseudo=true CP118128.1 Protein Homology CDS 3270005 3271368 . - 0 ID=cds-PUW31_15950;Parent=gene-PUW31_15950;Note=frameshifted;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462154.1;locus_tag=PUW31_15950;product=L-serine ammonia-lyase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 3271438 3273731 . - . ID=gene-PUW31_15955;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=pseudogene;locus_tag=PUW31_15955;pseudo=true CP118128.1 Protein Homology CDS 3271438 3273731 . - 0 ID=cds-PUW31_15955;Parent=gene-PUW31_15955;Note=frameshifted;Ontology_term=GO:0006113,GO:0015942,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=fermentation|0006113||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462155.1;locus_tag=PUW31_15955;product=formate C-acetyltransferase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3273764 3274972 . - . ID=gene-PUW31_15960;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=PUW31_15960 CP118128.1 Protein Homology CDS 3273764 3274972 . - 0 ID=cds-WJH07706.1;Parent=gene-PUW31_15960;Dbxref=NCBI_GP:WJH07706.1;Name=WJH07706.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462156.1;locus_tag=PUW31_15960;product=propionate kinase;protein_id=WJH07706.1;transl_table=11 CP118128.1 Genbank gene 3275039 3276370 . - . ID=gene-PUW31_15965;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=PUW31_15965 CP118128.1 Protein Homology CDS 3275039 3276370 . - 0 ID=cds-WJH07707.1;Parent=gene-PUW31_15965;Dbxref=NCBI_GP:WJH07707.1;Name=WJH07707.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462157.1;locus_tag=PUW31_15965;product=threonine/serine transporter TdcC;protein_id=WJH07707.1;transl_table=11 CP118128.1 Genbank gene 3276391 3277380 . - . ID=gene-PUW31_15970;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=PUW31_15970 CP118128.1 Protein Homology CDS 3276391 3277380 . - 0 ID=cds-WJH07708.1;Parent=gene-PUW31_15970;Dbxref=NCBI_GP:WJH07708.1;Name=WJH07708.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=L-threonine ammonia-lyase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462158.1;locus_tag=PUW31_15970;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WJH07708.1;transl_table=11 CP118128.1 Genbank gene 3277478 3278416 . - . ID=gene-PUW31_15975;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=PUW31_15975 CP118128.1 Protein Homology CDS 3277478 3278416 . - 0 ID=cds-WJH07709.1;Parent=gene-PUW31_15975;Dbxref=NCBI_GP:WJH07709.1;Name=WJH07709.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462159.1;locus_tag=PUW31_15975;product=transcriptional regulator TdcA;protein_id=WJH07709.1;transl_table=11 CP118128.1 Genbank gene 3279128 3279502 . - . ID=gene-PUW31_15980;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=PUW31_15980 CP118128.1 cmsearch RNase_P_RNA 3279128 3279502 . - . ID=rna-PUW31_15980;Parent=gene-PUW31_15980;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_15980;product=RNase P RNA component class A CP118128.1 cmsearch exon 3279128 3279502 . - . ID=exon-PUW31_15980-1;Parent=rna-PUW31_15980;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_15980;product=RNase P RNA component class A CP118128.1 Genbank gene 3279535 3280680 . - . ID=gene-PUW31_15985;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=PUW31_15985 CP118128.1 Protein Homology CDS 3279535 3280680 . - 0 ID=cds-WJH07710.1;Parent=gene-PUW31_15985;Dbxref=NCBI_GP:WJH07710.1;Name=WJH07710.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462160.1;locus_tag=PUW31_15985;product=glycerate 2-kinase;protein_id=WJH07710.1;transl_table=11 CP118128.1 Genbank gene 3280778 3281668 . - . ID=gene-PUW31_15990;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=PUW31_15990 CP118128.1 Protein Homology CDS 3280778 3281668 . - 0 ID=cds-WJH07711.1;Parent=gene-PUW31_15990;Dbxref=NCBI_GP:WJH07711.1;Name=WJH07711.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=PUW31_15990;product=2-hydroxy-3-oxopropionate reductase;protein_id=WJH07711.1;transl_table=11 CP118128.1 Genbank gene 3281694 3282464 . - . ID=gene-PUW31_15995;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=PUW31_15995 CP118128.1 Protein Homology CDS 3281694 3282464 . - 0 ID=cds-WJH07712.1;Parent=gene-PUW31_15995;Dbxref=NCBI_GP:WJH07712.1;Name=WJH07712.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462162.1;locus_tag=PUW31_15995;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WJH07712.1;transl_table=11 CP118128.1 Genbank gene 3282994 3284565 . + . ID=gene-PUW31_16000;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=PUW31_16000 CP118128.1 Protein Homology CDS 3282994 3284565 . + 0 ID=cds-WJH07713.1;Parent=gene-PUW31_16000;Dbxref=NCBI_GP:WJH07713.1;Name=WJH07713.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462163.1;locus_tag=PUW31_16000;product=galactarate dehydratase;protein_id=WJH07713.1;transl_table=11 CP118128.1 Genbank gene 3284823 3285677 . + . ID=gene-PUW31_16005;Name=PUW31_16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16005 CP118128.1 Protein Homology CDS 3284823 3285677 . + 0 ID=cds-WJH07714.1;Parent=gene-PUW31_16005;Dbxref=NCBI_GP:WJH07714.1;Name=WJH07714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462166.1;locus_tag=PUW31_16005;product=tagatose bisphosphate family class II aldolase;protein_id=WJH07714.1;transl_table=11 CP118128.1 Genbank gene 3285796 3287067 . + . ID=gene-PUW31_16010;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=PUW31_16010 CP118128.1 Protein Homology CDS 3285796 3287067 . + 0 ID=cds-WJH07715.1;Parent=gene-PUW31_16010;Dbxref=NCBI_GP:WJH07715.1;Name=WJH07715.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462170.1;locus_tag=PUW31_16010;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=WJH07715.1;transl_table=11 CP118128.1 Genbank gene 3287082 3287546 . + . ID=gene-PUW31_16015;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=PUW31_16015 CP118128.1 Protein Homology CDS 3287082 3287546 . + 0 ID=cds-WJH07716.1;Parent=gene-PUW31_16015;Dbxref=NCBI_GP:WJH07716.1;Name=WJH07716.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462171.1;locus_tag=PUW31_16015;product=PTS galactitol transporter subunit IIA;protein_id=WJH07716.1;transl_table=11 CP118128.1 Genbank gene 3287577 3287861 . + . ID=gene-PUW31_16020;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=PUW31_16020 CP118128.1 Protein Homology CDS 3287577 3287861 . + 0 ID=cds-WJH07717.1;Parent=gene-PUW31_16020;Dbxref=NCBI_GP:WJH07717.1;Name=WJH07717.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462172.1;locus_tag=PUW31_16020;product=PTS galactitol transporter subunit IIB;protein_id=WJH07717.1;transl_table=11 CP118128.1 Genbank gene 3287865 3289238 . + . ID=gene-PUW31_16025;Name=PUW31_16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16025 CP118128.1 Protein Homology CDS 3287865 3289238 . + 0 ID=cds-WJH07718.1;Parent=gene-PUW31_16025;Dbxref=NCBI_GP:WJH07718.1;Name=WJH07718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462173.1;locus_tag=PUW31_16025;product=PTS galactitol transporter subunit IIC;protein_id=WJH07718.1;transl_table=11 CP118128.1 Genbank gene 3289282 3290325 . + . ID=gene-PUW31_16030;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=PUW31_16030 CP118128.1 Protein Homology CDS 3289282 3290325 . + 0 ID=cds-WJH07719.1;Parent=gene-PUW31_16030;Dbxref=NCBI_GP:WJH07719.1;Name=WJH07719.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=gatD;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462174.1;locus_tag=PUW31_16030;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WJH07719.1;transl_table=11 CP118128.1 Genbank gene 3290436 3291209 . + . ID=gene-PUW31_16035;Name=PUW31_16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16035 CP118128.1 Protein Homology CDS 3290436 3291209 . + 0 ID=cds-WJH07720.1;Parent=gene-PUW31_16035;Dbxref=NCBI_GP:WJH07720.1;Name=WJH07720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462175.1;locus_tag=PUW31_16035;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WJH07720.1;transl_table=11 CP118128.1 Genbank gene 3291367 3292230 . - . ID=gene-PUW31_16040;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=PUW31_16040 CP118128.1 Protein Homology CDS 3291367 3292230 . - 0 ID=cds-WJH07721.1;Parent=gene-PUW31_16040;Dbxref=NCBI_GP:WJH07721.1;Name=WJH07721.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462176.1;locus_tag=PUW31_16040;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WJH07721.1;transl_table=11 CP118128.1 Genbank gene 3292294 3294336 . + . ID=gene-PUW31_16045;Name=PUW31_16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16045 CP118128.1 Protein Homology CDS 3292294 3294336 . + 0 ID=cds-WJH07722.1;Parent=gene-PUW31_16045;Dbxref=NCBI_GP:WJH07722.1;Name=WJH07722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462177.1;locus_tag=PUW31_16045;product=penicillin-binding protein activator;protein_id=WJH07722.1;transl_table=11 CP118128.1 Genbank gene 3294294 3294689 . + . ID=gene-PUW31_16050;Name=PUW31_16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16050 CP118128.1 Protein Homology CDS 3294294 3294689 . + 0 ID=cds-WJH07723.1;Parent=gene-PUW31_16050;Dbxref=NCBI_GP:WJH07723.1;Name=WJH07723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462178.1;locus_tag=PUW31_16050;product=YraN family protein;protein_id=WJH07723.1;transl_table=11 CP118128.1 Genbank gene 3294711 3295301 . + . ID=gene-PUW31_16055;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=PUW31_16055 CP118128.1 Protein Homology CDS 3294711 3295301 . + 0 ID=cds-WJH07724.1;Parent=gene-PUW31_16055;Dbxref=NCBI_GP:WJH07724.1;Name=WJH07724.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462179.1;locus_tag=PUW31_16055;product=DnaA initiator-associating protein DiaA;protein_id=WJH07724.1;transl_table=11 CP118128.1 Genbank gene 3295311 3295886 . + . ID=gene-PUW31_16060;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=PUW31_16060 CP118128.1 Protein Homology CDS 3295311 3295886 . + 0 ID=cds-WJH07725.1;Parent=gene-PUW31_16060;Dbxref=NCBI_GP:WJH07725.1;Name=WJH07725.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462180.1;locus_tag=PUW31_16060;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WJH07725.1;transl_table=11 CP118128.1 Genbank gene 3295953 3296588 . - . ID=gene-PUW31_16065;Name=PUW31_16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16065 CP118128.1 Protein Homology CDS 3295953 3296588 . - 0 ID=cds-WJH07726.1;Parent=gene-PUW31_16065;Dbxref=NCBI_GP:WJH07726.1;Name=WJH07726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312060.2;locus_tag=PUW31_16065;product=NAD(P)H-binding protein;protein_id=WJH07726.1;transl_table=11 CP118128.1 Genbank gene 3296719 3297237 . + . ID=gene-PUW31_16070;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=PUW31_16070 CP118128.1 Protein Homology CDS 3296719 3297237 . + 0 ID=cds-WJH07727.1;Parent=gene-PUW31_16070;Dbxref=NCBI_GP:WJH07727.1;Name=WJH07727.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462182.1;locus_tag=PUW31_16070;product=protein/nucleic acid deglycase;protein_id=WJH07727.1;transl_table=11 CP118128.1 Genbank gene 3297217 3297660 . - . ID=gene-PUW31_16075;Name=PUW31_16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16075 CP118128.1 Protein Homology CDS 3297217 3297660 . - 0 ID=cds-WJH07728.1;Parent=gene-PUW31_16075;Dbxref=NCBI_GP:WJH07728.1;Name=WJH07728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462183.1;locus_tag=PUW31_16075;product=YhbP family protein;protein_id=WJH07728.1;transl_table=11 CP118128.1 Genbank gene 3297698 3298015 . + . ID=gene-PUW31_16080;Name=PUW31_16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16080 CP118128.1 Protein Homology CDS 3297698 3298015 . + 0 ID=cds-WJH07729.1;Parent=gene-PUW31_16080;Dbxref=NCBI_GP:WJH07729.1;Name=WJH07729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462184.3;locus_tag=PUW31_16080;product=GIY-YIG nuclease family protein;protein_id=WJH07729.1;transl_table=11 CP118128.1 Genbank gene 3298002 3298505 . - . ID=gene-PUW31_16085;Name=PUW31_16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16085 CP118128.1 Protein Homology CDS 3298002 3298505 . - 0 ID=cds-WJH07730.1;Parent=gene-PUW31_16085;Dbxref=NCBI_GP:WJH07730.1;Name=WJH07730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462185.1;locus_tag=PUW31_16085;product=N-acetyltransferase;protein_id=WJH07730.1;transl_table=11 CP118128.1 Genbank gene 3298499 3299023 . - . ID=gene-PUW31_16090;Name=PUW31_16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16090 CP118128.1 Protein Homology CDS 3298499 3299023 . - 0 ID=cds-WJH07731.1;Parent=gene-PUW31_16090;Dbxref=NCBI_GP:WJH07731.1;Name=WJH07731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462186.1;locus_tag=PUW31_16090;product=SCP2 domain-containing protein;protein_id=WJH07731.1;transl_table=11 CP118128.1 Genbank gene 3299240 3300235 . + . ID=gene-PUW31_16095;Name=PUW31_16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16095 CP118128.1 Protein Homology CDS 3299240 3300235 . + 0 ID=cds-WJH07732.1;Parent=gene-PUW31_16095;Dbxref=NCBI_GP:WJH07732.1;Name=WJH07732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=PUW31_16095;product=U32 family peptidase;protein_id=WJH07732.1;transl_table=11 CP118128.1 Genbank gene 3300226 3301122 . + . ID=gene-PUW31_16100;Name=PUW31_16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16100 CP118128.1 Protein Homology CDS 3300226 3301122 . + 0 ID=cds-WJH07733.1;Parent=gene-PUW31_16100;Dbxref=NCBI_GP:WJH07733.1;Name=WJH07733.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462188.3;locus_tag=PUW31_16100;product=U32 family peptidase;protein_id=WJH07733.1;transl_table=11 CP118128.1 Genbank gene 3301300 3302307 . + . ID=gene-PUW31_16105;Name=PUW31_16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16105 CP118128.1 Protein Homology CDS 3301300 3302307 . + 0 ID=cds-WJH07734.1;Parent=gene-PUW31_16105;Dbxref=NCBI_GP:WJH07734.1;Name=WJH07734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462189.1;locus_tag=PUW31_16105;product=LLM class flavin-dependent oxidoreductase;protein_id=WJH07734.1;transl_table=11 CP118128.1 Genbank gene 3302285 3303004 . - . ID=gene-PUW31_16110;Name=PUW31_16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16110 CP118128.1 Protein Homology CDS 3302285 3303004 . - 0 ID=cds-WJH07735.1;Parent=gene-PUW31_16110;Dbxref=NCBI_GP:WJH07735.1;Name=WJH07735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462190.1;locus_tag=PUW31_16110;product=murein L%2CD-transpeptidase;protein_id=WJH07735.1;transl_table=11 CP118128.1 Genbank gene 3303163 3303693 . + . ID=gene-PUW31_16115;Name=PUW31_16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16115 CP118128.1 Protein Homology CDS 3303163 3303693 . + 0 ID=cds-WJH07736.1;Parent=gene-PUW31_16115;Dbxref=NCBI_GP:WJH07736.1;Name=WJH07736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462191.1;locus_tag=PUW31_16115;product=cytoplasmic protein;protein_id=WJH07736.1;transl_table=11 CP118128.1 Genbank gene 3303754 3304998 . - . ID=gene-PUW31_16120;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=PUW31_16120 CP118128.1 Protein Homology CDS 3303754 3304998 . - 0 ID=cds-WJH07737.1;Parent=gene-PUW31_16120;Dbxref=NCBI_GP:WJH07737.1;Name=WJH07737.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462192.1;locus_tag=PUW31_16120;product=tryptophan permease;protein_id=WJH07737.1;transl_table=11 CP118128.1 Genbank gene 3305152 3307008 . - . ID=gene-PUW31_16125;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=PUW31_16125 CP118128.1 Protein Homology CDS 3305152 3307008 . - 0 ID=cds-WJH07738.1;Parent=gene-PUW31_16125;Dbxref=NCBI_GP:WJH07738.1;Name=WJH07738.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312070.2;locus_tag=PUW31_16125;product=ATP-dependent RNA helicase DeaD;protein_id=WJH07738.1;transl_table=11 CP118128.1 Genbank gene 3307001 3307081 . - . ID=gene-PUW31_16130;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=PUW31_16130 CP118128.1 Protein Homology CDS 3307001 3307081 . - 0 ID=cds-WJH10763.1;Parent=gene-PUW31_16130;Dbxref=NCBI_GP:WJH10763.1;Name=WJH10763.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=PUW31_16130;product=protein YrbN;protein_id=WJH10763.1;transl_table=11 CP118128.1 Genbank gene 3307187 3308071 . - . ID=gene-PUW31_16135;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=PUW31_16135 CP118128.1 Protein Homology CDS 3307187 3308071 . - 0 ID=cds-WJH07739.1;Parent=gene-PUW31_16135;Dbxref=NCBI_GP:WJH07739.1;Name=WJH07739.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=PUW31_16135;product=lipoprotein NlpI;protein_id=WJH07739.1;transl_table=11 CP118128.1 Genbank gene 3308181 3310316 . - . ID=gene-PUW31_16140;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=PUW31_16140 CP118128.1 Protein Homology CDS 3308181 3310316 . - 0 ID=cds-WJH10764.1;Parent=gene-PUW31_16140;Dbxref=NCBI_GP:WJH10764.1;Name=WJH10764.1;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462195.1;locus_tag=PUW31_16140;product=polyribonucleotide nucleotidyltransferase;protein_id=WJH10764.1;transl_table=11 CP118128.1 Genbank gene 3310558 3310827 . - . ID=gene-PUW31_16145;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=PUW31_16145 CP118128.1 Protein Homology CDS 3310558 3310827 . - 0 ID=cds-WJH07740.1;Parent=gene-PUW31_16145;Dbxref=NCBI_GP:WJH07740.1;Name=WJH07740.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=PUW31_16145;product=30S ribosomal protein S15;protein_id=WJH07740.1;transl_table=11 CP118128.1 Genbank gene 3310978 3311922 . - . ID=gene-PUW31_16150;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=PUW31_16150 CP118128.1 Protein Homology CDS 3310978 3311922 . - 0 ID=cds-WJH07741.1;Parent=gene-PUW31_16150;Dbxref=NCBI_GP:WJH07741.1;Name=WJH07741.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462197.1;locus_tag=PUW31_16150;product=tRNA pseudouridine(55) synthase TruB;protein_id=WJH07741.1;transl_table=11 CP118128.1 Genbank gene 3311922 3312323 . - . ID=gene-PUW31_16155;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=PUW31_16155 CP118128.1 Protein Homology CDS 3311922 3312323 . - 0 ID=cds-WJH07742.1;Parent=gene-PUW31_16155;Dbxref=NCBI_GP:WJH07742.1;Name=WJH07742.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=PUW31_16155;product=30S ribosome-binding factor RbfA;protein_id=WJH07742.1;transl_table=11 CP118128.1 Genbank gene 3312544 3315222 . - . ID=gene-PUW31_16160;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=PUW31_16160 CP118128.1 Protein Homology CDS 3312544 3315222 . - 0 ID=cds-WJH07743.1;Parent=gene-PUW31_16160;Dbxref=NCBI_GP:WJH07743.1;Name=WJH07743.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462199.1;locus_tag=PUW31_16160;product=translation initiation factor IF-2;protein_id=WJH07743.1;transl_table=11 CP118128.1 Genbank pseudogene 3315247 3316748 . - . ID=gene-PUW31_16165;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=pseudogene;locus_tag=PUW31_16165;pseudo=true CP118128.1 Protein Homology CDS 3315247 3316748 . - 0 ID=cds-PUW31_16165;Parent=gene-PUW31_16165;Note=frameshifted;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=PUW31_16165;product=transcription termination factor NusA;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3316776 3317228 . - . ID=gene-PUW31_16170;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=PUW31_16170 CP118128.1 Protein Homology CDS 3316776 3317228 . - 0 ID=cds-WJH07744.1;Parent=gene-PUW31_16170;Dbxref=NCBI_GP:WJH07744.1;Name=WJH07744.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=PUW31_16170;product=ribosome maturation factor RimP;protein_id=WJH07744.1;transl_table=11 CP118128.1 Genbank gene 3317436 3317512 . - . ID=gene-PUW31_16175;Name=PUW31_16175;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_16175 CP118128.1 tRNAscan-SE tRNA 3317436 3317512 . - . ID=rna-PUW31_16175;Parent=gene-PUW31_16175;anticodon=(pos:complement(3317476..3317478));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_16175;product=tRNA-Met CP118128.1 tRNAscan-SE exon 3317436 3317512 . - . ID=exon-PUW31_16175-1;Parent=rna-PUW31_16175;anticodon=(pos:complement(3317476..3317478));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_16175;product=tRNA-Met CP118128.1 Genbank gene 3317856 3319199 . + . ID=gene-PUW31_16180;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=PUW31_16180 CP118128.1 Protein Homology CDS 3317856 3319199 . + 0 ID=cds-WJH07745.1;Parent=gene-PUW31_16180;Dbxref=NCBI_GP:WJH07745.1;Name=WJH07745.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=PUW31_16180;product=argininosuccinate synthase;protein_id=WJH07745.1;transl_table=11 CP118128.1 Genbank gene 3319357 3319809 . + . ID=gene-PUW31_16185;Name=PUW31_16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16185 CP118128.1 GeneMarkS-2+ CDS 3319357 3319809 . + 0 ID=cds-WJH07746.1;Parent=gene-PUW31_16185;Dbxref=NCBI_GP:WJH07746.1;Name=WJH07746.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_16185;product=hypothetical protein;protein_id=WJH07746.1;transl_table=11 CP118128.1 Genbank gene 3319766 3320317 . + . ID=gene-PUW31_16190;Name=PUW31_16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16190 CP118128.1 GeneMarkS-2+ CDS 3319766 3320317 . + 0 ID=cds-WJH07747.1;Parent=gene-PUW31_16190;Dbxref=NCBI_GP:WJH07747.1;Name=WJH07747.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_16190;product=hypothetical protein;protein_id=WJH07747.1;transl_table=11 CP118128.1 Genbank gene 3320402 3320488 . - . ID=gene-PUW31_16195;Name=PUW31_16195;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_16195 CP118128.1 tRNAscan-SE tRNA 3320402 3320488 . - . ID=rna-PUW31_16195;Parent=gene-PUW31_16195;anticodon=(pos:complement(3320452..3320454));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_16195;product=tRNA-Leu CP118128.1 tRNAscan-SE exon 3320402 3320488 . - . ID=exon-PUW31_16195-1;Parent=rna-PUW31_16195;anticodon=(pos:complement(3320452..3320454));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_16195;product=tRNA-Leu CP118128.1 Genbank gene 3320502 3320834 . - . ID=gene-PUW31_16200;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=PUW31_16200 CP118128.1 Protein Homology CDS 3320502 3320834 . - 0 ID=cds-WJH07748.1;Parent=gene-PUW31_16200;Dbxref=NCBI_GP:WJH07748.1;Name=WJH07748.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secG;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462204.1;locus_tag=PUW31_16200;product=preprotein translocase subunit SecG;protein_id=WJH07748.1;transl_table=11 CP118128.1 Genbank pseudogene 3321057 3322393 . - . ID=gene-PUW31_16205;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=pseudogene;locus_tag=PUW31_16205;pseudo=true CP118128.1 Protein Homology CDS 3321057 3322393 . - 0 ID=cds-PUW31_16205;Parent=gene-PUW31_16205;Note=frameshifted;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular transferase activity%2C phosphotransferases|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462205.1;locus_tag=PUW31_16205;product=phosphoglucosamine mutase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3322386 3323234 . - . ID=gene-PUW31_16210;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=PUW31_16210 CP118128.1 Protein Homology CDS 3322386 3323234 . - 0 ID=cds-WJH07749.1;Parent=gene-PUW31_16210;Dbxref=NCBI_GP:WJH07749.1;Name=WJH07749.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462206.1;locus_tag=PUW31_16210;product=dihydropteroate synthase;protein_id=WJH07749.1;transl_table=11 CP118128.1 Genbank gene 3323339 3325273 . - . ID=gene-PUW31_16215;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=PUW31_16215 CP118128.1 Protein Homology CDS 3323339 3325273 . - 0 ID=cds-WJH07750.1;Parent=gene-PUW31_16215;Dbxref=NCBI_GP:WJH07750.1;Name=WJH07750.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=PUW31_16215;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WJH07750.1;transl_table=11 CP118128.1 Genbank gene 3325377 3326003 . - . ID=gene-PUW31_16220;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=PUW31_16220 CP118128.1 Protein Homology CDS 3325377 3326003 . - 0 ID=cds-WJH07751.1;Parent=gene-PUW31_16220;Dbxref=NCBI_GP:WJH07751.1;Name=WJH07751.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462208.1;locus_tag=PUW31_16220;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WJH07751.1;transl_table=11 CP118128.1 Genbank gene 3326130 3326423 . + . ID=gene-PUW31_16225;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=PUW31_16225 CP118128.1 Protein Homology CDS 3326130 3326423 . + 0 ID=cds-WJH10765.1;Parent=gene-PUW31_16225;Dbxref=NCBI_GP:WJH10765.1;Name=WJH10765.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=PUW31_16225;product=ribosome assembly RNA-binding protein YhbY;protein_id=WJH10765.1;transl_table=11 CP118128.1 Genbank gene 3326579 3327055 . - . ID=gene-PUW31_16230;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=PUW31_16230 CP118128.1 Protein Homology CDS 3326579 3327055 . - 0 ID=cds-WJH07752.1;Parent=gene-PUW31_16230;Dbxref=NCBI_GP:WJH07752.1;Name=WJH07752.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=PUW31_16230;product=transcription elongation factor GreA;protein_id=WJH07752.1;transl_table=11 CP118128.1 Genbank gene 3327303 3328736 . + . ID=gene-PUW31_16235;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=PUW31_16235 CP118128.1 Protein Homology CDS 3327303 3328736 . + 0 ID=cds-WJH07753.1;Parent=gene-PUW31_16235;Dbxref=NCBI_GP:WJH07753.1;Name=WJH07753.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462211.1;locus_tag=PUW31_16235;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WJH07753.1;transl_table=11 CP118128.1 Genbank gene 3328867 3330039 . - . ID=gene-PUW31_16240;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=PUW31_16240 CP118128.1 Protein Homology CDS 3328867 3330039 . - 0 ID=cds-WJH07754.1;Parent=gene-PUW31_16240;Dbxref=NCBI_GP:WJH07754.1;Name=WJH07754.1;Ontology_term=GO:0042254,GO:0005525;gbkey=CDS;gene=cgtA;go_function=GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462212.1;locus_tag=PUW31_16240;product=Obg family GTPase CgtA;protein_id=WJH07754.1;transl_table=11 CP118128.1 Genbank gene 3330055 3331020 . - . ID=gene-PUW31_16245;Name=PUW31_16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16245 CP118128.1 Protein Homology CDS 3330055 3331020 . - 0 ID=cds-WJH07755.1;Parent=gene-PUW31_16245;Dbxref=NCBI_GP:WJH07755.1;Name=WJH07755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=PUW31_16245;product=DMT family transporter;protein_id=WJH07755.1;transl_table=11 CP118128.1 Genbank gene 3331150 3331407 . - . ID=gene-PUW31_16250;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=PUW31_16250 CP118128.1 Protein Homology CDS 3331150 3331407 . - 0 ID=cds-WJH07756.1;Parent=gene-PUW31_16250;Dbxref=NCBI_GP:WJH07756.1;Name=WJH07756.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=PUW31_16250;product=50S ribosomal protein L27;protein_id=WJH07756.1;transl_table=11 CP118128.1 Genbank gene 3331427 3331738 . - . ID=gene-PUW31_16255;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=PUW31_16255 CP118128.1 Protein Homology CDS 3331427 3331738 . - 0 ID=cds-WJH07757.1;Parent=gene-PUW31_16255;Dbxref=NCBI_GP:WJH07757.1;Name=WJH07757.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=PUW31_16255;product=50S ribosomal protein L21;protein_id=WJH07757.1;transl_table=11 CP118128.1 Genbank gene 3331996 3332967 . + . ID=gene-PUW31_16260;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=PUW31_16260 CP118128.1 Protein Homology CDS 3331996 3332967 . + 0 ID=cds-WJH07758.1;Parent=gene-PUW31_16260;Dbxref=NCBI_GP:WJH07758.1;Name=WJH07758.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462215.1;locus_tag=PUW31_16260;product=octaprenyl diphosphate synthase;protein_id=WJH07758.1;transl_table=11 CP118128.1 Genbank gene 3333199 3333486 . + . ID=gene-PUW31_16265;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=PUW31_16265 CP118128.1 Protein Homology CDS 3333199 3333486 . + 0 ID=cds-WJH07759.1;Parent=gene-PUW31_16265;Dbxref=NCBI_GP:WJH07759.1;Name=WJH07759.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462216.1;locus_tag=PUW31_16265;product=DNA-binding transcriptional regulator SfsB;protein_id=WJH07759.1;transl_table=11 CP118128.1 Genbank pseudogene 3333545 3334803 . - . ID=gene-PUW31_16270;Name=murA;gbkey=Gene;gene=murA;gene_biotype=pseudogene;locus_tag=PUW31_16270;pseudo=true CP118128.1 Protein Homology CDS 3333545 3334803 . - 0 ID=cds-PUW31_16270;Parent=gene-PUW31_16270;Note=frameshifted;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462217.1;locus_tag=PUW31_16270;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3334857 3335111 . - . ID=gene-PUW31_16275;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=PUW31_16275 CP118128.1 Protein Homology CDS 3334857 3335111 . - 0 ID=cds-WJH07760.1;Parent=gene-PUW31_16275;Dbxref=NCBI_GP:WJH07760.1;Name=WJH07760.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=PUW31_16275;product=BolA family iron metabolism protein IbaG;protein_id=WJH07760.1;transl_table=11 CP118128.1 Genbank gene 3335299 3335595 . - . ID=gene-PUW31_16280;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=PUW31_16280 CP118128.1 Protein Homology CDS 3335299 3335595 . - 0 ID=cds-WJH07761.1;Parent=gene-PUW31_16280;Dbxref=NCBI_GP:WJH07761.1;Name=WJH07761.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462219.1;locus_tag=PUW31_16280;product=lipid asymmetry maintenance protein MlaB;protein_id=WJH07761.1;transl_table=11 CP118128.1 Genbank gene 3335595 3336230 . - . ID=gene-PUW31_16285;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=PUW31_16285 CP118128.1 Protein Homology CDS 3335595 3336230 . - 0 ID=cds-WJH07762.1;Parent=gene-PUW31_16285;Dbxref=NCBI_GP:WJH07762.1;Name=WJH07762.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462220.1;locus_tag=PUW31_16285;product=phospholipid-binding protein MlaC;protein_id=WJH07762.1;transl_table=11 CP118128.1 Genbank gene 3336223 3336798 . - . ID=gene-PUW31_16290;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=PUW31_16290 CP118128.1 Protein Homology CDS 3336223 3336798 . - 0 ID=cds-WJH07763.1;Parent=gene-PUW31_16290;Dbxref=NCBI_GP:WJH07763.1;Name=WJH07763.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462221.1;locus_tag=PUW31_16290;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WJH07763.1;transl_table=11 CP118128.1 Genbank gene 3336803 3337585 . - . ID=gene-PUW31_16295;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=PUW31_16295 CP118128.1 Protein Homology CDS 3336803 3337585 . - 0 ID=cds-WJH07764.1;Parent=gene-PUW31_16295;Dbxref=NCBI_GP:WJH07764.1;Name=WJH07764.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=PUW31_16295;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WJH07764.1;transl_table=11 CP118128.1 Genbank gene 3337593 3338405 . - . ID=gene-PUW31_16300;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=PUW31_16300 CP118128.1 Protein Homology CDS 3337593 3338405 . - 0 ID=cds-WJH07765.1;Parent=gene-PUW31_16300;Dbxref=NCBI_GP:WJH07765.1;Name=WJH07765.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462223.1;locus_tag=PUW31_16300;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WJH07765.1;transl_table=11 CP118128.1 Genbank gene 3338618 3339595 . + . ID=gene-PUW31_16305;Name=PUW31_16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16305 CP118128.1 Protein Homology CDS 3338618 3339595 . + 0 ID=cds-WJH07766.1;Parent=gene-PUW31_16305;Dbxref=NCBI_GP:WJH07766.1;Name=WJH07766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462224.1;locus_tag=PUW31_16305;product=calcium/sodium antiporter;protein_id=WJH07766.1;transl_table=11 CP118128.1 Genbank gene 3339609 3340595 . + . ID=gene-PUW31_16310;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=PUW31_16310 CP118128.1 Protein Homology CDS 3339609 3340595 . + 0 ID=cds-WJH07767.1;Parent=gene-PUW31_16310;Dbxref=NCBI_GP:WJH07767.1;Name=WJH07767.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462225.1;locus_tag=PUW31_16310;product=arabinose-5-phosphate isomerase KdsD;protein_id=WJH07767.1;transl_table=11 CP118128.1 Genbank gene 3340616 3341182 . + . ID=gene-PUW31_16315;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=PUW31_16315 CP118128.1 Protein Homology CDS 3340616 3341182 . + 0 ID=cds-WJH07768.1;Parent=gene-PUW31_16315;Dbxref=NCBI_GP:WJH07768.1;Name=WJH07768.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462226.1;locus_tag=PUW31_16315;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WJH07768.1;transl_table=11 CP118128.1 Genbank gene 3341179 3341754 . + . ID=gene-PUW31_16320;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=PUW31_16320 CP118128.1 Protein Homology CDS 3341179 3341754 . + 0 ID=cds-WJH07769.1;Parent=gene-PUW31_16320;Dbxref=NCBI_GP:WJH07769.1;Name=WJH07769.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462227.1;locus_tag=PUW31_16320;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WJH07769.1;transl_table=11 CP118128.1 Genbank gene 3341723 3342277 . + . ID=gene-PUW31_16325;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=PUW31_16325 CP118128.1 Protein Homology CDS 3341723 3342277 . + 0 ID=cds-WJH07770.1;Parent=gene-PUW31_16325;Dbxref=NCBI_GP:WJH07770.1;Name=WJH07770.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462228.1;locus_tag=PUW31_16325;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WJH07770.1;transl_table=11 CP118128.1 Genbank gene 3342284 3343009 . + . ID=gene-PUW31_16330;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=PUW31_16330 CP118128.1 Protein Homology CDS 3342284 3343009 . + 0 ID=cds-WJH07771.1;Parent=gene-PUW31_16330;Dbxref=NCBI_GP:WJH07771.1;Name=WJH07771.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=PUW31_16330;product=LPS export ABC transporter ATP-binding protein;protein_id=WJH07771.1;transl_table=11 CP118128.1 Genbank gene 3343057 3344490 . + . ID=gene-PUW31_16335;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=PUW31_16335 CP118128.1 Protein Homology CDS 3343057 3344490 . + 0 ID=cds-WJH07772.1;Parent=gene-PUW31_16335;Dbxref=NCBI_GP:WJH07772.1;Name=WJH07772.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462230.1;locus_tag=PUW31_16335;product=RNA polymerase factor sigma-54;protein_id=WJH07772.1;transl_table=11 CP118128.1 Genbank gene 3344513 3344800 . + . ID=gene-PUW31_16340;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=PUW31_16340 CP118128.1 Protein Homology CDS 3344513 3344800 . + 0 ID=cds-WJH07773.1;Parent=gene-PUW31_16340;Dbxref=NCBI_GP:WJH07773.1;Name=WJH07773.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462231.1;locus_tag=PUW31_16340;product=ribosome hibernation promoting factor;protein_id=WJH07773.1;transl_table=11 CP118128.1 Genbank gene 3344918 3345409 . + . ID=gene-PUW31_16345;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=PUW31_16345 CP118128.1 Protein Homology CDS 3344918 3345409 . + 0 ID=cds-WJH07774.1;Parent=gene-PUW31_16345;Dbxref=NCBI_GP:WJH07774.1;Name=WJH07774.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462232.1;locus_tag=PUW31_16345;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WJH07774.1;transl_table=11 CP118128.1 Genbank gene 3345455 3346309 . + . ID=gene-PUW31_16350;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=PUW31_16350 CP118128.1 Protein Homology CDS 3345455 3346309 . + 0 ID=cds-WJH07775.1;Parent=gene-PUW31_16350;Dbxref=NCBI_GP:WJH07775.1;Name=WJH07775.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462233.1;locus_tag=PUW31_16350;product=RNase adapter RapZ;protein_id=WJH07775.1;transl_table=11 CP118128.1 Genbank gene 3346306 3346578 . + . ID=gene-PUW31_16355;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=PUW31_16355 CP118128.1 Protein Homology CDS 3346306 3346578 . + 0 ID=cds-WJH07776.1;Parent=gene-PUW31_16355;Dbxref=NCBI_GP:WJH07776.1;Name=WJH07776.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=PUW31_16355;product=PTS phosphocarrier protein NPr;protein_id=WJH07776.1;transl_table=11 CP118128.1 Genbank gene 3346828 3347460 . + . ID=gene-PUW31_16360;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=PUW31_16360 CP118128.1 Protein Homology CDS 3346828 3347460 . + 0 ID=cds-WJH07777.1;Parent=gene-PUW31_16360;Dbxref=NCBI_GP:WJH07777.1;Name=WJH07777.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462235.1;locus_tag=PUW31_16360;product=PhoP regulatory network protein YrbL;protein_id=WJH07777.1;transl_table=11 CP118128.1 Genbank gene 3347535 3348263 . - . ID=gene-PUW31_16365;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=PUW31_16365 CP118128.1 Protein Homology CDS 3347535 3348263 . - 0 ID=cds-WJH07778.1;Parent=gene-PUW31_16365;Dbxref=NCBI_GP:WJH07778.1;Name=WJH07778.1;Ontology_term=GO:0009252,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462236.1;locus_tag=PUW31_16365;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WJH07778.1;transl_table=11 CP118128.1 Genbank gene 3348260 3348913 . - . ID=gene-PUW31_16370;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=PUW31_16370 CP118128.1 Protein Homology CDS 3348260 3348913 . - 0 ID=cds-WJH07779.1;Parent=gene-PUW31_16370;Dbxref=NCBI_GP:WJH07779.1;Name=WJH07779.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462237.1;locus_tag=PUW31_16370;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WJH07779.1;transl_table=11 CP118128.1 Genbank pseudogene 3349140 3351475 . - . ID=gene-PUW31_16375;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=pseudogene;locus_tag=PUW31_16375;pseudo=true CP118128.1 Protein Homology CDS 3349140 3351475 . - 0 ID=cds-PUW31_16375;Parent=gene-PUW31_16375;Note=frameshifted;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462238.1;locus_tag=PUW31_16375;product=aerobic respiration two-component sensor histidine kinase ArcB;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3351569 3352498 . - . ID=gene-PUW31_16380;Name=PUW31_16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16380 CP118128.1 Protein Homology CDS 3351569 3352498 . - 0 ID=cds-WJH07780.1;Parent=gene-PUW31_16380;Dbxref=NCBI_GP:WJH07780.1;Name=WJH07780.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462239.1;locus_tag=PUW31_16380;product=TIGR01212 family radical SAM protein;protein_id=WJH07780.1;transl_table=11 CP118128.1 Genbank gene 3353170 3357630 . + . ID=gene-PUW31_16385;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=PUW31_16385 CP118128.1 Protein Homology CDS 3353170 3357630 . + 0 ID=cds-WJH07781.1;Parent=gene-PUW31_16385;Dbxref=NCBI_GP:WJH07781.1;Name=WJH07781.1;Ontology_term=GO:0006537,GO:0006807,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=PUW31_16385;product=glutamate synthase large subunit;protein_id=WJH07781.1;transl_table=11 CP118128.1 Genbank gene 3357640 3359058 . + . ID=gene-PUW31_16390;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=PUW31_16390 CP118128.1 Protein Homology CDS 3357640 3359058 . + 0 ID=cds-WJH07782.1;Parent=gene-PUW31_16390;Dbxref=NCBI_GP:WJH07782.1;Name=WJH07782.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=PUW31_16390;product=glutamate synthase subunit GltD;protein_id=WJH07782.1;transl_table=11 CP118128.1 Genbank gene 3359265 3360368 . + . ID=gene-PUW31_16395;Name=PUW31_16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16395 CP118128.1 Protein Homology CDS 3359265 3360368 . + 0 ID=cds-WJH07783.1;Parent=gene-PUW31_16395;Dbxref=NCBI_GP:WJH07783.1;Name=WJH07783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462242.1;locus_tag=PUW31_16395;product=PDDEXK nuclease domain-containing protein;protein_id=WJH07783.1;transl_table=11 CP118128.1 Genbank gene 3360484 3361737 . + . ID=gene-PUW31_16400;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=PUW31_16400 CP118128.1 Protein Homology CDS 3360484 3361737 . + 0 ID=cds-WJH07784.1;Parent=gene-PUW31_16400;Dbxref=NCBI_GP:WJH07784.1;Name=WJH07784.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462243.1;locus_tag=PUW31_16400;product=cytosine permease;protein_id=WJH07784.1;transl_table=11 CP118128.1 Genbank gene 3361724 3363004 . + . ID=gene-PUW31_16405;Name=PUW31_16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16405 CP118128.1 Protein Homology CDS 3361724 3363004 . + 0 ID=cds-WJH07785.1;Parent=gene-PUW31_16405;Dbxref=NCBI_GP:WJH07785.1;Name=WJH07785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462244.1;locus_tag=PUW31_16405;product=cytosine deaminase;protein_id=WJH07785.1;transl_table=11 CP118128.1 Genbank gene 3363086 3363553 . - . ID=gene-PUW31_16410;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=PUW31_16410 CP118128.1 Protein Homology CDS 3363086 3363553 . - 0 ID=cds-WJH07786.1;Parent=gene-PUW31_16410;Dbxref=NCBI_GP:WJH07786.1;Name=WJH07786.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=cellular response to DNA damage stimulus|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462245.1;locus_tag=PUW31_16410;product=N-acetylneuraminate anomerase;protein_id=WJH07786.1;transl_table=11 CP118128.1 Genbank gene 3363550 3364425 . - . ID=gene-PUW31_16415;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=PUW31_16415 CP118128.1 Protein Homology CDS 3363550 3364425 . - 0 ID=cds-WJH07787.1;Parent=gene-PUW31_16415;Dbxref=NCBI_GP:WJH07787.1;Name=WJH07787.1;gbkey=CDS;gene=nanK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462246.1;locus_tag=PUW31_16415;product=N-acetylmannosamine kinase;protein_id=WJH07787.1;transl_table=11 CP118128.1 Genbank gene 3364422 3365111 . - . ID=gene-PUW31_16420;Name=PUW31_16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16420 CP118128.1 Protein Homology CDS 3364422 3365111 . - 0 ID=cds-WJH07788.1;Parent=gene-PUW31_16420;Dbxref=NCBI_GP:WJH07788.1;Name=WJH07788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462247.1;locus_tag=PUW31_16420;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WJH07788.1;transl_table=11 CP118128.1 Genbank gene 3365158 3366648 . - . ID=gene-PUW31_16425;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=PUW31_16425 CP118128.1 Protein Homology CDS 3365158 3366648 . - 0 ID=cds-WJH07789.1;Parent=gene-PUW31_16425;Dbxref=NCBI_GP:WJH07789.1;Name=WJH07789.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462248.1;locus_tag=PUW31_16425;product=sialic acid transporter NanT;protein_id=WJH07789.1;transl_table=11 CP118128.1 Genbank gene 3366764 3367657 . - . ID=gene-PUW31_16430;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=PUW31_16430 CP118128.1 Protein Homology CDS 3366764 3367657 . - 0 ID=cds-WJH07790.1;Parent=gene-PUW31_16430;Dbxref=NCBI_GP:WJH07790.1;Name=WJH07790.1;Ontology_term=GO:0006040,GO:0009273,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462249.1;locus_tag=PUW31_16430;product=N-acetylneuraminate lyase;protein_id=WJH07790.1;transl_table=11 CP118128.1 Genbank gene 3367792 3368583 . - . ID=gene-PUW31_16435;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=PUW31_16435 CP118128.1 Protein Homology CDS 3367792 3368583 . - 0 ID=cds-WJH07791.1;Parent=gene-PUW31_16435;Dbxref=NCBI_GP:WJH07791.1;Name=WJH07791.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462250.1;locus_tag=PUW31_16435;product=transcriptional regulator NanR;protein_id=WJH07791.1;transl_table=11 CP118128.1 Genbank gene 3368692 3369192 . - . ID=gene-PUW31_16440;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=PUW31_16440 CP118128.1 Protein Homology CDS 3368692 3369192 . - 0 ID=cds-WJH07792.1;Parent=gene-PUW31_16440;Dbxref=NCBI_GP:WJH07792.1;Name=WJH07792.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462251.1;locus_tag=PUW31_16440;product=ClpXP protease specificity-enhancing factor;protein_id=WJH07792.1;transl_table=11 CP118128.1 Genbank gene 3369198 3369836 . - . ID=gene-PUW31_16445;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=PUW31_16445 CP118128.1 Protein Homology CDS 3369198 3369836 . - 0 ID=cds-WJH07793.1;Parent=gene-PUW31_16445;Dbxref=NCBI_GP:WJH07793.1;Name=WJH07793.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=PUW31_16445;product=stringent starvation protein SspA;protein_id=WJH07793.1;transl_table=11 CP118128.1 Genbank gene 3370098 3370850 . - . ID=gene-PUW31_16450;Name=PUW31_16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16450 CP118128.1 Protein Homology CDS 3370098 3370850 . - 0 ID=cds-WJH10766.1;Parent=gene-PUW31_16450;Dbxref=NCBI_GP:WJH10766.1;Name=WJH10766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462253.1;locus_tag=PUW31_16450;product=DUF695 domain-containing protein;protein_id=WJH10766.1;transl_table=11 CP118128.1 Genbank gene 3371050 3371442 . - . ID=gene-PUW31_16455;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=PUW31_16455 CP118128.1 Protein Homology CDS 3371050 3371442 . - 0 ID=cds-WJH07794.1;Parent=gene-PUW31_16455;Dbxref=NCBI_GP:WJH07794.1;Name=WJH07794.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=PUW31_16455;product=30S ribosomal protein S9;protein_id=WJH07794.1;transl_table=11 CP118128.1 Genbank gene 3371458 3371886 . - . ID=gene-PUW31_16460;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=PUW31_16460 CP118128.1 Protein Homology CDS 3371458 3371886 . - 0 ID=cds-WJH07795.1;Parent=gene-PUW31_16460;Dbxref=NCBI_GP:WJH07795.1;Name=WJH07795.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=PUW31_16460;product=50S ribosomal protein L13;protein_id=WJH07795.1;transl_table=11 CP118128.1 Genbank gene 3372188 3373312 . - . ID=gene-PUW31_16465;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=PUW31_16465 CP118128.1 Protein Homology CDS 3372188 3373312 . - 0 ID=cds-WJH07796.1;Parent=gene-PUW31_16465;Dbxref=NCBI_GP:WJH07796.1;Name=WJH07796.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462256.1;locus_tag=PUW31_16465;product=cell division protein ZapE;protein_id=WJH07796.1;transl_table=11 CP118128.1 Genbank gene 3373505 3373903 . + . ID=gene-PUW31_16470;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=PUW31_16470 CP118128.1 Protein Homology CDS 3373505 3373903 . + 0 ID=cds-WJH07797.1;Parent=gene-PUW31_16470;Dbxref=NCBI_GP:WJH07797.1;Name=WJH07797.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=PUW31_16470;product=Z-ring associated protein ZapG;protein_id=WJH07797.1;transl_table=11 CP118128.1 Genbank gene 3374060 3375427 . + . ID=gene-PUW31_16475;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=PUW31_16475 CP118128.1 Protein Homology CDS 3374060 3375427 . + 0 ID=cds-WJH07798.1;Parent=gene-PUW31_16475;Dbxref=NCBI_GP:WJH07798.1;Name=WJH07798.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462258.1;locus_tag=PUW31_16475;product=serine endoprotease DegQ;protein_id=WJH07798.1;transl_table=11 CP118128.1 Genbank gene 3375520 3376590 . + . ID=gene-PUW31_16480;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=PUW31_16480 CP118128.1 Protein Homology CDS 3375520 3376590 . + 0 ID=cds-WJH07799.1;Parent=gene-PUW31_16480;Dbxref=NCBI_GP:WJH07799.1;Name=WJH07799.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462259.1;locus_tag=PUW31_16480;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WJH07799.1;transl_table=11 CP118128.1 Genbank gene 3376624 3377355 . - . ID=gene-PUW31_16485;Name=PUW31_16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16485 CP118128.1 Protein Homology CDS 3376624 3377355 . - 0 ID=cds-WJH07800.1;Parent=gene-PUW31_16485;Dbxref=NCBI_GP:WJH07800.1;Name=WJH07800.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462260.1;locus_tag=PUW31_16485;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WJH07800.1;transl_table=11 CP118128.1 Genbank gene 3377375 3378676 . - . ID=gene-PUW31_16490;Name=PUW31_16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16490 CP118128.1 Protein Homology CDS 3377375 3378676 . - 0 ID=cds-WJH07801.1;Parent=gene-PUW31_16490;Dbxref=NCBI_GP:WJH07801.1;Name=WJH07801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=PUW31_16490;product=oxalacetate decarboxylase subunit beta;protein_id=WJH07801.1;transl_table=11 CP118128.1 Genbank gene 3378689 3380461 . - . ID=gene-PUW31_16495;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=PUW31_16495 CP118128.1 Protein Homology CDS 3378689 3380461 . - 0 ID=cds-WJH07802.1;Parent=gene-PUW31_16495;Dbxref=NCBI_GP:WJH07802.1;Name=WJH07802.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=PUW31_16495;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WJH07802.1;transl_table=11 CP118128.1 Genbank gene 3380477 3380719 . - . ID=gene-PUW31_16500;Name=PUW31_16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16500 CP118128.1 Protein Homology CDS 3380477 3380719 . - 0 ID=cds-WJH07803.1;Parent=gene-PUW31_16500;Dbxref=NCBI_GP:WJH07803.1;Name=WJH07803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462263.1;locus_tag=PUW31_16500;product=oxaloacetate decarboxylase subunit gamma;protein_id=WJH07803.1;transl_table=11 CP118128.1 Genbank gene 3380876 3381493 . - . ID=gene-PUW31_16505;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=PUW31_16505 CP118128.1 Protein Homology CDS 3380876 3381493 . - 0 ID=cds-WJH07804.1;Parent=gene-PUW31_16505;Dbxref=NCBI_GP:WJH07804.1;Name=WJH07804.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462264.1;locus_tag=PUW31_16505;product=L(+)-tartrate dehydratase subunit beta;protein_id=WJH07804.1;transl_table=11 CP118128.1 Genbank gene 3381493 3382392 . - . ID=gene-PUW31_16510;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=PUW31_16510 CP118128.1 Protein Homology CDS 3381493 3382392 . - 0 ID=cds-WJH07805.1;Parent=gene-PUW31_16510;Dbxref=NCBI_GP:WJH07805.1;Name=WJH07805.1;gbkey=CDS;gene=ttdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462265.1;locus_tag=PUW31_16510;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WJH07805.1;transl_table=11 CP118128.1 Genbank gene 3382425 3383693 . - . ID=gene-PUW31_16515;Name=PUW31_16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16515 CP118128.1 Protein Homology CDS 3382425 3383693 . - 0 ID=cds-WJH07806.1;Parent=gene-PUW31_16515;Dbxref=NCBI_GP:WJH07806.1;Name=WJH07806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462266.1;locus_tag=PUW31_16515;product=SLC13 family permease;protein_id=WJH07806.1;transl_table=11 CP118128.1 Genbank gene 3383904 3384569 . - . ID=gene-PUW31_16520;Name=PUW31_16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16520 CP118128.1 Protein Homology CDS 3383904 3384569 . - 0 ID=cds-WJH07807.1;Parent=gene-PUW31_16520;Dbxref=NCBI_GP:WJH07807.1;Name=WJH07807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462267.1;locus_tag=PUW31_16520;product=GntR family transcriptional regulator;protein_id=WJH07807.1;transl_table=11 CP118128.1 Genbank gene 3384556 3385185 . - . ID=gene-PUW31_16525;Name=PUW31_16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16525 CP118128.1 Protein Homology CDS 3384556 3385185 . - 0 ID=cds-WJH07808.1;Parent=gene-PUW31_16525;Dbxref=NCBI_GP:WJH07808.1;Name=WJH07808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462268.1;locus_tag=PUW31_16525;product=GntR family transcriptional regulator;protein_id=WJH07808.1;transl_table=11 CP118128.1 Genbank gene 3385305 3386243 . - . ID=gene-PUW31_16530;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=PUW31_16530 CP118128.1 Protein Homology CDS 3385305 3386243 . - 0 ID=cds-WJH07809.1;Parent=gene-PUW31_16530;Dbxref=NCBI_GP:WJH07809.1;Name=WJH07809.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=PUW31_16530;product=malate dehydrogenase;protein_id=WJH07809.1;transl_table=11 CP118128.1 Genbank gene 3386658 3387128 . + . ID=gene-PUW31_16535;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=PUW31_16535 CP118128.1 Protein Homology CDS 3386658 3387128 . + 0 ID=cds-WJH07810.1;Parent=gene-PUW31_16535;Dbxref=NCBI_GP:WJH07810.1;Name=WJH07810.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=PUW31_16535;product=transcriptional regulator ArgR;protein_id=WJH07810.1;transl_table=11 CP118128.1 Genbank gene 3387493 3387756 . + . ID=gene-PUW31_16540;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=PUW31_16540 CP118128.1 Protein Homology CDS 3387493 3387756 . + 0 ID=cds-WJH07811.1;Parent=gene-PUW31_16540;Dbxref=NCBI_GP:WJH07811.1;Name=WJH07811.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462271.1;locus_tag=PUW31_16540;product=peroxide/acid stress response protein YhcN;protein_id=WJH07811.1;transl_table=11 CP118128.1 Genbank gene 3387860 3388126 . + . ID=gene-PUW31_16545;Name=yhcN-B;gbkey=Gene;gene=yhcN-B;gene_biotype=protein_coding;locus_tag=PUW31_16545 CP118128.1 Protein Homology CDS 3387860 3388126 . + 0 ID=cds-WJH07812.1;Parent=gene-PUW31_16545;Dbxref=NCBI_GP:WJH07812.1;Name=WJH07812.1;gbkey=CDS;gene=yhcN-B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462272.1;locus_tag=PUW31_16545;product=DUF1471 family stress response protein YhcN-B;protein_id=WJH07812.1;transl_table=11 CP118128.1 Genbank gene 3388186 3388458 . - . ID=gene-PUW31_16550;Name=PUW31_16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16550 CP118128.1 Protein Homology CDS 3388186 3388458 . - 0 ID=cds-WJH07813.1;Parent=gene-PUW31_16550;Dbxref=NCBI_GP:WJH07813.1;Name=WJH07813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462273.1;locus_tag=PUW31_16550;product=hypothetical protein;protein_id=WJH07813.1;transl_table=11 CP118128.1 Genbank gene 3388630 3390597 . - . ID=gene-PUW31_16555;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=PUW31_16555 CP118128.1 Protein Homology CDS 3388630 3390597 . - 0 ID=cds-WJH07814.1;Parent=gene-PUW31_16555;Dbxref=NCBI_GP:WJH07814.1;Name=WJH07814.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462274.1;locus_tag=PUW31_16555;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WJH07814.1;transl_table=11 CP118128.1 Genbank gene 3390603 3391535 . - . ID=gene-PUW31_16560;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=PUW31_16560 CP118128.1 Protein Homology CDS 3390603 3391535 . - 0 ID=cds-WJH07815.1;Parent=gene-PUW31_16560;Dbxref=NCBI_GP:WJH07815.1;Name=WJH07815.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462275.1;locus_tag=PUW31_16560;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WJH07815.1;transl_table=11 CP118128.1 Genbank gene 3391543 3391746 . - . ID=gene-PUW31_16565;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=PUW31_16565 CP118128.1 Protein Homology CDS 3391543 3391746 . - 0 ID=cds-WJH07816.1;Parent=gene-PUW31_16565;Dbxref=NCBI_GP:WJH07816.1;Name=WJH07816.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=PUW31_16565;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WJH07816.1;transl_table=11 CP118128.1 Genbank gene 3391928 3392857 . + . ID=gene-PUW31_16570;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=PUW31_16570 CP118128.1 Protein Homology CDS 3391928 3392857 . + 0 ID=cds-WJH07817.1;Parent=gene-PUW31_16570;Dbxref=NCBI_GP:WJH07817.1;Name=WJH07817.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462277.1;locus_tag=PUW31_16570;product=HTH-type transcriptional activator AaeR;protein_id=WJH07817.1;transl_table=11 CP118128.1 Genbank pseudogene 3392980 3394424 . - . ID=gene-PUW31_16575;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=pseudogene;locus_tag=PUW31_16575;pseudo=true CP118128.1 Protein Homology CDS 3392980 3394424 . - 0 ID=cds-PUW31_16575;Parent=gene-PUW31_16575;Note=frameshifted;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=PUW31_16575;product=metalloprotease TldD;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 3394569 3398366 . - . ID=gene-PUW31_16580;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=pseudogene;locus_tag=PUW31_16580;pseudo=true CP118128.1 Protein Homology CDS 3394569 3398366 . - 0 ID=cds-PUW31_16580;Parent=gene-PUW31_16580;Note=frameshifted;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462279.1;locus_tag=PUW31_16580;product=AsmA2 domain-containing protein YhdP;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3398477 3399946 . - . ID=gene-PUW31_16585;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=PUW31_16585 CP118128.1 Protein Homology CDS 3398477 3399946 . - 0 ID=cds-WJH07818.1;Parent=gene-PUW31_16585;Dbxref=NCBI_GP:WJH07818.1;Name=WJH07818.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,ribonuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=PUW31_16585;product=ribonuclease G;protein_id=WJH07818.1;transl_table=11 CP118128.1 Genbank gene 3399936 3400529 . - . ID=gene-PUW31_16590;Name=PUW31_16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16590 CP118128.1 Protein Homology CDS 3399936 3400529 . - 0 ID=cds-WJH07819.1;Parent=gene-PUW31_16590;Dbxref=NCBI_GP:WJH07819.1;Name=WJH07819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462281.1;locus_tag=PUW31_16590;product=Maf family protein;protein_id=WJH07819.1;transl_table=11 CP118128.1 Genbank gene 3400538 3401026 . - . ID=gene-PUW31_16595;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=PUW31_16595 CP118128.1 Protein Homology CDS 3400538 3401026 . - 0 ID=cds-WJH10767.1;Parent=gene-PUW31_16595;Dbxref=NCBI_GP:WJH10767.1;Name=WJH10767.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=PUW31_16595;product=rod shape-determining protein MreD;protein_id=WJH10767.1;transl_table=11 CP118128.1 Genbank gene 3401029 3402081 . - . ID=gene-PUW31_16600;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=PUW31_16600 CP118128.1 Protein Homology CDS 3401029 3402081 . - 0 ID=cds-WJH07820.1;Parent=gene-PUW31_16600;Dbxref=NCBI_GP:WJH07820.1;Name=WJH07820.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462283.1;locus_tag=PUW31_16600;product=rod shape-determining protein MreC;protein_id=WJH07820.1;transl_table=11 CP118128.1 Genbank gene 3402146 3403189 . - . ID=gene-PUW31_16605;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=PUW31_16605 CP118128.1 Protein Homology CDS 3402146 3403189 . - 0 ID=cds-WJH07821.1;Parent=gene-PUW31_16605;Dbxref=NCBI_GP:WJH07821.1;Name=WJH07821.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=PUW31_16605;product=rod shape-determining protein MreB;protein_id=WJH07821.1;transl_table=11 CP118128.1 Genbank gene 3403497 3405437 . - . ID=gene-PUW31_16610;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=PUW31_16610 CP118128.1 Protein Homology CDS 3403497 3405437 . - 0 ID=cds-WJH07822.1;Parent=gene-PUW31_16610;Dbxref=NCBI_GP:WJH07822.1;Name=WJH07822.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462285.1;locus_tag=PUW31_16610;product=RNase E specificity factor CsrD;protein_id=WJH07822.1;transl_table=11 CP118128.1 Genbank gene 3405641 3406615 . + . ID=gene-PUW31_16615;Name=PUW31_16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16615 CP118128.1 Protein Homology CDS 3405641 3406615 . + 0 ID=cds-WJH07823.1;Parent=gene-PUW31_16615;Dbxref=NCBI_GP:WJH07823.1;Name=WJH07823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462286.1;locus_tag=PUW31_16615;product=oxidoreductase;protein_id=WJH07823.1;transl_table=11 CP118128.1 Genbank gene 3406728 3407732 . + . ID=gene-PUW31_16620;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=PUW31_16620 CP118128.1 Protein Homology CDS 3406728 3407732 . + 0 ID=cds-WJH07824.1;Parent=gene-PUW31_16620;Dbxref=NCBI_GP:WJH07824.1;Name=WJH07824.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462287.1;locus_tag=PUW31_16620;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WJH07824.1;transl_table=11 CP118128.1 Genbank gene 3407733 3408332 . + . ID=gene-PUW31_16625;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=PUW31_16625 CP118128.1 Protein Homology CDS 3407733 3408332 . + 0 ID=cds-WJH07825.1;Parent=gene-PUW31_16625;Dbxref=NCBI_GP:WJH07825.1;Name=WJH07825.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462288.1;locus_tag=PUW31_16625;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WJH07825.1;transl_table=11 CP118128.1 Genbank gene 3408725 3409195 . + . ID=gene-PUW31_16630;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=PUW31_16630 CP118128.1 Protein Homology CDS 3408725 3409195 . + 0 ID=cds-WJH07826.1;Parent=gene-PUW31_16630;Dbxref=NCBI_GP:WJH07826.1;Name=WJH07826.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462289.1;locus_tag=PUW31_16630;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WJH07826.1;transl_table=11 CP118128.1 Genbank gene 3409206 3410555 . + . ID=gene-PUW31_16635;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=PUW31_16635 CP118128.1 Protein Homology CDS 3409206 3410555 . + 0 ID=cds-WJH07827.1;Parent=gene-PUW31_16635;Dbxref=NCBI_GP:WJH07827.1;Name=WJH07827.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=PUW31_16635;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WJH07827.1;transl_table=11 CP118128.1 Genbank gene 3410664 3410906 . + . ID=gene-PUW31_16640;Name=PUW31_16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16640 CP118128.1 Protein Homology CDS 3410664 3410906 . + 0 ID=cds-WJH07828.1;Parent=gene-PUW31_16640;Dbxref=NCBI_GP:WJH07828.1;Name=WJH07828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462291.1;locus_tag=PUW31_16640;product=YhdT family protein;protein_id=WJH07828.1;transl_table=11 CP118128.1 Genbank pseudogene 3410896 3412346 . + . ID=gene-PUW31_16645;Name=panF;gbkey=Gene;gene=panF;gene_biotype=pseudogene;locus_tag=PUW31_16645;pseudo=true CP118128.1 Protein Homology CDS 3410896 3412346 . + 0 ID=cds-PUW31_16645;Parent=gene-PUW31_16645;Note=frameshifted;Ontology_term=GO:0015887,GO:0015937,GO:0015498;gbkey=CDS;gene=panF;go_function=pantothenate:sodium symporter activity|0015498||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462292.1;locus_tag=PUW31_16645;product=sodium/pantothenate symporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3412358 3413239 . + . ID=gene-PUW31_16650;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=PUW31_16650 CP118128.1 Protein Homology CDS 3412358 3413239 . + 0 ID=cds-WJH07829.1;Parent=gene-PUW31_16650;Dbxref=NCBI_GP:WJH07829.1;Name=WJH07829.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462293.1;locus_tag=PUW31_16650;product=50S ribosomal protein L11 methyltransferase;protein_id=WJH07829.1;transl_table=11 CP118128.1 Genbank gene 3413900 3414865 . + . ID=gene-PUW31_16655;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=PUW31_16655 CP118128.1 Protein Homology CDS 3413900 3414865 . + 0 ID=cds-WJH07830.1;Parent=gene-PUW31_16655;Dbxref=NCBI_GP:WJH07830.1;Name=WJH07830.1;Ontology_term=GO:0008033,GO:0003824,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=catalytic activity|0003824||IEA,oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=PUW31_16655;product=tRNA dihydrouridine synthase DusB;protein_id=WJH07830.1;transl_table=11 CP118128.1 Genbank gene 3414891 3415187 . + . ID=gene-PUW31_16660;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=PUW31_16660 CP118128.1 Protein Homology CDS 3414891 3415187 . + 0 ID=cds-WJH07831.1;Parent=gene-PUW31_16660;Dbxref=NCBI_GP:WJH07831.1;Name=WJH07831.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=PUW31_16660;product=DNA-binding transcriptional regulator Fis;protein_id=WJH07831.1;transl_table=11 CP118128.1 Genbank gene 3415273 3416157 . + . ID=gene-PUW31_16665;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=PUW31_16665 CP118128.1 Protein Homology CDS 3415273 3416157 . + 0 ID=cds-WJH07832.1;Parent=gene-PUW31_16665;Dbxref=NCBI_GP:WJH07832.1;Name=WJH07832.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462296.1;locus_tag=PUW31_16665;product=adenine-specific DNA-methyltransferase;protein_id=WJH07832.1;transl_table=11 CP118128.1 Genbank gene 3416240 3416404 . + . ID=gene-PUW31_16670;Name=PUW31_16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16670 CP118128.1 Protein Homology CDS 3416240 3416404 . + 0 ID=cds-WJH07833.1;Parent=gene-PUW31_16670;Dbxref=NCBI_GP:WJH07833.1;Name=WJH07833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462297.1;locus_tag=PUW31_16670;product=DUF2556 family protein;protein_id=WJH07833.1;transl_table=11 CP118128.1 Genbank gene 3416555 3418654 . + . ID=gene-PUW31_16675;Name=PUW31_16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16675 CP118128.1 Protein Homology CDS 3416555 3418654 . + 0 ID=cds-WJH07834.1;Parent=gene-PUW31_16675;Dbxref=NCBI_GP:WJH07834.1;Name=WJH07834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462298.1;locus_tag=PUW31_16675;product=EAL domain-containing protein;protein_id=WJH07834.1;transl_table=11 CP118128.1 Genbank gene 3418657 3419319 . - . ID=gene-PUW31_16680;Name=envR;gbkey=Gene;gene=envR;gene_biotype=protein_coding;locus_tag=PUW31_16680 CP118128.1 Protein Homology CDS 3418657 3419319 . - 0 ID=cds-WJH07835.1;Parent=gene-PUW31_16680;Dbxref=NCBI_GP:WJH07835.1;Name=WJH07835.1;gbkey=CDS;gene=envR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462299.1;locus_tag=PUW31_16680;product=acrEF/envCD operon transcriptional regulator;protein_id=WJH07835.1;transl_table=11 CP118128.1 Genbank pseudogene 3419732 3420888 . + . ID=gene-PUW31_16685;Name=PUW31_16685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_16685;pseudo=true CP118128.1 Protein Homology CDS 3419732 3420888 . + 0 ID=cds-PUW31_16685;Parent=gene-PUW31_16685;Note=frameshifted;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462300.1;locus_tag=PUW31_16685;product=efflux RND transporter periplasmic adaptor subunit;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 3420900 3424012 . + . ID=gene-PUW31_16690;Name=PUW31_16690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_16690;pseudo=true CP118128.1 Protein Homology CDS 3420900 3424012 . + 0 ID=cds-PUW31_16690;Parent=gene-PUW31_16690;Note=frameshifted;Ontology_term=GO:0006810,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462301.1;locus_tag=PUW31_16690;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3424250 3424471 . + . ID=gene-PUW31_16695;Name=PUW31_16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16695 CP118128.1 Protein Homology CDS 3424250 3424471 . + 0 ID=cds-WJH07836.1;Parent=gene-PUW31_16695;Dbxref=NCBI_GP:WJH07836.1;Name=WJH07836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462302.1;locus_tag=PUW31_16695;product=hypothetical protein;protein_id=WJH07836.1;transl_table=11 CP118128.1 Genbank gene 3425255 3425370 . - . ID=gene-PUW31_16700;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW31_16700 CP118128.1 cmsearch rRNA 3425255 3425370 . - . ID=rna-PUW31_16700;Parent=gene-PUW31_16700;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_16700;product=5S ribosomal RNA CP118128.1 cmsearch exon 3425255 3425370 . - . ID=exon-PUW31_16700-1;Parent=rna-PUW31_16700;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_16700;product=5S ribosomal RNA CP118128.1 Genbank gene 3425410 3425485 . - . ID=gene-PUW31_16705;Name=PUW31_16705;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_16705 CP118128.1 tRNAscan-SE tRNA 3425410 3425485 . - . ID=rna-PUW31_16705;Parent=gene-PUW31_16705;anticodon=(pos:complement(3425450..3425452));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_16705;product=tRNA-Thr CP118128.1 tRNAscan-SE exon 3425410 3425485 . - . ID=exon-PUW31_16705-1;Parent=rna-PUW31_16705;anticodon=(pos:complement(3425450..3425452));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_16705;product=tRNA-Thr CP118128.1 Genbank gene 3425500 3425615 . - . ID=gene-PUW31_16710;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW31_16710 CP118128.1 cmsearch rRNA 3425500 3425615 . - . ID=rna-PUW31_16710;Parent=gene-PUW31_16710;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_16710;product=5S ribosomal RNA CP118128.1 cmsearch exon 3425500 3425615 . - . ID=exon-PUW31_16710-1;Parent=rna-PUW31_16710;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_16710;product=5S ribosomal RNA CP118128.1 Genbank gene 3425812 3428800 . - . ID=gene-PUW31_16715;Name=PUW31_16715;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW31_16715 CP118128.1 cmsearch rRNA 3425812 3428800 . - . ID=rna-PUW31_16715;Parent=gene-PUW31_16715;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_16715;product=23S ribosomal RNA CP118128.1 cmsearch exon 3425812 3428800 . - . ID=exon-PUW31_16715-1;Parent=rna-PUW31_16715;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_16715;product=23S ribosomal RNA CP118128.1 Genbank gene 3428983 3429058 . - . ID=gene-PUW31_16720;Name=PUW31_16720;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_16720 CP118128.1 tRNAscan-SE tRNA 3428983 3429058 . - . ID=rna-PUW31_16720;Parent=gene-PUW31_16720;anticodon=(pos:complement(3429023..3429025));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_16720;product=tRNA-Ala CP118128.1 tRNAscan-SE exon 3428983 3429058 . - . ID=exon-PUW31_16720-1;Parent=rna-PUW31_16720;anticodon=(pos:complement(3429023..3429025));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_16720;product=tRNA-Ala CP118128.1 Genbank gene 3429170 3429246 . - . ID=gene-PUW31_16725;Name=PUW31_16725;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_16725 CP118128.1 tRNAscan-SE tRNA 3429170 3429246 . - . ID=rna-PUW31_16725;Parent=gene-PUW31_16725;anticodon=(pos:complement(3429210..3429212));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_16725;product=tRNA-Ile CP118128.1 tRNAscan-SE exon 3429170 3429246 . - . ID=exon-PUW31_16725-1;Parent=rna-PUW31_16725;anticodon=(pos:complement(3429210..3429212));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_16725;product=tRNA-Ile CP118128.1 Genbank gene 3429316 3430857 . - . ID=gene-PUW31_16730;Name=PUW31_16730;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW31_16730 CP118128.1 cmsearch rRNA 3429316 3430857 . - . ID=rna-PUW31_16730;Parent=gene-PUW31_16730;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_16730;product=16S ribosomal RNA CP118128.1 cmsearch exon 3429316 3430857 . - . ID=exon-PUW31_16730-1;Parent=rna-PUW31_16730;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_16730;product=16S ribosomal RNA CP118128.1 Genbank gene 3431240 3432091 . - . ID=gene-PUW31_16735;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=PUW31_16735 CP118128.1 Protein Homology CDS 3431240 3432091 . - 0 ID=cds-WJH07837.1;Parent=gene-PUW31_16735;Dbxref=NCBI_GP:WJH07837.1;Name=WJH07837.1;Ontology_term=GO:0006807,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463010.1;locus_tag=PUW31_16735;product=glutamate racemase;protein_id=WJH07837.1;transl_table=11 CP118128.1 Genbank pseudogene 3432036 3433880 . - . ID=gene-PUW31_16740;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=pseudogene;locus_tag=PUW31_16740;pseudo=true CP118128.1 Protein Homology CDS 3432036 3433880 . - 0 ID=cds-PUW31_16740;Parent=gene-PUW31_16740;Note=internal stop;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463009.1;locus_tag=PUW31_16740;product=TonB-dependent vitamin B12 receptor BtuB;pseudo=true;transl_table=11 CP118128.1 cmsearch riboswitch 3433946 3434139 . - . ID=id-CP118128.1:3433946..3434139;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118128.1 Genbank gene 3434254 3435354 . + . ID=gene-PUW31_16745;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=PUW31_16745 CP118128.1 Protein Homology CDS 3434254 3435354 . + 0 ID=cds-WJH07838.1;Parent=gene-PUW31_16745;Dbxref=NCBI_GP:WJH07838.1;Name=WJH07838.1;Ontology_term=GO:0006400,GO:0030697;gbkey=CDS;gene=trmA;go_function=S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity|0030697||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463008.1;locus_tag=PUW31_16745;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WJH07838.1;transl_table=11 CP118128.1 Genbank pseudogene 3435404 3435760 . - . ID=gene-PUW31_16750;Name=PUW31_16750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_16750;pseudo=true CP118128.1 Protein Homology CDS 3435404 3435760 . - 0 ID=cds-PUW31_16750;Parent=gene-PUW31_16750;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463007.1;locus_tag=PUW31_16750;product=YijD family membrane protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3435776 3436411 . - . ID=gene-PUW31_16755;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=PUW31_16755 CP118128.1 Protein Homology CDS 3435776 3436411 . - 0 ID=cds-WJH07839.1;Parent=gene-PUW31_16755;Dbxref=NCBI_GP:WJH07839.1;Name=WJH07839.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463006.3;locus_tag=PUW31_16755;product=HTH-type transcriptional repressor FabR;protein_id=WJH07839.1;transl_table=11 CP118128.1 Genbank gene 3436610 3438010 . + . ID=gene-PUW31_16760;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=PUW31_16760 CP118128.1 Protein Homology CDS 3436610 3438010 . + 0 ID=cds-WJH07840.1;Parent=gene-PUW31_16760;Dbxref=NCBI_GP:WJH07840.1;Name=WJH07840.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (B-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=PUW31_16760;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WJH07840.1;transl_table=11 CP118128.1 Genbank gene 3437993 3438910 . - . ID=gene-PUW31_16765;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=PUW31_16765 CP118128.1 Protein Homology CDS 3437993 3438910 . - 0 ID=cds-WJH07841.1;Parent=gene-PUW31_16765;Dbxref=NCBI_GP:WJH07841.1;Name=WJH07841.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=PUW31_16765;product=DNA-binding transcriptional regulator OxyR;protein_id=WJH07841.1;transl_table=11 CP118128.1 Genbank gene 3439194 3440570 . - . ID=gene-PUW31_16770;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=PUW31_16770 CP118128.1 Protein Homology CDS 3439194 3440570 . - 0 ID=cds-WJH07842.1;Parent=gene-PUW31_16770;Dbxref=NCBI_GP:WJH07842.1;Name=WJH07842.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463003.1;locus_tag=PUW31_16770;product=argininosuccinate lyase;protein_id=WJH07842.1;transl_table=11 CP118128.1 Genbank gene 3440688 3441464 . - . ID=gene-PUW31_16775;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=PUW31_16775 CP118128.1 Protein Homology CDS 3440688 3441464 . - 0 ID=cds-WJH07843.1;Parent=gene-PUW31_16775;Dbxref=NCBI_GP:WJH07843.1;Name=WJH07843.1;Ontology_term=GO:0006592,GO:0003991;gbkey=CDS;gene=argB;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463002.3;locus_tag=PUW31_16775;product=acetylglutamate kinase;protein_id=WJH07843.1;transl_table=11 CP118128.1 Genbank pseudogene 3441472 3442475 . - . ID=gene-PUW31_16780;Name=argC;gbkey=Gene;gene=argC;gene_biotype=pseudogene;locus_tag=PUW31_16780;pseudo=true CP118128.1 Protein Homology CDS 3441472 3442475 . - 0 ID=cds-PUW31_16780;Parent=gene-PUW31_16780;Note=frameshifted;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=PUW31_16780;product=N-acetyl-gamma-glutamyl-phosphate reductase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3442564 3443715 . + . ID=gene-PUW31_16785;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=PUW31_16785 CP118128.1 Protein Homology CDS 3442564 3443715 . + 0 ID=cds-WJH07844.1;Parent=gene-PUW31_16785;Dbxref=NCBI_GP:WJH07844.1;Name=WJH07844.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463000.1;locus_tag=PUW31_16785;product=acetylornithine deacetylase;protein_id=WJH07844.1;transl_table=11 CP118128.1 Genbank gene 3444084 3446735 . + . ID=gene-PUW31_16790;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=PUW31_16790 CP118128.1 Protein Homology CDS 3444084 3446735 . + 0 ID=cds-WJH07845.1;Parent=gene-PUW31_16790;Dbxref=NCBI_GP:WJH07845.1;Name=WJH07845.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=PUW31_16790;product=phosphoenolpyruvate carboxylase;protein_id=WJH07845.1;transl_table=11 CP118128.1 Genbank pseudogene 3446946 3448678 . + . ID=gene-PUW31_16795;Name=PUW31_16795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_16795;pseudo=true CP118128.1 Protein Homology CDS 3446946 3448678 . + 0 ID=cds-PUW31_16795;Parent=gene-PUW31_16795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462998.1;locus_tag=PUW31_16795;product=phosphoethanolamine transferase CptA;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3448839 3449690 . + . ID=gene-PUW31_16800;Name=PUW31_16800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16800 CP118128.1 Protein Homology CDS 3448839 3449690 . + 0 ID=cds-WJH07846.1;Parent=gene-PUW31_16800;Dbxref=NCBI_GP:WJH07846.1;Name=WJH07846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462997.1;locus_tag=PUW31_16800;product=AraC family transcriptional regulator;protein_id=WJH07846.1;transl_table=11 CP118128.1 Genbank gene 3449677 3450030 . - . ID=gene-PUW31_16805;Name=PUW31_16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16805 CP118128.1 Protein Homology CDS 3449677 3450030 . - 0 ID=cds-WJH07847.1;Parent=gene-PUW31_16805;Dbxref=NCBI_GP:WJH07847.1;Name=WJH07847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462996.1;locus_tag=PUW31_16805;product=PTS fructose-like transporter subunit IIB;protein_id=WJH07847.1;transl_table=11 CP118128.1 Genbank gene 3450032 3450910 . - . ID=gene-PUW31_16810;Name=PUW31_16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16810 CP118128.1 Protein Homology CDS 3450032 3450910 . - 0 ID=cds-WJH07848.1;Parent=gene-PUW31_16810;Dbxref=NCBI_GP:WJH07848.1;Name=WJH07848.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462995.1;locus_tag=PUW31_16810;product=[formate-C-acetyltransferase]-activating enzyme;protein_id=WJH07848.1;transl_table=11 CP118128.1 Genbank pseudogene 3450876 3453172 . - . ID=gene-PUW31_16815;Name=PUW31_16815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_16815;pseudo=true CP118128.1 Protein Homology CDS 3450876 3453172 . - 0 ID=cds-PUW31_16815;Parent=gene-PUW31_16815;Note=frameshifted;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462994.1;locus_tag=PUW31_16815;product=formate C-acetyltransferase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3453271 3453591 . - . ID=gene-PUW31_16820;Name=PUW31_16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16820 CP118128.1 Protein Homology CDS 3453271 3453591 . - 0 ID=cds-WJH07849.1;Parent=gene-PUW31_16820;Dbxref=NCBI_GP:WJH07849.1;Name=WJH07849.1;Ontology_term=GO:0009401,GO:0022877;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462993.1;locus_tag=PUW31_16820;product=PTS fructose-like transporter subunit IIB;protein_id=WJH07849.1;transl_table=11 CP118128.1 Genbank gene 3453606 3454685 . - . ID=gene-PUW31_16825;Name=PUW31_16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16825 CP118128.1 Protein Homology CDS 3453606 3454685 . - 0 ID=cds-WJH07850.1;Parent=gene-PUW31_16825;Dbxref=NCBI_GP:WJH07850.1;Name=WJH07850.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462992.1;locus_tag=PUW31_16825;product=PTS fructose transporter subunit EIIC;protein_id=WJH07850.1;transl_table=11 CP118128.1 Genbank pseudogene 3454994 3457495 . + . ID=gene-PUW31_16830;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=pseudogene;locus_tag=PUW31_16830;pseudo=true CP118128.1 Protein Homology CDS 3454994 3457495 . + 0 ID=cds-PUW31_16830;Parent=gene-PUW31_16830;Note=internal stop;Ontology_term=GO:0006808,GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=regulation of nitrogen utilization|0006808||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462991.1;locus_tag=PUW31_16830;product=phosphoenolpyruvate--protein phosphotransferase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3457506 3458168 . + . ID=gene-PUW31_16835;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=PUW31_16835 CP118128.1 Protein Homology CDS 3457506 3458168 . + 0 ID=cds-WJH07851.1;Parent=gene-PUW31_16835;Dbxref=NCBI_GP:WJH07851.1;Name=WJH07851.1;Ontology_term=GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462990.1;locus_tag=PUW31_16835;product=fructose-6-phosphate aldolase;protein_id=WJH07851.1;transl_table=11 CP118128.1 Genbank gene 3458180 3459283 . + . ID=gene-PUW31_16840;Name=PUW31_16840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16840 CP118128.1 Protein Homology CDS 3458180 3459283 . + 0 ID=cds-WJH07852.1;Parent=gene-PUW31_16840;Dbxref=NCBI_GP:WJH07852.1;Name=WJH07852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462989.1;locus_tag=PUW31_16840;product=glycerol dehydrogenase;protein_id=WJH07852.1;transl_table=11 CP118128.1 Genbank gene 3459542 3460165 . + . ID=gene-PUW31_16845;Name=PUW31_16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16845 CP118128.1 Protein Homology CDS 3459542 3460165 . + 0 ID=cds-WJH07853.1;Parent=gene-PUW31_16845;Dbxref=NCBI_GP:WJH07853.1;Name=WJH07853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462988.1;locus_tag=PUW31_16845;product=DUF1287 domain-containing protein;protein_id=WJH07853.1;transl_table=11 CP118128.1 Genbank gene 3460223 3462403 . - . ID=gene-PUW31_16850;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=PUW31_16850 CP118128.1 Protein Homology CDS 3460223 3462403 . - 0 ID=cds-WJH07854.1;Parent=gene-PUW31_16850;Dbxref=NCBI_GP:WJH07854.1;Name=WJH07854.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462987.1;locus_tag=PUW31_16850;product=catalase/peroxidase HPI;protein_id=WJH07854.1;transl_table=11 CP118128.1 Genbank gene 3462568 3463458 . - . ID=gene-PUW31_16855;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=PUW31_16855 CP118128.1 Protein Homology CDS 3462568 3463458 . - 0 ID=cds-WJH07855.1;Parent=gene-PUW31_16855;Dbxref=NCBI_GP:WJH07855.1;Name=WJH07855.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462986.1;locus_tag=PUW31_16855;product=methylenetetrahydrofolate reductase;protein_id=WJH07855.1;transl_table=11 CP118128.1 Genbank gene 3463737 3465218 . + . ID=gene-PUW31_16860;Name=PUW31_16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16860 CP118128.1 Protein Homology CDS 3463737 3465218 . + 0 ID=cds-WJH07856.1;Parent=gene-PUW31_16860;Dbxref=NCBI_GP:WJH07856.1;Name=WJH07856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001090461.1;locus_tag=PUW31_16860;product=PLP-dependent aminotransferase family protein;protein_id=WJH07856.1;transl_table=11 CP118128.1 Genbank gene 3465163 3466239 . - . ID=gene-PUW31_16865;Name=PUW31_16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16865 CP118128.1 Protein Homology CDS 3465163 3466239 . - 0 ID=cds-WJH07857.1;Parent=gene-PUW31_16865;Dbxref=NCBI_GP:WJH07857.1;Name=WJH07857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976816.1;locus_tag=PUW31_16865;product=alanine racemase 3;protein_id=WJH07857.1;transl_table=11 CP118128.1 Genbank gene 3466236 3467474 . - . ID=gene-PUW31_16870;Name=PUW31_16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16870 CP118128.1 Protein Homology CDS 3466236 3467474 . - 0 ID=cds-WJH07858.1;Parent=gene-PUW31_16870;Dbxref=NCBI_GP:WJH07858.1;Name=WJH07858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014341216.1;locus_tag=PUW31_16870;product=serine hydroxymethyltransferase;protein_id=WJH07858.1;transl_table=11 CP118128.1 Genbank gene 3467738 3469294 . - . ID=gene-PUW31_16875;Name=PUW31_16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16875 CP118128.1 Protein Homology CDS 3467738 3469294 . - 0 ID=cds-WJH07859.1;Parent=gene-PUW31_16875;Dbxref=NCBI_GP:WJH07859.1;Name=WJH07859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462985.1;locus_tag=PUW31_16875;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;protein_id=WJH07859.1;transl_table=11 CP118128.1 Genbank gene 3469430 3470554 . + . ID=gene-PUW31_16880;Name=PUW31_16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16880 CP118128.1 Protein Homology CDS 3469430 3470554 . + 0 ID=cds-WJH07860.1;Parent=gene-PUW31_16880;Dbxref=NCBI_GP:WJH07860.1;Name=WJH07860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462984.1;locus_tag=PUW31_16880;product=cytoplasmic protein;protein_id=WJH07860.1;transl_table=11 CP118128.1 Genbank gene 3470789 3471787 . + . ID=gene-PUW31_16885;Name=PUW31_16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16885 CP118128.1 Protein Homology CDS 3470789 3471787 . + 0 ID=cds-WJH07861.1;Parent=gene-PUW31_16885;Dbxref=NCBI_GP:WJH07861.1;Name=WJH07861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406820.1;locus_tag=PUW31_16885;product=hypothetical protein;protein_id=WJH07861.1;transl_table=11 CP118128.1 Genbank gene 3471790 3472647 . + . ID=gene-PUW31_16890;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=PUW31_16890 CP118128.1 Protein Homology CDS 3471790 3472647 . + 0 ID=cds-WJH07862.1;Parent=gene-PUW31_16890;Dbxref=NCBI_GP:WJH07862.1;Name=WJH07862.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462983.1;locus_tag=PUW31_16890;product=small-conductance mechanosensitive channel MscS;protein_id=WJH07862.1;transl_table=11 CP118128.1 Genbank pseudogene 3472763 3475193 . - . ID=gene-PUW31_16895;Name=PUW31_16895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_16895;pseudo=true CP118128.1 Protein Homology CDS 3472763 3475193 . - 0 ID=cds-PUW31_16895;Parent=gene-PUW31_16895;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=PUW31_16895;product=bifunctional aspartate kinase/homoserine dehydrogenase II;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3475196 3476356 . - . ID=gene-PUW31_16900;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=PUW31_16900 CP118128.1 Protein Homology CDS 3475196 3476356 . - 0 ID=cds-WJH10768.1;Parent=gene-PUW31_16900;Dbxref=NCBI_GP:WJH10768.1;Name=WJH10768.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462981.1;locus_tag=PUW31_16900;product=cystathionine gamma-synthase;protein_id=WJH10768.1;transl_table=11 CP118128.1 Genbank gene 3476621 3476938 . + . ID=gene-PUW31_16905;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=PUW31_16905 CP118128.1 Protein Homology CDS 3476621 3476938 . + 0 ID=cds-WJH07863.1;Parent=gene-PUW31_16905;Dbxref=NCBI_GP:WJH07863.1;Name=WJH07863.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=PUW31_16905;product=met regulon transcriptional regulator MetJ;protein_id=WJH07863.1;transl_table=11 CP118128.1 Genbank pseudogene 3477394 3479182 . + . ID=gene-PUW31_16910;Name=PUW31_16910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_16910;pseudo=true CP118128.1 Protein Homology CDS 3477394 3479182 . + 0 ID=cds-PUW31_16910;Parent=gene-PUW31_16910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462979.1;locus_tag=PUW31_16910;product=aryl-sulfate sulfotransferase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3479383 3480045 . + . ID=gene-PUW31_16915;Name=PUW31_16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16915 CP118128.1 Protein Homology CDS 3479383 3480045 . + 0 ID=cds-WJH07864.1;Parent=gene-PUW31_16915;Dbxref=NCBI_GP:WJH07864.1;Name=WJH07864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462978.1;locus_tag=PUW31_16915;product=TIGR02117 family protein;protein_id=WJH07864.1;transl_table=11 CP118128.1 Genbank gene 3480090 3480302 . - . ID=gene-PUW31_16920;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=PUW31_16920 CP118128.1 Protein Homology CDS 3480090 3480302 . - 0 ID=cds-WJH10769.1;Parent=gene-PUW31_16920;Dbxref=NCBI_GP:WJH10769.1;Name=WJH10769.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmE;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462977.1;locus_tag=PUW31_16920;product=50S ribosomal protein L31;protein_id=WJH10769.1;transl_table=11 CP118128.1 Genbank gene 3480506 3482704 . + . ID=gene-PUW31_16925;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=PUW31_16925 CP118128.1 Protein Homology CDS 3480506 3482704 . + 0 ID=cds-WJH07865.1;Parent=gene-PUW31_16925;Dbxref=NCBI_GP:WJH07865.1;Name=WJH07865.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462976.1;locus_tag=PUW31_16925;product=primosomal protein N';protein_id=WJH07865.1;transl_table=11 CP118128.1 Genbank gene 3482859 3483884 . + . ID=gene-PUW31_16930;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=PUW31_16930 CP118128.1 Protein Homology CDS 3482859 3483884 . + 0 ID=cds-WJH07866.1;Parent=gene-PUW31_16930;Dbxref=NCBI_GP:WJH07866.1;Name=WJH07866.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462975.1;locus_tag=PUW31_16930;product=DNA-binding transcriptional regulator CytR;protein_id=WJH07866.1;transl_table=11 CP118128.1 Genbank gene 3483978 3484952 . + . ID=gene-PUW31_16935;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=PUW31_16935 CP118128.1 Protein Homology CDS 3483978 3484952 . + 0 ID=cds-WJH07867.1;Parent=gene-PUW31_16935;Dbxref=NCBI_GP:WJH07867.1;Name=WJH07867.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462974.1;locus_tag=PUW31_16935;product=cell division protein FtsN;protein_id=WJH07867.1;transl_table=11 CP118128.1 Genbank gene 3485044 3485574 . + . ID=gene-PUW31_16940;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=PUW31_16940 CP118128.1 Protein Homology CDS 3485044 3485574 . + 0 ID=cds-WJH07868.1;Parent=gene-PUW31_16940;Dbxref=NCBI_GP:WJH07868.1;Name=WJH07868.1;Ontology_term=GO:0051603,GO:0004298;gbkey=CDS;gene=hslV;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462973.1;locus_tag=PUW31_16940;product=ATP-dependent protease subunit HslV;protein_id=WJH07868.1;transl_table=11 CP118128.1 Genbank gene 3485584 3486915 . + . ID=gene-PUW31_16945;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=PUW31_16945 CP118128.1 Protein Homology CDS 3485584 3486915 . + 0 ID=cds-WJH07869.1;Parent=gene-PUW31_16945;Dbxref=NCBI_GP:WJH07869.1;Name=WJH07869.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524;gbkey=CDS;gene=hslU;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=PUW31_16945;product=HslU--HslV peptidase ATPase subunit;protein_id=WJH07869.1;transl_table=11 CP118128.1 Genbank gene 3486982 3487911 . + . ID=gene-PUW31_16950;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=PUW31_16950 CP118128.1 Protein Homology CDS 3486982 3487911 . + 0 ID=cds-WJH07870.1;Parent=gene-PUW31_16950;Dbxref=NCBI_GP:WJH07870.1;Name=WJH07870.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462971.1;locus_tag=PUW31_16950;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WJH07870.1;transl_table=11 CP118128.1 Genbank gene 3488004 3488489 . + . ID=gene-PUW31_16955;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=PUW31_16955 CP118128.1 Protein Homology CDS 3488004 3488489 . + 0 ID=cds-WJH07871.1;Parent=gene-PUW31_16955;Dbxref=NCBI_GP:WJH07871.1;Name=WJH07871.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=PUW31_16955;product=ribonuclease E activity regulator RraA;protein_id=WJH07871.1;transl_table=11 CP118128.1 Genbank gene 3488711 3488950 . - . ID=gene-PUW31_16960;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=PUW31_16960 CP118128.1 Protein Homology CDS 3488711 3488950 . - 0 ID=cds-WJH07872.1;Parent=gene-PUW31_16960;Dbxref=NCBI_GP:WJH07872.1;Name=WJH07872.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229475.1;locus_tag=PUW31_16960;product=septal ring assembly protein ZapB;protein_id=WJH07872.1;transl_table=11 CP118128.1 Genbank gene 3489349 3490194 . + . ID=gene-PUW31_16965;Name=PUW31_16965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16965 CP118128.1 Protein Homology CDS 3489349 3490194 . + 0 ID=cds-WJH07873.1;Parent=gene-PUW31_16965;Dbxref=NCBI_GP:WJH07873.1;Name=WJH07873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462968.1;locus_tag=PUW31_16965;product=aquaporin;protein_id=WJH07873.1;transl_table=11 CP118128.1 Genbank gene 3490215 3491723 . + . ID=gene-PUW31_16970;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=PUW31_16970 CP118128.1 Protein Homology CDS 3490215 3491723 . + 0 ID=cds-WJH07874.1;Parent=gene-PUW31_16970;Dbxref=NCBI_GP:WJH07874.1;Name=WJH07874.1;Ontology_term=GO:0006071,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462967.1;locus_tag=PUW31_16970;product=glycerol kinase GlpK;protein_id=WJH07874.1;transl_table=11 CP118128.1 Genbank gene 3491835 3492845 . + . ID=gene-PUW31_16975;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=PUW31_16975 CP118128.1 Protein Homology CDS 3491835 3492845 . + 0 ID=cds-WJH07875.1;Parent=gene-PUW31_16975;Dbxref=NCBI_GP:WJH07875.1;Name=WJH07875.1;Ontology_term=GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462966.1;locus_tag=PUW31_16975;product=class II fructose-bisphosphatase;protein_id=WJH07875.1;transl_table=11 CP118128.1 Genbank gene 3492942 3493688 . + . ID=gene-PUW31_16980;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=PUW31_16980 CP118128.1 Protein Homology CDS 3492942 3493688 . + 0 ID=cds-WJH07876.1;Parent=gene-PUW31_16980;Dbxref=NCBI_GP:WJH07876.1;Name=WJH07876.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462965.1;locus_tag=PUW31_16980;product=ferredoxin--NADP(+) reductase;protein_id=WJH07876.1;transl_table=11 CP118128.1 Genbank gene 3493794 3494222 . - . ID=gene-PUW31_16985;Name=PUW31_16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16985 CP118128.1 Protein Homology CDS 3493794 3494222 . - 0 ID=cds-WJH07877.1;Parent=gene-PUW31_16985;Dbxref=NCBI_GP:WJH07877.1;Name=WJH07877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006724708.1;locus_tag=PUW31_16985;product=DUF805 domain-containing protein;protein_id=WJH07877.1;transl_table=11 CP118128.1 Genbank gene 3494323 3494919 . + . ID=gene-PUW31_16990;Name=PUW31_16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_16990 CP118128.1 Protein Homology CDS 3494323 3494919 . + 0 ID=cds-WJH07878.1;Parent=gene-PUW31_16990;Dbxref=NCBI_GP:WJH07878.1;Name=WJH07878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462963.1;locus_tag=PUW31_16990;product=YiiQ family protein;protein_id=WJH07878.1;transl_table=11 CP118128.1 Genbank gene 3495032 3495799 . + . ID=gene-PUW31_16995;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=PUW31_16995 CP118128.1 Protein Homology CDS 3495032 3495799 . + 0 ID=cds-WJH07879.1;Parent=gene-PUW31_16995;Dbxref=NCBI_GP:WJH07879.1;Name=WJH07879.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462962.1;locus_tag=PUW31_16995;product=triose-phosphate isomerase;protein_id=WJH07879.1;transl_table=11 CP118128.1 Genbank gene 3495891 3496655 . - . ID=gene-PUW31_17000;Name=PUW31_17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17000 CP118128.1 Protein Homology CDS 3495891 3496655 . - 0 ID=cds-WJH07880.1;Parent=gene-PUW31_17000;Dbxref=NCBI_GP:WJH07880.1;Name=WJH07880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462961.1;locus_tag=PUW31_17000;product=epimerase;protein_id=WJH07880.1;transl_table=11 CP118128.1 Genbank gene 3496665 3496955 . - . ID=gene-PUW31_17005;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=PUW31_17005 CP118128.1 Protein Homology CDS 3496665 3496955 . - 0 ID=cds-WJH10770.1;Parent=gene-PUW31_17005;Dbxref=NCBI_GP:WJH10770.1;Name=WJH10770.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=PUW31_17005;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WJH10770.1;transl_table=11 CP118128.1 Genbank gene 3497037 3497912 . - . ID=gene-PUW31_17010;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=PUW31_17010 CP118128.1 Protein Homology CDS 3497037 3497912 . - 0 ID=cds-WJH07881.1;Parent=gene-PUW31_17010;Dbxref=NCBI_GP:WJH07881.1;Name=WJH07881.1;Ontology_term=GO:0016829;gbkey=CDS;gene=lsrF;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774144.1;locus_tag=PUW31_17010;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase;protein_id=WJH07881.1;transl_table=11 CP118128.1 Genbank gene 3497941 3498963 . - . ID=gene-PUW31_17015;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=PUW31_17015 CP118128.1 Protein Homology CDS 3497941 3498963 . - 0 ID=cds-WJH07882.1;Parent=gene-PUW31_17015;Dbxref=NCBI_GP:WJH07882.1;Name=WJH07882.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462958.1;locus_tag=PUW31_17015;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WJH07882.1;transl_table=11 CP118128.1 Genbank gene 3498992 3499993 . - . ID=gene-PUW31_17020;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=PUW31_17020 CP118128.1 Protein Homology CDS 3498992 3499993 . - 0 ID=cds-WJH07883.1;Parent=gene-PUW31_17020;Dbxref=NCBI_GP:WJH07883.1;Name=WJH07883.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462957.1;locus_tag=PUW31_17020;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WJH07883.1;transl_table=11 CP118128.1 Genbank gene 3499990 3501033 . - . ID=gene-PUW31_17025;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=PUW31_17025 CP118128.1 Protein Homology CDS 3499990 3501033 . - 0 ID=cds-WJH07884.1;Parent=gene-PUW31_17025;Dbxref=NCBI_GP:WJH07884.1;Name=WJH07884.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462956.1;locus_tag=PUW31_17025;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WJH07884.1;transl_table=11 CP118128.1 Genbank gene 3501027 3502562 . - . ID=gene-PUW31_17030;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=PUW31_17030 CP118128.1 Protein Homology CDS 3501027 3502562 . - 0 ID=cds-WJH07885.1;Parent=gene-PUW31_17030;Dbxref=NCBI_GP:WJH07885.1;Name=WJH07885.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462955.1;locus_tag=PUW31_17030;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WJH07885.1;transl_table=11 CP118128.1 Genbank gene 3502819 3503778 . + . ID=gene-PUW31_17035;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=PUW31_17035 CP118128.1 Protein Homology CDS 3502819 3503778 . + 0 ID=cds-WJH07886.1;Parent=gene-PUW31_17035;Dbxref=NCBI_GP:WJH07886.1;Name=WJH07886.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462954.1;locus_tag=PUW31_17035;product=transcriptional regulator LsrR;protein_id=WJH07886.1;transl_table=11 CP118128.1 Genbank gene 3503865 3505457 . + . ID=gene-PUW31_17040;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=PUW31_17040 CP118128.1 Protein Homology CDS 3503865 3505457 . + 0 ID=cds-WJH07887.1;Parent=gene-PUW31_17040;Dbxref=NCBI_GP:WJH07887.1;Name=WJH07887.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462953.1;locus_tag=PUW31_17040;product=autoinducer-2 kinase;protein_id=WJH07887.1;transl_table=11 CP118128.1 Genbank gene 3505471 3505821 . + . ID=gene-PUW31_17045;Name=PUW31_17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17045 CP118128.1 Protein Homology CDS 3505471 3505821 . + 0 ID=cds-WJH07888.1;Parent=gene-PUW31_17045;Dbxref=NCBI_GP:WJH07888.1;Name=WJH07888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742380.1;locus_tag=PUW31_17045;product=cupin domain-containing protein;protein_id=WJH07888.1;transl_table=11 CP118128.1 Genbank pseudogene 3505911 3506051 . - . ID=gene-PUW31_17050;Name=PUW31_17050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_17050;pseudo=true CP118128.1 Protein Homology CDS 3505911 3506051 . - 0 ID=cds-PUW31_17050;Parent=gene-PUW31_17050;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0008654,GO:0008715,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol diphosphatase activity|0008715||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=PUW31_17050;product=CDP-diacylglycerol diphosphatase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 3506109 3506228 . - . ID=gene-PUW31_17055;Name=PUW31_17055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_17055;pseudo=true CP118128.1 Protein Homology CDS 3506109 3506228 . - 0 ID=cds-PUW31_17055;Parent=gene-PUW31_17055;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229472.1;locus_tag=PUW31_17055;product=hypothetical protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3506326 3507048 . - . ID=gene-PUW31_17060;Name=PUW31_17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17060 CP118128.1 Protein Homology CDS 3506326 3507048 . - 0 ID=cds-WJH07889.1;Parent=gene-PUW31_17060;Dbxref=NCBI_GP:WJH07889.1;Name=WJH07889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462949.1;locus_tag=PUW31_17060;product=GntR family transcriptional regulator;protein_id=WJH07889.1;transl_table=11 CP118128.1 Genbank gene 3507111 3508151 . - . ID=gene-PUW31_17065;Name=PUW31_17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17065 CP118128.1 Protein Homology CDS 3507111 3508151 . - 0 ID=cds-WJH07890.1;Parent=gene-PUW31_17065;Dbxref=NCBI_GP:WJH07890.1;Name=WJH07890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462948.1;locus_tag=PUW31_17065;product=ADP-ribosylglycohydrolase family protein;protein_id=WJH07890.1;transl_table=11 CP118128.1 Genbank pseudogene 3508161 3509119 . - . ID=gene-PUW31_17070;Name=PUW31_17070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_17070;pseudo=true CP118128.1 Protein Homology CDS 3508161 3509119 . - 0 ID=cds-PUW31_17070;Parent=gene-PUW31_17070;Note=frameshifted;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462947.1;locus_tag=PUW31_17070;product=aminoimidazole riboside kinase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3509130 3510464 . - . ID=gene-PUW31_17075;Name=PUW31_17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17075 CP118128.1 Protein Homology CDS 3509130 3510464 . - 0 ID=cds-WJH07891.1;Parent=gene-PUW31_17075;Dbxref=NCBI_GP:WJH07891.1;Name=WJH07891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462946.1;locus_tag=PUW31_17075;product=MFS transporter;protein_id=WJH07891.1;transl_table=11 CP118128.1 Genbank gene 3510727 3511482 . - . ID=gene-PUW31_17080;Name=PUW31_17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17080 CP118128.1 Protein Homology CDS 3510727 3511482 . - 0 ID=cds-WJH07892.1;Parent=gene-PUW31_17080;Dbxref=NCBI_GP:WJH07892.1;Name=WJH07892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=PUW31_17080;product=CDP-diacylglycerol diphosphatase;protein_id=WJH07892.1;transl_table=11 CP118128.1 Genbank gene 3511583 3512572 . - . ID=gene-PUW31_17085;Name=PUW31_17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17085 CP118128.1 Protein Homology CDS 3511583 3512572 . - 0 ID=cds-WJH07893.1;Parent=gene-PUW31_17085;Dbxref=NCBI_GP:WJH07893.1;Name=WJH07893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=PUW31_17085;product=sulfate ABC transporter substrate-binding protein;protein_id=WJH07893.1;transl_table=11 CP118128.1 Genbank gene 3512776 3513738 . - . ID=gene-PUW31_17090;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=PUW31_17090 CP118128.1 Protein Homology CDS 3512776 3513738 . - 0 ID=cds-WJH07894.1;Parent=gene-PUW31_17090;Dbxref=NCBI_GP:WJH07894.1;Name=WJH07894.1;Ontology_term=GO:0006096;gbkey=CDS;gene=pfkA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=PUW31_17090;product=6-phosphofructokinase;protein_id=WJH07894.1;transl_table=11 CP118128.1 Genbank gene 3513923 3514825 . - . ID=gene-PUW31_17095;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=PUW31_17095 CP118128.1 Protein Homology CDS 3513923 3514825 . - 0 ID=cds-WJH07895.1;Parent=gene-PUW31_17095;Dbxref=NCBI_GP:WJH07895.1;Name=WJH07895.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462942.1;locus_tag=PUW31_17095;product=CDF family cation-efflux transporter FieF;protein_id=WJH07895.1;transl_table=11 CP118128.1 Genbank gene 3514972 3515472 . - . ID=gene-PUW31_17100;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=PUW31_17100 CP118128.1 Protein Homology CDS 3514972 3515472 . - 0 ID=cds-WJH07896.1;Parent=gene-PUW31_17100;Dbxref=NCBI_GP:WJH07896.1;Name=WJH07896.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462941.1;locus_tag=PUW31_17100;product=cell-envelope stress modulator CpxP;protein_id=WJH07896.1;transl_table=11 CP118128.1 Genbank gene 3515623 3516321 . + . ID=gene-PUW31_17105;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=PUW31_17105 CP118128.1 Protein Homology CDS 3515623 3516321 . + 0 ID=cds-WJH07897.1;Parent=gene-PUW31_17105;Dbxref=NCBI_GP:WJH07897.1;Name=WJH07897.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=PUW31_17105;product=envelope stress response regulator transcription factor CpxR;protein_id=WJH07897.1;transl_table=11 CP118128.1 Genbank gene 3516318 3517691 . + . ID=gene-PUW31_17110;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=PUW31_17110 CP118128.1 Protein Homology CDS 3516318 3517691 . + 0 ID=cds-WJH07898.1;Parent=gene-PUW31_17110;Dbxref=NCBI_GP:WJH07898.1;Name=WJH07898.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462939.1;locus_tag=PUW31_17110;product=envelope stress sensor histidine kinase CpxA;protein_id=WJH07898.1;transl_table=11 CP118128.1 Genbank gene 3517739 3517942 . - . ID=gene-PUW31_17115;Name=PUW31_17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17115 CP118128.1 Protein Homology CDS 3517739 3517942 . - 0 ID=cds-WJH07899.1;Parent=gene-PUW31_17115;Dbxref=NCBI_GP:WJH07899.1;Name=WJH07899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000338671.1;locus_tag=PUW31_17115;product=hypothetical protein;protein_id=WJH07899.1;transl_table=11 CP118128.1 Genbank gene 3518063 3518458 . - . ID=gene-PUW31_17120;Name=PUW31_17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17120 CP118128.1 Protein Homology CDS 3518063 3518458 . - 0 ID=cds-WJH07900.1;Parent=gene-PUW31_17120;Dbxref=NCBI_GP:WJH07900.1;Name=WJH07900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462938.1;locus_tag=PUW31_17120;product=nuclear transport factor 2 family protein;protein_id=WJH07900.1;transl_table=11 CP118128.1 Genbank pseudogene 3518470 3519159 . - . ID=gene-PUW31_17125;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=pseudogene;locus_tag=PUW31_17125;pseudo=true CP118128.1 Protein Homology CDS 3518470 3519159 . - 0 ID=cds-PUW31_17125;Parent=gene-PUW31_17125;Note=internal stop;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559227.1;locus_tag=PUW31_17125;product=6-hydroxyaminopurine reductase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 3519229 3519847 . - . ID=gene-PUW31_17130;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=pseudogene;locus_tag=PUW31_17130;pseudo=true CP118128.1 Protein Homology CDS 3519229 3519847 . - 0 ID=cds-PUW31_17130;Parent=gene-PUW31_17130;Note=frameshifted;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=PUW31_17130;product=superoxide dismutase [Mn];pseudo=true;transl_table=11 CP118128.1 Genbank gene 3520176 3521159 . + . ID=gene-PUW31_17135;Name=PUW31_17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17135 CP118128.1 Protein Homology CDS 3520176 3521159 . + 0 ID=cds-WJH07901.1;Parent=gene-PUW31_17135;Dbxref=NCBI_GP:WJH07901.1;Name=WJH07901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462935.1;locus_tag=PUW31_17135;product=TRAP transporter substrate-binding protein;protein_id=WJH07901.1;transl_table=11 CP118128.1 Genbank gene 3521178 3521693 . + . ID=gene-PUW31_17140;Name=PUW31_17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17140 CP118128.1 Protein Homology CDS 3521178 3521693 . + 0 ID=cds-WJH07902.1;Parent=gene-PUW31_17140;Dbxref=NCBI_GP:WJH07902.1;Name=WJH07902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462934.1;locus_tag=PUW31_17140;product=TRAP transporter small permease;protein_id=WJH07902.1;transl_table=11 CP118128.1 Genbank gene 3521686 3522993 . + . ID=gene-PUW31_17145;Name=PUW31_17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17145 CP118128.1 Protein Homology CDS 3521686 3522993 . + 0 ID=cds-WJH07903.1;Parent=gene-PUW31_17145;Dbxref=NCBI_GP:WJH07903.1;Name=WJH07903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462933.1;locus_tag=PUW31_17145;product=TRAP transporter large permease;protein_id=WJH07903.1;transl_table=11 CP118128.1 Genbank gene 3523151 3523834 . - . ID=gene-PUW31_17150;Name=PUW31_17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17150 CP118128.1 Protein Homology CDS 3523151 3523834 . - 0 ID=cds-WJH07904.1;Parent=gene-PUW31_17150;Dbxref=NCBI_GP:WJH07904.1;Name=WJH07904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462932.3;locus_tag=PUW31_17150;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WJH07904.1;transl_table=11 CP118128.1 Genbank gene 3524453 3525487 . + . ID=gene-PUW31_17155;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=PUW31_17155 CP118128.1 Protein Homology CDS 3524453 3525487 . + 0 ID=cds-WJH07905.1;Parent=gene-PUW31_17155;Dbxref=NCBI_GP:WJH07905.1;Name=WJH07905.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462931.1;locus_tag=PUW31_17155;product=L-rhamnose/proton symporter RhaT;protein_id=WJH07905.1;transl_table=11 CP118128.1 Genbank pseudogene 3525484 3526331 . - . ID=gene-PUW31_17160;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=pseudogene;locus_tag=PUW31_17160;pseudo=true CP118128.1 Protein Homology CDS 3525484 3526331 . - 0 ID=cds-PUW31_17160;Parent=gene-PUW31_17160;Note=frameshifted;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462930.1;locus_tag=PUW31_17160;product=HTH-type transcriptional activator RhaR;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3526484 3527320 . - . ID=gene-PUW31_17165;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=PUW31_17165 CP118128.1 Protein Homology CDS 3526484 3527320 . - 0 ID=cds-WJH07906.1;Parent=gene-PUW31_17165;Dbxref=NCBI_GP:WJH07906.1;Name=WJH07906.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462929.1;locus_tag=PUW31_17165;product=HTH-type transcriptional activator RhaS;protein_id=WJH07906.1;transl_table=11 CP118128.1 Genbank gene 3527608 3529077 . + . ID=gene-PUW31_17170;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=PUW31_17170 CP118128.1 Protein Homology CDS 3527608 3529077 . + 0 ID=cds-WJH07907.1;Parent=gene-PUW31_17170;Dbxref=NCBI_GP:WJH07907.1;Name=WJH07907.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462928.1;locus_tag=PUW31_17170;product=rhamnulokinase;protein_id=WJH07907.1;transl_table=11 CP118128.1 Genbank gene 3529074 3530333 . + . ID=gene-PUW31_17175;Name=PUW31_17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17175 CP118128.1 Protein Homology CDS 3529074 3530333 . + 0 ID=cds-WJH07908.1;Parent=gene-PUW31_17175;Dbxref=NCBI_GP:WJH07908.1;Name=WJH07908.1;Ontology_term=GO:0019299,GO:0008740,GO:0030145;gbkey=CDS;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462927.1;locus_tag=PUW31_17175;product=L-rhamnose isomerase;protein_id=WJH07908.1;transl_table=11 CP118128.1 Genbank gene 3530476 3531303 . + . ID=gene-PUW31_17180;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=PUW31_17180 CP118128.1 Protein Homology CDS 3530476 3531303 . + 0 ID=cds-WJH07909.1;Parent=gene-PUW31_17180;Dbxref=NCBI_GP:WJH07909.1;Name=WJH07909.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462926.1;locus_tag=PUW31_17180;product=rhamnulose-1-phosphate aldolase;protein_id=WJH07909.1;transl_table=11 CP118128.1 Genbank pseudogene 3531490 3532577 . + . ID=gene-PUW31_17185;Name=PUW31_17185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_17185;pseudo=true CP118128.1 Protein Homology CDS 3531490 3532577 . + 0 ID=cds-PUW31_17185;Parent=gene-PUW31_17185;Note=frameshifted;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF012678.2;locus_tag=PUW31_17185;product=iron-containing alcohol dehydrogenase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3532574 3532888 . + . ID=gene-PUW31_17190;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=PUW31_17190 CP118128.1 Protein Homology CDS 3532574 3532888 . + 0 ID=cds-WJH07910.1;Parent=gene-PUW31_17190;Dbxref=NCBI_GP:WJH07910.1;Name=WJH07910.1;Ontology_term=GO:0019301,GO:0016857;gbkey=CDS;gene=rhaM;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462924.1;locus_tag=PUW31_17190;product=L-rhamnose mutarotase;protein_id=WJH07910.1;transl_table=11 CP118128.1 Genbank gene 3532977 3533525 . - . ID=gene-PUW31_17195;Name=PUW31_17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17195 CP118128.1 Protein Homology CDS 3532977 3533525 . - 0 ID=cds-WJH07911.1;Parent=gene-PUW31_17195;Dbxref=NCBI_GP:WJH07911.1;Name=WJH07911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855902.1;locus_tag=PUW31_17195;product=helix-turn-helix domain-containing protein;protein_id=WJH07911.1;transl_table=11 CP118128.1 Genbank gene 3533626 3534285 . + . ID=gene-PUW31_17200;Name=PUW31_17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17200 CP118128.1 Protein Homology CDS 3533626 3534285 . + 0 ID=cds-WJH07912.1;Parent=gene-PUW31_17200;Dbxref=NCBI_GP:WJH07912.1;Name=WJH07912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462922.1;locus_tag=PUW31_17200;product=AzlC family ABC transporter permease;protein_id=WJH07912.1;transl_table=11 CP118128.1 Genbank gene 3534285 3534608 . + . ID=gene-PUW31_17205;Name=PUW31_17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17205 CP118128.1 Protein Homology CDS 3534285 3534608 . + 0 ID=cds-WJH07913.1;Parent=gene-PUW31_17205;Dbxref=NCBI_GP:WJH07913.1;Name=WJH07913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462921.1;locus_tag=PUW31_17205;product=AzlD domain-containing protein;protein_id=WJH07913.1;transl_table=11 CP118128.1 Genbank gene 3534964 3536031 . - . ID=gene-PUW31_17210;Name=PUW31_17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17210 CP118128.1 Protein Homology CDS 3534964 3536031 . - 0 ID=cds-WJH07914.1;Parent=gene-PUW31_17210;Dbxref=NCBI_GP:WJH07914.1;Name=WJH07914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828052.1;locus_tag=PUW31_17210;product=DUF3829 domain-containing protein;protein_id=WJH07914.1;transl_table=11 CP118128.1 Genbank pseudogene 3536213 3537233 . + . ID=gene-PUW31_17215;Name=PUW31_17215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_17215;pseudo=true CP118128.1 Protein Homology CDS 3536213 3537233 . + 0 ID=cds-PUW31_17215;Parent=gene-PUW31_17215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462919.1;locus_tag=PUW31_17215;product=YiiG family protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3537501 3538337 . - . ID=gene-PUW31_17220;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=PUW31_17220 CP118128.1 Protein Homology CDS 3537501 3538337 . - 0 ID=cds-WJH07915.1;Parent=gene-PUW31_17220;Dbxref=NCBI_GP:WJH07915.1;Name=WJH07915.1;Ontology_term=GO:0009061,GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462918.1;locus_tag=PUW31_17220;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WJH07915.1;transl_table=11 CP118128.1 Genbank gene 3538532 3541582 . + . ID=gene-PUW31_17225;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=PUW31_17225 CP118128.1 Protein Homology CDS 3538532 3541582 . + 0 ID=cds-WJH07916.1;Parent=gene-PUW31_17225;Dbxref=NCBI_GP:WJH07916.1;Name=WJH07916.1;Ontology_term=GO:0015942,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=PUW31_17225;product=formate dehydrogenase-N subunit alpha;protein_id=WJH07916.1;transl_except=(pos:3539117..3539119%2Caa:Sec);transl_table=11 CP118128.1 Genbank gene 3541595 3542497 . + . ID=gene-PUW31_17230;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=PUW31_17230 CP118128.1 Protein Homology CDS 3541595 3542497 . + 0 ID=cds-WJH07917.1;Parent=gene-PUW31_17230;Dbxref=NCBI_GP:WJH07917.1;Name=WJH07917.1;Ontology_term=GO:0045333,GO:0008863;gbkey=CDS;gene=fdxH;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=cellular respiration|0045333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462916.1;locus_tag=PUW31_17230;product=formate dehydrogenase subunit beta;protein_id=WJH07917.1;transl_table=11 CP118128.1 Genbank gene 3542494 3543129 . + . ID=gene-PUW31_17235;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=PUW31_17235 CP118128.1 Protein Homology CDS 3542494 3543129 . + 0 ID=cds-WJH07918.1;Parent=gene-PUW31_17235;Dbxref=NCBI_GP:WJH07918.1;Name=WJH07918.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462915.1;locus_tag=PUW31_17235;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WJH07918.1;transl_table=11 CP118128.1 Genbank gene 3543126 3544055 . + . ID=gene-PUW31_17240;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=PUW31_17240 CP118128.1 Protein Homology CDS 3543126 3544055 . + 0 ID=cds-WJH07919.1;Parent=gene-PUW31_17240;Dbxref=NCBI_GP:WJH07919.1;Name=WJH07919.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=PUW31_17240;product=formate dehydrogenase accessory protein FdhE;protein_id=WJH07919.1;transl_table=11 CP118128.1 Genbank gene 3544102 3544392 . - . ID=gene-PUW31_17245;Name=PUW31_17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17245 CP118128.1 Protein Homology CDS 3544102 3544392 . - 0 ID=cds-WJH07920.1;Parent=gene-PUW31_17245;Dbxref=NCBI_GP:WJH07920.1;Name=WJH07920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264433.1;locus_tag=PUW31_17245;product=DNA-binding transcriptional regulator;protein_id=WJH07920.1;transl_table=11 CP118128.1 Genbank gene 3544393 3544704 . - . ID=gene-PUW31_17250;Name=PUW31_17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17250 CP118128.1 Protein Homology CDS 3544393 3544704 . - 0 ID=cds-WJH07921.1;Parent=gene-PUW31_17250;Dbxref=NCBI_GP:WJH07921.1;Name=WJH07921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001159636.1;locus_tag=PUW31_17250;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WJH07921.1;transl_table=11 CP118128.1 Genbank gene 3544922 3545851 . + . ID=gene-PUW31_17255;Name=PUW31_17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17255 CP118128.1 Protein Homology CDS 3544922 3545851 . + 0 ID=cds-WJH07922.1;Parent=gene-PUW31_17255;Dbxref=NCBI_GP:WJH07922.1;Name=WJH07922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462912.1;locus_tag=PUW31_17255;product=alpha/beta hydrolase;protein_id=WJH07922.1;transl_table=11 CP118128.1 Genbank gene 3545937 3546248 . + . ID=gene-PUW31_17260;Name=PUW31_17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17260 CP118128.1 Protein Homology CDS 3545937 3546248 . + 0 ID=cds-WJH07923.1;Parent=gene-PUW31_17260;Dbxref=NCBI_GP:WJH07923.1;Name=WJH07923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462911.1;locus_tag=PUW31_17260;product=type II toxin-antitoxin system HigB family toxin;protein_id=WJH07923.1;transl_table=11 CP118128.1 Genbank gene 3546245 3546691 . + . ID=gene-PUW31_17265;Name=PUW31_17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17265 CP118128.1 Protein Homology CDS 3546245 3546691 . + 0 ID=cds-WJH07924.1;Parent=gene-PUW31_17265;Dbxref=NCBI_GP:WJH07924.1;Name=WJH07924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462910.3;locus_tag=PUW31_17265;product=type II toxin-antitoxin system HigA family antitoxin;protein_id=WJH07924.1;transl_table=11 CP118128.1 Genbank gene 3546706 3547647 . - . ID=gene-PUW31_17270;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=PUW31_17270 CP118128.1 Protein Homology CDS 3546706 3547647 . - 0 ID=cds-WJH07925.1;Parent=gene-PUW31_17270;Dbxref=NCBI_GP:WJH07925.1;Name=WJH07925.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=PUW31_17270;product=fatty acid biosynthesis protein FabY;protein_id=WJH07925.1;transl_table=11 CP118128.1 Genbank gene 3547692 3548129 . - . ID=gene-PUW31_17275;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=PUW31_17275 CP118128.1 Protein Homology CDS 3547692 3548129 . - 0 ID=cds-WJH07926.1;Parent=gene-PUW31_17275;Dbxref=NCBI_GP:WJH07926.1;Name=WJH07926.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=PUW31_17275;product=D-aminoacyl-tRNA deacylase;protein_id=WJH07926.1;transl_table=11 CP118128.1 Genbank pseudogene 3548126 3548984 . - . ID=gene-PUW31_17280;Name=PUW31_17280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_17280;pseudo=true CP118128.1 Protein Homology CDS 3548126 3548984 . - 0 ID=cds-PUW31_17280;Parent=gene-PUW31_17280;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462907.1;locus_tag=PUW31_17280;product=virulence factor BrkB family protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3548978 3549577 . - . ID=gene-PUW31_17285;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=PUW31_17285 CP118128.1 Protein Homology CDS 3548978 3549577 . - 0 ID=cds-WJH07927.1;Parent=gene-PUW31_17285;Dbxref=NCBI_GP:WJH07927.1;Name=WJH07927.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462906.1;locus_tag=PUW31_17285;product=glucose-1-phosphatase;protein_id=WJH07927.1;transl_table=11 CP118128.1 Genbank gene 3549768 3550571 . - . ID=gene-PUW31_17290;Name=PUW31_17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17290 CP118128.1 Protein Homology CDS 3549768 3550571 . - 0 ID=cds-WJH07928.1;Parent=gene-PUW31_17290;Dbxref=NCBI_GP:WJH07928.1;Name=WJH07928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462905.1;locus_tag=PUW31_17290;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WJH07928.1;transl_table=11 CP118128.1 Genbank pseudogene 3550605 3551501 . - . ID=gene-PUW31_17295;Name=PUW31_17295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_17295;pseudo=true CP118128.1 Protein Homology CDS 3550605 3551501 . - 0 ID=cds-PUW31_17295;Parent=gene-PUW31_17295;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462904.3;locus_tag=PUW31_17295;product=sugar kinase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3551666 3552562 . + . ID=gene-PUW31_17300;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=PUW31_17300 CP118128.1 Protein Homology CDS 3551666 3552562 . + 0 ID=cds-WJH07929.1;Parent=gene-PUW31_17300;Dbxref=NCBI_GP:WJH07929.1;Name=WJH07929.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462903.1;locus_tag=PUW31_17300;product=sulfolactaldehyde 3-reductase;protein_id=WJH07929.1;transl_table=11 CP118128.1 Genbank gene 3552585 3553463 . + . ID=gene-PUW31_17305;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=PUW31_17305 CP118128.1 Protein Homology CDS 3552585 3553463 . + 0 ID=cds-WJH07930.1;Parent=gene-PUW31_17305;Dbxref=NCBI_GP:WJH07930.1;Name=WJH07930.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462902.1;locus_tag=PUW31_17305;product=sulfofructosephosphate aldolase;protein_id=WJH07930.1;transl_table=11 CP118128.1 Genbank gene 3553479 3554720 . + . ID=gene-PUW31_17310;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=PUW31_17310 CP118128.1 Protein Homology CDS 3553479 3554720 . + 0 ID=cds-WJH07931.1;Parent=gene-PUW31_17310;Dbxref=NCBI_GP:WJH07931.1;Name=WJH07931.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462901.1;locus_tag=PUW31_17310;product=sulfoquinovose isomerase;protein_id=WJH07931.1;transl_table=11 CP118128.1 Genbank gene 3554724 3555581 . + . ID=gene-PUW31_17315;Name=PUW31_17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17315 CP118128.1 Protein Homology CDS 3554724 3555581 . + 0 ID=cds-WJH07932.1;Parent=gene-PUW31_17315;Dbxref=NCBI_GP:WJH07932.1;Name=WJH07932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462900.3;locus_tag=PUW31_17315;product=aldose-1-epimerase;protein_id=WJH07932.1;transl_table=11 CP118128.1 Genbank gene 3555625 3557661 . + . ID=gene-PUW31_17320;Name=PUW31_17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17320 CP118128.1 Protein Homology CDS 3555625 3557661 . + 0 ID=cds-WJH07933.1;Parent=gene-PUW31_17320;Dbxref=NCBI_GP:WJH07933.1;Name=WJH07933.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462899.1;locus_tag=PUW31_17320;product=alpha-glucosidase;protein_id=WJH07933.1;transl_table=11 CP118128.1 Genbank gene 3557707 3559089 . + . ID=gene-PUW31_17325;Name=PUW31_17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17325 CP118128.1 Protein Homology CDS 3557707 3559089 . + 0 ID=cds-WJH07934.1;Parent=gene-PUW31_17325;Dbxref=NCBI_GP:WJH07934.1;Name=WJH07934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462898.1;locus_tag=PUW31_17325;product=MFS transporter;protein_id=WJH07934.1;transl_table=11 CP118128.1 Genbank gene 3559135 3560556 . + . ID=gene-PUW31_17330;Name=PUW31_17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17330 CP118128.1 Protein Homology CDS 3559135 3560556 . + 0 ID=cds-WJH07935.1;Parent=gene-PUW31_17330;Dbxref=NCBI_GP:WJH07935.1;Name=WJH07935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462897.1;locus_tag=PUW31_17330;product=MFS transporter;protein_id=WJH07935.1;transl_table=11 CP118128.1 Genbank gene 3560624 3561316 . + . ID=gene-PUW31_17335;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=PUW31_17335 CP118128.1 Protein Homology CDS 3560624 3561316 . + 0 ID=cds-WJH07936.1;Parent=gene-PUW31_17335;Dbxref=NCBI_GP:WJH07936.1;Name=WJH07936.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462896.1;locus_tag=PUW31_17335;product=porin OmpL;protein_id=WJH07936.1;transl_table=11 CP118128.1 Genbank gene 3561473 3562321 . + . ID=gene-PUW31_17340;Name=PUW31_17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17340 CP118128.1 Protein Homology CDS 3561473 3562321 . + 0 ID=cds-WJH07937.1;Parent=gene-PUW31_17340;Dbxref=NCBI_GP:WJH07937.1;Name=WJH07937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462895.1;locus_tag=PUW31_17340;product=STM4015 family protein;protein_id=WJH07937.1;transl_table=11 CP118128.1 Genbank gene 3562334 3563359 . + . ID=gene-PUW31_17345;Name=PUW31_17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17345 CP118128.1 Protein Homology CDS 3562334 3563359 . + 0 ID=cds-WJH07938.1;Parent=gene-PUW31_17345;Dbxref=NCBI_GP:WJH07938.1;Name=WJH07938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462894.3;locus_tag=PUW31_17345;product=STM4014 family protein;protein_id=WJH07938.1;transl_table=11 CP118128.1 Genbank gene 3563352 3564227 . + . ID=gene-PUW31_17350;Name=PUW31_17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17350 CP118128.1 Protein Homology CDS 3563352 3564227 . + 0 ID=cds-WJH07939.1;Parent=gene-PUW31_17350;Dbxref=NCBI_GP:WJH07939.1;Name=WJH07939.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462893.3;locus_tag=PUW31_17350;product=STM4013/SEN3800 family hydrolase;protein_id=WJH07939.1;transl_table=11 CP118128.1 Genbank gene 3564229 3565470 . + . ID=gene-PUW31_17355;Name=PUW31_17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17355 CP118128.1 Protein Homology CDS 3564229 3565470 . + 0 ID=cds-WJH07940.1;Parent=gene-PUW31_17355;Dbxref=NCBI_GP:WJH07940.1;Name=WJH07940.1;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462892.1;locus_tag=PUW31_17355;product=STM4012 family radical SAM protein;protein_id=WJH07940.1;transl_table=11 CP118128.1 Genbank gene 3565467 3566345 . + . ID=gene-PUW31_17360;Name=PUW31_17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17360 CP118128.1 Protein Homology CDS 3565467 3566345 . + 0 ID=cds-WJH07941.1;Parent=gene-PUW31_17360;Dbxref=NCBI_GP:WJH07941.1;Name=WJH07941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462891.1;locus_tag=PUW31_17360;product=STM4011 family radical SAM protein;protein_id=WJH07941.1;transl_table=11 CP118128.1 Genbank gene 3566330 3567064 . + . ID=gene-PUW31_17365;Name=PUW31_17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17365 CP118128.1 Protein Homology CDS 3566330 3567064 . + 0 ID=cds-WJH07942.1;Parent=gene-PUW31_17365;Dbxref=NCBI_GP:WJH07942.1;Name=WJH07942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462890.1;locus_tag=PUW31_17365;product=Cof-type HAD-IIB family hydrolase;protein_id=WJH07942.1;transl_table=11 CP118128.1 Genbank pseudogene 3567119 3568940 . - . ID=gene-PUW31_17370;Name=typA;gbkey=Gene;gene=typA;gene_biotype=pseudogene;locus_tag=PUW31_17370;pseudo=true CP118128.1 Protein Homology CDS 3567119 3568940 . - 0 ID=cds-PUW31_17370;Parent=gene-PUW31_17370;Note=frameshifted;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462889.1;locus_tag=PUW31_17370;product=ribosome-dependent GTPase TypA;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3569316 3570725 . + . ID=gene-PUW31_17375;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=PUW31_17375 CP118128.1 Protein Homology CDS 3569316 3570725 . + 0 ID=cds-WJH07943.1;Parent=gene-PUW31_17375;Dbxref=NCBI_GP:WJH07943.1;Name=WJH07943.1;Ontology_term=GO:0006542,GO:0006807,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamate-ammonia ligase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=PUW31_17375;product=glutamate--ammonia ligase;protein_id=WJH07943.1;transl_table=11 CP118128.1 Genbank gene 3571000 3572049 . + . ID=gene-PUW31_17380;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=PUW31_17380 CP118128.1 Protein Homology CDS 3571000 3572049 . + 0 ID=cds-WJH07944.1;Parent=gene-PUW31_17380;Dbxref=NCBI_GP:WJH07944.1;Name=WJH07944.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462886.1;locus_tag=PUW31_17380;product=nitrogen regulation protein NR(II);protein_id=WJH07944.1;transl_table=11 CP118128.1 Genbank gene 3572058 3573467 . + . ID=gene-PUW31_17385;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=PUW31_17385 CP118128.1 Protein Homology CDS 3572058 3573467 . + 0 ID=cds-WJH07945.1;Parent=gene-PUW31_17385;Dbxref=NCBI_GP:WJH07945.1;Name=WJH07945.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=PUW31_17385;product=nitrogen regulation protein NR(I);protein_id=WJH07945.1;transl_table=11 CP118128.1 Genbank gene 3573580 3573690 . + . ID=gene-PUW31_17390;Name=PUW31_17390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17390 CP118128.1 Protein Homology CDS 3573580 3573690 . + 0 ID=cds-WJH07946.1;Parent=gene-PUW31_17390;Dbxref=NCBI_GP:WJH07946.1;Name=WJH07946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=PUW31_17390;product=YshB family small membrane protein;protein_id=WJH07946.1;transl_table=11 CP118128.1 Genbank gene 3573780 3575153 . - . ID=gene-PUW31_17395;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=PUW31_17395 CP118128.1 Protein Homology CDS 3573780 3575153 . - 0 ID=cds-WJH10771.1;Parent=gene-PUW31_17395;Dbxref=NCBI_GP:WJH10771.1;Name=WJH10771.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemN;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462884.1;locus_tag=PUW31_17395;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WJH10771.1;transl_table=11 CP118128.1 Genbank pseudogene 3575342 3575833 . - . ID=gene-PUW31_17400;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=pseudogene;locus_tag=PUW31_17400;pseudo=true CP118128.1 Protein Homology CDS 3575342 3575833 . - 0 ID=cds-PUW31_17400;Parent=gene-PUW31_17400;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121849.1;locus_tag=PUW31_17400;product=Der GTPase-activating protein YihI;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3575957 3576181 . - . ID=gene-PUW31_17405;Name=PUW31_17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17405 CP118128.1 Protein Homology CDS 3575957 3576181 . - 0 ID=cds-WJH07947.1;Parent=gene-PUW31_17405;Dbxref=NCBI_GP:WJH07947.1;Name=WJH07947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462882.1;locus_tag=PUW31_17405;product=hypothetical protein;protein_id=WJH07947.1;transl_table=11 CP118128.1 Genbank gene 3576421 3577053 . + . ID=gene-PUW31_17410;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=PUW31_17410 CP118128.1 Protein Homology CDS 3576421 3577053 . + 0 ID=cds-WJH07948.1;Parent=gene-PUW31_17410;Dbxref=NCBI_GP:WJH07948.1;Name=WJH07948.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462881.1;locus_tag=PUW31_17410;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WJH07948.1;transl_table=11 CP118128.1 Genbank pseudogene 3577388 3580172 . - . ID=gene-PUW31_17415;Name=polA;gbkey=Gene;gene=polA;gene_biotype=pseudogene;locus_tag=PUW31_17415;pseudo=true CP118128.1 Protein Homology CDS 3577388 3580172 . - 0 ID=cds-PUW31_17415;Parent=gene-PUW31_17415;Note=frameshifted;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462879.1;locus_tag=PUW31_17415;product=DNA polymerase I;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3580560 3581468 . + . ID=gene-PUW31_17420;Name=PUW31_17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17420 CP118128.1 Protein Homology CDS 3580560 3581468 . + 0 ID=cds-WJH07949.1;Parent=gene-PUW31_17420;Dbxref=NCBI_GP:WJH07949.1;Name=WJH07949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462878.1;locus_tag=PUW31_17420;product=acyltransferase;protein_id=WJH07949.1;transl_table=11 CP118128.1 Genbank gene 3581481 3582104 . - . ID=gene-PUW31_17425;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=PUW31_17425 CP118128.1 Protein Homology CDS 3581481 3582104 . - 0 ID=cds-WJH07950.1;Parent=gene-PUW31_17425;Dbxref=NCBI_GP:WJH07950.1;Name=WJH07950.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462877.1;locus_tag=PUW31_17425;product=thiol:disulfide interchange protein DsbA;protein_id=WJH07950.1;transl_table=11 CP118128.1 Genbank gene 3582121 3583107 . - . ID=gene-PUW31_17430;Name=PUW31_17430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17430 CP118128.1 Protein Homology CDS 3582121 3583107 . - 0 ID=cds-WJH07951.1;Parent=gene-PUW31_17430;Dbxref=NCBI_GP:WJH07951.1;Name=WJH07951.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462876.1;locus_tag=PUW31_17430;product=serine/threonine protein kinase;protein_id=WJH07951.1;transl_table=11 CP118128.1 Genbank gene 3583184 3583453 . - . ID=gene-PUW31_17435;Name=PUW31_17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17435 CP118128.1 Protein Homology CDS 3583184 3583453 . - 0 ID=cds-WJH07952.1;Parent=gene-PUW31_17435;Dbxref=NCBI_GP:WJH07952.1;Name=WJH07952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=PUW31_17435;product=YihD family protein;protein_id=WJH07952.1;transl_table=11 CP118128.1 Genbank gene 3583523 3584107 . + . ID=gene-PUW31_17440;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=PUW31_17440 CP118128.1 Protein Homology CDS 3583523 3584107 . + 0 ID=cds-WJH07953.1;Parent=gene-PUW31_17440;Dbxref=NCBI_GP:WJH07953.1;Name=WJH07953.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462874.1;locus_tag=PUW31_17440;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WJH07953.1;transl_table=11 CP118128.1 Genbank gene 3584104 3584619 . + . ID=gene-PUW31_17445;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=PUW31_17445 CP118128.1 Protein Homology CDS 3584104 3584619 . + 0 ID=cds-WJH10772.1;Parent=gene-PUW31_17445;Dbxref=NCBI_GP:WJH10772.1;Name=WJH10772.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462873.1;locus_tag=PUW31_17445;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WJH10772.1;transl_table=11 CP118128.1 Genbank gene 3584891 3585006 . - . ID=gene-PUW31_17450;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW31_17450 CP118128.1 cmsearch rRNA 3584891 3585006 . - . ID=rna-PUW31_17450;Parent=gene-PUW31_17450;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_17450;product=5S ribosomal RNA CP118128.1 cmsearch exon 3584891 3585006 . - . ID=exon-PUW31_17450-1;Parent=rna-PUW31_17450;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_17450;product=5S ribosomal RNA CP118128.1 Genbank gene 3585203 3588191 . - . ID=gene-PUW31_17455;Name=PUW31_17455;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW31_17455 CP118128.1 cmsearch rRNA 3585203 3588191 . - . ID=rna-PUW31_17455;Parent=gene-PUW31_17455;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_17455;product=23S ribosomal RNA CP118128.1 cmsearch exon 3585203 3588191 . - . ID=exon-PUW31_17455-1;Parent=rna-PUW31_17455;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_17455;product=23S ribosomal RNA CP118128.1 Genbank gene 3588385 3588460 . - . ID=gene-PUW31_17460;Name=PUW31_17460;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_17460 CP118128.1 tRNAscan-SE tRNA 3588385 3588460 . - . ID=rna-PUW31_17460;Parent=gene-PUW31_17460;anticodon=(pos:complement(3588424..3588426));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_17460;product=tRNA-Glu CP118128.1 tRNAscan-SE exon 3588385 3588460 . - . ID=exon-PUW31_17460-1;Parent=rna-PUW31_17460;anticodon=(pos:complement(3588424..3588426));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_17460;product=tRNA-Glu CP118128.1 Genbank gene 3588546 3590087 . - . ID=gene-PUW31_17465;Name=PUW31_17465;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW31_17465 CP118128.1 cmsearch rRNA 3588546 3590087 . - . ID=rna-PUW31_17465;Parent=gene-PUW31_17465;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_17465;product=16S ribosomal RNA CP118128.1 cmsearch exon 3588546 3590087 . - . ID=exon-PUW31_17465-1;Parent=rna-PUW31_17465;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_17465;product=16S ribosomal RNA CP118128.1 Genbank gene 3590710 3592299 . + . ID=gene-PUW31_17470;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=PUW31_17470 CP118128.1 Protein Homology CDS 3590710 3592299 . + 0 ID=cds-WJH07954.1;Parent=gene-PUW31_17470;Dbxref=NCBI_GP:WJH07954.1;Name=WJH07954.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=PUW31_17470;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WJH07954.1;transl_table=11 CP118128.1 Genbank gene 3592311 3593600 . + . ID=gene-PUW31_17475;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=PUW31_17475 CP118128.1 Protein Homology CDS 3592311 3593600 . + 0 ID=cds-WJH07955.1;Parent=gene-PUW31_17475;Dbxref=NCBI_GP:WJH07955.1;Name=WJH07955.1;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463044.1;locus_tag=PUW31_17475;product=phosphoribosylamine--glycine ligase;protein_id=WJH07955.1;transl_table=11 CP118128.1 Genbank gene 3593597 3594922 . - . ID=gene-PUW31_17480;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=PUW31_17480 CP118128.1 Protein Homology CDS 3593597 3594922 . - 0 ID=cds-WJH07956.1;Parent=gene-PUW31_17480;Dbxref=NCBI_GP:WJH07956.1;Name=WJH07956.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463043.1;locus_tag=PUW31_17480;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WJH07956.1;transl_table=11 CP118128.1 Genbank gene 3594928 3596325 . - . ID=gene-PUW31_17485;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=PUW31_17485 CP118128.1 Protein Homology CDS 3594928 3596325 . - 0 ID=cds-WJH07957.1;Parent=gene-PUW31_17485;Dbxref=NCBI_GP:WJH07957.1;Name=WJH07957.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463042.1;locus_tag=PUW31_17485;product=two-component system sensor histidine kinase ZraS;protein_id=WJH07957.1;transl_table=11 CP118128.1 Genbank gene 3596579 3597034 . + . ID=gene-PUW31_17490;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=PUW31_17490 CP118128.1 Protein Homology CDS 3596579 3597034 . + 0 ID=cds-WJH07958.1;Parent=gene-PUW31_17490;Dbxref=NCBI_GP:WJH07958.1;Name=WJH07958.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463041.1;locus_tag=PUW31_17490;product=zinc resistance sensor/chaperone ZraP;protein_id=WJH07958.1;transl_table=11 CP118128.1 Genbank gene 3597076 3597768 . - . ID=gene-PUW31_17495;Name=PUW31_17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17495 CP118128.1 Protein Homology CDS 3597076 3597768 . - 0 ID=cds-WJH07959.1;Parent=gene-PUW31_17495;Dbxref=NCBI_GP:WJH07959.1;Name=WJH07959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463040.1;locus_tag=PUW31_17495;product=DUF1481 domain-containing protein;protein_id=WJH07959.1;transl_table=11 CP118128.1 Genbank gene 3597780 3598052 . - . ID=gene-PUW31_17500;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=PUW31_17500 CP118128.1 Protein Homology CDS 3597780 3598052 . - 0 ID=cds-WJH07960.1;Parent=gene-PUW31_17500;Dbxref=NCBI_GP:WJH07960.1;Name=WJH07960.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=PUW31_17500;product=DNA-binding protein HU-alpha;protein_id=WJH07960.1;transl_table=11 CP118128.1 Genbank gene 3598239 3598829 . - . ID=gene-PUW31_17505;Name=PUW31_17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17505 CP118128.1 Protein Homology CDS 3598239 3598829 . - 0 ID=cds-WJH07961.1;Parent=gene-PUW31_17505;Dbxref=NCBI_GP:WJH07961.1;Name=WJH07961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463038.1;locus_tag=PUW31_17505;product=YjaG family protein;protein_id=WJH07961.1;transl_table=11 CP118128.1 Genbank gene 3598871 3599542 . - . ID=gene-PUW31_17510;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=PUW31_17510 CP118128.1 Protein Homology CDS 3598871 3599542 . - 0 ID=cds-WJH07962.1;Parent=gene-PUW31_17510;Dbxref=NCBI_GP:WJH07962.1;Name=WJH07962.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463037.1;locus_tag=PUW31_17510;product=deoxyribonuclease V;protein_id=WJH07962.1;transl_table=11 CP118128.1 Genbank gene 3599552 3600616 . - . ID=gene-PUW31_17515;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=PUW31_17515 CP118128.1 Protein Homology CDS 3599552 3600616 . - 0 ID=cds-WJH07963.1;Parent=gene-PUW31_17515;Dbxref=NCBI_GP:WJH07963.1;Name=WJH07963.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463036.2;locus_tag=PUW31_17515;product=uroporphyrinogen decarboxylase;protein_id=WJH07963.1;transl_table=11 CP118128.1 Genbank gene 3600657 3601430 . - . ID=gene-PUW31_17520;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=PUW31_17520 CP118128.1 Protein Homology CDS 3600657 3601430 . - 0 ID=cds-WJH07964.1;Parent=gene-PUW31_17520;Dbxref=NCBI_GP:WJH07964.1;Name=WJH07964.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463035.1;locus_tag=PUW31_17520;product=NAD(+) diphosphatase;protein_id=WJH07964.1;transl_table=11 CP118128.1 Genbank gene 3601523 3602011 . + . ID=gene-PUW31_17525;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=PUW31_17525 CP118128.1 Protein Homology CDS 3601523 3602011 . + 0 ID=cds-WJH07965.1;Parent=gene-PUW31_17525;Dbxref=NCBI_GP:WJH07965.1;Name=WJH07965.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463034.1;locus_tag=PUW31_17525;product=sigma D regulator;protein_id=WJH07965.1;transl_table=11 CP118128.1 cmsearch riboswitch 3602126 3602289 . + . ID=id-CP118128.1:3602126..3602289;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch CP118128.1 Genbank gene 3602375 3604270 . + . ID=gene-PUW31_17530;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=PUW31_17530 CP118128.1 Protein Homology CDS 3602375 3604270 . + 0 ID=cds-WJH07966.1;Parent=gene-PUW31_17530;Dbxref=NCBI_GP:WJH07966.1;Name=WJH07966.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463033.1;locus_tag=PUW31_17530;product=phosphomethylpyrimidine synthase ThiC;protein_id=WJH07966.1;transl_table=11 CP118128.1 Genbank gene 3604270 3604905 . + . ID=gene-PUW31_17535;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=PUW31_17535 CP118128.1 Protein Homology CDS 3604270 3604905 . + 0 ID=cds-WJH07967.1;Parent=gene-PUW31_17535;Dbxref=NCBI_GP:WJH07967.1;Name=WJH07967.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463032.1;locus_tag=PUW31_17535;product=thiamine phosphate synthase;protein_id=WJH07967.1;transl_table=11 CP118128.1 Genbank gene 3604898 3605656 . + . ID=gene-PUW31_17540;Name=PUW31_17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17540 CP118128.1 Protein Homology CDS 3604898 3605656 . + 0 ID=cds-WJH07968.1;Parent=gene-PUW31_17540;Dbxref=NCBI_GP:WJH07968.1;Name=WJH07968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463031.1;locus_tag=PUW31_17540;product=HesA/MoeB/ThiF family protein;protein_id=WJH07968.1;transl_table=11 CP118128.1 Genbank gene 3605637 3605837 . + . ID=gene-PUW31_17545;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=PUW31_17545 CP118128.1 Protein Homology CDS 3605637 3605837 . + 0 ID=cds-WJH07969.1;Parent=gene-PUW31_17545;Dbxref=NCBI_GP:WJH07969.1;Name=WJH07969.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463030.1;locus_tag=PUW31_17545;product=sulfur carrier protein ThiS;protein_id=WJH07969.1;transl_table=11 CP118128.1 Genbank gene 3605839 3606609 . + . ID=gene-PUW31_17550;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=PUW31_17550 CP118128.1 Protein Homology CDS 3605839 3606609 . + 0 ID=cds-WJH07970.1;Parent=gene-PUW31_17550;Dbxref=NCBI_GP:WJH07970.1;Name=WJH07970.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463029.1;locus_tag=PUW31_17550;product=thiazole synthase;protein_id=WJH07970.1;transl_table=11 CP118128.1 Genbank gene 3606606 3607739 . + . ID=gene-PUW31_17555;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=PUW31_17555 CP118128.1 Protein Homology CDS 3606606 3607739 . + 0 ID=cds-WJH07971.1;Parent=gene-PUW31_17555;Dbxref=NCBI_GP:WJH07971.1;Name=WJH07971.1;Ontology_term=GO:0009228,GO:0016829,GO:1904047;gbkey=CDS;gene=thiH;go_function=lyase activity|0016829||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463028.1;locus_tag=PUW31_17555;product=2-iminoacetate synthase ThiH;protein_id=WJH07971.1;transl_table=11 CP118128.1 Genbank gene 3607890 3608078 . - . ID=gene-PUW31_17560;Name=PUW31_17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17560 CP118128.1 Protein Homology CDS 3607890 3608078 . - 0 ID=cds-WJH07972.1;Parent=gene-PUW31_17560;Dbxref=NCBI_GP:WJH07972.1;Name=WJH07972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463027.1;locus_tag=PUW31_17560;product=hypothetical protein;protein_id=WJH07972.1;transl_table=11 CP118128.1 Genbank pseudogene 3608401 3609382 . - . ID=gene-PUW31_17565;Name=PUW31_17565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_17565;pseudo=true CP118128.1 Protein Homology CDS 3608401 3609382 . - 0 ID=cds-PUW31_17565;Parent=gene-PUW31_17565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400600.1;locus_tag=PUW31_17565;product=type III secretion system effector arginine glycosyltransferase SseK1;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3609763 3610107 . + . ID=gene-PUW31_17570;Name=PUW31_17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17570 CP118128.1 Protein Homology CDS 3609763 3610107 . + 0 ID=cds-WJH07973.1;Parent=gene-PUW31_17570;Dbxref=NCBI_GP:WJH07973.1;Name=WJH07973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463025.1;locus_tag=PUW31_17570;product=cytoplasmic protein;protein_id=WJH07973.1;transl_table=11 CP118128.1 Genbank gene 3610113 3610436 . - . ID=gene-PUW31_17575;Name=PUW31_17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17575 CP118128.1 Protein Homology CDS 3610113 3610436 . - 0 ID=cds-WJH07974.1;Parent=gene-PUW31_17575;Dbxref=NCBI_GP:WJH07974.1;Name=WJH07974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463024.1;locus_tag=PUW31_17575;product=hypothetical protein;protein_id=WJH07974.1;transl_table=11 CP118128.1 Genbank gene 3610478 3614701 . - . ID=gene-PUW31_17580;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=PUW31_17580 CP118128.1 Protein Homology CDS 3610478 3614701 . - 0 ID=cds-WJH07975.1;Parent=gene-PUW31_17580;Dbxref=NCBI_GP:WJH07975.1;Name=WJH07975.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463023.1;locus_tag=PUW31_17580;product=DNA-directed RNA polymerase subunit beta';protein_id=WJH07975.1;transl_table=11 CP118128.1 Genbank gene 3614778 3618806 . - . ID=gene-PUW31_17585;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=PUW31_17585 CP118128.1 Protein Homology CDS 3614778 3618806 . - 0 ID=cds-WJH07976.1;Parent=gene-PUW31_17585;Dbxref=NCBI_GP:WJH07976.1;Name=WJH07976.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=PUW31_17585;product=DNA-directed RNA polymerase subunit beta;protein_id=WJH07976.1;transl_table=11 CP118128.1 Genbank gene 3619124 3619489 . - . ID=gene-PUW31_17590;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=PUW31_17590 CP118128.1 Protein Homology CDS 3619124 3619489 . - 0 ID=cds-WJH07977.1;Parent=gene-PUW31_17590;Dbxref=NCBI_GP:WJH07977.1;Name=WJH07977.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=PUW31_17590;product=50S ribosomal protein L7/L12;protein_id=WJH07977.1;transl_table=11 CP118128.1 Genbank gene 3619556 3620053 . - . ID=gene-PUW31_17595;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=PUW31_17595 CP118128.1 Protein Homology CDS 3619556 3620053 . - 0 ID=cds-WJH07978.1;Parent=gene-PUW31_17595;Dbxref=NCBI_GP:WJH07978.1;Name=WJH07978.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=PUW31_17595;product=50S ribosomal protein L10;protein_id=WJH07978.1;transl_table=11 CP118128.1 Genbank gene 3620469 3621173 . - . ID=gene-PUW31_17600;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=PUW31_17600 CP118128.1 Protein Homology CDS 3620469 3621173 . - 0 ID=cds-WJH07979.1;Parent=gene-PUW31_17600;Dbxref=NCBI_GP:WJH07979.1;Name=WJH07979.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463019.1;locus_tag=PUW31_17600;product=50S ribosomal protein L1;protein_id=WJH07979.1;transl_table=11 CP118128.1 Genbank pseudogene 3621177 3621604 . - . ID=gene-PUW31_17605;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=pseudogene;locus_tag=PUW31_17605;pseudo=true CP118128.1 Protein Homology CDS 3621177 3621604 . - 0 ID=cds-PUW31_17605;Parent=gene-PUW31_17605;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=PUW31_17605;product=50S ribosomal protein L11;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3621762 3622307 . - . ID=gene-PUW31_17610;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=PUW31_17610 CP118128.1 Protein Homology CDS 3621762 3622307 . - 0 ID=cds-WJH07980.1;Parent=gene-PUW31_17610;Dbxref=NCBI_GP:WJH07980.1;Name=WJH07980.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=PUW31_17610;product=transcription termination/antitermination protein NusG;protein_id=WJH07980.1;transl_table=11 CP118128.1 Genbank gene 3622309 3622692 . - . ID=gene-PUW31_17615;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=PUW31_17615 CP118128.1 Protein Homology CDS 3622309 3622692 . - 0 ID=cds-WJH07981.1;Parent=gene-PUW31_17615;Dbxref=NCBI_GP:WJH07981.1;Name=WJH07981.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=PUW31_17615;product=preprotein translocase subunit SecE;protein_id=WJH07981.1;transl_table=11 CP118128.1 Genbank gene 3622922 3624106 . - . ID=gene-PUW31_17620;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=PUW31_17620 CP118128.1 Protein Homology CDS 3622922 3624106 . - 0 ID=cds-WJH07982.1;Parent=gene-PUW31_17620;Dbxref=NCBI_GP:WJH07982.1;Name=WJH07982.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=PUW31_17620;product=elongation factor Tu;protein_id=WJH07982.1;transl_table=11 CP118128.1 Genbank gene 3624222 3624297 . - . ID=gene-PUW31_17625;Name=PUW31_17625;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_17625 CP118128.1 tRNAscan-SE tRNA 3624222 3624297 . - . ID=rna-PUW31_17625;Parent=gene-PUW31_17625;anticodon=(pos:complement(3624262..3624264));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_17625;product=tRNA-Thr CP118128.1 tRNAscan-SE exon 3624222 3624297 . - . ID=exon-PUW31_17625-1;Parent=rna-PUW31_17625;anticodon=(pos:complement(3624262..3624264));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_17625;product=tRNA-Thr CP118128.1 Genbank gene 3624304 3624378 . - . ID=gene-PUW31_17630;Name=PUW31_17630;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_17630 CP118128.1 tRNAscan-SE tRNA 3624304 3624378 . - . ID=rna-PUW31_17630;Parent=gene-PUW31_17630;anticodon=(pos:complement(3624343..3624345));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_17630;product=tRNA-Gly CP118128.1 tRNAscan-SE exon 3624304 3624378 . - . ID=exon-PUW31_17630-1;Parent=rna-PUW31_17630;anticodon=(pos:complement(3624343..3624345));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_17630;product=tRNA-Gly CP118128.1 Genbank gene 3624495 3624579 . - . ID=gene-PUW31_17635;Name=PUW31_17635;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_17635 CP118128.1 tRNAscan-SE tRNA 3624495 3624579 . - . ID=rna-PUW31_17635;Parent=gene-PUW31_17635;anticodon=(pos:complement(3624543..3624545));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_17635;product=tRNA-Tyr CP118128.1 tRNAscan-SE exon 3624495 3624579 . - . ID=exon-PUW31_17635-1;Parent=rna-PUW31_17635;anticodon=(pos:complement(3624543..3624545));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_17635;product=tRNA-Tyr CP118128.1 Genbank gene 3624588 3624663 . - . ID=gene-PUW31_17640;Name=PUW31_17640;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_17640 CP118128.1 tRNAscan-SE tRNA 3624588 3624663 . - . ID=rna-PUW31_17640;Parent=gene-PUW31_17640;anticodon=(pos:complement(3624628..3624630));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_17640;product=tRNA-Thr CP118128.1 tRNAscan-SE exon 3624588 3624663 . - . ID=exon-PUW31_17640-1;Parent=rna-PUW31_17640;anticodon=(pos:complement(3624628..3624630));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_17640;product=tRNA-Thr CP118128.1 Genbank gene 3624683 3624856 . + . ID=gene-PUW31_17645;Name=PUW31_17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17645 CP118128.1 Protein Homology CDS 3624683 3624856 . + 0 ID=cds-WJH07983.1;Parent=gene-PUW31_17645;Dbxref=NCBI_GP:WJH07983.1;Name=WJH07983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463014.1;locus_tag=PUW31_17645;product=hypothetical protein;protein_id=WJH07983.1;transl_table=11 CP118128.1 Genbank gene 3625065 3626015 . + . ID=gene-PUW31_17650;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=PUW31_17650 CP118128.1 Protein Homology CDS 3625065 3626015 . + 0 ID=cds-WJH07984.1;Parent=gene-PUW31_17650;Dbxref=NCBI_GP:WJH07984.1;Name=WJH07984.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463013.1;locus_tag=PUW31_17650;product=type I pantothenate kinase;protein_id=WJH07984.1;transl_table=11 CP118128.1 Genbank gene 3626050 3627012 . - . ID=gene-PUW31_17655;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=PUW31_17655 CP118128.1 Protein Homology CDS 3626050 3627012 . - 0 ID=cds-WJH07985.1;Parent=gene-PUW31_17655;Dbxref=NCBI_GP:WJH07985.1;Name=WJH07985.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin-[acetyl-CoA-carboxylase] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463012.1;locus_tag=PUW31_17655;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WJH07985.1;transl_table=11 CP118128.1 Genbank gene 3627009 3628037 . - . ID=gene-PUW31_17660;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=PUW31_17660 CP118128.1 Protein Homology CDS 3627009 3628037 . - 0 ID=cds-WJH07986.1;Parent=gene-PUW31_17660;Dbxref=NCBI_GP:WJH07986.1;Name=WJH07986.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463011.1;locus_tag=PUW31_17660;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WJH07986.1;transl_table=11 CP118128.1 Genbank gene 3628219 3628334 . - . ID=gene-PUW31_17665;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW31_17665 CP118128.1 cmsearch rRNA 3628219 3628334 . - . ID=rna-PUW31_17665;Parent=gene-PUW31_17665;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_17665;product=5S ribosomal RNA CP118128.1 cmsearch exon 3628219 3628334 . - . ID=exon-PUW31_17665-1;Parent=rna-PUW31_17665;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_17665;product=5S ribosomal RNA CP118128.1 Genbank gene 3628531 3631519 . - . ID=gene-PUW31_17670;Name=PUW31_17670;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW31_17670 CP118128.1 cmsearch rRNA 3628531 3631519 . - . ID=rna-PUW31_17670;Parent=gene-PUW31_17670;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_17670;product=23S ribosomal RNA CP118128.1 cmsearch exon 3628531 3631519 . - . ID=exon-PUW31_17670-1;Parent=rna-PUW31_17670;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_17670;product=23S ribosomal RNA CP118128.1 Genbank gene 3631713 3631788 . - . ID=gene-PUW31_17675;Name=PUW31_17675;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_17675 CP118128.1 tRNAscan-SE tRNA 3631713 3631788 . - . ID=rna-PUW31_17675;Parent=gene-PUW31_17675;anticodon=(pos:complement(3631752..3631754));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_17675;product=tRNA-Glu CP118128.1 tRNAscan-SE exon 3631713 3631788 . - . ID=exon-PUW31_17675-1;Parent=rna-PUW31_17675;anticodon=(pos:complement(3631752..3631754));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_17675;product=tRNA-Glu CP118128.1 Genbank gene 3631874 3633415 . - . ID=gene-PUW31_17680;Name=PUW31_17680;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW31_17680 CP118128.1 cmsearch rRNA 3631874 3633415 . - . ID=rna-PUW31_17680;Parent=gene-PUW31_17680;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_17680;product=16S ribosomal RNA CP118128.1 cmsearch exon 3631874 3633415 . - . ID=exon-PUW31_17680-1;Parent=rna-PUW31_17680;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_17680;product=16S ribosomal RNA CP118128.1 Genbank gene 3633793 3634338 . - . ID=gene-PUW31_17685;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=PUW31_17685 CP118128.1 Protein Homology CDS 3633793 3634338 . - 0 ID=cds-WJH07987.1;Parent=gene-PUW31_17685;Dbxref=NCBI_GP:WJH07987.1;Name=WJH07987.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462872.1;locus_tag=PUW31_17685;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WJH07987.1;transl_table=11 CP118128.1 Genbank gene 3634350 3635801 . - . ID=gene-PUW31_17690;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=PUW31_17690 CP118128.1 Protein Homology CDS 3634350 3635801 . - 0 ID=cds-WJH07988.1;Parent=gene-PUW31_17690;Dbxref=NCBI_GP:WJH07988.1;Name=WJH07988.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=PUW31_17690;product=Trk system potassium transporter TrkH;protein_id=WJH07988.1;transl_table=11 CP118128.1 Genbank gene 3635840 3636454 . - . ID=gene-PUW31_17695;Name=PUW31_17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17695 CP118128.1 Protein Homology CDS 3635840 3636454 . - 0 ID=cds-WJH07989.1;Parent=gene-PUW31_17695;Dbxref=NCBI_GP:WJH07989.1;Name=WJH07989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462870.1;locus_tag=PUW31_17695;product=IMPACT family protein;protein_id=WJH07989.1;transl_table=11 CP118128.1 Genbank gene 3636454 3637785 . - . ID=gene-PUW31_17700;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=PUW31_17700 CP118128.1 Protein Homology CDS 3636454 3637785 . - 0 ID=cds-WJH07990.1;Parent=gene-PUW31_17700;Dbxref=NCBI_GP:WJH07990.1;Name=WJH07990.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=PUW31_17700;product=Xaa-Pro dipeptidase;protein_id=WJH07990.1;transl_table=11 CP118128.1 Genbank gene 3637959 3640148 . + . ID=gene-PUW31_17705;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=PUW31_17705 CP118128.1 Protein Homology CDS 3637959 3640148 . + 0 ID=cds-WJH07991.1;Parent=gene-PUW31_17705;Dbxref=NCBI_GP:WJH07991.1;Name=WJH07991.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692;gbkey=CDS;gene=fadB;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462868.1;locus_tag=PUW31_17705;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WJH07991.1;transl_table=11 CP118128.1 Genbank gene 3640158 3641321 . + . ID=gene-PUW31_17710;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=PUW31_17710 CP118128.1 Protein Homology CDS 3640158 3641321 . + 0 ID=cds-WJH07992.1;Parent=gene-PUW31_17710;Dbxref=NCBI_GP:WJH07992.1;Name=WJH07992.1;Ontology_term=GO:0009062,GO:0003988;gbkey=CDS;gene=fadA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462867.1;locus_tag=PUW31_17710;product=acetyl-CoA C-acyltransferase FadA;protein_id=WJH07992.1;transl_table=11 CP118128.1 Genbank gene 3641518 3643341 . - . ID=gene-PUW31_17715;Name=PUW31_17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17715 CP118128.1 Protein Homology CDS 3641518 3643341 . - 0 ID=cds-WJH07993.1;Parent=gene-PUW31_17715;Dbxref=NCBI_GP:WJH07993.1;Name=WJH07993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669888.1;locus_tag=PUW31_17715;product=aryl-sulfate sulfotransferase;protein_id=WJH07993.1;transl_table=11 CP118128.1 Genbank gene 3643594 3644295 . - . ID=gene-PUW31_17720;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=PUW31_17720 CP118128.1 Protein Homology CDS 3643594 3644295 . - 0 ID=cds-WJH07994.1;Parent=gene-PUW31_17720;Dbxref=NCBI_GP:WJH07994.1;Name=WJH07994.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462864.1;locus_tag=PUW31_17720;product=NAD(P)H-flavin reductase;protein_id=WJH07994.1;transl_table=11 CP118128.1 Genbank gene 3644381 3645859 . - . ID=gene-PUW31_17725;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=PUW31_17725 CP118128.1 Protein Homology CDS 3644381 3645859 . - 0 ID=cds-WJH07995.1;Parent=gene-PUW31_17725;Dbxref=NCBI_GP:WJH07995.1;Name=WJH07995.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462863.1;locus_tag=PUW31_17725;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WJH07995.1;transl_table=11 CP118128.1 Genbank gene 3646045 3646533 . + . ID=gene-PUW31_17730;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=PUW31_17730 CP118128.1 Protein Homology CDS 3646045 3646533 . + 0 ID=cds-WJH07996.1;Parent=gene-PUW31_17730;Dbxref=NCBI_GP:WJH07996.1;Name=WJH07996.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462862.1;locus_tag=PUW31_17730;product=transcription/translation regulatory transformer protein RfaH;protein_id=WJH07996.1;transl_table=11 CP118128.1 Genbank gene 3646541 3647323 . - . ID=gene-PUW31_17735;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=PUW31_17735 CP118128.1 Protein Homology CDS 3646541 3647323 . - 0 ID=cds-WJH07997.1;Parent=gene-PUW31_17735;Dbxref=NCBI_GP:WJH07997.1;Name=WJH07997.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462861.3;locus_tag=PUW31_17735;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WJH07997.1;transl_table=11 CP118128.1 Genbank gene 3647365 3648144 . - . ID=gene-PUW31_17740;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=PUW31_17740 CP118128.1 Protein Homology CDS 3647365 3648144 . - 0 ID=cds-WJH07998.1;Parent=gene-PUW31_17740;Dbxref=NCBI_GP:WJH07998.1;Name=WJH07998.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462860.1;locus_tag=PUW31_17740;product=Sec-independent protein translocase subunit TatC;protein_id=WJH07998.1;transl_table=11 CP118128.1 Genbank gene 3648147 3648695 . - . ID=gene-PUW31_17745;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=PUW31_17745 CP118128.1 Protein Homology CDS 3648147 3648695 . - 0 ID=cds-WJH07999.1;Parent=gene-PUW31_17745;Dbxref=NCBI_GP:WJH07999.1;Name=WJH07999.1;Ontology_term=GO:0015031,GO:0015628;gbkey=CDS;gene=tatB;go_process=protein transport|0015031||IEA,protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462859.1;locus_tag=PUW31_17745;product=Sec-independent protein translocase protein TatB;protein_id=WJH07999.1;transl_table=11 CP118128.1 Genbank gene 3648699 3648953 . - . ID=gene-PUW31_17750;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=PUW31_17750 CP118128.1 Protein Homology CDS 3648699 3648953 . - 0 ID=cds-WJH08000.1;Parent=gene-PUW31_17750;Dbxref=NCBI_GP:WJH08000.1;Name=WJH08000.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462858.1;locus_tag=PUW31_17750;product=Sec-independent protein translocase subunit TatA;protein_id=WJH08000.1;transl_table=11 CP118128.1 Genbank gene 3649159 3650799 . - . ID=gene-PUW31_17755;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=PUW31_17755 CP118128.1 Protein Homology CDS 3649159 3650799 . - 0 ID=cds-WJH08001.1;Parent=gene-PUW31_17755;Dbxref=NCBI_GP:WJH08001.1;Name=WJH08001.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462857.1;locus_tag=PUW31_17755;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WJH08001.1;transl_table=11 CP118128.1 Genbank gene 3650796 3651401 . - . ID=gene-PUW31_17760;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=PUW31_17760 CP118128.1 Protein Homology CDS 3650796 3651401 . - 0 ID=cds-WJH08002.1;Parent=gene-PUW31_17760;Dbxref=NCBI_GP:WJH08002.1;Name=WJH08002.1;gbkey=CDS;gene=ubiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462856.1;locus_tag=PUW31_17760;product=ubiquinone biosynthesis protein UbiJ;protein_id=WJH08002.1;transl_table=11 CP118128.1 Genbank gene 3651411 3652166 . - . ID=gene-PUW31_17765;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=PUW31_17765 CP118128.1 Protein Homology CDS 3651411 3652166 . - 0 ID=cds-WJH08003.1;Parent=gene-PUW31_17765;Dbxref=NCBI_GP:WJH08003.1;Name=WJH08003.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462855.1;locus_tag=PUW31_17765;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WJH08003.1;transl_table=11 CP118128.1 Genbank gene 3652262 3653692 . - . ID=gene-PUW31_17770;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=PUW31_17770 CP118128.1 Protein Homology CDS 3652262 3653692 . - 0 ID=cds-WJH08004.1;Parent=gene-PUW31_17770;Dbxref=NCBI_GP:WJH08004.1;Name=WJH08004.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462854.1;locus_tag=PUW31_17770;product=DNA recombination protein RmuC;protein_id=WJH08004.1;transl_table=11 CP118128.1 Genbank gene 3653832 3654593 . - . ID=gene-PUW31_17775;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=PUW31_17775 CP118128.1 Protein Homology CDS 3653832 3654593 . - 0 ID=cds-WJH08005.1;Parent=gene-PUW31_17775;Dbxref=NCBI_GP:WJH08005.1;Name=WJH08005.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462853.1;locus_tag=PUW31_17775;product=uridine phosphorylase;protein_id=WJH08005.1;transl_table=11 CP118128.1 Genbank gene 3654852 3655664 . + . ID=gene-PUW31_17780;Name=PUW31_17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17780 CP118128.1 Protein Homology CDS 3654852 3655664 . + 0 ID=cds-WJH08006.1;Parent=gene-PUW31_17780;Dbxref=NCBI_GP:WJH08006.1;Name=WJH08006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462852.1;locus_tag=PUW31_17780;product=dienelactone hydrolase family protein;protein_id=WJH08006.1;transl_table=11 CP118128.1 Genbank gene 3655744 3657087 . - . ID=gene-PUW31_17785;Name=PUW31_17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17785 CP118128.1 Protein Homology CDS 3655744 3657087 . - 0 ID=cds-WJH08007.1;Parent=gene-PUW31_17785;Dbxref=NCBI_GP:WJH08007.1;Name=WJH08007.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462851.1;locus_tag=PUW31_17785;product=anaerobic sulfatase maturase;protein_id=WJH08007.1;transl_table=11 CP118128.1 Genbank gene 3657431 3659695 . - . ID=gene-PUW31_17790;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=PUW31_17790 CP118128.1 Protein Homology CDS 3657431 3659695 . - 0 ID=cds-WJH08008.1;Parent=gene-PUW31_17790;Dbxref=NCBI_GP:WJH08008.1;Name=WJH08008.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462850.1;locus_tag=PUW31_17790;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WJH08008.1;transl_table=11 CP118128.1 Genbank gene 3659944 3660897 . + . ID=gene-PUW31_17795;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=PUW31_17795 CP118128.1 Protein Homology CDS 3659944 3660897 . + 0 ID=cds-WJH08009.1;Parent=gene-PUW31_17795;Dbxref=NCBI_GP:WJH08009.1;Name=WJH08009.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462849.1;locus_tag=PUW31_17795;product=HTH-type transcriptional regulator MetR;protein_id=WJH08009.1;transl_table=11 CP118128.1 Genbank gene 3660785 3661684 . - . ID=gene-PUW31_17800;Name=PUW31_17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17800 CP118128.1 Protein Homology CDS 3660785 3661684 . - 0 ID=cds-WJH08010.1;Parent=gene-PUW31_17800;Dbxref=NCBI_GP:WJH08010.1;Name=WJH08010.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462848.1;locus_tag=PUW31_17800;product=carboxylate/amino acid/amine transporter;protein_id=WJH08010.1;transl_table=11 CP118128.1 Genbank gene 3661765 3662565 . - . ID=gene-PUW31_17805;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=PUW31_17805 CP118128.1 Protein Homology CDS 3661765 3662565 . - 0 ID=cds-WJH08011.1;Parent=gene-PUW31_17805;Dbxref=NCBI_GP:WJH08011.1;Name=WJH08011.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462847.1;locus_tag=PUW31_17805;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WJH08011.1;transl_table=11 CP118128.1 Genbank gene 3662581 3663597 . - . ID=gene-PUW31_17810;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=PUW31_17810 CP118128.1 Protein Homology CDS 3662581 3663597 . - 0 ID=cds-WJH08012.1;Parent=gene-PUW31_17810;Dbxref=NCBI_GP:WJH08012.1;Name=WJH08012.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462846.1;locus_tag=PUW31_17810;product=lysophospholipase L2;protein_id=WJH08012.1;transl_table=11 CP118128.1 Genbank gene 3663708 3664298 . + . ID=gene-PUW31_17815;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=PUW31_17815 CP118128.1 Protein Homology CDS 3663708 3664298 . + 0 ID=cds-WJH08013.1;Parent=gene-PUW31_17815;Dbxref=NCBI_GP:WJH08013.1;Name=WJH08013.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576440.1;locus_tag=PUW31_17815;product=homoserine/homoserine lactone efflux protein;protein_id=WJH08013.1;transl_table=11 CP118128.1 Genbank gene 3664322 3664942 . - . ID=gene-PUW31_17820;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=PUW31_17820 CP118128.1 Protein Homology CDS 3664322 3664942 . - 0 ID=cds-WJH08014.1;Parent=gene-PUW31_17820;Dbxref=NCBI_GP:WJH08014.1;Name=WJH08014.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462844.1;locus_tag=PUW31_17820;product=threonine export protein RhtC;protein_id=WJH08014.1;transl_table=11 CP118128.1 Genbank gene 3665006 3666835 . - . ID=gene-PUW31_17825;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=PUW31_17825 CP118128.1 Protein Homology CDS 3665006 3666835 . - 0 ID=cds-WJH10773.1;Parent=gene-PUW31_17825;Dbxref=NCBI_GP:WJH10773.1;Name=WJH10773.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=PUW31_17825;product=ATP-dependent DNA helicase RecQ;protein_id=WJH10773.1;transl_table=11 CP118128.1 Genbank gene 3666919 3667788 . - . ID=gene-PUW31_17830;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=PUW31_17830 CP118128.1 Protein Homology CDS 3666919 3667788 . - 0 ID=cds-WJH08015.1;Parent=gene-PUW31_17830;Dbxref=NCBI_GP:WJH08015.1;Name=WJH08015.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462842.1;locus_tag=PUW31_17830;product=phospholipase A;protein_id=WJH08015.1;transl_table=11 CP118128.1 Genbank gene 3667953 3668420 . + . ID=gene-PUW31_17835;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=PUW31_17835 CP118128.1 Protein Homology CDS 3667953 3668420 . + 0 ID=cds-WJH08016.1;Parent=gene-PUW31_17835;Dbxref=NCBI_GP:WJH08016.1;Name=WJH08016.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=PUW31_17835;product=acyl-CoA thioesterase YigI;protein_id=WJH08016.1;transl_table=11 CP118128.1 Genbank gene 3668464 3669351 . + . ID=gene-PUW31_17840;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=PUW31_17840 CP118128.1 Protein Homology CDS 3668464 3669351 . + 0 ID=cds-WJH10774.1;Parent=gene-PUW31_17840;Dbxref=NCBI_GP:WJH10774.1;Name=WJH10774.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000339076.1;locus_tag=PUW31_17840;product=EamA family transporter RarD;protein_id=WJH10774.1;transl_table=11 CP118128.1 Genbank gene 3669391 3669687 . - . ID=gene-PUW31_17845;Name=PUW31_17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17845 CP118128.1 Protein Homology CDS 3669391 3669687 . - 0 ID=cds-WJH08017.1;Parent=gene-PUW31_17845;Dbxref=NCBI_GP:WJH08017.1;Name=WJH08017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001170054.1;locus_tag=PUW31_17845;product=hypothetical protein;protein_id=WJH08017.1;transl_table=11 CP118128.1 Genbank gene 3669769 3670242 . + . ID=gene-PUW31_17850;Name=PUW31_17850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17850 CP118128.1 Protein Homology CDS 3669769 3670242 . + 0 ID=cds-WJH08018.1;Parent=gene-PUW31_17850;Dbxref=NCBI_GP:WJH08018.1;Name=WJH08018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751908.1;locus_tag=PUW31_17850;product=hypothetical protein;protein_id=WJH08018.1;transl_table=11 CP118128.1 Genbank gene 3670290 3671240 . - . ID=gene-PUW31_17855;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=PUW31_17855 CP118128.1 Protein Homology CDS 3670290 3671240 . - 0 ID=cds-WJH08019.1;Parent=gene-PUW31_17855;Dbxref=NCBI_GP:WJH08019.1;Name=WJH08019.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095;gbkey=CDS;gene=corA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=PUW31_17855;product=magnesium/cobalt transporter CorA;protein_id=WJH08019.1;transl_table=11 CP118128.1 Genbank gene 3671396 3671452 . - . ID=gene-PUW31_17860;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=PUW31_17860 CP118128.1 Protein Homology CDS 3671396 3671452 . - 0 ID=cds-WJH10775.1;Parent=gene-PUW31_17860;Dbxref=NCBI_GP:WJH10775.1;Name=WJH10775.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=PUW31_17860;product=protein YsgD;protein_id=WJH10775.1;transl_table=11 CP118128.1 Genbank gene 3671712 3673874 . - . ID=gene-PUW31_17865;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=PUW31_17865 CP118128.1 Protein Homology CDS 3671712 3673874 . - 0 ID=cds-WJH08020.1;Parent=gene-PUW31_17865;Dbxref=NCBI_GP:WJH08020.1;Name=WJH08020.1;Ontology_term=GO:0006268,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462836.1;locus_tag=PUW31_17865;product=DNA helicase II;protein_id=WJH08020.1;transl_table=11 CP118128.1 Genbank gene 3674010 3674726 . - . ID=gene-PUW31_17870;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=PUW31_17870 CP118128.1 Protein Homology CDS 3674010 3674726 . - 0 ID=cds-WJH08021.1;Parent=gene-PUW31_17870;Dbxref=NCBI_GP:WJH08021.1;Name=WJH08021.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462835.1;locus_tag=PUW31_17870;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WJH08021.1;transl_table=11 CP118128.1 Genbank gene 3674726 3675628 . - . ID=gene-PUW31_17875;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=PUW31_17875 CP118128.1 Protein Homology CDS 3674726 3675628 . - 0 ID=cds-WJH08022.1;Parent=gene-PUW31_17875;Dbxref=NCBI_GP:WJH08022.1;Name=WJH08022.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerC;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462834.1;locus_tag=PUW31_17875;product=tyrosine recombinase XerC;protein_id=WJH08022.1;transl_table=11 CP118128.1 Genbank gene 3675625 3676332 . - . ID=gene-PUW31_17880;Name=PUW31_17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17880 CP118128.1 Protein Homology CDS 3675625 3676332 . - 0 ID=cds-WJH08023.1;Parent=gene-PUW31_17880;Dbxref=NCBI_GP:WJH08023.1;Name=WJH08023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462833.1;locus_tag=PUW31_17880;product=DUF484 domain-containing protein;protein_id=WJH08023.1;transl_table=11 CP118128.1 Genbank gene 3676329 3677153 . - . ID=gene-PUW31_17885;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=PUW31_17885 CP118128.1 Protein Homology CDS 3676329 3677153 . - 0 ID=cds-WJH10776.1;Parent=gene-PUW31_17885;Dbxref=NCBI_GP:WJH10776.1;Name=WJH10776.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=PUW31_17885;product=diaminopimelate epimerase;protein_id=WJH10776.1;transl_table=11 CP118128.1 Genbank gene 3677190 3677393 . - . ID=gene-PUW31_17890;Name=PUW31_17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17890 CP118128.1 Protein Homology CDS 3677190 3677393 . - 0 ID=cds-WJH08024.1;Parent=gene-PUW31_17890;Dbxref=NCBI_GP:WJH08024.1;Name=WJH08024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462831.1;locus_tag=PUW31_17890;product=lipoprotein;protein_id=WJH08024.1;transl_table=11 CP118128.1 Genbank gene 3677579 3677830 . + . ID=gene-PUW31_17895;Name=PUW31_17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17895 CP118128.1 GeneMarkS-2+ CDS 3677579 3677830 . + 0 ID=cds-WJH08025.1;Parent=gene-PUW31_17895;Dbxref=NCBI_GP:WJH08025.1;Name=WJH08025.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_17895;product=hypothetical protein;protein_id=WJH08025.1;transl_table=11 CP118128.1 Genbank pseudogene 3677806 3678102 . + . ID=gene-PUW31_17900;Name=PUW31_17900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_17900;pseudo=true CP118128.1 Protein Homology CDS 3677806 3678102 . + 0 ID=cds-PUW31_17900;Parent=gene-PUW31_17900;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001604297.1;locus_tag=PUW31_17900;product=hypothetical protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3678090 3678479 . + . ID=gene-PUW31_17905;Name=PUW31_17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17905 CP118128.1 Protein Homology CDS 3678090 3678479 . + 0 ID=cds-WJH08026.1;Parent=gene-PUW31_17905;Dbxref=NCBI_GP:WJH08026.1;Name=WJH08026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462830.1;locus_tag=PUW31_17905;product=DUF3021 family protein;protein_id=WJH08026.1;transl_table=11 CP118128.1 Genbank gene 3678549 3678869 . + . ID=gene-PUW31_17910;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=PUW31_17910 CP118128.1 Protein Homology CDS 3678549 3678869 . + 0 ID=cds-WJH08027.1;Parent=gene-PUW31_17910;Dbxref=NCBI_GP:WJH08027.1;Name=WJH08027.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=PUW31_17910;product=iron donor protein CyaY;protein_id=WJH08027.1;transl_table=11 CP118128.1 Genbank gene 3678947 3681493 . - . ID=gene-PUW31_17915;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=PUW31_17915 CP118128.1 Protein Homology CDS 3678947 3681493 . - 0 ID=cds-WJH08028.1;Parent=gene-PUW31_17915;Dbxref=NCBI_GP:WJH08028.1;Name=WJH08028.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462825.1;locus_tag=PUW31_17915;product=class I adenylate cyclase;protein_id=WJH08028.1;transl_table=11 CP118128.1 Genbank gene 3681870 3682811 . + . ID=gene-PUW31_17920;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=PUW31_17920 CP118128.1 Protein Homology CDS 3681870 3682811 . + 0 ID=cds-WJH08029.1;Parent=gene-PUW31_17920;Dbxref=NCBI_GP:WJH08029.1;Name=WJH08029.1;Ontology_term=GO:0006779,GO:0004418,GO:0005737;gbkey=CDS;gene=hemC;go_component=cytoplasm|0005737||IEA;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=PUW31_17920;product=hydroxymethylbilane synthase;protein_id=WJH08029.1;transl_table=11 CP118128.1 Genbank gene 3682808 3683548 . + . ID=gene-PUW31_17925;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=PUW31_17925 CP118128.1 Protein Homology CDS 3682808 3683548 . + 0 ID=cds-WJH08030.1;Parent=gene-PUW31_17925;Dbxref=NCBI_GP:WJH08030.1;Name=WJH08030.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462823.1;locus_tag=PUW31_17925;product=uroporphyrinogen-III synthase;protein_id=WJH08030.1;transl_table=11 CP118128.1 Genbank gene 3683570 3684709 . + . ID=gene-PUW31_17930;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=PUW31_17930 CP118128.1 Protein Homology CDS 3683570 3684709 . + 0 ID=cds-WJH08031.1;Parent=gene-PUW31_17930;Dbxref=NCBI_GP:WJH08031.1;Name=WJH08031.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000138965.1;locus_tag=PUW31_17930;product=uroporphyrinogen-III C-methyltransferase;protein_id=WJH08031.1;transl_table=11 CP118128.1 Genbank pseudogene 3684712 3685907 . + . ID=gene-PUW31_17935;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=pseudogene;locus_tag=PUW31_17935;pseudo=true CP118128.1 Protein Homology CDS 3684712 3685907 . + 0 ID=cds-PUW31_17935;Parent=gene-PUW31_17935;Note=frameshifted;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=PUW31_17935;product=protoheme IX biogenesis protein HemY;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3686490 3686566 . - . ID=gene-PUW31_17940;Name=PUW31_17940;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_17940 CP118128.1 tRNAscan-SE tRNA 3686490 3686566 . - . ID=rna-PUW31_17940;Parent=gene-PUW31_17940;anticodon=(pos:complement(3686530..3686532));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_17940;product=tRNA-Pro CP118128.1 tRNAscan-SE exon 3686490 3686566 . - . ID=exon-PUW31_17940-1;Parent=rna-PUW31_17940;anticodon=(pos:complement(3686530..3686532));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_17940;product=tRNA-Pro CP118128.1 Genbank gene 3686609 3686695 . - . ID=gene-PUW31_17945;Name=PUW31_17945;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_17945 CP118128.1 tRNAscan-SE tRNA 3686609 3686695 . - . ID=rna-PUW31_17945;Parent=gene-PUW31_17945;anticodon=(pos:complement(3686659..3686661));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_17945;product=tRNA-Leu CP118128.1 tRNAscan-SE exon 3686609 3686695 . - . ID=exon-PUW31_17945-1;Parent=rna-PUW31_17945;anticodon=(pos:complement(3686659..3686661));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_17945;product=tRNA-Leu CP118128.1 Genbank gene 3686716 3686791 . - . ID=gene-PUW31_17950;Name=PUW31_17950;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_17950 CP118128.1 tRNAscan-SE tRNA 3686716 3686791 . - . ID=rna-PUW31_17950;Parent=gene-PUW31_17950;anticodon=(pos:complement(3686756..3686758));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_17950;product=tRNA-His CP118128.1 tRNAscan-SE exon 3686716 3686791 . - . ID=exon-PUW31_17950-1;Parent=rna-PUW31_17950;anticodon=(pos:complement(3686756..3686758));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_17950;product=tRNA-His CP118128.1 Genbank gene 3686846 3686922 . - . ID=gene-PUW31_17955;Name=PUW31_17955;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_17955 CP118128.1 tRNAscan-SE tRNA 3686846 3686922 . - . ID=rna-PUW31_17955;Parent=gene-PUW31_17955;anticodon=(pos:complement(3686886..3686888));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_17955;product=tRNA-Arg CP118128.1 tRNAscan-SE exon 3686846 3686922 . - . ID=exon-PUW31_17955-1;Parent=rna-PUW31_17955;anticodon=(pos:complement(3686886..3686888));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_17955;product=tRNA-Arg CP118128.1 Genbank gene 3687025 3688410 . - . ID=gene-PUW31_17960;Name=PUW31_17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17960 CP118128.1 Protein Homology CDS 3687025 3688410 . - 0 ID=cds-WJH08032.1;Parent=gene-PUW31_17960;Dbxref=NCBI_GP:WJH08032.1;Name=WJH08032.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462820.1;locus_tag=PUW31_17960;product=amino acid permease;protein_id=WJH08032.1;transl_table=11 CP118128.1 Genbank gene 3688617 3689357 . - . ID=gene-PUW31_17965;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=PUW31_17965 CP118128.1 Protein Homology CDS 3688617 3689357 . - 0 ID=cds-WJH08033.1;Parent=gene-PUW31_17965;Dbxref=NCBI_GP:WJH08033.1;Name=WJH08033.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462819.1;locus_tag=PUW31_17965;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WJH08033.1;transl_table=11 CP118128.1 Genbank gene 3689354 3690712 . - . ID=gene-PUW31_17970;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=PUW31_17970 CP118128.1 Protein Homology CDS 3689354 3690712 . - 0 ID=cds-WJH08034.1;Parent=gene-PUW31_17970;Dbxref=NCBI_GP:WJH08034.1;Name=WJH08034.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462818.1;locus_tag=PUW31_17970;product=ECA oligosaccharide polymerase;protein_id=WJH08034.1;transl_table=11 CP118128.1 Genbank gene 3690709 3691788 . - . ID=gene-PUW31_17975;Name=PUW31_17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17975 CP118128.1 Protein Homology CDS 3690709 3691788 . - 0 ID=cds-WJH08035.1;Parent=gene-PUW31_17975;Dbxref=NCBI_GP:WJH08035.1;Name=WJH08035.1;Ontology_term=GO:0036065,GO:0008417;gbkey=CDS;go_function=fucosyltransferase activity|0008417||IEA;go_process=fucosylation|0036065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462817.1;locus_tag=PUW31_17975;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WJH08035.1;transl_table=11 CP118128.1 Genbank gene 3691785 3693035 . - . ID=gene-PUW31_17980;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=PUW31_17980 CP118128.1 Protein Homology CDS 3691785 3693035 . - 0 ID=cds-WJH08036.1;Parent=gene-PUW31_17980;Dbxref=NCBI_GP:WJH08036.1;Name=WJH08036.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462816.1;locus_tag=PUW31_17980;product=lipid III flippase WzxE;protein_id=WJH08036.1;transl_table=11 CP118128.1 Genbank gene 3693037 3694167 . - . ID=gene-PUW31_17985;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=PUW31_17985 CP118128.1 Protein Homology CDS 3693037 3694167 . - 0 ID=cds-WJH08037.1;Parent=gene-PUW31_17985;Dbxref=NCBI_GP:WJH08037.1;Name=WJH08037.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462815.1;locus_tag=PUW31_17985;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WJH08037.1;transl_table=11 CP118128.1 Genbank gene 3694172 3694849 . - . ID=gene-PUW31_17990;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=PUW31_17990 CP118128.1 Protein Homology CDS 3694172 3694849 . - 0 ID=cds-WJH08038.1;Parent=gene-PUW31_17990;Dbxref=NCBI_GP:WJH08038.1;Name=WJH08038.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=PUW31_17990;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WJH08038.1;transl_table=11 CP118128.1 Genbank gene 3694827 3695141 . - . ID=gene-PUW31_17995;Name=PUW31_17995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_17995 CP118128.1 Protein Homology CDS 3694827 3695141 . - 0 ID=cds-WJH08039.1;Parent=gene-PUW31_17995;Dbxref=NCBI_GP:WJH08039.1;Name=WJH08039.1;Ontology_term=GO:0009058,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658205.1;locus_tag=PUW31_17995;product=sugar phosphate nucleotidyltransferase;protein_id=WJH08039.1;transl_table=11 CP118128.1 Genbank gene 3695084 3696151 . - . ID=gene-PUW31_18000;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=PUW31_18000 CP118128.1 Protein Homology CDS 3695084 3696151 . - 0 ID=cds-WJH08040.1;Parent=gene-PUW31_18000;Dbxref=NCBI_GP:WJH08040.1;Name=WJH08040.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462812.1;locus_tag=PUW31_18000;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WJH08040.1;transl_table=11 CP118128.1 Genbank gene 3696151 3697413 . - . ID=gene-PUW31_18005;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=PUW31_18005 CP118128.1 Protein Homology CDS 3696151 3697413 . - 0 ID=cds-WJH08041.1;Parent=gene-PUW31_18005;Dbxref=NCBI_GP:WJH08041.1;Name=WJH08041.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462811.1;locus_tag=PUW31_18005;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WJH08041.1;transl_table=11 CP118128.1 Genbank gene 3697410 3698540 . - . ID=gene-PUW31_18010;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=PUW31_18010 CP118128.1 Protein Homology CDS 3697410 3698540 . - 0 ID=cds-WJH08042.1;Parent=gene-PUW31_18010;Dbxref=NCBI_GP:WJH08042.1;Name=WJH08042.1;Ontology_term=GO:0009103,GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462810.1;locus_tag=PUW31_18010;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=WJH08042.1;transl_table=11 CP118128.1 Genbank gene 3698596 3699642 . - . ID=gene-PUW31_18015;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=PUW31_18015 CP118128.1 Protein Homology CDS 3698596 3699642 . - 0 ID=cds-WJH08043.1;Parent=gene-PUW31_18015;Dbxref=NCBI_GP:WJH08043.1;Name=WJH08043.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462809.1;locus_tag=PUW31_18015;product=ECA polysaccharide chain length modulation protein;protein_id=WJH08043.1;transl_table=11 CP118128.1 Genbank pseudogene 3699654 3700756 . - . ID=gene-PUW31_18020;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=pseudogene;locus_tag=PUW31_18020;pseudo=true CP118128.1 Protein Homology CDS 3699654 3700756 . - 0 ID=cds-PUW31_18020;Parent=gene-PUW31_18020;Note=frameshifted;Ontology_term=GO:0009246,GO:0016780;gbkey=CDS;gene=wecA;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462808.1;locus_tag=PUW31_18020;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3700986 3702245 . - . ID=gene-PUW31_18025;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=PUW31_18025 CP118128.1 Protein Homology CDS 3700986 3702245 . - 0 ID=cds-WJH08044.1;Parent=gene-PUW31_18025;Dbxref=NCBI_GP:WJH08044.1;Name=WJH08044.1;Ontology_term=GO:0006353,GO:0004386,GO:0008186;gbkey=CDS;gene=rho;go_function=helicase activity|0004386||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=PUW31_18025;product=transcription termination factor Rho;protein_id=WJH08044.1;transl_table=11 CP118128.1 Genbank gene 3702333 3702416 . - . ID=gene-PUW31_18030;Name=PUW31_18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18030 CP118128.1 Protein Homology CDS 3702333 3702416 . - 0 ID=cds-WJH10777.1;Parent=gene-PUW31_18030;Dbxref=NCBI_GP:WJH10777.1;Name=WJH10777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=PUW31_18030;product=rho operon leader peptide;protein_id=WJH10777.1;transl_table=11 CP118128.1 Genbank gene 3702664 3702993 . - . ID=gene-PUW31_18035;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=PUW31_18035 CP118128.1 Protein Homology CDS 3702664 3702993 . - 0 ID=cds-WJH08045.1;Parent=gene-PUW31_18035;Dbxref=NCBI_GP:WJH08045.1;Name=WJH08045.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=PUW31_18035;product=thioredoxin TrxA;protein_id=WJH08045.1;transl_table=11 CP118128.1 Genbank gene 3703137 3704402 . + . ID=gene-PUW31_18040;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=PUW31_18040 CP118128.1 Protein Homology CDS 3703137 3704402 . + 0 ID=cds-WJH08046.1;Parent=gene-PUW31_18040;Dbxref=NCBI_GP:WJH08046.1;Name=WJH08046.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462805.1;locus_tag=PUW31_18040;product=ATP-dependent RNA helicase RhlB;protein_id=WJH08046.1;transl_table=11 CP118128.1 Genbank gene 3704539 3706020 . + . ID=gene-PUW31_18045;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=PUW31_18045 CP118128.1 Protein Homology CDS 3704539 3706020 . + 0 ID=cds-WJH08047.1;Parent=gene-PUW31_18045;Dbxref=NCBI_GP:WJH08047.1;Name=WJH08047.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462804.1;locus_tag=PUW31_18045;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WJH08047.1;transl_table=11 CP118128.1 Genbank gene 3706060 3708084 . - . ID=gene-PUW31_18050;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=PUW31_18050 CP118128.1 Protein Homology CDS 3706060 3708084 . - 0 ID=cds-WJH08048.1;Parent=gene-PUW31_18050;Dbxref=NCBI_GP:WJH08048.1;Name=WJH08048.1;Ontology_term=GO:0006268,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462803.1;locus_tag=PUW31_18050;product=DNA helicase Rep;protein_id=WJH08048.1;transl_table=11 CP118128.1 Genbank pseudogene 3708184 3708336 . - . ID=gene-PUW31_18055;Name=PUW31_18055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_18055;pseudo=true CP118128.1 Protein Homology CDS 3708184 3708336 . - 0 ID=cds-PUW31_18055;Parent=gene-PUW31_18055;Note=involved in nicotinamide riboside transport%3B frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506088.1;locus_tag=PUW31_18055;product=nicotinamide riboside transporter PnuC;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3708622 3708903 . + . ID=gene-PUW31_18060;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=PUW31_18060 CP118128.1 Protein Homology CDS 3708622 3708903 . + 0 ID=cds-WJH08049.1;Parent=gene-PUW31_18060;Dbxref=NCBI_GP:WJH08049.1;Name=WJH08049.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462801.1;locus_tag=PUW31_18060;product=peptidylprolyl isomerase PpiC;protein_id=WJH08049.1;transl_table=11 CP118128.1 Genbank gene 3708995 3710470 . - . ID=gene-PUW31_18065;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=PUW31_18065 CP118128.1 Protein Homology CDS 3708995 3710470 . - 0 ID=cds-WJH08050.1;Parent=gene-PUW31_18065;Dbxref=NCBI_GP:WJH08050.1;Name=WJH08050.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=PUW31_18065;product=ketol-acid reductoisomerase;protein_id=WJH08050.1;transl_table=11 CP118128.1 Genbank gene 3710635 3711522 . + . ID=gene-PUW31_18070;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=PUW31_18070 CP118128.1 Protein Homology CDS 3710635 3711522 . + 0 ID=cds-WJH08051.1;Parent=gene-PUW31_18070;Dbxref=NCBI_GP:WJH08051.1;Name=WJH08051.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462799.1;locus_tag=PUW31_18070;product=HTH-type transcriptional activator IlvY;protein_id=WJH08051.1;transl_table=11 CP118128.1 Genbank gene 3711525 3711866 . - . ID=gene-PUW31_18075;Name=PUW31_18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18075 CP118128.1 Protein Homology CDS 3711525 3711866 . - 0 ID=cds-WJH08052.1;Parent=gene-PUW31_18075;Dbxref=NCBI_GP:WJH08052.1;Name=WJH08052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462798.1;locus_tag=PUW31_18075;product=helix-turn-helix domain-containing protein;protein_id=WJH08052.1;transl_table=11 CP118128.1 Genbank gene 3711863 3712180 . - . ID=gene-PUW31_18080;Name=PUW31_18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18080 CP118128.1 Protein Homology CDS 3711863 3712180 . - 0 ID=cds-WJH10778.1;Parent=gene-PUW31_18080;Dbxref=NCBI_GP:WJH10778.1;Name=WJH10778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462797.1;locus_tag=PUW31_18080;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WJH10778.1;transl_table=11 CP118128.1 Genbank gene 3712463 3714007 . - . ID=gene-PUW31_18085;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=PUW31_18085 CP118128.1 Protein Homology CDS 3712463 3714007 . - 0 ID=cds-WJH10779.1;Parent=gene-PUW31_18085;Dbxref=NCBI_GP:WJH10779.1;Name=WJH10779.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=L-threonine ammonia-lyase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462796.1;locus_tag=PUW31_18085;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WJH10779.1;transl_table=11 CP118128.1 Genbank gene 3714010 3715860 . - . ID=gene-PUW31_18090;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=PUW31_18090 CP118128.1 Protein Homology CDS 3714010 3715860 . - 0 ID=cds-WJH08053.1;Parent=gene-PUW31_18090;Dbxref=NCBI_GP:WJH08053.1;Name=WJH08053.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=PUW31_18090;product=dihydroxy-acid dehydratase;protein_id=WJH08053.1;transl_table=11 CP118128.1 Genbank gene 3716020 3716949 . - . ID=gene-PUW31_18095;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=PUW31_18095 CP118128.1 Protein Homology CDS 3716020 3716949 . - 0 ID=cds-WJH08054.1;Parent=gene-PUW31_18095;Dbxref=NCBI_GP:WJH08054.1;Name=WJH08054.1;Ontology_term=GO:0009082,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462794.1;locus_tag=PUW31_18095;product=branched-chain-amino-acid transaminase;protein_id=WJH08054.1;transl_table=11 CP118128.1 Genbank gene 3716967 3717230 . - . ID=gene-PUW31_18100;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=PUW31_18100 CP118128.1 Protein Homology CDS 3716967 3717230 . - 0 ID=cds-WJH08055.1;Parent=gene-PUW31_18100;Dbxref=NCBI_GP:WJH08055.1;Name=WJH08055.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=PUW31_18100;product=acetolactate synthase 2 small subunit;protein_id=WJH08055.1;transl_table=11 CP118128.1 Genbank gene 3717227 3718873 . - . ID=gene-PUW31_18105;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=PUW31_18105 CP118128.1 Protein Homology CDS 3717227 3718873 . - 0 ID=cds-WJH08056.1;Parent=gene-PUW31_18105;Dbxref=NCBI_GP:WJH08056.1;Name=WJH08056.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=PUW31_18105;product=acetolactate synthase 2 catalytic subunit;protein_id=WJH08056.1;transl_table=11 CP118128.1 Genbank gene 3718876 3718926 . - . ID=gene-PUW31_18110;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=PUW31_18110 CP118128.1 Protein Homology CDS 3718876 3718926 . - 0 ID=cds-WJH10780.1;Parent=gene-PUW31_18110;Dbxref=NCBI_GP:WJH10780.1;Name=WJH10780.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791259.1;locus_tag=PUW31_18110;product=peptide IlvX;protein_id=WJH10780.1;transl_table=11 CP118128.1 Genbank gene 3719012 3719110 . - . ID=gene-PUW31_18115;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=PUW31_18115 CP118128.1 Protein Homology CDS 3719012 3719110 . - 0 ID=cds-WJH08057.1;Parent=gene-PUW31_18115;Dbxref=NCBI_GP:WJH08057.1;Name=WJH08057.1;gbkey=CDS;gene=ilvL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=PUW31_18115;product=ilv operon leader peptide;protein_id=WJH08057.1;transl_table=11 CP118128.1 Genbank gene 3719462 3720982 . + . ID=gene-PUW31_18120;Name=PUW31_18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18120 CP118128.1 Protein Homology CDS 3719462 3720982 . + 0 ID=cds-WJH08058.1;Parent=gene-PUW31_18120;Dbxref=NCBI_GP:WJH08058.1;Name=WJH08058.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=PUW31_18120;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WJH08058.1;transl_table=11 CP118128.1 Genbank gene 3721007 3721345 . - . ID=gene-PUW31_18125;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=PUW31_18125 CP118128.1 Protein Homology CDS 3721007 3721345 . - 0 ID=cds-WJH08059.1;Parent=gene-PUW31_18125;Dbxref=NCBI_GP:WJH08059.1;Name=WJH08059.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462789.1;locus_tag=PUW31_18125;product=macrodomain Ori organization protein MaoP;protein_id=WJH08059.1;transl_table=11 CP118128.1 Genbank gene 3721452 3722300 . + . ID=gene-PUW31_18130;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=PUW31_18130 CP118128.1 Protein Homology CDS 3721452 3722300 . + 0 ID=cds-WJH08060.1;Parent=gene-PUW31_18130;Dbxref=NCBI_GP:WJH08060.1;Name=WJH08060.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462788.3;locus_tag=PUW31_18130;product=HTH-type transcriptional regulator HdfR;protein_id=WJH08060.1;transl_table=11 CP118128.1 Genbank gene 3722402 3722476 . - . ID=gene-PUW31_18135;Name=PUW31_18135;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_18135 CP118128.1 tRNAscan-SE tRNA 3722402 3722476 . - . ID=rna-PUW31_18135;Parent=gene-PUW31_18135;anticodon=(pos:complement(3722442..3722444));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_18135;product=tRNA-Trp CP118128.1 tRNAscan-SE exon 3722402 3722476 . - . ID=exon-PUW31_18135-1;Parent=rna-PUW31_18135;anticodon=(pos:complement(3722442..3722444));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_18135;product=tRNA-Trp CP118128.1 Genbank gene 3722485 3722561 . - . ID=gene-PUW31_18140;Name=PUW31_18140;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_18140 CP118128.1 tRNAscan-SE tRNA 3722485 3722561 . - . ID=rna-PUW31_18140;Parent=gene-PUW31_18140;anticodon=(pos:complement(3722525..3722527));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_18140;product=tRNA-Asp CP118128.1 tRNAscan-SE exon 3722485 3722561 . - . ID=exon-PUW31_18140-1;Parent=rna-PUW31_18140;anticodon=(pos:complement(3722525..3722527));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_18140;product=tRNA-Asp CP118128.1 Genbank gene 3722753 3722868 . - . ID=gene-PUW31_18145;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW31_18145 CP118128.1 cmsearch rRNA 3722753 3722868 . - . ID=rna-PUW31_18145;Parent=gene-PUW31_18145;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_18145;product=5S ribosomal RNA CP118128.1 cmsearch exon 3722753 3722868 . - . ID=exon-PUW31_18145-1;Parent=rna-PUW31_18145;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_18145;product=5S ribosomal RNA CP118128.1 Genbank gene 3723065 3726053 . - . ID=gene-PUW31_18150;Name=PUW31_18150;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW31_18150 CP118128.1 cmsearch rRNA 3723065 3726053 . - . ID=rna-PUW31_18150;Parent=gene-PUW31_18150;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_18150;product=23S ribosomal RNA CP118128.1 cmsearch exon 3723065 3726053 . - . ID=exon-PUW31_18150-1;Parent=rna-PUW31_18150;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_18150;product=23S ribosomal RNA CP118128.1 Genbank gene 3726236 3726311 . - . ID=gene-PUW31_18155;Name=PUW31_18155;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_18155 CP118128.1 tRNAscan-SE tRNA 3726236 3726311 . - . ID=rna-PUW31_18155;Parent=gene-PUW31_18155;anticodon=(pos:complement(3726276..3726278));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_18155;product=tRNA-Ala CP118128.1 tRNAscan-SE exon 3726236 3726311 . - . ID=exon-PUW31_18155-1;Parent=rna-PUW31_18155;anticodon=(pos:complement(3726276..3726278));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_18155;product=tRNA-Ala CP118128.1 Genbank gene 3726423 3726499 . - . ID=gene-PUW31_18160;Name=PUW31_18160;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_18160 CP118128.1 tRNAscan-SE tRNA 3726423 3726499 . - . ID=rna-PUW31_18160;Parent=gene-PUW31_18160;anticodon=(pos:complement(3726463..3726465));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_18160;product=tRNA-Ile CP118128.1 tRNAscan-SE exon 3726423 3726499 . - . ID=exon-PUW31_18160-1;Parent=rna-PUW31_18160;anticodon=(pos:complement(3726463..3726465));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_18160;product=tRNA-Ile CP118128.1 Genbank gene 3726569 3728110 . - . ID=gene-PUW31_18165;Name=PUW31_18165;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW31_18165 CP118128.1 cmsearch rRNA 3726569 3728110 . - . ID=rna-PUW31_18165;Parent=gene-PUW31_18165;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_18165;product=16S ribosomal RNA CP118128.1 cmsearch exon 3726569 3728110 . - . ID=exon-PUW31_18165-1;Parent=rna-PUW31_18165;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_18165;product=16S ribosomal RNA CP118128.1 Genbank gene 3728591 3729295 . + . ID=gene-PUW31_18170;Name=PUW31_18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18170 CP118128.1 Protein Homology CDS 3728591 3729295 . + 0 ID=cds-WJH08061.1;Parent=gene-PUW31_18170;Dbxref=NCBI_GP:WJH08061.1;Name=WJH08061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462787.1;locus_tag=PUW31_18170;product=FadR/GntR family transcriptional regulator;protein_id=WJH08061.1;transl_table=11 CP118128.1 Genbank gene 3729307 3730734 . + . ID=gene-PUW31_18175;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=PUW31_18175 CP118128.1 Protein Homology CDS 3729307 3730734 . + 0 ID=cds-WJH08062.1;Parent=gene-PUW31_18175;Dbxref=NCBI_GP:WJH08062.1;Name=WJH08062.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462786.1;locus_tag=PUW31_18175;product=multidrug transporter subunit MdtD;protein_id=WJH08062.1;transl_table=11 CP118128.1 Genbank gene 3730700 3731698 . - . ID=gene-PUW31_18180;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=PUW31_18180 CP118128.1 Protein Homology CDS 3730700 3731698 . - 0 ID=cds-WJH08063.1;Parent=gene-PUW31_18180;Dbxref=NCBI_GP:WJH08063.1;Name=WJH08063.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462785.1;locus_tag=PUW31_18180;product=ribose operon transcriptional repressor RbsR;protein_id=WJH08063.1;transl_table=11 CP118128.1 Genbank pseudogene 3731702 3732630 . - . ID=gene-PUW31_18185;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=pseudogene;locus_tag=PUW31_18185;pseudo=true CP118128.1 Protein Homology CDS 3731702 3732630 . - 0 ID=cds-PUW31_18185;Parent=gene-PUW31_18185;Note=frameshifted;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462784.1;locus_tag=PUW31_18185;product=ribokinase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 3732763 3733652 . - . ID=gene-PUW31_18190;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=pseudogene;locus_tag=PUW31_18190;pseudo=true CP118128.1 Protein Homology CDS 3732763 3733652 . - 0 ID=cds-PUW31_18190;Parent=gene-PUW31_18190;Note=frameshifted;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462783.1;locus_tag=PUW31_18190;product=ribose ABC transporter substrate-binding protein RbsB;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3733677 3734642 . - . ID=gene-PUW31_18195;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=PUW31_18195 CP118128.1 Protein Homology CDS 3733677 3734642 . - 0 ID=cds-WJH08064.1;Parent=gene-PUW31_18195;Dbxref=NCBI_GP:WJH08064.1;Name=WJH08064.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=PUW31_18195;product=ribose ABC transporter permease;protein_id=WJH08064.1;transl_table=11 CP118128.1 Genbank pseudogene 3734648 3736153 . - . ID=gene-PUW31_18200;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=pseudogene;locus_tag=PUW31_18200;pseudo=true CP118128.1 Protein Homology CDS 3734648 3736153 . - 0 ID=cds-PUW31_18200;Parent=gene-PUW31_18200;Note=internal stop;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462781.1;locus_tag=PUW31_18200;product=ribose ABC transporter ATP-binding protein RbsA;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3736161 3736580 . - . ID=gene-PUW31_18205;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=PUW31_18205 CP118128.1 Protein Homology CDS 3736161 3736580 . - 0 ID=cds-WJH08065.1;Parent=gene-PUW31_18205;Dbxref=NCBI_GP:WJH08065.1;Name=WJH08065.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462780.1;locus_tag=PUW31_18205;product=D-ribose pyranase;protein_id=WJH08065.1;transl_table=11 CP118128.1 Genbank gene 3736797 3738665 . - . ID=gene-PUW31_18210;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=PUW31_18210 CP118128.1 Protein Homology CDS 3736797 3738665 . - 0 ID=cds-WJH08066.1;Parent=gene-PUW31_18210;Dbxref=NCBI_GP:WJH08066.1;Name=WJH08066.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=PUW31_18210;product=low affinity potassium transporter Kup;protein_id=WJH08066.1;transl_table=11 CP118128.1 Genbank gene 3739009 3740505 . + . ID=gene-PUW31_18215;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=PUW31_18215 CP118128.1 Protein Homology CDS 3739009 3740505 . + 0 ID=cds-WJH08067.1;Parent=gene-PUW31_18215;Dbxref=NCBI_GP:WJH08067.1;Name=WJH08067.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462778.1;locus_tag=PUW31_18215;product=ATPase RavA;protein_id=WJH08067.1;transl_table=11 CP118128.1 Genbank gene 3740499 3741950 . + . ID=gene-PUW31_18220;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=PUW31_18220 CP118128.1 Protein Homology CDS 3740499 3741950 . + 0 ID=cds-WJH08068.1;Parent=gene-PUW31_18220;Dbxref=NCBI_GP:WJH08068.1;Name=WJH08068.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=PUW31_18220;product=ATPase RavA stimulator ViaA;protein_id=WJH08068.1;transl_table=11 CP118128.1 Genbank pseudogene 3741955 3742947 . - . ID=gene-PUW31_18225;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=pseudogene;locus_tag=PUW31_18225;pseudo=true CP118128.1 Protein Homology CDS 3741955 3742947 . - 0 ID=cds-PUW31_18225;Parent=gene-PUW31_18225;Note=internal stop;Ontology_term=GO:0006529,GO:0004071;gbkey=CDS;gene=asnA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462776.1;locus_tag=PUW31_18225;product=aspartate--ammonia ligase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3743098 3743556 . + . ID=gene-PUW31_18230;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=PUW31_18230 CP118128.1 Protein Homology CDS 3743098 3743556 . + 0 ID=cds-WJH08069.1;Parent=gene-PUW31_18230;Dbxref=NCBI_GP:WJH08069.1;Name=WJH08069.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462775.1;locus_tag=PUW31_18230;product=transcriptional regulator AsnC;protein_id=WJH08069.1;transl_table=11 CP118128.1 Genbank gene 3743646 3744089 . + . ID=gene-PUW31_18235;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=PUW31_18235 CP118128.1 Protein Homology CDS 3743646 3744089 . + 0 ID=cds-WJH08070.1;Parent=gene-PUW31_18235;Dbxref=NCBI_GP:WJH08070.1;Name=WJH08070.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462774.1;locus_tag=PUW31_18235;product=FMN-binding protein MioC;protein_id=WJH08070.1;transl_table=11 CP118128.1 Genbank gene 3744468 3746357 . + . ID=gene-PUW31_18240;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=PUW31_18240 CP118128.1 Protein Homology CDS 3744468 3746357 . + 0 ID=cds-WJH08071.1;Parent=gene-PUW31_18240;Dbxref=NCBI_GP:WJH08071.1;Name=WJH08071.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=PUW31_18240;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WJH08071.1;transl_table=11 CP118128.1 Genbank gene 3746460 3747083 . + . ID=gene-PUW31_18245;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=PUW31_18245 CP118128.1 Protein Homology CDS 3746460 3747083 . + 0 ID=cds-WJH08072.1;Parent=gene-PUW31_18245;Dbxref=NCBI_GP:WJH08072.1;Name=WJH08072.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462772.3;locus_tag=PUW31_18245;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WJH08072.1;transl_table=11 CP118128.1 Genbank gene 3747699 3748079 . + . ID=gene-PUW31_18250;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=PUW31_18250 CP118128.1 Protein Homology CDS 3747699 3748079 . + 0 ID=cds-WJH10781.1;Parent=gene-PUW31_18250;Dbxref=NCBI_GP:WJH10781.1;Name=WJH10781.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462771.1;locus_tag=PUW31_18250;product=F0F1 ATP synthase subunit I;protein_id=WJH10781.1;transl_table=11 CP118128.1 Genbank gene 3748088 3748903 . + . ID=gene-PUW31_18255;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=PUW31_18255 CP118128.1 Protein Homology CDS 3748088 3748903 . + 0 ID=cds-WJH08073.1;Parent=gene-PUW31_18255;Dbxref=NCBI_GP:WJH08073.1;Name=WJH08073.1;Ontology_term=GO:0015986,GO:0015078,GO:0045263;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=PUW31_18255;product=F0F1 ATP synthase subunit A;protein_id=WJH08073.1;transl_table=11 CP118128.1 Genbank gene 3748950 3749189 . + . ID=gene-PUW31_18260;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=PUW31_18260 CP118128.1 Protein Homology CDS 3748950 3749189 . + 0 ID=cds-WJH08074.1;Parent=gene-PUW31_18260;Dbxref=NCBI_GP:WJH08074.1;Name=WJH08074.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=PUW31_18260;product=F0F1 ATP synthase subunit C;protein_id=WJH08074.1;transl_table=11 CP118128.1 Genbank gene 3749249 3749719 . + . ID=gene-PUW31_18265;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=PUW31_18265 CP118128.1 Protein Homology CDS 3749249 3749719 . + 0 ID=cds-WJH08075.1;Parent=gene-PUW31_18265;Dbxref=NCBI_GP:WJH08075.1;Name=WJH08075.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=PUW31_18265;product=F0F1 ATP synthase subunit B;protein_id=WJH08075.1;transl_table=11 CP118128.1 Genbank gene 3749734 3750267 . + . ID=gene-PUW31_18270;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=PUW31_18270 CP118128.1 Protein Homology CDS 3749734 3750267 . + 0 ID=cds-WJH08076.1;Parent=gene-PUW31_18270;Dbxref=NCBI_GP:WJH08076.1;Name=WJH08076.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=PUW31_18270;product=F0F1 ATP synthase subunit delta;protein_id=WJH08076.1;transl_table=11 CP118128.1 Genbank gene 3750280 3751821 . + . ID=gene-PUW31_18275;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=PUW31_18275 CP118128.1 Protein Homology CDS 3750280 3751821 . + 0 ID=cds-WJH08077.1;Parent=gene-PUW31_18275;Dbxref=NCBI_GP:WJH08077.1;Name=WJH08077.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=PUW31_18275;product=F0F1 ATP synthase subunit alpha;protein_id=WJH08077.1;transl_table=11 CP118128.1 Genbank gene 3751872 3752735 . + . ID=gene-PUW31_18280;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=PUW31_18280 CP118128.1 Protein Homology CDS 3751872 3752735 . + 0 ID=cds-WJH08078.1;Parent=gene-PUW31_18280;Dbxref=NCBI_GP:WJH08078.1;Name=WJH08078.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=PUW31_18280;product=F0F1 ATP synthase subunit gamma;protein_id=WJH08078.1;transl_table=11 CP118128.1 Genbank gene 3752762 3754144 . + . ID=gene-PUW31_18285;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=PUW31_18285 CP118128.1 Protein Homology CDS 3752762 3754144 . + 0 ID=cds-WJH08079.1;Parent=gene-PUW31_18285;Dbxref=NCBI_GP:WJH08079.1;Name=WJH08079.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=PUW31_18285;product=F0F1 ATP synthase subunit beta;protein_id=WJH08079.1;transl_table=11 CP118128.1 Genbank gene 3754165 3754584 . + . ID=gene-PUW31_18290;Name=PUW31_18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18290 CP118128.1 Protein Homology CDS 3754165 3754584 . + 0 ID=cds-WJH08080.1;Parent=gene-PUW31_18290;Dbxref=NCBI_GP:WJH08080.1;Name=WJH08080.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=PUW31_18290;product=F0F1 ATP synthase subunit epsilon;protein_id=WJH08080.1;transl_table=11 CP118128.1 Genbank gene 3754815 3755513 . + . ID=gene-PUW31_18295;Name=PUW31_18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18295 CP118128.1 Protein Homology CDS 3754815 3755513 . + 0 ID=cds-WJH08081.1;Parent=gene-PUW31_18295;Dbxref=NCBI_GP:WJH08081.1;Name=WJH08081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462762.1;locus_tag=PUW31_18295;product=Bax inhibitor-1 family protein;protein_id=WJH08081.1;transl_table=11 CP118128.1 Genbank gene 3755833 3757203 . + . ID=gene-PUW31_18300;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=PUW31_18300 CP118128.1 Protein Homology CDS 3755833 3757203 . + 0 ID=cds-WJH08082.1;Parent=gene-PUW31_18300;Dbxref=NCBI_GP:WJH08082.1;Name=WJH08082.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462761.1;locus_tag=PUW31_18300;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WJH08082.1;transl_table=11 CP118128.1 Genbank pseudogene 3757392 3759220 . + . ID=gene-PUW31_18305;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=pseudogene;locus_tag=PUW31_18305;pseudo=true CP118128.1 Protein Homology CDS 3757392 3759220 . + 0 ID=cds-PUW31_18305;Parent=gene-PUW31_18305;Note=frameshifted;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=PUW31_18305;product=glutamine--fructose-6-phosphate transaminase (isomerizing);pseudo=true;transl_table=11 CP118128.1 Genbank gene 3759371 3761128 . - . ID=gene-PUW31_18310;Name=PUW31_18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18310 CP118128.1 Protein Homology CDS 3759371 3761128 . - 0 ID=cds-WJH08083.1;Parent=gene-PUW31_18310;Dbxref=NCBI_GP:WJH08083.1;Name=WJH08083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462759.1;locus_tag=PUW31_18310;product=SgrR family transcriptional regulator;protein_id=WJH08083.1;transl_table=11 CP118128.1 Genbank gene 3761223 3762041 . + . ID=gene-PUW31_18315;Name=PUW31_18315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18315 CP118128.1 Protein Homology CDS 3761223 3762041 . + 0 ID=cds-WJH08084.1;Parent=gene-PUW31_18315;Dbxref=NCBI_GP:WJH08084.1;Name=WJH08084.1;Ontology_term=GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462758.1;locus_tag=PUW31_18315;product=shikimate 5-dehydrogenase;protein_id=WJH08084.1;transl_table=11 CP118128.1 Genbank gene 3762090 3763463 . + . ID=gene-PUW31_18320;Name=PUW31_18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18320 CP118128.1 Protein Homology CDS 3762090 3763463 . + 0 ID=cds-WJH08085.1;Parent=gene-PUW31_18320;Dbxref=NCBI_GP:WJH08085.1;Name=WJH08085.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462757.1;locus_tag=PUW31_18320;product=fructose-specific PTS transporter subunit EIIC;protein_id=WJH08085.1;transl_table=11 CP118128.1 Genbank gene 3763629 3764669 . + . ID=gene-PUW31_18325;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=PUW31_18325 CP118128.1 Protein Homology CDS 3763629 3764669 . + 0 ID=cds-WJH08086.1;Parent=gene-PUW31_18325;Dbxref=NCBI_GP:WJH08086.1;Name=WJH08086.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462756.1;locus_tag=PUW31_18325;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WJH08086.1;transl_table=11 CP118128.1 Genbank gene 3764805 3765764 . + . ID=gene-PUW31_18330;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=PUW31_18330 CP118128.1 Protein Homology CDS 3764805 3765764 . + 0 ID=cds-WJH08087.1;Parent=gene-PUW31_18330;Dbxref=NCBI_GP:WJH08087.1;Name=WJH08087.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=PUW31_18330;product=phosphate ABC transporter permease PstC;protein_id=WJH08087.1;transl_table=11 CP118128.1 Genbank pseudogene 3765764 3766653 . + . ID=gene-PUW31_18335;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=pseudogene;locus_tag=PUW31_18335;pseudo=true CP118128.1 Protein Homology CDS 3765764 3766653 . + 0 ID=cds-PUW31_18335;Parent=gene-PUW31_18335;Note=frameshifted;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462754.1;locus_tag=PUW31_18335;product=phosphate ABC transporter permease PstA;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3766740 3767513 . + . ID=gene-PUW31_18340;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=PUW31_18340 CP118128.1 Protein Homology CDS 3766740 3767513 . + 0 ID=cds-WJH08088.1;Parent=gene-PUW31_18340;Dbxref=NCBI_GP:WJH08088.1;Name=WJH08088.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=PUW31_18340;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WJH08088.1;transl_table=11 CP118128.1 Genbank gene 3767528 3768253 . + . ID=gene-PUW31_18345;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=PUW31_18345 CP118128.1 Protein Homology CDS 3767528 3768253 . + 0 ID=cds-WJH08089.1;Parent=gene-PUW31_18345;Dbxref=NCBI_GP:WJH08089.1;Name=WJH08089.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=cellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462752.1;locus_tag=PUW31_18345;product=phosphate signaling complex protein PhoU;protein_id=WJH08089.1;transl_table=11 CP118128.1 Genbank gene 3768348 3769013 . - . ID=gene-PUW31_18350;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=PUW31_18350 CP118128.1 Protein Homology CDS 3768348 3769013 . - 0 ID=cds-WJH08090.1;Parent=gene-PUW31_18350;Dbxref=NCBI_GP:WJH08090.1;Name=WJH08090.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462751.1;locus_tag=PUW31_18350;product=6-phosphogluconate phosphatase;protein_id=WJH08090.1;transl_table=11 CP118128.1 Genbank gene 3769182 3770519 . + . ID=gene-PUW31_18355;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=PUW31_18355 CP118128.1 Protein Homology CDS 3769182 3770519 . + 0 ID=cds-WJH08091.1;Parent=gene-PUW31_18355;Dbxref=NCBI_GP:WJH08091.1;Name=WJH08091.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=PUW31_18355;product=adenine permease AdeP;protein_id=WJH08091.1;transl_table=11 CP118128.1 Genbank gene 3770564 3771148 . - . ID=gene-PUW31_18360;Name=PUW31_18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18360 CP118128.1 Protein Homology CDS 3770564 3771148 . - 0 ID=cds-WJH08092.1;Parent=gene-PUW31_18360;Dbxref=NCBI_GP:WJH08092.1;Name=WJH08092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462749.3;locus_tag=PUW31_18360;product=NAD(P)H-dependent oxidoreductase;protein_id=WJH08092.1;transl_table=11 CP118128.1 Genbank gene 3771148 3771903 . - . ID=gene-PUW31_18365;Name=PUW31_18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18365 CP118128.1 Protein Homology CDS 3771148 3771903 . - 0 ID=cds-WJH08093.1;Parent=gene-PUW31_18365;Dbxref=NCBI_GP:WJH08093.1;Name=WJH08093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462748.1;locus_tag=PUW31_18365;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=WJH08093.1;transl_table=11 CP118128.1 Genbank gene 3772061 3772999 . - . ID=gene-PUW31_18370;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=PUW31_18370 CP118128.1 Protein Homology CDS 3772061 3772999 . - 0 ID=cds-WJH08094.1;Parent=gene-PUW31_18370;Dbxref=NCBI_GP:WJH08094.1;Name=WJH08094.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462747.1;locus_tag=PUW31_18370;product=HTH-type transcriptional regulator YidZ;protein_id=WJH08094.1;transl_table=11 CP118128.1 Genbank gene 3772968 3774092 . - . ID=gene-PUW31_18375;Name=PUW31_18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18375 CP118128.1 Protein Homology CDS 3772968 3774092 . - 0 ID=cds-WJH08095.1;Parent=gene-PUW31_18375;Dbxref=NCBI_GP:WJH08095.1;Name=WJH08095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462746.1;locus_tag=PUW31_18375;product=MFS transporter;protein_id=WJH08095.1;transl_table=11 CP118128.1 Genbank gene 3774275 3775639 . - . ID=gene-PUW31_18380;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=PUW31_18380 CP118128.1 Protein Homology CDS 3774275 3775639 . - 0 ID=cds-WJH08096.1;Parent=gene-PUW31_18380;Dbxref=NCBI_GP:WJH08096.1;Name=WJH08096.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=PUW31_18380;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WJH08096.1;transl_table=11 CP118128.1 Genbank gene 3775781 3777427 . - . ID=gene-PUW31_18385;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=PUW31_18385 CP118128.1 Protein Homology CDS 3775781 3777427 . - 0 ID=cds-WJH08097.1;Parent=gene-PUW31_18385;Dbxref=NCBI_GP:WJH08097.1;Name=WJH08097.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462742.1;locus_tag=PUW31_18385;product=membrane protein insertase YidC;protein_id=WJH08097.1;transl_table=11 CP118128.1 Genbank gene 3777430 3777687 . - . ID=gene-PUW31_18390;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=PUW31_18390 CP118128.1 Protein Homology CDS 3777430 3777687 . - 0 ID=cds-WJH08098.1;Parent=gene-PUW31_18390;Dbxref=NCBI_GP:WJH08098.1;Name=WJH08098.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=PUW31_18390;product=membrane protein insertion efficiency factor YidD;protein_id=WJH08098.1;transl_table=11 CP118128.1 Genbank pseudogene 3777651 3778009 . - . ID=gene-PUW31_18395;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=pseudogene;locus_tag=PUW31_18395;pseudo=true CP118128.1 Protein Homology CDS 3777651 3778009 . - 0 ID=cds-PUW31_18395;Parent=gene-PUW31_18395;Note=frameshifted;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=PUW31_18395;product=ribonuclease P protein component;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3778026 3778166 . - . ID=gene-PUW31_18400;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=PUW31_18400 CP118128.1 Protein Homology CDS 3778026 3778166 . - 0 ID=cds-WJH08099.1;Parent=gene-PUW31_18400;Dbxref=NCBI_GP:WJH08099.1;Name=WJH08099.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=PUW31_18400;product=50S ribosomal protein L34;protein_id=WJH08099.1;transl_table=11 CP118128.1 Genbank gene 3778827 3780227 . + . ID=gene-PUW31_18405;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=PUW31_18405 CP118128.1 Protein Homology CDS 3778827 3780227 . + 0 ID=cds-WJH08100.1;Parent=gene-PUW31_18405;Dbxref=NCBI_GP:WJH08100.1;Name=WJH08100.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462738.1;locus_tag=PUW31_18405;product=chromosomal replication initiator protein DnaA;protein_id=WJH08100.1;transl_table=11 CP118128.1 Genbank gene 3780232 3781332 . + . ID=gene-PUW31_18410;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=PUW31_18410 CP118128.1 Protein Homology CDS 3780232 3781332 . + 0 ID=cds-WJH08101.1;Parent=gene-PUW31_18410;Dbxref=NCBI_GP:WJH08101.1;Name=WJH08101.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=PUW31_18410;product=DNA polymerase III subunit beta;protein_id=WJH08101.1;transl_table=11 CP118128.1 Genbank gene 3781480 3782553 . + . ID=gene-PUW31_18415;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=PUW31_18415 CP118128.1 Protein Homology CDS 3781480 3782553 . + 0 ID=cds-WJH08102.1;Parent=gene-PUW31_18415;Dbxref=NCBI_GP:WJH08102.1;Name=WJH08102.1;Ontology_term=GO:0006281,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=PUW31_18415;product=DNA replication/repair protein RecF;protein_id=WJH08102.1;transl_table=11 CP118128.1 Genbank gene 3782582 3784996 . + . ID=gene-PUW31_18420;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=PUW31_18420 CP118128.1 Protein Homology CDS 3782582 3784996 . + 0 ID=cds-WJH08103.1;Parent=gene-PUW31_18420;Dbxref=NCBI_GP:WJH08103.1;Name=WJH08103.1;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=PUW31_18420;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WJH08103.1;transl_table=11 CP118128.1 Genbank gene 3785015 3785911 . - . ID=gene-PUW31_18425;Name=PUW31_18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18425 CP118128.1 Protein Homology CDS 3785015 3785911 . - 0 ID=cds-WJH08104.1;Parent=gene-PUW31_18425;Dbxref=NCBI_GP:WJH08104.1;Name=WJH08104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462734.1;locus_tag=PUW31_18425;product=LysR family transcriptional regulator;protein_id=WJH08104.1;transl_table=11 CP118128.1 Genbank gene 3786026 3787219 . - . ID=gene-PUW31_18430;Name=PUW31_18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18430 CP118128.1 Protein Homology CDS 3786026 3787219 . - 0 ID=cds-WJH08105.1;Parent=gene-PUW31_18430;Dbxref=NCBI_GP:WJH08105.1;Name=WJH08105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462733.1;locus_tag=PUW31_18430;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WJH08105.1;transl_table=11 CP118128.1 Genbank pseudogene 3787233 3788495 . - . ID=gene-PUW31_18435;Name=PUW31_18435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_18435;pseudo=true CP118128.1 Protein Homology CDS 3787233 3788495 . - 0 ID=cds-PUW31_18435;Parent=gene-PUW31_18435;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462732.1;locus_tag=PUW31_18435;product=MFS transporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3788800 3789645 . + . ID=gene-PUW31_18440;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=PUW31_18440 CP118128.1 Protein Homology CDS 3788800 3789645 . + 0 ID=cds-WJH08106.1;Parent=gene-PUW31_18440;Dbxref=NCBI_GP:WJH08106.1;Name=WJH08106.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462731.1;locus_tag=PUW31_18440;product=sugar-phosphatase;protein_id=WJH08106.1;transl_table=11 CP118128.1 Genbank gene 3789906 3790595 . + . ID=gene-PUW31_18445;Name=dgoR;gbkey=Gene;gene=dgoR;gene_biotype=protein_coding;locus_tag=PUW31_18445 CP118128.1 Protein Homology CDS 3789906 3790595 . + 0 ID=cds-WJH08107.1;Parent=gene-PUW31_18445;Dbxref=NCBI_GP:WJH08107.1;Name=WJH08107.1;gbkey=CDS;gene=dgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462730.1;locus_tag=PUW31_18445;product=D-galactonate utilization transcriptional regulator DgoR;protein_id=WJH08107.1;transl_table=11 CP118128.1 Genbank gene 3790592 3791470 . + . ID=gene-PUW31_18450;Name=PUW31_18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18450 CP118128.1 Protein Homology CDS 3790592 3791470 . + 0 ID=cds-WJH08108.1;Parent=gene-PUW31_18450;Dbxref=NCBI_GP:WJH08108.1;Name=WJH08108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462729.1;locus_tag=PUW31_18450;product=2-dehydro-3-deoxygalactonokinase;protein_id=WJH08108.1;transl_table=11 CP118128.1 Genbank gene 3791454 3792071 . + . ID=gene-PUW31_18455;Name=PUW31_18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18455 CP118128.1 Protein Homology CDS 3791454 3792071 . + 0 ID=cds-WJH08109.1;Parent=gene-PUW31_18455;Dbxref=NCBI_GP:WJH08109.1;Name=WJH08109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229569.1;locus_tag=PUW31_18455;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WJH08109.1;transl_table=11 CP118128.1 Genbank gene 3792068 3793216 . + . ID=gene-PUW31_18460;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=PUW31_18460 CP118128.1 Protein Homology CDS 3792068 3793216 . + 0 ID=cds-WJH08110.1;Parent=gene-PUW31_18460;Dbxref=NCBI_GP:WJH08110.1;Name=WJH08110.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=PUW31_18460;product=galactonate dehydratase;protein_id=WJH08110.1;transl_table=11 CP118128.1 Genbank gene 3793301 3794638 . + . ID=gene-PUW31_18465;Name=PUW31_18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18465 CP118128.1 Protein Homology CDS 3793301 3794638 . + 0 ID=cds-WJH08111.1;Parent=gene-PUW31_18465;Dbxref=NCBI_GP:WJH08111.1;Name=WJH08111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462727.1;locus_tag=PUW31_18465;product=MFS transporter;protein_id=WJH08111.1;transl_table=11 CP118128.1 Genbank pseudogene 3794664 3797398 . - . ID=gene-PUW31_18470;Name=torS;gbkey=Gene;gene=torS;gene_biotype=pseudogene;locus_tag=PUW31_18470;pseudo=true CP118128.1 Protein Homology CDS 3794664 3797398 . - 0 ID=cds-PUW31_18470;Parent=gene-PUW31_18470;Note=frameshifted;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462726.1;locus_tag=PUW31_18470;product=TMAO reductase system sensor histidine kinase/response regulator TorS;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3797478 3798518 . + . ID=gene-PUW31_18475;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=PUW31_18475 CP118128.1 Protein Homology CDS 3797478 3798518 . + 0 ID=cds-WJH08112.1;Parent=gene-PUW31_18475;Dbxref=NCBI_GP:WJH08112.1;Name=WJH08112.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462725.1;locus_tag=PUW31_18475;product=TMAO reductase system periplasmic protein TorT;protein_id=WJH08112.1;transl_table=11 CP118128.1 Genbank gene 3798491 3799183 . - . ID=gene-PUW31_18480;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=PUW31_18480 CP118128.1 Protein Homology CDS 3798491 3799183 . - 0 ID=cds-WJH10782.1;Parent=gene-PUW31_18480;Dbxref=NCBI_GP:WJH10782.1;Name=WJH10782.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462724.1;locus_tag=PUW31_18480;product=two-component system response regulator TorR;protein_id=WJH10782.1;transl_table=11 CP118128.1 Genbank gene 3799313 3800497 . + . ID=gene-PUW31_18485;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=PUW31_18485 CP118128.1 Protein Homology CDS 3799313 3800497 . + 0 ID=cds-WJH08113.1;Parent=gene-PUW31_18485;Dbxref=NCBI_GP:WJH08113.1;Name=WJH08113.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462723.1;locus_tag=PUW31_18485;product=pentaheme c-type cytochrome TorC;protein_id=WJH08113.1;transl_table=11 CP118128.1 Genbank gene 3800487 3803039 . + . ID=gene-PUW31_18490;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=PUW31_18490 CP118128.1 Protein Homology CDS 3800487 3803039 . + 0 ID=cds-WJH08114.1;Parent=gene-PUW31_18490;Dbxref=NCBI_GP:WJH08114.1;Name=WJH08114.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462722.1;locus_tag=PUW31_18490;product=trimethylamine-N-oxide reductase TorA;protein_id=WJH08114.1;transl_table=11 CP118128.1 Genbank gene 3803032 3803664 . + . ID=gene-PUW31_18495;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=PUW31_18495 CP118128.1 Protein Homology CDS 3803032 3803664 . + 0 ID=cds-WJH08115.1;Parent=gene-PUW31_18495;Dbxref=NCBI_GP:WJH08115.1;Name=WJH08115.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462721.1;locus_tag=PUW31_18495;product=molecular chaperone TorD;protein_id=WJH08115.1;transl_table=11 CP118128.1 Genbank gene 3803861 3805252 . + . ID=gene-PUW31_18500;Name=PUW31_18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18500 CP118128.1 Protein Homology CDS 3803861 3805252 . + 0 ID=cds-WJH10783.1;Parent=gene-PUW31_18500;Dbxref=NCBI_GP:WJH10783.1;Name=WJH10783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462720.1;locus_tag=PUW31_18500;product=cytochrome-c peroxidase;protein_id=WJH10783.1;transl_table=11 CP118128.1 Genbank gene 3805258 3805875 . + . ID=gene-PUW31_18505;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=PUW31_18505 CP118128.1 Protein Homology CDS 3805258 3805875 . + 0 ID=cds-WJH10784.1;Parent=gene-PUW31_18505;Dbxref=NCBI_GP:WJH10784.1;Name=WJH10784.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461197.1;locus_tag=PUW31_18505;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WJH10784.1;transl_table=11 CP118128.1 Genbank gene 3805872 3806531 . + . ID=gene-PUW31_18510;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=PUW31_18510 CP118128.1 Protein Homology CDS 3805872 3806531 . + 0 ID=cds-WJH08116.1;Parent=gene-PUW31_18510;Dbxref=NCBI_GP:WJH08116.1;Name=WJH08116.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=PUW31_18510;product=heme exporter protein CcmB;protein_id=WJH08116.1;transl_table=11 CP118128.1 Genbank gene 3806583 3807320 . + . ID=gene-PUW31_18515;Name=PUW31_18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18515 CP118128.1 Protein Homology CDS 3806583 3807320 . + 0 ID=cds-WJH08117.1;Parent=gene-PUW31_18515;Dbxref=NCBI_GP:WJH08117.1;Name=WJH08117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=PUW31_18515;product=heme ABC transporter permease;protein_id=WJH08117.1;transl_table=11 CP118128.1 Genbank gene 3807317 3807529 . + . ID=gene-PUW31_18520;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=PUW31_18520 CP118128.1 Protein Homology CDS 3807317 3807529 . + 0 ID=cds-WJH08118.1;Parent=gene-PUW31_18520;Dbxref=NCBI_GP:WJH08118.1;Name=WJH08118.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461194.1;locus_tag=PUW31_18520;product=heme exporter protein CcmD;protein_id=WJH08118.1;transl_table=11 CP118128.1 Genbank gene 3807526 3808005 . + . ID=gene-PUW31_18525;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=PUW31_18525 CP118128.1 Protein Homology CDS 3807526 3808005 . + 0 ID=cds-WJH08119.1;Parent=gene-PUW31_18525;Dbxref=NCBI_GP:WJH08119.1;Name=WJH08119.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461193.1;locus_tag=PUW31_18525;product=cytochrome c maturation protein CcmE;protein_id=WJH08119.1;transl_table=11 CP118128.1 Genbank gene 3808002 3809933 . + . ID=gene-PUW31_18530;Name=PUW31_18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18530 CP118128.1 Protein Homology CDS 3808002 3809933 . + 0 ID=cds-WJH08120.1;Parent=gene-PUW31_18530;Dbxref=NCBI_GP:WJH08120.1;Name=WJH08120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=PUW31_18530;product=heme lyase CcmF/NrfE family subunit;protein_id=WJH08120.1;transl_table=11 CP118128.1 Genbank gene 3809930 3810487 . + . ID=gene-PUW31_18535;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=PUW31_18535 CP118128.1 Protein Homology CDS 3809930 3810487 . + 0 ID=cds-WJH08121.1;Parent=gene-PUW31_18535;Dbxref=NCBI_GP:WJH08121.1;Name=WJH08121.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=PUW31_18535;product=thiol:disulfide interchange protein DsbE;protein_id=WJH08121.1;transl_table=11 CP118128.1 Genbank gene 3810484 3811536 . + . ID=gene-PUW31_18540;Name=PUW31_18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18540 CP118128.1 Protein Homology CDS 3810484 3811536 . + 0 ID=cds-WJH08122.1;Parent=gene-PUW31_18540;Dbxref=NCBI_GP:WJH08122.1;Name=WJH08122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=PUW31_18540;product=cytochrome c-type biogenesis protein CcmH;protein_id=WJH08122.1;transl_table=11 CP118128.1 Genbank gene 3811658 3812884 . + . ID=gene-PUW31_18545;Name=PUW31_18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18545 CP118128.1 Protein Homology CDS 3811658 3812884 . + 0 ID=cds-WJH08123.1;Parent=gene-PUW31_18545;Dbxref=NCBI_GP:WJH08123.1;Name=WJH08123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462711.1;locus_tag=PUW31_18545;product=DUF3748 domain-containing protein;protein_id=WJH08123.1;transl_table=11 CP118128.1 Genbank gene 3812886 3813218 . - . ID=gene-PUW31_18550;Name=PUW31_18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18550 CP118128.1 Protein Homology CDS 3812886 3813218 . - 0 ID=cds-WJH10785.1;Parent=gene-PUW31_18550;Dbxref=NCBI_GP:WJH10785.1;Name=WJH10785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675643.1;locus_tag=PUW31_18550;product=YceK/YidQ family lipoprotein;protein_id=WJH10785.1;transl_table=11 CP118128.1 cmsearch sequence_feature 3813461 3813534 . + . ID=id-CP118128.1:3813461..3813534;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 CP118128.1 Genbank gene 3813528 3813941 . + . ID=gene-PUW31_18555;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=PUW31_18555 CP118128.1 Protein Homology CDS 3813528 3813941 . + 0 ID=cds-WJH08124.1;Parent=gene-PUW31_18555;Dbxref=NCBI_GP:WJH08124.1;Name=WJH08124.1;gbkey=CDS;gene=ibpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=PUW31_18555;product=heat shock chaperone IbpA;protein_id=WJH08124.1;transl_table=11 CP118128.1 Genbank gene 3814051 3814479 . + . ID=gene-PUW31_18560;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=PUW31_18560 CP118128.1 Protein Homology CDS 3814051 3814479 . + 0 ID=cds-WJH08125.1;Parent=gene-PUW31_18560;Dbxref=NCBI_GP:WJH08125.1;Name=WJH08125.1;gbkey=CDS;gene=ibpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462708.3;locus_tag=PUW31_18560;product=heat shock chaperone IbpB;protein_id=WJH08125.1;transl_table=11 CP118128.1 Genbank gene 3814667 3816643 . + . ID=gene-PUW31_18565;Name=PUW31_18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18565 CP118128.1 Protein Homology CDS 3814667 3816643 . + 0 ID=cds-WJH08126.1;Parent=gene-PUW31_18565;Dbxref=NCBI_GP:WJH08126.1;Name=WJH08126.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: protein motif:HMM:NF003007.0;locus_tag=PUW31_18565;product=putative transporter;protein_id=WJH08126.1;transl_table=11 CP118128.1 Genbank gene 3816763 3817110 . + . ID=gene-PUW31_18570;Name=PUW31_18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18570 CP118128.1 Protein Homology CDS 3816763 3817110 . + 0 ID=cds-WJH08127.1;Parent=gene-PUW31_18570;Dbxref=NCBI_GP:WJH08127.1;Name=WJH08127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462706.1;locus_tag=PUW31_18570;product=YidH family protein;protein_id=WJH08127.1;transl_table=11 CP118128.1 Genbank gene 3817100 3817462 . + . ID=gene-PUW31_18575;Name=PUW31_18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18575 CP118128.1 Protein Homology CDS 3817100 3817462 . + 0 ID=cds-WJH08128.1;Parent=gene-PUW31_18575;Dbxref=NCBI_GP:WJH08128.1;Name=WJH08128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462705.1;locus_tag=PUW31_18575;product=DUF202 domain-containing protein;protein_id=WJH08128.1;transl_table=11 CP118128.1 Genbank gene 3817459 3817989 . + . ID=gene-PUW31_18580;Name=PUW31_18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18580 CP118128.1 Protein Homology CDS 3817459 3817989 . + 0 ID=cds-WJH08129.1;Parent=gene-PUW31_18580;Dbxref=NCBI_GP:WJH08129.1;Name=WJH08129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462704.1;locus_tag=PUW31_18580;product=radical SAM protein;protein_id=WJH08129.1;transl_table=11 CP118128.1 Genbank gene 3818071 3819393 . - . ID=gene-PUW31_18585;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=PUW31_18585 CP118128.1 Protein Homology CDS 3818071 3819393 . - 0 ID=cds-WJH08130.1;Parent=gene-PUW31_18585;Dbxref=NCBI_GP:WJH08130.1;Name=WJH08130.1;Ontology_term=GO:0046416,GO:0008721,GO:0005737;gbkey=CDS;gene=dsdA;go_component=cytoplasm|0005737||IEA;go_function=D-serine ammonia-lyase activity|0008721||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462703.1;locus_tag=PUW31_18585;product=D-serine ammonia-lyase;protein_id=WJH08130.1;transl_table=11 CP118128.1 Genbank gene 3819411 3820748 . - . ID=gene-PUW31_18590;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=PUW31_18590 CP118128.1 Protein Homology CDS 3819411 3820748 . - 0 ID=cds-WJH08131.1;Parent=gene-PUW31_18590;Dbxref=NCBI_GP:WJH08131.1;Name=WJH08131.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462702.1;locus_tag=PUW31_18590;product=D-serine transporter DsdX;protein_id=WJH08131.1;transl_table=11 CP118128.1 Genbank gene 3820974 3821897 . + . ID=gene-PUW31_18595;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=PUW31_18595 CP118128.1 Protein Homology CDS 3820974 3821897 . + 0 ID=cds-WJH10786.1;Parent=gene-PUW31_18595;Dbxref=NCBI_GP:WJH10786.1;Name=WJH10786.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=dsdC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462701.1;locus_tag=PUW31_18595;product=DNA-binding transcriptional regulator DsdC;protein_id=WJH10786.1;transl_table=11 CP118128.1 Genbank pseudogene 3821961 3823045 . + . ID=gene-PUW31_18600;Name=PUW31_18600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_18600;pseudo=true CP118128.1 Protein Homology CDS 3821961 3823045 . + 0 ID=cds-PUW31_18600;Parent=gene-PUW31_18600;Note=frameshifted;Ontology_term=GO:0071704,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462700.1;locus_tag=PUW31_18600;product=cellulase family glycosylhydrolase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3822972 3824156 . - . ID=gene-PUW31_18605;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=PUW31_18605 CP118128.1 Protein Homology CDS 3822972 3824156 . - 0 ID=cds-WJH08132.1;Parent=gene-PUW31_18605;Dbxref=NCBI_GP:WJH08132.1;Name=WJH08132.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462699.1;locus_tag=PUW31_18605;product=multidrug efflux MFS transporter EmrD;protein_id=WJH08132.1;transl_table=11 CP118128.1 Genbank gene 3824359 3825219 . - . ID=gene-PUW31_18610;Name=PUW31_18610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18610 CP118128.1 Protein Homology CDS 3824359 3825219 . - 0 ID=cds-WJH08133.1;Parent=gene-PUW31_18610;Dbxref=NCBI_GP:WJH08133.1;Name=WJH08133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462698.3;locus_tag=PUW31_18610;product=DMT family transporter;protein_id=WJH08133.1;transl_table=11 CP118128.1 Genbank gene 3825312 3825401 . - . ID=gene-PUW31_18615;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=PUW31_18615 CP118128.1 Protein Homology CDS 3825312 3825401 . - 0 ID=cds-WJH08134.1;Parent=gene-PUW31_18615;Dbxref=NCBI_GP:WJH08134.1;Name=WJH08134.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453107.1;locus_tag=PUW31_18615;product=type I toxin-antitoxin system toxin TisB;protein_id=WJH08134.1;transl_table=11 CP118128.1 Genbank pseudogene 3825398 3825512 . - . ID=gene-PUW31_18620;Name=PUW31_18620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_18620;pseudo=true CP118128.1 Protein Homology CDS 3825398 3825512 . - 0 ID=cds-PUW31_18620;Parent=gene-PUW31_18620;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009325922.1;locus_tag=PUW31_18620;product=hypothetical protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3826035 3826133 . + . ID=gene-PUW31_18625;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=PUW31_18625 CP118128.1 Protein Homology CDS 3826035 3826133 . + 0 ID=cds-WJH08135.1;Parent=gene-PUW31_18625;Dbxref=NCBI_GP:WJH08135.1;Name=WJH08135.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462696.1;locus_tag=PUW31_18625;product=ilvB operon leader peptide IvbL;protein_id=WJH08135.1;transl_table=11 CP118128.1 Genbank pseudogene 3826240 3827927 . + . ID=gene-PUW31_18630;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=pseudogene;locus_tag=PUW31_18630;pseudo=true CP118128.1 Protein Homology CDS 3826240 3827927 . + 0 ID=cds-PUW31_18630;Parent=gene-PUW31_18630;Note=frameshifted;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462695.1;locus_tag=PUW31_18630;product=acetolactate synthase large subunit;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3827931 3828221 . + . ID=gene-PUW31_18635;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=PUW31_18635 CP118128.1 Protein Homology CDS 3827931 3828221 . + 0 ID=cds-WJH08136.1;Parent=gene-PUW31_18635;Dbxref=NCBI_GP:WJH08136.1;Name=WJH08136.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462694.1;locus_tag=PUW31_18635;product=acetolactate synthase small subunit;protein_id=WJH08136.1;transl_table=11 CP118128.1 Genbank pseudogene 3828223 3829007 . - . ID=gene-PUW31_18640;Name=PUW31_18640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_18640;pseudo=true CP118128.1 Protein Homology CDS 3828223 3829007 . - 0 ID=cds-PUW31_18640;Parent=gene-PUW31_18640;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462693.1;locus_tag=PUW31_18640;product=DeoR family transcriptional regulator;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3829332 3830252 . + . ID=gene-PUW31_18645;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=PUW31_18645 CP118128.1 Protein Homology CDS 3829332 3830252 . + 0 ID=cds-WJH08137.1;Parent=gene-PUW31_18645;Dbxref=NCBI_GP:WJH08137.1;Name=WJH08137.1;Ontology_term=GO:0019303,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose catabolic process|0019303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462692.1;locus_tag=PUW31_18645;product=ribokinase;protein_id=WJH08137.1;transl_table=11 CP118128.1 Genbank gene 3830283 3831599 . + . ID=gene-PUW31_18650;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=PUW31_18650 CP118128.1 Protein Homology CDS 3830283 3831599 . + 0 ID=cds-WJH08138.1;Parent=gene-PUW31_18650;Dbxref=NCBI_GP:WJH08138.1;Name=WJH08138.1;Ontology_term=GO:0015756,GO:0015535,GO:0005886;gbkey=CDS;gene=fucP;go_component=plasma membrane|0005886||IEA;go_function=fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462691.1;locus_tag=PUW31_18650;product=L-fucose:H+ symporter permease;protein_id=WJH08138.1;transl_table=11 CP118128.1 Genbank gene 3831611 3832624 . + . ID=gene-PUW31_18655;Name=PUW31_18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18655 CP118128.1 Protein Homology CDS 3831611 3832624 . + 0 ID=cds-WJH08139.1;Parent=gene-PUW31_18655;Dbxref=NCBI_GP:WJH08139.1;Name=WJH08139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462690.1;locus_tag=PUW31_18655;product=aldose 1-epimerase family protein;protein_id=WJH08139.1;transl_table=11 CP118128.1 Genbank gene 3832778 3833368 . + . ID=gene-PUW31_18660;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=PUW31_18660 CP118128.1 Protein Homology CDS 3832778 3833368 . + 0 ID=cds-WJH08140.1;Parent=gene-PUW31_18660;Dbxref=NCBI_GP:WJH08140.1;Name=WJH08140.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462689.1;locus_tag=PUW31_18660;product=transcriptional regulator UhpA;protein_id=WJH08140.1;transl_table=11 CP118128.1 Genbank gene 3833368 3834870 . + . ID=gene-PUW31_18665;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=PUW31_18665 CP118128.1 Protein Homology CDS 3833368 3834870 . + 0 ID=cds-WJH08141.1;Parent=gene-PUW31_18665;Dbxref=NCBI_GP:WJH08141.1;Name=WJH08141.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462688.1;locus_tag=PUW31_18665;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WJH08141.1;transl_table=11 CP118128.1 Genbank pseudogene 3834880 3836207 . + . ID=gene-PUW31_18670;Name=PUW31_18670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_18670;pseudo=true CP118128.1 Protein Homology CDS 3834880 3836207 . + 0 ID=cds-PUW31_18670;Parent=gene-PUW31_18670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462687.1;locus_tag=PUW31_18670;product=MFS transporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3836350 3837729 . + . ID=gene-PUW31_18675;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=PUW31_18675 CP118128.1 Protein Homology CDS 3836350 3837729 . + 0 ID=cds-WJH08142.1;Parent=gene-PUW31_18675;Dbxref=NCBI_GP:WJH08142.1;Name=WJH08142.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462686.1;locus_tag=PUW31_18675;product=hexose-6-phosphate:phosphate antiporter;protein_id=WJH08142.1;transl_table=11 CP118128.1 Genbank gene 3837922 3838374 . + . ID=gene-PUW31_18680;Name=PUW31_18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18680 CP118128.1 Protein Homology CDS 3837922 3838374 . + 0 ID=cds-WJH08143.1;Parent=gene-PUW31_18680;Dbxref=NCBI_GP:WJH08143.1;Name=WJH08143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462685.1;locus_tag=PUW31_18680;product=DUF1198 domain-containing protein;protein_id=WJH08143.1;transl_table=11 CP118128.1 Genbank gene 3838807 3839130 . - . ID=gene-PUW31_18685;Name=PUW31_18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18685 CP118128.1 Protein Homology CDS 3838807 3839130 . - 0 ID=cds-WJH08144.1;Parent=gene-PUW31_18685;Dbxref=NCBI_GP:WJH08144.1;Name=WJH08144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462677.1;locus_tag=PUW31_18685;product=DNA-binding transcriptional regulator;protein_id=WJH08144.1;transl_table=11 CP118128.1 Genbank gene 3839114 3839473 . - . ID=gene-PUW31_18690;Name=PUW31_18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18690 CP118128.1 Protein Homology CDS 3839114 3839473 . - 0 ID=cds-WJH08145.1;Parent=gene-PUW31_18690;Dbxref=NCBI_GP:WJH08145.1;Name=WJH08145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462676.1;locus_tag=PUW31_18690;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WJH08145.1;transl_table=11 CP118128.1 Genbank gene 3839689 3840882 . + . ID=gene-PUW31_18695;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=PUW31_18695 CP118128.1 Protein Homology CDS 3839689 3840882 . + 0 ID=cds-WJH08146.1;Parent=gene-PUW31_18695;Dbxref=NCBI_GP:WJH08146.1;Name=WJH08146.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462675.1;locus_tag=PUW31_18695;product=purine ribonucleoside efflux pump NepI;protein_id=WJH08146.1;transl_table=11 CP118128.1 Genbank gene 3840942 3842324 . - . ID=gene-PUW31_18700;Name=PUW31_18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18700 CP118128.1 Protein Homology CDS 3840942 3842324 . - 0 ID=cds-WJH08147.1;Parent=gene-PUW31_18700;Dbxref=NCBI_GP:WJH08147.1;Name=WJH08147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462674.1;locus_tag=PUW31_18700;product=glycoside hydrolase family 1 protein;protein_id=WJH08147.1;transl_table=11 CP118128.1 Genbank gene 3842430 3842723 . - . ID=gene-PUW31_18705;Name=PUW31_18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18705 CP118128.1 Protein Homology CDS 3842430 3842723 . - 0 ID=cds-WJH08148.1;Parent=gene-PUW31_18705;Dbxref=NCBI_GP:WJH08148.1;Name=WJH08148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462673.1;locus_tag=PUW31_18705;product=hypothetical protein;protein_id=WJH08148.1;transl_table=11 CP118128.1 Genbank gene 3842920 3845718 . + . ID=gene-PUW31_18710;Name=dagR;gbkey=Gene;gene=dagR;gene_biotype=protein_coding;locus_tag=PUW31_18710 CP118128.1 Protein Homology CDS 3842920 3845718 . + 0 ID=cds-WJH08149.1;Parent=gene-PUW31_18710;Dbxref=NCBI_GP:WJH08149.1;Name=WJH08149.1;gbkey=CDS;gene=dagR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=PUW31_18710;product=transcriptional regulator DagR;protein_id=WJH08149.1;transl_table=11 CP118128.1 Genbank gene 3845937 3846362 . + . ID=gene-PUW31_18715;Name=PUW31_18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18715 CP118128.1 Protein Homology CDS 3845937 3846362 . + 0 ID=cds-WJH08150.1;Parent=gene-PUW31_18715;Dbxref=NCBI_GP:WJH08150.1;Name=WJH08150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462671.1;locus_tag=PUW31_18715;product=PTS sugar transporter subunit IIA;protein_id=WJH08150.1;transl_table=11 CP118128.1 Genbank gene 3846373 3846858 . + . ID=gene-PUW31_18720;Name=PUW31_18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18720 CP118128.1 Protein Homology CDS 3846373 3846858 . + 0 ID=cds-WJH08151.1;Parent=gene-PUW31_18720;Dbxref=NCBI_GP:WJH08151.1;Name=WJH08151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462670.1;locus_tag=PUW31_18720;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WJH08151.1;transl_table=11 CP118128.1 Genbank gene 3847004 3847753 . + . ID=gene-PUW31_18725;Name=PUW31_18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18725 CP118128.1 Protein Homology CDS 3847004 3847753 . + 0 ID=cds-WJH08152.1;Parent=gene-PUW31_18725;Dbxref=NCBI_GP:WJH08152.1;Name=WJH08152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462669.1;locus_tag=PUW31_18725;product=PTS sugar transporter subunit IIC;protein_id=WJH08152.1;transl_table=11 CP118128.1 Genbank gene 3847750 3848610 . + . ID=gene-PUW31_18730;Name=PUW31_18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18730 CP118128.1 Protein Homology CDS 3847750 3848610 . + 0 ID=cds-WJH08153.1;Parent=gene-PUW31_18730;Dbxref=NCBI_GP:WJH08153.1;Name=WJH08153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462668.3;locus_tag=PUW31_18730;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WJH08153.1;transl_table=11 CP118128.1 Genbank gene 3848614 3849723 . + . ID=gene-PUW31_18735;Name=dgaE;gbkey=Gene;gene=dgaE;gene_biotype=protein_coding;locus_tag=PUW31_18735 CP118128.1 Protein Homology CDS 3848614 3849723 . + 0 ID=cds-WJH08154.1;Parent=gene-PUW31_18735;Dbxref=NCBI_GP:WJH08154.1;Name=WJH08154.1;gbkey=CDS;gene=dgaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462667.1;locus_tag=PUW31_18735;product=D-glucosaminate-6-phosphate ammonia lyase;protein_id=WJH08154.1;transl_table=11 CP118128.1 Genbank gene 3849710 3850453 . + . ID=gene-PUW31_18740;Name=PUW31_18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18740 CP118128.1 Protein Homology CDS 3849710 3850453 . + 0 ID=cds-WJH08155.1;Parent=gene-PUW31_18740;Dbxref=NCBI_GP:WJH08155.1;Name=WJH08155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462666.1;locus_tag=PUW31_18740;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WJH08155.1;transl_table=11 CP118128.1 Genbank gene 3850689 3851630 . + . ID=gene-PUW31_18745;Name=PUW31_18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18745 CP118128.1 Protein Homology CDS 3850689 3851630 . + 0 ID=cds-WJH08156.1;Parent=gene-PUW31_18745;Dbxref=NCBI_GP:WJH08156.1;Name=WJH08156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462665.1;locus_tag=PUW31_18745;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WJH08156.1;transl_table=11 CP118128.1 Genbank pseudogene 3851673 3852567 . - . ID=gene-PUW31_18750;Name=PUW31_18750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_18750;pseudo=true CP118128.1 Protein Homology CDS 3851673 3852567 . - 0 ID=cds-PUW31_18750;Parent=gene-PUW31_18750;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462664.1;locus_tag=PUW31_18750;product=EamA family transporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3853079 3853774 . + . ID=gene-PUW31_18755;Name=PUW31_18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18755 CP118128.1 Protein Homology CDS 3853079 3853774 . + 0 ID=cds-WJH08157.1;Parent=gene-PUW31_18755;Dbxref=NCBI_GP:WJH08157.1;Name=WJH08157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462663.1;locus_tag=PUW31_18755;product=MgtC family protein;protein_id=WJH08157.1;transl_table=11 CP118128.1 Genbank gene 3853994 3856720 . + . ID=gene-PUW31_18760;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=PUW31_18760 CP118128.1 Protein Homology CDS 3853994 3856720 . + 0 ID=cds-WJH08158.1;Parent=gene-PUW31_18760;Dbxref=NCBI_GP:WJH08158.1;Name=WJH08158.1;Ontology_term=GO:0015693,GO:0015444;gbkey=CDS;gene=mgtA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462662.1;locus_tag=PUW31_18760;product=magnesium-translocating P-type ATPase;protein_id=WJH08158.1;transl_table=11 CP118128.1 Genbank gene 3856742 3856834 . + . ID=gene-PUW31_18765;Name=mgtR;gbkey=Gene;gene=mgtR;gene_biotype=protein_coding;locus_tag=PUW31_18765 CP118128.1 Protein Homology CDS 3856742 3856834 . + 0 ID=cds-WJH08159.1;Parent=gene-PUW31_18765;Dbxref=NCBI_GP:WJH08159.1;Name=WJH08159.1;gbkey=CDS;gene=mgtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082117.1;locus_tag=PUW31_18765;product=protein MgtR;protein_id=WJH08159.1;transl_table=11 CP118128.1 Genbank gene 3856847 3856933 . + . ID=gene-PUW31_18770;Name=mgtU;gbkey=Gene;gene=mgtU;gene_biotype=protein_coding;locus_tag=PUW31_18770 CP118128.1 Protein Homology CDS 3856847 3856933 . + 0 ID=cds-WJH10787.1;Parent=gene-PUW31_18770;Dbxref=NCBI_GP:WJH10787.1;Name=WJH10787.1;gbkey=CDS;gene=mgtU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_251009859.1;locus_tag=PUW31_18770;product=magnesium transporter protection protein MgtU;protein_id=WJH10787.1;transl_table=11 CP118128.1 Genbank gene 3857035 3857472 . + . ID=gene-PUW31_18775;Name=cigR;gbkey=Gene;gene=cigR;gene_biotype=protein_coding;locus_tag=PUW31_18775 CP118128.1 Protein Homology CDS 3857035 3857472 . + 0 ID=cds-WJH08160.1;Parent=gene-PUW31_18775;Dbxref=NCBI_GP:WJH08160.1;Name=WJH08160.1;gbkey=CDS;gene=cigR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210795.1;locus_tag=PUW31_18775;product=anti-virulence regulatory inner membrane protein CigR;protein_id=WJH08160.1;transl_table=11 CP118128.1 Genbank gene 3857640 3858320 . - . ID=gene-PUW31_18780;Name=PUW31_18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18780 CP118128.1 Protein Homology CDS 3857640 3858320 . - 0 ID=cds-WJH08161.1;Parent=gene-PUW31_18780;Dbxref=NCBI_GP:WJH08161.1;Name=WJH08161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462660.1;locus_tag=PUW31_18780;product=isochorismatase family protein;protein_id=WJH08161.1;transl_table=11 CP118128.1 Genbank pseudogene 3859104 3859960 . + . ID=gene-PUW31_18785;Name=PUW31_18785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_18785;pseudo=true CP118128.1 Protein Homology CDS 3859104 3859960 . + 0 ID=cds-PUW31_18785;Parent=gene-PUW31_18785;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462658.4;locus_tag=PUW31_18785;product=transcriptional regulator;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3859971 3860435 . + . ID=gene-PUW31_18790;Name=PUW31_18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18790 CP118128.1 Protein Homology CDS 3859971 3860435 . + 0 ID=cds-WJH10788.1;Parent=gene-PUW31_18790;Dbxref=NCBI_GP:WJH10788.1;Name=WJH10788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462657.1;locus_tag=PUW31_18790;product=hypothetical protein;protein_id=WJH10788.1;transl_table=11 CP118128.1 Genbank gene 3860530 3863397 . - . ID=gene-PUW31_18795;Name=misL;gbkey=Gene;gene=misL;gene_biotype=protein_coding;locus_tag=PUW31_18795 CP118128.1 Protein Homology CDS 3860530 3863397 . - 0 ID=cds-WJH08162.1;Parent=gene-PUW31_18795;Dbxref=NCBI_GP:WJH08162.1;Name=WJH08162.1;gbkey=CDS;gene=misL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462656.1;locus_tag=PUW31_18795;product=intestinal colonization autotransporter adhesin MisL;protein_id=WJH08162.1;transl_table=11 CP118128.1 Genbank gene 3863472 3864089 . - . ID=gene-PUW31_18800;Name=PUW31_18800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18800 CP118128.1 Protein Homology CDS 3863472 3864089 . - 0 ID=cds-WJH08163.1;Parent=gene-PUW31_18800;Dbxref=NCBI_GP:WJH08163.1;Name=WJH08163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462655.1;locus_tag=PUW31_18800;product=helix-turn-helix transcriptional regulator;protein_id=WJH08163.1;transl_table=11 CP118128.1 Genbank pseudogene 3865103 3865234 . + . ID=gene-PUW31_18805;Name=PUW31_18805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_18805;pseudo=true CP118128.1 Protein Homology CDS 3865103 3865234 . + 0 ID=cds-PUW31_18805;Parent=gene-PUW31_18805;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=PUW31_18805;product=transposase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3865388 3866425 . - . ID=gene-PUW31_18810;Name=PUW31_18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18810 CP118128.1 Protein Homology CDS 3865388 3866425 . - 0 ID=cds-WJH08164.1;Parent=gene-PUW31_18810;Dbxref=NCBI_GP:WJH08164.1;Name=WJH08164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462654.1;locus_tag=PUW31_18810;product=virulence RhuM family protein;protein_id=WJH08164.1;transl_table=11 CP118128.1 Genbank pseudogene 3866513 3866929 . - . ID=gene-PUW31_18815;Name=PUW31_18815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_18815;pseudo=true CP118128.1 Protein Homology CDS 3866513 3866929 . - 0 ID=cds-PUW31_18815;Parent=gene-PUW31_18815;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227719.1;locus_tag=PUW31_18815;product=DUF4942 domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 3866959 3868144 . - . ID=gene-PUW31_18820;Name=PUW31_18820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_18820;pseudo=true CP118128.1 Protein Homology CDS 3866959 3868144 . - 0 ID=cds-PUW31_18820;Parent=gene-PUW31_18820;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462652.1;locus_tag=PUW31_18820;product=AAA family ATPase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3868261 3868389 . - . ID=gene-PUW31_18825;Name=PUW31_18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18825 CP118128.1 Protein Homology CDS 3868261 3868389 . - 0 ID=cds-WJH10789.1;Parent=gene-PUW31_18825;Dbxref=NCBI_GP:WJH10789.1;Name=WJH10789.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018465.2;locus_tag=PUW31_18825;product=toxin;protein_id=WJH10789.1;transl_table=11 CP118128.1 Genbank gene 3868834 3869178 . + . ID=gene-PUW31_18830;Name=PUW31_18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18830 CP118128.1 Protein Homology CDS 3868834 3869178 . + 0 ID=cds-WJH08165.1;Parent=gene-PUW31_18830;Dbxref=NCBI_GP:WJH08165.1;Name=WJH08165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462651.1;locus_tag=PUW31_18830;product=hypothetical protein;protein_id=WJH08165.1;transl_table=11 CP118128.1 Genbank gene 3869495 3869589 . - . ID=gene-PUW31_18835;Name=PUW31_18835;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_18835 CP118128.1 tRNAscan-SE tRNA 3869495 3869589 . - . ID=rna-PUW31_18835;Parent=gene-PUW31_18835;anticodon=(pos:complement(3869553..3869555));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_18835;product=tRNA-Sec CP118128.1 tRNAscan-SE exon 3869495 3869589 . - . ID=exon-PUW31_18835-1;Parent=rna-PUW31_18835;anticodon=(pos:complement(3869553..3869555));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_18835;product=tRNA-Sec CP118128.1 Genbank pseudogene 3869876 3871257 . + . ID=gene-PUW31_18840;Name=PUW31_18840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_18840;pseudo=true CP118128.1 Protein Homology CDS 3869876 3871257 . + 0 ID=cds-PUW31_18840;Parent=gene-PUW31_18840;Note=frameshifted;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462650.1;locus_tag=PUW31_18840;product=glycoside-pentoside-hexuronide family transporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3871269 3873587 . + . ID=gene-PUW31_18845;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=PUW31_18845 CP118128.1 Protein Homology CDS 3871269 3873587 . + 0 ID=cds-WJH08166.1;Parent=gene-PUW31_18845;Dbxref=NCBI_GP:WJH08166.1;Name=WJH08166.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462649.1;locus_tag=PUW31_18845;product=alpha-xylosidase;protein_id=WJH08166.1;transl_table=11 CP118128.1 Genbank gene 3873690 3875399 . - . ID=gene-PUW31_18850;Name=PUW31_18850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18850 CP118128.1 Protein Homology CDS 3873690 3875399 . - 0 ID=cds-WJH08167.1;Parent=gene-PUW31_18850;Dbxref=NCBI_GP:WJH08167.1;Name=WJH08167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462648.1;locus_tag=PUW31_18850;product=AsmA family protein;protein_id=WJH08167.1;transl_table=11 CP118128.1 Genbank gene 3875520 3876911 . - . ID=gene-PUW31_18855;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=PUW31_18855 CP118128.1 Protein Homology CDS 3875520 3876911 . - 0 ID=cds-WJH08168.1;Parent=gene-PUW31_18855;Dbxref=NCBI_GP:WJH08168.1;Name=WJH08168.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462647.1;locus_tag=PUW31_18855;product=xanthine/proton symporter XanP;protein_id=WJH08168.1;transl_table=11 CP118128.1 Genbank gene 3877139 3878344 . + . ID=gene-PUW31_18860;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=PUW31_18860 CP118128.1 Protein Homology CDS 3877139 3878344 . + 0 ID=cds-WJH08169.1;Parent=gene-PUW31_18860;Dbxref=NCBI_GP:WJH08169.1;Name=WJH08169.1;Ontology_term=GO:0015813,GO:0015501;gbkey=CDS;gene=gltS;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507315.1;locus_tag=PUW31_18860;product=sodium/glutamate symporter;protein_id=WJH08169.1;transl_table=11 CP118128.1 Genbank gene 3878380 3880461 . - . ID=gene-PUW31_18865;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=PUW31_18865 CP118128.1 Protein Homology CDS 3878380 3880461 . - 0 ID=cds-WJH08170.1;Parent=gene-PUW31_18865;Dbxref=NCBI_GP:WJH08170.1;Name=WJH08170.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462644.1;locus_tag=PUW31_18865;product=ATP-dependent DNA helicase RecG;protein_id=WJH08170.1;transl_table=11 CP118128.1 Genbank gene 3880467 3881156 . - . ID=gene-PUW31_18870;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=PUW31_18870 CP118128.1 Protein Homology CDS 3880467 3881156 . - 0 ID=cds-WJH08171.1;Parent=gene-PUW31_18870;Dbxref=NCBI_GP:WJH08171.1;Name=WJH08171.1;Ontology_term=GO:0030488,GO:0008173,GO:0009020;gbkey=CDS;gene=trmH;go_function=RNA methyltransferase activity|0008173||IEA,tRNA (guanosine-2'-O-)-methyltransferase activity|0009020||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462643.1;locus_tag=PUW31_18870;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WJH08171.1;transl_table=11 CP118128.1 Genbank gene 3881161 3883272 . - . ID=gene-PUW31_18875;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=PUW31_18875 CP118128.1 Protein Homology CDS 3881161 3883272 . - 0 ID=cds-WJH08172.1;Parent=gene-PUW31_18875;Dbxref=NCBI_GP:WJH08172.1;Name=WJH08172.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462642.1;locus_tag=PUW31_18875;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WJH08172.1;transl_table=11 CP118128.1 Genbank gene 3883291 3883566 . - . ID=gene-PUW31_18880;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=PUW31_18880 CP118128.1 Protein Homology CDS 3883291 3883566 . - 0 ID=cds-WJH08173.1;Parent=gene-PUW31_18880;Dbxref=NCBI_GP:WJH08173.1;Name=WJH08173.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=PUW31_18880;product=DNA-directed RNA polymerase subunit omega;protein_id=WJH08173.1;transl_table=11 CP118128.1 Genbank pseudogene 3883621 3884243 . - . ID=gene-PUW31_18885;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=pseudogene;locus_tag=PUW31_18885;pseudo=true CP118128.1 Protein Homology CDS 3883621 3884243 . - 0 ID=cds-PUW31_18885;Parent=gene-PUW31_18885;Note=frameshifted;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=PUW31_18885;product=guanylate kinase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3884500 3886185 . + . ID=gene-PUW31_18890;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=PUW31_18890 CP118128.1 Protein Homology CDS 3884500 3886185 . + 0 ID=cds-WJH08174.1;Parent=gene-PUW31_18890;Dbxref=NCBI_GP:WJH08174.1;Name=WJH08174.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462639.1;locus_tag=PUW31_18890;product=NAD-dependent DNA ligase LigB;protein_id=WJH08174.1;transl_table=11 CP118128.1 Genbank gene 3886182 3886799 . - . ID=gene-PUW31_18895;Name=PUW31_18895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18895 CP118128.1 Protein Homology CDS 3886182 3886799 . - 0 ID=cds-WJH08175.1;Parent=gene-PUW31_18895;Dbxref=NCBI_GP:WJH08175.1;Name=WJH08175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462638.1;locus_tag=PUW31_18895;product=trimeric intracellular cation channel family protein;protein_id=WJH08175.1;transl_table=11 CP118128.1 Genbank gene 3887049 3887930 . - . ID=gene-PUW31_18900;Name=PUW31_18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18900 CP118128.1 Protein Homology CDS 3887049 3887930 . - 0 ID=cds-WJH08176.1;Parent=gene-PUW31_18900;Dbxref=NCBI_GP:WJH08176.1;Name=WJH08176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462637.1;locus_tag=PUW31_18900;product=HARLDQ motif MBL-fold protein;protein_id=WJH08176.1;transl_table=11 CP118128.1 Genbank gene 3888004 3888906 . + . ID=gene-PUW31_18905;Name=PUW31_18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18905 CP118128.1 Protein Homology CDS 3888004 3888906 . + 0 ID=cds-WJH08177.1;Parent=gene-PUW31_18905;Dbxref=NCBI_GP:WJH08177.1;Name=WJH08177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462636.1;locus_tag=PUW31_18905;product=LysR family transcriptional regulator;protein_id=WJH08177.1;transl_table=11 CP118128.1 Genbank gene 3888956 3889819 . - . ID=gene-PUW31_18910;Name=PUW31_18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18910 CP118128.1 Protein Homology CDS 3888956 3889819 . - 0 ID=cds-WJH08178.1;Parent=gene-PUW31_18910;Dbxref=NCBI_GP:WJH08178.1;Name=WJH08178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=PUW31_18910;product=YicC family protein;protein_id=WJH08178.1;transl_table=11 CP118128.1 Genbank gene 3889945 3890661 . + . ID=gene-PUW31_18915;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=PUW31_18915 CP118128.1 Protein Homology CDS 3889945 3890661 . + 0 ID=cds-WJH08179.1;Parent=gene-PUW31_18915;Dbxref=NCBI_GP:WJH08179.1;Name=WJH08179.1;Ontology_term=GO:0008033,GO:0004549;gbkey=CDS;gene=rph;go_function=tRNA-specific ribonuclease activity|0004549||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=PUW31_18915;product=ribonuclease PH;protein_id=WJH08179.1;transl_table=11 CP118128.1 Genbank gene 3890740 3891381 . + . ID=gene-PUW31_18920;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=PUW31_18920 CP118128.1 Protein Homology CDS 3890740 3891381 . + 0 ID=cds-WJH08180.1;Parent=gene-PUW31_18920;Dbxref=NCBI_GP:WJH08180.1;Name=WJH08180.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462633.1;locus_tag=PUW31_18920;product=orotate phosphoribosyltransferase;protein_id=WJH08180.1;transl_table=11 CP118128.1 Genbank gene 3891459 3892055 . - . ID=gene-PUW31_18925;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=PUW31_18925 CP118128.1 Protein Homology CDS 3891459 3892055 . - 0 ID=cds-WJH08181.1;Parent=gene-PUW31_18925;Dbxref=NCBI_GP:WJH08181.1;Name=WJH08181.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=PUW31_18925;product=nucleoid occlusion factor SlmA;protein_id=WJH08181.1;transl_table=11 CP118128.1 Genbank gene 3892163 3892621 . - . ID=gene-PUW31_18930;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=PUW31_18930 CP118128.1 Protein Homology CDS 3892163 3892621 . - 0 ID=cds-WJH08182.1;Parent=gene-PUW31_18930;Dbxref=NCBI_GP:WJH08182.1;Name=WJH08182.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=PUW31_18930;product=dUTP diphosphatase;protein_id=WJH08182.1;transl_table=11 CP118128.1 Genbank gene 3892599 3893819 . - . ID=gene-PUW31_18935;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=PUW31_18935 CP118128.1 Protein Homology CDS 3892599 3893819 . - 0 ID=cds-WJH10790.1;Parent=gene-PUW31_18935;Dbxref=NCBI_GP:WJH10790.1;Name=WJH10790.1;Ontology_term=GO:0015937,GO:0015939,GO:0004632,GO:0004633;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate metabolic process|0015939||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=PUW31_18935;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WJH10790.1;transl_table=11 CP118128.1 Genbank gene 3893995 3894660 . + . ID=gene-PUW31_18940;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=PUW31_18940 CP118128.1 Protein Homology CDS 3893995 3894660 . + 0 ID=cds-WJH08183.1;Parent=gene-PUW31_18940;Dbxref=NCBI_GP:WJH08183.1;Name=WJH08183.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462629.1;locus_tag=PUW31_18940;product=DNA repair protein RadC;protein_id=WJH08183.1;transl_table=11 CP118128.1 Genbank gene 3894878 3895114 . + . ID=gene-PUW31_18945;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=PUW31_18945 CP118128.1 Protein Homology CDS 3894878 3895114 . + 0 ID=cds-WJH08184.1;Parent=gene-PUW31_18945;Dbxref=NCBI_GP:WJH08184.1;Name=WJH08184.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=PUW31_18945;product=50S ribosomal protein L28;protein_id=WJH08184.1;transl_table=11 CP118128.1 Genbank gene 3895135 3895302 . + . ID=gene-PUW31_18950;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=PUW31_18950 CP118128.1 Protein Homology CDS 3895135 3895302 . + 0 ID=cds-WJH08185.1;Parent=gene-PUW31_18950;Dbxref=NCBI_GP:WJH08185.1;Name=WJH08185.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=PUW31_18950;product=50S ribosomal protein L33;protein_id=WJH08185.1;transl_table=11 CP118128.1 Genbank gene 3895400 3896209 . + . ID=gene-PUW31_18955;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=PUW31_18955 CP118128.1 Protein Homology CDS 3895400 3896209 . + 0 ID=cds-WJH08186.1;Parent=gene-PUW31_18955;Dbxref=NCBI_GP:WJH08186.1;Name=WJH08186.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462626.1;locus_tag=PUW31_18955;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WJH08186.1;transl_table=11 CP118128.1 Genbank gene 3896237 3896716 . - . ID=gene-PUW31_18960;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=PUW31_18960 CP118128.1 Protein Homology CDS 3896237 3896716 . - 0 ID=cds-WJH08187.1;Parent=gene-PUW31_18960;Dbxref=NCBI_GP:WJH08187.1;Name=WJH08187.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462625.1;locus_tag=PUW31_18960;product=pantetheine-phosphate adenylyltransferase;protein_id=WJH08187.1;transl_table=11 CP118128.1 Genbank gene 3896725 3898002 . - . ID=gene-PUW31_18965;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=PUW31_18965 CP118128.1 Protein Homology CDS 3896725 3898002 . - 0 ID=cds-WJH08188.1;Parent=gene-PUW31_18965;Dbxref=NCBI_GP:WJH08188.1;Name=WJH08188.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462624.1;locus_tag=PUW31_18965;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WJH08188.1;transl_table=11 CP118128.1 Genbank gene 3898411 3899481 . + . ID=gene-PUW31_18970;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=PUW31_18970 CP118128.1 Protein Homology CDS 3898411 3899481 . + 0 ID=cds-WJH08189.1;Parent=gene-PUW31_18970;Dbxref=NCBI_GP:WJH08189.1;Name=WJH08189.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521713.1;locus_tag=PUW31_18970;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WJH08189.1;transl_table=11 CP118128.1 Genbank gene 3899478 3900602 . + . ID=gene-PUW31_18975;Name=PUW31_18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18975 CP118128.1 Protein Homology CDS 3899478 3900602 . + 0 ID=cds-WJH08190.1;Parent=gene-PUW31_18975;Dbxref=NCBI_GP:WJH08190.1;Name=WJH08190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462622.1;locus_tag=PUW31_18975;product=glycosyltransferase family 4 protein;protein_id=WJH08190.1;transl_table=11 CP118128.1 Genbank gene 3900595 3901392 . + . ID=gene-PUW31_18980;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=PUW31_18980 CP118128.1 Protein Homology CDS 3900595 3901392 . + 0 ID=cds-WJH08191.1;Parent=gene-PUW31_18980;Dbxref=NCBI_GP:WJH08191.1;Name=WJH08191.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462621.1;locus_tag=PUW31_18980;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WJH08191.1;transl_table=11 CP118128.1 Genbank gene 3901448 3901657 . + . ID=gene-PUW31_18985;Name=PUW31_18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_18985 CP118128.1 GeneMarkS-2+ CDS 3901448 3901657 . + 0 ID=cds-WJH08192.1;Parent=gene-PUW31_18985;Dbxref=NCBI_GP:WJH08192.1;Name=WJH08192.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_18985;product=hypothetical protein;protein_id=WJH08192.1;transl_table=11 CP118128.1 Genbank gene 3901727 3902806 . + . ID=gene-PUW31_18990;Name=waaB;gbkey=Gene;gene=waaB;gene_biotype=protein_coding;gene_synonym=rfaB;locus_tag=PUW31_18990 CP118128.1 Protein Homology CDS 3901727 3902806 . + 0 ID=cds-WJH08193.1;Parent=gene-PUW31_18990;Dbxref=NCBI_GP:WJH08193.1;Name=WJH08193.1;gbkey=CDS;gene=waaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462619.1;locus_tag=PUW31_18990;product=lipopolysaccharide 1%2C6-galactosyltransferase;protein_id=WJH08193.1;transl_table=11 CP118128.1 Genbank gene 3902812 3903825 . + . ID=gene-PUW31_18995;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=PUW31_18995 CP118128.1 Protein Homology CDS 3902812 3903825 . + 0 ID=cds-WJH08194.1;Parent=gene-PUW31_18995;Dbxref=NCBI_GP:WJH08194.1;Name=WJH08194.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462618.1;locus_tag=PUW31_18995;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WJH08194.1;transl_table=11 CP118128.1 Genbank gene 3903861 3904856 . + . ID=gene-PUW31_19000;Name=rfaJ;gbkey=Gene;gene=rfaJ;gene_biotype=protein_coding;locus_tag=PUW31_19000 CP118128.1 Protein Homology CDS 3903861 3904856 . + 0 ID=cds-WJH10791.1;Parent=gene-PUW31_19000;Dbxref=NCBI_GP:WJH10791.1;Name=WJH10791.1;gbkey=CDS;gene=rfaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462617.1;locus_tag=PUW31_19000;product=lipopolysaccharide 1%2C2-glucosyltransferase RfaJ;protein_id=WJH10791.1;transl_table=11 CP118128.1 Genbank gene 3904879 3905577 . + . ID=gene-PUW31_19005;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=PUW31_19005 CP118128.1 Protein Homology CDS 3904879 3905577 . + 0 ID=cds-WJH08195.1;Parent=gene-PUW31_19005;Dbxref=NCBI_GP:WJH08195.1;Name=WJH08195.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462616.1;locus_tag=PUW31_19005;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WJH08195.1;transl_table=11 CP118128.1 Genbank pseudogene 3905727 3906535 . + . ID=gene-PUW31_19010;Name=waaZ;gbkey=Gene;gene=waaZ;gene_biotype=pseudogene;locus_tag=PUW31_19010;pseudo=true CP118128.1 Protein Homology CDS 3905727 3906535 . + 0 ID=cds-PUW31_19010;Parent=gene-PUW31_19010;Note=frameshifted;gbkey=CDS;gene=waaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462615.1;locus_tag=PUW31_19010;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3906635 3907780 . + . ID=gene-PUW31_19015;Name=PUW31_19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19015 CP118128.1 Protein Homology CDS 3906635 3907780 . + 0 ID=cds-WJH08196.1;Parent=gene-PUW31_19015;Dbxref=NCBI_GP:WJH08196.1;Name=WJH08196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462614.1;locus_tag=PUW31_19015;product=lipopolysaccharide N-acetylglucosaminyltransferase;protein_id=WJH08196.1;transl_table=11 CP118128.1 Genbank gene 3907838 3909052 . - . ID=gene-PUW31_19020;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=protein_coding;locus_tag=PUW31_19020 CP118128.1 Protein Homology CDS 3907838 3909052 . - 0 ID=cds-WJH08197.1;Parent=gene-PUW31_19020;Dbxref=NCBI_GP:WJH08197.1;Name=WJH08197.1;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462613.1;locus_tag=PUW31_19020;product=O-antigen ligase RfaL;protein_id=WJH08197.1;transl_table=11 CP118128.1 Genbank gene 3909092 3910045 . - . ID=gene-PUW31_19025;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=PUW31_19025 CP118128.1 Protein Homology CDS 3909092 3910045 . - 0 ID=cds-WJH08198.1;Parent=gene-PUW31_19025;Dbxref=NCBI_GP:WJH08198.1;Name=WJH08198.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462612.1;locus_tag=PUW31_19025;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WJH08198.1;transl_table=11 CP118128.1 Genbank gene 3910045 3911091 . - . ID=gene-PUW31_19030;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=PUW31_19030 CP118128.1 Protein Homology CDS 3910045 3911091 . - 0 ID=cds-WJH08199.1;Parent=gene-PUW31_19030;Dbxref=NCBI_GP:WJH08199.1;Name=WJH08199.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462611.1;locus_tag=PUW31_19030;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WJH08199.1;transl_table=11 CP118128.1 Genbank gene 3911094 3912026 . - . ID=gene-PUW31_19035;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=PUW31_19035 CP118128.1 Protein Homology CDS 3911094 3912026 . - 0 ID=cds-WJH08200.1;Parent=gene-PUW31_19035;Dbxref=NCBI_GP:WJH08200.1;Name=WJH08200.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=PUW31_19035;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WJH08200.1;transl_table=11 CP118128.1 Genbank pseudogene 3912229 3913424 . + . ID=gene-PUW31_19040;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=pseudogene;locus_tag=PUW31_19040;pseudo=true CP118128.1 Protein Homology CDS 3912229 3913424 . + 0 ID=cds-PUW31_19040;Parent=gene-PUW31_19040;Note=frameshifted;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=PUW31_19040;product=glycine C-acetyltransferase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 3913434 3914458 . + . ID=gene-PUW31_19045;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=pseudogene;locus_tag=PUW31_19045;pseudo=true CP118128.1 Protein Homology CDS 3913434 3914458 . + 0 ID=cds-PUW31_19045;Parent=gene-PUW31_19045;Note=frameshifted;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=PUW31_19045;product=L-threonine 3-dehydrogenase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3914752 3915786 . + . ID=gene-PUW31_19050;Name=PUW31_19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19050 CP118128.1 Protein Homology CDS 3914752 3915786 . + 0 ID=cds-WJH08201.1;Parent=gene-PUW31_19050;Dbxref=NCBI_GP:WJH08201.1;Name=WJH08201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462607.1;locus_tag=PUW31_19050;product=glycosyltransferase;protein_id=WJH08201.1;transl_table=11 CP118128.1 Genbank gene 3915773 3916735 . - . ID=gene-PUW31_19055;Name=PUW31_19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19055 CP118128.1 Protein Homology CDS 3915773 3916735 . - 0 ID=cds-WJH08202.1;Parent=gene-PUW31_19055;Dbxref=NCBI_GP:WJH08202.1;Name=WJH08202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462606.1;locus_tag=PUW31_19055;product=divergent polysaccharide deacetylase family protein;protein_id=WJH08202.1;transl_table=11 CP118128.1 Genbank gene 3916739 3917998 . - . ID=gene-PUW31_19060;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=PUW31_19060 CP118128.1 Protein Homology CDS 3916739 3917998 . - 0 ID=cds-WJH10792.1;Parent=gene-PUW31_19060;Dbxref=NCBI_GP:WJH10792.1;Name=WJH10792.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=PUW31_19060;product=murein hydrolase activator EnvC;protein_id=WJH10792.1;transl_table=11 CP118128.1 Genbank gene 3918032 3919576 . - . ID=gene-PUW31_19065;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=PUW31_19065 CP118128.1 Protein Homology CDS 3918032 3919576 . - 0 ID=cds-WJH08203.1;Parent=gene-PUW31_19065;Dbxref=NCBI_GP:WJH08203.1;Name=WJH08203.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462604.1;locus_tag=PUW31_19065;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WJH08203.1;transl_table=11 CP118128.1 Genbank gene 3919823 3920254 . + . ID=gene-PUW31_19070;Name=PUW31_19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19070 CP118128.1 Protein Homology CDS 3919823 3920254 . + 0 ID=cds-WJH08204.1;Parent=gene-PUW31_19070;Dbxref=NCBI_GP:WJH08204.1;Name=WJH08204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462603.1;locus_tag=PUW31_19070;product=rhodanese-like domain-containing protein;protein_id=WJH08204.1;transl_table=11 CP118128.1 Genbank gene 3920341 3920592 . + . ID=gene-PUW31_19075;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=PUW31_19075 CP118128.1 Protein Homology CDS 3920341 3920592 . + 0 ID=cds-WJH08205.1;Parent=gene-PUW31_19075;Dbxref=NCBI_GP:WJH08205.1;Name=WJH08205.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462602.1;locus_tag=PUW31_19075;product=glutaredoxin 3;protein_id=WJH08205.1;transl_table=11 CP118128.1 Genbank gene 3920636 3921103 . + . ID=gene-PUW31_19080;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=PUW31_19080 CP118128.1 Protein Homology CDS 3920636 3921103 . + 0 ID=cds-WJH08206.1;Parent=gene-PUW31_19080;Dbxref=NCBI_GP:WJH08206.1;Name=WJH08206.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=PUW31_19080;product=protein-export chaperone SecB;protein_id=WJH08206.1;transl_table=11 CP118128.1 Genbank gene 3921103 3922122 . + . ID=gene-PUW31_19085;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=PUW31_19085 CP118128.1 Protein Homology CDS 3921103 3922122 . + 0 ID=cds-WJH08207.1;Parent=gene-PUW31_19085;Dbxref=NCBI_GP:WJH08207.1;Name=WJH08207.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462600.1;locus_tag=PUW31_19085;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WJH08207.1;transl_table=11 CP118128.1 Genbank gene 3922200 3923021 . + . ID=gene-PUW31_19090;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=PUW31_19090 CP118128.1 Protein Homology CDS 3922200 3923021 . + 0 ID=cds-WJH08208.1;Parent=gene-PUW31_19090;Dbxref=NCBI_GP:WJH08208.1;Name=WJH08208.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=PUW31_19090;product=serine O-acetyltransferase;protein_id=WJH08208.1;transl_table=11 CP118128.1 Genbank gene 3923104 3924414 . - . ID=gene-PUW31_19095;Name=PUW31_19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19095 CP118128.1 Protein Homology CDS 3923104 3924414 . - 0 ID=cds-WJH08209.1;Parent=gene-PUW31_19095;Dbxref=NCBI_GP:WJH08209.1;Name=WJH08209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462598.1;locus_tag=PUW31_19095;product=MFS transporter;protein_id=WJH08209.1;transl_table=11 CP118128.1 Genbank gene 3924488 3925684 . - . ID=gene-PUW31_19100;Name=PUW31_19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19100 CP118128.1 Protein Homology CDS 3924488 3925684 . - 0 ID=cds-WJH08210.1;Parent=gene-PUW31_19100;Dbxref=NCBI_GP:WJH08210.1;Name=WJH08210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462597.1;locus_tag=PUW31_19100;product=L-talarate/galactarate dehydratase;protein_id=WJH08210.1;transl_table=11 CP118128.1 Genbank gene 3926003 3927007 . + . ID=gene-PUW31_19105;Name=PUW31_19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19105 CP118128.1 Protein Homology CDS 3926003 3927007 . + 0 ID=cds-WJH08211.1;Parent=gene-PUW31_19105;Dbxref=NCBI_GP:WJH08211.1;Name=WJH08211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462596.1;locus_tag=PUW31_19105;product=LacI family DNA-binding transcriptional regulator;protein_id=WJH08211.1;transl_table=11 CP118128.1 Genbank gene 3927075 3927548 . - . ID=gene-PUW31_19110;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=PUW31_19110 CP118128.1 Protein Homology CDS 3927075 3927548 . - 0 ID=cds-WJH08212.1;Parent=gene-PUW31_19110;Dbxref=NCBI_GP:WJH08212.1;Name=WJH08212.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=PUW31_19110;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WJH08212.1;transl_table=11 CP118128.1 Genbank gene 3927614 3928804 . - . ID=gene-PUW31_19115;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=PUW31_19115 CP118128.1 Protein Homology CDS 3927614 3928804 . - 0 ID=cds-WJH08213.1;Parent=gene-PUW31_19115;Dbxref=NCBI_GP:WJH08213.1;Name=WJH08213.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462594.1;locus_tag=PUW31_19115;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=WJH08213.1;transl_table=11 CP118128.1 Genbank gene 3928801 3929577 . - . ID=gene-PUW31_19120;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=PUW31_19120 CP118128.1 Protein Homology CDS 3928801 3929577 . - 0 ID=cds-WJH08214.1;Parent=gene-PUW31_19120;Dbxref=NCBI_GP:WJH08214.1;Name=WJH08214.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462593.1;locus_tag=PUW31_19120;product=transcriptional regulator LldR;protein_id=WJH08214.1;transl_table=11 CP118128.1 Genbank pseudogene 3929574 3931230 . - . ID=gene-PUW31_19125;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=pseudogene;locus_tag=PUW31_19125;pseudo=true CP118128.1 Protein Homology CDS 3929574 3931230 . - 0 ID=cds-PUW31_19125;Parent=gene-PUW31_19125;Note=frameshifted;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462592.1;locus_tag=PUW31_19125;product=L-lactate permease;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3931529 3935785 . - . ID=gene-PUW31_19130;Name=sadA;gbkey=Gene;gene=sadA;gene_biotype=protein_coding;locus_tag=PUW31_19130 CP118128.1 Protein Homology CDS 3931529 3935785 . - 0 ID=cds-WJH08215.1;Parent=gene-PUW31_19130;Dbxref=NCBI_GP:WJH08215.1;Name=WJH08215.1;gbkey=CDS;gene=sadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462591.1;locus_tag=PUW31_19130;product=trimeric autotransporter adhesin SadA;protein_id=WJH08215.1;transl_table=11 CP118128.1 Genbank gene 3935829 3936512 . - . ID=gene-PUW31_19135;Name=PUW31_19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19135 CP118128.1 Protein Homology CDS 3935829 3936512 . - 0 ID=cds-WJH08216.1;Parent=gene-PUW31_19135;Dbxref=NCBI_GP:WJH08216.1;Name=WJH08216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462590.1;locus_tag=PUW31_19135;product=DUF3251 domain-containing protein;protein_id=WJH08216.1;transl_table=11 CP118128.1 Genbank gene 3937000 3937362 . - . ID=gene-PUW31_19140;Name=PUW31_19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19140 CP118128.1 Protein Homology CDS 3937000 3937362 . - 0 ID=cds-WJH08217.1;Parent=gene-PUW31_19140;Dbxref=NCBI_GP:WJH08217.1;Name=WJH08217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462589.1;locus_tag=PUW31_19140;product=YibL family ribosome-associated protein;protein_id=WJH08217.1;transl_table=11 CP118128.1 Genbank gene 3937653 3937862 . + . ID=gene-PUW31_19145;Name=PUW31_19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19145 CP118128.1 Protein Homology CDS 3937653 3937862 . + 0 ID=cds-WJH08218.1;Parent=gene-PUW31_19145;Dbxref=NCBI_GP:WJH08218.1;Name=WJH08218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462588.1;locus_tag=PUW31_19145;product=hypothetical protein;protein_id=WJH08218.1;transl_table=11 CP118128.1 Genbank gene 3937872 3938462 . - . ID=gene-PUW31_19150;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=PUW31_19150 CP118128.1 Protein Homology CDS 3937872 3938462 . - 0 ID=cds-WJH08219.1;Parent=gene-PUW31_19150;Dbxref=NCBI_GP:WJH08219.1;Name=WJH08219.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462587.1;locus_tag=PUW31_19150;product=mannitol operon repressor MtlR;protein_id=WJH08219.1;transl_table=11 CP118128.1 Genbank gene 3938459 3939607 . - . ID=gene-PUW31_19155;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=PUW31_19155 CP118128.1 Protein Homology CDS 3938459 3939607 . - 0 ID=cds-WJH08220.1;Parent=gene-PUW31_19155;Dbxref=NCBI_GP:WJH08220.1;Name=WJH08220.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462586.1;locus_tag=PUW31_19155;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WJH08220.1;transl_table=11 CP118128.1 Genbank gene 3939828 3941744 . - . ID=gene-PUW31_19160;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=PUW31_19160 CP118128.1 Protein Homology CDS 3939828 3941744 . - 0 ID=cds-WJH08221.1;Parent=gene-PUW31_19160;Dbxref=NCBI_GP:WJH08221.1;Name=WJH08221.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462585.1;locus_tag=PUW31_19160;product=PTS mannitol transporter subunit IICBA;protein_id=WJH08221.1;transl_table=11 CP118128.1 Genbank gene 3942220 3942828 . + . ID=gene-PUW31_19165;Name=PUW31_19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19165 CP118128.1 Protein Homology CDS 3942220 3942828 . + 0 ID=cds-WJH08222.1;Parent=gene-PUW31_19165;Dbxref=NCBI_GP:WJH08222.1;Name=WJH08222.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462584.1;locus_tag=PUW31_19165;product=glutathione S-transferase;protein_id=WJH08222.1;transl_table=11 CP118128.1 Genbank gene 3942927 3944318 . + . ID=gene-PUW31_19170;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=PUW31_19170 CP118128.1 Protein Homology CDS 3942927 3944318 . + 0 ID=cds-WJH08223.1;Parent=gene-PUW31_19170;Dbxref=NCBI_GP:WJH08223.1;Name=WJH08223.1;Ontology_term=GO:0016260,GO:0004125;gbkey=CDS;gene=selA;go_function=L-seryl-tRNASec selenium transferase activity|0004125||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462583.1;locus_tag=PUW31_19170;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WJH08223.1;transl_table=11 CP118128.1 Genbank gene 3944315 3946165 . + . ID=gene-PUW31_19175;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=PUW31_19175 CP118128.1 Protein Homology CDS 3944315 3946165 . + 0 ID=cds-WJH08224.1;Parent=gene-PUW31_19175;Dbxref=NCBI_GP:WJH08224.1;Name=WJH08224.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525;gbkey=CDS;gene=selB;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462582.1;locus_tag=PUW31_19175;product=selenocysteine-specific translation elongation factor;protein_id=WJH08224.1;transl_table=11 CP118128.1 Genbank gene 3946413 3947294 . - . ID=gene-PUW31_19180;Name=PUW31_19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19180 CP118128.1 Protein Homology CDS 3946413 3947294 . - 0 ID=cds-WJH08225.1;Parent=gene-PUW31_19180;Dbxref=NCBI_GP:WJH08225.1;Name=WJH08225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954677.1;locus_tag=PUW31_19180;product=ROK family protein;protein_id=WJH08225.1;transl_table=11 CP118128.1 Genbank pseudogene 3947463 3949000 . + . ID=gene-PUW31_19185;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=pseudogene;locus_tag=PUW31_19185;pseudo=true CP118128.1 Protein Homology CDS 3947463 3949000 . + 0 ID=cds-PUW31_19185;Parent=gene-PUW31_19185;Note=frameshifted;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462580.1;locus_tag=PUW31_19185;product=aldehyde dehydrogenase AldB;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3949118 3951073 . - . ID=gene-PUW31_19190;Name=PUW31_19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19190 CP118128.1 Protein Homology CDS 3949118 3951073 . - 0 ID=cds-WJH08226.1;Parent=gene-PUW31_19190;Dbxref=NCBI_GP:WJH08226.1;Name=WJH08226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462579.1;locus_tag=PUW31_19190;product=glycoside hydrolase family 127 protein;protein_id=WJH08226.1;transl_table=11 CP118128.1 Genbank gene 3951337 3952152 . + . ID=gene-PUW31_19195;Name=PUW31_19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19195 CP118128.1 Protein Homology CDS 3951337 3952152 . + 0 ID=cds-WJH08227.1;Parent=gene-PUW31_19195;Dbxref=NCBI_GP:WJH08227.1;Name=WJH08227.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462578.1;locus_tag=PUW31_19195;product=helix-turn-helix domain-containing protein;protein_id=WJH08227.1;transl_table=11 CP118128.1 Genbank gene 3952313 3953008 . - . ID=gene-PUW31_19200;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=PUW31_19200 CP118128.1 Protein Homology CDS 3952313 3953008 . - 0 ID=cds-WJH08228.1;Parent=gene-PUW31_19200;Dbxref=NCBI_GP:WJH08228.1;Name=WJH08228.1;Ontology_term=GO:0019568,GO:0008742;gbkey=CDS;gene=araD;go_function=L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462577.1;locus_tag=PUW31_19200;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WJH08228.1;transl_table=11 CP118128.1 Genbank gene 3953002 3953862 . - . ID=gene-PUW31_19205;Name=PUW31_19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19205 CP118128.1 Protein Homology CDS 3953002 3953862 . - 0 ID=cds-WJH08229.1;Parent=gene-PUW31_19205;Dbxref=NCBI_GP:WJH08229.1;Name=WJH08229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462576.1;locus_tag=PUW31_19205;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WJH08229.1;transl_table=11 CP118128.1 Genbank gene 3953855 3954517 . - . ID=gene-PUW31_19210;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=PUW31_19210 CP118128.1 Protein Homology CDS 3953855 3954517 . - 0 ID=cds-WJH08230.1;Parent=gene-PUW31_19210;Dbxref=NCBI_GP:WJH08230.1;Name=WJH08230.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462575.1;locus_tag=PUW31_19210;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WJH08230.1;transl_table=11 CP118128.1 Genbank pseudogene 3954514 3956008 . - . ID=gene-PUW31_19215;Name=PUW31_19215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_19215;pseudo=true CP118128.1 Protein Homology CDS 3954514 3956008 . - 0 ID=cds-PUW31_19215;Parent=gene-PUW31_19215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462574.1;locus_tag=PUW31_19215;product=carbohydrate kinase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3956012 3956998 . - . ID=gene-PUW31_19220;Name=PUW31_19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19220 CP118128.1 Protein Homology CDS 3956012 3956998 . - 0 ID=cds-WJH08231.1;Parent=gene-PUW31_19220;Dbxref=NCBI_GP:WJH08231.1;Name=WJH08231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462573.1;locus_tag=PUW31_19220;product=TRAP transporter substrate-binding protein;protein_id=WJH08231.1;transl_table=11 CP118128.1 Genbank gene 3957010 3958287 . - . ID=gene-PUW31_19225;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=PUW31_19225 CP118128.1 Protein Homology CDS 3957010 3958287 . - 0 ID=cds-WJH08232.1;Parent=gene-PUW31_19225;Dbxref=NCBI_GP:WJH08232.1;Name=WJH08232.1;gbkey=CDS;gene=yiaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462572.1;locus_tag=PUW31_19225;product=2%2C3-diketo-L-gulonate transporter large permease YiaN;protein_id=WJH08232.1;transl_table=11 CP118128.1 Genbank gene 3958290 3958763 . - . ID=gene-PUW31_19230;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=PUW31_19230 CP118128.1 Protein Homology CDS 3958290 3958763 . - 0 ID=cds-WJH08233.1;Parent=gene-PUW31_19230;Dbxref=NCBI_GP:WJH08233.1;Name=WJH08233.1;gbkey=CDS;gene=yiaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462571.1;locus_tag=PUW31_19230;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=WJH08233.1;transl_table=11 CP118128.1 Genbank gene 3958902 3959834 . - . ID=gene-PUW31_19235;Name=PUW31_19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19235 CP118128.1 Protein Homology CDS 3958902 3959834 . - 0 ID=cds-WJH08234.1;Parent=gene-PUW31_19235;Dbxref=NCBI_GP:WJH08234.1;Name=WJH08234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462570.1;locus_tag=PUW31_19235;product=DUF4862 family protein;protein_id=WJH08234.1;transl_table=11 CP118128.1 Genbank gene 3959858 3960322 . - . ID=gene-PUW31_19240;Name=PUW31_19240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19240 CP118128.1 Protein Homology CDS 3959858 3960322 . - 0 ID=cds-WJH08235.1;Parent=gene-PUW31_19240;Dbxref=NCBI_GP:WJH08235.1;Name=WJH08235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462569.1;locus_tag=PUW31_19240;product=YhcH/YjgK/YiaL family protein;protein_id=WJH08235.1;transl_table=11 CP118128.1 Genbank gene 3960334 3961326 . - . ID=gene-PUW31_19245;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=PUW31_19245 CP118128.1 Protein Homology CDS 3960334 3961326 . - 0 ID=cds-WJH08236.1;Parent=gene-PUW31_19245;Dbxref=NCBI_GP:WJH08236.1;Name=WJH08236.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462568.1;locus_tag=PUW31_19245;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WJH08236.1;transl_table=11 CP118128.1 Genbank gene 3961556 3962356 . + . ID=gene-PUW31_19250;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=PUW31_19250 CP118128.1 Protein Homology CDS 3961556 3962356 . + 0 ID=cds-WJH08237.1;Parent=gene-PUW31_19250;Dbxref=NCBI_GP:WJH08237.1;Name=WJH08237.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462567.1;locus_tag=PUW31_19250;product=IclR family transcriptional regulator YiaJ;protein_id=WJH08237.1;transl_table=11 CP118128.1 Genbank gene 3962473 3962946 . + . ID=gene-PUW31_19255;Name=PUW31_19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19255 CP118128.1 Protein Homology CDS 3962473 3962946 . + 0 ID=cds-WJH08238.1;Parent=gene-PUW31_19255;Dbxref=NCBI_GP:WJH08238.1;Name=WJH08238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462566.1;locus_tag=PUW31_19255;product=4Fe-4S dicluster domain-containing protein;protein_id=WJH08238.1;transl_table=11 CP118128.1 Genbank gene 3962983 3964233 . - . ID=gene-PUW31_19260;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=PUW31_19260 CP118128.1 Protein Homology CDS 3962983 3964233 . - 0 ID=cds-WJH08239.1;Parent=gene-PUW31_19260;Dbxref=NCBI_GP:WJH08239.1;Name=WJH08239.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462565.1;locus_tag=PUW31_19260;product=valine--pyruvate transaminase;protein_id=WJH08239.1;transl_table=11 CP118128.1 Genbank pseudogene 3964407 3966418 . - . ID=gene-PUW31_19265;Name=PUW31_19265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_19265;pseudo=true CP118128.1 Protein Homology CDS 3964407 3966418 . - 0 ID=cds-PUW31_19265;Parent=gene-PUW31_19265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462564.1;locus_tag=PUW31_19265;product=alpha-amylase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3966734 3967558 . + . ID=gene-PUW31_19270;Name=PUW31_19270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19270 CP118128.1 Protein Homology CDS 3966734 3967558 . + 0 ID=cds-WJH08240.1;Parent=gene-PUW31_19270;Dbxref=NCBI_GP:WJH08240.1;Name=WJH08240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462563.1;locus_tag=PUW31_19270;product=protein bax;protein_id=WJH08240.1;transl_table=11 CP118128.1 Genbank gene 3967619 3968797 . - . ID=gene-PUW31_19275;Name=PUW31_19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19275 CP118128.1 Protein Homology CDS 3967619 3968797 . - 0 ID=cds-WJH08241.1;Parent=gene-PUW31_19275;Dbxref=NCBI_GP:WJH08241.1;Name=WJH08241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462562.1;locus_tag=PUW31_19275;product=XylR family transcriptional regulator;protein_id=WJH08241.1;transl_table=11 CP118128.1 Genbank gene 3969160 3970482 . + . ID=gene-PUW31_19280;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=PUW31_19280 CP118128.1 Protein Homology CDS 3969160 3970482 . + 0 ID=cds-WJH08242.1;Parent=gene-PUW31_19280;Dbxref=NCBI_GP:WJH08242.1;Name=WJH08242.1;Ontology_term=GO:0006098,GO:0042732,GO:0000287,GO:0009045;gbkey=CDS;gene=xylA;go_function=magnesium ion binding|0000287||IEA,xylose isomerase activity|0009045||IEA;go_process=pentose-phosphate shunt|0006098||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462561.1;locus_tag=PUW31_19280;product=xylose isomerase;protein_id=WJH08242.1;transl_table=11 CP118128.1 Genbank gene 3970582 3972036 . + . ID=gene-PUW31_19285;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=PUW31_19285 CP118128.1 Protein Homology CDS 3970582 3972036 . + 0 ID=cds-WJH08243.1;Parent=gene-PUW31_19285;Dbxref=NCBI_GP:WJH08243.1;Name=WJH08243.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462560.1;locus_tag=PUW31_19285;product=xylulokinase;protein_id=WJH08243.1;transl_table=11 CP118128.1 Genbank gene 3972211 3972564 . + . ID=gene-PUW31_19290;Name=PUW31_19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19290 CP118128.1 Protein Homology CDS 3972211 3972564 . + 0 ID=cds-WJH08244.1;Parent=gene-PUW31_19290;Dbxref=NCBI_GP:WJH08244.1;Name=WJH08244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462559.1;locus_tag=PUW31_19290;product=YiaA/YiaB family protein;protein_id=WJH08244.1;transl_table=11 CP118128.1 Genbank pseudogene 3972587 3973582 . - . ID=gene-PUW31_19295;Name=PUW31_19295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_19295;pseudo=true CP118128.1 Protein Homology CDS 3972587 3973582 . - 0 ID=cds-PUW31_19295;Parent=gene-PUW31_19295;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462558.1;locus_tag=PUW31_19295;product=acyltransferase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3973748 3974050 . + . ID=gene-PUW31_19300;Name=PUW31_19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19300 CP118128.1 Protein Homology CDS 3973748 3974050 . + 0 ID=cds-WJH08245.1;Parent=gene-PUW31_19300;Dbxref=NCBI_GP:WJH08245.1;Name=WJH08245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462557.1;locus_tag=PUW31_19300;product=YsaB family lipoprotein;protein_id=WJH08245.1;transl_table=11 CP118128.1 Genbank gene 3974189 3975100 . + . ID=gene-PUW31_19305;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=PUW31_19305 CP118128.1 Protein Homology CDS 3974189 3975100 . + 0 ID=cds-WJH08246.1;Parent=gene-PUW31_19305;Dbxref=NCBI_GP:WJH08246.1;Name=WJH08246.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyQ;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462556.1;locus_tag=PUW31_19305;product=glycine--tRNA ligase subunit alpha;protein_id=WJH08246.1;transl_table=11 CP118128.1 Genbank gene 3975110 3977179 . + . ID=gene-PUW31_19310;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=PUW31_19310 CP118128.1 Protein Homology CDS 3975110 3977179 . + 0 ID=cds-WJH08247.1;Parent=gene-PUW31_19310;Dbxref=NCBI_GP:WJH08247.1;Name=WJH08247.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyS;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=PUW31_19310;product=glycine--tRNA ligase subunit beta;protein_id=WJH08247.1;transl_table=11 CP118128.1 Genbank pseudogene 3977569 3977967 . + . ID=gene-PUW31_19315;Name=PUW31_19315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_19315;pseudo=true CP118128.1 Protein Homology CDS 3977569 3977967 . + 0 ID=cds-PUW31_19315;Parent=gene-PUW31_19315;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=PUW31_19315;product=IS3 family transposase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3978139 3978606 . + . ID=gene-PUW31_19320;Name=PUW31_19320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19320 CP118128.1 Protein Homology CDS 3978139 3978606 . + 0 ID=cds-WJH08248.1;Parent=gene-PUW31_19320;Dbxref=NCBI_GP:WJH08248.1;Name=WJH08248.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462554.1;locus_tag=PUW31_19320;product=GNAT family N-acetyltransferase;protein_id=WJH08248.1;transl_table=11 CP118128.1 Genbank gene 3978784 3979071 . + . ID=gene-PUW31_19325;Name=PUW31_19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19325 CP118128.1 Protein Homology CDS 3978784 3979071 . + 0 ID=cds-WJH08249.1;Parent=gene-PUW31_19325;Dbxref=NCBI_GP:WJH08249.1;Name=WJH08249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462553.1;locus_tag=PUW31_19325;product=DUF1778 domain-containing protein;protein_id=WJH08249.1;transl_table=11 CP118128.1 Genbank gene 3979086 3979544 . + . ID=gene-PUW31_19330;Name=PUW31_19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19330 CP118128.1 Protein Homology CDS 3979086 3979544 . + 0 ID=cds-WJH08250.1;Parent=gene-PUW31_19330;Dbxref=NCBI_GP:WJH08250.1;Name=WJH08250.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810665.1;locus_tag=PUW31_19330;product=GNAT family N-acetyltransferase;protein_id=WJH08250.1;transl_table=11 CP118128.1 Genbank gene 3979915 3980454 . - . ID=gene-PUW31_19335;Name=cueP;gbkey=Gene;gene=cueP;gene_biotype=protein_coding;locus_tag=PUW31_19335 CP118128.1 Protein Homology CDS 3979915 3980454 . - 0 ID=cds-WJH08251.1;Parent=gene-PUW31_19335;Dbxref=NCBI_GP:WJH08251.1;Name=WJH08251.1;gbkey=CDS;gene=cueP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462551.1;locus_tag=PUW31_19335;product=copper-binding periplasmic metallochaperone CueP;protein_id=WJH08251.1;transl_table=11 CP118128.1 Genbank gene 3980628 3980840 . - . ID=gene-PUW31_19340;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;locus_tag=PUW31_19340 CP118128.1 Protein Homology CDS 3980628 3980840 . - 0 ID=cds-WJH08252.1;Parent=gene-PUW31_19340;Dbxref=NCBI_GP:WJH08252.1;Name=WJH08252.1;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=PUW31_19340;product=RNA chaperone/antiterminator CspA;protein_id=WJH08252.1;transl_table=11 CP118128.1 Genbank gene 3981128 3981418 . - . ID=gene-PUW31_19345;Name=PUW31_19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19345 CP118128.1 Protein Homology CDS 3981128 3981418 . - 0 ID=cds-WJH08253.1;Parent=gene-PUW31_19345;Dbxref=NCBI_GP:WJH08253.1;Name=WJH08253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462549.1;locus_tag=PUW31_19345;product=HTH-type transcriptional regulator;protein_id=WJH08253.1;transl_table=11 CP118128.1 Genbank gene 3981857 3982567 . + . ID=gene-PUW31_19350;Name=PUW31_19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19350 CP118128.1 Protein Homology CDS 3981857 3982567 . + 0 ID=cds-WJH08254.1;Parent=gene-PUW31_19350;Dbxref=NCBI_GP:WJH08254.1;Name=WJH08254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462548.1;locus_tag=PUW31_19350;product=DUF3053 domain-containing protein;protein_id=WJH08254.1;transl_table=11 CP118128.1 Genbank gene 3982617 3983591 . - . ID=gene-PUW31_19355;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=PUW31_19355 CP118128.1 Protein Homology CDS 3982617 3983591 . - 0 ID=cds-WJH08255.1;Parent=gene-PUW31_19355;Dbxref=NCBI_GP:WJH08255.1;Name=WJH08255.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462547.1;locus_tag=PUW31_19355;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WJH08255.1;transl_table=11 CP118128.1 Genbank gene 3983810 3984472 . - . ID=gene-PUW31_19360;Name=PUW31_19360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19360 CP118128.1 Protein Homology CDS 3983810 3984472 . - 0 ID=cds-WJH08256.1;Parent=gene-PUW31_19360;Dbxref=NCBI_GP:WJH08256.1;Name=WJH08256.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462546.1;locus_tag=PUW31_19360;product=OmpA family lipoprotein;protein_id=WJH08256.1;transl_table=11 CP118128.1 Genbank gene 3984625 3986958 . + . ID=gene-PUW31_19365;Name=PUW31_19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19365 CP118128.1 Protein Homology CDS 3984625 3986958 . + 0 ID=cds-WJH08257.1;Parent=gene-PUW31_19365;Dbxref=NCBI_GP:WJH08257.1;Name=WJH08257.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462545.1;locus_tag=PUW31_19365;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WJH08257.1;transl_table=11 CP118128.1 Genbank gene 3986927 3987367 . - . ID=gene-PUW31_19370;Name=PUW31_19370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19370 CP118128.1 Protein Homology CDS 3986927 3987367 . - 0 ID=cds-WJH08258.1;Parent=gene-PUW31_19370;Dbxref=NCBI_GP:WJH08258.1;Name=WJH08258.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462544.1;locus_tag=PUW31_19370;product=N-acetyltransferase;protein_id=WJH08258.1;transl_table=11 CP118128.1 Genbank gene 3987345 3987926 . - . ID=gene-PUW31_19375;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=PUW31_19375 CP118128.1 Protein Homology CDS 3987345 3987926 . - 0 ID=cds-WJH08259.1;Parent=gene-PUW31_19375;Dbxref=NCBI_GP:WJH08259.1;Name=WJH08259.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462543.1;locus_tag=PUW31_19375;product=DNA-3-methyladenine glycosylase I;protein_id=WJH08259.1;transl_table=11 CP118128.1 Genbank gene 3988083 3988787 . + . ID=gene-PUW31_19380;Name=PUW31_19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19380 CP118128.1 Protein Homology CDS 3988083 3988787 . + 0 ID=cds-WJH08260.1;Parent=gene-PUW31_19380;Dbxref=NCBI_GP:WJH08260.1;Name=WJH08260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462542.1;locus_tag=PUW31_19380;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WJH08260.1;transl_table=11 CP118128.1 Genbank pseudogene 3988809 3988943 . + . ID=gene-PUW31_19385;Name=PUW31_19385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_19385;pseudo=true CP118128.1 Protein Homology CDS 3988809 3988943 . + 0 ID=cds-PUW31_19385;Parent=gene-PUW31_19385;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015585546.1;locus_tag=PUW31_19385;product=oxalate/formate antiport family MFS transporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3989302 3989826 . + . ID=gene-PUW31_19390;Name=lpfA;gbkey=Gene;gene=lpfA;gene_biotype=protein_coding;locus_tag=PUW31_19390 CP118128.1 Protein Homology CDS 3989302 3989826 . + 0 ID=cds-WJH08261.1;Parent=gene-PUW31_19390;Dbxref=NCBI_GP:WJH08261.1;Name=WJH08261.1;gbkey=CDS;gene=lpfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519917.1;locus_tag=PUW31_19390;product=long polar fimbria major subunit LpfA;protein_id=WJH08261.1;transl_table=11 CP118128.1 Genbank gene 3989911 3990609 . + . ID=gene-PUW31_19395;Name=lpfB;gbkey=Gene;gene=lpfB;gene_biotype=protein_coding;locus_tag=PUW31_19395 CP118128.1 Protein Homology CDS 3989911 3990609 . + 0 ID=cds-WJH08262.1;Parent=gene-PUW31_19395;Dbxref=NCBI_GP:WJH08262.1;Name=WJH08262.1;gbkey=CDS;gene=lpfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462540.1;locus_tag=PUW31_19395;product=long polar fimbrial biogenesis chaperone LpfB;protein_id=WJH08262.1;transl_table=11 CP118128.1 Genbank pseudogene 3990632 3993159 . + . ID=gene-PUW31_19400;Name=lpfC;gbkey=Gene;gene=lpfC;gene_biotype=pseudogene;locus_tag=PUW31_19400;pseudo=true CP118128.1 Protein Homology CDS 3990632 3993159 . + 0 ID=cds-PUW31_19400;Parent=gene-PUW31_19400;Note=frameshifted;gbkey=CDS;gene=lpfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462539.1;locus_tag=PUW31_19400;product=outer membrane usher protein LpfC;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3993177 3994256 . + . ID=gene-PUW31_19405;Name=lpfD;gbkey=Gene;gene=lpfD;gene_biotype=protein_coding;locus_tag=PUW31_19405 CP118128.1 Protein Homology CDS 3993177 3994256 . + 0 ID=cds-WJH08263.1;Parent=gene-PUW31_19405;Dbxref=NCBI_GP:WJH08263.1;Name=WJH08263.1;gbkey=CDS;gene=lpfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462538.1;locus_tag=PUW31_19405;product=long polar fimbrial protein LpfD;protein_id=WJH08263.1;transl_table=11 CP118128.1 Genbank gene 3994262 3994789 . + . ID=gene-PUW31_19410;Name=lpfE;gbkey=Gene;gene=lpfE;gene_biotype=protein_coding;locus_tag=PUW31_19410 CP118128.1 Protein Homology CDS 3994262 3994789 . + 0 ID=cds-WJH08264.1;Parent=gene-PUW31_19410;Dbxref=NCBI_GP:WJH08264.1;Name=WJH08264.1;gbkey=CDS;gene=lpfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462537.1;locus_tag=PUW31_19410;product=long polar fimbrial protein LpfE;protein_id=WJH08264.1;transl_table=11 CP118128.1 Genbank gene 3995007 3996698 . + . ID=gene-PUW31_19415;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=PUW31_19415 CP118128.1 Protein Homology CDS 3995007 3996698 . + 0 ID=cds-WJH08265.1;Parent=gene-PUW31_19415;Dbxref=NCBI_GP:WJH08265.1;Name=WJH08265.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462536.1;locus_tag=PUW31_19415;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WJH08265.1;transl_table=11 CP118128.1 Genbank gene 3996789 3996865 . + . ID=gene-PUW31_19420;Name=PUW31_19420;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_19420 CP118128.1 tRNAscan-SE tRNA 3996789 3996865 . + . ID=rna-PUW31_19420;Parent=gene-PUW31_19420;anticodon=(pos:3996823..3996825);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_19420;product=tRNA-Pro CP118128.1 tRNAscan-SE exon 3996789 3996865 . + . ID=exon-PUW31_19420-1;Parent=rna-PUW31_19420;anticodon=(pos:3996823..3996825);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_19420;product=tRNA-Pro CP118128.1 Genbank gene 3996902 3997020 . + . ID=gene-PUW31_19425;Name=PUW31_19425;gbkey=Gene;gene_biotype=ncRNA;locus_tag=PUW31_19425 CP118128.1 cmsearch ncRNA 3996902 3997020 . + . ID=rna-PUW31_19425;Parent=gene-PUW31_19425;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_19425;product=RtT sRNA CP118128.1 cmsearch exon 3996902 3997020 . + . ID=exon-PUW31_19425-1;Parent=rna-PUW31_19425;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_19425;product=RtT sRNA CP118128.1 Genbank pseudogene 3997011 3998010 . - . ID=gene-PUW31_19430;Name=PUW31_19430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_19430;pseudo=true CP118128.1 Protein Homology CDS 3997011 3998010 . - 0 ID=cds-PUW31_19430;Parent=gene-PUW31_19430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462535.1;locus_tag=PUW31_19430;product=substrate-binding domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 3998160 3999284 . + . ID=gene-PUW31_19435;Name=PUW31_19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19435 CP118128.1 Protein Homology CDS 3998160 3999284 . + 0 ID=cds-WJH08266.1;Parent=gene-PUW31_19435;Dbxref=NCBI_GP:WJH08266.1;Name=WJH08266.1;Ontology_term=GO:0004062;gbkey=CDS;go_function=aryl sulfotransferase activity|0004062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462534.1;locus_tag=PUW31_19435;product=aryl-sulfate sulfotransferase;protein_id=WJH08266.1;transl_table=11 CP118128.1 Genbank gene 3999342 4000667 . + . ID=gene-PUW31_19440;Name=PUW31_19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19440 CP118128.1 Protein Homology CDS 3999342 4000667 . + 0 ID=cds-WJH08267.1;Parent=gene-PUW31_19440;Dbxref=NCBI_GP:WJH08267.1;Name=WJH08267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462533.1;locus_tag=PUW31_19440;product=uracil-xanthine permease family protein;protein_id=WJH08267.1;transl_table=11 CP118128.1 Genbank pseudogene 4001223 4002830 . + . ID=gene-PUW31_19445;Name=PUW31_19445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_19445;pseudo=true CP118128.1 Protein Homology CDS 4001223 4002830 . + 0 ID=cds-PUW31_19445;Parent=gene-PUW31_19445;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=PUW31_19445;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 4002987 4004003 . + . ID=gene-PUW31_19450;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=pseudogene;locus_tag=PUW31_19450;pseudo=true CP118128.1 Protein Homology CDS 4002987 4004003 . + 0 ID=cds-PUW31_19450;Parent=gene-PUW31_19450;Note=frameshifted;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=PUW31_19450;product=dipeptide ABC transporter permease DppB;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 4004013 4004914 . + . ID=gene-PUW31_19455;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=pseudogene;locus_tag=PUW31_19455;pseudo=true CP118128.1 Protein Homology CDS 4004013 4004914 . + 0 ID=cds-PUW31_19455;Parent=gene-PUW31_19455;Note=frameshifted;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=PUW31_19455;product=dipeptide ABC transporter permease DppC;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4004925 4005908 . + . ID=gene-PUW31_19460;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=PUW31_19460 CP118128.1 Protein Homology CDS 4004925 4005908 . + 0 ID=cds-WJH08268.1;Parent=gene-PUW31_19460;Dbxref=NCBI_GP:WJH08268.1;Name=WJH08268.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462529.1;locus_tag=PUW31_19460;product=dipeptide ABC transporter ATP-binding protein;protein_id=WJH08268.1;transl_table=11 CP118128.1 Genbank gene 4005905 4006918 . + . ID=gene-PUW31_19465;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=PUW31_19465 CP118128.1 Protein Homology CDS 4005905 4006918 . + 0 ID=cds-WJH08269.1;Parent=gene-PUW31_19465;Dbxref=NCBI_GP:WJH08269.1;Name=WJH08269.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462528.1;locus_tag=PUW31_19465;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WJH08269.1;transl_table=11 CP118128.1 Genbank pseudogene 4007019 4008317 . - . ID=gene-PUW31_19470;Name=PUW31_19470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_19470;pseudo=true CP118128.1 Protein Homology CDS 4007019 4008317 . - 0 ID=cds-PUW31_19470;Parent=gene-PUW31_19470;Note=internal stop;Ontology_term=GO:0003333;gbkey=CDS;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462527.1;locus_tag=PUW31_19470;product=aromatic amino acid transport family protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 4008435 4008584 . - . ID=gene-PUW31_19475;Name=PUW31_19475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_19475;pseudo=true CP118128.1 Protein Homology CDS 4008435 4008584 . - 0 ID=cds-PUW31_19475;Parent=gene-PUW31_19475;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: protein motif:HMM:NF013237.2;locus_tag=PUW31_19475;product=PLP-dependent transferase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4008960 4009067 . + . ID=gene-PUW31_19480;Name=PUW31_19480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19480 CP118128.1 Protein Homology CDS 4008960 4009067 . + 0 ID=cds-WJH08270.1;Parent=gene-PUW31_19480;Dbxref=NCBI_GP:WJH08270.1;Name=WJH08270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141634.1;locus_tag=PUW31_19480;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WJH08270.1;transl_table=11 CP118128.1 Genbank pseudogene 4009149 4010827 . - . ID=gene-PUW31_19485;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=pseudogene;locus_tag=PUW31_19485;pseudo=true CP118128.1 Protein Homology CDS 4009149 4010827 . - 0 ID=cds-PUW31_19485;Parent=gene-PUW31_19485;Note=frameshifted%3B internal stop;Ontology_term=GO:0030244,GO:0003674,GO:0005575;gbkey=CDS;gene=bcsG;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462525.1;locus_tag=PUW31_19485;product=cellulose biosynthesis protein BcsG;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4010824 4011015 . - . ID=gene-PUW31_19490;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=PUW31_19490 CP118128.1 Protein Homology CDS 4010824 4011015 . - 0 ID=cds-WJH08271.1;Parent=gene-PUW31_19490;Dbxref=NCBI_GP:WJH08271.1;Name=WJH08271.1;Ontology_term=GO:0052324,GO:0003674,GO:0005575;gbkey=CDS;gene=bcsF;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462524.1;locus_tag=PUW31_19490;product=cellulose biosynthesis protein BcsF;protein_id=WJH08271.1;transl_table=11 CP118128.1 Genbank gene 4011012 4012583 . - . ID=gene-PUW31_19495;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=PUW31_19495 CP118128.1 Protein Homology CDS 4011012 4012583 . - 0 ID=cds-WJH08272.1;Parent=gene-PUW31_19495;Dbxref=NCBI_GP:WJH08272.1;Name=WJH08272.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462523.1;locus_tag=PUW31_19495;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=WJH08272.1;transl_table=11 CP118128.1 Genbank gene 4012828 4013031 . + . ID=gene-PUW31_19500;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=PUW31_19500 CP118128.1 Protein Homology CDS 4012828 4013031 . + 0 ID=cds-WJH08273.1;Parent=gene-PUW31_19500;Dbxref=NCBI_GP:WJH08273.1;Name=WJH08273.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462522.1;locus_tag=PUW31_19500;product=cellulose biosynthesis protein BcsR;protein_id=WJH08273.1;transl_table=11 CP118128.1 Genbank pseudogene 4013032 4013784 . + . ID=gene-PUW31_19505;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=pseudogene;locus_tag=PUW31_19505;pseudo=true CP118128.1 Protein Homology CDS 4013032 4013784 . + 0 ID=cds-PUW31_19505;Parent=gene-PUW31_19505;Note=internal stop;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462521.1;locus_tag=PUW31_19505;product=cellulose biosynthesis protein BcsQ;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4013781 4016405 . + . ID=gene-PUW31_19510;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=PUW31_19510 CP118128.1 Protein Homology CDS 4013781 4016405 . + 0 ID=cds-WJH08274.1;Parent=gene-PUW31_19510;Dbxref=NCBI_GP:WJH08274.1;Name=WJH08274.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462520.1;locus_tag=PUW31_19510;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WJH08274.1;transl_table=11 CP118128.1 Genbank gene 4016416 4018716 . + . ID=gene-PUW31_19515;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=PUW31_19515 CP118128.1 Protein Homology CDS 4016416 4018716 . + 0 ID=cds-WJH08275.1;Parent=gene-PUW31_19515;Dbxref=NCBI_GP:WJH08275.1;Name=WJH08275.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462519.1;locus_tag=PUW31_19515;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WJH08275.1;transl_table=11 CP118128.1 Genbank gene 4018720 4019829 . + . ID=gene-PUW31_19520;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=PUW31_19520 CP118128.1 Protein Homology CDS 4018720 4019829 . + 0 ID=cds-WJH08276.1;Parent=gene-PUW31_19520;Dbxref=NCBI_GP:WJH08276.1;Name=WJH08276.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462518.1;locus_tag=PUW31_19520;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WJH08276.1;transl_table=11 CP118128.1 Genbank gene 4019811 4023296 . + . ID=gene-PUW31_19525;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=PUW31_19525 CP118128.1 Protein Homology CDS 4019811 4023296 . + 0 ID=cds-WJH08277.1;Parent=gene-PUW31_19525;Dbxref=NCBI_GP:WJH08277.1;Name=WJH08277.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=PUW31_19525;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WJH08277.1;transl_table=11 CP118128.1 Genbank gene 4023470 4025476 . + . ID=gene-PUW31_19530;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=PUW31_19530 CP118128.1 Protein Homology CDS 4023470 4025476 . + 0 ID=cds-WJH08278.1;Parent=gene-PUW31_19530;Dbxref=NCBI_GP:WJH08278.1;Name=WJH08278.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266355.1;locus_tag=PUW31_19530;product=biofilm formation regulator HmsP;protein_id=WJH08278.1;transl_table=11 CP118128.1 Genbank gene 4025634 4026920 . + . ID=gene-PUW31_19535;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=PUW31_19535 CP118128.1 Protein Homology CDS 4025634 4026920 . + 0 ID=cds-WJH08279.1;Parent=gene-PUW31_19535;Dbxref=NCBI_GP:WJH08279.1;Name=WJH08279.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000858227.1;locus_tag=PUW31_19535;product=C4-dicarboxylate transporter DctC;protein_id=WJH08279.1;transl_table=11 CP118128.1 Genbank gene 4027140 4028627 . + . ID=gene-PUW31_19540;Name=PUW31_19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19540 CP118128.1 Protein Homology CDS 4027140 4028627 . + 0 ID=cds-WJH08280.1;Parent=gene-PUW31_19540;Dbxref=NCBI_GP:WJH08280.1;Name=WJH08280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462514.1;locus_tag=PUW31_19540;product=pitrilysin family protein;protein_id=WJH08280.1;transl_table=11 CP118128.1 Genbank gene 4028681 4029610 . - . ID=gene-PUW31_19545;Name=PUW31_19545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19545 CP118128.1 Protein Homology CDS 4028681 4029610 . - 0 ID=cds-WJH08281.1;Parent=gene-PUW31_19545;Dbxref=NCBI_GP:WJH08281.1;Name=WJH08281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462513.1;locus_tag=PUW31_19545;product=sugar kinase;protein_id=WJH08281.1;transl_table=11 CP118128.1 Genbank pseudogene 4029839 4030605 . + . ID=gene-PUW31_19550;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=pseudogene;locus_tag=PUW31_19550;pseudo=true CP118128.1 Protein Homology CDS 4029839 4030605 . + 0 ID=cds-PUW31_19550;Parent=gene-PUW31_19550;Note=frameshifted;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462512.1;locus_tag=PUW31_19550;product=cyclic-guanylate-specific phosphodiesterase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 4030715 4032775 . + . ID=gene-PUW31_19555;Name=PUW31_19555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_19555;pseudo=true CP118128.1 Protein Homology CDS 4030715 4032775 . + 0 ID=cds-PUW31_19555;Parent=gene-PUW31_19555;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462511.1;locus_tag=PUW31_19555;product=AsmA family protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 4032815 4034136 . - . ID=gene-PUW31_19560;Name=PUW31_19560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_19560;pseudo=true CP118128.1 Protein Homology CDS 4032815 4034136 . - 0 ID=cds-PUW31_19560;Parent=gene-PUW31_19560;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462510.1;locus_tag=PUW31_19560;product=MFS transporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4034487 4035515 . - . ID=gene-PUW31_19565;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=PUW31_19565 CP118128.1 Protein Homology CDS 4034487 4035515 . - 0 ID=cds-WJH08282.1;Parent=gene-PUW31_19565;Dbxref=NCBI_GP:WJH08282.1;Name=WJH08282.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462509.1;locus_tag=PUW31_19565;product=inner membrane protein YhjD;protein_id=WJH08282.1;transl_table=11 CP118128.1 Genbank pseudogene 4035588 4036486 . - . ID=gene-PUW31_19570;Name=PUW31_19570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_19570;pseudo=true CP118128.1 Protein Homology CDS 4035588 4036486 . - 0 ID=cds-PUW31_19570;Parent=gene-PUW31_19570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462508.1;locus_tag=PUW31_19570;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 4037117 4037715 . + . ID=gene-PUW31_19575;Name=PUW31_19575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_19575;pseudo=true CP118128.1 Protein Homology CDS 4037117 4037715 . + 0 ID=cds-PUW31_19575;Parent=gene-PUW31_19575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462507.1;locus_tag=PUW31_19575;product=response regulator transcription factor;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4037721 4038077 . - . ID=gene-PUW31_19580;Name=PUW31_19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19580 CP118128.1 Protein Homology CDS 4037721 4038077 . - 0 ID=cds-WJH08283.1;Parent=gene-PUW31_19580;Dbxref=NCBI_GP:WJH08283.1;Name=WJH08283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462506.1;locus_tag=PUW31_19580;product=lysozyme;protein_id=WJH08283.1;transl_table=11 CP118128.1 Genbank pseudogene 4038358 4039946 . + . ID=gene-PUW31_19585;Name=PUW31_19585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_19585;pseudo=true CP118128.1 Protein Homology CDS 4038358 4039946 . + 0 ID=cds-PUW31_19585;Parent=gene-PUW31_19585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=PUW31_19585;product=STY4199 family HEPN domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4039959 4041608 . - . ID=gene-PUW31_19590;Name=PUW31_19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19590 CP118128.1 Protein Homology CDS 4039959 4041608 . - 0 ID=cds-WJH08284.1;Parent=gene-PUW31_19590;Dbxref=NCBI_GP:WJH08284.1;Name=WJH08284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462504.1;locus_tag=PUW31_19590;product=alpha%2Calpha-trehalase;protein_id=WJH08284.1;transl_table=11 CP118128.1 Genbank gene 4041934 4042653 . + . ID=gene-PUW31_19595;Name=PUW31_19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19595 CP118128.1 Protein Homology CDS 4041934 4042653 . + 0 ID=cds-WJH08285.1;Parent=gene-PUW31_19595;Dbxref=NCBI_GP:WJH08285.1;Name=WJH08285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462503.1;locus_tag=PUW31_19595;product=GntR family transcriptional regulator;protein_id=WJH08285.1;transl_table=11 CP118128.1 Genbank pseudogene 4042829 4043805 . + . ID=gene-PUW31_19600;Name=fraB;gbkey=Gene;gene=fraB;gene_biotype=pseudogene;locus_tag=PUW31_19600;pseudo=true CP118128.1 Protein Homology CDS 4042829 4043805 . + 0 ID=cds-PUW31_19600;Parent=gene-PUW31_19600;Note=frameshifted;gbkey=CDS;gene=fraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462502.1;locus_tag=PUW31_19600;product=6-phosphofructose-aspartate deglycase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4043869 4044714 . + . ID=gene-PUW31_19605;Name=fraD;gbkey=Gene;gene=fraD;gene_biotype=protein_coding;locus_tag=PUW31_19605 CP118128.1 Protein Homology CDS 4043869 4044714 . + 0 ID=cds-WJH10793.1;Parent=gene-PUW31_19605;Dbxref=NCBI_GP:WJH10793.1;Name=WJH10793.1;gbkey=CDS;gene=fraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462501.1;locus_tag=PUW31_19605;product=fructose-aspartate kinase;protein_id=WJH10793.1;transl_table=11 CP118128.1 Genbank gene 4044768 4046087 . + . ID=gene-PUW31_19610;Name=PUW31_19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19610 CP118128.1 Protein Homology CDS 4044768 4046087 . + 0 ID=cds-WJH08286.1;Parent=gene-PUW31_19610;Dbxref=NCBI_GP:WJH08286.1;Name=WJH08286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462500.1;locus_tag=PUW31_19610;product=anaerobic C4-dicarboxylate transporter family protein;protein_id=WJH08286.1;transl_table=11 CP118128.1 Genbank gene 4046146 4047189 . + . ID=gene-PUW31_19615;Name=fraE;gbkey=Gene;gene=fraE;gene_biotype=protein_coding;locus_tag=PUW31_19615 CP118128.1 Protein Homology CDS 4046146 4047189 . + 0 ID=cds-WJH08287.1;Parent=gene-PUW31_19615;Dbxref=NCBI_GP:WJH08287.1;Name=WJH08287.1;gbkey=CDS;gene=fraE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=PUW31_19615;product=fructose-asparagine asparaginase;protein_id=WJH08287.1;transl_table=11 CP118128.1 Genbank gene 4047236 4048588 . - . ID=gene-PUW31_19620;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=PUW31_19620 CP118128.1 Protein Homology CDS 4047236 4048588 . - 0 ID=cds-WJH08288.1;Parent=gene-PUW31_19620;Dbxref=NCBI_GP:WJH08288.1;Name=WJH08288.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=PUW31_19620;product=glutathione-disulfide reductase;protein_id=WJH08288.1;transl_table=11 CP118128.1 Genbank gene 4048693 4049535 . - . ID=gene-PUW31_19625;Name=PUW31_19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19625 CP118128.1 Protein Homology CDS 4048693 4049535 . - 0 ID=cds-WJH08289.1;Parent=gene-PUW31_19625;Dbxref=NCBI_GP:WJH08289.1;Name=WJH08289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462497.1;locus_tag=PUW31_19625;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WJH08289.1;transl_table=11 CP118128.1 Genbank gene 4049746 4051017 . + . ID=gene-PUW31_19630;Name=PUW31_19630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19630 CP118128.1 Protein Homology CDS 4049746 4051017 . + 0 ID=cds-WJH08290.1;Parent=gene-PUW31_19630;Dbxref=NCBI_GP:WJH08290.1;Name=WJH08290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462496.1;locus_tag=PUW31_19630;product=phosphatase PAP2 family protein;protein_id=WJH08290.1;transl_table=11 CP118128.1 Genbank gene 4051199 4053241 . + . ID=gene-PUW31_19635;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=PUW31_19635 CP118128.1 Protein Homology CDS 4051199 4053241 . + 0 ID=cds-WJH08291.1;Parent=gene-PUW31_19635;Dbxref=NCBI_GP:WJH08291.1;Name=WJH08291.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317218.1;locus_tag=PUW31_19635;product=oligopeptidase A;protein_id=WJH08291.1;transl_table=11 CP118128.1 Genbank gene 4053248 4054006 . + . ID=gene-PUW31_19640;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=PUW31_19640 CP118128.1 Protein Homology CDS 4053248 4054006 . + 0 ID=cds-WJH08292.1;Parent=gene-PUW31_19640;Dbxref=NCBI_GP:WJH08292.1;Name=WJH08292.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462494.1;locus_tag=PUW31_19640;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WJH08292.1;transl_table=11 CP118128.1 Genbank gene 4054098 4055570 . - . ID=gene-PUW31_19645;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=PUW31_19645 CP118128.1 Protein Homology CDS 4054098 4055570 . - 0 ID=cds-WJH08293.1;Parent=gene-PUW31_19645;Dbxref=NCBI_GP:WJH08293.1;Name=WJH08293.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462493.1;locus_tag=PUW31_19645;product=dipeptide/tripeptide permease DtpB;protein_id=WJH08293.1;transl_table=11 CP118128.1 Genbank gene 4055895 4056329 . - . ID=gene-PUW31_19650;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=PUW31_19650 CP118128.1 Protein Homology CDS 4055895 4056329 . - 0 ID=cds-WJH08294.1;Parent=gene-PUW31_19650;Dbxref=NCBI_GP:WJH08294.1;Name=WJH08294.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462492.1;locus_tag=PUW31_19650;product=universal stress protein UspA;protein_id=WJH08294.1;transl_table=11 CP118128.1 Genbank gene 4056717 4057052 . + . ID=gene-PUW31_19655;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=PUW31_19655 CP118128.1 Protein Homology CDS 4056717 4057052 . + 0 ID=cds-WJH08295.1;Parent=gene-PUW31_19655;Dbxref=NCBI_GP:WJH08295.1;Name=WJH08295.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462491.1;locus_tag=PUW31_19655;product=universal stress protein UspB;protein_id=WJH08295.1;transl_table=11 CP118128.1 Genbank gene 4057193 4058689 . - . ID=gene-PUW31_19660;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=PUW31_19660 CP118128.1 Protein Homology CDS 4057193 4058689 . - 0 ID=cds-WJH08296.1;Parent=gene-PUW31_19660;Dbxref=NCBI_GP:WJH08296.1;Name=WJH08296.1;Ontology_term=GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462490.1;locus_tag=PUW31_19660;product=inorganic phosphate transporter PitA;protein_id=WJH08296.1;transl_table=11 CP118128.1 Genbank gene 4058920 4060116 . + . ID=gene-PUW31_19665;Name=PUW31_19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19665 CP118128.1 Protein Homology CDS 4058920 4060116 . + 0 ID=cds-WJH08297.1;Parent=gene-PUW31_19665;Dbxref=NCBI_GP:WJH08297.1;Name=WJH08297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462489.1;locus_tag=PUW31_19665;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WJH08297.1;transl_table=11 CP118128.1 Genbank gene 4060422 4061489 . + . ID=gene-PUW31_19670;Name=PUW31_19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19670 CP118128.1 Protein Homology CDS 4060422 4061489 . + 0 ID=cds-WJH08298.1;Parent=gene-PUW31_19670;Dbxref=NCBI_GP:WJH08298.1;Name=WJH08298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462488.1;locus_tag=PUW31_19670;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WJH08298.1;transl_table=11 CP118128.1 Genbank gene 4061486 4064227 . + . ID=gene-PUW31_19675;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=PUW31_19675 CP118128.1 Protein Homology CDS 4061486 4064227 . + 0 ID=cds-WJH08299.1;Parent=gene-PUW31_19675;Dbxref=NCBI_GP:WJH08299.1;Name=WJH08299.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=rbbA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709254.1;locus_tag=PUW31_19675;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WJH08299.1;transl_table=11 CP118128.1 Genbank gene 4064227 4065351 . + . ID=gene-PUW31_19680;Name=PUW31_19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19680 CP118128.1 Protein Homology CDS 4064227 4065351 . + 0 ID=cds-WJH08300.1;Parent=gene-PUW31_19680;Dbxref=NCBI_GP:WJH08300.1;Name=WJH08300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462486.1;locus_tag=PUW31_19680;product=ABC transporter permease;protein_id=WJH08300.1;transl_table=11 CP118128.1 Genbank gene 4065440 4065841 . - . ID=gene-PUW31_19685;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=PUW31_19685 CP118128.1 Protein Homology CDS 4065440 4065841 . - 0 ID=cds-WJH08301.1;Parent=gene-PUW31_19685;Dbxref=NCBI_GP:WJH08301.1;Name=WJH08301.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462485.1;locus_tag=PUW31_19685;product=nickel-responsive transcriptional regulator NikR;protein_id=WJH08301.1;transl_table=11 CP118128.1 Genbank gene 4065933 4066511 . - . ID=gene-PUW31_19690;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=PUW31_19690 CP118128.1 Protein Homology CDS 4065933 4066511 . - 0 ID=cds-WJH08302.1;Parent=gene-PUW31_19690;Dbxref=NCBI_GP:WJH08302.1;Name=WJH08302.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462484.1;locus_tag=PUW31_19690;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WJH08302.1;transl_table=11 CP118128.1 Genbank gene 4066563 4067612 . - . ID=gene-PUW31_19695;Name=PUW31_19695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19695 CP118128.1 Protein Homology CDS 4066563 4067612 . - 0 ID=cds-WJH08303.1;Parent=gene-PUW31_19695;Dbxref=NCBI_GP:WJH08303.1;Name=WJH08303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462483.1;locus_tag=PUW31_19695;product=AI-2E family transporter;protein_id=WJH08303.1;transl_table=11 CP118128.1 Genbank gene 4067702 4068961 . + . ID=gene-PUW31_19700;Name=PUW31_19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19700 CP118128.1 Protein Homology CDS 4067702 4068961 . + 0 ID=cds-WJH08304.1;Parent=gene-PUW31_19700;Dbxref=NCBI_GP:WJH08304.1;Name=WJH08304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462482.3;locus_tag=PUW31_19700;product=MFS transporter;protein_id=WJH08304.1;transl_table=11 CP118128.1 Genbank gene 4068965 4069522 . - . ID=gene-PUW31_19705;Name=PUW31_19705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19705 CP118128.1 Protein Homology CDS 4068965 4069522 . - 0 ID=cds-WJH08305.1;Parent=gene-PUW31_19705;Dbxref=NCBI_GP:WJH08305.1;Name=WJH08305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462481.1;locus_tag=PUW31_19705;product=DcrB family lipoprotein;protein_id=WJH08305.1;transl_table=11 CP118128.1 Genbank gene 4069595 4070260 . - . ID=gene-PUW31_19710;Name=PUW31_19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19710 CP118128.1 Protein Homology CDS 4069595 4070260 . - 0 ID=cds-WJH08306.1;Parent=gene-PUW31_19710;Dbxref=NCBI_GP:WJH08306.1;Name=WJH08306.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462480.1;locus_tag=PUW31_19710;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WJH08306.1;transl_table=11 CP118128.1 Genbank gene 4070430 4070675 . + . ID=gene-PUW31_19715;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=PUW31_19715 CP118128.1 Protein Homology CDS 4070430 4070675 . + 0 ID=cds-WJH10794.1;Parent=gene-PUW31_19715;Dbxref=NCBI_GP:WJH10794.1;Name=WJH10794.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462479.1;locus_tag=PUW31_19715;product=sulfurtransferase TusA;protein_id=WJH10794.1;transl_table=11 CP118128.1 Genbank gene 4070699 4072342 . - . ID=gene-PUW31_19720;Name=PUW31_19720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19720 CP118128.1 Protein Homology CDS 4070699 4072342 . - 0 ID=cds-WJH08307.1;Parent=gene-PUW31_19720;Dbxref=NCBI_GP:WJH08307.1;Name=WJH08307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462478.1;locus_tag=PUW31_19720;product=methyl-accepting chemotaxis citrate transducer;protein_id=WJH08307.1;transl_table=11 CP118128.1 Genbank gene 4072542 4074740 . - . ID=gene-PUW31_19725;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=PUW31_19725 CP118128.1 Protein Homology CDS 4072542 4074740 . - 0 ID=cds-WJH08308.1;Parent=gene-PUW31_19725;Dbxref=NCBI_GP:WJH08308.1;Name=WJH08308.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462477.1;locus_tag=PUW31_19725;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WJH08308.1;transl_table=11 CP118128.1 Genbank gene 4074821 4075447 . - . ID=gene-PUW31_19730;Name=PUW31_19730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19730 CP118128.1 Protein Homology CDS 4074821 4075447 . - 0 ID=cds-WJH08309.1;Parent=gene-PUW31_19730;Dbxref=NCBI_GP:WJH08309.1;Name=WJH08309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462476.1;locus_tag=PUW31_19730;product=lysoplasmalogenase;protein_id=WJH08309.1;transl_table=11 CP118128.1 Genbank gene 4075589 4075960 . + . ID=gene-PUW31_19735;Name=PUW31_19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19735 CP118128.1 Protein Homology CDS 4075589 4075960 . + 0 ID=cds-WJH08310.1;Parent=gene-PUW31_19735;Dbxref=NCBI_GP:WJH08310.1;Name=WJH08310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462475.1;locus_tag=PUW31_19735;product=DUF2500 domain-containing protein;protein_id=WJH08310.1;transl_table=11 CP118128.1 Genbank gene 4075982 4076251 . - . ID=gene-PUW31_19740;Name=PUW31_19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19740 CP118128.1 Protein Homology CDS 4075982 4076251 . - 0 ID=cds-WJH10795.1;Parent=gene-PUW31_19740;Dbxref=NCBI_GP:WJH10795.1;Name=WJH10795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=PUW31_19740;product=DUF1145 family protein;protein_id=WJH10795.1;transl_table=11 CP118128.1 Genbank gene 4076241 4076837 . - . ID=gene-PUW31_19745;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=PUW31_19745 CP118128.1 Protein Homology CDS 4076241 4076837 . - 0 ID=cds-WJH08311.1;Parent=gene-PUW31_19745;Dbxref=NCBI_GP:WJH08311.1;Name=WJH08311.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462473.1;locus_tag=PUW31_19745;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WJH08311.1;transl_table=11 CP118128.1 Genbank gene 4076963 4078438 . + . ID=gene-PUW31_19750;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=PUW31_19750 CP118128.1 Protein Homology CDS 4076963 4078438 . + 0 ID=cds-WJH08312.1;Parent=gene-PUW31_19750;Dbxref=NCBI_GP:WJH08312.1;Name=WJH08312.1;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462472.1;locus_tag=PUW31_19750;product=signal recognition particle-docking protein FtsY;protein_id=WJH08312.1;transl_table=11 CP118128.1 Genbank gene 4078441 4079109 . + . ID=gene-PUW31_19755;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=PUW31_19755 CP118128.1 Protein Homology CDS 4078441 4079109 . + 0 ID=cds-WJH08313.1;Parent=gene-PUW31_19755;Dbxref=NCBI_GP:WJH08313.1;Name=WJH08313.1;gbkey=CDS;gene=ftsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462471.1;locus_tag=PUW31_19755;product=cell division ATP-binding protein FtsE;protein_id=WJH08313.1;transl_table=11 CP118128.1 Genbank gene 4079102 4080157 . + . ID=gene-PUW31_19760;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=PUW31_19760 CP118128.1 Protein Homology CDS 4079102 4080157 . + 0 ID=cds-WJH08314.1;Parent=gene-PUW31_19760;Dbxref=NCBI_GP:WJH08314.1;Name=WJH08314.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462470.1;locus_tag=PUW31_19760;product=permease-like cell division protein FtsX;protein_id=WJH08314.1;transl_table=11 CP118128.1 Genbank gene 4080403 4081257 . + . ID=gene-PUW31_19765;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=PUW31_19765 CP118128.1 Protein Homology CDS 4080403 4081257 . + 0 ID=cds-WJH08315.1;Parent=gene-PUW31_19765;Dbxref=NCBI_GP:WJH08315.1;Name=WJH08315.1;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoH;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462469.1;locus_tag=PUW31_19765;product=RNA polymerase sigma factor RpoH;protein_id=WJH08315.1;transl_table=11 CP118128.1 Genbank gene 4081579 4082682 . + . ID=gene-PUW31_19770;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=PUW31_19770 CP118128.1 Protein Homology CDS 4081579 4082682 . + 0 ID=cds-WJH08316.1;Parent=gene-PUW31_19770;Dbxref=NCBI_GP:WJH08316.1;Name=WJH08316.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=PUW31_19770;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WJH08316.1;transl_table=11 CP118128.1 Genbank gene 4082766 4082900 . - . ID=gene-PUW31_19775;Name=PUW31_19775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19775 CP118128.1 Protein Homology CDS 4082766 4082900 . - 0 ID=cds-WJH08317.1;Parent=gene-PUW31_19775;Dbxref=NCBI_GP:WJH08317.1;Name=WJH08317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462467.1;locus_tag=PUW31_19775;product=hypothetical protein;protein_id=WJH08317.1;transl_table=11 CP118128.1 Genbank gene 4082878 4083261 . - . ID=gene-PUW31_19780;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=PUW31_19780 CP118128.1 Protein Homology CDS 4082878 4083261 . - 0 ID=cds-WJH08318.1;Parent=gene-PUW31_19780;Dbxref=NCBI_GP:WJH08318.1;Name=WJH08318.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462466.1;locus_tag=PUW31_19780;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WJH08318.1;transl_table=11 CP118128.1 Genbank gene 4083682 4084791 . + . ID=gene-PUW31_19785;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=PUW31_19785 CP118128.1 Protein Homology CDS 4083682 4084791 . + 0 ID=cds-WJH08319.1;Parent=gene-PUW31_19785;Dbxref=NCBI_GP:WJH08319.1;Name=WJH08319.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462465.1;locus_tag=PUW31_19785;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WJH08319.1;transl_table=11 CP118128.1 Genbank gene 4084851 4085777 . + . ID=gene-PUW31_19790;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=PUW31_19790 CP118128.1 Protein Homology CDS 4084851 4085777 . + 0 ID=cds-WJH08320.1;Parent=gene-PUW31_19790;Dbxref=NCBI_GP:WJH08320.1;Name=WJH08320.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=PUW31_19790;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WJH08320.1;transl_table=11 CP118128.1 Genbank gene 4085774 4087051 . + . ID=gene-PUW31_19795;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=PUW31_19795 CP118128.1 Protein Homology CDS 4085774 4087051 . + 0 ID=cds-WJH08321.1;Parent=gene-PUW31_19795;Dbxref=NCBI_GP:WJH08321.1;Name=WJH08321.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462463.1;locus_tag=PUW31_19795;product=branched chain amino acid ABC transporter permease LivM;protein_id=WJH08321.1;transl_table=11 CP118128.1 Genbank gene 4087048 4087815 . + . ID=gene-PUW31_19800;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=PUW31_19800 CP118128.1 Protein Homology CDS 4087048 4087815 . + 0 ID=cds-WJH08322.1;Parent=gene-PUW31_19800;Dbxref=NCBI_GP:WJH08322.1;Name=WJH08322.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=PUW31_19800;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WJH08322.1;transl_table=11 CP118128.1 Genbank gene 4087817 4088530 . + . ID=gene-PUW31_19805;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=PUW31_19805 CP118128.1 Protein Homology CDS 4087817 4088530 . + 0 ID=cds-WJH08323.1;Parent=gene-PUW31_19805;Dbxref=NCBI_GP:WJH08323.1;Name=WJH08323.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462461.1;locus_tag=PUW31_19805;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WJH08323.1;transl_table=11 CP118128.1 Genbank gene 4088661 4088882 . + . ID=gene-PUW31_19810;Name=PUW31_19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19810 CP118128.1 Protein Homology CDS 4088661 4088882 . + 0 ID=cds-WJH08324.1;Parent=gene-PUW31_19810;Dbxref=NCBI_GP:WJH08324.1;Name=WJH08324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229268.1;locus_tag=PUW31_19810;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WJH08324.1;transl_table=11 CP118128.1 Genbank gene 4088879 4089247 . + . ID=gene-PUW31_19815;Name=PUW31_19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19815 CP118128.1 Protein Homology CDS 4088879 4089247 . + 0 ID=cds-WJH08325.1;Parent=gene-PUW31_19815;Dbxref=NCBI_GP:WJH08325.1;Name=WJH08325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462459.1;locus_tag=PUW31_19815;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=WJH08325.1;transl_table=11 CP118128.1 Genbank gene 4089506 4090822 . + . ID=gene-PUW31_19820;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=PUW31_19820 CP118128.1 Protein Homology CDS 4089506 4090822 . + 0 ID=cds-WJH08326.1;Parent=gene-PUW31_19820;Dbxref=NCBI_GP:WJH08326.1;Name=WJH08326.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462458.1;locus_tag=PUW31_19820;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WJH08326.1;transl_table=11 CP118128.1 Genbank gene 4090927 4091814 . + . ID=gene-PUW31_19825;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=PUW31_19825 CP118128.1 Protein Homology CDS 4090927 4091814 . + 0 ID=cds-WJH08327.1;Parent=gene-PUW31_19825;Dbxref=NCBI_GP:WJH08327.1;Name=WJH08327.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=PUW31_19825;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WJH08327.1;transl_table=11 CP118128.1 Genbank gene 4091811 4092656 . + . ID=gene-PUW31_19830;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=PUW31_19830 CP118128.1 Protein Homology CDS 4091811 4092656 . + 0 ID=cds-WJH08328.1;Parent=gene-PUW31_19830;Dbxref=NCBI_GP:WJH08328.1;Name=WJH08328.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=PUW31_19830;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WJH08328.1;transl_table=11 CP118128.1 Genbank gene 4092658 4093728 . + . ID=gene-PUW31_19835;Name=PUW31_19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19835 CP118128.1 Protein Homology CDS 4092658 4093728 . + 0 ID=cds-WJH08329.1;Parent=gene-PUW31_19835;Dbxref=NCBI_GP:WJH08329.1;Name=WJH08329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462455.1;locus_tag=PUW31_19835;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WJH08329.1;transl_table=11 CP118128.1 Genbank gene 4093725 4094465 . + . ID=gene-PUW31_19840;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=PUW31_19840 CP118128.1 Protein Homology CDS 4093725 4094465 . + 0 ID=cds-WJH08330.1;Parent=gene-PUW31_19840;Dbxref=NCBI_GP:WJH08330.1;Name=WJH08330.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462454.1;locus_tag=PUW31_19840;product=glycerophosphodiester phosphodiesterase;protein_id=WJH08330.1;transl_table=11 CP118128.1 Genbank gene 4094478 4094894 . - . ID=gene-PUW31_19845;Name=PUW31_19845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19845 CP118128.1 Protein Homology CDS 4094478 4094894 . - 0 ID=cds-WJH08331.1;Parent=gene-PUW31_19845;Dbxref=NCBI_GP:WJH08331.1;Name=WJH08331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462453.1;locus_tag=PUW31_19845;product=DUF2756 family protein;protein_id=WJH08331.1;transl_table=11 CP118128.1 Genbank gene 4095020 4096762 . + . ID=gene-PUW31_19850;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=PUW31_19850 CP118128.1 Protein Homology CDS 4095020 4096762 . + 0 ID=cds-WJH08332.1;Parent=gene-PUW31_19850;Dbxref=NCBI_GP:WJH08332.1;Name=WJH08332.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462452.1;locus_tag=PUW31_19850;product=gamma-glutamyltransferase;protein_id=WJH08332.1;transl_table=11 CP118128.1 Genbank pseudogene 4096807 4097840 . - . ID=gene-PUW31_19855;Name=PUW31_19855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_19855;pseudo=true CP118128.1 Protein Homology CDS 4096807 4097840 . - 0 ID=cds-PUW31_19855;Parent=gene-PUW31_19855;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462451.1;locus_tag=PUW31_19855;product=phosphotriesterase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4097837 4098808 . - . ID=gene-PUW31_19860;Name=PUW31_19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19860 CP118128.1 Protein Homology CDS 4097837 4098808 . - 0 ID=cds-WJH08333.1;Parent=gene-PUW31_19860;Dbxref=NCBI_GP:WJH08333.1;Name=WJH08333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462450.1;locus_tag=PUW31_19860;product=DMT family transporter;protein_id=WJH08333.1;transl_table=11 CP118128.1 Genbank gene 4098862 4099623 . - . ID=gene-PUW31_19865;Name=PUW31_19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19865 CP118128.1 Protein Homology CDS 4098862 4099623 . - 0 ID=cds-WJH08334.1;Parent=gene-PUW31_19865;Dbxref=NCBI_GP:WJH08334.1;Name=WJH08334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462449.1;locus_tag=PUW31_19865;product=glutamine amidotransferase;protein_id=WJH08334.1;transl_table=11 CP118128.1 Genbank gene 4099639 4100853 . - . ID=gene-PUW31_19870;Name=PUW31_19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19870 CP118128.1 Protein Homology CDS 4099639 4100853 . - 0 ID=cds-WJH08335.1;Parent=gene-PUW31_19870;Dbxref=NCBI_GP:WJH08335.1;Name=WJH08335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462448.3;locus_tag=PUW31_19870;product=PfkB family carbohydrate kinase;protein_id=WJH08335.1;transl_table=11 CP118128.1 Genbank gene 4101118 4101606 . - . ID=gene-PUW31_19875;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=PUW31_19875 CP118128.1 Protein Homology CDS 4101118 4101606 . - 0 ID=cds-WJH08336.1;Parent=gene-PUW31_19875;Dbxref=NCBI_GP:WJH08336.1;Name=WJH08336.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462447.1;locus_tag=PUW31_19875;product=N-acetyltransferase;protein_id=WJH08336.1;transl_table=11 CP118128.1 Genbank gene 4102073 4103110 . + . ID=gene-PUW31_19880;Name=PUW31_19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19880 CP118128.1 Protein Homology CDS 4102073 4103110 . + 0 ID=cds-WJH08337.1;Parent=gene-PUW31_19880;Dbxref=NCBI_GP:WJH08337.1;Name=WJH08337.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462446.1;locus_tag=PUW31_19880;product=oxidoreductase;protein_id=WJH08337.1;transl_table=11 CP118128.1 Genbank gene 4103234 4103929 . + . ID=gene-PUW31_19885;Name=PUW31_19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19885 CP118128.1 Protein Homology CDS 4103234 4103929 . + 0 ID=cds-WJH08338.1;Parent=gene-PUW31_19885;Dbxref=NCBI_GP:WJH08338.1;Name=WJH08338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=PUW31_19885;product=pirin family protein;protein_id=WJH08338.1;transl_table=11 CP118128.1 Genbank gene 4104300 4105295 . + . ID=gene-PUW31_19890;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=PUW31_19890 CP118128.1 Protein Homology CDS 4104300 4105295 . + 0 ID=cds-WJH08339.1;Parent=gene-PUW31_19890;Dbxref=NCBI_GP:WJH08339.1;Name=WJH08339.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=PUW31_19890;product=gluconate operon transcriptional repressor GntR;protein_id=WJH08339.1;transl_table=11 CP118128.1 Genbank gene 4105434 4105967 . + . ID=gene-PUW31_19895;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=PUW31_19895 CP118128.1 Protein Homology CDS 4105434 4105967 . + 0 ID=cds-WJH08340.1;Parent=gene-PUW31_19895;Dbxref=NCBI_GP:WJH08340.1;Name=WJH08340.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462443.1;locus_tag=PUW31_19895;product=gluconokinase;protein_id=WJH08340.1;transl_table=11 CP118128.1 Genbank gene 4105964 4107304 . + . ID=gene-PUW31_19900;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=PUW31_19900 CP118128.1 Protein Homology CDS 4105964 4107304 . + 0 ID=cds-WJH08341.1;Parent=gene-PUW31_19900;Dbxref=NCBI_GP:WJH08341.1;Name=WJH08341.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462442.1;locus_tag=PUW31_19900;product=gluconate transporter;protein_id=WJH08341.1;transl_table=11 CP118128.1 Genbank pseudogene 4107227 4107601 . - . ID=gene-PUW31_19905;Name=PUW31_19905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_19905;pseudo=true CP118128.1 Protein Homology CDS 4107227 4107601 . - 0 ID=cds-PUW31_19905;Parent=gene-PUW31_19905;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_452851.1;locus_tag=PUW31_19905;product=MarC family protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 4107788 4108677 . + . ID=gene-PUW31_19910;Name=asd;gbkey=Gene;gene=asd;gene_biotype=pseudogene;locus_tag=PUW31_19910;pseudo=true CP118128.1 Protein Homology CDS 4107788 4108677 . + 0 ID=cds-PUW31_19910;Parent=gene-PUW31_19910;Note=frameshifted;Ontology_term=GO:0009089,GO:0004073;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: protein motif:HMM:NF005144.0;locus_tag=PUW31_19910;product=aspartate-semialdehyde dehydrogenase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4108599 4108832 . + . ID=gene-PUW31_19915;Name=PUW31_19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19915 CP118128.1 Protein Homology CDS 4108599 4108832 . + 0 ID=cds-WJH08342.1;Parent=gene-PUW31_19915;Dbxref=NCBI_GP:WJH08342.1;Name=WJH08342.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: protein motif:HMM:NF014793.2;locus_tag=PUW31_19915;product=Asd/ArgC dimerization domain-containing protein;protein_id=WJH08342.1;transl_table=11 CP118128.1 Genbank pseudogene 4109179 4111313 . + . ID=gene-PUW31_19920;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=pseudogene;locus_tag=PUW31_19920;pseudo=true CP118128.1 Protein Homology CDS 4109179 4111313 . + 0 ID=cds-PUW31_19920;Parent=gene-PUW31_19920;Note=frameshifted;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462439.1;locus_tag=PUW31_19920;product=1%2C4-alpha-glucan branching enzyme;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4111310 4113286 . + . ID=gene-PUW31_19925;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=PUW31_19925 CP118128.1 Protein Homology CDS 4111310 4113286 . + 0 ID=cds-WJH08343.1;Parent=gene-PUW31_19925;Dbxref=NCBI_GP:WJH08343.1;Name=WJH08343.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462438.1;locus_tag=PUW31_19925;product=glycogen debranching protein GlgX;protein_id=WJH08343.1;transl_table=11 CP118128.1 Genbank pseudogene 4113301 4114585 . + . ID=gene-PUW31_19930;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=pseudogene;locus_tag=PUW31_19930;pseudo=true CP118128.1 Protein Homology CDS 4113301 4114585 . + 0 ID=cds-PUW31_19930;Parent=gene-PUW31_19930;Note=frameshifted;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462437.1;locus_tag=PUW31_19930;product=glucose-1-phosphate adenylyltransferase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 4114585 4116020 . + . ID=gene-PUW31_19935;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=pseudogene;locus_tag=PUW31_19935;pseudo=true CP118128.1 Protein Homology CDS 4114585 4116020 . + 0 ID=cds-PUW31_19935;Parent=gene-PUW31_19935;Note=frameshifted;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=glycogen (starch) synthase activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462436.1;locus_tag=PUW31_19935;product=glycogen synthase GlgA;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4116040 4118487 . + . ID=gene-PUW31_19940;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=PUW31_19940 CP118128.1 Protein Homology CDS 4116040 4118487 . + 0 ID=cds-WJH08344.1;Parent=gene-PUW31_19940;Dbxref=NCBI_GP:WJH08344.1;Name=WJH08344.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436446.1;locus_tag=PUW31_19940;product=glycogen phosphorylase;protein_id=WJH08344.1;transl_table=11 CP118128.1 Genbank gene 4118665 4119420 . + . ID=gene-PUW31_19945;Name=PUW31_19945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19945 CP118128.1 Protein Homology CDS 4118665 4119420 . + 0 ID=cds-WJH08345.1;Parent=gene-PUW31_19945;Dbxref=NCBI_GP:WJH08345.1;Name=WJH08345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462434.1;locus_tag=PUW31_19945;product=IclR family transcriptional regulator;protein_id=WJH08345.1;transl_table=11 CP118128.1 Genbank pseudogene 4119464 4120368 . - . ID=gene-PUW31_19950;Name=PUW31_19950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_19950;pseudo=true CP118128.1 Protein Homology CDS 4119464 4120368 . - 0 ID=cds-PUW31_19950;Parent=gene-PUW31_19950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462433.1;locus_tag=PUW31_19950;product=dihydrodipicolinate synthase family protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4120412 4122127 . - . ID=gene-PUW31_19955;Name=PUW31_19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19955 CP118128.1 Protein Homology CDS 4120412 4122127 . - 0 ID=cds-WJH08346.1;Parent=gene-PUW31_19955;Dbxref=NCBI_GP:WJH08346.1;Name=WJH08346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462432.1;locus_tag=PUW31_19955;product=dihydroxy-acid dehydratase;protein_id=WJH08346.1;transl_table=11 CP118128.1 Genbank gene 4122124 4123458 . - . ID=gene-PUW31_19960;Name=PUW31_19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19960 CP118128.1 Protein Homology CDS 4122124 4123458 . - 0 ID=cds-WJH08347.1;Parent=gene-PUW31_19960;Dbxref=NCBI_GP:WJH08347.1;Name=WJH08347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001653833.1;locus_tag=PUW31_19960;product=MFS transporter;protein_id=WJH08347.1;transl_table=11 CP118128.1 Genbank gene 4123796 4124905 . + . ID=gene-PUW31_19965;Name=PUW31_19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19965 CP118128.1 Protein Homology CDS 4123796 4124905 . + 0 ID=cds-WJH08348.1;Parent=gene-PUW31_19965;Dbxref=NCBI_GP:WJH08348.1;Name=WJH08348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462431.1;locus_tag=PUW31_19965;product=glycerol dehydrogenase;protein_id=WJH08348.1;transl_table=11 CP118128.1 Genbank gene 4125063 4126559 . + . ID=gene-PUW31_19970;Name=PUW31_19970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19970 CP118128.1 Protein Homology CDS 4125063 4126559 . + 0 ID=cds-WJH08349.1;Parent=gene-PUW31_19970;Dbxref=NCBI_GP:WJH08349.1;Name=WJH08349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000786181.1;locus_tag=PUW31_19970;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WJH08349.1;transl_table=11 CP118128.1 Genbank gene 4126569 4127114 . + . ID=gene-PUW31_19975;Name=PUW31_19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19975 CP118128.1 Protein Homology CDS 4126569 4127114 . + 0 ID=cds-WJH08350.1;Parent=gene-PUW31_19975;Dbxref=NCBI_GP:WJH08350.1;Name=WJH08350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462429.1;locus_tag=PUW31_19975;product=hypothetical protein;protein_id=WJH08350.1;transl_table=11 CP118128.1 Genbank gene 4127161 4128669 . - . ID=gene-PUW31_19980;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=PUW31_19980 CP118128.1 Protein Homology CDS 4127161 4128669 . - 0 ID=cds-WJH08351.1;Parent=gene-PUW31_19980;Dbxref=NCBI_GP:WJH08351.1;Name=WJH08351.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462428.1;locus_tag=PUW31_19980;product=glycerol-3-phosphate dehydrogenase;protein_id=WJH08351.1;transl_table=11 CP118128.1 Genbank gene 4128868 4129194 . + . ID=gene-PUW31_19985;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=PUW31_19985 CP118128.1 Protein Homology CDS 4128868 4129194 . + 0 ID=cds-WJH08352.1;Parent=gene-PUW31_19985;Dbxref=NCBI_GP:WJH08352.1;Name=WJH08352.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462427.1;locus_tag=PUW31_19985;product=thiosulfate sulfurtransferase GlpE;protein_id=WJH08352.1;transl_table=11 CP118128.1 Genbank gene 4129270 4130100 . + . ID=gene-PUW31_19990;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=PUW31_19990 CP118128.1 Protein Homology CDS 4129270 4130100 . + 0 ID=cds-WJH08353.1;Parent=gene-PUW31_19990;Dbxref=NCBI_GP:WJH08353.1;Name=WJH08353.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462426.1;locus_tag=PUW31_19990;product=rhomboid family intramembrane serine protease GlpG;protein_id=WJH08353.1;transl_table=11 CP118128.1 Genbank gene 4130194 4130952 . + . ID=gene-PUW31_19995;Name=PUW31_19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_19995 CP118128.1 Protein Homology CDS 4130194 4130952 . + 0 ID=cds-WJH08354.1;Parent=gene-PUW31_19995;Dbxref=NCBI_GP:WJH08354.1;Name=WJH08354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=PUW31_19995;product=DeoR/GlpR family transcriptional regulator;protein_id=WJH08354.1;transl_table=11 CP118128.1 Genbank gene 4130949 4132532 . - . ID=gene-PUW31_20000;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;locus_tag=PUW31_20000 CP118128.1 Protein Homology CDS 4130949 4132532 . - 0 ID=cds-WJH08355.1;Parent=gene-PUW31_20000;Dbxref=NCBI_GP:WJH08355.1;Name=WJH08355.1;Ontology_term=GO:0006355,GO:0003700,GO:0005524,GO:0008134;gbkey=CDS;gene=rtcR;go_function=DNA-binding transcription factor activity|0003700||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462424.1;locus_tag=PUW31_20000;product=RNA repair transcriptional activator RtcR;protein_id=WJH08355.1;transl_table=11 CP118128.1 Genbank gene 4132722 4134275 . + . ID=gene-PUW31_20005;Name=PUW31_20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20005 CP118128.1 Protein Homology CDS 4132722 4134275 . + 0 ID=cds-WJH08356.1;Parent=gene-PUW31_20005;Dbxref=NCBI_GP:WJH08356.1;Name=WJH08356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462423.1;locus_tag=PUW31_20005;product=TROVE domain-containing protein;protein_id=WJH08356.1;transl_table=11 CP118128.1 Genbank gene 4134622 4135836 . + . ID=gene-PUW31_20010;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=protein_coding;locus_tag=PUW31_20010 CP118128.1 Protein Homology CDS 4134622 4135836 . + 0 ID=cds-WJH10796.1;Parent=gene-PUW31_20010;Dbxref=NCBI_GP:WJH10796.1;Name=WJH10796.1;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417879.1;locus_tag=PUW31_20010;product=RNA-splicing ligase RtcB;protein_id=WJH10796.1;transl_table=11 CP118128.1 Genbank gene 4135840 4136859 . + . ID=gene-PUW31_20015;Name=rtcA;gbkey=Gene;gene=rtcA;gene_biotype=protein_coding;locus_tag=PUW31_20015 CP118128.1 Protein Homology CDS 4135840 4136859 . + 0 ID=cds-WJH08357.1;Parent=gene-PUW31_20015;Dbxref=NCBI_GP:WJH08357.1;Name=WJH08357.1;Ontology_term=GO:0006396,GO:0003963;gbkey=CDS;gene=rtcA;go_function=RNA-3'-phosphate cyclase activity|0003963||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462421.1;locus_tag=PUW31_20015;product=RNA 3'-terminal phosphate cyclase;protein_id=WJH08357.1;transl_table=11 CP118128.1 Genbank gene 4136968 4137228 . + . ID=gene-PUW31_20020;Name=PUW31_20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20020 CP118128.1 Protein Homology CDS 4136968 4137228 . + 0 ID=cds-WJH08358.1;Parent=gene-PUW31_20020;Dbxref=NCBI_GP:WJH08358.1;Name=WJH08358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462420.1;locus_tag=PUW31_20020;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WJH08358.1;transl_table=11 CP118128.1 Genbank gene 4137231 4137506 . + . ID=gene-PUW31_20025;Name=PUW31_20025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20025 CP118128.1 Protein Homology CDS 4137231 4137506 . + 0 ID=cds-WJH08359.1;Parent=gene-PUW31_20025;Dbxref=NCBI_GP:WJH08359.1;Name=WJH08359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462419.1;locus_tag=PUW31_20025;product=type II toxin-antitoxin system YafQ family toxin;protein_id=WJH08359.1;transl_table=11 CP118128.1 Genbank gene 4137594 4140299 . - . ID=gene-PUW31_20030;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=PUW31_20030 CP118128.1 Protein Homology CDS 4137594 4140299 . - 0 ID=cds-WJH08360.1;Parent=gene-PUW31_20030;Dbxref=NCBI_GP:WJH08360.1;Name=WJH08360.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=PUW31_20030;product=HTH-type transcriptional regulator MalT;protein_id=WJH08360.1;transl_table=11 CP118128.1 Genbank gene 4140893 4143286 . + . ID=gene-PUW31_20035;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=PUW31_20035 CP118128.1 Protein Homology CDS 4140893 4143286 . + 0 ID=cds-WJH08361.1;Parent=gene-PUW31_20035;Dbxref=NCBI_GP:WJH08361.1;Name=WJH08361.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462417.1;locus_tag=PUW31_20035;product=maltodextrin phosphorylase;protein_id=WJH08361.1;transl_table=11 CP118128.1 Genbank gene 4143296 4145374 . + . ID=gene-PUW31_20040;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=PUW31_20040 CP118128.1 Protein Homology CDS 4143296 4145374 . + 0 ID=cds-WJH08362.1;Parent=gene-PUW31_20040;Dbxref=NCBI_GP:WJH08362.1;Name=WJH08362.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462416.1;locus_tag=PUW31_20040;product=4-alpha-glucanotransferase;protein_id=WJH08362.1;transl_table=11 CP118128.1 Genbank pseudogene 4145493 4146808 . - . ID=gene-PUW31_20045;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=pseudogene;locus_tag=PUW31_20045;pseudo=true CP118128.1 Protein Homology CDS 4145493 4146808 . - 0 ID=cds-PUW31_20045;Parent=gene-PUW31_20045;Note=frameshifted;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462415.1;locus_tag=PUW31_20045;product=gluconate transporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4147185 4147760 . - . ID=gene-PUW31_20050;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=PUW31_20050 CP118128.1 Protein Homology CDS 4147185 4147760 . - 0 ID=cds-WJH08363.1;Parent=gene-PUW31_20050;Dbxref=NCBI_GP:WJH08363.1;Name=WJH08363.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=PUW31_20050;product=Fe-S biogenesis protein NfuA;protein_id=WJH08363.1;transl_table=11 CP118128.1 Genbank gene 4147819 4148502 . - . ID=gene-PUW31_20055;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=PUW31_20055 CP118128.1 Protein Homology CDS 4147819 4148502 . - 0 ID=cds-WJH08364.1;Parent=gene-PUW31_20055;Dbxref=NCBI_GP:WJH08364.1;Name=WJH08364.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462413.1;locus_tag=PUW31_20055;product=DNA utilization protein GntX;protein_id=WJH08364.1;transl_table=11 CP118128.1 Genbank gene 4148540 4149310 . + . ID=gene-PUW31_20060;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=PUW31_20060 CP118128.1 Protein Homology CDS 4148540 4149310 . + 0 ID=cds-WJH08365.1;Parent=gene-PUW31_20060;Dbxref=NCBI_GP:WJH08365.1;Name=WJH08365.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462412.1;locus_tag=PUW31_20060;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WJH08365.1;transl_table=11 CP118128.1 Genbank gene 4149346 4150272 . - . ID=gene-PUW31_20065;Name=PUW31_20065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20065 CP118128.1 Protein Homology CDS 4149346 4150272 . - 0 ID=cds-WJH08366.1;Parent=gene-PUW31_20065;Dbxref=NCBI_GP:WJH08366.1;Name=WJH08366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462411.1;locus_tag=PUW31_20065;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WJH08366.1;transl_table=11 CP118128.1 Genbank gene 4150507 4150743 . - . ID=gene-PUW31_20070;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=PUW31_20070 CP118128.1 Protein Homology CDS 4150507 4150743 . - 0 ID=cds-WJH08367.1;Parent=gene-PUW31_20070;Dbxref=NCBI_GP:WJH08367.1;Name=WJH08367.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462410.1;locus_tag=PUW31_20070;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WJH08367.1;transl_table=11 CP118128.1 Genbank pseudogene 4150756 4153073 . - . ID=gene-PUW31_20075;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=pseudogene;locus_tag=PUW31_20075;pseudo=true CP118128.1 Protein Homology CDS 4150756 4153073 . - 0 ID=cds-PUW31_20075;Parent=gene-PUW31_20075;Note=frameshifted;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462409.1;locus_tag=PUW31_20075;product=Fe(2+) transporter permease subunit FeoB;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4153092 4153319 . - . ID=gene-PUW31_20080;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=PUW31_20080 CP118128.1 Protein Homology CDS 4153092 4153319 . - 0 ID=cds-WJH08368.1;Parent=gene-PUW31_20080;Dbxref=NCBI_GP:WJH08368.1;Name=WJH08368.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462408.1;locus_tag=PUW31_20080;product=ferrous iron transporter A;protein_id=WJH08368.1;transl_table=11 CP118128.1 Genbank gene 4153756 4156086 . - . ID=gene-PUW31_20085;Name=PUW31_20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20085 CP118128.1 Protein Homology CDS 4153756 4156086 . - 0 ID=cds-WJH08369.1;Parent=gene-PUW31_20085;Dbxref=NCBI_GP:WJH08369.1;Name=WJH08369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312276.2;locus_tag=PUW31_20085;product=Tex family protein;protein_id=WJH08369.1;transl_table=11 CP118128.1 Genbank gene 4156185 4156658 . - . ID=gene-PUW31_20090;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=PUW31_20090 CP118128.1 Protein Homology CDS 4156185 4156658 . - 0 ID=cds-WJH08370.1;Parent=gene-PUW31_20090;Dbxref=NCBI_GP:WJH08370.1;Name=WJH08370.1;Ontology_term=GO:0006354,GO:0003711;gbkey=CDS;gene=greB;go_function=transcription elongation factor activity|0003711||IEA;go_process=DNA-templated transcription elongation|0006354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703675.1;locus_tag=PUW31_20090;product=transcription elongation factor GreB;protein_id=WJH08370.1;transl_table=11 CP118128.1 Genbank gene 4156884 4157318 . + . ID=gene-PUW31_20095;Name=PUW31_20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20095 CP118128.1 Protein Homology CDS 4156884 4157318 . + 0 ID=cds-WJH08371.1;Parent=gene-PUW31_20095;Dbxref=NCBI_GP:WJH08371.1;Name=WJH08371.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=PUW31_20095;product=response regulator;protein_id=WJH08371.1;transl_table=11 CP118128.1 Genbank gene 4157336 4157602 . + . ID=gene-PUW31_20100;Name=PUW31_20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20100 CP118128.1 Protein Homology CDS 4157336 4157602 . + 0 ID=cds-WJH08372.1;Parent=gene-PUW31_20100;Dbxref=NCBI_GP:WJH08372.1;Name=WJH08372.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002423495.1;locus_tag=PUW31_20100;product=winged helix-turn-helix domain-containing protein;protein_id=WJH08372.1;transl_table=11 CP118128.1 Genbank gene 4157599 4158951 . + . ID=gene-PUW31_20105;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=PUW31_20105 CP118128.1 Protein Homology CDS 4157599 4158951 . + 0 ID=cds-WJH08373.1;Parent=gene-PUW31_20105;Dbxref=NCBI_GP:WJH08373.1;Name=WJH08373.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462404.1;locus_tag=PUW31_20105;product=two-component system sensor histidine kinase EnvZ;protein_id=WJH08373.1;transl_table=11 CP118128.1 Genbank gene 4159026 4160645 . - . ID=gene-PUW31_20110;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=PUW31_20110 CP118128.1 Protein Homology CDS 4159026 4160645 . - 0 ID=cds-WJH08374.1;Parent=gene-PUW31_20110;Dbxref=NCBI_GP:WJH08374.1;Name=WJH08374.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462403.2;locus_tag=PUW31_20110;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WJH08374.1;transl_table=11 CP118128.1 Genbank gene 4161025 4162734 . + . ID=gene-PUW31_20115;Name=PUW31_20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20115 CP118128.1 Protein Homology CDS 4161025 4162734 . + 0 ID=cds-WJH08375.1;Parent=gene-PUW31_20115;Dbxref=NCBI_GP:WJH08375.1;Name=WJH08375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462402.1;locus_tag=PUW31_20115;product=DUF4153 domain-containing protein;protein_id=WJH08375.1;transl_table=11 CP118128.1 Genbank gene 4162843 4163721 . - . ID=gene-PUW31_20120;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=PUW31_20120 CP118128.1 Protein Homology CDS 4162843 4163721 . - 0 ID=cds-WJH08376.1;Parent=gene-PUW31_20120;Dbxref=NCBI_GP:WJH08376.1;Name=WJH08376.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=PUW31_20120;product=Hsp33 family molecular chaperone HslO;protein_id=WJH08376.1;transl_table=11 CP118128.1 Genbank gene 4163746 4164147 . - . ID=gene-PUW31_20125;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=PUW31_20125 CP118128.1 Protein Homology CDS 4163746 4164147 . - 0 ID=cds-WJH08377.1;Parent=gene-PUW31_20125;Dbxref=NCBI_GP:WJH08377.1;Name=WJH08377.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462400.1;locus_tag=PUW31_20125;product=ribosome-associated heat shock protein Hsp15;protein_id=WJH08377.1;transl_table=11 CP118128.1 Genbank gene 4164158 4164826 . - . ID=gene-PUW31_20130;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=PUW31_20130 CP118128.1 Protein Homology CDS 4164158 4164826 . - 0 ID=cds-WJH08378.1;Parent=gene-PUW31_20130;Dbxref=NCBI_GP:WJH08378.1;Name=WJH08378.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462399.1;locus_tag=PUW31_20130;product=GMP/IMP nucleotidase;protein_id=WJH08378.1;transl_table=11 CP118128.1 Genbank gene 4164891 4167023 . - . ID=gene-PUW31_20135;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=PUW31_20135 CP118128.1 Protein Homology CDS 4164891 4167023 . - 0 ID=cds-WJH08379.1;Parent=gene-PUW31_20135;Dbxref=NCBI_GP:WJH08379.1;Name=WJH08379.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462398.1;locus_tag=PUW31_20135;product=intracellular growth attenuator protein IgaA;protein_id=WJH08379.1;transl_table=11 CP118128.1 Genbank gene 4167346 4167909 . + . ID=gene-PUW31_20140;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=PUW31_20140 CP118128.1 Protein Homology CDS 4167346 4167909 . + 0 ID=cds-WJH08380.1;Parent=gene-PUW31_20140;Dbxref=NCBI_GP:WJH08380.1;Name=WJH08380.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000045725.1;locus_tag=PUW31_20140;product=ADP compounds hydrolase NudE;protein_id=WJH08380.1;transl_table=11 CP118128.1 Genbank pseudogene 4168005 4170556 . - . ID=gene-PUW31_20145;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=pseudogene;locus_tag=PUW31_20145;pseudo=true CP118128.1 Protein Homology CDS 4168005 4170556 . - 0 ID=cds-PUW31_20145;Parent=gene-PUW31_20145;Note=frameshifted;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=PUW31_20145;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4170677 4171456 . + . ID=gene-PUW31_20150;Name=PUW31_20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20150 CP118128.1 Protein Homology CDS 4170677 4171456 . + 0 ID=cds-WJH08381.1;Parent=gene-PUW31_20150;Dbxref=NCBI_GP:WJH08381.1;Name=WJH08381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462395.1;locus_tag=PUW31_20150;product=DNA utilization protein HofM;protein_id=WJH08381.1;transl_table=11 CP118128.1 Genbank gene 4171456 4171995 . + . ID=gene-PUW31_20155;Name=PUW31_20155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20155 CP118128.1 Protein Homology CDS 4171456 4171995 . + 0 ID=cds-WJH08382.1;Parent=gene-PUW31_20155;Dbxref=NCBI_GP:WJH08382.1;Name=WJH08382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462394.1;locus_tag=PUW31_20155;product=PilN domain-containing protein;protein_id=WJH08382.1;transl_table=11 CP118128.1 Genbank gene 4171979 4172452 . + . ID=gene-PUW31_20160;Name=PUW31_20160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20160 CP118128.1 Protein Homology CDS 4171979 4172452 . + 0 ID=cds-WJH08383.1;Parent=gene-PUW31_20160;Dbxref=NCBI_GP:WJH08383.1;Name=WJH08383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462393.1;locus_tag=PUW31_20160;product=hypothetical protein;protein_id=WJH08383.1;transl_table=11 CP118128.1 Genbank gene 4172442 4172843 . + . ID=gene-PUW31_20165;Name=PUW31_20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20165 CP118128.1 Protein Homology CDS 4172442 4172843 . + 0 ID=cds-WJH08384.1;Parent=gene-PUW31_20165;Dbxref=NCBI_GP:WJH08384.1;Name=WJH08384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462392.1;locus_tag=PUW31_20165;product=DUF2531 family protein;protein_id=WJH08384.1;transl_table=11 CP118128.1 Genbank pseudogene 4172758 4173993 . + . ID=gene-PUW31_20170;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=pseudogene;locus_tag=PUW31_20170;pseudo=true CP118128.1 Protein Homology CDS 4172758 4173993 . + 0 ID=cds-PUW31_20170;Parent=gene-PUW31_20170;Note=frameshifted;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462391.1;locus_tag=PUW31_20170;product=DNA uptake porin HofQ;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4174458 4174979 . + . ID=gene-PUW31_20175;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=PUW31_20175 CP118128.1 Protein Homology CDS 4174458 4174979 . + 0 ID=cds-WJH08385.1;Parent=gene-PUW31_20175;Dbxref=NCBI_GP:WJH08385.1;Name=WJH08385.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=PUW31_20175;product=shikimate kinase AroK;protein_id=WJH08385.1;transl_table=11 CP118128.1 Genbank gene 4175036 4176124 . + . ID=gene-PUW31_20180;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=PUW31_20180 CP118128.1 Protein Homology CDS 4175036 4176124 . + 0 ID=cds-WJH08386.1;Parent=gene-PUW31_20180;Dbxref=NCBI_GP:WJH08386.1;Name=WJH08386.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462389.1;locus_tag=PUW31_20180;product=3-dehydroquinate synthase;protein_id=WJH08386.1;transl_table=11 CP118128.1 Genbank gene 4176222 4177499 . + . ID=gene-PUW31_20185;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=PUW31_20185 CP118128.1 Protein Homology CDS 4176222 4177499 . + 0 ID=cds-WJH08387.1;Parent=gene-PUW31_20185;Dbxref=NCBI_GP:WJH08387.1;Name=WJH08387.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462388.1;locus_tag=PUW31_20185;product=cell division protein DamX;protein_id=WJH08387.1;transl_table=11 CP118128.1 Genbank pseudogene 4177682 4178515 . + . ID=gene-PUW31_20190;Name=dam;gbkey=Gene;gene=dam;gene_biotype=pseudogene;locus_tag=PUW31_20190;pseudo=true CP118128.1 Protein Homology CDS 4177682 4178515 . + 0 ID=cds-PUW31_20190;Parent=gene-PUW31_20190;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0032775,GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462387.1;locus_tag=PUW31_20190;product=adenine-specific DNA-methyltransferase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4178533 4179210 . + . ID=gene-PUW31_20195;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=PUW31_20195 CP118128.1 Protein Homology CDS 4178533 4179210 . + 0 ID=cds-WJH08388.1;Parent=gene-PUW31_20195;Dbxref=NCBI_GP:WJH08388.1;Name=WJH08388.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462386.1;locus_tag=PUW31_20195;product=ribulose-phosphate 3-epimerase;protein_id=WJH08388.1;transl_table=11 CP118128.1 Genbank gene 4179203 4179961 . + . ID=gene-PUW31_20200;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=PUW31_20200 CP118128.1 Protein Homology CDS 4179203 4179961 . + 0 ID=cds-WJH08389.1;Parent=gene-PUW31_20200;Dbxref=NCBI_GP:WJH08389.1;Name=WJH08389.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462385.1;locus_tag=PUW31_20200;product=phosphoglycolate phosphatase;protein_id=WJH08389.1;transl_table=11 CP118128.1 Genbank gene 4179954 4180958 . + . ID=gene-PUW31_20205;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=PUW31_20205 CP118128.1 Protein Homology CDS 4179954 4180958 . + 0 ID=cds-WJH08390.1;Parent=gene-PUW31_20205;Dbxref=NCBI_GP:WJH08390.1;Name=WJH08390.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462384.1;locus_tag=PUW31_20205;product=tryptophan--tRNA ligase;protein_id=WJH08390.1;transl_table=11 CP118128.1 Genbank gene 4181102 4181272 . - . ID=gene-PUW31_20210;Name=PUW31_20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20210 CP118128.1 Protein Homology CDS 4181102 4181272 . - 0 ID=cds-WJH08391.1;Parent=gene-PUW31_20210;Dbxref=NCBI_GP:WJH08391.1;Name=WJH08391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462383.1;locus_tag=PUW31_20210;product=YhfL family protein;protein_id=WJH08391.1;transl_table=11 CP118128.1 Genbank pseudogene 4181465 4187236 . - . ID=gene-PUW31_20215;Name=bigA;gbkey=Gene;gene=bigA;gene_biotype=pseudogene;locus_tag=PUW31_20215;pseudo=true CP118128.1 Protein Homology CDS 4181465 4187236 . - 0 ID=cds-PUW31_20215;Parent=gene-PUW31_20215;Note=frameshifted;gbkey=CDS;gene=bigA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462381.1;locus_tag=PUW31_20215;product=autotransporter adhesin BigA;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 4187565 4188937 . - . ID=gene-PUW31_20220;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=pseudogene;locus_tag=PUW31_20220;pseudo=true CP118128.1 Protein Homology CDS 4187565 4188937 . - 0 ID=cds-PUW31_20220;Parent=gene-PUW31_20220;Note=frameshifted;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462380.1;locus_tag=PUW31_20220;product=siroheme synthase CysG;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4188949 4189758 . - . ID=gene-PUW31_20225;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=PUW31_20225 CP118128.1 Protein Homology CDS 4188949 4189758 . - 0 ID=cds-WJH08392.1;Parent=gene-PUW31_20225;Dbxref=NCBI_GP:WJH08392.1;Name=WJH08392.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442185.1;locus_tag=PUW31_20225;product=nitrite transporter NirC;protein_id=WJH08392.1;transl_table=11 CP118128.1 Genbank gene 4189953 4190279 . - . ID=gene-PUW31_20230;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=PUW31_20230 CP118128.1 Protein Homology CDS 4189953 4190279 . - 0 ID=cds-WJH08393.1;Parent=gene-PUW31_20230;Dbxref=NCBI_GP:WJH08393.1;Name=WJH08393.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462378.1;locus_tag=PUW31_20230;product=nitrite reductase small subunit NirD;protein_id=WJH08393.1;transl_table=11 CP118128.1 Genbank gene 4190276 4192819 . - . ID=gene-PUW31_20235;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=PUW31_20235 CP118128.1 Protein Homology CDS 4190276 4192819 . - 0 ID=cds-WJH08394.1;Parent=gene-PUW31_20235;Dbxref=NCBI_GP:WJH08394.1;Name=WJH08394.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=PUW31_20235;product=NADPH-nitrite reductase large subunit;protein_id=WJH08394.1;transl_table=11 CP118128.1 Genbank gene 4193082 4194263 . - . ID=gene-PUW31_20240;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=PUW31_20240 CP118128.1 Protein Homology CDS 4193082 4194263 . - 0 ID=cds-WJH08395.1;Parent=gene-PUW31_20240;Dbxref=NCBI_GP:WJH08395.1;Name=WJH08395.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462376.1;locus_tag=PUW31_20240;product=MFS transporter TsgA;protein_id=WJH08395.1;transl_table=11 CP118128.1 Genbank gene 4194540 4195112 . + . ID=gene-PUW31_20245;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=PUW31_20245 CP118128.1 Protein Homology CDS 4194540 4195112 . + 0 ID=cds-WJH08396.1;Parent=gene-PUW31_20245;Dbxref=NCBI_GP:WJH08396.1;Name=WJH08396.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462375.1;locus_tag=PUW31_20245;product=peptidylprolyl isomerase A;protein_id=WJH08396.1;transl_table=11 CP118128.1 Genbank gene 4195221 4195388 . + . ID=gene-PUW31_20250;Name=PUW31_20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20250 CP118128.1 Protein Homology CDS 4195221 4195388 . + 0 ID=cds-WJH08397.1;Parent=gene-PUW31_20250;Dbxref=NCBI_GP:WJH08397.1;Name=WJH08397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462374.1;locus_tag=PUW31_20250;product=YhfG family protein;protein_id=WJH08397.1;transl_table=11 CP118128.1 Genbank gene 4195378 4195980 . + . ID=gene-PUW31_20255;Name=PUW31_20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20255 CP118128.1 Protein Homology CDS 4195378 4195980 . + 0 ID=cds-WJH08398.1;Parent=gene-PUW31_20255;Dbxref=NCBI_GP:WJH08398.1;Name=WJH08398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462373.1;locus_tag=PUW31_20255;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WJH08398.1;transl_table=11 CP118128.1 Genbank gene 4196012 4196575 . + . ID=gene-PUW31_20260;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=PUW31_20260 CP118128.1 Protein Homology CDS 4196012 4196575 . + 0 ID=cds-WJH08399.1;Parent=gene-PUW31_20260;Dbxref=NCBI_GP:WJH08399.1;Name=WJH08399.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462372.1;locus_tag=PUW31_20260;product=aminodeoxychorismate synthase component 2;protein_id=WJH08399.1;transl_table=11 CP118128.1 Genbank gene 4196661 4197878 . + . ID=gene-PUW31_20265;Name=PUW31_20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20265 CP118128.1 Protein Homology CDS 4196661 4197878 . + 0 ID=cds-WJH08400.1;Parent=gene-PUW31_20265;Dbxref=NCBI_GP:WJH08400.1;Name=WJH08400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462371.1;locus_tag=PUW31_20265;product=aspartate aminotransferase family protein;protein_id=WJH08400.1;transl_table=11 CP118128.1 Genbank gene 4197921 4200008 . - . ID=gene-PUW31_20270;Name=PUW31_20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20270 CP118128.1 Protein Homology CDS 4197921 4200008 . - 0 ID=cds-WJH10797.1;Parent=gene-PUW31_20270;Dbxref=NCBI_GP:WJH10797.1;Name=WJH10797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312236.3;locus_tag=PUW31_20270;product=YccS/YhfK family putative transporter;protein_id=WJH10797.1;transl_table=11 CP118128.1 Genbank gene 4200057 4200689 . - . ID=gene-PUW31_20275;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=PUW31_20275 CP118128.1 Protein Homology CDS 4200057 4200689 . - 0 ID=cds-WJH08401.1;Parent=gene-PUW31_20275;Dbxref=NCBI_GP:WJH08401.1;Name=WJH08401.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=PUW31_20275;product=cAMP-activated global transcriptional regulator CRP;protein_id=WJH08401.1;transl_table=11 CP118128.1 Genbank gene 4200997 4201401 . + . ID=gene-PUW31_20280;Name=PUW31_20280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20280 CP118128.1 Protein Homology CDS 4200997 4201401 . + 0 ID=cds-WJH08402.1;Parent=gene-PUW31_20280;Dbxref=NCBI_GP:WJH08402.1;Name=WJH08402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462368.1;locus_tag=PUW31_20280;product=OsmC family protein;protein_id=WJH08402.1;transl_table=11 CP118128.1 Genbank gene 4201438 4202367 . - . ID=gene-PUW31_20285;Name=PUW31_20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20285 CP118128.1 Protein Homology CDS 4201438 4202367 . - 0 ID=cds-WJH08403.1;Parent=gene-PUW31_20285;Dbxref=NCBI_GP:WJH08403.1;Name=WJH08403.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001274691.1;locus_tag=PUW31_20285;product=phosphoribulokinase;protein_id=WJH08403.1;transl_table=11 CP118128.1 Genbank pseudogene 4202418 4202635 . - . ID=gene-PUW31_20290;Name=PUW31_20290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_20290;pseudo=true CP118128.1 Protein Homology CDS 4202418 4202635 . - 0 ID=cds-PUW31_20290;Parent=gene-PUW31_20290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=PUW31_20290;product=YheU family protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4202632 4203699 . - . ID=gene-PUW31_20295;Name=PUW31_20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20295 CP118128.1 Protein Homology CDS 4202632 4203699 . - 0 ID=cds-WJH08404.1;Parent=gene-PUW31_20295;Dbxref=NCBI_GP:WJH08404.1;Name=WJH08404.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462365.1;locus_tag=PUW31_20295;product=hydrolase;protein_id=WJH08404.1;transl_table=11 CP118128.1 Genbank gene 4203897 4204208 . + . ID=gene-PUW31_20300;Name=PUW31_20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20300 CP118128.1 Protein Homology CDS 4203897 4204208 . + 0 ID=cds-WJH08405.1;Parent=gene-PUW31_20300;Dbxref=NCBI_GP:WJH08405.1;Name=WJH08405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462364.1;locus_tag=PUW31_20300;product=monooxygenase;protein_id=WJH08405.1;transl_table=11 CP118128.1 Genbank gene 4204210 4204431 . - . ID=gene-PUW31_20305;Name=PUW31_20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20305 CP118128.1 Protein Homology CDS 4204210 4204431 . - 0 ID=cds-WJH08406.1;Parent=gene-PUW31_20305;Dbxref=NCBI_GP:WJH08406.1;Name=WJH08406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054026.1;locus_tag=PUW31_20305;product=LysR family transcriptional regulator;protein_id=WJH08406.1;transl_table=11 CP118128.1 Genbank gene 4204594 4206501 . - . ID=gene-PUW31_20310;Name=PUW31_20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20310 CP118128.1 Protein Homology CDS 4204594 4206501 . - 0 ID=cds-WJH08407.1;Parent=gene-PUW31_20310;Dbxref=NCBI_GP:WJH08407.1;Name=WJH08407.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462363.1;locus_tag=PUW31_20310;product=ABC transporter ATP-binding protein;protein_id=WJH08407.1;transl_table=11 CP118128.1 Genbank gene 4206767 4207318 . + . ID=gene-PUW31_20315;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=PUW31_20315 CP118128.1 Protein Homology CDS 4206767 4207318 . + 0 ID=cds-WJH08408.1;Parent=gene-PUW31_20315;Dbxref=NCBI_GP:WJH08408.1;Name=WJH08408.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462362.1;locus_tag=PUW31_20315;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WJH08408.1;transl_table=11 CP118128.1 Genbank pseudogene 4207318 4209124 . + . ID=gene-PUW31_20320;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=pseudogene;locus_tag=PUW31_20320;pseudo=true CP118128.1 Protein Homology CDS 4207318 4209124 . + 0 ID=cds-PUW31_20320;Parent=gene-PUW31_20320;Note=frameshifted;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462361.1;locus_tag=PUW31_20320;product=glutathione-regulated potassium-efflux system protein KefB;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4209134 4209334 . + . ID=gene-PUW31_20325;Name=PUW31_20325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20325 CP118128.1 Protein Homology CDS 4209134 4209334 . + 0 ID=cds-WJH08409.1;Parent=gene-PUW31_20325;Dbxref=NCBI_GP:WJH08409.1;Name=WJH08409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462360.1;locus_tag=PUW31_20325;product=YheV family putative zinc ribbon protein;protein_id=WJH08409.1;transl_table=11 CP118128.1 Genbank gene 4209429 4210019 . + . ID=gene-PUW31_20330;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=PUW31_20330 CP118128.1 Protein Homology CDS 4209429 4210019 . + 0 ID=cds-WJH08410.1;Parent=gene-PUW31_20330;Dbxref=NCBI_GP:WJH08410.1;Name=WJH08410.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462359.1;locus_tag=PUW31_20330;product=peptidylprolyl isomerase;protein_id=WJH08410.1;transl_table=11 CP118128.1 Genbank gene 4210208 4210426 . - . ID=gene-PUW31_20335;Name=PUW31_20335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20335 CP118128.1 Protein Homology CDS 4210208 4210426 . - 0 ID=cds-WJH08411.1;Parent=gene-PUW31_20335;Dbxref=NCBI_GP:WJH08411.1;Name=WJH08411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462358.1;locus_tag=PUW31_20335;product=SlyX family protein;protein_id=WJH08411.1;transl_table=11 CP118128.1 Genbank gene 4210646 4211464 . + . ID=gene-PUW31_20340;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=PUW31_20340 CP118128.1 Protein Homology CDS 4210646 4211464 . + 0 ID=cds-WJH08412.1;Parent=gene-PUW31_20340;Dbxref=NCBI_GP:WJH08412.1;Name=WJH08412.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462357.1;locus_tag=PUW31_20340;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WJH08412.1;transl_table=11 CP118128.1 Genbank gene 4211740 4212462 . + . ID=gene-PUW31_20345;Name=PUW31_20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20345 CP118128.1 Protein Homology CDS 4211740 4212462 . + 0 ID=cds-WJH08413.1;Parent=gene-PUW31_20345;Dbxref=NCBI_GP:WJH08413.1;Name=WJH08413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462356.1;locus_tag=PUW31_20345;product=transcriptional regulator;protein_id=WJH08413.1;transl_table=11 CP118128.1 Genbank gene 4212462 4212848 . + . ID=gene-PUW31_20350;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=PUW31_20350 CP118128.1 Protein Homology CDS 4212462 4212848 . + 0 ID=cds-WJH08414.1;Parent=gene-PUW31_20350;Dbxref=NCBI_GP:WJH08414.1;Name=WJH08414.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462355.1;locus_tag=PUW31_20350;product=sulfurtransferase complex subunit TusD;protein_id=WJH08414.1;transl_table=11 CP118128.1 Genbank gene 4212848 4213204 . + . ID=gene-PUW31_20355;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=PUW31_20355 CP118128.1 Protein Homology CDS 4212848 4213204 . + 0 ID=cds-WJH08415.1;Parent=gene-PUW31_20355;Dbxref=NCBI_GP:WJH08415.1;Name=WJH08415.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462354.1;locus_tag=PUW31_20355;product=sulfurtransferase complex subunit TusC;protein_id=WJH08415.1;transl_table=11 CP118128.1 Genbank gene 4213212 4213499 . + . ID=gene-PUW31_20360;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=PUW31_20360 CP118128.1 Protein Homology CDS 4213212 4213499 . + 0 ID=cds-WJH08416.1;Parent=gene-PUW31_20360;Dbxref=NCBI_GP:WJH08416.1;Name=WJH08416.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462353.1;locus_tag=PUW31_20360;product=sulfurtransferase complex subunit TusB;protein_id=WJH08416.1;transl_table=11 CP118128.1 Genbank gene 4213625 4213999 . + . ID=gene-PUW31_20365;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=PUW31_20365 CP118128.1 Protein Homology CDS 4213625 4213999 . + 0 ID=cds-WJH08417.1;Parent=gene-PUW31_20365;Dbxref=NCBI_GP:WJH08417.1;Name=WJH08417.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=PUW31_20365;product=30S ribosomal protein S12;protein_id=WJH08417.1;transl_table=11 CP118128.1 Genbank gene 4214095 4214565 . + . ID=gene-PUW31_20370;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=PUW31_20370 CP118128.1 Protein Homology CDS 4214095 4214565 . + 0 ID=cds-WJH08418.1;Parent=gene-PUW31_20370;Dbxref=NCBI_GP:WJH08418.1;Name=WJH08418.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=PUW31_20370;product=30S ribosomal protein S7;protein_id=WJH08418.1;transl_table=11 CP118128.1 Genbank gene 4214662 4216776 . + . ID=gene-PUW31_20375;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=PUW31_20375 CP118128.1 Protein Homology CDS 4214662 4216776 . + 0 ID=cds-WJH08419.1;Parent=gene-PUW31_20375;Dbxref=NCBI_GP:WJH08419.1;Name=WJH08419.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=PUW31_20375;product=elongation factor G;protein_id=WJH08419.1;transl_table=11 CP118128.1 Genbank gene 4216848 4218032 . + . ID=gene-PUW31_20380;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=PUW31_20380 CP118128.1 Protein Homology CDS 4216848 4218032 . + 0 ID=cds-WJH08420.1;Parent=gene-PUW31_20380;Dbxref=NCBI_GP:WJH08420.1;Name=WJH08420.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=PUW31_20380;product=elongation factor Tu;protein_id=WJH08420.1;transl_table=11 CP118128.1 Genbank gene 4218217 4218411 . + . ID=gene-PUW31_20385;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=PUW31_20385 CP118128.1 Protein Homology CDS 4218217 4218411 . + 0 ID=cds-WJH08421.1;Parent=gene-PUW31_20385;Dbxref=NCBI_GP:WJH08421.1;Name=WJH08421.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462348.1;locus_tag=PUW31_20385;product=bacterioferritin-associated ferredoxin;protein_id=WJH08421.1;transl_table=11 CP118128.1 Genbank gene 4218484 4218960 . + . ID=gene-PUW31_20390;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=PUW31_20390 CP118128.1 Protein Homology CDS 4218484 4218960 . + 0 ID=cds-WJH08422.1;Parent=gene-PUW31_20390;Dbxref=NCBI_GP:WJH08422.1;Name=WJH08422.1;Ontology_term=GO:0006880,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular sequestering of iron ion|0006880||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462347.1;locus_tag=PUW31_20390;product=bacterioferritin;protein_id=WJH08422.1;transl_table=11 CP118128.1 Genbank gene 4218957 4219424 . - . ID=gene-PUW31_20395;Name=hopD;gbkey=Gene;gene=hopD;gene_biotype=protein_coding;locus_tag=PUW31_20395 CP118128.1 Protein Homology CDS 4218957 4219424 . - 0 ID=cds-WJH08423.1;Parent=gene-PUW31_20395;Dbxref=NCBI_GP:WJH08423.1;Name=WJH08423.1;gbkey=CDS;gene=hopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462346.1;locus_tag=PUW31_20395;product=leader peptidase HopD;protein_id=WJH08423.1;transl_table=11 CP118128.1 Genbank gene 4219804 4220115 . + . ID=gene-PUW31_20400;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=PUW31_20400 CP118128.1 Protein Homology CDS 4219804 4220115 . + 0 ID=cds-WJH08424.1;Parent=gene-PUW31_20400;Dbxref=NCBI_GP:WJH08424.1;Name=WJH08424.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=PUW31_20400;product=30S ribosomal protein S10;protein_id=WJH08424.1;transl_table=11 CP118128.1 Genbank gene 4220148 4220777 . + . ID=gene-PUW31_20405;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=PUW31_20405 CP118128.1 Protein Homology CDS 4220148 4220777 . + 0 ID=cds-WJH08425.1;Parent=gene-PUW31_20405;Dbxref=NCBI_GP:WJH08425.1;Name=WJH08425.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=PUW31_20405;product=50S ribosomal protein L3;protein_id=WJH08425.1;transl_table=11 CP118128.1 Genbank gene 4220788 4221393 . + . ID=gene-PUW31_20410;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=PUW31_20410 CP118128.1 Protein Homology CDS 4220788 4221393 . + 0 ID=cds-WJH08426.1;Parent=gene-PUW31_20410;Dbxref=NCBI_GP:WJH08426.1;Name=WJH08426.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=PUW31_20410;product=50S ribosomal protein L4;protein_id=WJH08426.1;transl_table=11 CP118128.1 Genbank gene 4221390 4221692 . + . ID=gene-PUW31_20415;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=PUW31_20415 CP118128.1 Protein Homology CDS 4221390 4221692 . + 0 ID=cds-WJH08427.1;Parent=gene-PUW31_20415;Dbxref=NCBI_GP:WJH08427.1;Name=WJH08427.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=PUW31_20415;product=50S ribosomal protein L23;protein_id=WJH08427.1;transl_table=11 CP118128.1 Genbank gene 4221710 4222531 . + . ID=gene-PUW31_20420;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=PUW31_20420 CP118128.1 Protein Homology CDS 4221710 4222531 . + 0 ID=cds-WJH08428.1;Parent=gene-PUW31_20420;Dbxref=NCBI_GP:WJH08428.1;Name=WJH08428.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=PUW31_20420;product=50S ribosomal protein L2;protein_id=WJH08428.1;transl_table=11 CP118128.1 Genbank gene 4222548 4222826 . + . ID=gene-PUW31_20425;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=PUW31_20425 CP118128.1 Protein Homology CDS 4222548 4222826 . + 0 ID=cds-WJH08429.1;Parent=gene-PUW31_20425;Dbxref=NCBI_GP:WJH08429.1;Name=WJH08429.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=PUW31_20425;product=30S ribosomal protein S19;protein_id=WJH08429.1;transl_table=11 CP118128.1 Genbank pseudogene 4222841 4223172 . + . ID=gene-PUW31_20430;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=pseudogene;locus_tag=PUW31_20430;pseudo=true CP118128.1 Protein Homology CDS 4222841 4223172 . + 0 ID=cds-PUW31_20430;Parent=gene-PUW31_20430;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=PUW31_20430;product=50S ribosomal protein L22;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4223190 4223891 . + . ID=gene-PUW31_20435;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=PUW31_20435 CP118128.1 Protein Homology CDS 4223190 4223891 . + 0 ID=cds-WJH08430.1;Parent=gene-PUW31_20435;Dbxref=NCBI_GP:WJH08430.1;Name=WJH08430.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=PUW31_20435;product=30S ribosomal protein S3;protein_id=WJH08430.1;transl_table=11 CP118128.1 Genbank gene 4223904 4224314 . + . ID=gene-PUW31_20440;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=PUW31_20440 CP118128.1 Protein Homology CDS 4223904 4224314 . + 0 ID=cds-WJH08431.1;Parent=gene-PUW31_20440;Dbxref=NCBI_GP:WJH08431.1;Name=WJH08431.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=PUW31_20440;product=50S ribosomal protein L16;protein_id=WJH08431.1;transl_table=11 CP118128.1 Genbank gene 4224314 4224505 . + . ID=gene-PUW31_20445;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=PUW31_20445 CP118128.1 Protein Homology CDS 4224314 4224505 . + 0 ID=cds-WJH08432.1;Parent=gene-PUW31_20445;Dbxref=NCBI_GP:WJH08432.1;Name=WJH08432.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=PUW31_20445;product=50S ribosomal protein L29;protein_id=WJH08432.1;transl_table=11 CP118128.1 Genbank gene 4224505 4224759 . + . ID=gene-PUW31_20450;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=PUW31_20450 CP118128.1 Protein Homology CDS 4224505 4224759 . + 0 ID=cds-WJH08433.1;Parent=gene-PUW31_20450;Dbxref=NCBI_GP:WJH08433.1;Name=WJH08433.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=PUW31_20450;product=30S ribosomal protein S17;protein_id=WJH08433.1;transl_table=11 CP118128.1 Genbank gene 4224923 4225294 . + . ID=gene-PUW31_20455;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=PUW31_20455 CP118128.1 Protein Homology CDS 4224923 4225294 . + 0 ID=cds-WJH08434.1;Parent=gene-PUW31_20455;Dbxref=NCBI_GP:WJH08434.1;Name=WJH08434.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=PUW31_20455;product=50S ribosomal protein L14;protein_id=WJH08434.1;transl_table=11 CP118128.1 Genbank gene 4225305 4225619 . + . ID=gene-PUW31_20460;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=PUW31_20460 CP118128.1 Protein Homology CDS 4225305 4225619 . + 0 ID=cds-WJH08435.1;Parent=gene-PUW31_20460;Dbxref=NCBI_GP:WJH08435.1;Name=WJH08435.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=PUW31_20460;product=50S ribosomal protein L24;protein_id=WJH08435.1;transl_table=11 CP118128.1 Genbank gene 4225634 4226173 . + . ID=gene-PUW31_20465;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=PUW31_20465 CP118128.1 Protein Homology CDS 4225634 4226173 . + 0 ID=cds-WJH08436.1;Parent=gene-PUW31_20465;Dbxref=NCBI_GP:WJH08436.1;Name=WJH08436.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=PUW31_20465;product=50S ribosomal protein L5;protein_id=WJH08436.1;transl_table=11 CP118128.1 Genbank gene 4226188 4226493 . + . ID=gene-PUW31_20470;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=PUW31_20470 CP118128.1 Protein Homology CDS 4226188 4226493 . + 0 ID=cds-WJH08437.1;Parent=gene-PUW31_20470;Dbxref=NCBI_GP:WJH08437.1;Name=WJH08437.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=PUW31_20470;product=30S ribosomal protein S14;protein_id=WJH08437.1;transl_table=11 CP118128.1 Genbank gene 4226527 4226919 . + . ID=gene-PUW31_20475;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=PUW31_20475 CP118128.1 Protein Homology CDS 4226527 4226919 . + 0 ID=cds-WJH08438.1;Parent=gene-PUW31_20475;Dbxref=NCBI_GP:WJH08438.1;Name=WJH08438.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=PUW31_20475;product=30S ribosomal protein S8;protein_id=WJH08438.1;transl_table=11 CP118128.1 Genbank gene 4226932 4227465 . + . ID=gene-PUW31_20480;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=PUW31_20480 CP118128.1 Protein Homology CDS 4226932 4227465 . + 0 ID=cds-WJH08439.1;Parent=gene-PUW31_20480;Dbxref=NCBI_GP:WJH08439.1;Name=WJH08439.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=PUW31_20480;product=50S ribosomal protein L6;protein_id=WJH08439.1;transl_table=11 CP118128.1 Genbank gene 4227475 4227828 . + . ID=gene-PUW31_20485;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=PUW31_20485 CP118128.1 Protein Homology CDS 4227475 4227828 . + 0 ID=cds-WJH08440.1;Parent=gene-PUW31_20485;Dbxref=NCBI_GP:WJH08440.1;Name=WJH08440.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=PUW31_20485;product=50S ribosomal protein L18;protein_id=WJH08440.1;transl_table=11 CP118128.1 Genbank gene 4227843 4228346 . + . ID=gene-PUW31_20490;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=PUW31_20490 CP118128.1 Protein Homology CDS 4227843 4228346 . + 0 ID=cds-WJH08441.1;Parent=gene-PUW31_20490;Dbxref=NCBI_GP:WJH08441.1;Name=WJH08441.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=PUW31_20490;product=30S ribosomal protein S5;protein_id=WJH08441.1;transl_table=11 CP118128.1 Genbank gene 4228350 4228529 . + . ID=gene-PUW31_20495;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=PUW31_20495 CP118128.1 Protein Homology CDS 4228350 4228529 . + 0 ID=cds-WJH08442.1;Parent=gene-PUW31_20495;Dbxref=NCBI_GP:WJH08442.1;Name=WJH08442.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=PUW31_20495;product=50S ribosomal protein L30;protein_id=WJH08442.1;transl_table=11 CP118128.1 Genbank gene 4228533 4228967 . + . ID=gene-PUW31_20500;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=PUW31_20500 CP118128.1 Protein Homology CDS 4228533 4228967 . + 0 ID=cds-WJH08443.1;Parent=gene-PUW31_20500;Dbxref=NCBI_GP:WJH08443.1;Name=WJH08443.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=PUW31_20500;product=50S ribosomal protein L15;protein_id=WJH08443.1;transl_table=11 CP118128.1 Genbank gene 4228975 4230306 . + . ID=gene-PUW31_20505;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=PUW31_20505 CP118128.1 Protein Homology CDS 4228975 4230306 . + 0 ID=cds-WJH08444.1;Parent=gene-PUW31_20505;Dbxref=NCBI_GP:WJH08444.1;Name=WJH08444.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secY;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=PUW31_20505;product=preprotein translocase subunit SecY;protein_id=WJH08444.1;transl_table=11 CP118128.1 Genbank gene 4230338 4230454 . + . ID=gene-PUW31_20510;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=PUW31_20510 CP118128.1 Protein Homology CDS 4230338 4230454 . + 0 ID=cds-WJH08445.1;Parent=gene-PUW31_20510;Dbxref=NCBI_GP:WJH08445.1;Name=WJH08445.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=PUW31_20510;product=50S ribosomal protein L36;protein_id=WJH08445.1;transl_table=11 CP118128.1 Genbank gene 4230601 4230957 . + . ID=gene-PUW31_20515;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=PUW31_20515 CP118128.1 Protein Homology CDS 4230601 4230957 . + 0 ID=cds-WJH08446.1;Parent=gene-PUW31_20515;Dbxref=NCBI_GP:WJH08446.1;Name=WJH08446.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=PUW31_20515;product=30S ribosomal protein S13;protein_id=WJH08446.1;transl_table=11 CP118128.1 Genbank gene 4230974 4231363 . + . ID=gene-PUW31_20520;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=PUW31_20520 CP118128.1 Protein Homology CDS 4230974 4231363 . + 0 ID=cds-WJH08447.1;Parent=gene-PUW31_20520;Dbxref=NCBI_GP:WJH08447.1;Name=WJH08447.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=PUW31_20520;product=30S ribosomal protein S11;protein_id=WJH08447.1;transl_table=11 CP118128.1 Genbank gene 4231397 4232017 . + . ID=gene-PUW31_20525;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=PUW31_20525 CP118128.1 Protein Homology CDS 4231397 4232017 . + 0 ID=cds-WJH08448.1;Parent=gene-PUW31_20525;Dbxref=NCBI_GP:WJH08448.1;Name=WJH08448.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=PUW31_20525;product=30S ribosomal protein S4;protein_id=WJH08448.1;transl_table=11 CP118128.1 Genbank gene 4232043 4233032 . + . ID=gene-PUW31_20530;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=PUW31_20530 CP118128.1 Protein Homology CDS 4232043 4233032 . + 0 ID=cds-WJH08449.1;Parent=gene-PUW31_20530;Dbxref=NCBI_GP:WJH08449.1;Name=WJH08449.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;gene=rpoA;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=PUW31_20530;product=DNA-directed RNA polymerase subunit alpha;protein_id=WJH08449.1;transl_table=11 CP118128.1 Genbank gene 4233073 4233456 . + . ID=gene-PUW31_20535;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=PUW31_20535 CP118128.1 Protein Homology CDS 4233073 4233456 . + 0 ID=cds-WJH08450.1;Parent=gene-PUW31_20535;Dbxref=NCBI_GP:WJH08450.1;Name=WJH08450.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462318.1;locus_tag=PUW31_20535;product=50S ribosomal protein L17;protein_id=WJH08450.1;transl_table=11 CP118128.1 Genbank gene 4233561 4233929 . + . ID=gene-PUW31_20540;Name=PUW31_20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20540 CP118128.1 Protein Homology CDS 4233561 4233929 . + 0 ID=cds-WJH08451.1;Parent=gene-PUW31_20540;Dbxref=NCBI_GP:WJH08451.1;Name=WJH08451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462317.1;locus_tag=PUW31_20540;product=DUF1992 domain-containing protein;protein_id=WJH08451.1;transl_table=11 CP118128.1 Genbank gene 4233940 4234365 . + . ID=gene-PUW31_20545;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=PUW31_20545 CP118128.1 Protein Homology CDS 4233940 4234365 . + 0 ID=cds-WJH08452.1;Parent=gene-PUW31_20545;Dbxref=NCBI_GP:WJH08452.1;Name=WJH08452.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462316.1;locus_tag=PUW31_20545;product=Zn(2+)-responsive transcriptional regulator;protein_id=WJH08452.1;transl_table=11 CP118128.1 Genbank gene 4234423 4234692 . + . ID=gene-PUW31_20550;Name=PUW31_20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20550 CP118128.1 Protein Homology CDS 4234423 4234692 . + 0 ID=cds-WJH08453.1;Parent=gene-PUW31_20550;Dbxref=NCBI_GP:WJH08453.1;Name=WJH08453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000092708.1;locus_tag=PUW31_20550;product=alternative ribosome-rescue factor A;protein_id=WJH08453.1;transl_table=11 CP118128.1 Genbank gene 4234628 4235041 . - . ID=gene-PUW31_20555;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=PUW31_20555 CP118128.1 Protein Homology CDS 4234628 4235041 . - 0 ID=cds-WJH08454.1;Parent=gene-PUW31_20555;Dbxref=NCBI_GP:WJH08454.1;Name=WJH08454.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462314.1;locus_tag=PUW31_20555;product=large-conductance mechanosensitive channel protein MscL;protein_id=WJH08454.1;transl_table=11 CP118128.1 Genbank gene 4235183 4236559 . - . ID=gene-PUW31_20560;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=PUW31_20560 CP118128.1 Protein Homology CDS 4235183 4236559 . - 0 ID=cds-WJH08455.1;Parent=gene-PUW31_20560;Dbxref=NCBI_GP:WJH08455.1;Name=WJH08455.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=PUW31_20560;product=Trk system potassium transporter TrkA;protein_id=WJH08455.1;transl_table=11 CP118128.1 Genbank gene 4236581 4237870 . - . ID=gene-PUW31_20565;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=PUW31_20565 CP118128.1 Protein Homology CDS 4236581 4237870 . - 0 ID=cds-WJH08456.1;Parent=gene-PUW31_20565;Dbxref=NCBI_GP:WJH08456.1;Name=WJH08456.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462312.1;locus_tag=PUW31_20565;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WJH08456.1;transl_table=11 CP118128.1 Genbank gene 4237922 4238869 . - . ID=gene-PUW31_20570;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=PUW31_20570 CP118128.1 Protein Homology CDS 4237922 4238869 . - 0 ID=cds-WJH08457.1;Parent=gene-PUW31_20570;Dbxref=NCBI_GP:WJH08457.1;Name=WJH08457.1;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462311.1;locus_tag=PUW31_20570;product=methionyl-tRNA formyltransferase;protein_id=WJH08457.1;transl_table=11 CP118128.1 Genbank gene 4238885 4239394 . - . ID=gene-PUW31_20575;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=PUW31_20575 CP118128.1 Protein Homology CDS 4238885 4239394 . - 0 ID=cds-WJH08458.1;Parent=gene-PUW31_20575;Dbxref=NCBI_GP:WJH08458.1;Name=WJH08458.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462310.1;locus_tag=PUW31_20575;product=peptide deformylase;protein_id=WJH08458.1;transl_table=11 CP118128.1 Genbank pseudogene 4239526 4240649 . + . ID=gene-PUW31_20580;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=pseudogene;locus_tag=PUW31_20580;pseudo=true CP118128.1 Protein Homology CDS 4239526 4240649 . + 0 ID=cds-PUW31_20580;Parent=gene-PUW31_20580;Note=frameshifted;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462309.1;locus_tag=PUW31_20580;product=DNA-protecting protein DprA;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4240621 4241094 . + . ID=gene-PUW31_20585;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=PUW31_20585 CP118128.1 Protein Homology CDS 4240621 4241094 . + 0 ID=cds-WJH08459.1;Parent=gene-PUW31_20585;Dbxref=NCBI_GP:WJH08459.1;Name=WJH08459.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=PUW31_20585;product=DUF494 family protein Smg;protein_id=WJH08459.1;transl_table=11 CP118128.1 Genbank gene 4241121 4241663 . + . ID=gene-PUW31_20590;Name=PUW31_20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20590 CP118128.1 Protein Homology CDS 4241121 4241663 . + 0 ID=cds-WJH08460.1;Parent=gene-PUW31_20590;Dbxref=NCBI_GP:WJH08460.1;Name=WJH08460.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462307.1;locus_tag=PUW31_20590;product=topoisomerase DNA-binding C4 zinc finger domain-containing protein;protein_id=WJH08460.1;transl_table=11 CP118128.1 Genbank gene 4241668 4242240 . + . ID=gene-PUW31_20595;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=PUW31_20595 CP118128.1 Protein Homology CDS 4241668 4242240 . + 0 ID=cds-WJH08461.1;Parent=gene-PUW31_20595;Dbxref=NCBI_GP:WJH08461.1;Name=WJH08461.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462306.1;locus_tag=PUW31_20595;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WJH08461.1;transl_table=11 CP118128.1 Genbank gene 4242245 4243063 . + . ID=gene-PUW31_20600;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=PUW31_20600 CP118128.1 Protein Homology CDS 4242245 4243063 . + 0 ID=cds-WJH10798.1;Parent=gene-PUW31_20600;Dbxref=NCBI_GP:WJH10798.1;Name=WJH10798.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462305.1;locus_tag=PUW31_20600;product=shikimate dehydrogenase;protein_id=WJH10798.1;transl_table=11 CP118128.1 Genbank gene 4243060 4243317 . + . ID=gene-PUW31_20605;Name=PUW31_20605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20605 CP118128.1 Protein Homology CDS 4243060 4243317 . + 0 ID=cds-WJH08462.1;Parent=gene-PUW31_20605;Dbxref=NCBI_GP:WJH08462.1;Name=WJH08462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462304.1;locus_tag=PUW31_20605;product=DUF1488 domain-containing protein;protein_id=WJH08462.1;transl_table=11 CP118128.1 Genbank gene 4243293 4243847 . - . ID=gene-PUW31_20610;Name=PUW31_20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20610 CP118128.1 Protein Homology CDS 4243293 4243847 . - 0 ID=cds-WJH08463.1;Parent=gene-PUW31_20610;Dbxref=NCBI_GP:WJH08463.1;Name=WJH08463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462303.1;locus_tag=PUW31_20610;product=gamma carbonic anhydrase family protein;protein_id=WJH08463.1;transl_table=11 CP118128.1 Genbank gene 4243864 4244112 . + . ID=gene-PUW31_20615;Name=PUW31_20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20615 CP118128.1 GeneMarkS-2+ CDS 4243864 4244112 . + 0 ID=cds-WJH08464.1;Parent=gene-PUW31_20615;Dbxref=NCBI_GP:WJH08464.1;Name=WJH08464.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_20615;product=hypothetical protein;protein_id=WJH08464.1;transl_table=11 CP118128.1 Genbank gene 4244318 4245859 . + . ID=gene-PUW31_20620;Name=PUW31_20620;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW31_20620 CP118128.1 cmsearch rRNA 4244318 4245859 . + . ID=rna-PUW31_20620;Parent=gene-PUW31_20620;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_20620;product=16S ribosomal RNA CP118128.1 cmsearch exon 4244318 4245859 . + . ID=exon-PUW31_20620-1;Parent=rna-PUW31_20620;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_20620;product=16S ribosomal RNA CP118128.1 Genbank gene 4245945 4246020 . + . ID=gene-PUW31_20625;Name=PUW31_20625;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_20625 CP118128.1 tRNAscan-SE tRNA 4245945 4246020 . + . ID=rna-PUW31_20625;Parent=gene-PUW31_20625;anticodon=(pos:4245979..4245981);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_20625;product=tRNA-Glu CP118128.1 tRNAscan-SE exon 4245945 4246020 . + . ID=exon-PUW31_20625-1;Parent=rna-PUW31_20625;anticodon=(pos:4245979..4245981);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_20625;product=tRNA-Glu CP118128.1 Genbank gene 4246214 4249202 . + . ID=gene-PUW31_20630;Name=PUW31_20630;gbkey=Gene;gene_biotype=rRNA;locus_tag=PUW31_20630 CP118128.1 cmsearch rRNA 4246214 4249202 . + . ID=rna-PUW31_20630;Parent=gene-PUW31_20630;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_20630;product=23S ribosomal RNA CP118128.1 cmsearch exon 4246214 4249202 . + . ID=exon-PUW31_20630-1;Parent=rna-PUW31_20630;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_20630;product=23S ribosomal RNA CP118128.1 Genbank gene 4249399 4249514 . + . ID=gene-PUW31_20635;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PUW31_20635 CP118128.1 cmsearch rRNA 4249399 4249514 . + . ID=rna-PUW31_20635;Parent=gene-PUW31_20635;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_20635;product=5S ribosomal RNA CP118128.1 cmsearch exon 4249399 4249514 . + . ID=exon-PUW31_20635-1;Parent=rna-PUW31_20635;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PUW31_20635;product=5S ribosomal RNA CP118128.1 Genbank gene 4249680 4250117 . - . ID=gene-PUW31_20640;Name=PUW31_20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20640 CP118128.1 Protein Homology CDS 4249680 4250117 . - 0 ID=cds-WJH08465.1;Parent=gene-PUW31_20640;Dbxref=NCBI_GP:WJH08465.1;Name=WJH08465.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463046.1;locus_tag=PUW31_20640;product=acetyltransferase;protein_id=WJH08465.1;transl_table=11 CP118128.1 Genbank gene 4250274 4251203 . + . ID=gene-PUW31_20645;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=PUW31_20645 CP118128.1 Protein Homology CDS 4250274 4251203 . + 0 ID=cds-WJH08466.1;Parent=gene-PUW31_20645;Dbxref=NCBI_GP:WJH08466.1;Name=WJH08466.1;Ontology_term=GO:0009086,GO:0008899;gbkey=CDS;gene=metA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=PUW31_20645;product=homoserine O-succinyltransferase;protein_id=WJH08466.1;transl_table=11 CP118128.1 Genbank gene 4251472 4253073 . + . ID=gene-PUW31_20650;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=PUW31_20650 CP118128.1 Protein Homology CDS 4251472 4253073 . + 0 ID=cds-WJH10799.1;Parent=gene-PUW31_20650;Dbxref=NCBI_GP:WJH10799.1;Name=WJH10799.1;Ontology_term=GO:0006099,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463048.1;locus_tag=PUW31_20650;product=malate synthase A;protein_id=WJH10799.1;transl_table=11 CP118128.1 Genbank gene 4253105 4254409 . + . ID=gene-PUW31_20655;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=PUW31_20655 CP118128.1 Protein Homology CDS 4253105 4254409 . + 0 ID=cds-WJH08467.1;Parent=gene-PUW31_20655;Dbxref=NCBI_GP:WJH08467.1;Name=WJH08467.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463049.1;locus_tag=PUW31_20655;product=isocitrate lyase;protein_id=WJH08467.1;transl_table=11 CP118128.1 Genbank gene 4254511 4256262 . + . ID=gene-PUW31_20660;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=PUW31_20660 CP118128.1 Protein Homology CDS 4254511 4256262 . + 0 ID=cds-WJH08468.1;Parent=gene-PUW31_20660;Dbxref=NCBI_GP:WJH08468.1;Name=WJH08468.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463050.1;locus_tag=PUW31_20660;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WJH08468.1;transl_table=11 CP118128.1 Genbank gene 4256226 4256633 . - . ID=gene-PUW31_20665;Name=PUW31_20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20665 CP118128.1 Protein Homology CDS 4256226 4256633 . - 0 ID=cds-WJH10800.1;Parent=gene-PUW31_20665;Dbxref=NCBI_GP:WJH10800.1;Name=WJH10800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463051.1;locus_tag=PUW31_20665;product=ASCH domain-containing protein;protein_id=WJH10800.1;transl_table=11 CP118128.1 Genbank gene 4256644 4257468 . - . ID=gene-PUW31_20670;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=PUW31_20670 CP118128.1 Protein Homology CDS 4256644 4257468 . - 0 ID=cds-WJH08469.1;Parent=gene-PUW31_20670;Dbxref=NCBI_GP:WJH08469.1;Name=WJH08469.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463052.1;locus_tag=PUW31_20670;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WJH08469.1;transl_table=11 CP118128.1 Genbank pseudogene 4257847 4261453 . + . ID=gene-PUW31_20675;Name=metH;gbkey=Gene;gene=metH;gene_biotype=pseudogene;locus_tag=PUW31_20675;pseudo=true CP118128.1 Protein Homology CDS 4257847 4261453 . + 0 ID=cds-PUW31_20675;Parent=gene-PUW31_20675;Note=frameshifted;Ontology_term=GO:0009086,GO:0008270,GO:0008705;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: protein motif:HMM:NF013007.2%2CHMM:NF014961.2;locus_tag=PUW31_20675;product=methionine synthase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4261720 4263351 . + . ID=gene-PUW31_20680;Name=PUW31_20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20680 CP118128.1 Protein Homology CDS 4261720 4263351 . + 0 ID=cds-WJH08470.1;Parent=gene-PUW31_20680;Dbxref=NCBI_GP:WJH08470.1;Name=WJH08470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463054.1;locus_tag=PUW31_20680;product=Na/Pi cotransporter family protein;protein_id=WJH08470.1;transl_table=11 CP118128.1 Genbank gene 4263411 4264115 . - . ID=gene-PUW31_20685;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=PUW31_20685 CP118128.1 Protein Homology CDS 4263411 4264115 . - 0 ID=cds-WJH08471.1;Parent=gene-PUW31_20685;Dbxref=NCBI_GP:WJH08471.1;Name=WJH08471.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421779.1;locus_tag=PUW31_20685;product=dipeptidase PepE;protein_id=WJH08471.1;transl_table=11 CP118128.1 Genbank gene 4264187 4264288 . + . ID=gene-PUW31_20690;Name=PUW31_20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20690 CP118128.1 Protein Homology CDS 4264187 4264288 . + 0 ID=cds-WJH08472.1;Parent=gene-PUW31_20690;Dbxref=NCBI_GP:WJH08472.1;Name=WJH08472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463056.1;locus_tag=PUW31_20690;product=hypothetical protein;protein_id=WJH08472.1;transl_table=11 CP118128.1 Genbank gene 4264323 4264862 . + . ID=gene-PUW31_20695;Name=PUW31_20695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20695 CP118128.1 Protein Homology CDS 4264323 4264862 . + 0 ID=cds-WJH08473.1;Parent=gene-PUW31_20695;Dbxref=NCBI_GP:WJH08473.1;Name=WJH08473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463057.1;locus_tag=PUW31_20695;product=DUF2058 domain-containing protein;protein_id=WJH08473.1;transl_table=11 CP118128.1 Genbank gene 4264909 4265778 . + . ID=gene-PUW31_20700;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=PUW31_20700 CP118128.1 Protein Homology CDS 4264909 4265778 . + 0 ID=cds-WJH08474.1;Parent=gene-PUW31_20700;Dbxref=NCBI_GP:WJH08474.1;Name=WJH08474.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463058.1;locus_tag=PUW31_20700;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WJH08474.1;transl_table=11 CP118128.1 Genbank gene 4265775 4266047 . - . ID=gene-PUW31_20705;Name=PUW31_20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20705 CP118128.1 Protein Homology CDS 4265775 4266047 . - 0 ID=cds-WJH08475.1;Parent=gene-PUW31_20705;Dbxref=NCBI_GP:WJH08475.1;Name=WJH08475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463059.1;locus_tag=PUW31_20705;product=DUF3811 domain-containing protein;protein_id=WJH08475.1;transl_table=11 CP118128.1 Genbank gene 4266110 4266868 . - . ID=gene-PUW31_20710;Name=PUW31_20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20710 CP118128.1 Protein Homology CDS 4266110 4266868 . - 0 ID=cds-WJH08476.1;Parent=gene-PUW31_20710;Dbxref=NCBI_GP:WJH08476.1;Name=WJH08476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001068167.1;locus_tag=PUW31_20710;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WJH08476.1;transl_table=11 CP118128.1 Genbank pseudogene 4266855 4267718 . - . ID=gene-PUW31_20715;Name=PUW31_20715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_20715;pseudo=true CP118128.1 Protein Homology CDS 4266855 4267718 . - 0 ID=cds-PUW31_20715;Parent=gene-PUW31_20715;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000924639.1;locus_tag=PUW31_20715;product=Cof-type HAD-IIB family hydrolase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4267735 4268574 . - . ID=gene-PUW31_20720;Name=PUW31_20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20720 CP118128.1 Protein Homology CDS 4267735 4268574 . - 0 ID=cds-WJH08477.1;Parent=gene-PUW31_20720;Dbxref=NCBI_GP:WJH08477.1;Name=WJH08477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000472335.1;locus_tag=PUW31_20720;product=histidine biosynthesis protein;protein_id=WJH08477.1;transl_table=11 CP118128.1 Genbank pseudogene 4268598 4270054 . - . ID=gene-PUW31_20725;Name=PUW31_20725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_20725;pseudo=true CP118128.1 Protein Homology CDS 4268598 4270054 . - 0 ID=cds-PUW31_20725;Parent=gene-PUW31_20725;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716843.1;locus_tag=PUW31_20725;product=PTS sugar transporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4270483 4271211 . - . ID=gene-PUW31_20730;Name=PUW31_20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20730 CP118128.1 Protein Homology CDS 4270483 4271211 . - 0 ID=cds-WJH08478.1;Parent=gene-PUW31_20730;Dbxref=NCBI_GP:WJH08478.1;Name=WJH08478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463061.1;locus_tag=PUW31_20730;product=hypothetical protein;protein_id=WJH08478.1;transl_table=11 CP118128.1 Genbank gene 4271790 4272077 . - . ID=gene-PUW31_20735;Name=PUW31_20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20735 CP118128.1 Protein Homology CDS 4271790 4272077 . - 0 ID=cds-WJH10801.1;Parent=gene-PUW31_20735;Dbxref=NCBI_GP:WJH10801.1;Name=WJH10801.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025953.2;locus_tag=PUW31_20735;product=DapH/DapD/GlmU-related protein;protein_id=WJH10801.1;transl_table=11 CP118128.1 Genbank pseudogene 4272108 4272333 . - . ID=gene-PUW31_20740;Name=PUW31_20740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_20740;pseudo=true CP118128.1 Protein Homology CDS 4272108 4272333 . - 0 ID=cds-PUW31_20740;Parent=gene-PUW31_20740;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463062.1;locus_tag=PUW31_20740;product=hypothetical protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4272656 4273003 . + . ID=gene-PUW31_20745;Name=PUW31_20745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20745 CP118128.1 Protein Homology CDS 4272656 4273003 . + 0 ID=cds-WJH08479.1;Parent=gene-PUW31_20745;Dbxref=NCBI_GP:WJH08479.1;Name=WJH08479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000615246.1;locus_tag=PUW31_20745;product=Mor transcription activator family protein;protein_id=WJH08479.1;transl_table=11 CP118128.1 Genbank gene 4273134 4274483 . - . ID=gene-PUW31_20750;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=PUW31_20750 CP118128.1 Protein Homology CDS 4273134 4274483 . - 0 ID=cds-WJH08480.1;Parent=gene-PUW31_20750;Dbxref=NCBI_GP:WJH08480.1;Name=WJH08480.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463085.1;locus_tag=PUW31_20750;product=lysine-sensitive aspartokinase 3;protein_id=WJH08480.1;transl_table=11 CP118128.1 Genbank gene 4274871 4276520 . + . ID=gene-PUW31_20755;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=PUW31_20755 CP118128.1 Protein Homology CDS 4274871 4276520 . + 0 ID=cds-WJH08481.1;Parent=gene-PUW31_20755;Dbxref=NCBI_GP:WJH08481.1;Name=WJH08481.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463086.1;locus_tag=PUW31_20755;product=glucose-6-phosphate isomerase;protein_id=WJH08481.1;transl_table=11 CP118128.1 Genbank gene 4276963 4277205 . + . ID=gene-PUW31_20760;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=PUW31_20760 CP118128.1 Protein Homology CDS 4276963 4277205 . + 0 ID=cds-WJH10802.1;Parent=gene-PUW31_20760;Dbxref=NCBI_GP:WJH10802.1;Name=WJH10802.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=PUW31_20760;product=exopolysaccharide production protein YjbE;protein_id=WJH10802.1;transl_table=11 CP118128.1 Genbank gene 4277269 4277907 . + . ID=gene-PUW31_20765;Name=PUW31_20765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20765 CP118128.1 Protein Homology CDS 4277269 4277907 . + 0 ID=cds-WJH08482.1;Parent=gene-PUW31_20765;Dbxref=NCBI_GP:WJH08482.1;Name=WJH08482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824802.1;locus_tag=PUW31_20765;product=YjbF family lipoprotein;protein_id=WJH08482.1;transl_table=11 CP118128.1 Genbank gene 4277904 4278641 . + . ID=gene-PUW31_20770;Name=PUW31_20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20770 CP118128.1 Protein Homology CDS 4277904 4278641 . + 0 ID=cds-WJH08483.1;Parent=gene-PUW31_20770;Dbxref=NCBI_GP:WJH08483.1;Name=WJH08483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463089.1;locus_tag=PUW31_20770;product=capsule biosynthesis GfcC family protein;protein_id=WJH08483.1;transl_table=11 CP118128.1 Genbank gene 4278641 4280737 . + . ID=gene-PUW31_20775;Name=PUW31_20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20775 CP118128.1 Protein Homology CDS 4278641 4280737 . + 0 ID=cds-WJH08484.1;Parent=gene-PUW31_20775;Dbxref=NCBI_GP:WJH08484.1;Name=WJH08484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463090.1;locus_tag=PUW31_20775;product=YjbH domain-containing protein;protein_id=WJH08484.1;transl_table=11 CP118128.1 Genbank gene 4280880 4281290 . + . ID=gene-PUW31_20780;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=PUW31_20780 CP118128.1 Protein Homology CDS 4280880 4281290 . + 0 ID=cds-WJH08485.1;Parent=gene-PUW31_20780;Dbxref=NCBI_GP:WJH08485.1;Name=WJH08485.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463091.1;locus_tag=PUW31_20780;product=phosphate-starvation-inducible protein PsiE;protein_id=WJH08485.1;transl_table=11 CP118128.1 Genbank gene 4281456 4282346 . - . ID=gene-PUW31_20785;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=PUW31_20785 CP118128.1 Protein Homology CDS 4281456 4282346 . - 0 ID=cds-WJH08486.1;Parent=gene-PUW31_20785;Dbxref=NCBI_GP:WJH08486.1;Name=WJH08486.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463092.1;locus_tag=PUW31_20785;product=maltose ABC transporter permease MalG;protein_id=WJH08486.1;transl_table=11 CP118128.1 Genbank gene 4282361 4283905 . - . ID=gene-PUW31_20790;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=PUW31_20790 CP118128.1 Protein Homology CDS 4282361 4283905 . - 0 ID=cds-WJH08487.1;Parent=gene-PUW31_20790;Dbxref=NCBI_GP:WJH08487.1;Name=WJH08487.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463093.1;locus_tag=PUW31_20790;product=maltose ABC transporter permease MalF;protein_id=WJH08487.1;transl_table=11 CP118128.1 Genbank gene 4284037 4285227 . - . ID=gene-PUW31_20795;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=PUW31_20795 CP118128.1 Protein Homology CDS 4284037 4285227 . - 0 ID=cds-WJH08488.1;Parent=gene-PUW31_20795;Dbxref=NCBI_GP:WJH08488.1;Name=WJH08488.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=PUW31_20795;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WJH08488.1;transl_table=11 CP118128.1 Genbank gene 4285588 4286697 . + . ID=gene-PUW31_20800;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=PUW31_20800 CP118128.1 Protein Homology CDS 4285588 4286697 . + 0 ID=cds-WJH08489.1;Parent=gene-PUW31_20800;Dbxref=NCBI_GP:WJH08489.1;Name=WJH08489.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=PUW31_20800;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WJH08489.1;transl_table=11 CP118128.1 Genbank gene 4286786 4288144 . + . ID=gene-PUW31_20805;Name=PUW31_20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20805 CP118128.1 Protein Homology CDS 4286786 4288144 . + 0 ID=cds-WJH08490.1;Parent=gene-PUW31_20805;Dbxref=NCBI_GP:WJH08490.1;Name=WJH08490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463096.1;locus_tag=PUW31_20805;product=maltoporin;protein_id=WJH08490.1;transl_table=11 CP118128.1 Genbank gene 4288308 4289225 . + . ID=gene-PUW31_20810;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=PUW31_20810 CP118128.1 Protein Homology CDS 4288308 4289225 . + 0 ID=cds-WJH08491.1;Parent=gene-PUW31_20810;Dbxref=NCBI_GP:WJH08491.1;Name=WJH08491.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463097.1;locus_tag=PUW31_20810;product=maltose operon protein MalM;protein_id=WJH08491.1;transl_table=11 CP118128.1 Genbank gene 4289406 4289903 . + . ID=gene-PUW31_20815;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=PUW31_20815 CP118128.1 Protein Homology CDS 4289406 4289903 . + 0 ID=cds-WJH08492.1;Parent=gene-PUW31_20815;Dbxref=NCBI_GP:WJH08492.1;Name=WJH08492.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463098.1;locus_tag=PUW31_20815;product=chorismate lyase;protein_id=WJH08492.1;transl_table=11 CP118128.1 Genbank gene 4289917 4290789 . + . ID=gene-PUW31_20820;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=PUW31_20820 CP118128.1 Protein Homology CDS 4289917 4290789 . + 0 ID=cds-WJH08493.1;Parent=gene-PUW31_20820;Dbxref=NCBI_GP:WJH08493.1;Name=WJH08493.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate octaprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463099.1;locus_tag=PUW31_20820;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WJH08493.1;transl_table=11 CP118128.1 Genbank gene 4290888 4293308 . - . ID=gene-PUW31_20825;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=PUW31_20825 CP118128.1 Protein Homology CDS 4290888 4293308 . - 0 ID=cds-WJH08494.1;Parent=gene-PUW31_20825;Dbxref=NCBI_GP:WJH08494.1;Name=WJH08494.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463100.1;locus_tag=PUW31_20825;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WJH08494.1;transl_table=11 CP118128.1 Genbank gene 4293479 4293847 . + . ID=gene-PUW31_20830;Name=PUW31_20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20830 CP118128.1 Protein Homology CDS 4293479 4293847 . + 0 ID=cds-WJH08495.1;Parent=gene-PUW31_20830;Dbxref=NCBI_GP:WJH08495.1;Name=WJH08495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463101.1;locus_tag=PUW31_20830;product=diacylglycerol kinase;protein_id=WJH08495.1;transl_table=11 CP118128.1 Genbank gene 4293955 4294563 . + . ID=gene-PUW31_20835;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=PUW31_20835 CP118128.1 Protein Homology CDS 4293955 4294563 . + 0 ID=cds-WJH08496.1;Parent=gene-PUW31_20835;Dbxref=NCBI_GP:WJH08496.1;Name=WJH08496.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=PUW31_20835;product=transcriptional repressor LexA;protein_id=WJH08496.1;transl_table=11 CP118128.1 Genbank pseudogene 4294742 4296066 . + . ID=gene-PUW31_20840;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=pseudogene;locus_tag=PUW31_20840;pseudo=true CP118128.1 Protein Homology CDS 4294742 4296066 . + 0 ID=cds-PUW31_20840;Parent=gene-PUW31_20840;Note=frameshifted;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463103.1;locus_tag=PUW31_20840;product=MATE family efflux transporter DinF;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4296063 4296176 . + . ID=gene-PUW31_20845;Name=PUW31_20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20845 CP118128.1 Protein Homology CDS 4296063 4296176 . + 0 ID=cds-WJH08497.1;Parent=gene-PUW31_20845;Dbxref=NCBI_GP:WJH08497.1;Name=WJH08497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463104.1;locus_tag=PUW31_20845;product=hypothetical protein;protein_id=WJH08497.1;transl_table=11 CP118128.1 Genbank gene 4296198 4296407 . + . ID=gene-PUW31_20850;Name=PUW31_20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20850 CP118128.1 Protein Homology CDS 4296198 4296407 . + 0 ID=cds-WJH10803.1;Parent=gene-PUW31_20850;Dbxref=NCBI_GP:WJH10803.1;Name=WJH10803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=PUW31_20850;product=CsbD family protein;protein_id=WJH10803.1;transl_table=11 CP118128.1 Genbank gene 4296506 4297021 . - . ID=gene-PUW31_20855;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=PUW31_20855 CP118128.1 Protein Homology CDS 4296506 4297021 . - 0 ID=cds-WJH08498.1;Parent=gene-PUW31_20855;Dbxref=NCBI_GP:WJH08498.1;Name=WJH08498.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463106.1;locus_tag=PUW31_20855;product=zinc uptake transcriptional repressor Zur;protein_id=WJH08498.1;transl_table=11 CP118128.1 Genbank pseudogene 4297268 4298577 . + . ID=gene-PUW31_20860;Name=PUW31_20860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_20860;pseudo=true CP118128.1 Protein Homology CDS 4297268 4298577 . + 0 ID=cds-PUW31_20860;Parent=gene-PUW31_20860;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463107.1;locus_tag=PUW31_20860;product=conjugal transfer protein TraF;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4298665 4299663 . + . ID=gene-PUW31_20865;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=PUW31_20865 CP118128.1 Protein Homology CDS 4298665 4299663 . + 0 ID=cds-WJH08499.1;Parent=gene-PUW31_20865;Dbxref=NCBI_GP:WJH08499.1;Name=WJH08499.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463108.1;locus_tag=PUW31_20865;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WJH08499.1;transl_table=11 CP118128.1 Genbank gene 4299831 4300073 . + . ID=gene-PUW31_20870;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=PUW31_20870 CP118128.1 Protein Homology CDS 4299831 4300073 . + 0 ID=cds-WJH08500.1;Parent=gene-PUW31_20870;Dbxref=NCBI_GP:WJH08500.1;Name=WJH08500.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463109.1;locus_tag=PUW31_20870;product=envelope stress response protein PspG;protein_id=WJH08500.1;transl_table=11 CP118128.1 Genbank gene 4300248 4301231 . - . ID=gene-PUW31_20875;Name=PUW31_20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20875 CP118128.1 Protein Homology CDS 4300248 4301231 . - 0 ID=cds-WJH08501.1;Parent=gene-PUW31_20875;Dbxref=NCBI_GP:WJH08501.1;Name=WJH08501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463110.1;locus_tag=PUW31_20875;product=quinone oxidoreductase;protein_id=WJH08501.1;transl_table=11 CP118128.1 Genbank gene 4301296 4302711 . + . ID=gene-PUW31_20880;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=PUW31_20880 CP118128.1 Protein Homology CDS 4301296 4302711 . + 0 ID=cds-WJH08502.1;Parent=gene-PUW31_20880;Dbxref=NCBI_GP:WJH08502.1;Name=WJH08502.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463111.1;locus_tag=PUW31_20880;product=replicative DNA helicase;protein_id=WJH08502.1;transl_table=11 CP118128.1 Genbank gene 4302743 4303822 . + . ID=gene-PUW31_20885;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=PUW31_20885 CP118128.1 Protein Homology CDS 4302743 4303822 . + 0 ID=cds-WJH08503.1;Parent=gene-PUW31_20885;Dbxref=NCBI_GP:WJH08503.1;Name=WJH08503.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463112.1;locus_tag=PUW31_20885;product=alanine racemase;protein_id=WJH08503.1;transl_table=11 CP118128.1 Genbank gene 4304008 4305201 . + . ID=gene-PUW31_20890;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=PUW31_20890 CP118128.1 Protein Homology CDS 4304008 4305201 . + 0 ID=cds-WJH08504.1;Parent=gene-PUW31_20890;Dbxref=NCBI_GP:WJH08504.1;Name=WJH08504.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463113.1;locus_tag=PUW31_20890;product=aromatic amino acid transaminase;protein_id=WJH08504.1;transl_table=11 CP118128.1 Genbank gene 4305388 4306101 . + . ID=gene-PUW31_20895;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=PUW31_20895 CP118128.1 Protein Homology CDS 4305388 4306101 . + 0 ID=cds-WJH08505.1;Parent=gene-PUW31_20895;Dbxref=NCBI_GP:WJH08505.1;Name=WJH08505.1;Ontology_term=GO:0003993;gbkey=CDS;gene=aphA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463114.1;locus_tag=PUW31_20895;product=acid phosphatase AphA;protein_id=WJH08505.1;transl_table=11 CP118128.1 Genbank gene 4306230 4306646 . + . ID=gene-PUW31_20900;Name=PUW31_20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20900 CP118128.1 Protein Homology CDS 4306230 4306646 . + 0 ID=cds-WJH08506.1;Parent=gene-PUW31_20900;Dbxref=NCBI_GP:WJH08506.1;Name=WJH08506.1;Ontology_term=GO:0008150,GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463115.1;locus_tag=PUW31_20900;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WJH08506.1;transl_table=11 CP118128.1 Genbank gene 4306649 4307005 . + . ID=gene-PUW31_20905;Name=PUW31_20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20905 CP118128.1 Protein Homology CDS 4306649 4307005 . + 0 ID=cds-WJH08507.1;Parent=gene-PUW31_20905;Dbxref=NCBI_GP:WJH08507.1;Name=WJH08507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463116.1;locus_tag=PUW31_20905;product=MmcQ/YjbR family DNA-binding protein;protein_id=WJH08507.1;transl_table=11 CP118128.1 Genbank gene 4307006 4307344 . - . ID=gene-PUW31_20910;Name=PUW31_20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20910 CP118128.1 Protein Homology CDS 4307006 4307344 . - 0 ID=cds-WJH08508.1;Parent=gene-PUW31_20910;Dbxref=NCBI_GP:WJH08508.1;Name=WJH08508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463117.1;locus_tag=PUW31_20910;product=hypothetical protein;protein_id=WJH08508.1;transl_table=11 CP118128.1 Genbank gene 4307331 4307786 . - . ID=gene-PUW31_20915;Name=PUW31_20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20915 CP118128.1 Protein Homology CDS 4307331 4307786 . - 0 ID=cds-WJH08509.1;Parent=gene-PUW31_20915;Dbxref=NCBI_GP:WJH08509.1;Name=WJH08509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463118.1;locus_tag=PUW31_20915;product=hypothetical protein;protein_id=WJH08509.1;transl_table=11 CP118128.1 Genbank gene 4307918 4310743 . - . ID=gene-PUW31_20920;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=PUW31_20920 CP118128.1 Protein Homology CDS 4307918 4310743 . - 0 ID=cds-WJH08510.1;Parent=gene-PUW31_20920;Dbxref=NCBI_GP:WJH08510.1;Name=WJH08510.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463119.1;locus_tag=PUW31_20920;product=excinuclease ABC subunit UvrA;protein_id=WJH08510.1;transl_table=11 CP118128.1 Genbank gene 4310991 4311521 . + . ID=gene-PUW31_20925;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=PUW31_20925 CP118128.1 Protein Homology CDS 4310991 4311521 . + 0 ID=cds-WJH08511.1;Parent=gene-PUW31_20925;Dbxref=NCBI_GP:WJH08511.1;Name=WJH08511.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463121.1;locus_tag=PUW31_20925;product=single-stranded DNA-binding protein SSB1;protein_id=WJH08511.1;transl_table=11 CP118128.1 Genbank gene 4312562 4313194 . + . ID=gene-PUW31_20930;Name=siiA;gbkey=Gene;gene=siiA;gene_biotype=protein_coding;locus_tag=PUW31_20930 CP118128.1 Protein Homology CDS 4312562 4313194 . + 0 ID=cds-WJH08512.1;Parent=gene-PUW31_20930;Dbxref=NCBI_GP:WJH08512.1;Name=WJH08512.1;gbkey=CDS;gene=siiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463122.1;locus_tag=PUW31_20930;product=SPI-4 type I secretion system auxiliary protein SiiA;protein_id=WJH08512.1;transl_table=11 CP118128.1 Genbank gene 4313191 4314579 . + . ID=gene-PUW31_20935;Name=PUW31_20935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20935 CP118128.1 Protein Homology CDS 4313191 4314579 . + 0 ID=cds-WJH08513.1;Parent=gene-PUW31_20935;Dbxref=NCBI_GP:WJH08513.1;Name=WJH08513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463123.1;locus_tag=PUW31_20935;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WJH08513.1;transl_table=11 CP118128.1 Genbank gene 4314569 4315888 . + . ID=gene-PUW31_20940;Name=siiC;gbkey=Gene;gene=siiC;gene_biotype=protein_coding;locus_tag=PUW31_20940 CP118128.1 Protein Homology CDS 4314569 4315888 . + 0 ID=cds-WJH08514.1;Parent=gene-PUW31_20940;Dbxref=NCBI_GP:WJH08514.1;Name=WJH08514.1;gbkey=CDS;gene=siiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463124.1;locus_tag=PUW31_20940;product=SPI-4 type I secretion system protein SiiC;protein_id=WJH08514.1;transl_table=11 CP118128.1 Genbank gene 4315885 4317162 . + . ID=gene-PUW31_20945;Name=siiD;gbkey=Gene;gene=siiD;gene_biotype=protein_coding;locus_tag=PUW31_20945 CP118128.1 Protein Homology CDS 4315885 4317162 . + 0 ID=cds-WJH08515.1;Parent=gene-PUW31_20945;Dbxref=NCBI_GP:WJH08515.1;Name=WJH08515.1;gbkey=CDS;gene=siiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463125.1;locus_tag=PUW31_20945;product=SPI-4 type I secretion system protein SiiD;protein_id=WJH08515.1;transl_table=11 CP118128.1 Genbank gene 4317179 4333858 . + . ID=gene-PUW31_20950;Name=siiE;gbkey=Gene;gene=siiE;gene_biotype=protein_coding;locus_tag=PUW31_20950 CP118128.1 Protein Homology CDS 4317179 4333858 . + 0 ID=cds-WJH08516.1;Parent=gene-PUW31_20950;Dbxref=NCBI_GP:WJH08516.1;Name=WJH08516.1;gbkey=CDS;gene=siiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=PUW31_20950;product=non-fimbrial adhesin SiiE;protein_id=WJH08516.1;transl_table=11 CP118128.1 Genbank gene 4333898 4335964 . + . ID=gene-PUW31_20955;Name=siiF;gbkey=Gene;gene=siiF;gene_biotype=protein_coding;locus_tag=PUW31_20955 CP118128.1 Protein Homology CDS 4333898 4335964 . + 0 ID=cds-WJH08517.1;Parent=gene-PUW31_20955;Dbxref=NCBI_GP:WJH08517.1;Name=WJH08517.1;gbkey=CDS;gene=siiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463127.1;locus_tag=PUW31_20955;product=SPI-4 type I secretion system protein SiiF;protein_id=WJH08517.1;transl_table=11 CP118128.1 Genbank gene 4336242 4336523 . - . ID=gene-PUW31_20960;Name=PUW31_20960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20960 CP118128.1 Protein Homology CDS 4336242 4336523 . - 0 ID=cds-WJH08518.1;Parent=gene-PUW31_20960;Dbxref=NCBI_GP:WJH08518.1;Name=WJH08518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463128.1;locus_tag=PUW31_20960;product=YjcB family protein;protein_id=WJH08518.1;transl_table=11 CP118128.1 Genbank pseudogene 4337085 4338679 . + . ID=gene-PUW31_20965;Name=PUW31_20965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_20965;pseudo=true CP118128.1 Protein Homology CDS 4337085 4338679 . + 0 ID=cds-PUW31_20965;Parent=gene-PUW31_20965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463129.1;locus_tag=PUW31_20965;product=EAL domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4338667 4338990 . - . ID=gene-PUW31_20970;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=PUW31_20970 CP118128.1 Protein Homology CDS 4338667 4338990 . - 0 ID=cds-WJH08519.1;Parent=gene-PUW31_20970;Dbxref=NCBI_GP:WJH08519.1;Name=WJH08519.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463130.1;locus_tag=PUW31_20970;product=superoxide response transcriptional regulator SoxS;protein_id=WJH08519.1;transl_table=11 CP118128.1 Genbank pseudogene 4339077 4339533 . + . ID=gene-PUW31_20975;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=pseudogene;locus_tag=PUW31_20975;pseudo=true CP118128.1 Protein Homology CDS 4339077 4339533 . + 0 ID=cds-PUW31_20975;Parent=gene-PUW31_20975;Note=frameshifted;Ontology_term=GO:0006355,GO:0006979,GO:0003677,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463131.1;locus_tag=PUW31_20975;product=redox-sensitive transcriptional activator SoxR;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4339826 4340494 . + . ID=gene-PUW31_20980;Name=PUW31_20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20980 CP118128.1 Protein Homology CDS 4339826 4340494 . + 0 ID=cds-WJH08520.1;Parent=gene-PUW31_20980;Dbxref=NCBI_GP:WJH08520.1;Name=WJH08520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463132.1;locus_tag=PUW31_20980;product=glutathione S-transferase;protein_id=WJH08520.1;transl_table=11 CP118128.1 Genbank pseudogene 4340842 4342190 . + . ID=gene-PUW31_20985;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=pseudogene;gene_synonym=yjcD;locus_tag=PUW31_20985;pseudo=true CP118128.1 Protein Homology CDS 4340842 4342190 . + 0 ID=cds-PUW31_20985;Parent=gene-PUW31_20985;Note=frameshifted;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=PUW31_20985;product=guanine/hypoxanthine transporter GhxP;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 4342367 4343985 . + . ID=gene-PUW31_20990;Name=PUW31_20990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_20990;pseudo=true CP118128.1 Protein Homology CDS 4342367 4343985 . + 0 ID=cds-PUW31_20990;Parent=gene-PUW31_20990;Note=frameshifted;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385;gbkey=CDS;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: protein motif:HMM:NF013188.2;locus_tag=PUW31_20990;product=Na+/H+ antiporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4344080 4344967 . - . ID=gene-PUW31_20995;Name=PUW31_20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_20995 CP118128.1 Protein Homology CDS 4344080 4344967 . - 0 ID=cds-WJH08521.1;Parent=gene-PUW31_20995;Dbxref=NCBI_GP:WJH08521.1;Name=WJH08521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463135.1;locus_tag=PUW31_20995;product=LysR family transcriptional regulator;protein_id=WJH08521.1;transl_table=11 CP118128.1 Genbank gene 4345071 4345481 . + . ID=gene-PUW31_21000;Name=PUW31_21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21000 CP118128.1 Protein Homology CDS 4345071 4345481 . + 0 ID=cds-WJH08522.1;Parent=gene-PUW31_21000;Dbxref=NCBI_GP:WJH08522.1;Name=WJH08522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463136.1;locus_tag=PUW31_21000;product=CidA/LrgA family protein;protein_id=WJH08522.1;transl_table=11 CP118128.1 Genbank gene 4345474 4346163 . + . ID=gene-PUW31_21005;Name=PUW31_21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21005 CP118128.1 Protein Homology CDS 4345474 4346163 . + 0 ID=cds-WJH08523.1;Parent=gene-PUW31_21005;Dbxref=NCBI_GP:WJH08523.1;Name=WJH08523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463137.1;locus_tag=PUW31_21005;product=LrgB family protein;protein_id=WJH08523.1;transl_table=11 CP118128.1 Genbank gene 4346201 4347850 . - . ID=gene-PUW31_21010;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=PUW31_21010 CP118128.1 Protein Homology CDS 4346201 4347850 . - 0 ID=cds-WJH08524.1;Parent=gene-PUW31_21010;Dbxref=NCBI_GP:WJH08524.1;Name=WJH08524.1;Ontology_term=GO:0006814,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463138.1;locus_tag=PUW31_21010;product=cation/acetate symporter ActP;protein_id=WJH08524.1;transl_table=11 CP118128.1 Genbank gene 4347847 4348161 . - . ID=gene-PUW31_21015;Name=PUW31_21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21015 CP118128.1 Protein Homology CDS 4347847 4348161 . - 0 ID=cds-WJH10804.1;Parent=gene-PUW31_21015;Dbxref=NCBI_GP:WJH10804.1;Name=WJH10804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463139.1;locus_tag=PUW31_21015;product=DUF485 domain-containing protein;protein_id=WJH10804.1;transl_table=11 CP118128.1 Genbank pseudogene 4348407 4350364 . - . ID=gene-PUW31_21020;Name=acs;gbkey=Gene;gene=acs;gene_biotype=pseudogene;locus_tag=PUW31_21020;pseudo=true CP118128.1 Protein Homology CDS 4348407 4350364 . - 0 ID=cds-PUW31_21020;Parent=gene-PUW31_21020;Note=frameshifted;Ontology_term=GO:0019427,GO:0003987;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463140.1;locus_tag=PUW31_21020;product=acetate--CoA ligase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4350796 4352232 . + . ID=gene-PUW31_21025;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=PUW31_21025 CP118128.1 Protein Homology CDS 4350796 4352232 . + 0 ID=cds-WJH08525.1;Parent=gene-PUW31_21025;Dbxref=NCBI_GP:WJH08525.1;Name=WJH08525.1;Ontology_term=GO:0042279;gbkey=CDS;gene=nrfA;go_function=nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463142.1;locus_tag=PUW31_21025;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WJH08525.1;transl_table=11 CP118128.1 Genbank gene 4352344 4352910 . + . ID=gene-PUW31_21030;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=PUW31_21030 CP118128.1 Protein Homology CDS 4352344 4352910 . + 0 ID=cds-WJH08526.1;Parent=gene-PUW31_21030;Dbxref=NCBI_GP:WJH08526.1;Name=WJH08526.1;Ontology_term=GO:0006807,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=PUW31_21030;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WJH08526.1;transl_table=11 CP118128.1 Genbank gene 4352907 4353578 . + . ID=gene-PUW31_21035;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=PUW31_21035 CP118128.1 Protein Homology CDS 4352907 4353578 . + 0 ID=cds-WJH08527.1;Parent=gene-PUW31_21035;Dbxref=NCBI_GP:WJH08527.1;Name=WJH08527.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463144.1;locus_tag=PUW31_21035;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WJH08527.1;transl_table=11 CP118128.1 Genbank gene 4353575 4354531 . + . ID=gene-PUW31_21040;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=PUW31_21040 CP118128.1 Protein Homology CDS 4353575 4354531 . + 0 ID=cds-WJH08528.1;Parent=gene-PUW31_21040;Dbxref=NCBI_GP:WJH08528.1;Name=WJH08528.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463145.1;locus_tag=PUW31_21040;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WJH08528.1;transl_table=11 CP118128.1 Genbank pseudogene 4354524 4356762 . + . ID=gene-PUW31_21045;Name=nrfF;gbkey=Gene;gene=nrfF;gene_biotype=pseudogene;locus_tag=PUW31_21045;pseudo=true CP118128.1 Protein Homology CDS 4354524 4356762 . + 0 ID=cds-PUW31_21045;Parent=gene-PUW31_21045;Note=frameshifted%3B internal stop;gbkey=CDS;gene=nrfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=PUW31_21045;product=heme lyase NrfEFG subunit NrfF;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4356759 4357379 . + . ID=gene-PUW31_21050;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=PUW31_21050 CP118128.1 Protein Homology CDS 4356759 4357379 . + 0 ID=cds-WJH08529.1;Parent=gene-PUW31_21050;Dbxref=NCBI_GP:WJH08529.1;Name=WJH08529.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463147.1;locus_tag=PUW31_21050;product=heme lyase NrfEFG subunit NrfG;protein_id=WJH08529.1;transl_table=11 CP118128.1 Genbank gene 4357724 4359034 . + . ID=gene-PUW31_21055;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=PUW31_21055 CP118128.1 Protein Homology CDS 4357724 4359034 . + 0 ID=cds-WJH08530.1;Parent=gene-PUW31_21055;Dbxref=NCBI_GP:WJH08530.1;Name=WJH08530.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463148.1;locus_tag=PUW31_21055;product=glutamate/aspartate:proton symporter GltP;protein_id=WJH08530.1;transl_table=11 CP118128.1 Genbank gene 4359192 4359881 . - . ID=gene-PUW31_21060;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=PUW31_21060 CP118128.1 Protein Homology CDS 4359192 4359881 . - 0 ID=cds-WJH08531.1;Parent=gene-PUW31_21060;Dbxref=NCBI_GP:WJH08531.1;Name=WJH08531.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463149.1;locus_tag=PUW31_21060;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WJH08531.1;transl_table=11 CP118128.1 Genbank gene 4360058 4362205 . - . ID=gene-PUW31_21065;Name=PUW31_21065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21065 CP118128.1 Protein Homology CDS 4360058 4362205 . - 0 ID=cds-WJH08532.1;Parent=gene-PUW31_21065;Dbxref=NCBI_GP:WJH08532.1;Name=WJH08532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463150.1;locus_tag=PUW31_21065;product=formate dehydrogenase H subunit alpha%2C selenocysteine-containing;protein_id=WJH08532.1;transl_except=(pos:complement(4361786..4361788)%2Caa:Sec);transl_table=11 CP118128.1 Genbank pseudogene 4362560 4363467 . - . ID=gene-PUW31_21070;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=pseudogene;locus_tag=PUW31_21070;pseudo=true CP118128.1 Protein Homology CDS 4362560 4363467 . - 0 ID=cds-PUW31_21070;Parent=gene-PUW31_21070;Note=frameshifted;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463151.1;locus_tag=PUW31_21070;product=lipid A hydroxylase LpxO;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4363725 4364159 . - . ID=gene-PUW31_21075;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=PUW31_21075 CP118128.1 Protein Homology CDS 4363725 4364159 . - 0 ID=cds-WJH08533.1;Parent=gene-PUW31_21075;Dbxref=NCBI_GP:WJH08533.1;Name=WJH08533.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=PUW31_21075;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WJH08533.1;transl_table=11 CP118128.1 Genbank gene 4364311 4364754 . - . ID=gene-PUW31_21080;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=PUW31_21080 CP118128.1 Protein Homology CDS 4364311 4364754 . - 0 ID=cds-WJH08534.1;Parent=gene-PUW31_21080;Dbxref=NCBI_GP:WJH08534.1;Name=WJH08534.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463153.1;locus_tag=PUW31_21080;product=VOC family metalloprotein YjdN;protein_id=WJH08534.1;transl_table=11 CP118128.1 Genbank gene 4364874 4365209 . - . ID=gene-PUW31_21085;Name=PUW31_21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21085 CP118128.1 Protein Homology CDS 4364874 4365209 . - 0 ID=cds-WJH08535.1;Parent=gene-PUW31_21085;Dbxref=NCBI_GP:WJH08535.1;Name=WJH08535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463154.1;locus_tag=PUW31_21085;product=zinc ribbon domain-containing protein YjdM;protein_id=WJH08535.1;transl_table=11 CP118128.1 Genbank gene 4365677 4367179 . + . ID=gene-PUW31_21090;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=PUW31_21090 CP118128.1 Protein Homology CDS 4365677 4367179 . + 0 ID=cds-WJH08536.1;Parent=gene-PUW31_21090;Dbxref=NCBI_GP:WJH08536.1;Name=WJH08536.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463155.1;locus_tag=PUW31_21090;product=glycine betaine/L-proline transporter ProP;protein_id=WJH08536.1;transl_table=11 CP118128.1 Genbank gene 4367249 4367338 . + . ID=gene-PUW31_21095;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=PUW31_21095 CP118128.1 Protein Homology CDS 4367249 4367338 . + 0 ID=cds-WJH08537.1;Parent=gene-PUW31_21095;Dbxref=NCBI_GP:WJH08537.1;Name=WJH08537.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844399.1;locus_tag=PUW31_21095;product=LpxT activity modulator PmrR;protein_id=WJH08537.1;transl_table=11 CP118128.1 Genbank gene 4367346 4368416 . - . ID=gene-PUW31_21100;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=PUW31_21100 CP118128.1 Protein Homology CDS 4367346 4368416 . - 0 ID=cds-WJH10805.1;Parent=gene-PUW31_21100;Dbxref=NCBI_GP:WJH10805.1;Name=WJH10805.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463156.1;locus_tag=PUW31_21100;product=two-component system sensor histidine kinase PmrB;protein_id=WJH10805.1;transl_table=11 CP118128.1 Genbank gene 4368426 4369094 . - . ID=gene-PUW31_21105;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=PUW31_21105 CP118128.1 Protein Homology CDS 4368426 4369094 . - 0 ID=cds-WJH08538.1;Parent=gene-PUW31_21105;Dbxref=NCBI_GP:WJH08538.1;Name=WJH08538.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463157.1;locus_tag=PUW31_21105;product=two-component system response regulator PmrA;protein_id=WJH08538.1;transl_table=11 CP118128.1 Genbank gene 4369091 4370734 . - . ID=gene-PUW31_21110;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=PUW31_21110 CP118128.1 Protein Homology CDS 4369091 4370734 . - 0 ID=cds-WJH08539.1;Parent=gene-PUW31_21110;Dbxref=NCBI_GP:WJH08539.1;Name=WJH08539.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463158.1;locus_tag=PUW31_21110;product=phosphoethanolamine transferase EptA;protein_id=WJH08539.1;transl_table=11 CP118128.1 Genbank pseudogene 4370868 4372204 . - . ID=gene-PUW31_21115;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=pseudogene;locus_tag=PUW31_21115;pseudo=true CP118128.1 Protein Homology CDS 4370868 4372204 . - 0 ID=cds-PUW31_21115;Parent=gene-PUW31_21115;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463159.1;locus_tag=PUW31_21115;product=arginine/agmatine antiporter;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 4372344 4373104 . - . ID=gene-PUW31_21120;Name=PUW31_21120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_21120;pseudo=true CP118128.1 Protein Homology CDS 4372344 4373104 . - 0 ID=cds-PUW31_21120;Parent=gene-PUW31_21120;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463160.1;locus_tag=PUW31_21120;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 4373402 4375668 . - . ID=gene-PUW31_21125;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=pseudogene;locus_tag=PUW31_21125;pseudo=true CP118128.1 Protein Homology CDS 4373402 4375668 . - 0 ID=cds-PUW31_21125;Parent=gene-PUW31_21125;Note=frameshifted;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709824.2;locus_tag=PUW31_21125;product=arginine decarboxylase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4375901 4376833 . - . ID=gene-PUW31_21130;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=PUW31_21130 CP118128.1 Protein Homology CDS 4375901 4376833 . - 0 ID=cds-WJH08540.1;Parent=gene-PUW31_21130;Dbxref=NCBI_GP:WJH08540.1;Name=WJH08540.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463162.1;locus_tag=PUW31_21130;product=transcriptional regulator MelR;protein_id=WJH08540.1;transl_table=11 CP118128.1 Genbank gene 4377102 4378457 . + . ID=gene-PUW31_21135;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=PUW31_21135 CP118128.1 Protein Homology CDS 4377102 4378457 . + 0 ID=cds-WJH08541.1;Parent=gene-PUW31_21135;Dbxref=NCBI_GP:WJH08541.1;Name=WJH08541.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463163.1;locus_tag=PUW31_21135;product=alpha-galactosidase;protein_id=WJH08541.1;transl_table=11 CP118128.1 Genbank gene 4378541 4379971 . + . ID=gene-PUW31_21140;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=PUW31_21140 CP118128.1 Protein Homology CDS 4378541 4379971 . + 0 ID=cds-WJH08542.1;Parent=gene-PUW31_21140;Dbxref=NCBI_GP:WJH08542.1;Name=WJH08542.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463164.1;locus_tag=PUW31_21140;product=melibiose:sodium transporter MelB;protein_id=WJH08542.1;transl_table=11 CP118128.1 Genbank pseudogene 4380078 4381723 . - . ID=gene-PUW31_21145;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=pseudogene;locus_tag=PUW31_21145;pseudo=true CP118128.1 Protein Homology CDS 4380078 4381723 . - 0 ID=cds-PUW31_21145;Parent=gene-PUW31_21145;Note=frameshifted;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463165.1;locus_tag=PUW31_21145;product=class I fumarate hydratase FumA;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4381819 4383159 . - . ID=gene-PUW31_21150;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=PUW31_21150 CP118128.1 Protein Homology CDS 4381819 4383159 . - 0 ID=cds-WJH08543.1;Parent=gene-PUW31_21150;Dbxref=NCBI_GP:WJH08543.1;Name=WJH08543.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463166.1;locus_tag=PUW31_21150;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WJH08543.1;transl_table=11 CP118128.1 Genbank gene 4383306 4383572 . - . ID=gene-PUW31_21155;Name=PUW31_21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21155 CP118128.1 Protein Homology CDS 4383306 4383572 . - 0 ID=cds-WJH08544.1;Parent=gene-PUW31_21155;Dbxref=NCBI_GP:WJH08544.1;Name=WJH08544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463167.1;locus_tag=PUW31_21155;product=hypothetical protein;protein_id=WJH08544.1;transl_table=11 CP118128.1 Genbank gene 4383889 4384608 . - . ID=gene-PUW31_21160;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=PUW31_21160 CP118128.1 Protein Homology CDS 4383889 4384608 . - 0 ID=cds-WJH08545.1;Parent=gene-PUW31_21160;Dbxref=NCBI_GP:WJH08545.1;Name=WJH08545.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463168.1;locus_tag=PUW31_21160;product=two-component system response regulator DcuR;protein_id=WJH08545.1;transl_table=11 CP118128.1 Genbank pseudogene 4384605 4386235 . - . ID=gene-PUW31_21165;Name=PUW31_21165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_21165;pseudo=true CP118128.1 Protein Homology CDS 4384605 4386235 . - 0 ID=cds-PUW31_21165;Parent=gene-PUW31_21165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463169.1;locus_tag=PUW31_21165;product=sensor histidine kinase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 4386610 4389039 . + . ID=gene-PUW31_21170;Name=PUW31_21170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_21170;pseudo=true CP118128.1 Protein Homology CDS 4386610 4389039 . + 0 ID=cds-PUW31_21170;Parent=gene-PUW31_21170;Note=internal stop;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403483.1;locus_tag=PUW31_21170;product=molybdopterin-dependent oxidoreductase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4389053 4389679 . + . ID=gene-PUW31_21175;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=PUW31_21175 CP118128.1 Protein Homology CDS 4389053 4389679 . + 0 ID=cds-WJH08546.1;Parent=gene-PUW31_21175;Dbxref=NCBI_GP:WJH08546.1;Name=WJH08546.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463171.1;locus_tag=PUW31_21175;product=dimethylsulfoxide reductase subunit B;protein_id=WJH08546.1;transl_table=11 CP118128.1 Genbank gene 4389672 4390445 . + . ID=gene-PUW31_21180;Name=PUW31_21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21180 CP118128.1 Protein Homology CDS 4389672 4390445 . + 0 ID=cds-WJH08547.1;Parent=gene-PUW31_21180;Dbxref=NCBI_GP:WJH08547.1;Name=WJH08547.1;Ontology_term=GO:0019645,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463172.1;locus_tag=PUW31_21180;product=dimethyl sulfoxide reductase anchor subunit;protein_id=WJH08547.1;transl_table=11 CP118128.1 Genbank gene 4390460 4391113 . + . ID=gene-PUW31_21185;Name=PUW31_21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21185 CP118128.1 Protein Homology CDS 4390460 4391113 . + 0 ID=cds-WJH08548.1;Parent=gene-PUW31_21185;Dbxref=NCBI_GP:WJH08548.1;Name=WJH08548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463173.1;locus_tag=PUW31_21185;product=molecular chaperone;protein_id=WJH08548.1;transl_table=11 CP118128.1 Genbank gene 4391197 4392597 . - . ID=gene-PUW31_21190;Name=PUW31_21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21190 CP118128.1 Protein Homology CDS 4391197 4392597 . - 0 ID=cds-WJH08549.1;Parent=gene-PUW31_21190;Dbxref=NCBI_GP:WJH08549.1;Name=WJH08549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463174.1;locus_tag=PUW31_21190;product=DUF1996 domain-containing protein;protein_id=WJH08549.1;transl_table=11 CP118128.1 Genbank gene 4392901 4393806 . + . ID=gene-PUW31_21195;Name=PUW31_21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21195 CP118128.1 Protein Homology CDS 4392901 4393806 . + 0 ID=cds-WJH08550.1;Parent=gene-PUW31_21195;Dbxref=NCBI_GP:WJH08550.1;Name=WJH08550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463175.1;locus_tag=PUW31_21195;product=YjiK family protein;protein_id=WJH08550.1;transl_table=11 CP118128.1 Genbank pseudogene 4394096 4394227 . - . ID=gene-PUW31_21200;Name=PUW31_21200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_21200;pseudo=true CP118128.1 Protein Homology CDS 4394096 4394227 . - 0 ID=cds-PUW31_21200;Parent=gene-PUW31_21200;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463177.1;locus_tag=PUW31_21200;product=hypothetical protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 4394339 4394587 . - . ID=gene-PUW31_21205;Name=PUW31_21205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_21205;pseudo=true CP118128.1 Protein Homology CDS 4394339 4394587 . - 0 ID=cds-PUW31_21205;Parent=gene-PUW31_21205;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463177.1;locus_tag=PUW31_21205;product=Ig-like domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4394586 4394894 . + . ID=gene-PUW31_21210;Name=PUW31_21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21210 CP118128.1 Protein Homology CDS 4394586 4394894 . + 0 ID=cds-WJH08551.1;Parent=gene-PUW31_21210;Dbxref=NCBI_GP:WJH08551.1;Name=WJH08551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001673658.1;locus_tag=PUW31_21210;product=ABC transporter ATP-binding protein;protein_id=WJH08551.1;transl_table=11 CP118128.1 Genbank gene 4394887 4395174 . - . ID=gene-PUW31_21215;Name=rtsB;gbkey=Gene;gene=rtsB;gene_biotype=protein_coding;locus_tag=PUW31_21215 CP118128.1 Protein Homology CDS 4394887 4395174 . - 0 ID=cds-WJH08552.1;Parent=gene-PUW31_21215;Dbxref=NCBI_GP:WJH08552.1;Name=WJH08552.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rtsB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463179.3;locus_tag=PUW31_21215;product=transcriptional regulator RtsB;protein_id=WJH08552.1;transl_table=11 CP118128.1 Genbank gene 4395171 4396046 . - . ID=gene-PUW31_21220;Name=PUW31_21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21220 CP118128.1 Protein Homology CDS 4395171 4396046 . - 0 ID=cds-WJH08553.1;Parent=gene-PUW31_21220;Dbxref=NCBI_GP:WJH08553.1;Name=WJH08553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463180.1;locus_tag=PUW31_21220;product=AraC family transcriptional regulator;protein_id=WJH08553.1;transl_table=11 CP118128.1 Genbank gene 4396312 4396533 . - . ID=gene-PUW31_21225;Name=PUW31_21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21225 CP118128.1 Protein Homology CDS 4396312 4396533 . - 0 ID=cds-WJH08554.1;Parent=gene-PUW31_21225;Dbxref=NCBI_GP:WJH08554.1;Name=WJH08554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463181.1;locus_tag=PUW31_21225;product=hypothetical protein;protein_id=WJH08554.1;transl_table=11 CP118128.1 Genbank gene 4396850 4397143 . + . ID=gene-PUW31_21230;Name=PUW31_21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21230 CP118128.1 Protein Homology CDS 4396850 4397143 . + 0 ID=cds-WJH08555.1;Parent=gene-PUW31_21230;Dbxref=NCBI_GP:WJH08555.1;Name=WJH08555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463182.1;locus_tag=PUW31_21230;product=DUF1778 domain-containing protein;protein_id=WJH08555.1;transl_table=11 CP118128.1 Genbank gene 4397140 4397631 . + . ID=gene-PUW31_21235;Name=PUW31_21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21235 CP118128.1 Protein Homology CDS 4397140 4397631 . + 0 ID=cds-WJH08556.1;Parent=gene-PUW31_21235;Dbxref=NCBI_GP:WJH08556.1;Name=WJH08556.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463183.1;locus_tag=PUW31_21235;product=GNAT family N-acetyltransferase;protein_id=WJH08556.1;transl_table=11 CP118128.1 Genbank gene 4397879 4398631 . - . ID=gene-PUW31_21240;Name=PUW31_21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21240 CP118128.1 Protein Homology CDS 4397879 4398631 . - 0 ID=cds-WJH08557.1;Parent=gene-PUW31_21240;Dbxref=NCBI_GP:WJH08557.1;Name=WJH08557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463184.1;locus_tag=PUW31_21240;product=non-specific acid phosphatase;protein_id=WJH08557.1;transl_table=11 CP118128.1 Genbank pseudogene 4398731 4398808 . - . ID=gene-PUW31_21245;Name=PUW31_21245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_21245;pseudo=true CP118128.1 Protein Homology CDS 4398731 4398808 . - 0 ID=cds-PUW31_21245;Parent=gene-PUW31_21245;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461948.1;locus_tag=PUW31_21245;product=porin family protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 4399188 4399262 . + . ID=gene-PUW31_21250;Name=PUW31_21250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_21250;pseudo=true CP118128.1 Protein Homology CDS 4399188 4399262 . + 0 ID=cds-PUW31_21250;Parent=gene-PUW31_21250;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000565644.1;locus_tag=PUW31_21250;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4399342 4399417 . - . ID=gene-PUW31_21255;Name=PUW31_21255;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_21255 CP118128.1 tRNAscan-SE tRNA 4399342 4399417 . - . ID=rna-PUW31_21255;Parent=gene-PUW31_21255;anticodon=(pos:complement(4399382..4399384));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_21255;product=tRNA-Phe CP118128.1 tRNAscan-SE exon 4399342 4399417 . - . ID=exon-PUW31_21255-1;Parent=rna-PUW31_21255;anticodon=(pos:complement(4399382..4399384));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_21255;product=tRNA-Phe CP118128.1 Genbank gene 4399533 4400108 . - . ID=gene-PUW31_21260;Name=PUW31_21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21260 CP118128.1 Protein Homology CDS 4399533 4400108 . - 0 ID=cds-WJH08558.1;Parent=gene-PUW31_21260;Dbxref=NCBI_GP:WJH08558.1;Name=WJH08558.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463186.1;locus_tag=PUW31_21260;product=transcriptional regulator;protein_id=WJH08558.1;transl_table=11 CP118128.1 Genbank gene 4400145 4401848 . - . ID=gene-PUW31_21265;Name=PUW31_21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21265 CP118128.1 Protein Homology CDS 4400145 4401848 . - 0 ID=cds-WJH08559.1;Parent=gene-PUW31_21265;Dbxref=NCBI_GP:WJH08559.1;Name=WJH08559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463187.1;locus_tag=PUW31_21265;product=protein-disulfide reductase DsbD;protein_id=WJH08559.1;transl_table=11 CP118128.1 Genbank gene 4401824 4402171 . - . ID=gene-PUW31_21270;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=PUW31_21270 CP118128.1 Protein Homology CDS 4401824 4402171 . - 0 ID=cds-WJH08560.1;Parent=gene-PUW31_21270;Dbxref=NCBI_GP:WJH08560.1;Name=WJH08560.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463188.1;locus_tag=PUW31_21270;product=divalent cation tolerance protein CutA;protein_id=WJH08560.1;transl_table=11 CP118128.1 Genbank gene 4402292 4403593 . - . ID=gene-PUW31_21275;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=PUW31_21275 CP118128.1 Protein Homology CDS 4402292 4403593 . - 0 ID=cds-WJH08561.1;Parent=gene-PUW31_21275;Dbxref=NCBI_GP:WJH08561.1;Name=WJH08561.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463189.1;locus_tag=PUW31_21275;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WJH08561.1;transl_table=11 CP118128.1 Genbank gene 4403708 4405144 . - . ID=gene-PUW31_21280;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=PUW31_21280 CP118128.1 Protein Homology CDS 4403708 4405144 . - 0 ID=cds-WJH08562.1;Parent=gene-PUW31_21280;Dbxref=NCBI_GP:WJH08562.1;Name=WJH08562.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463190.1;locus_tag=PUW31_21280;product=aspartate ammonia-lyase;protein_id=WJH08562.1;transl_table=11 CP118128.1 Genbank gene 4405485 4405961 . + . ID=gene-PUW31_21285;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=PUW31_21285 CP118128.1 Protein Homology CDS 4405485 4405961 . + 0 ID=cds-WJH08563.1;Parent=gene-PUW31_21285;Dbxref=NCBI_GP:WJH08563.1;Name=WJH08563.1;gbkey=CDS;gene=fxsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313148.1;locus_tag=PUW31_21285;product=membrane protein FxsA;protein_id=WJH08563.1;transl_table=11 CP118128.1 Genbank pseudogene 4406020 4407257 . - . ID=gene-PUW31_21290;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=pseudogene;locus_tag=PUW31_21290;pseudo=true CP118128.1 Protein Homology CDS 4406020 4407257 . - 0 ID=cds-PUW31_21290;Parent=gene-PUW31_21290;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463192.1;locus_tag=PUW31_21290;product=L-methionine/branched-chain amino acid transporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4407534 4407827 . + . ID=gene-PUW31_21295;Name=PUW31_21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21295 CP118128.1 Protein Homology CDS 4407534 4407827 . + 0 ID=cds-WJH10806.1;Parent=gene-PUW31_21295;Dbxref=NCBI_GP:WJH10806.1;Name=WJH10806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=PUW31_21295;product=co-chaperone GroES;protein_id=WJH10806.1;transl_table=11 CP118128.1 Genbank gene 4407871 4409517 . + . ID=gene-PUW31_21300;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=PUW31_21300 CP118128.1 Protein Homology CDS 4407871 4409517 . + 0 ID=cds-WJH08564.1;Parent=gene-PUW31_21300;Dbxref=NCBI_GP:WJH08564.1;Name=WJH08564.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=PUW31_21300;product=chaperonin GroEL;protein_id=WJH08564.1;transl_table=11 CP118128.1 Genbank gene 4409761 4410114 . + . ID=gene-PUW31_21305;Name=PUW31_21305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21305 CP118128.1 Protein Homology CDS 4409761 4410114 . + 0 ID=cds-WJH08565.1;Parent=gene-PUW31_21305;Dbxref=NCBI_GP:WJH08565.1;Name=WJH08565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=PUW31_21305;product=DUF4156 domain-containing protein;protein_id=WJH08565.1;transl_table=11 CP118128.1 Genbank pseudogene 4410162 4411019 . - . ID=gene-PUW31_21310;Name=PUW31_21310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_21310;pseudo=true CP118128.1 Protein Homology CDS 4410162 4411019 . - 0 ID=cds-PUW31_21310;Parent=gene-PUW31_21310;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463196.1;locus_tag=PUW31_21310;product=YjeJ family protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4411301 4412329 . - . ID=gene-PUW31_21315;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=PUW31_21315 CP118128.1 Protein Homology CDS 4411301 4412329 . - 0 ID=cds-WJH08566.1;Parent=gene-PUW31_21315;Dbxref=NCBI_GP:WJH08566.1;Name=WJH08566.1;Ontology_term=GO:0072581;gbkey=CDS;gene=epmB;go_process=protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine|0072581||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463197.1;locus_tag=PUW31_21315;product=EF-P beta-lysylation protein EpmB;protein_id=WJH08566.1;transl_table=11 CP118128.1 Genbank gene 4412370 4412936 . + . ID=gene-PUW31_21320;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=PUW31_21320 CP118128.1 Protein Homology CDS 4412370 4412936 . + 0 ID=cds-WJH08567.1;Parent=gene-PUW31_21320;Dbxref=NCBI_GP:WJH08567.1;Name=WJH08567.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=PUW31_21320;product=elongation factor P;protein_id=WJH08567.1;transl_table=11 CP118128.1 Genbank pseudogene 4412997 4413130 . + . ID=gene-PUW31_21325;Name=PUW31_21325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_21325;pseudo=true CP118128.1 Protein Homology CDS 4412997 4413130 . + 0 ID=cds-PUW31_21325;Parent=gene-PUW31_21325;Note=frameshifted;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=PUW31_21325;product=entericidin A/B family lipoprotein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4413238 4413384 . + . ID=gene-PUW31_21330;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=PUW31_21330 CP118128.1 Protein Homology CDS 4413238 4413384 . + 0 ID=cds-WJH08568.1;Parent=gene-PUW31_21330;Dbxref=NCBI_GP:WJH08568.1;Name=WJH08568.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463200.1;locus_tag=PUW31_21330;product=lipoprotein toxin entericidin B;protein_id=WJH08568.1;transl_table=11 CP118128.1 Genbank gene 4413415 4414002 . - . ID=gene-PUW31_21335;Name=PUW31_21335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21335 CP118128.1 Protein Homology CDS 4413415 4414002 . - 0 ID=cds-WJH08569.1;Parent=gene-PUW31_21335;Dbxref=NCBI_GP:WJH08569.1;Name=WJH08569.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463201.1;locus_tag=PUW31_21335;product=LuxR C-terminal-related transcriptional regulator;protein_id=WJH08569.1;transl_table=11 CP118128.1 Genbank gene 4414259 4414576 . + . ID=gene-PUW31_21340;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=PUW31_21340 CP118128.1 Protein Homology CDS 4414259 4414576 . + 0 ID=cds-WJH08570.1;Parent=gene-PUW31_21340;Dbxref=NCBI_GP:WJH08570.1;Name=WJH08570.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463202.1;locus_tag=PUW31_21340;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WJH08570.1;transl_table=11 CP118128.1 Genbank gene 4414593 4415126 . - . ID=gene-PUW31_21345;Name=PUW31_21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21345 CP118128.1 Protein Homology CDS 4414593 4415126 . - 0 ID=cds-WJH08571.1;Parent=gene-PUW31_21345;Dbxref=NCBI_GP:WJH08571.1;Name=WJH08571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463203.1;locus_tag=PUW31_21345;product=lipocalin family protein;protein_id=WJH08571.1;transl_table=11 CP118128.1 Genbank pseudogene 4415238 4415596 . - . ID=gene-PUW31_21350;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=pseudogene;locus_tag=PUW31_21350;pseudo=true CP118128.1 Protein Homology CDS 4415238 4415596 . - 0 ID=cds-PUW31_21350;Parent=gene-PUW31_21350;Note=frameshifted;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463204.1;locus_tag=PUW31_21350;product=fumarate reductase subunit FrdD;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4415607 4416002 . - . ID=gene-PUW31_21355;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=PUW31_21355 CP118128.1 Protein Homology CDS 4415607 4416002 . - 0 ID=cds-WJH08572.1;Parent=gene-PUW31_21355;Dbxref=NCBI_GP:WJH08572.1;Name=WJH08572.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463205.1;locus_tag=PUW31_21355;product=fumarate reductase subunit FrdC;protein_id=WJH08572.1;transl_table=11 CP118128.1 Genbank gene 4416013 4416747 . - . ID=gene-PUW31_21360;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=PUW31_21360 CP118128.1 Protein Homology CDS 4416013 4416747 . - 0 ID=cds-WJH08573.1;Parent=gene-PUW31_21360;Dbxref=NCBI_GP:WJH08573.1;Name=WJH08573.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=PUW31_21360;product=fumarate reductase iron-sulfur protein;protein_id=WJH08573.1;transl_table=11 CP118128.1 Genbank pseudogene 4416740 4418529 . - . ID=gene-PUW31_21365;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=pseudogene;locus_tag=PUW31_21365;pseudo=true CP118128.1 Protein Homology CDS 4416740 4418529 . - 0 ID=cds-PUW31_21365;Parent=gene-PUW31_21365;Note=frameshifted;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463207.1;locus_tag=PUW31_21365;product=fumarate reductase (quinol) flavoprotein subunit;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4418852 4419829 . + . ID=gene-PUW31_21370;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=PUW31_21370 CP118128.1 Protein Homology CDS 4418852 4419829 . + 0 ID=cds-WJH08574.1;Parent=gene-PUW31_21370;Dbxref=NCBI_GP:WJH08574.1;Name=WJH08574.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=PUW31_21370;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WJH08574.1;transl_table=11 CP118128.1 Genbank gene 4420055 4421557 . + . ID=gene-PUW31_21375;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=PUW31_21375 CP118128.1 Protein Homology CDS 4420055 4421557 . + 0 ID=cds-WJH08575.1;Parent=gene-PUW31_21375;Dbxref=NCBI_GP:WJH08575.1;Name=WJH08575.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463209.1;locus_tag=PUW31_21375;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WJH08575.1;transl_table=11 CP118128.1 Genbank gene 4421609 4421923 . + . ID=gene-PUW31_21380;Name=PUW31_21380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21380 CP118128.1 Protein Homology CDS 4421609 4421923 . + 0 ID=cds-WJH08576.1;Parent=gene-PUW31_21380;Dbxref=NCBI_GP:WJH08576.1;Name=WJH08576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463210.1;locus_tag=PUW31_21380;product=YjeO family protein;protein_id=WJH08576.1;transl_table=11 CP118128.1 Genbank gene 4421990 4425316 . - . ID=gene-PUW31_21385;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=PUW31_21385 CP118128.1 Protein Homology CDS 4421990 4425316 . - 0 ID=cds-WJH08577.1;Parent=gene-PUW31_21385;Dbxref=NCBI_GP:WJH08577.1;Name=WJH08577.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463211.1;locus_tag=PUW31_21385;product=miniconductance mechanosensitive channel MscM;protein_id=WJH08577.1;transl_table=11 CP118128.1 Genbank gene 4425335 4426303 . - . ID=gene-PUW31_21390;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=PUW31_21390 CP118128.1 Protein Homology CDS 4425335 4426303 . - 0 ID=cds-WJH08578.1;Parent=gene-PUW31_21390;Dbxref=NCBI_GP:WJH08578.1;Name=WJH08578.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463212.1;locus_tag=PUW31_21390;product=archaetidylserine decarboxylase;protein_id=WJH08578.1;transl_table=11 CP118128.1 Genbank gene 4426395 4427447 . - . ID=gene-PUW31_21395;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=PUW31_21395 CP118128.1 Protein Homology CDS 4426395 4427447 . - 0 ID=cds-WJH08579.1;Parent=gene-PUW31_21395;Dbxref=NCBI_GP:WJH08579.1;Name=WJH08579.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=PUW31_21395;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WJH08579.1;transl_table=11 CP118128.1 Genbank gene 4427554 4428099 . + . ID=gene-PUW31_21400;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=PUW31_21400 CP118128.1 Protein Homology CDS 4427554 4428099 . + 0 ID=cds-WJH08580.1;Parent=gene-PUW31_21400;Dbxref=NCBI_GP:WJH08580.1;Name=WJH08580.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=PUW31_21400;product=oligoribonuclease;protein_id=WJH08580.1;transl_table=11 CP118128.1 Genbank gene 4428161 4428901 . - . ID=gene-PUW31_21405;Name=PUW31_21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21405 CP118128.1 Protein Homology CDS 4428161 4428901 . - 0 ID=cds-WJH08581.1;Parent=gene-PUW31_21405;Dbxref=NCBI_GP:WJH08581.1;Name=WJH08581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463215.3;locus_tag=PUW31_21405;product=arginine ABC transporter substrate-binding protein;protein_id=WJH08581.1;transl_table=11 CP118128.1 Genbank gene 4429200 4429275 . + . ID=gene-PUW31_21410;Name=PUW31_21410;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_21410 CP118128.1 tRNAscan-SE tRNA 4429200 4429275 . + . ID=rna-PUW31_21410;Parent=gene-PUW31_21410;anticodon=(pos:4429233..4429235);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_21410;product=tRNA-Gly CP118128.1 tRNAscan-SE exon 4429200 4429275 . + . ID=exon-PUW31_21410-1;Parent=rna-PUW31_21410;anticodon=(pos:4429233..4429235);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_21410;product=tRNA-Gly CP118128.1 Genbank gene 4429432 4429507 . + . ID=gene-PUW31_21415;Name=PUW31_21415;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_21415 CP118128.1 tRNAscan-SE tRNA 4429432 4429507 . + . ID=rna-PUW31_21415;Parent=gene-PUW31_21415;anticodon=(pos:4429465..4429467);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_21415;product=tRNA-Gly CP118128.1 tRNAscan-SE exon 4429432 4429507 . + . ID=exon-PUW31_21415-1;Parent=rna-PUW31_21415;anticodon=(pos:4429465..4429467);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_21415;product=tRNA-Gly CP118128.1 Genbank gene 4429664 4429739 . + . ID=gene-PUW31_21420;Name=PUW31_21420;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_21420 CP118128.1 tRNAscan-SE tRNA 4429664 4429739 . + . ID=rna-PUW31_21420;Parent=gene-PUW31_21420;anticodon=(pos:4429697..4429699);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_21420;product=tRNA-Gly CP118128.1 tRNAscan-SE exon 4429664 4429739 . + . ID=exon-PUW31_21420-1;Parent=rna-PUW31_21420;anticodon=(pos:4429697..4429699);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_21420;product=tRNA-Gly CP118128.1 Genbank gene 4430009 4431148 . - . ID=gene-PUW31_21425;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=PUW31_21425 CP118128.1 Protein Homology CDS 4430009 4431148 . - 0 ID=cds-WJH08582.1;Parent=gene-PUW31_21425;Dbxref=NCBI_GP:WJH08582.1;Name=WJH08582.1;Ontology_term=GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=PUW31_21425;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WJH08582.1;transl_table=11 CP118128.1 Genbank pseudogene 4431147 4432693 . + . ID=gene-PUW31_21430;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=pseudogene;locus_tag=PUW31_21430;pseudo=true CP118128.1 Protein Homology CDS 4431147 4432693 . + 0 ID=cds-PUW31_21430;Parent=gene-PUW31_21430;Note=frameshifted;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463217.1;locus_tag=PUW31_21430;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4432665 4433126 . + . ID=gene-PUW31_21435;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=PUW31_21435 CP118128.1 Protein Homology CDS 4432665 4433126 . + 0 ID=cds-WJH08583.1;Parent=gene-PUW31_21435;Dbxref=NCBI_GP:WJH08583.1;Name=WJH08583.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463218.1;locus_tag=PUW31_21435;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WJH08583.1;transl_table=11 CP118128.1 Genbank gene 4433143 4434462 . + . ID=gene-PUW31_21440;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=PUW31_21440 CP118128.1 Protein Homology CDS 4433143 4434462 . + 0 ID=cds-WJH08584.1;Parent=gene-PUW31_21440;Dbxref=NCBI_GP:WJH08584.1;Name=WJH08584.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463219.1;locus_tag=PUW31_21440;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WJH08584.1;transl_table=11 CP118128.1 Genbank gene 4434472 4436328 . + . ID=gene-PUW31_21445;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=PUW31_21445 CP118128.1 Protein Homology CDS 4434472 4436328 . + 0 ID=cds-WJH08585.1;Parent=gene-PUW31_21445;Dbxref=NCBI_GP:WJH08585.1;Name=WJH08585.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463220.1;locus_tag=PUW31_21445;product=DNA mismatch repair endonuclease MutL;protein_id=WJH08585.1;transl_table=11 CP118128.1 Genbank gene 4436321 4437271 . + . ID=gene-PUW31_21450;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=PUW31_21450 CP118128.1 Protein Homology CDS 4436321 4437271 . + 0 ID=cds-WJH08586.1;Parent=gene-PUW31_21450;Dbxref=NCBI_GP:WJH08586.1;Name=WJH08586.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463221.1;locus_tag=PUW31_21450;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WJH08586.1;transl_table=11 CP118128.1 Genbank gene 4437354 4437662 . + . ID=gene-PUW31_21455;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=PUW31_21455 CP118128.1 Protein Homology CDS 4437354 4437662 . + 0 ID=cds-WJH08587.1;Parent=gene-PUW31_21455;Dbxref=NCBI_GP:WJH08587.1;Name=WJH08587.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463222.1;locus_tag=PUW31_21455;product=RNA chaperone Hfq;protein_id=WJH08587.1;transl_table=11 CP118128.1 Genbank gene 4437734 4439014 . + . ID=gene-PUW31_21460;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=PUW31_21460 CP118128.1 Protein Homology CDS 4437734 4439014 . + 0 ID=cds-WJH08588.1;Parent=gene-PUW31_21460;Dbxref=NCBI_GP:WJH08588.1;Name=WJH08588.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463223.1;locus_tag=PUW31_21460;product=GTPase HflX;protein_id=WJH08588.1;transl_table=11 CP118128.1 Genbank gene 4439229 4440488 . + . ID=gene-PUW31_21465;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=PUW31_21465 CP118128.1 Protein Homology CDS 4439229 4440488 . + 0 ID=cds-WJH08589.1;Parent=gene-PUW31_21465;Dbxref=NCBI_GP:WJH08589.1;Name=WJH08589.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463224.1;locus_tag=PUW31_21465;product=FtsH protease activity modulator HflK;protein_id=WJH08589.1;transl_table=11 CP118128.1 Genbank gene 4440491 4441495 . + . ID=gene-PUW31_21470;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=PUW31_21470 CP118128.1 Protein Homology CDS 4440491 4441495 . + 0 ID=cds-WJH08590.1;Parent=gene-PUW31_21470;Dbxref=NCBI_GP:WJH08590.1;Name=WJH08590.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463225.1;locus_tag=PUW31_21470;product=protease modulator HflC;protein_id=WJH08590.1;transl_table=11 CP118128.1 Genbank gene 4441574 4441771 . + . ID=gene-PUW31_21475;Name=PUW31_21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21475 CP118128.1 Protein Homology CDS 4441574 4441771 . + 0 ID=cds-WJH08591.1;Parent=gene-PUW31_21475;Dbxref=NCBI_GP:WJH08591.1;Name=WJH08591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463226.1;locus_tag=PUW31_21475;product=DUF2065 family protein;protein_id=WJH08591.1;transl_table=11 CP118128.1 Genbank gene 4441874 4443172 . + . ID=gene-PUW31_21480;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=PUW31_21480 CP118128.1 Protein Homology CDS 4441874 4443172 . + 0 ID=cds-WJH08592.1;Parent=gene-PUW31_21480;Dbxref=NCBI_GP:WJH08592.1;Name=WJH08592.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=PUW31_21480;product=adenylosuccinate synthase;protein_id=WJH08592.1;transl_table=11 CP118128.1 Genbank gene 4443380 4443805 . + . ID=gene-PUW31_21485;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=PUW31_21485 CP118128.1 Protein Homology CDS 4443380 4443805 . + 0 ID=cds-WJH08593.1;Parent=gene-PUW31_21485;Dbxref=NCBI_GP:WJH08593.1;Name=WJH08593.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=PUW31_21485;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WJH08593.1;transl_table=11 CP118128.1 Genbank gene 4443843 4446281 . + . ID=gene-PUW31_21490;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=PUW31_21490 CP118128.1 Protein Homology CDS 4443843 4446281 . + 0 ID=cds-WJH08594.1;Parent=gene-PUW31_21490;Dbxref=NCBI_GP:WJH08594.1;Name=WJH08594.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=ribonuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463229.1;locus_tag=PUW31_21490;product=ribonuclease R;protein_id=WJH08594.1;transl_table=11 CP118128.1 Genbank gene 4446372 4447103 . + . ID=gene-PUW31_21495;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=PUW31_21495 CP118128.1 Protein Homology CDS 4446372 4447103 . + 0 ID=cds-WJH08595.1;Parent=gene-PUW31_21495;Dbxref=NCBI_GP:WJH08595.1;Name=WJH08595.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463230.1;locus_tag=PUW31_21495;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WJH08595.1;transl_table=11 CP118128.1 Genbank gene 4447235 4447639 . + . ID=gene-PUW31_21500;Name=PUW31_21500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21500 CP118128.1 Protein Homology CDS 4447235 4447639 . + 0 ID=cds-WJH08596.1;Parent=gene-PUW31_21500;Dbxref=NCBI_GP:WJH08596.1;Name=WJH08596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463231.1;locus_tag=PUW31_21500;product=DUF2170 family protein;protein_id=WJH08596.1;transl_table=11 CP118128.1 Genbank gene 4447654 4448352 . + . ID=gene-PUW31_21505;Name=PUW31_21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21505 CP118128.1 Protein Homology CDS 4447654 4448352 . + 0 ID=cds-WJH08597.1;Parent=gene-PUW31_21505;Dbxref=NCBI_GP:WJH08597.1;Name=WJH08597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463232.1;locus_tag=PUW31_21505;product=PspA/IM30 family protein;protein_id=WJH08597.1;transl_table=11 CP118128.1 Genbank gene 4448352 4449422 . + . ID=gene-PUW31_21510;Name=PUW31_21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21510 CP118128.1 Protein Homology CDS 4448352 4449422 . + 0 ID=cds-WJH08598.1;Parent=gene-PUW31_21510;Dbxref=NCBI_GP:WJH08598.1;Name=WJH08598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463233.1;locus_tag=PUW31_21510;product=ion channel;protein_id=WJH08598.1;transl_table=11 CP118128.1 Genbank gene 4449395 4450078 . + . ID=gene-PUW31_21515;Name=PUW31_21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21515 CP118128.1 Protein Homology CDS 4449395 4450078 . + 0 ID=cds-WJH08599.1;Parent=gene-PUW31_21515;Dbxref=NCBI_GP:WJH08599.1;Name=WJH08599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463234.3;locus_tag=PUW31_21515;product=YjfK family protein;protein_id=WJH08599.1;transl_table=11 CP118128.1 Genbank pseudogene 4450096 4450493 . + . ID=gene-PUW31_21520;Name=PUW31_21520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_21520;pseudo=true CP118128.1 Protein Homology CDS 4450096 4450493 . + 0 ID=cds-PUW31_21520;Parent=gene-PUW31_21520;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463235.1;locus_tag=PUW31_21520;product=DUF350 domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4450503 4451141 . + . ID=gene-PUW31_21525;Name=PUW31_21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21525 CP118128.1 Protein Homology CDS 4450503 4451141 . + 0 ID=cds-WJH08600.1;Parent=gene-PUW31_21525;Dbxref=NCBI_GP:WJH08600.1;Name=WJH08600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463236.1;locus_tag=PUW31_21525;product=DUF1190 domain-containing protein;protein_id=WJH08600.1;transl_table=11 CP118128.1 Genbank gene 4451144 4452307 . + . ID=gene-PUW31_21530;Name=PUW31_21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21530 CP118128.1 Protein Homology CDS 4451144 4452307 . + 0 ID=cds-WJH08601.1;Parent=gene-PUW31_21530;Dbxref=NCBI_GP:WJH08601.1;Name=WJH08601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463237.1;locus_tag=PUW31_21530;product=glutathionylspermidine synthase family protein;protein_id=WJH08601.1;transl_table=11 CP118128.1 Genbank pseudogene 4452392 4454010 . + . ID=gene-PUW31_21535;Name=PUW31_21535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_21535;pseudo=true CP118128.1 Protein Homology CDS 4452392 4454010 . + 0 ID=cds-PUW31_21535;Parent=gene-PUW31_21535;Note=frameshifted;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463238.3;locus_tag=PUW31_21535;product=isovaleryl-CoA dehydrogenase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4454055 4454330 . - . ID=gene-PUW31_21540;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=PUW31_21540 CP118128.1 Protein Homology CDS 4454055 4454330 . - 0 ID=cds-WJH08602.1;Parent=gene-PUW31_21540;Dbxref=NCBI_GP:WJH08602.1;Name=WJH08602.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134428.1;locus_tag=PUW31_21540;product=DUF1471 family protease activator YjfN;protein_id=WJH08602.1;transl_table=11 CP118128.1 Genbank gene 4454461 4454790 . - . ID=gene-PUW31_21545;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=PUW31_21545 CP118128.1 Protein Homology CDS 4454461 4454790 . - 0 ID=cds-WJH08603.1;Parent=gene-PUW31_21545;Dbxref=NCBI_GP:WJH08603.1;Name=WJH08603.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463240.1;locus_tag=PUW31_21545;product=biofilm peroxide resistance protein BsmA;protein_id=WJH08603.1;transl_table=11 CP118128.1 Genbank gene 4454974 4455723 . + . ID=gene-PUW31_21550;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=PUW31_21550 CP118128.1 Protein Homology CDS 4454974 4455723 . + 0 ID=cds-WJH08604.1;Parent=gene-PUW31_21550;Dbxref=NCBI_GP:WJH08604.1;Name=WJH08604.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463241.1;locus_tag=PUW31_21550;product=esterase;protein_id=WJH08604.1;transl_table=11 CP118128.1 Genbank gene 4455720 4456475 . - . ID=gene-PUW31_21555;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=PUW31_21555 CP118128.1 Protein Homology CDS 4455720 4456475 . - 0 ID=cds-WJH08605.1;Parent=gene-PUW31_21555;Dbxref=NCBI_GP:WJH08605.1;Name=WJH08605.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463242.1;locus_tag=PUW31_21555;product=HTH-type transcriptional regulator UlaR;protein_id=WJH08605.1;transl_table=11 CP118128.1 Genbank gene 4456580 4457644 . - . ID=gene-PUW31_21560;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=PUW31_21560 CP118128.1 Protein Homology CDS 4456580 4457644 . - 0 ID=cds-WJH08606.1;Parent=gene-PUW31_21560;Dbxref=NCBI_GP:WJH08606.1;Name=WJH08606.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=PUW31_21560;product=L-ascorbate 6-phosphate lactonase;protein_id=WJH08606.1;transl_table=11 CP118128.1 Genbank gene 4458007 4459404 . + . ID=gene-PUW31_21565;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=PUW31_21565 CP118128.1 Protein Homology CDS 4458007 4459404 . + 0 ID=cds-WJH08607.1;Parent=gene-PUW31_21565;Dbxref=NCBI_GP:WJH08607.1;Name=WJH08607.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=PUW31_21565;product=PTS ascorbate transporter subunit IIC;protein_id=WJH08607.1;transl_table=11 CP118128.1 Genbank gene 4459420 4459725 . + . ID=gene-PUW31_21570;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=PUW31_21570 CP118128.1 Protein Homology CDS 4459420 4459725 . + 0 ID=cds-WJH08608.1;Parent=gene-PUW31_21570;Dbxref=NCBI_GP:WJH08608.1;Name=WJH08608.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313197.1;locus_tag=PUW31_21570;product=PTS ascorbate transporter subunit IIB;protein_id=WJH08608.1;transl_table=11 CP118128.1 Genbank gene 4459735 4460199 . + . ID=gene-PUW31_21575;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=PUW31_21575 CP118128.1 Protein Homology CDS 4459735 4460199 . + 0 ID=cds-WJH08609.1;Parent=gene-PUW31_21575;Dbxref=NCBI_GP:WJH08609.1;Name=WJH08609.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463246.1;locus_tag=PUW31_21575;product=PTS ascorbate transporter subunit IIA;protein_id=WJH08609.1;transl_table=11 CP118128.1 Genbank gene 4460213 4460863 . + . ID=gene-PUW31_21580;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=PUW31_21580 CP118128.1 Protein Homology CDS 4460213 4460863 . + 0 ID=cds-WJH08610.1;Parent=gene-PUW31_21580;Dbxref=NCBI_GP:WJH08610.1;Name=WJH08610.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463247.1;locus_tag=PUW31_21580;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WJH08610.1;transl_table=11 CP118128.1 Genbank gene 4460873 4461727 . + . ID=gene-PUW31_21585;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=PUW31_21585 CP118128.1 Protein Homology CDS 4460873 4461727 . + 0 ID=cds-WJH08611.1;Parent=gene-PUW31_21585;Dbxref=NCBI_GP:WJH08611.1;Name=WJH08611.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463248.1;locus_tag=PUW31_21585;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WJH08611.1;transl_table=11 CP118128.1 Genbank gene 4461727 4462413 . + . ID=gene-PUW31_21590;Name=PUW31_21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21590 CP118128.1 Protein Homology CDS 4461727 4462413 . + 0 ID=cds-WJH08612.1;Parent=gene-PUW31_21590;Dbxref=NCBI_GP:WJH08612.1;Name=WJH08612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463249.1;locus_tag=PUW31_21590;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WJH08612.1;transl_table=11 CP118128.1 Genbank gene 4462542 4462817 . - . ID=gene-PUW31_21595;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=PUW31_21595 CP118128.1 Protein Homology CDS 4462542 4462817 . - 0 ID=cds-WJH10807.1;Parent=gene-PUW31_21595;Dbxref=NCBI_GP:WJH10807.1;Name=WJH10807.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463250.1;locus_tag=PUW31_21595;product=DUF1471 family protein YjfY;protein_id=WJH10807.1;transl_table=11 CP118128.1 Genbank pseudogene 4463011 4463216 . + . ID=gene-PUW31_21600;Name=PUW31_21600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_21600;pseudo=true CP118128.1 Protein Homology CDS 4463011 4463216 . + 0 ID=cds-PUW31_21600;Parent=gene-PUW31_21600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463251.1;locus_tag=PUW31_21600;product=hypothetical protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4463287 4463682 . + . ID=gene-PUW31_21605;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=PUW31_21605 CP118128.1 Protein Homology CDS 4463287 4463682 . + 0 ID=cds-WJH08613.1;Parent=gene-PUW31_21605;Dbxref=NCBI_GP:WJH08613.1;Name=WJH08613.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=PUW31_21605;product=30S ribosomal protein S6;protein_id=WJH08613.1;transl_table=11 CP118128.1 Genbank gene 4463689 4464003 . + . ID=gene-PUW31_21610;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=PUW31_21610 CP118128.1 Protein Homology CDS 4463689 4464003 . + 0 ID=cds-WJH08614.1;Parent=gene-PUW31_21610;Dbxref=NCBI_GP:WJH08614.1;Name=WJH08614.1;Ontology_term=GO:0006269,GO:0003697;gbkey=CDS;gene=priB;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463253.1;locus_tag=PUW31_21610;product=primosomal replication protein N;protein_id=WJH08614.1;transl_table=11 CP118128.1 Genbank gene 4464008 4464235 . + . ID=gene-PUW31_21615;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=PUW31_21615 CP118128.1 Protein Homology CDS 4464008 4464235 . + 0 ID=cds-WJH08615.1;Parent=gene-PUW31_21615;Dbxref=NCBI_GP:WJH08615.1;Name=WJH08615.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=PUW31_21615;product=30S ribosomal protein S18;protein_id=WJH08615.1;transl_table=11 CP118128.1 Genbank gene 4464277 4464726 . + . ID=gene-PUW31_21620;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=PUW31_21620 CP118128.1 Protein Homology CDS 4464277 4464726 . + 0 ID=cds-WJH08616.1;Parent=gene-PUW31_21620;Dbxref=NCBI_GP:WJH08616.1;Name=WJH08616.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=PUW31_21620;product=50S ribosomal protein L9;protein_id=WJH08616.1;transl_table=11 CP118128.1 Genbank pseudogene 4464874 4465799 . + . ID=gene-PUW31_21625;Name=PUW31_21625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_21625;pseudo=true CP118128.1 Protein Homology CDS 4464874 4465799 . + 0 ID=cds-PUW31_21625;Parent=gene-PUW31_21625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463256.1;locus_tag=PUW31_21625;product=DMT family transporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4465849 4466484 . - . ID=gene-PUW31_21630;Name=PUW31_21630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21630 CP118128.1 Protein Homology CDS 4465849 4466484 . - 0 ID=cds-WJH08617.1;Parent=gene-PUW31_21630;Dbxref=NCBI_GP:WJH08617.1;Name=WJH08617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463257.1;locus_tag=PUW31_21630;product=OapA family protein;protein_id=WJH08617.1;transl_table=11 CP118128.1 Genbank gene 4466704 4467324 . + . ID=gene-PUW31_21635;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=PUW31_21635 CP118128.1 Protein Homology CDS 4466704 4467324 . + 0 ID=cds-WJH08618.1;Parent=gene-PUW31_21635;Dbxref=NCBI_GP:WJH08618.1;Name=WJH08618.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=PUW31_21635;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WJH08618.1;transl_table=11 CP118128.1 Genbank gene 4467620 4469023 . + . ID=gene-PUW31_21640;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=PUW31_21640 CP118128.1 Protein Homology CDS 4467620 4469023 . + 0 ID=cds-WJH08619.1;Parent=gene-PUW31_21640;Dbxref=NCBI_GP:WJH08619.1;Name=WJH08619.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541380.1;locus_tag=PUW31_21640;product=D-serine/D-alanine/glycine transporter;protein_id=WJH08619.1;transl_table=11 CP118128.1 Genbank gene 4469361 4470500 . + . ID=gene-PUW31_21645;Name=PUW31_21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21645 CP118128.1 Protein Homology CDS 4469361 4470500 . + 0 ID=cds-WJH08620.1;Parent=gene-PUW31_21645;Dbxref=NCBI_GP:WJH08620.1;Name=WJH08620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155541.1;locus_tag=PUW31_21645;product=DKNYY domain-containing protein;protein_id=WJH08620.1;transl_table=11 CP118128.1 Genbank gene 4470515 4471903 . + . ID=gene-PUW31_21650;Name=PUW31_21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21650 CP118128.1 Protein Homology CDS 4470515 4471903 . + 0 ID=cds-WJH08621.1;Parent=gene-PUW31_21650;Dbxref=NCBI_GP:WJH08621.1;Name=WJH08621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000944334.1;locus_tag=PUW31_21650;product=hypothetical protein;protein_id=WJH08621.1;transl_table=11 CP118128.1 Genbank gene 4471970 4472632 . - . ID=gene-PUW31_21655;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=PUW31_21655 CP118128.1 Protein Homology CDS 4471970 4472632 . - 0 ID=cds-WJH08622.1;Parent=gene-PUW31_21655;Dbxref=NCBI_GP:WJH08622.1;Name=WJH08622.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463260.1;locus_tag=PUW31_21655;product=iron-sulfur cluster repair protein YtfE;protein_id=WJH08622.1;transl_table=11 CP118128.1 Genbank pseudogene 4472735 4473699 . - . ID=gene-PUW31_21660;Name=PUW31_21660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_21660;pseudo=true CP118128.1 Protein Homology CDS 4472735 4473699 . - 0 ID=cds-PUW31_21660;Parent=gene-PUW31_21660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463261.1;locus_tag=PUW31_21660;product=DMT family transporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4473780 4474628 . - . ID=gene-PUW31_21665;Name=PUW31_21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21665 CP118128.1 Protein Homology CDS 4473780 4474628 . - 0 ID=cds-WJH08623.1;Parent=gene-PUW31_21665;Dbxref=NCBI_GP:WJH08623.1;Name=WJH08623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463262.1;locus_tag=PUW31_21665;product=SDR family oxidoreductase;protein_id=WJH08623.1;transl_table=11 CP118128.1 Genbank gene 4474716 4475102 . + . ID=gene-PUW31_21670;Name=PUW31_21670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21670 CP118128.1 Protein Homology CDS 4474716 4475102 . + 0 ID=cds-WJH08624.1;Parent=gene-PUW31_21670;Dbxref=NCBI_GP:WJH08624.1;Name=WJH08624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463263.1;locus_tag=PUW31_21670;product=helix-turn-helix domain-containing protein;protein_id=WJH08624.1;transl_table=11 CP118128.1 Genbank gene 4475160 4477103 . - . ID=gene-PUW31_21675;Name=PUW31_21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21675 CP118128.1 Protein Homology CDS 4475160 4477103 . - 0 ID=cds-WJH08625.1;Parent=gene-PUW31_21675;Dbxref=NCBI_GP:WJH08625.1;Name=WJH08625.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463264.1;locus_tag=PUW31_21675;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WJH08625.1;transl_table=11 CP118128.1 Genbank gene 4477371 4478111 . + . ID=gene-PUW31_21680;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=PUW31_21680 CP118128.1 Protein Homology CDS 4477371 4478111 . + 0 ID=cds-WJH08626.1;Parent=gene-PUW31_21680;Dbxref=NCBI_GP:WJH08626.1;Name=WJH08626.1;Ontology_term=GO:0046855,GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;go_process=inositol phosphate dephosphorylation|0046855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=PUW31_21680;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WJH08626.1;transl_table=11 CP118128.1 Genbank gene 4478101 4478658 . - . ID=gene-PUW31_21685;Name=PUW31_21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21685 CP118128.1 Protein Homology CDS 4478101 4478658 . - 0 ID=cds-WJH08627.1;Parent=gene-PUW31_21685;Dbxref=NCBI_GP:WJH08627.1;Name=WJH08627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463266.1;locus_tag=PUW31_21685;product=YtfJ family protein;protein_id=WJH08627.1;transl_table=11 CP118128.1 Genbank gene 4478985 4479191 . + . ID=gene-PUW31_21690;Name=PUW31_21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21690 CP118128.1 Protein Homology CDS 4478985 4479191 . + 0 ID=cds-WJH08628.1;Parent=gene-PUW31_21690;Dbxref=NCBI_GP:WJH08628.1;Name=WJH08628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=PUW31_21690;product=DUF1107 domain-containing protein;protein_id=WJH08628.1;transl_table=11 CP118128.1 Genbank gene 4479276 4480619 . - . ID=gene-PUW31_21695;Name=PUW31_21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21695 CP118128.1 Protein Homology CDS 4479276 4480619 . - 0 ID=cds-WJH08629.1;Parent=gene-PUW31_21695;Dbxref=NCBI_GP:WJH08629.1;Name=WJH08629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463268.1;locus_tag=PUW31_21695;product=hemolysin family protein;protein_id=WJH08629.1;transl_table=11 CP118128.1 Genbank gene 4480802 4481440 . - . ID=gene-PUW31_21700;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=PUW31_21700 CP118128.1 Protein Homology CDS 4480802 4481440 . - 0 ID=cds-WJH08630.1;Parent=gene-PUW31_21700;Dbxref=NCBI_GP:WJH08630.1;Name=WJH08630.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463269.1;locus_tag=PUW31_21700;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WJH08630.1;transl_table=11 CP118128.1 Genbank gene 4481653 4483386 . + . ID=gene-PUW31_21705;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=PUW31_21705 CP118128.1 Protein Homology CDS 4481653 4483386 . + 0 ID=cds-WJH08631.1;Parent=gene-PUW31_21705;Dbxref=NCBI_GP:WJH08631.1;Name=WJH08631.1;gbkey=CDS;gene=tamA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463270.1;locus_tag=PUW31_21705;product=autotransporter assembly complex protein TamA;protein_id=WJH08631.1;transl_table=11 CP118128.1 Genbank gene 4483383 4487162 . + . ID=gene-PUW31_21710;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=PUW31_21710 CP118128.1 Protein Homology CDS 4483383 4487162 . + 0 ID=cds-WJH08632.1;Parent=gene-PUW31_21710;Dbxref=NCBI_GP:WJH08632.1;Name=WJH08632.1;gbkey=CDS;gene=tamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463271.1;locus_tag=PUW31_21710;product=autotransporter assembly complex protein TamB;protein_id=WJH08632.1;transl_table=11 CP118128.1 Genbank gene 4487165 4487509 . + . ID=gene-PUW31_21715;Name=PUW31_21715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21715 CP118128.1 Protein Homology CDS 4487165 4487509 . + 0 ID=cds-WJH08633.1;Parent=gene-PUW31_21715;Dbxref=NCBI_GP:WJH08633.1;Name=WJH08633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463272.1;locus_tag=PUW31_21715;product=gamma-glutamylcyclotransferase;protein_id=WJH08633.1;transl_table=11 CP118128.1 Genbank gene 4487563 4488768 . - . ID=gene-PUW31_21720;Name=PUW31_21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21720 CP118128.1 Protein Homology CDS 4487563 4488768 . - 0 ID=cds-WJH08634.1;Parent=gene-PUW31_21720;Dbxref=NCBI_GP:WJH08634.1;Name=WJH08634.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463273.1;locus_tag=PUW31_21720;product=MFS transporter;protein_id=WJH08634.1;transl_table=11 CP118128.1 Genbank pseudogene 4488765 4489928 . - . ID=gene-PUW31_21725;Name=PUW31_21725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_21725;pseudo=true CP118128.1 Protein Homology CDS 4488765 4489928 . - 0 ID=cds-PUW31_21725;Parent=gene-PUW31_21725;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463274.1;locus_tag=PUW31_21725;product=metallo-dependent hydrolase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4490338 4490868 . - . ID=gene-PUW31_21730;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=PUW31_21730 CP118128.1 Protein Homology CDS 4490338 4490868 . - 0 ID=cds-WJH08635.1;Parent=gene-PUW31_21730;Dbxref=NCBI_GP:WJH08635.1;Name=WJH08635.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=PUW31_21730;product=inorganic diphosphatase;protein_id=WJH08635.1;transl_table=11 CP118128.1 Genbank gene 4491095 4492093 . - . ID=gene-PUW31_21735;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=PUW31_21735 CP118128.1 Protein Homology CDS 4491095 4492093 . - 0 ID=cds-WJH08636.1;Parent=gene-PUW31_21735;Dbxref=NCBI_GP:WJH08636.1;Name=WJH08636.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=PUW31_21735;product=class 1 fructose-bisphosphatase;protein_id=WJH08636.1;transl_table=11 CP118128.1 Genbank gene 4492268 4493641 . + . ID=gene-PUW31_21740;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=PUW31_21740 CP118128.1 Protein Homology CDS 4492268 4493641 . + 0 ID=cds-WJH08637.1;Parent=gene-PUW31_21740;Dbxref=NCBI_GP:WJH08637.1;Name=WJH08637.1;Ontology_term=GO:0009252,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001219850.1;locus_tag=PUW31_21740;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WJH08637.1;transl_table=11 CP118128.1 Genbank gene 4493748 4494299 . - . ID=gene-PUW31_21745;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=PUW31_21745 CP118128.1 Protein Homology CDS 4493748 4494299 . - 0 ID=cds-WJH08638.1;Parent=gene-PUW31_21745;Dbxref=NCBI_GP:WJH08638.1;Name=WJH08638.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463298.1;locus_tag=PUW31_21745;product=ribosome biogenesis factor YjgA;protein_id=WJH08638.1;transl_table=11 CP118128.1 Genbank gene 4494395 4495747 . + . ID=gene-PUW31_21750;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=PUW31_21750 CP118128.1 Protein Homology CDS 4494395 4495747 . + 0 ID=cds-WJH08639.1;Parent=gene-PUW31_21750;Dbxref=NCBI_GP:WJH08639.1;Name=WJH08639.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463299.1;locus_tag=PUW31_21750;product=metalloprotease PmbA;protein_id=WJH08639.1;transl_table=11 CP118128.1 Genbank gene 4495846 4496232 . + . ID=gene-PUW31_21755;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=PUW31_21755 CP118128.1 Protein Homology CDS 4495846 4496232 . + 0 ID=cds-WJH08640.1;Parent=gene-PUW31_21755;Dbxref=NCBI_GP:WJH08640.1;Name=WJH08640.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463300.1;locus_tag=PUW31_21755;product=cytochrome b562;protein_id=WJH08640.1;transl_table=11 CP118128.1 Genbank gene 4496510 4496848 . + . ID=gene-PUW31_21760;Name=PUW31_21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21760 CP118128.1 Protein Homology CDS 4496510 4496848 . + 0 ID=cds-WJH08641.1;Parent=gene-PUW31_21760;Dbxref=NCBI_GP:WJH08641.1;Name=WJH08641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463301.1;locus_tag=PUW31_21760;product=glycine dehydrogenase;protein_id=WJH08641.1;transl_table=11 CP118128.1 Genbank pseudogene 4496859 4497220 . + . ID=gene-PUW31_21765;Name=PUW31_21765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_21765;pseudo=true CP118128.1 Protein Homology CDS 4496859 4497220 . + 0 ID=cds-PUW31_21765;Parent=gene-PUW31_21765;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463302.1;locus_tag=PUW31_21765;product=SFCGS family glycine-rich protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4497220 4497522 . + . ID=gene-PUW31_21770;Name=PUW31_21770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21770 CP118128.1 Protein Homology CDS 4497220 4497522 . + 0 ID=cds-WJH08642.1;Parent=gene-PUW31_21770;Dbxref=NCBI_GP:WJH08642.1;Name=WJH08642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463303.1;locus_tag=PUW31_21770;product=DUF4312 family protein;protein_id=WJH08642.1;transl_table=11 CP118128.1 Genbank pseudogene 4497545 4498320 . + . ID=gene-PUW31_21775;Name=PUW31_21775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_21775;pseudo=true CP118128.1 Protein Homology CDS 4497545 4498320 . + 0 ID=cds-PUW31_21775;Parent=gene-PUW31_21775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463304.1;locus_tag=PUW31_21775;product=DUF4311 domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4498332 4498976 . + . ID=gene-PUW31_21780;Name=PUW31_21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21780 CP118128.1 Protein Homology CDS 4498332 4498976 . + 0 ID=cds-WJH08643.1;Parent=gene-PUW31_21780;Dbxref=NCBI_GP:WJH08643.1;Name=WJH08643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463305.1;locus_tag=PUW31_21780;product=DUF4310 family protein;protein_id=WJH08643.1;transl_table=11 CP118128.1 Genbank gene 4499035 4500168 . + . ID=gene-PUW31_21785;Name=PUW31_21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21785 CP118128.1 Protein Homology CDS 4499035 4500168 . + 0 ID=cds-WJH08644.1;Parent=gene-PUW31_21785;Dbxref=NCBI_GP:WJH08644.1;Name=WJH08644.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463306.1;locus_tag=PUW31_21785;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=WJH08644.1;transl_table=11 CP118128.1 Genbank gene 4500152 4501270 . + . ID=gene-PUW31_21790;Name=PUW31_21790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21790 CP118128.1 Protein Homology CDS 4500152 4501270 . + 0 ID=cds-WJH08645.1;Parent=gene-PUW31_21790;Dbxref=NCBI_GP:WJH08645.1;Name=WJH08645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463307.1;locus_tag=PUW31_21790;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=WJH08645.1;transl_table=11 CP118128.1 Genbank pseudogene 4501267 4502007 . + . ID=gene-PUW31_21795;Name=PUW31_21795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_21795;pseudo=true CP118128.1 Protein Homology CDS 4501267 4502007 . + 0 ID=cds-PUW31_21795;Parent=gene-PUW31_21795;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463308.2;locus_tag=PUW31_21795;product=KDGP aldolase family protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4502024 4503937 . + . ID=gene-PUW31_21800;Name=PUW31_21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21800 CP118128.1 Protein Homology CDS 4502024 4503937 . + 0 ID=cds-WJH08646.1;Parent=gene-PUW31_21800;Dbxref=NCBI_GP:WJH08646.1;Name=WJH08646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463309.1;locus_tag=PUW31_21800;product=BglG family transcription antiterminator;protein_id=WJH08646.1;transl_table=11 CP118128.1 Genbank gene 4504015 4504257 . + . ID=gene-PUW31_21805;Name=PUW31_21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21805 CP118128.1 Protein Homology CDS 4504015 4504257 . + 0 ID=cds-WJH08647.1;Parent=gene-PUW31_21805;Dbxref=NCBI_GP:WJH08647.1;Name=WJH08647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463310.1;locus_tag=PUW31_21805;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WJH08647.1;transl_table=11 CP118128.1 Genbank gene 4504247 4504531 . + . ID=gene-PUW31_21810;Name=PUW31_21810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21810 CP118128.1 Protein Homology CDS 4504247 4504531 . + 0 ID=cds-WJH08648.1;Parent=gene-PUW31_21810;Dbxref=NCBI_GP:WJH08648.1;Name=WJH08648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463311.1;locus_tag=PUW31_21810;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WJH08648.1;transl_table=11 CP118128.1 Genbank gene 4504535 4504999 . - . ID=gene-PUW31_21815;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=PUW31_21815 CP118128.1 Protein Homology CDS 4504535 4504999 . - 0 ID=cds-WJH08649.1;Parent=gene-PUW31_21815;Dbxref=NCBI_GP:WJH08649.1;Name=WJH08649.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463312.1;locus_tag=PUW31_21815;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WJH08649.1;transl_table=11 CP118128.1 Genbank gene 4505121 4507259 . - . ID=gene-PUW31_21820;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=PUW31_21820 CP118128.1 Protein Homology CDS 4505121 4507259 . - 0 ID=cds-WJH08650.1;Parent=gene-PUW31_21820;Dbxref=NCBI_GP:WJH08650.1;Name=WJH08650.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463313.1;locus_tag=PUW31_21820;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WJH08650.1;transl_table=11 CP118128.1 Genbank pseudogene 4507668 4509316 . - . ID=gene-PUW31_21825;Name=treC;gbkey=Gene;gene=treC;gene_biotype=pseudogene;locus_tag=PUW31_21825;pseudo=true CP118128.1 Protein Homology CDS 4507668 4509316 . - 0 ID=cds-PUW31_21825;Parent=gene-PUW31_21825;Note=frameshifted;Ontology_term=GO:0005991,GO:0008788;gbkey=CDS;gene=treC;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463314.1;locus_tag=PUW31_21825;product=alpha%2Calpha-phosphotrehalase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4509366 4510784 . - . ID=gene-PUW31_21830;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=PUW31_21830 CP118128.1 Protein Homology CDS 4509366 4510784 . - 0 ID=cds-WJH08651.1;Parent=gene-PUW31_21830;Dbxref=NCBI_GP:WJH08651.1;Name=WJH08651.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224799.1;locus_tag=PUW31_21830;product=PTS trehalose transporter subunit IIBC;protein_id=WJH08651.1;transl_table=11 CP118128.1 Genbank gene 4510922 4511869 . - . ID=gene-PUW31_21835;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=PUW31_21835 CP118128.1 Protein Homology CDS 4510922 4511869 . - 0 ID=cds-WJH08652.1;Parent=gene-PUW31_21835;Dbxref=NCBI_GP:WJH08652.1;Name=WJH08652.1;Ontology_term=GO:0005975,GO:0006355,GO:0003700;gbkey=CDS;gene=treR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=carbohydrate metabolic process|0005975||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463315.1;locus_tag=PUW31_21835;product=trehalose operon repressor TreR;protein_id=WJH08652.1;transl_table=11 CP118128.1 Genbank gene 4512253 4514961 . + . ID=gene-PUW31_21840;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=PUW31_21840 CP118128.1 Protein Homology CDS 4512253 4514961 . + 0 ID=cds-WJH10808.1;Parent=gene-PUW31_21840;Dbxref=NCBI_GP:WJH10808.1;Name=WJH10808.1;Ontology_term=GO:0015693,GO:0015444;gbkey=CDS;gene=mgtA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463316.1;locus_tag=PUW31_21840;product=magnesium-translocating P-type ATPase;protein_id=WJH10808.1;transl_table=11 CP118128.1 Genbank pseudogene 4515077 4515523 . - . ID=gene-PUW31_21845;Name=PUW31_21845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_21845;pseudo=true CP118128.1 Protein Homology CDS 4515077 4515523 . - 0 ID=cds-PUW31_21845;Parent=gene-PUW31_21845;Note=internal stop;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463317.1;locus_tag=PUW31_21845;product=transposase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4515598 4515984 . - . ID=gene-PUW31_21850;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=PUW31_21850 CP118128.1 Protein Homology CDS 4515598 4515984 . - 0 ID=cds-WJH08653.1;Parent=gene-PUW31_21850;Dbxref=NCBI_GP:WJH08653.1;Name=WJH08653.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463318.1;locus_tag=PUW31_21850;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WJH08653.1;transl_table=11 CP118128.1 Genbank gene 4516061 4516522 . - . ID=gene-PUW31_21855;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=PUW31_21855 CP118128.1 Protein Homology CDS 4516061 4516522 . - 0 ID=cds-WJH08654.1;Parent=gene-PUW31_21855;Dbxref=NCBI_GP:WJH08654.1;Name=WJH08654.1;Ontology_term=GO:0009220,GO:0004070;gbkey=CDS;gene=pyrI;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=PUW31_21855;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WJH08654.1;transl_table=11 CP118128.1 Genbank gene 4516535 4517470 . - . ID=gene-PUW31_21860;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=PUW31_21860 CP118128.1 Protein Homology CDS 4516535 4517470 . - 0 ID=cds-WJH08655.1;Parent=gene-PUW31_21860;Dbxref=NCBI_GP:WJH08655.1;Name=WJH08655.1;Ontology_term=GO:0009220,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463320.1;locus_tag=PUW31_21860;product=aspartate carbamoyltransferase;protein_id=WJH08655.1;transl_table=11 CP118128.1 Genbank gene 4517473 4517598 . - . ID=gene-PUW31_21865;Name=PUW31_21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21865 CP118128.1 Protein Homology CDS 4517473 4517598 . - 0 ID=cds-WJH08656.1;Parent=gene-PUW31_21865;Dbxref=NCBI_GP:WJH08656.1;Name=WJH08656.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF007587.0;locus_tag=PUW31_21865;product=hypothetical protein;protein_id=WJH08656.1;transl_table=11 CP118128.1 Genbank pseudogene 4517586 4517727 . + . ID=gene-PUW31_21870;Name=PUW31_21870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_21870;pseudo=true CP118128.1 Protein Homology CDS 4517586 4517727 . + 0 ID=cds-PUW31_21870;Parent=gene-PUW31_21870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453732.1;locus_tag=PUW31_21870;product=hypothetical protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4517697 4518185 . - . ID=gene-PUW31_21875;Name=PUW31_21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21875 CP118128.1 Protein Homology CDS 4517697 4518185 . - 0 ID=cds-WJH08657.1;Parent=gene-PUW31_21875;Dbxref=NCBI_GP:WJH08657.1;Name=WJH08657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463323.1;locus_tag=PUW31_21875;product=arginine repressor;protein_id=WJH08657.1;transl_table=11 CP118128.1 Genbank gene 4518372 4519775 . - . ID=gene-PUW31_21880;Name=PUW31_21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21880 CP118128.1 Protein Homology CDS 4518372 4519775 . - 0 ID=cds-WJH08658.1;Parent=gene-PUW31_21880;Dbxref=NCBI_GP:WJH08658.1;Name=WJH08658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463324.1;locus_tag=PUW31_21880;product=YfcC family protein;protein_id=WJH08658.1;transl_table=11 CP118128.1 Genbank gene 4519831 4520835 . - . ID=gene-PUW31_21885;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=PUW31_21885 CP118128.1 Protein Homology CDS 4519831 4520835 . - 0 ID=cds-WJH08659.1;Parent=gene-PUW31_21885;Dbxref=NCBI_GP:WJH08659.1;Name=WJH08659.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463325.1;locus_tag=PUW31_21885;product=ornithine carbamoyltransferase;protein_id=WJH08659.1;transl_table=11 CP118128.1 Genbank pseudogene 4520947 4521878 . - . ID=gene-PUW31_21890;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=pseudogene;locus_tag=PUW31_21890;pseudo=true CP118128.1 Protein Homology CDS 4520947 4521878 . - 0 ID=cds-PUW31_21890;Parent=gene-PUW31_21890;Note=frameshifted;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463326.1;locus_tag=PUW31_21890;product=carbamate kinase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 4521889 4523109 . - . ID=gene-PUW31_21895;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=pseudogene;locus_tag=PUW31_21895;pseudo=true CP118128.1 Protein Homology CDS 4521889 4523109 . - 0 ID=cds-PUW31_21895;Parent=gene-PUW31_21895;Note=internal stop;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463327.1;locus_tag=PUW31_21895;product=arginine deiminase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4523768 4524220 . + . ID=gene-PUW31_21900;Name=PUW31_21900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21900 CP118128.1 Protein Homology CDS 4523768 4524220 . + 0 ID=cds-WJH08660.1;Parent=gene-PUW31_21900;Dbxref=NCBI_GP:WJH08660.1;Name=WJH08660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463328.1;locus_tag=PUW31_21900;product=YhcH/YjgK/YiaL family protein;protein_id=WJH08660.1;transl_table=11 CP118128.1 Genbank gene 4524294 4525298 . - . ID=gene-PUW31_21905;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=PUW31_21905 CP118128.1 Protein Homology CDS 4524294 4525298 . - 0 ID=cds-WJH08661.1;Parent=gene-PUW31_21905;Dbxref=NCBI_GP:WJH08661.1;Name=WJH08661.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463329.1;locus_tag=PUW31_21905;product=ornithine carbamoyltransferase;protein_id=WJH08661.1;transl_table=11 CP118128.1 Genbank gene 4525464 4525880 . + . ID=gene-PUW31_21910;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=PUW31_21910 CP118128.1 Protein Homology CDS 4525464 4525880 . + 0 ID=cds-WJH08662.1;Parent=gene-PUW31_21910;Dbxref=NCBI_GP:WJH08662.1;Name=WJH08662.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463330.1;locus_tag=PUW31_21910;product=ribonuclease E inhibitor RraB;protein_id=WJH08662.1;transl_table=11 CP118128.1 Genbank gene 4525892 4526704 . + . ID=gene-PUW31_21915;Name=miaE;gbkey=Gene;gene=miaE;gene_biotype=protein_coding;locus_tag=PUW31_21915 CP118128.1 Protein Homology CDS 4525892 4526704 . + 0 ID=cds-WJH08663.1;Parent=gene-PUW31_21915;Dbxref=NCBI_GP:WJH08663.1;Name=WJH08663.1;gbkey=CDS;gene=miaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463331.1;locus_tag=PUW31_21915;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;protein_id=WJH08663.1;transl_table=11 CP118128.1 Genbank gene 4526938 4527426 . - . ID=gene-PUW31_21920;Name=PUW31_21920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21920 CP118128.1 Protein Homology CDS 4526938 4527426 . - 0 ID=cds-WJH08664.1;Parent=gene-PUW31_21920;Dbxref=NCBI_GP:WJH08664.1;Name=WJH08664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463332.1;locus_tag=PUW31_21920;product=DUF3617 domain-containing protein;protein_id=WJH08664.1;transl_table=11 CP118128.1 Genbank gene 4527533 4528036 . - . ID=gene-PUW31_21925;Name=PUW31_21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21925 CP118128.1 Protein Homology CDS 4527533 4528036 . - 0 ID=cds-WJH08665.1;Parent=gene-PUW31_21925;Dbxref=NCBI_GP:WJH08665.1;Name=WJH08665.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463333.1;locus_tag=PUW31_21925;product=GNAT family N-acetyltransferase;protein_id=WJH08665.1;transl_table=11 CP118128.1 Genbank gene 4528231 4529418 . + . ID=gene-PUW31_21930;Name=PUW31_21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21930 CP118128.1 Protein Homology CDS 4528231 4529418 . + 0 ID=cds-WJH08666.1;Parent=gene-PUW31_21930;Dbxref=NCBI_GP:WJH08666.1;Name=WJH08666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463334.1;locus_tag=PUW31_21930;product=YjgN family protein;protein_id=WJH08666.1;transl_table=11 CP118128.1 Genbank gene 4529560 4532415 . - . ID=gene-PUW31_21935;Name=PUW31_21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21935 CP118128.1 Protein Homology CDS 4529560 4532415 . - 0 ID=cds-WJH08667.1;Parent=gene-PUW31_21935;Dbxref=NCBI_GP:WJH08667.1;Name=WJH08667.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=PUW31_21935;product=valine--tRNA ligase;protein_id=WJH08667.1;transl_table=11 CP118128.1 Genbank gene 4532415 4532858 . - . ID=gene-PUW31_21940;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=PUW31_21940 CP118128.1 Protein Homology CDS 4532415 4532858 . - 0 ID=cds-WJH10809.1;Parent=gene-PUW31_21940;Dbxref=NCBI_GP:WJH10809.1;Name=WJH10809.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=PUW31_21940;product=DNA polymerase III subunit chi;protein_id=WJH10809.1;transl_table=11 CP118128.1 Genbank gene 4532995 4534506 . - . ID=gene-PUW31_21945;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=PUW31_21945 CP118128.1 Protein Homology CDS 4532995 4534506 . - 0 ID=cds-WJH08668.1;Parent=gene-PUW31_21945;Dbxref=NCBI_GP:WJH08668.1;Name=WJH08668.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463337.1;locus_tag=PUW31_21945;product=leucyl aminopeptidase;protein_id=WJH08668.1;transl_table=11 CP118128.1 Genbank gene 4534731 4534781 . + . ID=gene-PUW31_21950;Name=PUW31_21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21950 CP118128.1 Protein Homology CDS 4534731 4534781 . + 0 ID=cds-WJH10810.1;Parent=gene-PUW31_21950;Dbxref=NCBI_GP:WJH10810.1;Name=WJH10810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=PUW31_21950;product=hypothetical protein;protein_id=WJH10810.1;transl_table=11 CP118128.1 Genbank pseudogene 4534844 4535943 . + . ID=gene-PUW31_21955;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=pseudogene;locus_tag=PUW31_21955;pseudo=true CP118128.1 Protein Homology CDS 4534844 4535943 . + 0 ID=cds-PUW31_21955;Parent=gene-PUW31_21955;Note=frameshifted;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptF;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463339.1;locus_tag=PUW31_21955;product=LPS export ABC transporter permease LptF;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 4535943 4537024 . + . ID=gene-PUW31_21960;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=pseudogene;locus_tag=PUW31_21960;pseudo=true CP118128.1 Protein Homology CDS 4535943 4537024 . + 0 ID=cds-PUW31_21960;Parent=gene-PUW31_21960;Note=frameshifted;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptG;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463340.1;locus_tag=PUW31_21960;product=LPS export ABC transporter permease LptG;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4537230 4538228 . - . ID=gene-PUW31_21965;Name=PUW31_21965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21965 CP118128.1 Protein Homology CDS 4537230 4538228 . - 0 ID=cds-WJH08669.1;Parent=gene-PUW31_21965;Dbxref=NCBI_GP:WJH08669.1;Name=WJH08669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463341.1;locus_tag=PUW31_21965;product=LacI family DNA-binding transcriptional regulator;protein_id=WJH08669.1;transl_table=11 CP118128.1 Genbank pseudogene 4538292 4539610 . - . ID=gene-PUW31_21970;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=pseudogene;locus_tag=PUW31_21970;pseudo=true CP118128.1 Protein Homology CDS 4538292 4539610 . - 0 ID=cds-PUW31_21970;Parent=gene-PUW31_21970;Note=frameshifted;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463342.1;locus_tag=PUW31_21970;product=gnt-II system L-idonate transporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4539672 4540436 . - . ID=gene-PUW31_21975;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=PUW31_21975 CP118128.1 Protein Homology CDS 4539672 4540436 . - 0 ID=cds-WJH08670.1;Parent=gene-PUW31_21975;Dbxref=NCBI_GP:WJH08670.1;Name=WJH08670.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463343.1;locus_tag=PUW31_21975;product=gluconate 5-dehydrogenase;protein_id=WJH08670.1;transl_table=11 CP118128.1 Genbank gene 4540461 4541492 . - . ID=gene-PUW31_21980;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=PUW31_21980 CP118128.1 Protein Homology CDS 4540461 4541492 . - 0 ID=cds-WJH08671.1;Parent=gene-PUW31_21980;Dbxref=NCBI_GP:WJH08671.1;Name=WJH08671.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463344.1;locus_tag=PUW31_21980;product=L-idonate 5-dehydrogenase;protein_id=WJH08671.1;transl_table=11 CP118128.1 Genbank gene 4541709 4542239 . + . ID=gene-PUW31_21985;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=PUW31_21985 CP118128.1 Protein Homology CDS 4541709 4542239 . + 0 ID=cds-WJH08672.1;Parent=gene-PUW31_21985;Dbxref=NCBI_GP:WJH08672.1;Name=WJH08672.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463345.1;locus_tag=PUW31_21985;product=gluconokinase;protein_id=WJH08672.1;transl_table=11 CP118128.1 Genbank gene 4542267 4543286 . - . ID=gene-PUW31_21990;Name=PUW31_21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_21990 CP118128.1 Protein Homology CDS 4542267 4543286 . - 0 ID=cds-WJH08673.1;Parent=gene-PUW31_21990;Dbxref=NCBI_GP:WJH08673.1;Name=WJH08673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463346.1;locus_tag=PUW31_21990;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WJH08673.1;transl_table=11 CP118128.1 Genbank gene 4543509 4543593 . + . ID=gene-PUW31_21995;Name=PUW31_21995;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_21995 CP118128.1 tRNAscan-SE tRNA 4543509 4543593 . + . ID=rna-PUW31_21995;Parent=gene-PUW31_21995;anticodon=(pos:4543543..4543545);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_21995;product=tRNA-Leu CP118128.1 tRNAscan-SE exon 4543509 4543593 . + . ID=exon-PUW31_21995-1;Parent=rna-PUW31_21995;anticodon=(pos:4543543..4543545);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_21995;product=tRNA-Leu CP118128.1 Genbank gene 4544043 4544588 . + . ID=gene-PUW31_22000;Name=PUW31_22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22000 CP118128.1 Protein Homology CDS 4544043 4544588 . + 0 ID=cds-WJH10811.1;Parent=gene-PUW31_22000;Dbxref=NCBI_GP:WJH10811.1;Name=WJH10811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=PUW31_22000;product=helix-turn-helix domain-containing protein;protein_id=WJH10811.1;transl_table=11 CP118128.1 Genbank gene 4544665 4544913 . + . ID=gene-PUW31_22005;Name=PUW31_22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22005 CP118128.1 Protein Homology CDS 4544665 4544913 . + 0 ID=cds-WJH08674.1;Parent=gene-PUW31_22005;Dbxref=NCBI_GP:WJH08674.1;Name=WJH08674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168389.1;locus_tag=PUW31_22005;product=ribbon-helix-helix domain-containing protein;protein_id=WJH08674.1;transl_table=11 CP118128.1 Genbank gene 4545022 4545261 . + . ID=gene-PUW31_22010;Name=PUW31_22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22010 CP118128.1 Protein Homology CDS 4545022 4545261 . + 0 ID=cds-WJH08675.1;Parent=gene-PUW31_22010;Dbxref=NCBI_GP:WJH08675.1;Name=WJH08675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118105.1;locus_tag=PUW31_22010;product=type II toxin-antitoxin system CcdA family antitoxin;protein_id=WJH08675.1;transl_table=11 CP118128.1 Genbank gene 4545264 4545572 . + . ID=gene-PUW31_22015;Name=PUW31_22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22015 CP118128.1 Protein Homology CDS 4545264 4545572 . + 0 ID=cds-WJH08676.1;Parent=gene-PUW31_22015;Dbxref=NCBI_GP:WJH08676.1;Name=WJH08676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199743.1;locus_tag=PUW31_22015;product=CcdB family protein;protein_id=WJH08676.1;transl_table=11 CP118128.1 Genbank pseudogene 4545978 4546118 . + . ID=gene-PUW31_22020;Name=PUW31_22020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_22020;pseudo=true CP118128.1 Protein Homology CDS 4545978 4546118 . + 0 ID=cds-PUW31_22020;Parent=gene-PUW31_22020;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008322911.1;locus_tag=PUW31_22020;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 4546150 4547283 . - . ID=gene-PUW31_22025;Name=PUW31_22025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_22025;pseudo=true CP118128.1 Protein Homology CDS 4546150 4547283 . - 0 ID=cds-PUW31_22025;Parent=gene-PUW31_22025;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=PUW31_22025;product=IS3 family transposase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4547638 4548135 . + . ID=gene-PUW31_22030;Name=sefA;gbkey=Gene;gene=sefA;gene_biotype=protein_coding;locus_tag=PUW31_22030 CP118128.1 Protein Homology CDS 4547638 4548135 . + 0 ID=cds-WJH08677.1;Parent=gene-PUW31_22030;Dbxref=NCBI_GP:WJH08677.1;Name=WJH08677.1;gbkey=CDS;gene=sefA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001674837.1;locus_tag=PUW31_22030;product=SEF14 fimbria major subunit SefA;protein_id=WJH08677.1;transl_table=11 CP118128.1 Genbank gene 4548257 4548997 . + . ID=gene-PUW31_22035;Name=sefB;gbkey=Gene;gene=sefB;gene_biotype=protein_coding;locus_tag=PUW31_22035 CP118128.1 Protein Homology CDS 4548257 4548997 . + 0 ID=cds-WJH08678.1;Parent=gene-PUW31_22035;Dbxref=NCBI_GP:WJH08678.1;Name=WJH08678.1;gbkey=CDS;gene=sefB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746655.1;locus_tag=PUW31_22035;product=SEF14/SEF18 fimbria chaperone SefB;protein_id=WJH08678.1;transl_table=11 CP118128.1 Genbank pseudogene 4549014 4551112 . + . ID=gene-PUW31_22040;Name=PUW31_22040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_22040;pseudo=true CP118128.1 Protein Homology CDS 4549014 4551112 . + 0 ID=cds-PUW31_22040;Parent=gene-PUW31_22040;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: protein motif:HMM:NF025320.2;locus_tag=PUW31_22040;product=fimbria/pilus outer membrane usher protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4551188 4551415 . + . ID=gene-PUW31_22045;Name=PUW31_22045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22045 CP118128.1 Protein Homology CDS 4551188 4551415 . + 0 ID=cds-WJH08679.1;Parent=gene-PUW31_22045;Dbxref=NCBI_GP:WJH08679.1;Name=WJH08679.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025319.2;locus_tag=PUW31_22045;product=FimD/PapC C-terminal domain-containing protein;protein_id=WJH08679.1;transl_table=11 CP118128.1 Genbank gene 4551455 4551670 . + . ID=gene-PUW31_22050;Name=PUW31_22050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22050 CP118128.1 GeneMarkS-2+ CDS 4551455 4551670 . + 0 ID=cds-WJH08680.1;Parent=gene-PUW31_22050;Dbxref=NCBI_GP:WJH08680.1;Name=WJH08680.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_22050;product=hypothetical protein;protein_id=WJH08680.1;transl_table=11 CP118128.1 Genbank gene 4551703 4551900 . + . ID=gene-PUW31_22055;Name=afaD;gbkey=Gene;gene=afaD;gene_biotype=protein_coding;locus_tag=PUW31_22055 CP118128.1 Protein Homology CDS 4551703 4551900 . + 0 ID=cds-WJH10812.1;Parent=gene-PUW31_22055;Dbxref=NCBI_GP:WJH10812.1;Name=WJH10812.1;gbkey=CDS;gene=afaD;inference=COORDINATES: protein motif:HMM:NF017581.2;locus_tag=PUW31_22055;product=AfaD family invasin;protein_id=WJH10812.1;transl_table=11 CP118128.1 Genbank gene 4551934 4552749 . - . ID=gene-PUW31_22060;Name=PUW31_22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22060 CP118128.1 Protein Homology CDS 4551934 4552749 . - 0 ID=cds-WJH08681.1;Parent=gene-PUW31_22060;Dbxref=NCBI_GP:WJH08681.1;Name=WJH08681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001723051.1;locus_tag=PUW31_22060;product=helix-turn-helix transcriptional regulator;protein_id=WJH08681.1;transl_table=11 CP118128.1 Genbank gene 4553326 4553535 . + . ID=gene-PUW31_22065;Name=pefI;gbkey=Gene;gene=pefI;gene_biotype=protein_coding;locus_tag=PUW31_22065 CP118128.1 Protein Homology CDS 4553326 4553535 . + 0 ID=cds-WJH08682.1;Parent=gene-PUW31_22065;Dbxref=NCBI_GP:WJH08682.1;Name=WJH08682.1;gbkey=CDS;gene=pefI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490505.1;locus_tag=PUW31_22065;product=transcriptional regulator PefI;protein_id=WJH08682.1;transl_table=11 CP118128.1 Genbank gene 4553520 4553870 . + . ID=gene-PUW31_22070;Name=PUW31_22070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22070 CP118128.1 Protein Homology CDS 4553520 4553870 . + 0 ID=cds-WJH08683.1;Parent=gene-PUW31_22070;Dbxref=NCBI_GP:WJH08683.1;Name=WJH08683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490504.1;locus_tag=PUW31_22070;product=helix-turn-helix transcriptional regulator;protein_id=WJH08683.1;transl_table=11 CP118128.1 Genbank gene 4554115 4554768 . + . ID=gene-PUW31_22075;Name=PUW31_22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22075 CP118128.1 Protein Homology CDS 4554115 4554768 . + 0 ID=cds-WJH08684.1;Parent=gene-PUW31_22075;Dbxref=NCBI_GP:WJH08684.1;Name=WJH08684.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490503.1;locus_tag=PUW31_22075;product=DsbA family protein;protein_id=WJH08684.1;transl_table=11 CP118128.1 Genbank gene 4554758 4554904 . + . ID=gene-PUW31_22080;Name=PUW31_22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22080 CP118128.1 Protein Homology CDS 4554758 4554904 . + 0 ID=cds-WJH08685.1;Parent=gene-PUW31_22080;Dbxref=NCBI_GP:WJH08685.1;Name=WJH08685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001141719.1;locus_tag=PUW31_22080;product=hypothetical protein;protein_id=WJH08685.1;transl_table=11 CP118128.1 Genbank gene 4554955 4555800 . + . ID=gene-PUW31_22085;Name=PUW31_22085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22085 CP118128.1 Protein Homology CDS 4554955 4555800 . + 0 ID=cds-WJH08686.1;Parent=gene-PUW31_22085;Dbxref=NCBI_GP:WJH08686.1;Name=WJH08686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526839.1;locus_tag=PUW31_22085;product=YjiK family protein;protein_id=WJH08686.1;transl_table=11 CP118128.1 Genbank pseudogene 4556063 4557173 . + . ID=gene-PUW31_22090;Name=PUW31_22090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_22090;pseudo=true CP118128.1 Protein Homology CDS 4556063 4557173 . + 0 ID=cds-PUW31_22090;Parent=gene-PUW31_22090;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543393.1;locus_tag=PUW31_22090;product=IS3 family transposase;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 4557429 4558304 . + . ID=gene-PUW31_22095;Name=PUW31_22095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_22095;pseudo=true CP118128.1 Protein Homology CDS 4557429 4558304 . + 0 ID=cds-PUW31_22095;Parent=gene-PUW31_22095;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465694.1;locus_tag=PUW31_22095;product=HNH endonuclease;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4558784 4559500 . - . ID=gene-PUW31_22100;Name=PUW31_22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22100 CP118128.1 Protein Homology CDS 4558784 4559500 . - 0 ID=cds-WJH08687.1;Parent=gene-PUW31_22100;Dbxref=NCBI_GP:WJH08687.1;Name=WJH08687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416490.1;locus_tag=PUW31_22100;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WJH08687.1;transl_table=11 CP118128.1 Genbank gene 4560060 4561691 . - . ID=gene-PUW31_22105;Name=PUW31_22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22105 CP118128.1 Protein Homology CDS 4560060 4561691 . - 0 ID=cds-WJH08688.1;Parent=gene-PUW31_22105;Dbxref=NCBI_GP:WJH08688.1;Name=WJH08688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463359.1;locus_tag=PUW31_22105;product=class I SAM-dependent methyltransferase;protein_id=WJH08688.1;transl_table=11 CP118128.1 Genbank gene 4561696 4561953 . - . ID=gene-PUW31_22110;Name=PUW31_22110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22110 CP118128.1 Protein Homology CDS 4561696 4561953 . - 0 ID=cds-WJH08689.1;Parent=gene-PUW31_22110;Dbxref=NCBI_GP:WJH08689.1;Name=WJH08689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463360.1;locus_tag=PUW31_22110;product=YjhX family toxin;protein_id=WJH08689.1;transl_table=11 CP118128.1 Genbank gene 4562441 4563049 . + . ID=gene-PUW31_22115;Name=PUW31_22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22115 CP118128.1 Protein Homology CDS 4562441 4563049 . + 0 ID=cds-WJH08690.1;Parent=gene-PUW31_22115;Dbxref=NCBI_GP:WJH08690.1;Name=WJH08690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463361.1;locus_tag=PUW31_22115;product=DUF1062 domain-containing protein;protein_id=WJH08690.1;transl_table=11 CP118128.1 Genbank pseudogene 4563401 4564287 . + . ID=gene-PUW31_22120;Name=PUW31_22120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_22120;pseudo=true CP118128.1 Protein Homology CDS 4563401 4564287 . + 0 ID=cds-PUW31_22120;Parent=gene-PUW31_22120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463363.1;locus_tag=PUW31_22120;product=hypothetical protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4564534 4564953 . + . ID=gene-PUW31_22125;Name=PUW31_22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22125 CP118128.1 Protein Homology CDS 4564534 4564953 . + 0 ID=cds-WJH08691.1;Parent=gene-PUW31_22125;Dbxref=NCBI_GP:WJH08691.1;Name=WJH08691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463364.1;locus_tag=PUW31_22125;product=DUF302 domain-containing protein;protein_id=WJH08691.1;transl_table=11 CP118128.1 Genbank gene 4564970 4565635 . - . ID=gene-PUW31_22130;Name=PUW31_22130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22130 CP118128.1 Protein Homology CDS 4564970 4565635 . - 0 ID=cds-WJH08692.1;Parent=gene-PUW31_22130;Dbxref=NCBI_GP:WJH08692.1;Name=WJH08692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000588696.1;locus_tag=PUW31_22130;product=dienelactone hydrolase family protein;protein_id=WJH08692.1;transl_table=11 CP118128.1 Genbank gene 4565985 4566758 . + . ID=gene-PUW31_22135;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=PUW31_22135 CP118128.1 Protein Homology CDS 4565985 4566758 . + 0 ID=cds-WJH08693.1;Parent=gene-PUW31_22135;Dbxref=NCBI_GP:WJH08693.1;Name=WJH08693.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463366.1;locus_tag=PUW31_22135;product=Uxu operon transcriptional regulator;protein_id=WJH08693.1;transl_table=11 CP118128.1 Genbank gene 4566759 4567772 . - . ID=gene-PUW31_22140;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=PUW31_22140 CP118128.1 Protein Homology CDS 4566759 4567772 . - 0 ID=cds-WJH08694.1;Parent=gene-PUW31_22140;Dbxref=NCBI_GP:WJH08694.1;Name=WJH08694.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463367.1;locus_tag=PUW31_22140;product=tryptophan--tRNA ligase;protein_id=WJH08694.1;transl_table=11 CP118128.1 Genbank gene 4568485 4569015 . + . ID=gene-PUW31_22145;Name=PUW31_22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22145 CP118128.1 Protein Homology CDS 4568485 4569015 . + 0 ID=cds-WJH08695.1;Parent=gene-PUW31_22145;Dbxref=NCBI_GP:WJH08695.1;Name=WJH08695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463368.3;locus_tag=PUW31_22145;product=Hcp family type VI secretion system effector;protein_id=WJH08695.1;transl_table=11 CP118128.1 Genbank pseudogene 4569254 4569989 . + . ID=gene-PUW31_22150;Name=PUW31_22150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_22150;pseudo=true CP118128.1 Protein Homology CDS 4569254 4569989 . + 0 ID=cds-PUW31_22150;Parent=gene-PUW31_22150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463369.1;locus_tag=PUW31_22150;product=aspartate/glutamate racemase family protein;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4569995 4570903 . - . ID=gene-PUW31_22155;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=PUW31_22155 CP118128.1 Protein Homology CDS 4569995 4570903 . - 0 ID=cds-WJH08696.1;Parent=gene-PUW31_22155;Dbxref=NCBI_GP:WJH08696.1;Name=WJH08696.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463370.1;locus_tag=PUW31_22155;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WJH08696.1;transl_table=11 CP118128.1 Genbank gene 4571022 4572194 . - . ID=gene-PUW31_22160;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=PUW31_22160 CP118128.1 Protein Homology CDS 4571022 4572194 . - 0 ID=cds-WJH08697.1;Parent=gene-PUW31_22160;Dbxref=NCBI_GP:WJH08697.1;Name=WJH08697.1;Ontology_term=GO:0006508,GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463371.1;locus_tag=PUW31_22160;product=beta-aspartyl-peptidase;protein_id=WJH08697.1;transl_table=11 CP118128.1 Genbank gene 4572207 4572668 . - . ID=gene-PUW31_22165;Name=PUW31_22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22165 CP118128.1 Protein Homology CDS 4572207 4572668 . - 0 ID=cds-WJH08698.1;Parent=gene-PUW31_22165;Dbxref=NCBI_GP:WJH08698.1;Name=WJH08698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463372.1;locus_tag=PUW31_22165;product=YjiG family protein;protein_id=WJH08698.1;transl_table=11 CP118128.1 Genbank gene 4572665 4573336 . - . ID=gene-PUW31_22170;Name=PUW31_22170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22170 CP118128.1 Protein Homology CDS 4572665 4573336 . - 0 ID=cds-WJH08699.1;Parent=gene-PUW31_22170;Dbxref=NCBI_GP:WJH08699.1;Name=WJH08699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000068748.1;locus_tag=PUW31_22170;product=nucleoside recognition domain-containing protein;protein_id=WJH08699.1;transl_table=11 CP118128.1 Genbank pseudogene 4574209 4575392 . - . ID=gene-PUW31_22175;Name=PUW31_22175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_22175;pseudo=true CP118128.1 Protein Homology CDS 4574209 4575392 . - 0 ID=cds-PUW31_22175;Parent=gene-PUW31_22175;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463374.1;locus_tag=PUW31_22175;product=MFS transporter;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4575612 4576883 . - . ID=gene-PUW31_22180;Name=PUW31_22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22180 CP118128.1 Protein Homology CDS 4575612 4576883 . - 0 ID=cds-WJH08700.1;Parent=gene-PUW31_22180;Dbxref=NCBI_GP:WJH08700.1;Name=WJH08700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463375.1;locus_tag=PUW31_22180;product=DUF445 domain-containing protein;protein_id=WJH08700.1;transl_table=11 CP118128.1 Genbank gene 4576970 4578211 . - . ID=gene-PUW31_22185;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=PUW31_22185 CP118128.1 Protein Homology CDS 4576970 4578211 . - 0 ID=cds-WJH08701.1;Parent=gene-PUW31_22185;Dbxref=NCBI_GP:WJH08701.1;Name=WJH08701.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463376.1;locus_tag=PUW31_22185;product=multidrug efflux MFS transporter MdtM;protein_id=WJH08701.1;transl_table=11 CP118128.1 Genbank gene 4578690 4579643 . + . ID=gene-PUW31_22190;Name=PUW31_22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22190 CP118128.1 Protein Homology CDS 4578690 4579643 . + 0 ID=cds-WJH08702.1;Parent=gene-PUW31_22190;Dbxref=NCBI_GP:WJH08702.1;Name=WJH08702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548938.1;locus_tag=PUW31_22190;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WJH08702.1;transl_table=11 CP118128.1 Genbank pseudogene 4579824 4580267 . + . ID=gene-PUW31_22195;Name=PUW31_22195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_22195;pseudo=true CP118128.1 Protein Homology CDS 4579824 4580267 . + 0 ID=cds-PUW31_22195;Parent=gene-PUW31_22195;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463378.1;locus_tag=PUW31_22195;product=aldehyde dehydrogenase family protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 4580226 4581467 . - . ID=gene-PUW31_22200;Name=PUW31_22200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_22200;pseudo=true CP118128.1 Protein Homology CDS 4580226 4581467 . - 0 ID=cds-PUW31_22200;Parent=gene-PUW31_22200;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006304,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015461652.1;locus_tag=PUW31_22200;product=type I restriction endonuclease;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4581562 4582866 . - . ID=gene-PUW31_22205;Name=PUW31_22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22205 CP118128.1 Protein Homology CDS 4581562 4582866 . - 0 ID=cds-WJH08703.1;Parent=gene-PUW31_22205;Dbxref=NCBI_GP:WJH08703.1;Name=WJH08703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000863532.1;locus_tag=PUW31_22205;product=type I restriction-modification protein specificity subunit;protein_id=WJH08703.1;transl_table=11 CP118128.1 Genbank gene 4582856 4584475 . - . ID=gene-PUW31_22210;Name=PUW31_22210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22210 CP118128.1 Protein Homology CDS 4582856 4584475 . - 0 ID=cds-WJH08704.1;Parent=gene-PUW31_22210;Dbxref=NCBI_GP:WJH08704.1;Name=WJH08704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238256.1;locus_tag=PUW31_22210;product=class I SAM-dependent DNA methyltransferase;protein_id=WJH08704.1;transl_table=11 CP118128.1 Genbank pseudogene 4584539 4585705 . - . ID=gene-PUW31_22215;Name=PUW31_22215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_22215;pseudo=true CP118128.1 Protein Homology CDS 4584539 4585705 . - 0 ID=cds-PUW31_22215;Parent=gene-PUW31_22215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000800831.1;locus_tag=PUW31_22215;product=restriction endonuclease;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4585830 4585964 . + . ID=gene-PUW31_22220;Name=PUW31_22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22220 CP118128.1 Protein Homology CDS 4585830 4585964 . + 0 ID=cds-WJH08705.1;Parent=gene-PUW31_22220;Dbxref=NCBI_GP:WJH08705.1;Name=WJH08705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001055725.1;locus_tag=PUW31_22220;product=hypothetical protein;protein_id=WJH08705.1;transl_table=11 CP118128.1 Genbank gene 4585996 4586823 . - . ID=gene-PUW31_22225;Name=PUW31_22225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22225 CP118128.1 Protein Homology CDS 4585996 4586823 . - 0 ID=cds-WJH08706.1;Parent=gene-PUW31_22225;Dbxref=NCBI_GP:WJH08706.1;Name=WJH08706.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000526846.1;locus_tag=PUW31_22225;product=N-6 DNA methylase;protein_id=WJH08706.1;transl_table=11 CP118128.1 Genbank gene 4587253 4587828 . - . ID=gene-PUW31_22230;Name=PUW31_22230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22230 CP118128.1 Protein Homology CDS 4587253 4587828 . - 0 ID=cds-WJH10813.1;Parent=gene-PUW31_22230;Dbxref=NCBI_GP:WJH10813.1;Name=WJH10813.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539933.1;locus_tag=PUW31_22230;product=restriction endonuclease subunit S;protein_id=WJH10813.1;transl_table=11 CP118128.1 Genbank gene 4588441 4590282 . - . ID=gene-PUW31_22235;Name=PUW31_22235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22235 CP118128.1 Protein Homology CDS 4588441 4590282 . - 0 ID=cds-WJH08707.1;Parent=gene-PUW31_22235;Dbxref=NCBI_GP:WJH08707.1;Name=WJH08707.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000974638.1;locus_tag=PUW31_22235;product=3'-5' exonuclease;protein_id=WJH08707.1;transl_table=11 CP118128.1 Genbank gene 4590685 4590972 . + . ID=gene-PUW31_22240;Name=PUW31_22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22240 CP118128.1 Protein Homology CDS 4590685 4590972 . + 0 ID=cds-WJH08708.1;Parent=gene-PUW31_22240;Dbxref=NCBI_GP:WJH08708.1;Name=WJH08708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463387.1;locus_tag=PUW31_22240;product=BrnT family toxin;protein_id=WJH08708.1;transl_table=11 CP118128.1 Genbank gene 4590959 4591261 . + . ID=gene-PUW31_22245;Name=PUW31_22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22245 CP118128.1 Protein Homology CDS 4590959 4591261 . + 0 ID=cds-WJH08709.1;Parent=gene-PUW31_22245;Dbxref=NCBI_GP:WJH08709.1;Name=WJH08709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463388.1;locus_tag=PUW31_22245;product=BrnA antitoxin family protein;protein_id=WJH08709.1;transl_table=11 CP118128.1 Genbank gene 4591336 4592292 . - . ID=gene-PUW31_22250;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=PUW31_22250 CP118128.1 Protein Homology CDS 4591336 4592292 . - 0 ID=cds-WJH08710.1;Parent=gene-PUW31_22250;Dbxref=NCBI_GP:WJH08710.1;Name=WJH08710.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463389.1;locus_tag=PUW31_22250;product=GTPase;protein_id=WJH08710.1;transl_table=11 CP118128.1 Genbank gene 4592303 4592506 . - . ID=gene-PUW31_22255;Name=PUW31_22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22255 CP118128.1 Protein Homology CDS 4592303 4592506 . - 0 ID=cds-WJH08711.1;Parent=gene-PUW31_22255;Dbxref=NCBI_GP:WJH08711.1;Name=WJH08711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463390.1;locus_tag=PUW31_22255;product=YbdD/YjiX family protein;protein_id=WJH08711.1;transl_table=11 CP118128.1 Genbank gene 4592601 4594751 . - . ID=gene-PUW31_22260;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=PUW31_22260 CP118128.1 Protein Homology CDS 4592601 4594751 . - 0 ID=cds-WJH08712.1;Parent=gene-PUW31_22260;Dbxref=NCBI_GP:WJH08712.1;Name=WJH08712.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463391.1;locus_tag=PUW31_22260;product=pyruvate/proton symporter BtsT;protein_id=WJH08712.1;transl_table=11 CP118128.1 Genbank gene 4595118 4596779 . + . ID=gene-PUW31_22265;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=PUW31_22265 CP118128.1 Protein Homology CDS 4595118 4596779 . + 0 ID=cds-WJH08713.1;Parent=gene-PUW31_22265;Dbxref=NCBI_GP:WJH08713.1;Name=WJH08713.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463392.1;locus_tag=PUW31_22265;product=methyl-accepting chemotaxis protein;protein_id=WJH08713.1;transl_table=11 CP118128.1 Genbank gene 4597102 4599867 . + . ID=gene-PUW31_22270;Name=PUW31_22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22270 CP118128.1 Protein Homology CDS 4597102 4599867 . + 0 ID=cds-WJH08714.1;Parent=gene-PUW31_22270;Dbxref=NCBI_GP:WJH08714.1;Name=WJH08714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463393.1;locus_tag=PUW31_22270;product=sigma-54-dependent transcriptional regulator;protein_id=WJH08714.1;transl_table=11 CP118128.1 Genbank gene 4599969 4600391 . + . ID=gene-PUW31_22275;Name=PUW31_22275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22275 CP118128.1 Protein Homology CDS 4599969 4600391 . + 0 ID=cds-WJH08715.1;Parent=gene-PUW31_22275;Dbxref=NCBI_GP:WJH08715.1;Name=WJH08715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463394.1;locus_tag=PUW31_22275;product=PTS sugar transporter subunit IIA;protein_id=WJH08715.1;transl_table=11 CP118128.1 Genbank gene 4600406 4600867 . + . ID=gene-PUW31_22280;Name=PUW31_22280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22280 CP118128.1 Protein Homology CDS 4600406 4600867 . + 0 ID=cds-WJH08716.1;Parent=gene-PUW31_22280;Dbxref=NCBI_GP:WJH08716.1;Name=WJH08716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463395.1;locus_tag=PUW31_22280;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WJH08716.1;transl_table=11 CP118128.1 Genbank gene 4600893 4601672 . + . ID=gene-PUW31_22285;Name=PUW31_22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22285 CP118128.1 Protein Homology CDS 4600893 4601672 . + 0 ID=cds-WJH08717.1;Parent=gene-PUW31_22285;Dbxref=NCBI_GP:WJH08717.1;Name=WJH08717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463396.1;locus_tag=PUW31_22285;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WJH08717.1;transl_table=11 CP118128.1 Genbank gene 4601650 4602498 . + . ID=gene-PUW31_22290;Name=PUW31_22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22290 CP118128.1 Protein Homology CDS 4601650 4602498 . + 0 ID=cds-WJH08718.1;Parent=gene-PUW31_22290;Dbxref=NCBI_GP:WJH08718.1;Name=WJH08718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224959.1;locus_tag=PUW31_22290;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WJH08718.1;transl_table=11 CP118128.1 Genbank gene 4602511 4603569 . + . ID=gene-PUW31_22295;Name=PUW31_22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22295 CP118128.1 Protein Homology CDS 4602511 4603569 . + 0 ID=cds-WJH08719.1;Parent=gene-PUW31_22295;Dbxref=NCBI_GP:WJH08719.1;Name=WJH08719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463398.1;locus_tag=PUW31_22295;product=SIS domain-containing protein;protein_id=WJH08719.1;transl_table=11 CP118128.1 Genbank gene 4603587 4604597 . + . ID=gene-PUW31_22300;Name=PUW31_22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22300 CP118128.1 Protein Homology CDS 4603587 4604597 . + 0 ID=cds-WJH08720.1;Parent=gene-PUW31_22300;Dbxref=NCBI_GP:WJH08720.1;Name=WJH08720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224961.1;locus_tag=PUW31_22300;product=SIS domain-containing protein;protein_id=WJH08720.1;transl_table=11 CP118128.1 Genbank pseudogene 4604731 4607021 . - . ID=gene-PUW31_22305;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=pseudogene;locus_tag=PUW31_22305;pseudo=true CP118128.1 Protein Homology CDS 4604731 4607021 . - 0 ID=cds-PUW31_22305;Parent=gene-PUW31_22305;Note=frameshifted;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465680.1;locus_tag=PUW31_22305;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4607304 4607765 . - . ID=gene-PUW31_22310;Name=PUW31_22310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22310 CP118128.1 Protein Homology CDS 4607304 4607765 . - 0 ID=cds-WJH08721.1;Parent=gene-PUW31_22310;Dbxref=NCBI_GP:WJH08721.1;Name=WJH08721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463401.1;locus_tag=PUW31_22310;product=DUF2501 domain-containing protein;protein_id=WJH08721.1;transl_table=11 CP118128.1 Genbank gene 4607823 4608560 . - . ID=gene-PUW31_22315;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=PUW31_22315 CP118128.1 Protein Homology CDS 4607823 4608560 . - 0 ID=cds-WJH08722.1;Parent=gene-PUW31_22315;Dbxref=NCBI_GP:WJH08722.1;Name=WJH08722.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463402.1;locus_tag=PUW31_22315;product=DNA replication protein DnaC;protein_id=WJH08722.1;transl_table=11 CP118128.1 Genbank gene 4608563 4609102 . - . ID=gene-PUW31_22320;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=PUW31_22320 CP118128.1 Protein Homology CDS 4608563 4609102 . - 0 ID=cds-WJH08723.1;Parent=gene-PUW31_22320;Dbxref=NCBI_GP:WJH08723.1;Name=WJH08723.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463403.1;locus_tag=PUW31_22320;product=primosomal protein DnaT;protein_id=WJH08723.1;transl_table=11 CP118128.1 Genbank gene 4609195 4609668 . - . ID=gene-PUW31_22325;Name=PUW31_22325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22325 CP118128.1 Protein Homology CDS 4609195 4609668 . - 0 ID=cds-WJH08724.1;Parent=gene-PUW31_22325;Dbxref=NCBI_GP:WJH08724.1;Name=WJH08724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463404.1;locus_tag=PUW31_22325;product=threonine/serine exporter;protein_id=WJH08724.1;transl_table=11 CP118128.1 Genbank gene 4609659 4610435 . - . ID=gene-PUW31_22330;Name=PUW31_22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22330 CP118128.1 Protein Homology CDS 4609659 4610435 . - 0 ID=cds-WJH08725.1;Parent=gene-PUW31_22330;Dbxref=NCBI_GP:WJH08725.1;Name=WJH08725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=PUW31_22330;product=threonine/serine exporter ThrE family protein;protein_id=WJH08725.1;transl_table=11 CP118128.1 Genbank gene 4611148 4611873 . + . ID=gene-PUW31_22335;Name=PUW31_22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22335 CP118128.1 Protein Homology CDS 4611148 4611873 . + 0 ID=cds-WJH08726.1;Parent=gene-PUW31_22335;Dbxref=NCBI_GP:WJH08726.1;Name=WJH08726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463406.1;locus_tag=PUW31_22335;product=response regulator transcription factor;protein_id=WJH08726.1;transl_table=11 CP118128.1 Genbank gene 4611834 4612508 . + . ID=gene-PUW31_22340;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=PUW31_22340 CP118128.1 Protein Homology CDS 4611834 4612508 . + 0 ID=cds-WJH08727.1;Parent=gene-PUW31_22340;Dbxref=NCBI_GP:WJH08727.1;Name=WJH08727.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463407.3;locus_tag=PUW31_22340;product=DNA-binding transcriptional activator BglJ;protein_id=WJH08727.1;transl_table=11 CP118128.1 Genbank gene 4612559 4613017 . - . ID=gene-PUW31_22345;Name=PUW31_22345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22345 CP118128.1 Protein Homology CDS 4612559 4613017 . - 0 ID=cds-WJH08728.1;Parent=gene-PUW31_22345;Dbxref=NCBI_GP:WJH08728.1;Name=WJH08728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463408.1;locus_tag=PUW31_22345;product=YbaK/EbsC family protein;protein_id=WJH08728.1;transl_table=11 CP118128.1 Genbank gene 4613176 4613964 . - . ID=gene-PUW31_22350;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=PUW31_22350 CP118128.1 Protein Homology CDS 4613176 4613964 . - 0 ID=cds-WJH08729.1;Parent=gene-PUW31_22350;Dbxref=NCBI_GP:WJH08729.1;Name=WJH08729.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463409.1;locus_tag=PUW31_22350;product=siderophore-iron reductase FhuF;protein_id=WJH08729.1;transl_table=11 CP118128.1 Genbank gene 4614085 4615149 . - . ID=gene-PUW31_22355;Name=PUW31_22355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22355 CP118128.1 Protein Homology CDS 4614085 4615149 . - 0 ID=cds-WJH08730.1;Parent=gene-PUW31_22355;Dbxref=NCBI_GP:WJH08730.1;Name=WJH08730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463410.1;locus_tag=PUW31_22355;product=GGDEF domain-containing protein;protein_id=WJH08730.1;transl_table=11 CP118128.1 Genbank gene 4615400 4615636 . + . ID=gene-PUW31_22360;Name=PUW31_22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22360 CP118128.1 Protein Homology CDS 4615400 4615636 . + 0 ID=cds-WJH08731.1;Parent=gene-PUW31_22360;Dbxref=NCBI_GP:WJH08731.1;Name=WJH08731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463411.1;locus_tag=PUW31_22360;product=DUF1435 domain-containing protein;protein_id=WJH08731.1;transl_table=11 CP118128.1 Genbank gene 4615668 4615754 . - . ID=gene-PUW31_22365;Name=PUW31_22365;gbkey=Gene;gene_biotype=tRNA;locus_tag=PUW31_22365 CP118128.1 tRNAscan-SE tRNA 4615668 4615754 . - . ID=rna-PUW31_22365;Parent=gene-PUW31_22365;anticodon=(pos:complement(4615718..4615720));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_22365;product=tRNA-Leu CP118128.1 tRNAscan-SE exon 4615668 4615754 . - . ID=exon-PUW31_22365-1;Parent=rna-PUW31_22365;anticodon=(pos:complement(4615718..4615720));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PUW31_22365;product=tRNA-Leu CP118128.1 Genbank gene 4615945 4616973 . - . ID=gene-PUW31_22370;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=PUW31_22370 CP118128.1 Protein Homology CDS 4615945 4616973 . - 0 ID=cds-WJH08732.1;Parent=gene-PUW31_22370;Dbxref=NCBI_GP:WJH08732.1;Name=WJH08732.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463412.1;locus_tag=PUW31_22370;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WJH08732.1;transl_table=11 CP118128.1 Genbank gene 4617076 4617513 . + . ID=gene-PUW31_22375;Name=PUW31_22375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22375 CP118128.1 Protein Homology CDS 4617076 4617513 . + 0 ID=cds-WJH08733.1;Parent=gene-PUW31_22375;Dbxref=NCBI_GP:WJH08733.1;Name=WJH08733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463413.1;locus_tag=PUW31_22375;product=DNA polymerase III subunit psi;protein_id=WJH08733.1;transl_table=11 CP118128.1 Genbank gene 4617458 4617904 . + . ID=gene-PUW31_22380;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=PUW31_22380 CP118128.1 Protein Homology CDS 4617458 4617904 . + 0 ID=cds-WJH08734.1;Parent=gene-PUW31_22380;Dbxref=NCBI_GP:WJH08734.1;Name=WJH08734.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463414.1;locus_tag=PUW31_22380;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WJH08734.1;transl_table=11 CP118128.1 Genbank gene 4617926 4618603 . + . ID=gene-PUW31_22385;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=PUW31_22385 CP118128.1 Protein Homology CDS 4617926 4618603 . + 0 ID=cds-WJH10814.1;Parent=gene-PUW31_22385;Dbxref=NCBI_GP:WJH10814.1;Name=WJH10814.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=PUW31_22385;product=pyrimidine 5'-nucleotidase;protein_id=WJH10814.1;transl_table=11 CP118128.1 Genbank gene 4618695 4620284 . + . ID=gene-PUW31_22390;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=PUW31_22390 CP118128.1 Protein Homology CDS 4618695 4620284 . + 0 ID=cds-WJH08735.1;Parent=gene-PUW31_22390;Dbxref=NCBI_GP:WJH08735.1;Name=WJH08735.1;Ontology_term=GO:0006415,GO:0003747,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=PUW31_22390;product=peptide chain release factor 3;protein_id=WJH08735.1;transl_table=11 CP118128.1 Genbank gene 4620686 4621303 . + . ID=gene-PUW31_22395;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=PUW31_22395 CP118128.1 Protein Homology CDS 4620686 4621303 . + 0 ID=cds-WJH08736.1;Parent=gene-PUW31_22395;Dbxref=NCBI_GP:WJH08736.1;Name=WJH08736.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463417.1;locus_tag=PUW31_22395;product=molecular chaperone OsmY;protein_id=WJH08736.1;transl_table=11 CP118128.1 Genbank gene 4621432 4621593 . + . ID=gene-PUW31_22400;Name=PUW31_22400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22400 CP118128.1 Protein Homology CDS 4621432 4621593 . + 0 ID=cds-WJH08737.1;Parent=gene-PUW31_22400;Dbxref=NCBI_GP:WJH08737.1;Name=WJH08737.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=PUW31_22400;product=DUF1328 domain-containing protein;protein_id=WJH08737.1;transl_table=11 CP118128.1 Genbank gene 4621717 4622790 . + . ID=gene-PUW31_22405;Name=PUW31_22405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22405 CP118128.1 Protein Homology CDS 4621717 4622790 . + 0 ID=cds-WJH10815.1;Parent=gene-PUW31_22405;Dbxref=NCBI_GP:WJH10815.1;Name=WJH10815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463419.1;locus_tag=PUW31_22405;product=patatin family protein;protein_id=WJH10815.1;transl_table=11 CP118128.1 Genbank gene 4622787 4623560 . + . ID=gene-PUW31_22410;Name=PUW31_22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22410 CP118128.1 Protein Homology CDS 4622787 4623560 . + 0 ID=cds-WJH08738.1;Parent=gene-PUW31_22410;Dbxref=NCBI_GP:WJH08738.1;Name=WJH08738.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463420.1;locus_tag=PUW31_22410;product=metal-dependent hydrolase;protein_id=WJH08738.1;transl_table=11 CP118128.1 Genbank gene 4623593 4624456 . - . ID=gene-PUW31_22415;Name=PUW31_22415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22415 CP118128.1 Protein Homology CDS 4623593 4624456 . - 0 ID=cds-WJH08739.1;Parent=gene-PUW31_22415;Dbxref=NCBI_GP:WJH08739.1;Name=WJH08739.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463421.1;locus_tag=PUW31_22415;product=YjjW family glycine radical enzyme activase;protein_id=WJH08739.1;transl_table=11 CP118128.1 Genbank gene 4624428 4625978 . - . ID=gene-PUW31_22420;Name=PUW31_22420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22420 CP118128.1 Protein Homology CDS 4624428 4625978 . - 0 ID=cds-WJH08740.1;Parent=gene-PUW31_22420;Dbxref=NCBI_GP:WJH08740.1;Name=WJH08740.1;Ontology_term=GO:0008150,GO:0003824,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=catalytic activity|0003824||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463422.1;locus_tag=PUW31_22420;product=YjjI family glycine radical enzyme;protein_id=WJH08740.1;transl_table=11 CP118128.1 Genbank gene 4626238 4627017 . + . ID=gene-PUW31_22425;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=PUW31_22425 CP118128.1 Protein Homology CDS 4626238 4627017 . + 0 ID=cds-WJH08741.1;Parent=gene-PUW31_22425;Dbxref=NCBI_GP:WJH08741.1;Name=WJH08741.1;Ontology_term=GO:0009264,GO:0004139;gbkey=CDS;gene=deoC;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=PUW31_22425;product=deoxyribose-phosphate aldolase;protein_id=WJH08741.1;transl_table=11 CP118128.1 Genbank gene 4627141 4628463 . + . ID=gene-PUW31_22430;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=PUW31_22430 CP118128.1 Protein Homology CDS 4627141 4628463 . + 0 ID=cds-WJH08742.1;Parent=gene-PUW31_22430;Dbxref=NCBI_GP:WJH08742.1;Name=WJH08742.1;Ontology_term=GO:0006139,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=PUW31_22430;product=thymidine phosphorylase;protein_id=WJH08742.1;transl_table=11 CP118128.1 Genbank gene 4628515 4629738 . + . ID=gene-PUW31_22435;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=PUW31_22435 CP118128.1 Protein Homology CDS 4628515 4629738 . + 0 ID=cds-WJH08743.1;Parent=gene-PUW31_22435;Dbxref=NCBI_GP:WJH08743.1;Name=WJH08743.1;Ontology_term=GO:0006139,GO:0008973;gbkey=CDS;gene=deoB;go_function=phosphopentomutase activity|0008973||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463425.1;locus_tag=PUW31_22435;product=phosphopentomutase;protein_id=WJH08743.1;transl_table=11 CP118128.1 Genbank gene 4629948 4630667 . + . ID=gene-PUW31_22440;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=PUW31_22440 CP118128.1 Protein Homology CDS 4629948 4630667 . + 0 ID=cds-WJH08744.1;Parent=gene-PUW31_22440;Dbxref=NCBI_GP:WJH08744.1;Name=WJH08744.1;Ontology_term=GO:0043096,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=purine nucleobase salvage|0043096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463426.1;locus_tag=PUW31_22440;product=purine-nucleoside phosphorylase;protein_id=WJH08744.1;transl_table=11 CP118128.1 Genbank pseudogene 4630846 4632167 . + . ID=gene-PUW31_22445;Name=yjjJ;gbkey=Gene;gene=yjjJ;gene_biotype=pseudogene;locus_tag=PUW31_22445;pseudo=true CP118128.1 Protein Homology CDS 4630846 4632167 . + 0 ID=cds-PUW31_22445;Parent=gene-PUW31_22445;Note=frameshifted;gbkey=CDS;gene=yjjJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747246.1;locus_tag=PUW31_22445;product=type II toxin-antitoxin system HipA family toxin YjjJ;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4632172 4633188 . - . ID=gene-PUW31_22450;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=PUW31_22450 CP118128.1 Protein Homology CDS 4632172 4633188 . - 0 ID=cds-WJH08745.1;Parent=gene-PUW31_22450;Dbxref=NCBI_GP:WJH08745.1;Name=WJH08745.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463432.1;locus_tag=PUW31_22450;product=lipoate--protein ligase LplA;protein_id=WJH08745.1;transl_table=11 CP118128.1 Genbank gene 4633222 4633866 . - . ID=gene-PUW31_22455;Name=PUW31_22455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22455 CP118128.1 Protein Homology CDS 4633222 4633866 . - 0 ID=cds-WJH08746.1;Parent=gene-PUW31_22455;Dbxref=NCBI_GP:WJH08746.1;Name=WJH08746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463433.2;locus_tag=PUW31_22455;product=YtjB family periplasmic protein;protein_id=WJH08746.1;transl_table=11 CP118128.1 Genbank gene 4633983 4634951 . + . ID=gene-PUW31_22460;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=PUW31_22460 CP118128.1 Protein Homology CDS 4633983 4634951 . + 0 ID=cds-WJH08747.1;Parent=gene-PUW31_22460;Dbxref=NCBI_GP:WJH08747.1;Name=WJH08747.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463434.1;locus_tag=PUW31_22460;product=phosphoserine phosphatase;protein_id=WJH08747.1;transl_table=11 CP118128.1 Genbank gene 4635035 4636417 . + . ID=gene-PUW31_22465;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=PUW31_22465 CP118128.1 Protein Homology CDS 4635035 4636417 . + 0 ID=cds-WJH08748.1;Parent=gene-PUW31_22465;Dbxref=NCBI_GP:WJH08748.1;Name=WJH08748.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=PUW31_22465;product=DNA repair protein RadA;protein_id=WJH08748.1;transl_table=11 CP118128.1 Genbank pseudogene 4636568 4637799 . + . ID=gene-PUW31_22470;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=pseudogene;locus_tag=PUW31_22470;pseudo=true CP118128.1 Protein Homology CDS 4636568 4637799 . + 0 ID=cds-PUW31_22470;Parent=gene-PUW31_22470;Note=frameshifted;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463436.5;locus_tag=PUW31_22470;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4637917 4639584 . - . ID=gene-PUW31_22475;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=PUW31_22475 CP118128.1 Protein Homology CDS 4637917 4639584 . - 0 ID=cds-WJH08749.1;Parent=gene-PUW31_22475;Dbxref=NCBI_GP:WJH08749.1;Name=WJH08749.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=PUW31_22475;product=energy-dependent translational throttle protein EttA;protein_id=WJH08749.1;transl_table=11 CP118128.1 Genbank gene 4639793 4641730 . + . ID=gene-PUW31_22480;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=PUW31_22480 CP118128.1 Protein Homology CDS 4639793 4641730 . + 0 ID=cds-WJH08750.1;Parent=gene-PUW31_22480;Dbxref=NCBI_GP:WJH08750.1;Name=WJH08750.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418809.4;locus_tag=PUW31_22480;product=murein transglycosylase;protein_id=WJH08750.1;transl_table=11 CP118128.1 Genbank gene 4641788 4642114 . + . ID=gene-PUW31_22485;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=PUW31_22485 CP118128.1 Protein Homology CDS 4641788 4642114 . + 0 ID=cds-WJH08751.1;Parent=gene-PUW31_22485;Dbxref=NCBI_GP:WJH08751.1;Name=WJH08751.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463439.1;locus_tag=PUW31_22485;product=trp operon repressor;protein_id=WJH08751.1;transl_table=11 CP118128.1 Genbank gene 4642216 4642731 . - . ID=gene-PUW31_22490;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=PUW31_22490 CP118128.1 Protein Homology CDS 4642216 4642731 . - 0 ID=cds-WJH08752.1;Parent=gene-PUW31_22490;Dbxref=NCBI_GP:WJH08752.1;Name=WJH08752.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463440.1;locus_tag=PUW31_22490;product=inosine/xanthosine triphosphatase;protein_id=WJH08752.1;transl_table=11 CP118128.1 Genbank gene 4642780 4643427 . + . ID=gene-PUW31_22495;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=PUW31_22495 CP118128.1 Protein Homology CDS 4642780 4643427 . + 0 ID=cds-WJH08753.1;Parent=gene-PUW31_22495;Dbxref=NCBI_GP:WJH08753.1;Name=WJH08753.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463441.1;locus_tag=PUW31_22495;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WJH08753.1;transl_table=11 CP118128.1 Genbank gene 4643424 4644293 . - . ID=gene-PUW31_22500;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=PUW31_22500 CP118128.1 Protein Homology CDS 4643424 4644293 . - 0 ID=cds-WJH08754.1;Parent=gene-PUW31_22500;Dbxref=NCBI_GP:WJH08754.1;Name=WJH08754.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463442.1;locus_tag=PUW31_22500;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WJH08754.1;transl_table=11 CP118128.1 Genbank gene 4644505 4644978 . + . ID=gene-PUW31_22505;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=PUW31_22505 CP118128.1 Protein Homology CDS 4644505 4644978 . + 0 ID=cds-WJH08755.1;Parent=gene-PUW31_22505;Dbxref=NCBI_GP:WJH08755.1;Name=WJH08755.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463443.1;locus_tag=PUW31_22505;product=protein CreA;protein_id=WJH08755.1;transl_table=11 CP118128.1 Genbank gene 4644991 4645680 . + . ID=gene-PUW31_22510;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=PUW31_22510 CP118128.1 Protein Homology CDS 4644991 4645680 . + 0 ID=cds-WJH10816.1;Parent=gene-PUW31_22510;Dbxref=NCBI_GP:WJH10816.1;Name=WJH10816.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463444.1;locus_tag=PUW31_22510;product=two-component system response regulator CreB;protein_id=WJH10816.1;transl_table=11 CP118128.1 Genbank gene 4645680 4647104 . + . ID=gene-PUW31_22515;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=PUW31_22515 CP118128.1 Protein Homology CDS 4645680 4647104 . + 0 ID=cds-WJH08756.1;Parent=gene-PUW31_22515;Dbxref=NCBI_GP:WJH08756.1;Name=WJH08756.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463445.1;locus_tag=PUW31_22515;product=two-component system sensor histidine kinase CreC;protein_id=WJH08756.1;transl_table=11 CP118128.1 Genbank gene 4647162 4648511 . + . ID=gene-PUW31_22520;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=PUW31_22520 CP118128.1 Protein Homology CDS 4647162 4648511 . + 0 ID=cds-WJH08757.1;Parent=gene-PUW31_22520;Dbxref=NCBI_GP:WJH08757.1;Name=WJH08757.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463446.1;locus_tag=PUW31_22520;product=cell envelope integrity protein CreD;protein_id=WJH08757.1;transl_table=11 CP118128.1 Genbank pseudogene 4648569 4649616 . - . ID=gene-PUW31_22525;Name=sthE;gbkey=Gene;gene=sthE;gene_biotype=pseudogene;locus_tag=PUW31_22525;pseudo=true CP118128.1 Protein Homology CDS 4648569 4649616 . - 0 ID=cds-PUW31_22525;Parent=gene-PUW31_22525;Note=frameshifted;gbkey=CDS;gene=sthE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463447.1;locus_tag=PUW31_22525;product=fimbrial major subunit SthE;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4649657 4650214 . - . ID=gene-PUW31_22530;Name=PUW31_22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22530 CP118128.1 Protein Homology CDS 4649657 4650214 . - 0 ID=cds-WJH08758.1;Parent=gene-PUW31_22530;Dbxref=NCBI_GP:WJH08758.1;Name=WJH08758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463448.1;locus_tag=PUW31_22530;product=fimbrial protein;protein_id=WJH08758.1;transl_table=11 CP118128.1 Genbank pseudogene 4650232 4652768 . - . ID=gene-PUW31_22535;Name=PUW31_22535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_22535;pseudo=true CP118128.1 Protein Homology CDS 4650232 4652768 . - 0 ID=cds-PUW31_22535;Parent=gene-PUW31_22535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463449.1;locus_tag=PUW31_22535;product=fimbrial outer membrane usher protein;pseudo=true;transl_table=11 CP118128.1 Genbank pseudogene 4652814 4653497 . - . ID=gene-PUW31_22540;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=pseudogene;locus_tag=PUW31_22540;pseudo=true CP118128.1 Protein Homology CDS 4652814 4653497 . - 0 ID=cds-PUW31_22540;Parent=gene-PUW31_22540;Note=internal stop;gbkey=CDS;gene=sthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463450.1;locus_tag=PUW31_22540;product=fimbrial biogenesis chaperone SthA;pseudo=true;transl_table=11 CP118128.1 Genbank gene 4653568 4654113 . - . ID=gene-PUW31_22545;Name=PUW31_22545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22545 CP118128.1 Protein Homology CDS 4653568 4654113 . - 0 ID=cds-WJH08759.1;Parent=gene-PUW31_22545;Dbxref=NCBI_GP:WJH08759.1;Name=WJH08759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463451.1;locus_tag=PUW31_22545;product=fimbrial protein;protein_id=WJH08759.1;transl_table=11 CP118128.1 Genbank gene 4654452 4655123 . - . ID=gene-PUW31_22550;Name=PUW31_22550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22550 CP118128.1 Protein Homology CDS 4654452 4655123 . - 0 ID=cds-WJH08760.1;Parent=gene-PUW31_22550;Dbxref=NCBI_GP:WJH08760.1;Name=WJH08760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463452.1;locus_tag=PUW31_22550;product=helix-turn-helix domain-containing protein;protein_id=WJH08760.1;transl_table=11 CP118128.1 Genbank gene 4655508 4655822 . - . ID=gene-PUW31_22555;Name=PUW31_22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22555 CP118128.1 Protein Homology CDS 4655508 4655822 . - 0 ID=cds-WJH08761.1;Parent=gene-PUW31_22555;Dbxref=NCBI_GP:WJH08761.1;Name=WJH08761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463453.1;locus_tag=PUW31_22555;product=hypothetical protein;protein_id=WJH08761.1;transl_table=11 CP118128.1 Genbank gene 4656089 4656805 . - . ID=gene-PUW31_22560;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=PUW31_22560 CP118128.1 Protein Homology CDS 4656089 4656805 . - 0 ID=cds-WJH08762.1;Parent=gene-PUW31_22560;Dbxref=NCBI_GP:WJH08762.1;Name=WJH08762.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=PUW31_22560;product=two-component system response regulator ArcA;protein_id=WJH08762.1;transl_table=11 CP118128.1 Genbank gene 4656901 4657041 . + . ID=gene-PUW31_22565;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=PUW31_22565 CP118128.1 Protein Homology CDS 4656901 4657041 . + 0 ID=cds-WJH08763.1;Parent=gene-PUW31_22565;Dbxref=NCBI_GP:WJH08763.1;Name=WJH08763.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463455.1;locus_tag=PUW31_22565;product=protein YjjY;protein_id=WJH08763.1;transl_table=11 CP118128.1 Genbank gene 4657441 4658127 . + . ID=gene-PUW31_22570;Name=PUW31_22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22570 CP118128.1 Protein Homology CDS 4657441 4658127 . + 0 ID=cds-WJH08764.1;Parent=gene-PUW31_22570;Dbxref=NCBI_GP:WJH08764.1;Name=WJH08764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463456.1;locus_tag=PUW31_22570;product=tRNA/rRNA methyltransferase;protein_id=WJH08764.1;transl_table=11 ##sequence-region CP118129.1 1 88336 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=594 CP118129.1 Genbank region 1 88336 . + . ID=CP118129.1:1..88336;Dbxref=taxon:594;Is_circular=true;Name=unnamed;collection-date=2017-08-21;country=South Africa: North West;gbkey=Src;genome=plasmid;mol_type=genomic DNA;nat-host=Gallus gallus domesticus;plasmid-name=unnamed;serovar=Gallinarum;strain=ZA_445509;sub-species=enterica CP118129.1 Genbank gene 154 834 . - . ID=gene-PUW31_22580;Name=PUW31_22580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22580 CP118129.1 Protein Homology CDS 154 834 . - 0 ID=cds-WJH10863.1;Parent=gene-PUW31_22580;Dbxref=NCBI_GP:WJH10863.1;Name=WJH10863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490548.1;locus_tag=PUW31_22580;product=DNA methylase;protein_id=WJH10863.1;transl_table=11 CP118129.1 Genbank gene 997 1278 . + . ID=gene-PUW31_22585;Name=PUW31_22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22585 CP118129.1 Protein Homology CDS 997 1278 . + 0 ID=cds-WJH10864.1;Parent=gene-PUW31_22585;Dbxref=NCBI_GP:WJH10864.1;Name=WJH10864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134757.1;locus_tag=PUW31_22585;product=hypothetical protein;protein_id=WJH10864.1;transl_table=11 CP118129.1 Genbank gene 1216 1572 . - . ID=gene-PUW31_22590;Name=PUW31_22590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22590 CP118129.1 Protein Homology CDS 1216 1572 . - 0 ID=cds-WJH10865.1;Parent=gene-PUW31_22590;Dbxref=NCBI_GP:WJH10865.1;Name=WJH10865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490547.1;locus_tag=PUW31_22590;product=hypothetical protein;protein_id=WJH10865.1;transl_table=11 CP118129.1 Genbank gene 1565 2035 . - . ID=gene-PUW31_22595;Name=PUW31_22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22595 CP118129.1 Protein Homology CDS 1565 2035 . - 0 ID=cds-WJH10866.1;Parent=gene-PUW31_22595;Dbxref=NCBI_GP:WJH10866.1;Name=WJH10866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490546.1;locus_tag=PUW31_22595;product=hypothetical protein;protein_id=WJH10866.1;transl_table=11 CP118129.1 Genbank gene 2546 2968 . + . ID=gene-PUW31_22600;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=PUW31_22600 CP118129.1 Protein Homology CDS 2546 2968 . + 0 ID=cds-WJH10867.1;Parent=gene-PUW31_22600;Dbxref=NCBI_GP:WJH10867.1;Name=WJH10867.1;Ontology_term=GO:0003677;gbkey=CDS;gene=umuD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490545.1;locus_tag=PUW31_22600;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WJH10867.1;transl_table=11 CP118129.1 Genbank pseudogene 2968 4242 . + . ID=gene-PUW31_22605;Name=PUW31_22605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_22605;pseudo=true CP118129.1 Protein Homology CDS 2968 4242 . + 0 ID=cds-PUW31_22605;Parent=gene-PUW31_22605;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490544.1;locus_tag=PUW31_22605;product=Y-family DNA polymerase;pseudo=true;transl_table=11 CP118129.1 Genbank gene 4324 5298 . - . ID=gene-PUW31_22610;Name=PUW31_22610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22610 CP118129.1 Protein Homology CDS 4324 5298 . - 0 ID=cds-WJH10868.1;Parent=gene-PUW31_22610;Dbxref=NCBI_GP:WJH10868.1;Name=WJH10868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229774.1;locus_tag=PUW31_22610;product=ParB family protein;protein_id=WJH10868.1;transl_table=11 CP118129.1 Genbank gene 5298 6503 . - . ID=gene-PUW31_22615;Name=PUW31_22615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22615 CP118129.1 Protein Homology CDS 5298 6503 . - 0 ID=cds-WJH10869.1;Parent=gene-PUW31_22615;Dbxref=NCBI_GP:WJH10869.1;Name=WJH10869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490542.1;locus_tag=PUW31_22615;product=AAA family ATPase;protein_id=WJH10869.1;transl_table=11 CP118129.1 Genbank gene 6918 7859 . + . ID=gene-PUW31_22620;Name=PUW31_22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22620 CP118129.1 Protein Homology CDS 6918 7859 . + 0 ID=cds-WJH10870.1;Parent=gene-PUW31_22620;Dbxref=NCBI_GP:WJH10870.1;Name=WJH10870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490541.1;locus_tag=PUW31_22620;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WJH10870.1;transl_table=11 CP118129.1 Genbank pseudogene 7856 8457 . - . ID=gene-PUW31_22625;Name=PUW31_22625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_22625;pseudo=true CP118129.1 Protein Homology CDS 7856 8457 . - 0 ID=cds-PUW31_22625;Parent=gene-PUW31_22625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008455304.1;locus_tag=PUW31_22625;product=DUF2913 family protein;pseudo=true;transl_table=11 CP118129.1 Genbank gene 8514 8930 . - . ID=gene-PUW31_22630;Name=PUW31_22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22630 CP118129.1 Protein Homology CDS 8514 8930 . - 0 ID=cds-WJH10871.1;Parent=gene-PUW31_22630;Dbxref=NCBI_GP:WJH10871.1;Name=WJH10871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000988947.1;locus_tag=PUW31_22630;product=hypothetical protein;protein_id=WJH10871.1;transl_table=11 CP118129.1 Genbank gene 9033 9449 . - . ID=gene-PUW31_22635;Name=PUW31_22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22635 CP118129.1 Protein Homology CDS 9033 9449 . - 0 ID=cds-WJH10909.1;Parent=gene-PUW31_22635;Dbxref=NCBI_GP:WJH10909.1;Name=WJH10909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490539.1;locus_tag=PUW31_22635;product=hypothetical protein;protein_id=WJH10909.1;transl_table=11 CP118129.1 Genbank pseudogene 9535 10648 . - . ID=gene-PUW31_22640;Name=PUW31_22640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_22640;pseudo=true CP118129.1 Protein Homology CDS 9535 10648 . - 0 ID=cds-PUW31_22640;Parent=gene-PUW31_22640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490538.1;locus_tag=PUW31_22640;product=DNA-binding protein;pseudo=true;transl_table=11 CP118129.1 Genbank gene 10907 11395 . + . ID=gene-PUW31_22645;Name=PUW31_22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22645 CP118129.1 Protein Homology CDS 10907 11395 . + 0 ID=cds-WJH10872.1;Parent=gene-PUW31_22645;Dbxref=NCBI_GP:WJH10872.1;Name=WJH10872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490537.1;locus_tag=PUW31_22645;product=cytoplasmic protein;protein_id=WJH10872.1;transl_table=11 CP118129.1 Genbank gene 12050 12790 . + . ID=gene-PUW31_22650;Name=PUW31_22650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22650 CP118129.1 Protein Homology CDS 12050 12790 . + 0 ID=cds-WJH10873.1;Parent=gene-PUW31_22650;Dbxref=NCBI_GP:WJH10873.1;Name=WJH10873.1;Ontology_term=GO:0004089;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490536.1;locus_tag=PUW31_22650;product=carbonic anhydrase family protein;protein_id=WJH10873.1;transl_table=11 CP118129.1 Genbank gene 12997 13557 . + . ID=gene-PUW31_22655;Name=PUW31_22655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22655 CP118129.1 Protein Homology CDS 12997 13557 . + 0 ID=cds-WJH10874.1;Parent=gene-PUW31_22655;Dbxref=NCBI_GP:WJH10874.1;Name=WJH10874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490535.1;locus_tag=PUW31_22655;product=recombinase family protein;protein_id=WJH10874.1;transl_table=11 CP118129.1 Genbank gene 13541 15205 . + . ID=gene-PUW31_22660;Name=PUW31_22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22660 CP118129.1 Protein Homology CDS 13541 15205 . + 0 ID=cds-WJH10875.1;Parent=gene-PUW31_22660;Dbxref=NCBI_GP:WJH10875.1;Name=WJH10875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490534.1;locus_tag=PUW31_22660;product=IS481 family transposase;protein_id=WJH10875.1;transl_table=11 CP118129.1 Genbank gene 15138 16163 . + . ID=gene-PUW31_22665;Name=PUW31_22665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22665 CP118129.1 Protein Homology CDS 15138 16163 . + 0 ID=cds-WJH10876.1;Parent=gene-PUW31_22665;Dbxref=NCBI_GP:WJH10876.1;Name=WJH10876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490533.1;locus_tag=PUW31_22665;product=ExeA family protein;protein_id=WJH10876.1;transl_table=11 CP118129.1 Genbank gene 16352 17389 . - . ID=gene-PUW31_22670;Name=PUW31_22670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22670 CP118129.1 Protein Homology CDS 16352 17389 . - 0 ID=cds-WJH10877.1;Parent=gene-PUW31_22670;Dbxref=NCBI_GP:WJH10877.1;Name=WJH10877.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490532.1;locus_tag=PUW31_22670;product=IS630 family transposase;protein_id=WJH10877.1;transl_table=11 CP118129.1 Genbank gene 17996 18889 . + . ID=gene-PUW31_22675;Name=spvR;gbkey=Gene;gene=spvR;gene_biotype=protein_coding;locus_tag=PUW31_22675 CP118129.1 Protein Homology CDS 17996 18889 . + 0 ID=cds-WJH10910.1;Parent=gene-PUW31_22675;Dbxref=NCBI_GP:WJH10910.1;Name=WJH10910.1;gbkey=CDS;gene=spvR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490531.1;locus_tag=PUW31_22675;product=virulence genes transcriptional activator SpvR;protein_id=WJH10910.1;transl_table=11 CP118129.1 Genbank gene 19063 19227 . + . ID=gene-PUW31_22680;Name=PUW31_22680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22680 CP118129.1 Protein Homology CDS 19063 19227 . + 0 ID=cds-WJH10878.1;Parent=gene-PUW31_22680;Dbxref=NCBI_GP:WJH10878.1;Name=WJH10878.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576629.1;locus_tag=PUW31_22680;product=glycoside hydrolase family protein;protein_id=WJH10878.1;transl_table=11 CP118129.1 Genbank gene 19401 20168 . + . ID=gene-PUW31_22685;Name=spvA;gbkey=Gene;gene=spvA;gene_biotype=protein_coding;locus_tag=PUW31_22685 CP118129.1 Protein Homology CDS 19401 20168 . + 0 ID=cds-WJH10879.1;Parent=gene-PUW31_22685;Dbxref=NCBI_GP:WJH10879.1;Name=WJH10879.1;gbkey=CDS;gene=spvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490530.1;locus_tag=PUW31_22685;product=virulence protein SpvA;protein_id=WJH10879.1;transl_table=11 CP118129.1 Genbank gene 20131 20298 . + . ID=gene-PUW31_22690;Name=PUW31_22690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22690 CP118129.1 GeneMarkS-2+ CDS 20131 20298 . + 0 ID=cds-WJH10911.1;Parent=gene-PUW31_22690;Dbxref=NCBI_GP:WJH10911.1;Name=WJH10911.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_22690;product=hypothetical protein;protein_id=WJH10911.1;transl_table=11 CP118129.1 Genbank gene 20350 22131 . + . ID=gene-PUW31_22695;Name=spvB;gbkey=Gene;gene=spvB;gene_biotype=protein_coding;locus_tag=PUW31_22695 CP118129.1 Protein Homology CDS 20350 22131 . + 0 ID=cds-WJH10880.1;Parent=gene-PUW31_22695;Dbxref=NCBI_GP:WJH10880.1;Name=WJH10880.1;gbkey=CDS;gene=spvB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490529.1;locus_tag=PUW31_22695;product=SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB;protein_id=WJH10880.1;transl_table=11 CP118129.1 Genbank gene 22412 23137 . + . ID=gene-PUW31_22700;Name=spvC;gbkey=Gene;gene=spvC;gene_biotype=protein_coding;locus_tag=PUW31_22700 CP118129.1 Protein Homology CDS 22412 23137 . + 0 ID=cds-WJH10881.1;Parent=gene-PUW31_22700;Dbxref=NCBI_GP:WJH10881.1;Name=WJH10881.1;gbkey=CDS;gene=spvC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490528.1;locus_tag=PUW31_22700;product=type III secretion system effector phosphothreonine lyase SpvC;protein_id=WJH10881.1;transl_table=11 CP118129.1 Genbank pseudogene 23206 23320 . - . ID=gene-PUW31_22705;Name=PUW31_22705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_22705;pseudo=true CP118129.1 Protein Homology CDS 23206 23320 . - 1 ID=cds-PUW31_22705;Parent=gene-PUW31_22705;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000064873.1;locus_tag=PUW31_22705;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 CP118129.1 Genbank gene 24194 24607 . - . ID=gene-PUW31_22710;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=PUW31_22710 CP118129.1 Protein Homology CDS 24194 24607 . - 0 ID=cds-WJH10882.1;Parent=gene-PUW31_22710;Dbxref=NCBI_GP:WJH10882.1;Name=WJH10882.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000064919.1;locus_tag=PUW31_22710;product=IS200/IS605 family transposase;protein_id=WJH10882.1;transl_table=11 CP118129.1 Genbank gene 24664 25014 . + . ID=gene-PUW31_22715;Name=PUW31_22715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22715 CP118129.1 Protein Homology CDS 24664 25014 . + 0 ID=cds-WJH10883.1;Parent=gene-PUW31_22715;Dbxref=NCBI_GP:WJH10883.1;Name=WJH10883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490525.1;locus_tag=PUW31_22715;product=transposase;protein_id=WJH10883.1;transl_table=11 CP118129.1 Genbank pseudogene 25081 25631 . - . ID=gene-PUW31_22720;Name=PUW31_22720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_22720;pseudo=true CP118129.1 Protein Homology CDS 25081 25631 . - 0 ID=cds-PUW31_22720;Parent=gene-PUW31_22720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490524.1;locus_tag=PUW31_22720;product=inverse autotransporter beta domain-containing protein;pseudo=true;transl_table=11 CP118129.1 Genbank gene 25520 25849 . - . ID=gene-PUW31_22725;Name=PUW31_22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22725 CP118129.1 GeneMarkS-2+ CDS 25520 25849 . - 0 ID=cds-WJH10884.1;Parent=gene-PUW31_22725;Dbxref=NCBI_GP:WJH10884.1;Name=WJH10884.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_22725;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WJH10884.1;transl_table=11 CP118129.1 Genbank pseudogene 26365 26827 . - . ID=gene-PUW31_22730;Name=PUW31_22730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_22730;pseudo=true CP118129.1 Protein Homology CDS 26365 26827 . - 0 ID=cds-PUW31_22730;Parent=gene-PUW31_22730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490523.1;locus_tag=PUW31_22730;product=hypothetical protein;pseudo=true;transl_table=11 CP118129.1 Genbank gene 26821 27309 . - . ID=gene-PUW31_22735;Name=PUW31_22735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22735 CP118129.1 Protein Homology CDS 26821 27309 . - 0 ID=cds-WJH10885.1;Parent=gene-PUW31_22735;Dbxref=NCBI_GP:WJH10885.1;Name=WJH10885.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001075507.1;locus_tag=PUW31_22735;product=CaiF/GrlA family transcriptional regulator;protein_id=WJH10885.1;transl_table=11 CP118129.1 Genbank gene 27496 28047 . - . ID=gene-PUW31_22740;Name=PUW31_22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22740 CP118129.1 Protein Homology CDS 27496 28047 . - 0 ID=cds-WJH10886.1;Parent=gene-PUW31_22740;Dbxref=NCBI_GP:WJH10886.1;Name=WJH10886.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012772.2;locus_tag=PUW31_22740;product=EAL domain-containing protein;protein_id=WJH10886.1;transl_table=11 CP118129.1 Genbank gene 28056 28838 . - . ID=gene-PUW31_22745;Name=PUW31_22745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22745 CP118129.1 Protein Homology CDS 28056 28838 . - 0 ID=cds-WJH10887.1;Parent=gene-PUW31_22745;Dbxref=NCBI_GP:WJH10887.1;Name=WJH10887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490521.1;locus_tag=PUW31_22745;product=site-specific integrase;protein_id=WJH10887.1;transl_table=11 CP118129.1 Genbank gene 28873 29394 . - . ID=gene-PUW31_22750;Name=PUW31_22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22750 CP118129.1 Protein Homology CDS 28873 29394 . - 0 ID=cds-WJH10888.1;Parent=gene-PUW31_22750;Dbxref=NCBI_GP:WJH10888.1;Name=WJH10888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490520.1;locus_tag=PUW31_22750;product=cytoplasmic protein;protein_id=WJH10888.1;transl_table=11 CP118129.1 Genbank gene 29391 29681 . - . ID=gene-PUW31_22755;Name=PUW31_22755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22755 CP118129.1 Protein Homology CDS 29391 29681 . - 0 ID=cds-WJH10889.1;Parent=gene-PUW31_22755;Dbxref=NCBI_GP:WJH10889.1;Name=WJH10889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490519.1;locus_tag=PUW31_22755;product=cytoplasmic protein;protein_id=WJH10889.1;transl_table=11 CP118129.1 Genbank gene 29683 29988 . - . ID=gene-PUW31_22760;Name=ccdB;gbkey=Gene;gene=ccdB;gene_biotype=protein_coding;locus_tag=PUW31_22760 CP118129.1 Protein Homology CDS 29683 29988 . - 0 ID=cds-WJH10890.1;Parent=gene-PUW31_22760;Dbxref=NCBI_GP:WJH10890.1;Name=WJH10890.1;gbkey=CDS;gene=ccdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490518.1;locus_tag=PUW31_22760;product=type II toxin-antitoxin system toxin CcdB;protein_id=WJH10890.1;transl_table=11 CP118129.1 Genbank gene 29990 30208 . - . ID=gene-PUW31_22765;Name=ccdA;gbkey=Gene;gene=ccdA;gene_biotype=protein_coding;locus_tag=PUW31_22765 CP118129.1 Protein Homology CDS 29990 30208 . - 0 ID=cds-WJH10891.1;Parent=gene-PUW31_22765;Dbxref=NCBI_GP:WJH10891.1;Name=WJH10891.1;gbkey=CDS;gene=ccdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490517.1;locus_tag=PUW31_22765;product=type II toxin-antitoxin system antitoxin CcdA;protein_id=WJH10891.1;transl_table=11 CP118129.1 Genbank gene 30952 31182 . + . ID=gene-PUW31_22770;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=PUW31_22770 CP118129.1 Protein Homology CDS 30952 31182 . + 0 ID=cds-WJH10892.1;Parent=gene-PUW31_22770;Dbxref=NCBI_GP:WJH10892.1;Name=WJH10892.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229629.1;locus_tag=PUW31_22770;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WJH10892.1;transl_table=11 CP118129.1 Genbank gene 31179 31607 . + . ID=gene-PUW31_22775;Name=PUW31_22775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22775 CP118129.1 Protein Homology CDS 31179 31607 . + 0 ID=cds-WJH10893.1;Parent=gene-PUW31_22775;Dbxref=NCBI_GP:WJH10893.1;Name=WJH10893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000812999.1;locus_tag=PUW31_22775;product=type II toxin-antitoxin system VapC family toxin;protein_id=WJH10893.1;transl_table=11 CP118129.1 Genbank gene 32177 33025 . - . ID=gene-PUW31_22780;Name=PUW31_22780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22780 CP118129.1 Protein Homology CDS 32177 33025 . - 0 ID=cds-WJH10894.1;Parent=gene-PUW31_22780;Dbxref=NCBI_GP:WJH10894.1;Name=WJH10894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175395.1;locus_tag=PUW31_22780;product=SdiA-regulated domain-containing protein;protein_id=WJH10894.1;transl_table=11 CP118129.1 Genbank gene 33051 33212 . - . ID=gene-PUW31_22785;Name=PUW31_22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22785 CP118129.1 GeneMarkS-2+ CDS 33051 33212 . - 0 ID=cds-WJH10912.1;Parent=gene-PUW31_22785;Dbxref=NCBI_GP:WJH10912.1;Name=WJH10912.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_22785;product=hypothetical protein;protein_id=WJH10912.1;transl_table=11 CP118129.1 Genbank gene 33473 33685 . - . ID=gene-PUW31_22790;Name=PUW31_22790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22790 CP118129.1 Protein Homology CDS 33473 33685 . - 0 ID=cds-WJH10895.1;Parent=gene-PUW31_22790;Dbxref=NCBI_GP:WJH10895.1;Name=WJH10895.1;Ontology_term=GO:0006355,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063796.1;locus_tag=PUW31_22790;product=FaeA/PapI family transcriptional regulator;protein_id=WJH10895.1;transl_table=11 CP118129.1 Genbank gene 33758 34342 . - . ID=gene-PUW31_22795;Name=PUW31_22795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22795 CP118129.1 Protein Homology CDS 33758 34342 . - 0 ID=cds-WJH10896.1;Parent=gene-PUW31_22795;Dbxref=NCBI_GP:WJH10896.1;Name=WJH10896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576642.1;locus_tag=PUW31_22795;product=hypothetical protein;protein_id=WJH10896.1;transl_table=11 CP118129.1 Genbank gene 34622 35179 . - . ID=gene-PUW31_22800;Name=PUW31_22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22800 CP118129.1 GeneMarkS-2+ CDS 34622 35179 . - 0 ID=cds-WJH10897.1;Parent=gene-PUW31_22800;Dbxref=NCBI_GP:WJH10897.1;Name=WJH10897.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_22800;product=fimbrial protein;protein_id=WJH10897.1;transl_table=11 CP118129.1 Genbank gene 35179 35454 . - . ID=gene-PUW31_22805;Name=PUW31_22805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22805 CP118129.1 Protein Homology CDS 35179 35454 . - 0 ID=cds-WJH10898.1;Parent=gene-PUW31_22805;Dbxref=NCBI_GP:WJH10898.1;Name=WJH10898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001020576.1;locus_tag=PUW31_22805;product=hypothetical protein;protein_id=WJH10898.1;transl_table=11 CP118129.1 Genbank gene 35441 36205 . - . ID=gene-PUW31_22810;Name=PUW31_22810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22810 CP118129.1 Protein Homology CDS 35441 36205 . - 0 ID=cds-WJH10899.1;Parent=gene-PUW31_22810;Dbxref=NCBI_GP:WJH10899.1;Name=WJH10899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000827659.1;locus_tag=PUW31_22810;product=fimbrial protein;protein_id=WJH10899.1;transl_table=11 CP118129.1 Genbank gene 36233 37030 . - . ID=gene-PUW31_22815;Name=faeH;gbkey=Gene;gene=faeH;gene_biotype=protein_coding;locus_tag=PUW31_22815 CP118129.1 Protein Homology CDS 36233 37030 . - 0 ID=cds-WJH10900.1;Parent=gene-PUW31_22815;Dbxref=NCBI_GP:WJH10900.1;Name=WJH10900.1;gbkey=CDS;gene=faeH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000704720.1;locus_tag=PUW31_22815;product=F4 (K88) fimbria minor subunit FaeH;protein_id=WJH10900.1;transl_table=11 CP118129.1 Genbank gene 37266 37538 . - . ID=gene-PUW31_22820;Name=PUW31_22820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22820 CP118129.1 GeneMarkS-2+ CDS 37266 37538 . - 0 ID=cds-WJH10901.1;Parent=gene-PUW31_22820;Dbxref=NCBI_GP:WJH10901.1;Name=WJH10901.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_22820;product=hypothetical protein;protein_id=WJH10901.1;transl_table=11 CP118129.1 Genbank gene 38997 39656 . + . ID=gene-PUW31_22825;Name=PUW31_22825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22825 CP118129.1 Protein Homology CDS 38997 39656 . + 0 ID=cds-WJH10902.1;Parent=gene-PUW31_22825;Dbxref=NCBI_GP:WJH10902.1;Name=WJH10902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575507.1;locus_tag=PUW31_22825;product=fimbrial protein;protein_id=WJH10902.1;transl_table=11 CP118129.1 Genbank gene 39808 40539 . + . ID=gene-PUW31_22830;Name=PUW31_22830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22830 CP118129.1 GeneMarkS-2+ CDS 39808 40539 . + 0 ID=cds-WJH10903.1;Parent=gene-PUW31_22830;Dbxref=NCBI_GP:WJH10903.1;Name=WJH10903.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_22830;product=hypothetical protein;protein_id=WJH10903.1;transl_table=11 CP118129.1 Genbank gene 40706 40903 . + . ID=gene-PUW31_22835;Name=PUW31_22835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22835 CP118129.1 Protein Homology CDS 40706 40903 . + 0 ID=cds-WJH10904.1;Parent=gene-PUW31_22835;Dbxref=NCBI_GP:WJH10904.1;Name=WJH10904.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.2;locus_tag=PUW31_22835;product=transposase;protein_id=WJH10904.1;transl_table=11 CP118129.1 Genbank pseudogene 41058 41272 . + . ID=gene-PUW31_22840;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=PUW31_22840;pseudo=true CP118129.1 Protein Homology CDS 41058 41272 . + 0 ID=cds-PUW31_22840;Parent=gene-PUW31_22840;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536669.1;locus_tag=PUW31_22840;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;transl_table=11 CP118129.1 Genbank pseudogene 41264 41668 . + . ID=gene-PUW31_22845;Name=PUW31_22845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_22845;pseudo=true CP118129.1 Protein Homology CDS 41264 41668 . + 0 ID=cds-PUW31_22845;Parent=gene-PUW31_22845;Note=frameshifted%3B internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=PUW31_22845;product=IS66 family transposase zinc-finger binding domain-containing protein;pseudo=true;transl_table=11 CP118129.1 Genbank gene 42462 43343 . - . ID=gene-PUW31_22850;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=PUW31_22850 CP118129.1 Protein Homology CDS 42462 43343 . - 0 ID=cds-WJH10905.1;Parent=gene-PUW31_22850;Dbxref=NCBI_GP:WJH10905.1;Name=WJH10905.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490498.3;locus_tag=PUW31_22850;product=incFII family plasmid replication initiator RepA;protein_id=WJH10905.1;transl_table=11 CP118129.1 Genbank gene 43324 43401 . - . ID=gene-PUW31_22855;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=PUW31_22855 CP118129.1 Protein Homology CDS 43324 43401 . - 0 ID=cds-WJH10907.1;Parent=gene-PUW31_22855;Dbxref=NCBI_GP:WJH10907.1;Name=WJH10907.1;Ontology_term=GO:0006276,GO:0003674;gbkey=CDS;gene=tap;go_function=molecular_function|0003674||IEA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490497.1;locus_tag=PUW31_22855;product=RepA leader peptide Tap;protein_id=WJH10907.1;transl_table=11 CP118129.1 Genbank gene 43649 43915 . - . ID=gene-PUW31_22860;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=PUW31_22860 CP118129.1 Protein Homology CDS 43649 43915 . - 0 ID=cds-WJH10906.1;Parent=gene-PUW31_22860;Dbxref=NCBI_GP:WJH10906.1;Name=WJH10906.1;gbkey=CDS;gene=repA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490495.1;locus_tag=PUW31_22860;product=replication regulatory protein RepA;protein_id=WJH10906.1;transl_table=11 CP118129.1 Genbank pseudogene 44026 44593 . - . ID=gene-PUW31_22865;Name=PUW31_22865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_22865;pseudo=true CP118129.1 Protein Homology CDS 44026 44593 . - 0 ID=cds-PUW31_22865;Parent=gene-PUW31_22865;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001242133.1;locus_tag=PUW31_22865;product=phospholipase D family protein;pseudo=true;transl_table=11 CP118129.1 Genbank pseudogene 44780 44863 . - . ID=gene-PUW31_22870;Name=PUW31_22870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_22870;pseudo=true CP118129.1 Protein Homology CDS 44780 44863 . - 0 ID=cds-PUW31_22870;Parent=gene-PUW31_22870;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490493.1;locus_tag=PUW31_22870;product=hypothetical protein;pseudo=true;transl_table=11 CP118129.1 Genbank gene 44980 45543 . - . ID=gene-PUW31_22875;Name=PUW31_22875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22875 CP118129.1 Protein Homology CDS 44980 45543 . - 0 ID=cds-WJH10822.1;Parent=gene-PUW31_22875;Dbxref=NCBI_GP:WJH10822.1;Name=WJH10822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490594.1;locus_tag=PUW31_22875;product=fertility inhibition protein FinO;protein_id=WJH10822.1;transl_table=11 CP118129.1 Genbank gene 45598 46338 . - . ID=gene-PUW31_22880;Name=traX;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=PUW31_22880 CP118129.1 Protein Homology CDS 45598 46338 . - 0 ID=cds-WJH10823.1;Parent=gene-PUW31_22880;Dbxref=NCBI_GP:WJH10823.1;Name=WJH10823.1;gbkey=CDS;gene=traX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490593.1;locus_tag=PUW31_22880;product=conjugal transfer pilus acetylase TraX;protein_id=WJH10823.1;transl_table=11 CP118129.1 Genbank pseudogene 46358 51615 . - . ID=gene-PUW31_22885;Name=traI;gbkey=Gene;gene=traI;gene_biotype=pseudogene;locus_tag=PUW31_22885;pseudo=true CP118129.1 Protein Homology CDS 46358 51615 . - 0 ID=cds-PUW31_22885;Parent=gene-PUW31_22885;Note=frameshifted;Ontology_term=GO:0003678;gbkey=CDS;gene=traI;go_function=DNA helicase activity|0003678||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490592.1;locus_tag=PUW31_22885;product=conjugative transfer relaxase/helicase TraI;pseudo=true;transl_table=11 CP118129.1 Genbank gene 51615 53867 . - . ID=gene-PUW31_22890;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=PUW31_22890 CP118129.1 Protein Homology CDS 51615 53867 . - 0 ID=cds-WJH10824.1;Parent=gene-PUW31_22890;Dbxref=NCBI_GP:WJH10824.1;Name=WJH10824.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490588.1;locus_tag=PUW31_22890;product=type IV conjugative transfer system coupling protein TraD;protein_id=WJH10824.1;transl_table=11 CP118129.1 Genbank gene 54244 54975 . - . ID=gene-PUW31_22895;Name=PUW31_22895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22895 CP118129.1 Protein Homology CDS 54244 54975 . - 0 ID=cds-WJH10825.1;Parent=gene-PUW31_22895;Dbxref=NCBI_GP:WJH10825.1;Name=WJH10825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490587.1;locus_tag=PUW31_22895;product=complement resistance protein TraT;protein_id=WJH10825.1;transl_table=11 CP118129.1 Genbank gene 55221 55703 . - . ID=gene-PUW31_22900;Name=PUW31_22900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22900 CP118129.1 Protein Homology CDS 55221 55703 . - 0 ID=cds-WJH10826.1;Parent=gene-PUW31_22900;Dbxref=NCBI_GP:WJH10826.1;Name=WJH10826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000787664.1;locus_tag=PUW31_22900;product=surface exclusion protein;protein_id=WJH10826.1;transl_table=11 CP118129.1 Genbank gene 55725 58547 . - . ID=gene-PUW31_22905;Name=traG;gbkey=Gene;gene=traG;gene_biotype=protein_coding;locus_tag=PUW31_22905 CP118129.1 Protein Homology CDS 55725 58547 . - 0 ID=cds-WJH10827.1;Parent=gene-PUW31_22905;Dbxref=NCBI_GP:WJH10827.1;Name=WJH10827.1;gbkey=CDS;gene=traG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001007083.1;locus_tag=PUW31_22905;product=conjugal transfer mating pair stabilization protein TraG;protein_id=WJH10827.1;transl_table=11 CP118129.1 Genbank pseudogene 58544 59927 . - . ID=gene-PUW31_22910;Name=PUW31_22910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_22910;pseudo=true CP118129.1 Protein Homology CDS 58544 59927 . - 0 ID=cds-PUW31_22910;Parent=gene-PUW31_22910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490584.1;locus_tag=PUW31_22910;product=conjugal transfer protein TraH;pseudo=true;transl_table=11 CP118129.1 Genbank gene 59917 60465 . - . ID=gene-PUW31_22915;Name=trbB;gbkey=Gene;gene=trbB;gene_biotype=protein_coding;locus_tag=PUW31_22915 CP118129.1 Protein Homology CDS 59917 60465 . - 0 ID=cds-WJH10828.1;Parent=gene-PUW31_22915;Dbxref=NCBI_GP:WJH10828.1;Name=WJH10828.1;gbkey=CDS;gene=trbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490583.1;locus_tag=PUW31_22915;product=type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB;protein_id=WJH10828.1;transl_table=11 CP118129.1 Genbank gene 60452 60745 . - . ID=gene-PUW31_22920;Name=traQ;gbkey=Gene;gene=traQ;gene_biotype=protein_coding;locus_tag=PUW31_22920 CP118129.1 Protein Homology CDS 60452 60745 . - 0 ID=cds-WJH10829.1;Parent=gene-PUW31_22920;Dbxref=NCBI_GP:WJH10829.1;Name=WJH10829.1;gbkey=CDS;gene=traQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490582.1;locus_tag=PUW31_22920;product=type-F conjugative transfer system pilin chaperone TraQ;protein_id=WJH10829.1;transl_table=11 CP118129.1 Genbank gene 60959 61702 . - . ID=gene-PUW31_22925;Name=traF;gbkey=Gene;gene=traF;gene_biotype=protein_coding;locus_tag=PUW31_22925 CP118129.1 Protein Homology CDS 60959 61702 . - 0 ID=cds-WJH10830.1;Parent=gene-PUW31_22925;Dbxref=NCBI_GP:WJH10830.1;Name=WJH10830.1;gbkey=CDS;gene=traF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490581.1;locus_tag=PUW31_22925;product=type-F conjugative transfer system pilin assembly protein TraF;protein_id=WJH10830.1;transl_table=11 CP118129.1 Genbank gene 61715 61930 . - . ID=gene-PUW31_22930;Name=PUW31_22930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22930 CP118129.1 Protein Homology CDS 61715 61930 . - 0 ID=cds-WJH10831.1;Parent=gene-PUW31_22930;Dbxref=NCBI_GP:WJH10831.1;Name=WJH10831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746544.1;locus_tag=PUW31_22930;product=conjugal transfer protein TrbE;protein_id=WJH10831.1;transl_table=11 CP118129.1 Genbank gene 61941 62417 . - . ID=gene-PUW31_22935;Name=PUW31_22935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22935 CP118129.1 Protein Homology CDS 61941 62417 . - 0 ID=cds-WJH10832.1;Parent=gene-PUW31_22935;Dbxref=NCBI_GP:WJH10832.1;Name=WJH10832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746543.1;locus_tag=PUW31_22935;product=hypothetical protein;protein_id=WJH10832.1;transl_table=11 CP118129.1 Genbank gene 62428 64245 . - . ID=gene-PUW31_22940;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=PUW31_22940 CP118129.1 Protein Homology CDS 62428 64245 . - 0 ID=cds-WJH10833.1;Parent=gene-PUW31_22940;Dbxref=NCBI_GP:WJH10833.1;Name=WJH10833.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490579.1;locus_tag=PUW31_22940;product=type-F conjugative transfer system mating-pair stabilization protein TraN;protein_id=WJH10833.1;transl_table=11 CP118129.1 Genbank pseudogene 64242 64660 . - . ID=gene-PUW31_22945;Name=PUW31_22945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_22945;pseudo=true CP118129.1 Protein Homology CDS 64242 64660 . - 0 ID=cds-PUW31_22945;Parent=gene-PUW31_22945;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001229397.1;locus_tag=PUW31_22945;product=HNH endonuclease signature motif containing protein;pseudo=true;transl_table=11 CP118129.1 Genbank gene 64691 65329 . - . ID=gene-PUW31_22950;Name=trbC;gbkey=Gene;gene=trbC;gene_biotype=protein_coding;locus_tag=PUW31_22950 CP118129.1 Protein Homology CDS 64691 65329 . - 0 ID=cds-WJH10834.1;Parent=gene-PUW31_22950;Dbxref=NCBI_GP:WJH10834.1;Name=WJH10834.1;gbkey=CDS;gene=trbC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490578.1;locus_tag=PUW31_22950;product=type-F conjugative transfer system pilin assembly protein TrbC;protein_id=WJH10834.1;transl_table=11 CP118129.1 Genbank gene 65314 65622 . - . ID=gene-PUW31_22955;Name=PUW31_22955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22955 CP118129.1 Protein Homology CDS 65314 65622 . - 0 ID=cds-WJH10835.1;Parent=gene-PUW31_22955;Dbxref=NCBI_GP:WJH10835.1;Name=WJH10835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490577.1;locus_tag=PUW31_22955;product=hypothetical protein;protein_id=WJH10835.1;transl_table=11 CP118129.1 Genbank gene 65641 66633 . - . ID=gene-PUW31_22960;Name=PUW31_22960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22960 CP118129.1 Protein Homology CDS 65641 66633 . - 0 ID=cds-WJH10836.1;Parent=gene-PUW31_22960;Dbxref=NCBI_GP:WJH10836.1;Name=WJH10836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490576.1;locus_tag=PUW31_22960;product=conjugal transfer pilus assembly protein TraU;protein_id=WJH10836.1;transl_table=11 CP118129.1 Genbank gene 66630 67262 . - . ID=gene-PUW31_22965;Name=traW;gbkey=Gene;gene=traW;gene_biotype=protein_coding;locus_tag=PUW31_22965 CP118129.1 Protein Homology CDS 66630 67262 . - 0 ID=cds-WJH10837.1;Parent=gene-PUW31_22965;Dbxref=NCBI_GP:WJH10837.1;Name=WJH10837.1;gbkey=CDS;gene=traW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490575.1;locus_tag=PUW31_22965;product=type-F conjugative transfer system protein TraW;protein_id=WJH10837.1;transl_table=11 CP118129.1 Genbank gene 67259 67645 . - . ID=gene-PUW31_22970;Name=trbI;gbkey=Gene;gene=trbI;gene_biotype=protein_coding;locus_tag=PUW31_22970 CP118129.1 Protein Homology CDS 67259 67645 . - 0 ID=cds-WJH10838.1;Parent=gene-PUW31_22970;Dbxref=NCBI_GP:WJH10838.1;Name=WJH10838.1;gbkey=CDS;gene=trbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490574.1;locus_tag=PUW31_22970;product=type-F conjugative transfer system protein TrbI;protein_id=WJH10838.1;transl_table=11 CP118129.1 Genbank gene 67620 70268 . - . ID=gene-PUW31_22975;Name=traC;gbkey=Gene;gene=traC;gene_biotype=protein_coding;locus_tag=PUW31_22975 CP118129.1 Protein Homology CDS 67620 70268 . - 0 ID=cds-WJH10839.1;Parent=gene-PUW31_22975;Dbxref=NCBI_GP:WJH10839.1;Name=WJH10839.1;gbkey=CDS;gene=traC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490573.1;locus_tag=PUW31_22975;product=type IV secretion system protein TraC;protein_id=WJH10839.1;transl_table=11 CP118129.1 Genbank gene 70284 70667 . - . ID=gene-PUW31_22980;Name=PUW31_22980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22980 CP118129.1 Protein Homology CDS 70284 70667 . - 0 ID=cds-WJH10840.1;Parent=gene-PUW31_22980;Dbxref=NCBI_GP:WJH10840.1;Name=WJH10840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000870327.1;locus_tag=PUW31_22980;product=hypothetical protein;protein_id=WJH10840.1;transl_table=11 CP118129.1 Genbank gene 70664 71131 . - . ID=gene-PUW31_22985;Name=PUW31_22985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22985 CP118129.1 Protein Homology CDS 70664 71131 . - 0 ID=cds-WJH10841.1;Parent=gene-PUW31_22985;Dbxref=NCBI_GP:WJH10841.1;Name=WJH10841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490572.1;locus_tag=PUW31_22985;product=hypothetical protein;protein_id=WJH10841.1;transl_table=11 CP118129.1 Genbank gene 71124 71345 . - . ID=gene-PUW31_22990;Name=traR;gbkey=Gene;gene=traR;gene_biotype=protein_coding;locus_tag=PUW31_22990 CP118129.1 Protein Homology CDS 71124 71345 . - 0 ID=cds-WJH10842.1;Parent=gene-PUW31_22990;Dbxref=NCBI_GP:WJH10842.1;Name=WJH10842.1;gbkey=CDS;gene=traR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490571.1;locus_tag=PUW31_22990;product=conjugal transfer protein TraR;protein_id=WJH10842.1;transl_table=11 CP118129.1 Genbank gene 71480 71995 . - . ID=gene-PUW31_22995;Name=traV;gbkey=Gene;gene=traV;gene_biotype=protein_coding;locus_tag=PUW31_22995 CP118129.1 Protein Homology CDS 71480 71995 . - 0 ID=cds-WJH10843.1;Parent=gene-PUW31_22995;Dbxref=NCBI_GP:WJH10843.1;Name=WJH10843.1;gbkey=CDS;gene=traV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490570.1;locus_tag=PUW31_22995;product=type IV conjugative transfer system lipoprotein TraV;protein_id=WJH10843.1;transl_table=11 CP118129.1 Genbank gene 71992 72216 . - . ID=gene-PUW31_23000;Name=PUW31_23000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_23000 CP118129.1 Protein Homology CDS 71992 72216 . - 0 ID=cds-WJH10844.1;Parent=gene-PUW31_23000;Dbxref=NCBI_GP:WJH10844.1;Name=WJH10844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490569.1;locus_tag=PUW31_23000;product=DUF2689 domain-containing protein;protein_id=WJH10844.1;transl_table=11 CP118129.1 Genbank gene 72194 72790 . - . ID=gene-PUW31_23005;Name=PUW31_23005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_23005 CP118129.1 Protein Homology CDS 72194 72790 . - 0 ID=cds-WJH10845.1;Parent=gene-PUW31_23005;Dbxref=NCBI_GP:WJH10845.1;Name=WJH10845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490568.1;locus_tag=PUW31_23005;product=conjugal transfer protein TraP;protein_id=WJH10845.1;transl_table=11 CP118129.1 Genbank pseudogene 72780 74199 . - . ID=gene-PUW31_23010;Name=PUW31_23010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_23010;pseudo=true CP118129.1 Protein Homology CDS 72780 74199 . - 0 ID=cds-PUW31_23010;Parent=gene-PUW31_23010;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490567.1;locus_tag=PUW31_23010;product=conjugal transfer protein TraB;pseudo=true;transl_table=11 CP118129.1 Genbank gene 74199 74939 . - . ID=gene-PUW31_23015;Name=traK;gbkey=Gene;gene=traK;gene_biotype=protein_coding;locus_tag=PUW31_23015 CP118129.1 Protein Homology CDS 74199 74939 . - 0 ID=cds-WJH10846.1;Parent=gene-PUW31_23015;Dbxref=NCBI_GP:WJH10846.1;Name=WJH10846.1;gbkey=CDS;gene=traK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490566.1;locus_tag=PUW31_23015;product=type-F conjugative transfer system secretin TraK;protein_id=WJH10846.1;transl_table=11 CP118129.1 Genbank gene 74926 75492 . - . ID=gene-PUW31_23020;Name=traE;gbkey=Gene;gene=traE;gene_biotype=protein_coding;locus_tag=PUW31_23020 CP118129.1 Protein Homology CDS 74926 75492 . - 0 ID=cds-WJH10847.1;Parent=gene-PUW31_23020;Dbxref=NCBI_GP:WJH10847.1;Name=WJH10847.1;gbkey=CDS;gene=traE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490565.1;locus_tag=PUW31_23020;product=type IV conjugative transfer system protein TraE;protein_id=WJH10847.1;transl_table=11 CP118129.1 Genbank gene 75514 75825 . - . ID=gene-PUW31_23025;Name=traL;gbkey=Gene;gene=traL;gene_biotype=protein_coding;locus_tag=PUW31_23025 CP118129.1 Protein Homology CDS 75514 75825 . - 0 ID=cds-WJH10848.1;Parent=gene-PUW31_23025;Dbxref=NCBI_GP:WJH10848.1;Name=WJH10848.1;gbkey=CDS;gene=traL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490564.1;locus_tag=PUW31_23025;product=type IV conjugative transfer system protein TraL;protein_id=WJH10848.1;transl_table=11 CP118129.1 Genbank gene 75840 76202 . - . ID=gene-PUW31_23030;Name=traA;gbkey=Gene;gene=traA;gene_biotype=protein_coding;locus_tag=PUW31_23030 CP118129.1 Protein Homology CDS 75840 76202 . - 0 ID=cds-WJH10849.1;Parent=gene-PUW31_23030;Dbxref=NCBI_GP:WJH10849.1;Name=WJH10849.1;gbkey=CDS;gene=traA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490563.1;locus_tag=PUW31_23030;product=type IV conjugative transfer system pilin TraA;protein_id=WJH10849.1;transl_table=11 CP118129.1 Genbank gene 76244 76645 . - . ID=gene-PUW31_23035;Name=traY;gbkey=Gene;gene=traY;gene_biotype=protein_coding;locus_tag=PUW31_23035 CP118129.1 Protein Homology CDS 76244 76645 . - 0 ID=cds-WJH10850.1;Parent=gene-PUW31_23035;Dbxref=NCBI_GP:WJH10850.1;Name=WJH10850.1;gbkey=CDS;gene=traY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001672631.1;locus_tag=PUW31_23035;product=conjugal transfer relaxosome protein TraY;protein_id=WJH10850.1;transl_table=11 CP118129.1 Genbank gene 76738 77427 . - . ID=gene-PUW31_23040;Name=traJ;gbkey=Gene;gene=traJ;gene_biotype=protein_coding;locus_tag=PUW31_23040 CP118129.1 Protein Homology CDS 76738 77427 . - 0 ID=cds-WJH10851.1;Parent=gene-PUW31_23040;Dbxref=NCBI_GP:WJH10851.1;Name=WJH10851.1;gbkey=CDS;gene=traJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746563.1;locus_tag=PUW31_23040;product=conjugal transfer transcriptional regulator TraJ;protein_id=WJH10851.1;transl_table=11 CP118129.1 Genbank gene 77629 78000 . - . ID=gene-PUW31_23045;Name=traM;gbkey=Gene;gene=traM;gene_biotype=protein_coding;locus_tag=PUW31_23045 CP118129.1 Protein Homology CDS 77629 78000 . - 0 ID=cds-WJH10852.1;Parent=gene-PUW31_23045;Dbxref=NCBI_GP:WJH10852.1;Name=WJH10852.1;gbkey=CDS;gene=traM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151569.1;locus_tag=PUW31_23045;product=relaxosome protein TraM;protein_id=WJH10852.1;transl_table=11 CP118129.1 Genbank gene 78423 78893 . + . ID=gene-PUW31_23050;Name=PUW31_23050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_23050 CP118129.1 Protein Homology CDS 78423 78893 . + 0 ID=cds-WJH10908.1;Parent=gene-PUW31_23050;Dbxref=NCBI_GP:WJH10908.1;Name=WJH10908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490559.1;locus_tag=PUW31_23050;product=transglycosylase SLT domain-containing protein;protein_id=WJH10908.1;transl_table=11 CP118129.1 Genbank pseudogene 79204 80022 . - . ID=gene-PUW31_23055;Name=PUW31_23055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_23055;pseudo=true CP118129.1 Protein Homology CDS 79204 80022 . - 0 ID=cds-PUW31_23055;Parent=gene-PUW31_23055;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234456.1;locus_tag=PUW31_23055;product=DUF932 domain-containing protein;pseudo=true;transl_table=11 CP118129.1 Genbank gene 80125 80283 . - . ID=gene-PUW31_23060;Name=PUW31_23060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_23060 CP118129.1 Protein Homology CDS 80125 80283 . - 0 ID=cds-WJH10853.1;Parent=gene-PUW31_23060;Dbxref=NCBI_GP:WJH10853.1;Name=WJH10853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001704449.1;locus_tag=PUW31_23060;product=hypothetical protein;protein_id=WJH10853.1;transl_table=11 CP118129.1 Genbank gene 80369 80497 . - . ID=gene-PUW31_23065;Name=PUW31_23065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_23065 CP118129.1 GeneMarkS-2+ CDS 80369 80497 . - 0 ID=cds-WJH10854.1;Parent=gene-PUW31_23065;Dbxref=NCBI_GP:WJH10854.1;Name=WJH10854.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_23065;product=hypothetical protein;protein_id=WJH10854.1;transl_table=11 CP118129.1 Genbank pseudogene 80532 81188 . - . ID=gene-PUW31_23070;Name=PUW31_23070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_23070;pseudo=true CP118129.1 Protein Homology CDS 80532 81188 . - 0 ID=cds-PUW31_23070;Parent=gene-PUW31_23070;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490558.1;locus_tag=PUW31_23070;product=plasmid SOS inhibition protein A;pseudo=true;transl_table=11 CP118129.1 Genbank pseudogene 81182 81316 . - . ID=gene-PUW31_23075;Name=PUW31_23075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_23075;pseudo=true CP118129.1 Protein Homology CDS 81182 81316 . - 0 ID=cds-PUW31_23075;Parent=gene-PUW31_23075;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490557.1;locus_tag=PUW31_23075;product=conjugation system SOS inhibitor PsiB family protein;pseudo=true;transl_table=11 CP118129.1 Genbank pseudogene 81356 83352 . - . ID=gene-PUW31_23080;Name=PUW31_23080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_23080;pseudo=true CP118129.1 Protein Homology CDS 81356 83352 . - 0 ID=cds-PUW31_23080;Parent=gene-PUW31_23080;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490556.1;locus_tag=PUW31_23080;product=ParB/RepB/Spo0J family partition protein;pseudo=true;transl_table=11 CP118129.1 Genbank gene 83421 83663 . - . ID=gene-PUW31_23085;Name=PUW31_23085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_23085 CP118129.1 Protein Homology CDS 83421 83663 . - 0 ID=cds-WJH10855.1;Parent=gene-PUW31_23085;Dbxref=NCBI_GP:WJH10855.1;Name=WJH10855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490555.1;locus_tag=PUW31_23085;product=DUF905 domain-containing protein;protein_id=WJH10855.1;transl_table=11 CP118129.1 Genbank pseudogene 83718 84237 . - . ID=gene-PUW31_23090;Name=PUW31_23090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PUW31_23090;pseudo=true CP118129.1 Protein Homology CDS 83718 84237 . - 0 ID=cds-PUW31_23090;Parent=gene-PUW31_23090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490554.1;locus_tag=PUW31_23090;product=single-stranded DNA-binding protein SSB2;pseudo=true;transl_table=11 CP118129.1 Genbank gene 84831 85010 . - . ID=gene-PUW31_23095;Name=PUW31_23095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_23095 CP118129.1 GeneMarkS-2+ CDS 84831 85010 . - 0 ID=cds-WJH10856.1;Parent=gene-PUW31_23095;Dbxref=NCBI_GP:WJH10856.1;Name=WJH10856.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PUW31_23095;product=hypothetical protein;protein_id=WJH10856.1;transl_table=11 CP118129.1 Genbank gene 84974 85297 . - . ID=gene-PUW31_23100;Name=PUW31_23100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_23100 CP118129.1 Protein Homology CDS 84974 85297 . - 0 ID=cds-WJH10857.1;Parent=gene-PUW31_23100;Dbxref=NCBI_GP:WJH10857.1;Name=WJH10857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490553.1;locus_tag=PUW31_23100;product=DNA polymerase III subunit theta;protein_id=WJH10857.1;transl_table=11 CP118129.1 Genbank gene 85533 85967 . - . ID=gene-PUW31_23105;Name=PUW31_23105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_23105 CP118129.1 Protein Homology CDS 85533 85967 . - 0 ID=cds-WJH10858.1;Parent=gene-PUW31_23105;Dbxref=NCBI_GP:WJH10858.1;Name=WJH10858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490552.1;locus_tag=PUW31_23105;product=DUF1380 family protein;protein_id=WJH10858.1;transl_table=11 CP118129.1 Genbank gene 86034 86468 . - . ID=gene-PUW31_23110;Name=PUW31_23110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_23110 CP118129.1 Protein Homology CDS 86034 86468 . - 0 ID=cds-WJH10859.1;Parent=gene-PUW31_23110;Dbxref=NCBI_GP:WJH10859.1;Name=WJH10859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490551.1;locus_tag=PUW31_23110;product=antirestriction protein;protein_id=WJH10859.1;transl_table=11 CP118129.1 Genbank gene 86964 87728 . - . ID=gene-PUW31_23115;Name=PUW31_23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_23115 CP118129.1 Protein Homology CDS 86964 87728 . - 0 ID=cds-WJH10860.1;Parent=gene-PUW31_23115;Dbxref=NCBI_GP:WJH10860.1;Name=WJH10860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490550.1;locus_tag=PUW31_23115;product=hypothetical protein;protein_id=WJH10860.1;transl_table=11 CP118129.1 Genbank gene 87800 88213 . - . ID=gene-PUW31_23120;Name=PUW31_23120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_23120 CP118129.1 Protein Homology CDS 87800 88213 . - 0 ID=cds-WJH10861.1;Parent=gene-PUW31_23120;Dbxref=NCBI_GP:WJH10861.1;Name=WJH10861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000990115.1;locus_tag=PUW31_23120;product=DUF1380 family protein;protein_id=WJH10861.1;transl_table=11 CP118129.1 Genbank gene 88269 88490 . - . ID=gene-PUW31_22575;Name=PUW31_22575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PUW31_22575 CP118129.1 Protein Homology CDS 88269 88490 . - 0 ID=cds-WJH10862.1;Parent=gene-PUW31_22575;Dbxref=NCBI_GP:WJH10862.1;Name=WJH10862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490549.1;locus_tag=PUW31_22575;product=hypothetical protein;protein_id=WJH10862.1;transl_table=11 ###