##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build PDT001537110.3 #!genome-build-accession NCBI_Assembly:GCA_027055195.2 #!annotation-date 06/20/2026 21:20:12 #!annotation-source NCBI ##sequence-region DALFDA020000001.1 1 223741 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000001.1 tpg region 1 223741 . + . ID=DALFDA020000001.1:1..223741;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000001.1 tpg gene 1 460 . + . ID=gene-O5C65_000001;Name=O5C65_000001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000001;partial=true;start_range=.,1 DALFDA020000001.1 Protein Homology CDS 1 460 . + 1 ID=cds-HJH9170197.1;Parent=gene-O5C65_000001;Dbxref=NCBI_GP:HJH9170197.1;Name=HJH9170197.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461401.1;locus_tag=O5C65_000001;partial=true;product=phosphate acyltransferase;protein_id=HJH9170197.1;start_range=.,1;transl_table=11 DALFDA020000001.1 tpg gene 501 791 . + . ID=gene-O5C65_000002;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=O5C65_000002 DALFDA020000001.1 Protein Homology CDS 501 791 . + 0 ID=cds-HJH9170198.1;Parent=gene-O5C65_000002;Dbxref=NCBI_GP:HJH9170198.1;Name=HJH9170198.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461400.1;locus_tag=O5C65_000002;product=ethanolamine utilization microcompartment protein EutM;protein_id=HJH9170198.1;transl_table=11 DALFDA020000001.1 tpg gene 904 1191 . + . ID=gene-O5C65_000003;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=O5C65_000003 DALFDA020000001.1 Protein Homology CDS 904 1191 . + 0 ID=cds-HJH9170199.1;Parent=gene-O5C65_000003;Dbxref=NCBI_GP:HJH9170199.1;Name=HJH9170199.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=O5C65_000003;product=ethanolamine utilization microcompartment protein EutN;protein_id=HJH9170199.1;transl_table=11 DALFDA020000001.1 tpg gene 1203 2606 . + . ID=gene-O5C65_000004;Name=O5C65_000004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000004 DALFDA020000001.1 Protein Homology CDS 1203 2606 . + 0 ID=cds-HJH9170200.1;Parent=gene-O5C65_000004;Dbxref=NCBI_GP:HJH9170200.1;Name=HJH9170200.1;Ontology_term=GO:0004029,GO:0008774;gbkey=CDS;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA,acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461398.1;locus_tag=O5C65_000004;product=aldehyde dehydrogenase family protein;protein_id=HJH9170200.1;transl_table=11 DALFDA020000001.1 tpg gene 2617 3456 . + . ID=gene-O5C65_000005;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=O5C65_000005 DALFDA020000001.1 Protein Homology CDS 2617 3456 . + 0 ID=cds-HJH9170201.1;Parent=gene-O5C65_000005;Dbxref=NCBI_GP:HJH9170201.1;Name=HJH9170201.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461397.1;locus_tag=O5C65_000005;product=ethanolamine utilization protein EutJ;protein_id=HJH9170201.1;transl_table=11 DALFDA020000001.1 tpg gene 3446 4633 . + . ID=gene-O5C65_000006;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=O5C65_000006 DALFDA020000001.1 Protein Homology CDS 3446 4633 . + 0 ID=cds-HJH9170202.1;Parent=gene-O5C65_000006;Dbxref=NCBI_GP:HJH9170202.1;Name=HJH9170202.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461396.1;locus_tag=O5C65_000006;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=HJH9170202.1;transl_table=11 DALFDA020000001.1 tpg gene 4753 5979 . + . ID=gene-O5C65_000007;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=O5C65_000007 DALFDA020000001.1 Protein Homology CDS 4753 5979 . + 0 ID=cds-HJH9170203.1;Parent=gene-O5C65_000007;Dbxref=NCBI_GP:HJH9170203.1;Name=HJH9170203.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461395.1;locus_tag=O5C65_000007;product=ethanolamine utilization protein EutH;protein_id=HJH9170203.1;transl_table=11 DALFDA020000001.1 tpg gene 5976 7379 . + . ID=gene-O5C65_000008;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=O5C65_000008 DALFDA020000001.1 Protein Homology CDS 5976 7379 . + 0 ID=cds-HJH9170204.1;Parent=gene-O5C65_000008;Dbxref=NCBI_GP:HJH9170204.1;Name=HJH9170204.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461394.1;locus_tag=O5C65_000008;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=HJH9170204.1;transl_table=11 DALFDA020000001.1 tpg gene 7391 8752 . + . ID=gene-O5C65_000009;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=O5C65_000009 DALFDA020000001.1 Protein Homology CDS 7391 8752 . + 0 ID=cds-HJH9170205.1;Parent=gene-O5C65_000009;Dbxref=NCBI_GP:HJH9170205.1;Name=HJH9170205.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461393.1;locus_tag=O5C65_000009;product=ethanolamine ammonia-lyase subunit alpha;protein_id=HJH9170205.1;transl_table=11 DALFDA020000001.1 tpg gene 8771 9667 . + . ID=gene-O5C65_000010;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=O5C65_000010 DALFDA020000001.1 Protein Homology CDS 8771 9667 . + 0 ID=cds-HJH9170206.1;Parent=gene-O5C65_000010;Dbxref=NCBI_GP:HJH9170206.1;Name=HJH9170206.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461392.1;locus_tag=O5C65_000010;product=ethanolamine ammonia-lyase subunit EutC;protein_id=HJH9170206.1;transl_table=11 DALFDA020000001.1 tpg gene 9677 10336 . + . ID=gene-O5C65_000011;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=O5C65_000011 DALFDA020000001.1 Protein Homology CDS 9677 10336 . + 0 ID=cds-HJH9170207.1;Parent=gene-O5C65_000011;Dbxref=NCBI_GP:HJH9170207.1;Name=HJH9170207.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461391.1;locus_tag=O5C65_000011;product=ethanolamine utilization microcompartment protein EutL;protein_id=HJH9170207.1;transl_table=11 DALFDA020000001.1 tpg gene 10349 10843 . + . ID=gene-O5C65_000012;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=O5C65_000012 DALFDA020000001.1 Protein Homology CDS 10349 10843 . + 0 ID=cds-HJH9170208.1;Parent=gene-O5C65_000012;Dbxref=NCBI_GP:HJH9170208.1;Name=HJH9170208.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461390.1;locus_tag=O5C65_000012;product=ethanolamine utilization microcompartment protein EutK;protein_id=HJH9170208.1;transl_table=11 DALFDA020000001.1 tpg gene 10891 11943 . + . ID=gene-O5C65_000013;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=O5C65_000013 DALFDA020000001.1 Protein Homology CDS 10891 11943 . + 0 ID=cds-HJH9170209.1;Parent=gene-O5C65_000013;Dbxref=NCBI_GP:HJH9170209.1;Name=HJH9170209.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461389.1;locus_tag=O5C65_000013;product=HTH-type transcriptional regulator EutR;protein_id=HJH9170209.1;transl_table=11 DALFDA020000001.1 tpg gene 12143 13420 . - . ID=gene-O5C65_000014;Name=O5C65_000014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000014 DALFDA020000001.1 Protein Homology CDS 12143 13420 . - 0 ID=cds-HJH9170210.1;Parent=gene-O5C65_000014;Dbxref=NCBI_GP:HJH9170210.1;Name=HJH9170210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461388.1;locus_tag=O5C65_000014;product=DUF1963 domain-containing protein;protein_id=HJH9170210.1;transl_table=11 DALFDA020000001.1 tpg gene 13549 13878 . - . ID=gene-O5C65_000015;Name=O5C65_000015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000015 DALFDA020000001.1 Protein Homology CDS 13549 13878 . - 0 ID=cds-HJH9170211.1;Parent=gene-O5C65_000015;Dbxref=NCBI_GP:HJH9170211.1;Name=HJH9170211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461387.1;locus_tag=O5C65_000015;product=hypothetical protein;protein_id=HJH9170211.1;transl_table=11 DALFDA020000001.1 tpg gene 13899 14798 . - . ID=gene-O5C65_000016;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=O5C65_000016 DALFDA020000001.1 Protein Homology CDS 13899 14798 . - 0 ID=cds-HJH9170212.1;Parent=gene-O5C65_000016;Dbxref=NCBI_GP:HJH9170212.1;Name=HJH9170212.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461386.1;locus_tag=O5C65_000016;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=HJH9170212.1;transl_table=11 DALFDA020000001.1 tpg gene 14801 15670 . - . ID=gene-O5C65_000017;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=O5C65_000017 DALFDA020000001.1 Protein Homology CDS 14801 15670 . - 0 ID=cds-HJH9170213.1;Parent=gene-O5C65_000017;Dbxref=NCBI_GP:HJH9170213.1;Name=HJH9170213.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461385.1;locus_tag=O5C65_000017;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=HJH9170213.1;transl_table=11 DALFDA020000001.1 tpg gene 15883 16308 . + . ID=gene-O5C65_000018;Name=O5C65_000018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000018 DALFDA020000001.1 Protein Homology CDS 15883 16308 . + 0 ID=cds-HJH9170214.1;Parent=gene-O5C65_000018;Dbxref=NCBI_GP:HJH9170214.1;Name=HJH9170214.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311332.2;locus_tag=O5C65_000018;product=GNAT family acetyltransferase;protein_id=HJH9170214.1;transl_table=11 DALFDA020000001.1 tpg gene 16295 16744 . + . ID=gene-O5C65_000019;Name=O5C65_000019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000019 DALFDA020000001.1 Protein Homology CDS 16295 16744 . + 0 ID=cds-HJH9170215.1;Parent=gene-O5C65_000019;Dbxref=NCBI_GP:HJH9170215.1;Name=HJH9170215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461383.1;locus_tag=O5C65_000019;product=DUF2919 domain-containing protein;protein_id=HJH9170215.1;transl_table=11 DALFDA020000001.1 tpg gene 16806 17381 . + . ID=gene-O5C65_000020;Name=O5C65_000020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000020 DALFDA020000001.1 Protein Homology CDS 16806 17381 . + 0 ID=cds-HJH9170216.1;Parent=gene-O5C65_000020;Dbxref=NCBI_GP:HJH9170216.1;Name=HJH9170216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461382.1;locus_tag=O5C65_000020;product=RpoE-regulated lipoprotein;protein_id=HJH9170216.1;transl_table=11 DALFDA020000001.1 tpg gene 17476 18375 . + . ID=gene-O5C65_000021;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=O5C65_000021 DALFDA020000001.1 Protein Homology CDS 17476 18375 . + 0 ID=cds-HJH9170217.1;Parent=gene-O5C65_000021;Dbxref=NCBI_GP:HJH9170217.1;Name=HJH9170217.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461381.1;locus_tag=O5C65_000021;product=porphyrinogen peroxidase;protein_id=HJH9170217.1;transl_table=11 DALFDA020000001.1 tpg gene 18623 19414 . + . ID=gene-O5C65_000022;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=O5C65_000022 DALFDA020000001.1 Protein Homology CDS 18623 19414 . + 0 ID=cds-HJH9170218.1;Parent=gene-O5C65_000022;Dbxref=NCBI_GP:HJH9170218.1;Name=HJH9170218.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461380.1;locus_tag=O5C65_000022;product=SDR family oxidoreductase UcpA;protein_id=HJH9170218.1;transl_table=11 DALFDA020000001.1 tpg gene 19572 20588 . + . ID=gene-O5C65_000023;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=O5C65_000023 DALFDA020000001.1 Protein Homology CDS 19572 20588 . + 0 ID=cds-HJH9170219.1;Parent=gene-O5C65_000023;Dbxref=NCBI_GP:HJH9170219.1;Name=HJH9170219.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461379.1;locus_tag=O5C65_000023;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=HJH9170219.1;transl_table=11 DALFDA020000001.1 tpg gene 20588 21421 . + . ID=gene-O5C65_000024;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=O5C65_000024 DALFDA020000001.1 Protein Homology CDS 20588 21421 . + 0 ID=cds-HJH9170220.1;Parent=gene-O5C65_000024;Dbxref=NCBI_GP:HJH9170220.1;Name=HJH9170220.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=O5C65_000024;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=HJH9170220.1;transl_table=11 DALFDA020000001.1 tpg gene 21421 22296 . + . ID=gene-O5C65_000025;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=O5C65_000025 DALFDA020000001.1 Protein Homology CDS 21421 22296 . + 0 ID=cds-HJH9170221.1;Parent=gene-O5C65_000025;Dbxref=NCBI_GP:HJH9170221.1;Name=HJH9170221.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461377.1;locus_tag=O5C65_000025;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=HJH9170221.1;transl_table=11 DALFDA020000001.1 tpg gene 22286 23380 . + . ID=gene-O5C65_000026;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=O5C65_000026 DALFDA020000001.1 Protein Homology CDS 22286 23380 . + 0 ID=cds-HJH9170222.1;Parent=gene-O5C65_000026;Dbxref=NCBI_GP:HJH9170222.1;Name=HJH9170222.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461376.1;locus_tag=O5C65_000026;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=HJH9170222.1;transl_table=11 DALFDA020000001.1 tpg gene 23500 24411 . + . ID=gene-O5C65_000027;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=O5C65_000027 DALFDA020000001.1 Protein Homology CDS 23500 24411 . + 0 ID=cds-HJH9170223.1;Parent=gene-O5C65_000027;Dbxref=NCBI_GP:HJH9170223.1;Name=HJH9170223.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461375.1;locus_tag=O5C65_000027;product=cysteine synthase CysM;protein_id=HJH9170223.1;transl_table=11 DALFDA020000001.1 tpg gene 24444 24821 . - . ID=gene-O5C65_000028;Name=O5C65_000028;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000028 DALFDA020000001.1 Protein Homology CDS 24444 24821 . - 0 ID=cds-HJH9170224.1;Parent=gene-O5C65_000028;Dbxref=NCBI_GP:HJH9170224.1;Name=HJH9170224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000710726.1;locus_tag=O5C65_000028;product=YfeK family protein;protein_id=HJH9170224.1;transl_table=11 DALFDA020000001.1 tpg gene 24880 25599 . - . ID=gene-O5C65_000029;Name=O5C65_000029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000029 DALFDA020000001.1 Protein Homology CDS 24880 25599 . - 0 ID=cds-HJH9170225.1;Parent=gene-O5C65_000029;Dbxref=NCBI_GP:HJH9170225.1;Name=HJH9170225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461372.1;locus_tag=O5C65_000029;product=GMP synthase;protein_id=HJH9170225.1;transl_table=11 DALFDA020000001.1 tpg gene 25614 26906 . - . ID=gene-O5C65_000030;Name=ptsJ;gbkey=Gene;gene=ptsJ;gene_biotype=protein_coding;locus_tag=O5C65_000030 DALFDA020000001.1 Protein Homology CDS 25614 26906 . - 0 ID=cds-HJH9170226.1;Parent=gene-O5C65_000030;Dbxref=NCBI_GP:HJH9170226.1;Name=HJH9170226.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptsJ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461371.1;locus_tag=O5C65_000030;product=transcriptional regulator PtsJ;protein_id=HJH9170226.1;transl_table=11 DALFDA020000001.1 tpg gene 26989 27855 . + . ID=gene-O5C65_000031;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=O5C65_000031 DALFDA020000001.1 Protein Homology CDS 26989 27855 . + 0 ID=cds-HJH9170227.1;Parent=gene-O5C65_000031;Dbxref=NCBI_GP:HJH9170227.1;Name=HJH9170227.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461370.1;locus_tag=O5C65_000031;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=HJH9170227.1;transl_table=11 DALFDA020000001.1 tpg gene 27852 28091 . + . ID=gene-O5C65_000032;Name=O5C65_000032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000032 DALFDA020000001.1 Protein Homology CDS 27852 28091 . + 0 ID=cds-HJH9170228.1;Parent=gene-O5C65_000032;Dbxref=NCBI_GP:HJH9170228.1;Name=HJH9170228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461369.1;locus_tag=O5C65_000032;product=cytoplasmic protein;protein_id=HJH9170228.1;transl_table=11 DALFDA020000001.1 tpg gene 28241 28750 . - . ID=gene-O5C65_000033;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=O5C65_000033 DALFDA020000001.1 Protein Homology CDS 28241 28750 . - 0 ID=cds-HJH9170229.1;Parent=gene-O5C65_000033;Dbxref=NCBI_GP:HJH9170229.1;Name=HJH9170229.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=O5C65_000033;product=PTS glucose transporter subunit IIA;protein_id=HJH9170229.1;transl_table=11 DALFDA020000001.1 tpg gene 28791 30518 . - . ID=gene-O5C65_000034;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=O5C65_000034 DALFDA020000001.1 Protein Homology CDS 28791 30518 . - 0 ID=cds-HJH9170230.1;Parent=gene-O5C65_000034;Dbxref=NCBI_GP:HJH9170230.1;Name=HJH9170230.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870786.1;locus_tag=O5C65_000034;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=HJH9170230.1;transl_table=11 DALFDA020000001.1 tpg gene 30567 30824 . - . ID=gene-O5C65_000035;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=O5C65_000035 DALFDA020000001.1 Protein Homology CDS 30567 30824 . - 0 ID=cds-HJH9170231.1;Parent=gene-O5C65_000035;Dbxref=NCBI_GP:HJH9170231.1;Name=HJH9170231.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=O5C65_000035;product=phosphocarrier protein Hpr;protein_id=HJH9170231.1;transl_table=11 DALFDA020000001.1 tpg gene 31208 32179 . - . ID=gene-O5C65_000036;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=O5C65_000036 DALFDA020000001.1 Protein Homology CDS 31208 32179 . - 0 ID=cds-HJH9170232.1;Parent=gene-O5C65_000036;Dbxref=NCBI_GP:HJH9170232.1;Name=HJH9170232.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=O5C65_000036;product=cysteine synthase A;protein_id=HJH9170232.1;transl_table=11 DALFDA020000001.1 tpg gene 32343 33104 . - . ID=gene-O5C65_000037;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=O5C65_000037 DALFDA020000001.1 Protein Homology CDS 32343 33104 . - 0 ID=cds-HJH9170233.1;Parent=gene-O5C65_000037;Dbxref=NCBI_GP:HJH9170233.1;Name=HJH9170233.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461364.1;locus_tag=O5C65_000037;product=sulfate transporter CysZ;protein_id=HJH9170233.1;transl_table=11 DALFDA020000001.1 tpg gene 33336 34322 . + . ID=gene-O5C65_000038;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=O5C65_000038 DALFDA020000001.1 Protein Homology CDS 33336 34322 . + 0 ID=cds-HJH9170234.1;Parent=gene-O5C65_000038;Dbxref=NCBI_GP:HJH9170234.1;Name=HJH9170234.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461363.1;locus_tag=O5C65_000038;product=cell division protein ZipA;protein_id=HJH9170234.1;transl_table=11 DALFDA020000001.1 tpg gene 34394 36409 . + . ID=gene-O5C65_000039;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=O5C65_000039 DALFDA020000001.1 Protein Homology CDS 34394 36409 . + 0 ID=cds-HJH9170235.1;Parent=gene-O5C65_000039;Dbxref=NCBI_GP:HJH9170235.1;Name=HJH9170235.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461362.1;locus_tag=O5C65_000039;product=NAD-dependent DNA ligase LigA;protein_id=HJH9170235.1;transl_table=11 DALFDA020000001.1 tpg gene 36411 36629 . + . ID=gene-O5C65_000040;Name=O5C65_000040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000040 DALFDA020000001.1 Protein Homology CDS 36411 36629 . + 0 ID=cds-HJH9170236.1;Parent=gene-O5C65_000040;Dbxref=NCBI_GP:HJH9170236.1;Name=HJH9170236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=O5C65_000040;product=DUF3820 family protein;protein_id=HJH9170236.1;transl_table=11 DALFDA020000001.1 tpg gene 36626 37624 . - . ID=gene-O5C65_000041;Name=O5C65_000041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000041 DALFDA020000001.1 Protein Homology CDS 36626 37624 . - 0 ID=cds-HJH9170237.1;Parent=gene-O5C65_000041;Dbxref=NCBI_GP:HJH9170237.1;Name=HJH9170237.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461360.2;locus_tag=O5C65_000041;product=bile acid:sodium symporter family protein;protein_id=HJH9170237.1;transl_table=11 DALFDA020000001.1 tpg gene 37714 38640 . + . ID=gene-O5C65_000042;Name=O5C65_000042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000042 DALFDA020000001.1 Protein Homology CDS 37714 38640 . + 0 ID=cds-HJH9170238.1;Parent=gene-O5C65_000042;Dbxref=NCBI_GP:HJH9170238.1;Name=HJH9170238.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461359.1;locus_tag=O5C65_000042;product=LysR family transcriptional regulator;protein_id=HJH9170238.1;transl_table=11 DALFDA020000001.1 tpg gene 38702 39463 . - . ID=gene-O5C65_000043;Name=O5C65_000043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000043 DALFDA020000001.1 Protein Homology CDS 38702 39463 . - 0 ID=cds-HJH9170239.1;Parent=gene-O5C65_000043;Dbxref=NCBI_GP:HJH9170239.1;Name=HJH9170239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461358.1;locus_tag=O5C65_000043;product=outer membrane protein;protein_id=HJH9170239.1;transl_table=11 DALFDA020000001.1 tpg gene 39719 40552 . + . ID=gene-O5C65_000044;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=O5C65_000044 DALFDA020000001.1 Protein Homology CDS 39719 40552 . + 0 ID=cds-HJH9170240.1;Parent=gene-O5C65_000044;Dbxref=NCBI_GP:HJH9170240.1;Name=HJH9170240.1;Ontology_term=GO:0055086,GO:0004731,GO:0005737;gbkey=CDS;gene=xapA;go_component=cytoplasm|0005737||IEA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing small molecule metabolic process|0055086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448816.1;locus_tag=O5C65_000044;product=xanthosine phosphorylase;protein_id=HJH9170240.1;transl_table=11 DALFDA020000001.1 tpg gene 40607 41863 . + . ID=gene-O5C65_000045;Name=O5C65_000045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000045 DALFDA020000001.1 Protein Homology CDS 40607 41863 . + 0 ID=cds-HJH9170241.1;Parent=gene-O5C65_000045;Dbxref=NCBI_GP:HJH9170241.1;Name=HJH9170241.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461356.1;locus_tag=O5C65_000045;product=nucleoside permease;protein_id=HJH9170241.1;transl_table=11 DALFDA020000001.1 tpg gene 41922 42080 . + . ID=gene-O5C65_000046;Name=O5C65_000046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000046 DALFDA020000001.1 Protein Homology CDS 41922 42080 . + 0 ID=cds-HJH9170242.1;Parent=gene-O5C65_000046;Dbxref=NCBI_GP:HJH9170242.1;Name=HJH9170242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658729.1;locus_tag=O5C65_000046;product=XapX domain-containing protein;protein_id=HJH9170242.1;transl_table=11 DALFDA020000001.1 tpg gene 42132 43016 . + . ID=gene-O5C65_000047;Name=O5C65_000047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000047 DALFDA020000001.1 Protein Homology CDS 42132 43016 . + 0 ID=cds-HJH9170243.1;Parent=gene-O5C65_000047;Dbxref=NCBI_GP:HJH9170243.1;Name=HJH9170243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461355.1;locus_tag=O5C65_000047;product=LysR family transcriptional regulator;protein_id=HJH9170243.1;transl_table=11 DALFDA020000001.1 tpg gene 43311 43386 . - . ID=gene-O5C65_000048;Name=O5C65_000048;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_000048 DALFDA020000001.1 tRNAscan-SE tRNA 43311 43386 . - . ID=rna-O5C65_000048;Parent=gene-O5C65_000048;anticodon=(pos:complement(43351..43353));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_000048;product=tRNA-Lys DALFDA020000001.1 tRNAscan-SE exon 43311 43386 . - . ID=exon-O5C65_000048-1;Parent=rna-O5C65_000048;anticodon=(pos:complement(43351..43353));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_000048;product=tRNA-Lys DALFDA020000001.1 tpg gene 43391 43466 . - . ID=gene-O5C65_000049;Name=O5C65_000049;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_000049 DALFDA020000001.1 tRNAscan-SE tRNA 43391 43466 . - . ID=rna-O5C65_000049;Parent=gene-O5C65_000049;anticodon=(pos:complement(43431..43433));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_000049;product=tRNA-Val DALFDA020000001.1 tRNAscan-SE exon 43391 43466 . - . ID=exon-O5C65_000049-1;Parent=rna-O5C65_000049;anticodon=(pos:complement(43431..43433));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_000049;product=tRNA-Val DALFDA020000001.1 tpg gene 43510 43585 . - . ID=gene-O5C65_000050;Name=O5C65_000050;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_000050 DALFDA020000001.1 tRNAscan-SE tRNA 43510 43585 . - . ID=rna-O5C65_000050;Parent=gene-O5C65_000050;anticodon=(pos:complement(43550..43552));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_000050;product=tRNA-Val DALFDA020000001.1 tRNAscan-SE exon 43510 43585 . - . ID=exon-O5C65_000050-1;Parent=rna-O5C65_000050;anticodon=(pos:complement(43550..43552));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_000050;product=tRNA-Val DALFDA020000001.1 tpg gene 43631 43706 . - . ID=gene-O5C65_000051;Name=O5C65_000051;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_000051 DALFDA020000001.1 tRNAscan-SE tRNA 43631 43706 . - . ID=rna-O5C65_000051;Parent=gene-O5C65_000051;anticodon=(pos:complement(43671..43673));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_000051;product=tRNA-Val DALFDA020000001.1 tRNAscan-SE exon 43631 43706 . - . ID=exon-O5C65_000051-1;Parent=rna-O5C65_000051;anticodon=(pos:complement(43671..43673));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_000051;product=tRNA-Val DALFDA020000001.1 tpg gene 43965 45380 . + . ID=gene-O5C65_000052;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=O5C65_000052 DALFDA020000001.1 Protein Homology CDS 43965 45380 . + 0 ID=cds-HJH9170244.1;Parent=gene-O5C65_000052;Dbxref=NCBI_GP:HJH9170244.1;Name=HJH9170244.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461354.1;locus_tag=O5C65_000052;product=glutamate--tRNA ligase;protein_id=HJH9170244.1;transl_table=11 DALFDA020000001.1 tpg gene 45434 45826 . - . ID=gene-O5C65_000053;Name=O5C65_000053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000053 DALFDA020000001.1 Protein Homology CDS 45434 45826 . - 0 ID=cds-HJH9170245.1;Parent=gene-O5C65_000053;Dbxref=NCBI_GP:HJH9170245.1;Name=HJH9170245.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461353.1;locus_tag=O5C65_000053;product=MerR family transcriptional regulator;protein_id=HJH9170245.1;transl_table=11 DALFDA020000001.1 tpg gene 45828 46190 . - . ID=gene-O5C65_000054;Name=O5C65_000054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000054 DALFDA020000001.1 Protein Homology CDS 45828 46190 . - 0 ID=cds-HJH9170246.1;Parent=gene-O5C65_000054;Dbxref=NCBI_GP:HJH9170246.1;Name=HJH9170246.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461352.1;locus_tag=O5C65_000054;product=MerR family transcriptional regulator;protein_id=HJH9170246.1;transl_table=11 DALFDA020000001.1 tpg gene 46412 46487 . + . ID=gene-O5C65_000055;Name=O5C65_000055;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_000055 DALFDA020000001.1 tRNAscan-SE tRNA 46412 46487 . + . ID=rna-O5C65_000055;Parent=gene-O5C65_000055;anticodon=(pos:46445..46447);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_000055;product=tRNA-Ala DALFDA020000001.1 tRNAscan-SE exon 46412 46487 . + . ID=exon-O5C65_000055-1;Parent=rna-O5C65_000055;anticodon=(pos:46445..46447);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_000055;product=tRNA-Ala DALFDA020000001.1 tpg gene 46530 46605 . + . ID=gene-O5C65_000056;Name=O5C65_000056;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_000056 DALFDA020000001.1 tRNAscan-SE tRNA 46530 46605 . + . ID=rna-O5C65_000056;Parent=gene-O5C65_000056;anticodon=(pos:46563..46565);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_000056;product=tRNA-Ala DALFDA020000001.1 tRNAscan-SE exon 46530 46605 . + . ID=exon-O5C65_000056-1;Parent=rna-O5C65_000056;anticodon=(pos:46563..46565);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_000056;product=tRNA-Ala DALFDA020000001.1 tpg gene 46796 48985 . + . ID=gene-O5C65_000057;Name=O5C65_000057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000057 DALFDA020000001.1 Protein Homology CDS 46796 48985 . + 0 ID=cds-HJH9170247.1;Parent=gene-O5C65_000057;Dbxref=NCBI_GP:HJH9170247.1;Name=HJH9170247.1;Ontology_term=GO:0000160,GO:0007165,GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461351.1;locus_tag=O5C65_000057;product=EAL domain-containing protein;protein_id=HJH9170247.1;transl_table=11 DALFDA020000001.1 tpg gene 49038 50240 . - . ID=gene-O5C65_000058;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=O5C65_000058 DALFDA020000001.1 Protein Homology CDS 49038 50240 . - 0 ID=cds-HJH9170248.1;Parent=gene-O5C65_000058;Dbxref=NCBI_GP:HJH9170248.1;Name=HJH9170248.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461350.1;locus_tag=O5C65_000058;product=nucleoside permease NupC;protein_id=HJH9170248.1;transl_table=11 DALFDA020000001.1 tpg gene 50546 50590 . + . ID=gene-O5C65_000059;Name=O5C65_000059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000059 DALFDA020000001.1 Protein Homology CDS 50546 50590 . + 0 ID=cds-HJH9170249.1;Parent=gene-O5C65_000059;Dbxref=NCBI_GP:HJH9170249.1;Name=HJH9170249.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049535.1;locus_tag=O5C65_000059;product=hypothetical protein;protein_id=HJH9170249.1;transl_table=11 DALFDA020000001.1 tpg gene 50583 51824 . + . ID=gene-O5C65_000060;Name=O5C65_000060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000060 DALFDA020000001.1 Protein Homology CDS 50583 51824 . + 0 ID=cds-HJH9170250.1;Parent=gene-O5C65_000060;Dbxref=NCBI_GP:HJH9170250.1;Name=HJH9170250.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461349.1;locus_tag=O5C65_000060;product=Nramp family divalent metal transporter;protein_id=HJH9170250.1;transl_table=11 DALFDA020000001.1 tpg gene 51885 52211 . - . ID=gene-O5C65_000061;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=O5C65_000061 DALFDA020000001.1 Protein Homology CDS 51885 52211 . - 0 ID=cds-HJH9170251.1;Parent=gene-O5C65_000061;Dbxref=NCBI_GP:HJH9170251.1;Name=HJH9170251.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461348.1;locus_tag=O5C65_000061;product=DUF2502 domain-containing protein YpeC;protein_id=HJH9170251.1;transl_table=11 DALFDA020000001.1 tpg gene 52325 53323 . - . ID=gene-O5C65_000062;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=O5C65_000062 DALFDA020000001.1 Protein Homology CDS 52325 53323 . - 0 ID=cds-HJH9170252.1;Parent=gene-O5C65_000062;Dbxref=NCBI_GP:HJH9170252.1;Name=HJH9170252.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461347.1;locus_tag=O5C65_000062;product=L-glyceraldehyde 3-phosphate reductase;protein_id=HJH9170252.1;transl_table=11 DALFDA020000001.1 tpg gene 53503 55155 . + . ID=gene-O5C65_000063;Name=O5C65_000063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000063 DALFDA020000001.1 Protein Homology CDS 53503 55155 . + 0 ID=cds-HJH9170253.1;Parent=gene-O5C65_000063;Dbxref=NCBI_GP:HJH9170253.1;Name=HJH9170253.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461346.1;locus_tag=O5C65_000063;product=alpha-keto acid decarboxylase family protein;protein_id=HJH9170253.1;transl_table=11 DALFDA020000001.1 tpg gene 55175 56410 . - . ID=gene-O5C65_000064;Name=O5C65_000064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000064 DALFDA020000001.1 Protein Homology CDS 55175 56410 . - 0 ID=cds-HJH9170254.1;Parent=gene-O5C65_000064;Dbxref=NCBI_GP:HJH9170254.1;Name=HJH9170254.1;Ontology_term=GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461345.1;locus_tag=O5C65_000064;product=ion channel protein;protein_id=HJH9170254.1;transl_table=11 DALFDA020000001.1 tpg gene 56614 57579 . + . ID=gene-O5C65_000065;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=O5C65_000065 DALFDA020000001.1 Protein Homology CDS 56614 57579 . + 0 ID=cds-HJH9170255.1;Parent=gene-O5C65_000065;Dbxref=NCBI_GP:HJH9170255.1;Name=HJH9170255.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,D-glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461344.1;locus_tag=O5C65_000065;product=glucokinase;protein_id=HJH9170255.1;transl_table=11 DALFDA020000001.1 tpg gene 58300 59538 . + . ID=gene-O5C65_000066;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=O5C65_000066 DALFDA020000001.1 Protein Homology CDS 58300 59538 . + 0 ID=cds-HJH9170256.1;Parent=gene-O5C65_000066;Dbxref=NCBI_GP:HJH9170256.1;Name=HJH9170256.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461343.1;locus_tag=O5C65_000066;product=alanine transaminase;protein_id=HJH9170256.1;transl_table=11 DALFDA020000001.1 tpg gene 59588 59659 . - . ID=gene-O5C65_000067;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=O5C65_000067 DALFDA020000001.1 Protein Homology CDS 59588 59659 . - 0 ID=cds-HJH9170257.1;Parent=gene-O5C65_000067;Dbxref=NCBI_GP:HJH9170257.1;Name=HJH9170257.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ypdK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=O5C65_000067;product=membrane protein YpdK;protein_id=HJH9170257.1;transl_table=11 DALFDA020000001.1 tpg gene 60062 60982 . - . ID=gene-O5C65_000068;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=O5C65_000068 DALFDA020000001.1 Protein Homology CDS 60062 60982 . - 0 ID=cds-HJH9170258.1;Parent=gene-O5C65_000068;Dbxref=NCBI_GP:HJH9170258.1;Name=HJH9170258.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461342.1;locus_tag=O5C65_000068;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=HJH9170258.1;transl_table=11 DALFDA020000001.1 tpg gene 61504 61746 . + . ID=gene-O5C65_000069;Name=O5C65_000069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000069 DALFDA020000001.1 Protein Homology CDS 61504 61746 . + 0 ID=cds-HJH9170259.1;Parent=gene-O5C65_000069;Dbxref=NCBI_GP:HJH9170259.1;Name=HJH9170259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461341.1;locus_tag=O5C65_000069;product=YfdY family protein;protein_id=HJH9170259.1;transl_table=11 DALFDA020000001.1 tpg gene 61985 63376 . - . ID=gene-O5C65_000070;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=protein_coding;locus_tag=O5C65_000070 DALFDA020000001.1 Protein Homology CDS 61985 63376 . - 0 ID=cds-HJH9170260.1;Parent=gene-O5C65_000070;Dbxref=NCBI_GP:HJH9170260.1;Name=HJH9170260.1;Ontology_term=GO:0015760,GO:0035435,GO:0061513;gbkey=CDS;gene=pgtP;go_function=glucose 6-phosphate:phosphate antiporter activity|0061513||IEA;go_process=glucose-6-phosphate transport|0015760||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461340.1;locus_tag=O5C65_000070;product=phosphoglycerate transporter PgtP;protein_id=HJH9170260.1;transl_table=11 DALFDA020000001.1 tpg gene 63812 65005 . + . ID=gene-O5C65_000071;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=protein_coding;locus_tag=O5C65_000071 DALFDA020000001.1 Protein Homology CDS 63812 65005 . + 0 ID=cds-HJH9170261.1;Parent=gene-O5C65_000071;Dbxref=NCBI_GP:HJH9170261.1;Name=HJH9170261.1;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461339.1;locus_tag=O5C65_000071;product=phosphoglycerate transport regulator PgtC;protein_id=HJH9170261.1;transl_table=11 DALFDA020000001.1 tpg gene 65002 67008 . + . ID=gene-O5C65_000072;Name=pgtB;gbkey=Gene;gene=pgtB;gene_biotype=protein_coding;locus_tag=O5C65_000072 DALFDA020000001.1 Protein Homology CDS 65002 67008 . + 0 ID=cds-HJH9170262.1;Parent=gene-O5C65_000072;Dbxref=NCBI_GP:HJH9170262.1;Name=HJH9170262.1;Ontology_term=GO:0000160,GO:0000155,GO:0005524;gbkey=CDS;gene=pgtB;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461338.1;locus_tag=O5C65_000072;product=two-component system sensor histidine kinase PgtB;protein_id=HJH9170262.1;transl_table=11 DALFDA020000001.1 tpg gene 66998 68245 . + . ID=gene-O5C65_000073;Name=pgtA;gbkey=Gene;gene=pgtA;gene_biotype=protein_coding;locus_tag=O5C65_000073 DALFDA020000001.1 Protein Homology CDS 66998 68245 . + 0 ID=cds-HJH9170263.1;Parent=gene-O5C65_000073;Dbxref=NCBI_GP:HJH9170263.1;Name=HJH9170263.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;gene=pgtA;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461337.1;locus_tag=O5C65_000073;product=two-component system response regulator PgtA;protein_id=HJH9170263.1;transl_table=11 DALFDA020000001.1 tpg gene 68513 69451 . + . ID=gene-O5C65_000074;Name=pgtE;gbkey=Gene;gene=pgtE;gene_biotype=protein_coding;locus_tag=O5C65_000074 DALFDA020000001.1 Protein Homology CDS 68513 69451 . + 0 ID=cds-HJH9170264.1;Parent=gene-O5C65_000074;Dbxref=NCBI_GP:HJH9170264.1;Name=HJH9170264.1;gbkey=CDS;gene=pgtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461336.1;locus_tag=O5C65_000074;product=omptin family outer membrane protease PgtE;protein_id=HJH9170264.1;transl_table=11 DALFDA020000001.1 tpg gene 69608 69682 . - . ID=gene-O5C65_000075;Name=O5C65_000075;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_000075 DALFDA020000001.1 tRNAscan-SE tRNA 69608 69682 . - . ID=rna-O5C65_000075;Parent=gene-O5C65_000075;anticodon=(pos:complement(69647..69649));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_000075;product=tRNA-Arg DALFDA020000001.1 tRNAscan-SE exon 69608 69682 . - . ID=exon-O5C65_000075-1;Parent=rna-O5C65_000075;anticodon=(pos:complement(69647..69649));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_000075;product=tRNA-Arg DALFDA020000001.1 tpg gene 69758 70699 . - . ID=gene-O5C65_000076;Name=O5C65_000076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000076 DALFDA020000001.1 Protein Homology CDS 69758 70699 . - 0 ID=cds-HJH9170265.1;Parent=gene-O5C65_000076;Dbxref=NCBI_GP:HJH9170265.1;Name=HJH9170265.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461335.1;locus_tag=O5C65_000076;product=formate/nitrite transporter family protein;protein_id=HJH9170265.1;transl_table=11 DALFDA020000001.1 tpg gene 70988 71743 . + . ID=gene-O5C65_000077;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=O5C65_000077 DALFDA020000001.1 Protein Homology CDS 70988 71743 . + 0 ID=cds-HJH9170266.1;Parent=gene-O5C65_000077;Dbxref=NCBI_GP:HJH9170266.1;Name=HJH9170266.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461334.1;locus_tag=O5C65_000077;product=phospholipid-binding lipoprotein MlaA;protein_id=HJH9170266.1;transl_table=11 DALFDA020000001.1 tpg gene 71804 73111 . - . ID=gene-O5C65_000078;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=O5C65_000078 DALFDA020000001.1 Protein Homology CDS 71804 73111 . - 0 ID=cds-HJH9170267.1;Parent=gene-O5C65_000078;Dbxref=NCBI_GP:HJH9170267.1;Name=HJH9170267.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=O5C65_000078;product=long-chain fatty acid transporter FadL;protein_id=HJH9170267.1;transl_table=11 DALFDA020000001.1 tpg gene 73482 73766 . + . ID=gene-O5C65_000079;Name=O5C65_000079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000079 DALFDA020000001.1 Protein Homology CDS 73482 73766 . + 0 ID=cds-HJH9170268.1;Parent=gene-O5C65_000079;Dbxref=NCBI_GP:HJH9170268.1;Name=HJH9170268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=O5C65_000079;product=YfcZ/YiiS family protein;protein_id=HJH9170268.1;transl_table=11 DALFDA020000001.1 tpg gene 73944 75254 . + . ID=gene-O5C65_000080;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=O5C65_000080 DALFDA020000001.1 Protein Homology CDS 73944 75254 . + 0 ID=cds-HJH9170269.1;Parent=gene-O5C65_000080;Dbxref=NCBI_GP:HJH9170269.1;Name=HJH9170269.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadI;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461331.2;locus_tag=O5C65_000080;product=acetyl-CoA C-acyltransferase FadI;protein_id=HJH9170269.1;transl_table=11 DALFDA020000001.1 tpg gene 75254 77401 . + . ID=gene-O5C65_000081;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=O5C65_000081 DALFDA020000001.1 Protein Homology CDS 75254 77401 . + 0 ID=cds-HJH9170270.1;Parent=gene-O5C65_000081;Dbxref=NCBI_GP:HJH9170270.1;Name=HJH9170270.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692,GO:0051287;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,NAD binding|0051287||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461330.1;locus_tag=O5C65_000081;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=HJH9170270.1;transl_table=11 DALFDA020000001.1 tpg gene 77610 78095 . + . ID=gene-O5C65_000082;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=O5C65_000082 DALFDA020000001.1 Protein Homology CDS 77610 78095 . + 0 ID=cds-HJH9170271.1;Parent=gene-O5C65_000082;Dbxref=NCBI_GP:HJH9170271.1;Name=HJH9170271.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461329.1;locus_tag=O5C65_000082;product=phosphohistidine phosphatase SixA;protein_id=HJH9170271.1;transl_table=11 DALFDA020000001.1 tpg gene 78195 78746 . - . ID=gene-O5C65_000083;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=O5C65_000083 DALFDA020000001.1 Protein Homology CDS 78195 78746 . - 0 ID=cds-HJH9170272.1;Parent=gene-O5C65_000083;Dbxref=NCBI_GP:HJH9170272.1;Name=HJH9170272.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461328.1;locus_tag=O5C65_000083;product=endonuclease SmrB;protein_id=HJH9170272.1;transl_table=11 DALFDA020000001.1 tpg gene 78912 79844 . + . ID=gene-O5C65_000084;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=O5C65_000084 DALFDA020000001.1 Protein Homology CDS 78912 79844 . + 0 ID=cds-HJH9170273.1;Parent=gene-O5C65_000084;Dbxref=NCBI_GP:HJH9170273.1;Name=HJH9170273.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=O5C65_000084;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=HJH9170273.1;transl_table=11 DALFDA020000001.1 tpg gene 79880 80965 . + . ID=gene-O5C65_000085;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=O5C65_000085 DALFDA020000001.1 Protein Homology CDS 79880 80965 . + 0 ID=cds-HJH9170274.1;Parent=gene-O5C65_000085;Dbxref=NCBI_GP:HJH9170274.1;Name=HJH9170274.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=O5C65_000085;product=chorismate synthase;protein_id=HJH9170274.1;transl_table=11 DALFDA020000001.1 tpg gene 80969 81793 . + . ID=gene-O5C65_000086;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=O5C65_000086 DALFDA020000001.1 Protein Homology CDS 80969 81793 . + 0 ID=cds-HJH9170275.1;Parent=gene-O5C65_000086;Dbxref=NCBI_GP:HJH9170275.1;Name=HJH9170275.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461325.1;locus_tag=O5C65_000086;product=penicillin-insensitive murein endopeptidase;protein_id=HJH9170275.1;transl_table=11 DALFDA020000001.1 tpg gene 81793 82602 . + . ID=gene-O5C65_000087;Name=O5C65_000087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000087 DALFDA020000001.1 Protein Homology CDS 81793 82602 . + 0 ID=cds-HJH9170276.1;Parent=gene-O5C65_000087;Dbxref=NCBI_GP:HJH9170276.1;Name=HJH9170276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461324.1;locus_tag=O5C65_000087;product=sulfite exporter TauE/SafE family protein;protein_id=HJH9170276.1;transl_table=11 DALFDA020000001.1 tpg gene 82602 83150 . + . ID=gene-O5C65_000088;Name=O5C65_000088;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000088 DALFDA020000001.1 Protein Homology CDS 82602 83150 . + 0 ID=cds-HJH9170277.1;Parent=gene-O5C65_000088;Dbxref=NCBI_GP:HJH9170277.1;Name=HJH9170277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461323.1;locus_tag=O5C65_000088;product=elongation factor P hydroxylase;protein_id=HJH9170277.1;transl_table=11 DALFDA020000001.1 tpg gene 83183 83458 . + . ID=gene-O5C65_000089;Name=O5C65_000089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000089 DALFDA020000001.1 Protein Homology CDS 83183 83458 . + 0 ID=cds-HJH9170278.1;Parent=gene-O5C65_000089;Dbxref=NCBI_GP:HJH9170278.1;Name=HJH9170278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461322.1;locus_tag=O5C65_000089;product=YfcL family protein;protein_id=HJH9170278.1;transl_table=11 DALFDA020000001.1 tpg gene 83510 85510 . - . ID=gene-O5C65_000090;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=O5C65_000090 DALFDA020000001.1 Protein Homology CDS 83510 85510 . - 0 ID=cds-HJH9170279.1;Parent=gene-O5C65_000090;Dbxref=NCBI_GP:HJH9170279.1;Name=HJH9170279.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540542.1;locus_tag=O5C65_000090;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=HJH9170279.1;transl_table=11 DALFDA020000001.1 tpg gene 85670 86884 . + . ID=gene-O5C65_000091;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=O5C65_000091 DALFDA020000001.1 Protein Homology CDS 85670 86884 . + 0 ID=cds-HJH9170280.1;Parent=gene-O5C65_000091;Dbxref=NCBI_GP:HJH9170280.1;Name=HJH9170280.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461320.1;locus_tag=O5C65_000091;product=beta-ketoacyl-ACP synthase I;protein_id=HJH9170280.1;transl_table=11 DALFDA020000001.1 tpg gene 86982 87638 . + . ID=gene-O5C65_000092;Name=O5C65_000092;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000092 DALFDA020000001.1 Protein Homology CDS 86982 87638 . + 0 ID=cds-HJH9170281.1;Parent=gene-O5C65_000092;Dbxref=NCBI_GP:HJH9170281.1;Name=HJH9170281.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461319.1;locus_tag=O5C65_000092;product=CPBP family intramembrane glutamic endopeptidase;protein_id=HJH9170281.1;transl_table=11 DALFDA020000001.1 tpg gene 87705 88223 . - . ID=gene-O5C65_000093;Name=O5C65_000093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000093 DALFDA020000001.1 Protein Homology CDS 87705 88223 . - 0 ID=cds-HJH9170282.1;Parent=gene-O5C65_000093;Dbxref=NCBI_GP:HJH9170282.1;Name=HJH9170282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461318.1;locus_tag=O5C65_000093;product=YbjP/YqhG family protein;protein_id=HJH9170282.1;transl_table=11 DALFDA020000001.1 tpg gene 88223 88591 . - . ID=gene-O5C65_000094;Name=O5C65_000094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000094 DALFDA020000001.1 Protein Homology CDS 88223 88591 . - 0 ID=cds-HJH9170283.1;Parent=gene-O5C65_000094;Dbxref=NCBI_GP:HJH9170283.1;Name=HJH9170283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461317.1;locus_tag=O5C65_000094;product=NlpC/P60 family protein;protein_id=HJH9170283.1;transl_table=11 DALFDA020000001.1 tpg gene 88760 89008 . - . ID=gene-O5C65_000095;Name=O5C65_000095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000095 DALFDA020000001.1 Protein Homology CDS 88760 89008 . - 0 ID=cds-HJH9170284.1;Parent=gene-O5C65_000095;Dbxref=NCBI_GP:HJH9170284.1;Name=HJH9170284.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461316.1;locus_tag=O5C65_000095;product=helix-turn-helix domain-containing protein;protein_id=HJH9170284.1;transl_table=11 DALFDA020000001.1 tpg gene 89181 89555 . + . ID=gene-O5C65_000096;Name=O5C65_000096;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000096 DALFDA020000001.1 Protein Homology CDS 89181 89555 . + 0 ID=cds-HJH9170285.1;Parent=gene-O5C65_000096;Dbxref=NCBI_GP:HJH9170285.1;Name=HJH9170285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461315.1;locus_tag=O5C65_000096;product=hypothetical protein;protein_id=HJH9170285.1;transl_table=11 DALFDA020000001.1 tpg gene 89735 90913 . + . ID=gene-O5C65_000097;Name=O5C65_000097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000097 DALFDA020000001.1 Protein Homology CDS 89735 90913 . + 0 ID=cds-HJH9170286.1;Parent=gene-O5C65_000097;Dbxref=NCBI_GP:HJH9170286.1;Name=HJH9170286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461314.1;locus_tag=O5C65_000097;product=MFS transporter;protein_id=HJH9170286.1;transl_table=11 DALFDA020000001.1 tpg gene 90910 91911 . - . ID=gene-O5C65_000098;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=O5C65_000098 DALFDA020000001.1 Protein Homology CDS 90910 91911 . - 0 ID=cds-HJH9170287.1;Parent=gene-O5C65_000098;Dbxref=NCBI_GP:HJH9170287.1;Name=HJH9170287.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461313.1;locus_tag=O5C65_000098;product=flagella biosynthesis regulator Flk;protein_id=HJH9170287.1;transl_table=11 DALFDA020000001.1 tpg gene 92015 93151 . + . ID=gene-O5C65_000099;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=O5C65_000099 DALFDA020000001.1 Protein Homology CDS 92015 93151 . + 0 ID=cds-HJH9170288.1;Parent=gene-O5C65_000099;Dbxref=NCBI_GP:HJH9170288.1;Name=HJH9170288.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461312.1;locus_tag=O5C65_000099;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=HJH9170288.1;transl_table=11 DALFDA020000001.1 tpg gene 93219 94232 . + . ID=gene-O5C65_000100;Name=O5C65_000100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000100 DALFDA020000001.1 Protein Homology CDS 93219 94232 . + 0 ID=cds-HJH9170289.1;Parent=gene-O5C65_000100;Dbxref=NCBI_GP:HJH9170289.1;Name=HJH9170289.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461311.1;locus_tag=O5C65_000100;product=aspartate-semialdehyde dehydrogenase;protein_id=HJH9170289.1;transl_table=11 DALFDA020000001.1 tpg gene 94232 95044 . + . ID=gene-O5C65_000101;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=O5C65_000101 DALFDA020000001.1 Protein Homology CDS 94232 95044 . + 0 ID=cds-HJH9170290.1;Parent=gene-O5C65_000101;Dbxref=NCBI_GP:HJH9170290.1;Name=HJH9170290.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461310.1;locus_tag=O5C65_000101;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=HJH9170290.1;transl_table=11 DALFDA020000001.1 tpg gene 95093 95752 . + . ID=gene-O5C65_000102;Name=O5C65_000102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000102 DALFDA020000001.1 Protein Homology CDS 95093 95752 . + 0 ID=cds-HJH9170291.1;Parent=gene-O5C65_000102;Dbxref=NCBI_GP:HJH9170291.1;Name=HJH9170291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461309.1;locus_tag=O5C65_000102;product=DedA family protein;protein_id=HJH9170291.1;transl_table=11 DALFDA020000001.1 tpg gene 95902 96816 . + . ID=gene-O5C65_000103;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=O5C65_000103 DALFDA020000001.1 Protein Homology CDS 95902 96816 . + 0 ID=cds-HJH9170292.1;Parent=gene-O5C65_000103;Dbxref=NCBI_GP:HJH9170292.1;Name=HJH9170292.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461308.1;locus_tag=O5C65_000103;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=HJH9170292.1;transl_table=11 DALFDA020000001.1 tpg gene 96884 98152 . + . ID=gene-O5C65_000104;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=O5C65_000104 DALFDA020000001.1 Protein Homology CDS 96884 98152 . + 0 ID=cds-HJH9170293.1;Parent=gene-O5C65_000104;Dbxref=NCBI_GP:HJH9170293.1;Name=HJH9170293.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461307.1;locus_tag=O5C65_000104;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=HJH9170293.1;transl_table=11 DALFDA020000001.1 tpg gene 98142 98816 . + . ID=gene-O5C65_000105;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=O5C65_000105 DALFDA020000001.1 Protein Homology CDS 98142 98816 . + 0 ID=cds-HJH9170294.1;Parent=gene-O5C65_000105;Dbxref=NCBI_GP:HJH9170294.1;Name=HJH9170294.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461306.1;locus_tag=O5C65_000105;product=cell division protein DedD;protein_id=HJH9170294.1;transl_table=11 DALFDA020000001.1 tpg gene 99127 99615 . + . ID=gene-O5C65_000106;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=O5C65_000106 DALFDA020000001.1 Protein Homology CDS 99127 99615 . + 0 ID=cds-HJH9170295.1;Parent=gene-O5C65_000106;Dbxref=NCBI_GP:HJH9170295.1;Name=HJH9170295.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461305.1;locus_tag=O5C65_000106;product=colicin V production protein;protein_id=HJH9170295.1;transl_table=11 DALFDA020000001.1 tpg gene 99653 101170 . + . ID=gene-O5C65_000107;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=O5C65_000107 DALFDA020000001.1 Protein Homology CDS 99653 101170 . + 0 ID=cds-HJH9170296.1;Parent=gene-O5C65_000107;Dbxref=NCBI_GP:HJH9170296.1;Name=HJH9170296.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=O5C65_000107;product=amidophosphoribosyltransferase;protein_id=HJH9170296.1;transl_table=11 DALFDA020000001.1 tpg gene 101206 102633 . - . ID=gene-O5C65_000108;Name=O5C65_000108;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000108 DALFDA020000001.1 Protein Homology CDS 101206 102633 . - 0 ID=cds-HJH9170297.1;Parent=gene-O5C65_000108;Dbxref=NCBI_GP:HJH9170297.1;Name=HJH9170297.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461303.1;locus_tag=O5C65_000108;product=sigma-54 interaction domain-containing protein;protein_id=HJH9170297.1;transl_table=11 DALFDA020000001.1 tpg gene 102844 104241 . + . ID=gene-O5C65_000109;Name=O5C65_000109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000109 DALFDA020000001.1 Protein Homology CDS 102844 104241 . + 0 ID=cds-HJH9170298.1;Parent=gene-O5C65_000109;Dbxref=NCBI_GP:HJH9170298.1;Name=HJH9170298.1;Ontology_term=GO:0016831,GO:0030170;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461302.1;locus_tag=O5C65_000109;product=diaminopimelate decarboxylase family protein;protein_id=HJH9170298.1;transl_table=11 DALFDA020000001.1 tpg gene 104332 105753 . + . ID=gene-O5C65_000110;Name=O5C65_000110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000110 DALFDA020000001.1 Protein Homology CDS 104332 105753 . + 0 ID=cds-HJH9170299.1;Parent=gene-O5C65_000110;Dbxref=NCBI_GP:HJH9170299.1;Name=HJH9170299.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461301.1;locus_tag=O5C65_000110;product=APC family permease;protein_id=HJH9170299.1;transl_table=11 DALFDA020000001.1 tpg gene 105755 106858 . + . ID=gene-O5C65_000111;Name=O5C65_000111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000111 DALFDA020000001.1 Protein Homology CDS 105755 106858 . + 0 ID=cds-HJH9170300.1;Parent=gene-O5C65_000111;Dbxref=NCBI_GP:HJH9170300.1;Name=HJH9170300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461300.1;locus_tag=O5C65_000111;product=alanine/ornithine racemase family PLP-dependent enzyme;protein_id=HJH9170300.1;transl_table=11 DALFDA020000001.1 tpg gene 106922 108328 . + . ID=gene-O5C65_000112;Name=O5C65_000112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000112 DALFDA020000001.1 Protein Homology CDS 106922 108328 . + 0 ID=cds-HJH9170301.1;Parent=gene-O5C65_000112;Dbxref=NCBI_GP:HJH9170301.1;Name=HJH9170301.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461299.1;locus_tag=O5C65_000112;product=amino acid permease;protein_id=HJH9170301.1;transl_table=11 DALFDA020000001.1 tpg gene 108355 108924 . + . ID=gene-O5C65_000113;Name=O5C65_000113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000113 DALFDA020000001.1 Protein Homology CDS 108355 108924 . + 0 ID=cds-HJH9170302.1;Parent=gene-O5C65_000113;Dbxref=NCBI_GP:HJH9170302.1;Name=HJH9170302.1;Ontology_term=GO:0010181,GO:0016831,GO:0106141;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,flavin prenyltransferase activity|0106141||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461298.1;locus_tag=O5C65_000113;product=UbiX family flavin prenyltransferase;protein_id=HJH9170302.1;transl_table=11 DALFDA020000001.1 tpg gene 109213 109995 . + . ID=gene-O5C65_000114;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=O5C65_000114 DALFDA020000001.1 Protein Homology CDS 109213 109995 . + 0 ID=cds-HJH9170303.1;Parent=gene-O5C65_000114;Dbxref=NCBI_GP:HJH9170303.1;Name=HJH9170303.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461297.1;locus_tag=O5C65_000114;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=HJH9170303.1;transl_table=11 DALFDA020000001.1 tpg gene 110233 111015 . + . ID=gene-O5C65_000115;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=O5C65_000115 DALFDA020000001.1 Protein Homology CDS 110233 111015 . + 0 ID=cds-HJH9170304.1;Parent=gene-O5C65_000115;Dbxref=NCBI_GP:HJH9170304.1;Name=HJH9170304.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461296.1;locus_tag=O5C65_000115;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=HJH9170304.1;transl_table=11 DALFDA020000001.1 tpg gene 111198 111884 . + . ID=gene-O5C65_000116;Name=O5C65_000116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000116 DALFDA020000001.1 Protein Homology CDS 111198 111884 . + 0 ID=cds-HJH9170305.1;Parent=gene-O5C65_000116;Dbxref=NCBI_GP:HJH9170305.1;Name=HJH9170305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=O5C65_000116;product=histidine ABC transporter permease HisQ;protein_id=HJH9170305.1;transl_table=11 DALFDA020000001.1 tpg gene 111881 112588 . + . ID=gene-O5C65_000117;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=O5C65_000117 DALFDA020000001.1 Protein Homology CDS 111881 112588 . + 0 ID=cds-HJH9170306.1;Parent=gene-O5C65_000117;Dbxref=NCBI_GP:HJH9170306.1;Name=HJH9170306.1;gbkey=CDS;gene=hisM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461294.1;locus_tag=O5C65_000117;product=histidine ABC transporter permease HisM;protein_id=HJH9170306.1;transl_table=11 DALFDA020000001.1 tpg gene 112602 113375 . + . ID=gene-O5C65_000118;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=O5C65_000118 DALFDA020000001.1 Protein Homology CDS 112602 113375 . + 0 ID=cds-HJH9170307.1;Parent=gene-O5C65_000118;Dbxref=NCBI_GP:HJH9170307.1;Name=HJH9170307.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=O5C65_000118;product=histidine ABC transporter ATP-binding protein HisP;protein_id=HJH9170307.1;transl_table=11 DALFDA020000001.1 tpg gene 113427 114320 . - . ID=gene-O5C65_000119;Name=O5C65_000119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000119 DALFDA020000001.1 Protein Homology CDS 113427 114320 . - 0 ID=cds-HJH9170308.1;Parent=gene-O5C65_000119;Dbxref=NCBI_GP:HJH9170308.1;Name=HJH9170308.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461292.1;locus_tag=O5C65_000119;product=TIGR01777 family oxidoreductase;protein_id=HJH9170308.1;transl_table=11 DALFDA020000001.1 tpg gene 114446 115093 . - . ID=gene-O5C65_000120;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=O5C65_000120 DALFDA020000001.1 Protein Homology CDS 114446 115093 . - 0 ID=cds-HJH9170309.1;Parent=gene-O5C65_000120;Dbxref=NCBI_GP:HJH9170309.1;Name=HJH9170309.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461291.1;locus_tag=O5C65_000120;product=GSH-dependent disulfide bond oxidoreductase;protein_id=HJH9170309.1;transl_table=11 DALFDA020000001.1 tpg gene 115236 115880 . + . ID=gene-O5C65_000121;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=O5C65_000121 DALFDA020000001.1 Protein Homology CDS 115236 115880 . + 0 ID=cds-HJH9170310.1;Parent=gene-O5C65_000121;Dbxref=NCBI_GP:HJH9170310.1;Name=HJH9170310.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461290.1;locus_tag=O5C65_000121;product=glutathione transferase;protein_id=HJH9170310.1;transl_table=11 DALFDA020000001.1 tpg gene 115936 116487 . + . ID=gene-O5C65_000122;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=O5C65_000122 DALFDA020000001.1 Protein Homology CDS 115936 116487 . + 0 ID=cds-HJH9170311.1;Parent=gene-O5C65_000122;Dbxref=NCBI_GP:HJH9170311.1;Name=HJH9170311.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461289.1;locus_tag=O5C65_000122;product=phosphodiesterase;protein_id=HJH9170311.1;transl_table=11 DALFDA020000001.1 tpg gene 116544 117098 . + . ID=gene-O5C65_000123;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=O5C65_000123 DALFDA020000001.1 Protein Homology CDS 116544 117098 . + 0 ID=cds-HJH9170312.1;Parent=gene-O5C65_000123;Dbxref=NCBI_GP:HJH9170312.1;Name=HJH9170312.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461288.1;locus_tag=O5C65_000123;product=NUDIX hydrolase YfcD;protein_id=HJH9170312.1;transl_table=11 DALFDA020000001.1 tpg gene 117104 118123 . - . ID=gene-O5C65_000124;Name=O5C65_000124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000124 DALFDA020000001.1 Protein Homology CDS 117104 118123 . - 0 ID=cds-HJH9170313.1;Parent=gene-O5C65_000124;Dbxref=NCBI_GP:HJH9170313.1;Name=HJH9170313.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461287.1;locus_tag=O5C65_000124;product=LacI family DNA-binding transcriptional regulator;protein_id=HJH9170313.1;transl_table=11 DALFDA020000001.1 tpg gene 118376 118819 . + . ID=gene-O5C65_000125;Name=O5C65_000125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000125 DALFDA020000001.1 Protein Homology CDS 118376 118819 . + 0 ID=cds-HJH9170314.1;Parent=gene-O5C65_000125;Dbxref=NCBI_GP:HJH9170314.1;Name=HJH9170314.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461286.1;locus_tag=O5C65_000125;product=PTS sugar transporter subunit IIA;protein_id=HJH9170314.1;transl_table=11 DALFDA020000001.1 tpg gene 118900 119172 . + . ID=gene-O5C65_000126;Name=O5C65_000126;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000126 DALFDA020000001.1 Protein Homology CDS 118900 119172 . + 0 ID=cds-HJH9170315.1;Parent=gene-O5C65_000126;Dbxref=NCBI_GP:HJH9170315.1;Name=HJH9170315.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461285.1;locus_tag=O5C65_000126;product=PTS sugar transporter subunit IIB;protein_id=HJH9170315.1;transl_table=11 DALFDA020000001.1 tpg gene 119193 120584 . + . ID=gene-O5C65_000127;Name=O5C65_000127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000127 DALFDA020000001.1 Protein Homology CDS 119193 120584 . + 0 ID=cds-HJH9170316.1;Parent=gene-O5C65_000127;Dbxref=NCBI_GP:HJH9170316.1;Name=HJH9170316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461284.3;locus_tag=O5C65_000127;product=PTS ascorbate transporter subunit IIC;protein_id=HJH9170316.1;transl_table=11 DALFDA020000001.1 tpg gene 120581 121411 . + . ID=gene-O5C65_000128;Name=O5C65_000128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000128 DALFDA020000001.1 Protein Homology CDS 120581 121411 . + 0 ID=cds-HJH9170317.1;Parent=gene-O5C65_000128;Dbxref=NCBI_GP:HJH9170317.1;Name=HJH9170317.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461283.1;locus_tag=O5C65_000128;product=transketolase;protein_id=HJH9170317.1;transl_table=11 DALFDA020000001.1 tpg gene 121404 122357 . + . ID=gene-O5C65_000129;Name=O5C65_000129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000129 DALFDA020000001.1 Protein Homology CDS 121404 122357 . + 0 ID=cds-HJH9170318.1;Parent=gene-O5C65_000129;Dbxref=NCBI_GP:HJH9170318.1;Name=HJH9170318.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461282.1;locus_tag=O5C65_000129;product=transketolase family protein;protein_id=HJH9170318.1;transl_table=11 DALFDA020000001.1 tpg gene 122406 123926 . - . ID=gene-O5C65_000130;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=O5C65_000130 DALFDA020000001.1 Protein Homology CDS 122406 123926 . - 0 ID=cds-HJH9170319.1;Parent=gene-O5C65_000130;Dbxref=NCBI_GP:HJH9170319.1;Name=HJH9170319.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461281.1;locus_tag=O5C65_000130;product=putative basic amino acid antiporter YfcC;protein_id=HJH9170319.1;transl_table=11 DALFDA020000001.1 tpg gene 124144 126288 . - . ID=gene-O5C65_000131;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=O5C65_000131 DALFDA020000001.1 Protein Homology CDS 124144 126288 . - 0 ID=cds-HJH9170320.1;Parent=gene-O5C65_000131;Dbxref=NCBI_GP:HJH9170320.1;Name=HJH9170320.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461280.1;locus_tag=O5C65_000131;product=phosphate acetyltransferase;protein_id=HJH9170320.1;transl_table=11 DALFDA020000001.1 tpg gene 126365 127567 . - . ID=gene-O5C65_000132;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=O5C65_000132 DALFDA020000001.1 Protein Homology CDS 126365 127567 . - 0 ID=cds-HJH9170321.1;Parent=gene-O5C65_000132;Dbxref=NCBI_GP:HJH9170321.1;Name=HJH9170321.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=O5C65_000132;product=acetate kinase;protein_id=HJH9170321.1;transl_table=11 DALFDA020000001.1 tpg gene 127907 128362 . + . ID=gene-O5C65_000133;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=O5C65_000133 DALFDA020000001.1 Protein Homology CDS 127907 128362 . + 0 ID=cds-HJH9170322.1;Parent=gene-O5C65_000133;Dbxref=NCBI_GP:HJH9170322.1;Name=HJH9170322.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=O5C65_000133;product=terminus macrodomain insulation protein YfbV;protein_id=HJH9170322.1;transl_table=11 DALFDA020000001.1 tpg gene 128445 128939 . + . ID=gene-O5C65_000134;Name=O5C65_000134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000134 DALFDA020000001.1 Protein Homology CDS 128445 128939 . + 0 ID=cds-HJH9170323.1;Parent=gene-O5C65_000134;Dbxref=NCBI_GP:HJH9170323.1;Name=HJH9170323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=O5C65_000134;product=YfbU family protein;protein_id=HJH9170323.1;transl_table=11 DALFDA020000001.1 tpg gene 128932 129609 . + . ID=gene-O5C65_000135;Name=O5C65_000135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000135 DALFDA020000001.1 Protein Homology CDS 128932 129609 . + 0 ID=cds-HJH9170324.1;Parent=gene-O5C65_000135;Dbxref=NCBI_GP:HJH9170324.1;Name=HJH9170324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461276.3;locus_tag=O5C65_000135;product=sugar phosphatase;protein_id=HJH9170324.1;transl_table=11 DALFDA020000001.1 tpg gene 129686 131512 . + . ID=gene-O5C65_000136;Name=O5C65_000136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000136 DALFDA020000001.1 Protein Homology CDS 129686 131512 . + 0 ID=cds-HJH9170325.1;Parent=gene-O5C65_000136;Dbxref=NCBI_GP:HJH9170325.1;Name=HJH9170325.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461275.1;locus_tag=O5C65_000136;product=SLC13 family permease;protein_id=HJH9170325.1;transl_table=11 DALFDA020000001.1 tpg gene 131603 132202 . - . ID=gene-O5C65_000137;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=O5C65_000137 DALFDA020000001.1 Protein Homology CDS 131603 132202 . - 0 ID=cds-HJH9170326.1;Parent=gene-O5C65_000137;Dbxref=NCBI_GP:HJH9170326.1;Name=HJH9170326.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461274.1;locus_tag=O5C65_000137;product=5'-deoxynucleotidase;protein_id=HJH9170326.1;transl_table=11 DALFDA020000001.1 tpg gene 132296 133510 . - . ID=gene-O5C65_000138;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=O5C65_000138 DALFDA020000001.1 Protein Homology CDS 132296 133510 . - 0 ID=cds-HJH9170327.1;Parent=gene-O5C65_000138;Dbxref=NCBI_GP:HJH9170327.1;Name=HJH9170327.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461273.1;locus_tag=O5C65_000138;product=alanine transaminase AlaA;protein_id=HJH9170327.1;transl_table=11 DALFDA020000001.1 tpg gene 134442 135380 . + . ID=gene-O5C65_000139;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=O5C65_000139 DALFDA020000001.1 Protein Homology CDS 134442 135380 . + 0 ID=cds-HJH9170328.1;Parent=gene-O5C65_000139;Dbxref=NCBI_GP:HJH9170328.1;Name=HJH9170328.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461272.1;locus_tag=O5C65_000139;product=transcriptional regulator LrhA;protein_id=HJH9170328.1;transl_table=11 DALFDA020000001.1 tpg gene 135460 135612 . + . ID=gene-O5C65_000140;Name=O5C65_000140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000140 DALFDA020000001.1 Protein Homology CDS 135460 135612 . + 0 ID=cds-HJH9170329.1;Parent=gene-O5C65_000140;Dbxref=NCBI_GP:HJH9170329.1;Name=HJH9170329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461271.1;locus_tag=O5C65_000140;product=STM2329 family putative cytoplasmic protein;protein_id=HJH9170329.1;transl_table=11 DALFDA020000001.1 tpg gene 136009 136452 . + . ID=gene-O5C65_000141;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=O5C65_000141 DALFDA020000001.1 Protein Homology CDS 136009 136452 . + 0 ID=cds-HJH9170330.1;Parent=gene-O5C65_000141;Dbxref=NCBI_GP:HJH9170330.1;Name=HJH9170330.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461270.1;locus_tag=O5C65_000141;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=HJH9170330.1;transl_table=11 DALFDA020000001.1 tpg gene 136468 137130 . + . ID=gene-O5C65_000142;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=O5C65_000142 DALFDA020000001.1 Protein Homology CDS 136468 137130 . + 0 ID=cds-HJH9170331.1;Parent=gene-O5C65_000142;Dbxref=NCBI_GP:HJH9170331.1;Name=HJH9170331.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461269.1;locus_tag=O5C65_000142;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=HJH9170331.1;transl_table=11 DALFDA020000001.1 tpg gene 137217 139019 . + . ID=gene-O5C65_000143;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=O5C65_000143 DALFDA020000001.1 Protein Homology CDS 137217 139019 . + 0 ID=cds-HJH9170332.1;Parent=gene-O5C65_000143;Dbxref=NCBI_GP:HJH9170332.1;Name=HJH9170332.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461268.1;locus_tag=O5C65_000143;product=NADH-quinone oxidoreductase subunit C/D;protein_id=HJH9170332.1;transl_table=11 DALFDA020000001.1 tpg gene 139022 139522 . + . ID=gene-O5C65_000144;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=O5C65_000144 DALFDA020000001.1 Protein Homology CDS 139022 139522 . + 0 ID=cds-HJH9170333.1;Parent=gene-O5C65_000144;Dbxref=NCBI_GP:HJH9170333.1;Name=HJH9170333.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461267.1;locus_tag=O5C65_000144;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=HJH9170333.1;transl_table=11 DALFDA020000001.1 tpg gene 139519 140856 . + . ID=gene-O5C65_000145;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=O5C65_000145 DALFDA020000001.1 Protein Homology CDS 139519 140856 . + 0 ID=cds-HJH9170334.1;Parent=gene-O5C65_000145;Dbxref=NCBI_GP:HJH9170334.1;Name=HJH9170334.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461266.1;locus_tag=O5C65_000145;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=HJH9170334.1;transl_table=11 DALFDA020000001.1 tpg gene 140937 143663 . + . ID=gene-O5C65_000146;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=O5C65_000146 DALFDA020000001.1 Protein Homology CDS 140937 143663 . + 0 ID=cds-HJH9170335.1;Parent=gene-O5C65_000146;Dbxref=NCBI_GP:HJH9170335.1;Name=HJH9170335.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=O5C65_000146;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=HJH9170335.1;transl_table=11 DALFDA020000001.1 tpg gene 143660 144637 . + . ID=gene-O5C65_000147;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=O5C65_000147 DALFDA020000001.1 Protein Homology CDS 143660 144637 . + 0 ID=cds-HJH9170336.1;Parent=gene-O5C65_000147;Dbxref=NCBI_GP:HJH9170336.1;Name=HJH9170336.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=O5C65_000147;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=HJH9170336.1;transl_table=11 DALFDA020000001.1 tpg gene 144652 145194 . + . ID=gene-O5C65_000148;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=O5C65_000148 DALFDA020000001.1 Protein Homology CDS 144652 145194 . + 0 ID=cds-HJH9170337.1;Parent=gene-O5C65_000148;Dbxref=NCBI_GP:HJH9170337.1;Name=HJH9170337.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=O5C65_000148;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=HJH9170337.1;transl_table=11 DALFDA020000001.1 tpg gene 145205 145759 . + . ID=gene-O5C65_000149;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=O5C65_000149 DALFDA020000001.1 Protein Homology CDS 145205 145759 . + 0 ID=cds-HJH9170338.1;Parent=gene-O5C65_000149;Dbxref=NCBI_GP:HJH9170338.1;Name=HJH9170338.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461262.1;locus_tag=O5C65_000149;product=NADH-quinone oxidoreductase subunit J;protein_id=HJH9170338.1;transl_table=11 DALFDA020000001.1 tpg gene 145756 146058 . + . ID=gene-O5C65_000150;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=O5C65_000150 DALFDA020000001.1 Protein Homology CDS 145756 146058 . + 0 ID=cds-HJH9170339.1;Parent=gene-O5C65_000150;Dbxref=NCBI_GP:HJH9170339.1;Name=HJH9170339.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=O5C65_000150;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=HJH9170339.1;transl_table=11 DALFDA020000001.1 tpg gene 146055 147896 . + . ID=gene-O5C65_000151;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=O5C65_000151 DALFDA020000001.1 Protein Homology CDS 146055 147896 . + 0 ID=cds-HJH9170340.1;Parent=gene-O5C65_000151;Dbxref=NCBI_GP:HJH9170340.1;Name=HJH9170340.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=O5C65_000151;product=NADH-quinone oxidoreductase subunit L;protein_id=HJH9170340.1;transl_table=11 DALFDA020000001.1 tpg gene 148210 149739 . + . ID=gene-O5C65_000152;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=O5C65_000152 DALFDA020000001.1 Protein Homology CDS 148210 149739 . + 0 ID=cds-HJH9170341.1;Parent=gene-O5C65_000152;Dbxref=NCBI_GP:HJH9170341.1;Name=HJH9170341.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=O5C65_000152;product=NADH-quinone oxidoreductase subunit M;protein_id=HJH9170341.1;transl_table=11 DALFDA020000001.1 tpg gene 149746 151203 . + . ID=gene-O5C65_000153;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=O5C65_000153 DALFDA020000001.1 Protein Homology CDS 149746 151203 . + 0 ID=cds-HJH9170342.1;Parent=gene-O5C65_000153;Dbxref=NCBI_GP:HJH9170342.1;Name=HJH9170342.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=O5C65_000153;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=HJH9170342.1;transl_table=11 DALFDA020000001.1 tpg gene 151812 157904 . + . ID=gene-O5C65_000154;Name=O5C65_000154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000154 DALFDA020000001.1 Protein Homology CDS 151812 157904 . + 0 ID=cds-HJH9170343.1;Parent=gene-O5C65_000154;Dbxref=NCBI_GP:HJH9170343.1;Name=HJH9170343.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044774.1;locus_tag=O5C65_000154;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=HJH9170343.1;transl_table=11 DALFDA020000001.1 tpg gene 158607 160397 . + . ID=gene-O5C65_000155;Name=O5C65_000155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000155 DALFDA020000001.1 Protein Homology CDS 158607 160397 . + 0 ID=cds-HJH9170344.1;Parent=gene-O5C65_000155;Dbxref=NCBI_GP:HJH9170344.1;Name=HJH9170344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461257.1;locus_tag=O5C65_000155;product=vWA domain-containing protein;protein_id=HJH9170344.1;transl_table=11 DALFDA020000001.1 tpg gene 160438 161439 . - . ID=gene-O5C65_000156;Name=O5C65_000156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000156 DALFDA020000001.1 Protein Homology CDS 160438 161439 . - 0 ID=cds-HJH9170345.1;Parent=gene-O5C65_000156;Dbxref=NCBI_GP:HJH9170345.1;Name=HJH9170345.1;Ontology_term=GO:0000160,GO:0006935,GO:0000156;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461256.1;locus_tag=O5C65_000156;product=chemotaxis protein;protein_id=HJH9170345.1;transl_table=11 DALFDA020000001.1 tpg gene 161505 162422 . - . ID=gene-O5C65_000157;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=O5C65_000157 DALFDA020000001.1 Protein Homology CDS 161505 162422 . - 0 ID=cds-HJH9170346.1;Parent=gene-O5C65_000157;Dbxref=NCBI_GP:HJH9170346.1;Name=HJH9170346.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rbn;go_function=RNA endonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461255.1;locus_tag=O5C65_000157;product=ribonuclease BN;protein_id=HJH9170346.1;transl_table=11 DALFDA020000001.1 tpg gene 162483 162944 . + . ID=gene-O5C65_000158;Name=O5C65_000158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000158 DALFDA020000001.1 Protein Homology CDS 162483 162944 . + 0 ID=cds-HJH9170347.1;Parent=gene-O5C65_000158;Dbxref=NCBI_GP:HJH9170347.1;Name=HJH9170347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461254.1;locus_tag=O5C65_000158;product=GNAT family N-acetyltransferase;protein_id=HJH9170347.1;transl_table=11 DALFDA020000001.1 tpg gene 162999 163304 . + . ID=gene-O5C65_000159;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=O5C65_000159 DALFDA020000001.1 Protein Homology CDS 162999 163304 . + 0 ID=cds-HJH9170348.1;Parent=gene-O5C65_000159;Dbxref=NCBI_GP:HJH9170348.1;Name=HJH9170348.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=O5C65_000159;product=stress response protein ElaB;protein_id=HJH9170348.1;transl_table=11 DALFDA020000001.1 tpg gene 163405 164700 . + . ID=gene-O5C65_000160;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=O5C65_000160 DALFDA020000001.1 Protein Homology CDS 163405 164700 . + 0 ID=cds-HJH9170349.1;Parent=gene-O5C65_000160;Dbxref=NCBI_GP:HJH9170349.1;Name=HJH9170349.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461252.1;locus_tag=O5C65_000160;product=isochorismate synthase MenF;protein_id=HJH9170349.1;transl_table=11 DALFDA020000001.1 tpg gene 164786 166456 . + . ID=gene-O5C65_000161;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=O5C65_000161 DALFDA020000001.1 Protein Homology CDS 164786 166456 . + 0 ID=cds-HJH9170350.1;Parent=gene-O5C65_000161;Dbxref=NCBI_GP:HJH9170350.1;Name=HJH9170350.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461251.1;locus_tag=O5C65_000161;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=HJH9170350.1;transl_table=11 DALFDA020000001.1 tpg gene 166453 167211 . + . ID=gene-O5C65_000162;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=O5C65_000162 DALFDA020000001.1 Protein Homology CDS 166453 167211 . + 0 ID=cds-HJH9170351.1;Parent=gene-O5C65_000162;Dbxref=NCBI_GP:HJH9170351.1;Name=HJH9170351.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461250.1;locus_tag=O5C65_000162;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=HJH9170351.1;transl_table=11 DALFDA020000001.1 tpg gene 167226 168083 . + . ID=gene-O5C65_000163;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=O5C65_000163 DALFDA020000001.1 Protein Homology CDS 167226 168083 . + 0 ID=cds-HJH9170352.1;Parent=gene-O5C65_000163;Dbxref=NCBI_GP:HJH9170352.1;Name=HJH9170352.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=O5C65_000163;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=HJH9170352.1;transl_table=11 DALFDA020000001.1 tpg gene 168083 169045 . + . ID=gene-O5C65_000164;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=O5C65_000164 DALFDA020000001.1 Protein Homology CDS 168083 169045 . + 0 ID=cds-HJH9170353.1;Parent=gene-O5C65_000164;Dbxref=NCBI_GP:HJH9170353.1;Name=HJH9170353.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461248.1;locus_tag=O5C65_000164;product=o-succinylbenzoate synthase;protein_id=HJH9170353.1;transl_table=11 DALFDA020000001.1 tpg gene 169042 170409 . + . ID=gene-O5C65_000165;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=O5C65_000165 DALFDA020000001.1 Protein Homology CDS 169042 170409 . + 0 ID=cds-HJH9170354.1;Parent=gene-O5C65_000165;Dbxref=NCBI_GP:HJH9170354.1;Name=HJH9170354.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461247.1;locus_tag=O5C65_000165;product=o-succinylbenzoate--CoA ligase;protein_id=HJH9170354.1;transl_table=11 DALFDA020000001.1 tpg gene 170507 170764 . + . ID=gene-O5C65_000166;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=O5C65_000166 DALFDA020000001.1 Protein Homology CDS 170507 170764 . + 0 ID=cds-HJH9170355.1;Parent=gene-O5C65_000166;Dbxref=NCBI_GP:HJH9170355.1;Name=HJH9170355.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461246.1;locus_tag=O5C65_000166;product=signal transduction protein PmrD;protein_id=HJH9170355.1;transl_table=11 DALFDA020000001.1 tpg gene 170759 171136 . - . ID=gene-O5C65_000167;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=O5C65_000167 DALFDA020000001.1 Protein Homology CDS 170759 171136 . - 0 ID=cds-HJH9170356.1;Parent=gene-O5C65_000167;Dbxref=NCBI_GP:HJH9170356.1;Name=HJH9170356.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461245.1;locus_tag=O5C65_000167;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=HJH9170356.1;transl_table=11 DALFDA020000001.1 tpg gene 171136 171471 . - . ID=gene-O5C65_000168;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=O5C65_000168 DALFDA020000001.1 Protein Homology CDS 171136 171471 . - 0 ID=cds-HJH9170357.1;Parent=gene-O5C65_000168;Dbxref=NCBI_GP:HJH9170357.1;Name=HJH9170357.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461244.1;locus_tag=O5C65_000168;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=HJH9170357.1;transl_table=11 DALFDA020000001.1 tpg gene 171468 173114 . - . ID=gene-O5C65_000169;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=O5C65_000169 DALFDA020000001.1 Protein Homology CDS 171468 173114 . - 0 ID=cds-HJH9170358.1;Parent=gene-O5C65_000169;Dbxref=NCBI_GP:HJH9170358.1;Name=HJH9170358.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461243.1;locus_tag=O5C65_000169;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=HJH9170358.1;transl_table=11 DALFDA020000001.1 tpg gene 173111 174010 . - . ID=gene-O5C65_000170;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=O5C65_000170 DALFDA020000001.1 Protein Homology CDS 173111 174010 . - 0 ID=cds-HJH9170359.1;Parent=gene-O5C65_000170;Dbxref=NCBI_GP:HJH9170359.1;Name=HJH9170359.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461242.1;locus_tag=O5C65_000170;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=HJH9170359.1;transl_table=11 DALFDA020000001.1 tpg gene 174007 175989 . - . ID=gene-O5C65_000171;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=O5C65_000171 DALFDA020000001.1 Protein Homology CDS 174007 175989 . - 0 ID=cds-HJH9170360.1;Parent=gene-O5C65_000171;Dbxref=NCBI_GP:HJH9170360.1;Name=HJH9170360.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461241.1;locus_tag=O5C65_000171;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=HJH9170360.1;transl_table=11 DALFDA020000001.1 tpg gene 175986 176969 . - . ID=gene-O5C65_000172;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=O5C65_000172 DALFDA020000001.1 Protein Homology CDS 175986 176969 . - 0 ID=cds-HJH9170361.1;Parent=gene-O5C65_000172;Dbxref=NCBI_GP:HJH9170361.1;Name=HJH9170361.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461240.1;locus_tag=O5C65_000172;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=HJH9170361.1;transl_table=11 DALFDA020000001.1 tpg gene 176972 178111 . - . ID=gene-O5C65_000173;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=O5C65_000173 DALFDA020000001.1 Protein Homology CDS 176972 178111 . - 0 ID=cds-HJH9170362.1;Parent=gene-O5C65_000173;Dbxref=NCBI_GP:HJH9170362.1;Name=HJH9170362.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=O5C65_000173;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=HJH9170362.1;transl_table=11 DALFDA020000001.1 tpg gene 178410 179015 . + . ID=gene-O5C65_000174;Name=pmrG;gbkey=Gene;gene=pmrG;gene_biotype=protein_coding;locus_tag=O5C65_000174 DALFDA020000001.1 Protein Homology CDS 178410 179015 . + 0 ID=cds-HJH9170363.1;Parent=gene-O5C65_000174;Dbxref=NCBI_GP:HJH9170363.1;Name=HJH9170363.1;gbkey=CDS;gene=pmrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461238.1;locus_tag=O5C65_000174;product=lipopolysaccharide core heptose(II)-phosphate phosphatase PmrG;protein_id=HJH9170363.1;transl_table=11 DALFDA020000001.1 tpg gene 179060 179485 . - . ID=gene-O5C65_000175;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=O5C65_000175 DALFDA020000001.1 Protein Homology CDS 179060 179485 . - 0 ID=cds-HJH9170364.1;Parent=gene-O5C65_000175;Dbxref=NCBI_GP:HJH9170364.1;Name=HJH9170364.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461237.1;locus_tag=O5C65_000175;product=nucleoside triphosphatase NudI;protein_id=HJH9170364.1;transl_table=11 DALFDA020000001.1 tpg gene 179764 180306 . + . ID=gene-O5C65_000176;Name=O5C65_000176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000176 DALFDA020000001.1 Protein Homology CDS 179764 180306 . + 0 ID=cds-HJH9170365.1;Parent=gene-O5C65_000176;Dbxref=NCBI_GP:HJH9170365.1;Name=HJH9170365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311165.2;locus_tag=O5C65_000176;product=YfaZ family protein;protein_id=HJH9170365.1;transl_table=11 DALFDA020000001.1 tpg gene 180422 181618 . + . ID=gene-O5C65_000177;Name=O5C65_000177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000177 DALFDA020000001.1 Protein Homology CDS 180422 181618 . + 0 ID=cds-HJH9170366.1;Parent=gene-O5C65_000177;Dbxref=NCBI_GP:HJH9170366.1;Name=HJH9170366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461235.1;locus_tag=O5C65_000177;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=HJH9170366.1;transl_table=11 DALFDA020000001.1 tpg gene 181728 182750 . - . ID=gene-O5C65_000178;Name=sseL;gbkey=Gene;gene=sseL;gene_biotype=protein_coding;locus_tag=O5C65_000178 DALFDA020000001.1 Protein Homology CDS 181728 182750 . - 0 ID=cds-HJH9170367.1;Parent=gene-O5C65_000178;Dbxref=NCBI_GP:HJH9170367.1;Name=HJH9170367.1;gbkey=CDS;gene=sseL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017745.1;locus_tag=O5C65_000178;product=SPI-2 type III secretion system effector deubiquitinase SseL;protein_id=HJH9170367.1;transl_table=11 DALFDA020000001.1 tpg gene 183123 184313 . - . ID=gene-O5C65_000179;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=O5C65_000179 DALFDA020000001.1 Protein Homology CDS 183123 184313 . - 0 ID=cds-HJH9170368.1;Parent=gene-O5C65_000179;Dbxref=NCBI_GP:HJH9170368.1;Name=HJH9170368.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461228.1;locus_tag=O5C65_000179;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=HJH9170368.1;transl_table=11 DALFDA020000001.1 tpg gene 184310 185569 . - . ID=gene-O5C65_000180;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=O5C65_000180 DALFDA020000001.1 Protein Homology CDS 184310 185569 . - 0 ID=cds-HJH9170369.1;Parent=gene-O5C65_000180;Dbxref=NCBI_GP:HJH9170369.1;Name=HJH9170369.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461227.1;locus_tag=O5C65_000180;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=HJH9170369.1;transl_table=11 DALFDA020000001.1 tpg gene 185559 187187 . - . ID=gene-O5C65_000181;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=O5C65_000181 DALFDA020000001.1 Protein Homology CDS 185559 187187 . - 0 ID=cds-HJH9170370.1;Parent=gene-O5C65_000181;Dbxref=NCBI_GP:HJH9170370.1;Name=HJH9170370.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461226.1;locus_tag=O5C65_000181;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=HJH9170370.1;transl_table=11 DALFDA020000001.1 tpg gene 187460 188818 . + . ID=gene-O5C65_000182;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=O5C65_000182 DALFDA020000001.1 Protein Homology CDS 187460 188818 . + 0 ID=cds-HJH9170371.1;Parent=gene-O5C65_000182;Dbxref=NCBI_GP:HJH9170371.1;Name=HJH9170371.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461225.1;locus_tag=O5C65_000182;product=glycerol-3-phosphate transporter;protein_id=HJH9170371.1;transl_table=11 DALFDA020000001.1 tpg gene 188823 189893 . + . ID=gene-O5C65_000183;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=O5C65_000183 DALFDA020000001.1 Protein Homology CDS 188823 189893 . + 0 ID=cds-HJH9170372.1;Parent=gene-O5C65_000183;Dbxref=NCBI_GP:HJH9170372.1;Name=HJH9170372.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461224.1;locus_tag=O5C65_000183;product=glycerophosphodiester phosphodiesterase;protein_id=HJH9170372.1;transl_table=11 DALFDA020000001.1 tpg gene 190009 190887 . - . ID=gene-O5C65_000184;Name=O5C65_000184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000184 DALFDA020000001.1 Protein Homology CDS 190009 190887 . - 0 ID=cds-HJH9170373.1;Parent=gene-O5C65_000184;Dbxref=NCBI_GP:HJH9170373.1;Name=HJH9170373.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461223.1;locus_tag=O5C65_000184;product=LysR family transcriptional regulator;protein_id=HJH9170373.1;transl_table=11 DALFDA020000001.1 tpg gene 191049 192239 . + . ID=gene-O5C65_000185;Name=O5C65_000185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000185 DALFDA020000001.1 Protein Homology CDS 191049 192239 . + 0 ID=cds-HJH9170374.1;Parent=gene-O5C65_000185;Dbxref=NCBI_GP:HJH9170374.1;Name=HJH9170374.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461222.1;locus_tag=O5C65_000185;product=MFS transporter;protein_id=HJH9170374.1;transl_table=11 DALFDA020000001.1 tpg gene 192241 192495 . - . ID=gene-O5C65_000186;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=O5C65_000186 DALFDA020000001.1 Protein Homology CDS 192241 192495 . - 0 ID=cds-HJH9170375.1;Parent=gene-O5C65_000186;Dbxref=NCBI_GP:HJH9170375.1;Name=HJH9170375.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461221.1;locus_tag=O5C65_000186;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=HJH9170375.1;transl_table=11 DALFDA020000001.1 tpg gene 192495 193625 . - . ID=gene-O5C65_000187;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=O5C65_000187 DALFDA020000001.1 Protein Homology CDS 192495 193625 . - 0 ID=cds-HJH9170376.1;Parent=gene-O5C65_000187;Dbxref=NCBI_GP:HJH9170376.1;Name=HJH9170376.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=O5C65_000187;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=HJH9170376.1;transl_table=11 DALFDA020000001.1 tpg gene 193738 196023 . - . ID=gene-O5C65_000188;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=O5C65_000188 DALFDA020000001.1 Protein Homology CDS 193738 196023 . - 0 ID=cds-HJH9170377.1;Parent=gene-O5C65_000188;Dbxref=NCBI_GP:HJH9170377.1;Name=HJH9170377.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=O5C65_000188;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=HJH9170377.1;transl_table=11 DALFDA020000001.1 tpg gene 196379 197107 . - . ID=gene-O5C65_000189;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=O5C65_000189 DALFDA020000001.1 Protein Homology CDS 196379 197107 . - 0 ID=cds-HJH9170378.1;Parent=gene-O5C65_000189;Dbxref=NCBI_GP:HJH9170378.1;Name=HJH9170378.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461218.1;locus_tag=O5C65_000189;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=HJH9170378.1;transl_table=11 DALFDA020000001.1 tpg pseudogene 197190 198073 . - . ID=gene-O5C65_000190;Name=O5C65_000190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_000190;pseudo=true DALFDA020000001.1 Protein Homology CDS 197190 198073 . - 0 ID=cds-O5C65_000190;Parent=gene-O5C65_000190;Note=frameshifted;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461217.3;locus_tag=O5C65_000190;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 DALFDA020000001.1 tpg gene 198123 199448 . + . ID=gene-O5C65_000191;Name=O5C65_000191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000191 DALFDA020000001.1 Protein Homology CDS 198123 199448 . + 0 ID=cds-HJH9170379.1;Parent=gene-O5C65_000191;Dbxref=NCBI_GP:HJH9170379.1;Name=HJH9170379.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461216.1;locus_tag=O5C65_000191;product=MFS transporter;protein_id=HJH9170379.1;transl_table=11 DALFDA020000001.1 tpg gene 199463 200665 . + . ID=gene-O5C65_000192;Name=O5C65_000192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000192 DALFDA020000001.1 Protein Homology CDS 199463 200665 . + 0 ID=cds-HJH9170380.1;Parent=gene-O5C65_000192;Dbxref=NCBI_GP:HJH9170380.1;Name=HJH9170380.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461215.1;locus_tag=O5C65_000192;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=HJH9170380.1;transl_table=11 DALFDA020000001.1 tpg gene 201075 203711 . + . ID=gene-O5C65_000193;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=O5C65_000193 DALFDA020000001.1 Protein Homology CDS 201075 203711 . + 0 ID=cds-HJH9170381.1;Parent=gene-O5C65_000193;Dbxref=NCBI_GP:HJH9170381.1;Name=HJH9170381.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461214.1;locus_tag=O5C65_000193;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=HJH9170381.1;transl_table=11 DALFDA020000001.1 tpg gene 203829 206675 . + . ID=gene-O5C65_000194;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=O5C65_000194 DALFDA020000001.1 Protein Homology CDS 203829 206675 . + 0 ID=cds-HJH9170382.1;Parent=gene-O5C65_000194;Dbxref=NCBI_GP:HJH9170382.1;Name=HJH9170382.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461213.1;locus_tag=O5C65_000194;product=two-component system sensor histidine kinase RcsC;protein_id=HJH9170382.1;transl_table=11 DALFDA020000001.1 tpg gene 206778 207428 . - . ID=gene-O5C65_000195;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=O5C65_000195 DALFDA020000001.1 Protein Homology CDS 206778 207428 . - 0 ID=cds-HJH9170383.1;Parent=gene-O5C65_000195;Dbxref=NCBI_GP:HJH9170383.1;Name=HJH9170383.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461212.1;locus_tag=O5C65_000195;product=response regulator transcription factor RcsB;protein_id=HJH9170383.1;transl_table=11 DALFDA020000001.1 tpg gene 207445 210114 . - . ID=gene-O5C65_000196;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=O5C65_000196 DALFDA020000001.1 Protein Homology CDS 207445 210114 . - 0 ID=cds-HJH9170384.1;Parent=gene-O5C65_000196;Dbxref=NCBI_GP:HJH9170384.1;Name=HJH9170384.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461211.1;locus_tag=O5C65_000196;product=phosphotransferase RcsD;protein_id=HJH9170384.1;transl_table=11 DALFDA020000001.1 tpg gene 210843 211979 . + . ID=gene-O5C65_000197;Name=O5C65_000197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000197 DALFDA020000001.1 Protein Homology CDS 210843 211979 . + 0 ID=cds-HJH9170385.1;Parent=gene-O5C65_000197;Dbxref=NCBI_GP:HJH9170385.1;Name=HJH9170385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461210.1;locus_tag=O5C65_000197;product=porin OmpC;protein_id=HJH9170385.1;transl_table=11 DALFDA020000001.1 tpg gene 212094 213146 . + . ID=gene-O5C65_000198;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=O5C65_000198 DALFDA020000001.1 Protein Homology CDS 212094 213146 . + 0 ID=cds-HJH9170386.1;Parent=gene-O5C65_000198;Dbxref=NCBI_GP:HJH9170386.1;Name=HJH9170386.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461209.1;locus_tag=O5C65_000198;product=FAD:protein FMN transferase ApbE;protein_id=HJH9170386.1;transl_table=11 DALFDA020000001.1 tpg gene 213227 214288 . + . ID=gene-O5C65_000199;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=O5C65_000199 DALFDA020000001.1 Protein Homology CDS 213227 214288 . + 0 ID=cds-HJH9170387.1;Parent=gene-O5C65_000199;Dbxref=NCBI_GP:HJH9170387.1;Name=HJH9170387.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461208.1;locus_tag=O5C65_000199;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=HJH9170387.1;transl_table=11 DALFDA020000001.1 tpg gene 214291 214941 . + . ID=gene-O5C65_000200;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=O5C65_000200 DALFDA020000001.1 Protein Homology CDS 214291 214941 . + 0 ID=cds-HJH9170388.1;Parent=gene-O5C65_000200;Dbxref=NCBI_GP:HJH9170388.1;Name=HJH9170388.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461207.1;locus_tag=O5C65_000200;product=DNA oxidative demethylase AlkB;protein_id=HJH9170388.1;transl_table=11 DALFDA020000001.1 tpg gene 215017 216660 . + . ID=gene-O5C65_000201;Name=O5C65_000201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000201 DALFDA020000001.1 Protein Homology CDS 215017 216660 . + 0 ID=cds-HJH9170389.1;Parent=gene-O5C65_000201;Dbxref=NCBI_GP:HJH9170389.1;Name=HJH9170389.1;Ontology_term=GO:0015833,GO:0140359,GO:1904680;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461206.1;locus_tag=O5C65_000201;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=HJH9170389.1;transl_table=11 DALFDA020000001.1 tpg gene 216852 217346 . - . ID=gene-O5C65_000202;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=O5C65_000202 DALFDA020000001.1 Protein Homology CDS 216852 217346 . - 0 ID=cds-HJH9170390.1;Parent=gene-O5C65_000202;Dbxref=NCBI_GP:HJH9170390.1;Name=HJH9170390.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461205.1;locus_tag=O5C65_000202;product=serine protease inhibitor ecotin;protein_id=HJH9170390.1;transl_table=11 DALFDA020000001.1 tpg gene 217760 218251 . + . ID=gene-O5C65_000203;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=O5C65_000203 DALFDA020000001.1 Protein Homology CDS 217760 218251 . + 0 ID=cds-HJH9170391.1;Parent=gene-O5C65_000203;Dbxref=NCBI_GP:HJH9170391.1;Name=HJH9170391.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461204.1;locus_tag=O5C65_000203;product=ferredoxin-type protein NapF;protein_id=HJH9170391.1;transl_table=11 DALFDA020000001.1 tpg gene 218241 218504 . + . ID=gene-O5C65_000204;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=O5C65_000204 DALFDA020000001.1 Protein Homology CDS 218241 218504 . + 0 ID=cds-HJH9170392.1;Parent=gene-O5C65_000204;Dbxref=NCBI_GP:HJH9170392.1;Name=HJH9170392.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461203.1;locus_tag=O5C65_000204;product=chaperone NapD;protein_id=HJH9170392.1;transl_table=11 DALFDA020000001.1 tpg gene 218501 220987 . + . ID=gene-O5C65_000205;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=O5C65_000205 DALFDA020000001.1 Protein Homology CDS 218501 220987 . + 0 ID=cds-HJH9170393.1;Parent=gene-O5C65_000205;Dbxref=NCBI_GP:HJH9170393.1;Name=HJH9170393.1;Ontology_term=GO:0008940,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;gene=napA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461202.1;locus_tag=O5C65_000205;product=nitrate reductase catalytic subunit NapA;protein_id=HJH9170393.1;transl_table=11 DALFDA020000001.1 tpg gene 220994 221689 . + . ID=gene-O5C65_000206;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=O5C65_000206 DALFDA020000001.1 Protein Homology CDS 220994 221689 . + 0 ID=cds-HJH9170394.1;Parent=gene-O5C65_000206;Dbxref=NCBI_GP:HJH9170394.1;Name=HJH9170394.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461201.1;locus_tag=O5C65_000206;product=ferredoxin-type protein NapG;protein_id=HJH9170394.1;transl_table=11 DALFDA020000001.1 tpg gene 221676 222545 . + . ID=gene-O5C65_000207;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=O5C65_000207 DALFDA020000001.1 Protein Homology CDS 221676 222545 . + 0 ID=cds-HJH9170395.1;Parent=gene-O5C65_000207;Dbxref=NCBI_GP:HJH9170395.1;Name=HJH9170395.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461200.1;locus_tag=O5C65_000207;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=HJH9170395.1;transl_table=11 DALFDA020000001.1 tpg gene 222661 223110 . + . ID=gene-O5C65_000208;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=O5C65_000208 DALFDA020000001.1 Protein Homology CDS 222661 223110 . + 0 ID=cds-HJH9170396.1;Parent=gene-O5C65_000208;Dbxref=NCBI_GP:HJH9170396.1;Name=HJH9170396.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461199.1;locus_tag=O5C65_000208;product=nitrate reductase cytochrome c-type subunit;protein_id=HJH9170396.1;transl_table=11 DALFDA020000001.1 tpg gene 223120 223722 . + . ID=gene-O5C65_000209;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=O5C65_000209 DALFDA020000001.1 Protein Homology CDS 223120 223722 . + 0 ID=cds-HJH9170397.1;Parent=gene-O5C65_000209;Dbxref=NCBI_GP:HJH9170397.1;Name=HJH9170397.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461198.1;locus_tag=O5C65_000209;product=cytochrome c-type protein NapC;protein_id=HJH9170397.1;transl_table=11 ##sequence-region DALFDA020000002.1 1 223494 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000002.1 tpg region 1 223494 . + . ID=DALFDA020000002.1:1..223494;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000002.1 tpg gene 446 880 . + . ID=gene-O5C65_000210;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=O5C65_000210 DALFDA020000002.1 Protein Homology CDS 446 880 . + 0 ID=cds-HJH9170398.1;Parent=gene-O5C65_000210;Dbxref=NCBI_GP:HJH9170398.1;Name=HJH9170398.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460611.1;locus_tag=O5C65_000210;product=universal stress protein UspF;protein_id=HJH9170398.1;transl_table=11 DALFDA020000002.1 tpg gene 933 1271 . - . ID=gene-O5C65_000211;Name=O5C65_000211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000211 DALFDA020000002.1 Protein Homology CDS 933 1271 . - 0 ID=cds-HJH9170399.1;Parent=gene-O5C65_000211;Dbxref=NCBI_GP:HJH9170399.1;Name=HJH9170399.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460612.1;locus_tag=O5C65_000211;product=SMR family transporter;protein_id=HJH9170399.1;transl_table=11 DALFDA020000002.1 tpg gene 1264 1416 . - . ID=gene-O5C65_000212;Name=O5C65_000212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000212 DALFDA020000002.1 Protein Homology CDS 1264 1416 . - 0 ID=cds-HJH9170400.1;Parent=gene-O5C65_000212;Dbxref=NCBI_GP:HJH9170400.1;Name=HJH9170400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465579.1;locus_tag=O5C65_000212;product=multidrug transporter;protein_id=HJH9170400.1;transl_table=11 DALFDA020000002.1 tpg pseudogene 1372 1520 . + . ID=gene-O5C65_000213;Name=O5C65_000213;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_000213;pseudo=true DALFDA020000002.1 Protein Homology CDS 1372 1520 . + 0 ID=cds-O5C65_000213;Parent=gene-O5C65_000213;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309956.1;locus_tag=O5C65_000213;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 DALFDA020000002.1 tpg gene 1626 2561 . + . ID=gene-O5C65_000214;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=O5C65_000214 DALFDA020000002.1 Protein Homology CDS 1626 2561 . + 0 ID=cds-HJH9170401.1;Parent=gene-O5C65_000214;Dbxref=NCBI_GP:HJH9170401.1;Name=HJH9170401.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460613.1;locus_tag=O5C65_000214;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=HJH9170401.1;transl_table=11 DALFDA020000002.1 tpg gene 2605 3978 . - . ID=gene-O5C65_000215;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=O5C65_000215 DALFDA020000002.1 Protein Homology CDS 2605 3978 . - 0 ID=cds-HJH9170402.1;Parent=gene-O5C65_000215;Dbxref=NCBI_GP:HJH9170402.1;Name=HJH9170402.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460614.1;locus_tag=O5C65_000215;product=ATP-dependent RNA helicase DbpA;protein_id=HJH9170402.1;transl_table=11 DALFDA020000002.1 tpg gene 4007 4189 . - . ID=gene-O5C65_000216;Name=O5C65_000216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000216 DALFDA020000002.1 Protein Homology CDS 4007 4189 . - 0 ID=cds-HJH9170403.1;Parent=gene-O5C65_000216;Dbxref=NCBI_GP:HJH9170403.1;Name=HJH9170403.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048180.1;locus_tag=O5C65_000216;product=hypothetical protein;protein_id=HJH9170403.1;transl_table=11 DALFDA020000002.1 tpg gene 4465 5448 . - . ID=gene-O5C65_000217;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=O5C65_000217 DALFDA020000002.1 Protein Homology CDS 4465 5448 . - 0 ID=cds-HJH9170404.1;Parent=gene-O5C65_000217;Dbxref=NCBI_GP:HJH9170404.1;Name=HJH9170404.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460615.1;locus_tag=O5C65_000217;product=zinc transporter ZntB;protein_id=HJH9170404.1;transl_table=11 DALFDA020000002.1 tpg gene 5594 6748 . - . ID=gene-O5C65_000218;Name=O5C65_000218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000218 DALFDA020000002.1 Protein Homology CDS 5594 6748 . - 0 ID=cds-HJH9170405.1;Parent=gene-O5C65_000218;Dbxref=NCBI_GP:HJH9170405.1;Name=HJH9170405.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460616.1;locus_tag=O5C65_000218;product=methyl-accepting chemotaxis protein;protein_id=HJH9170405.1;transl_table=11 DALFDA020000002.1 tpg gene 7141 7704 . - . ID=gene-O5C65_000219;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=O5C65_000219 DALFDA020000002.1 Protein Homology CDS 7141 7704 . - 0 ID=cds-HJH9170406.1;Parent=gene-O5C65_000219;Dbxref=NCBI_GP:HJH9170406.1;Name=HJH9170406.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460617.1;locus_tag=O5C65_000219;product=DNA endonuclease SmrA;protein_id=HJH9170406.1;transl_table=11 DALFDA020000002.1 tpg gene 7962 8477 . + . ID=gene-O5C65_000220;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=O5C65_000220 DALFDA020000002.1 Protein Homology CDS 7962 8477 . + 0 ID=cds-HJH9170407.1;Parent=gene-O5C65_000220;Dbxref=NCBI_GP:HJH9170407.1;Name=HJH9170407.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460618.1;locus_tag=O5C65_000220;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=HJH9170407.1;transl_table=11 DALFDA020000002.1 tpg gene 8673 9425 . + . ID=gene-O5C65_000221;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=O5C65_000221 DALFDA020000002.1 Protein Homology CDS 8673 9425 . + 0 ID=cds-HJH9170408.1;Parent=gene-O5C65_000221;Dbxref=NCBI_GP:HJH9170408.1;Name=HJH9170408.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=O5C65_000221;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=HJH9170408.1;transl_table=11 DALFDA020000002.1 tpg gene 9576 10523 . + . ID=gene-O5C65_000222;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=O5C65_000222 DALFDA020000002.1 Protein Homology CDS 9576 10523 . + 0 ID=cds-HJH9170409.1;Parent=gene-O5C65_000222;Dbxref=NCBI_GP:HJH9170409.1;Name=HJH9170409.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460620.1;locus_tag=O5C65_000222;product=universal stress protein UspE;protein_id=HJH9170409.1;transl_table=11 DALFDA020000002.1 tpg gene 10578 10832 . - . ID=gene-O5C65_000223;Name=O5C65_000223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000223 DALFDA020000002.1 Protein Homology CDS 10578 10832 . - 0 ID=cds-HJH9170410.1;Parent=gene-O5C65_000223;Dbxref=NCBI_GP:HJH9170410.1;Name=HJH9170410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460621.1;locus_tag=O5C65_000223;product=DUF2534 family protein;protein_id=HJH9170410.1;transl_table=11 DALFDA020000002.1 tpg gene 11070 12101 . + . ID=gene-O5C65_000224;Name=O5C65_000224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000224 DALFDA020000002.1 Protein Homology CDS 11070 12101 . + 0 ID=cds-HJH9170411.1;Parent=gene-O5C65_000224;Dbxref=NCBI_GP:HJH9170411.1;Name=HJH9170411.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460622.1;locus_tag=O5C65_000224;product=mechanosensitive ion channel family protein;protein_id=HJH9170411.1;transl_table=11 DALFDA020000002.1 tpg gene 12183 12785 . - . ID=gene-O5C65_000225;Name=O5C65_000225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000225 DALFDA020000002.1 Protein Homology CDS 12183 12785 . - 0 ID=cds-HJH9170412.1;Parent=gene-O5C65_000225;Dbxref=NCBI_GP:HJH9170412.1;Name=HJH9170412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460623.1;locus_tag=O5C65_000225;product=XRE family transcriptional regulator;protein_id=HJH9170412.1;transl_table=11 DALFDA020000002.1 tpg gene 12829 13515 . + . ID=gene-O5C65_000226;Name=O5C65_000226;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000226 DALFDA020000002.1 Protein Homology CDS 12829 13515 . + 0 ID=cds-HJH9170413.1;Parent=gene-O5C65_000226;Dbxref=NCBI_GP:HJH9170413.1;Name=HJH9170413.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460624.1;locus_tag=O5C65_000226;product=B3/B4 domain-containing protein;protein_id=HJH9170413.1;transl_table=11 DALFDA020000002.1 tpg gene 13543 13881 . + . ID=gene-O5C65_000227;Name=O5C65_000227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000227 DALFDA020000002.1 Protein Homology CDS 13543 13881 . + 0 ID=cds-HJH9170414.1;Parent=gene-O5C65_000227;Dbxref=NCBI_GP:HJH9170414.1;Name=HJH9170414.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051808.1;locus_tag=O5C65_000227;product=antibiotic biosynthesis monooxygenase family protein;protein_id=HJH9170414.1;transl_table=11 DALFDA020000002.1 tpg gene 13988 14545 . - . ID=gene-O5C65_000228;Name=O5C65_000228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000228 DALFDA020000002.1 Protein Homology CDS 13988 14545 . - 0 ID=cds-HJH9170415.1;Parent=gene-O5C65_000228;Dbxref=NCBI_GP:HJH9170415.1;Name=HJH9170415.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460625.1;locus_tag=O5C65_000228;product=redoxin family protein;protein_id=HJH9170415.1;transl_table=11 DALFDA020000002.1 tpg gene 14644 15477 . - . ID=gene-O5C65_000229;Name=zirS;gbkey=Gene;gene=zirS;gene_biotype=protein_coding;locus_tag=O5C65_000229 DALFDA020000002.1 Protein Homology CDS 14644 15477 . - 0 ID=cds-HJH9170416.1;Parent=gene-O5C65_000229;Dbxref=NCBI_GP:HJH9170416.1;Name=HJH9170416.1;gbkey=CDS;gene=zirS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460626.1;locus_tag=O5C65_000229;product=two-partner-like secretion system exoprotein ZirS;protein_id=HJH9170416.1;transl_table=11 DALFDA020000002.1 tpg gene 15498 17480 . - . ID=gene-O5C65_000230;Name=zirT;gbkey=Gene;gene=zirT;gene_biotype=protein_coding;locus_tag=O5C65_000230 DALFDA020000002.1 Protein Homology CDS 15498 17480 . - 0 ID=cds-HJH9170417.1;Parent=gene-O5C65_000230;Dbxref=NCBI_GP:HJH9170417.1;Name=HJH9170417.1;gbkey=CDS;gene=zirT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460627.1;locus_tag=O5C65_000230;product=two-partner secretion translocator ZirT;protein_id=HJH9170417.1;transl_table=11 DALFDA020000002.1 tpg gene 17555 18400 . - . ID=gene-O5C65_000231;Name=zirU;gbkey=Gene;gene=zirU;gene_biotype=protein_coding;locus_tag=O5C65_000231 DALFDA020000002.1 Protein Homology CDS 17555 18400 . - 0 ID=cds-HJH9170418.1;Parent=gene-O5C65_000231;Dbxref=NCBI_GP:HJH9170418.1;Name=HJH9170418.1;gbkey=CDS;gene=zirU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460628.1;locus_tag=O5C65_000231;product=two-partner-like secretion system exoprotein ZirU;protein_id=HJH9170418.1;transl_table=11 DALFDA020000002.1 tpg gene 18696 19553 . + . ID=gene-O5C65_000232;Name=O5C65_000232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000232 DALFDA020000002.1 Protein Homology CDS 18696 19553 . + 0 ID=cds-HJH9170419.1;Parent=gene-O5C65_000232;Dbxref=NCBI_GP:HJH9170419.1;Name=HJH9170419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460629.1;locus_tag=O5C65_000232;product=GyrI-like domain-containing protein;protein_id=HJH9170419.1;transl_table=11 DALFDA020000002.1 tpg gene 19944 21053 . + . ID=gene-O5C65_000233;Name=O5C65_000233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000233 DALFDA020000002.1 Protein Homology CDS 19944 21053 . + 0 ID=cds-HJH9170420.1;Parent=gene-O5C65_000233;Dbxref=NCBI_GP:HJH9170420.1;Name=HJH9170420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448089.1;locus_tag=O5C65_000233;product=hypothetical protein;protein_id=HJH9170420.1;transl_table=11 DALFDA020000002.1 tpg gene 21267 21503 . - . ID=gene-O5C65_000234;Name=O5C65_000234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000234 DALFDA020000002.1 Protein Homology CDS 21267 21503 . - 0 ID=cds-HJH9170421.1;Parent=gene-O5C65_000234;Dbxref=NCBI_GP:HJH9170421.1;Name=HJH9170421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168019.1;locus_tag=O5C65_000234;product=YgdI/YgdR family lipoprotein;protein_id=HJH9170421.1;transl_table=11 DALFDA020000002.1 tpg gene 21632 22222 . - . ID=gene-O5C65_000235;Name=O5C65_000235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000235 DALFDA020000002.1 Protein Homology CDS 21632 22222 . - 0 ID=cds-HJH9170422.1;Parent=gene-O5C65_000235;Dbxref=NCBI_GP:HJH9170422.1;Name=HJH9170422.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460632.1;locus_tag=O5C65_000235;product=TetR/AcrR family transcriptional regulator;protein_id=HJH9170422.1;transl_table=11 DALFDA020000002.1 tpg gene 22300 23013 . + . ID=gene-O5C65_000236;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=O5C65_000236 DALFDA020000002.1 Protein Homology CDS 22300 23013 . + 0 ID=cds-HJH9170423.1;Parent=gene-O5C65_000236;Dbxref=NCBI_GP:HJH9170423.1;Name=HJH9170423.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460633.1;locus_tag=O5C65_000236;product=SDR family oxidoreductase;protein_id=HJH9170423.1;transl_table=11 DALFDA020000002.1 tpg gene 23104 23973 . - . ID=gene-O5C65_000237;Name=O5C65_000237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000237 DALFDA020000002.1 Protein Homology CDS 23104 23973 . - 0 ID=cds-HJH9170424.1;Parent=gene-O5C65_000237;Dbxref=NCBI_GP:HJH9170424.1;Name=HJH9170424.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460634.1;locus_tag=O5C65_000237;product=aldo/keto reductase;protein_id=HJH9170424.1;transl_table=11 DALFDA020000002.1 tpg gene 24250 25155 . - . ID=gene-O5C65_000238;Name=O5C65_000238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000238 DALFDA020000002.1 Protein Homology CDS 24250 25155 . - 0 ID=cds-HJH9170425.1;Parent=gene-O5C65_000238;Dbxref=NCBI_GP:HJH9170425.1;Name=HJH9170425.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460635.1;locus_tag=O5C65_000238;product=LysR family transcriptional regulator;protein_id=HJH9170425.1;transl_table=11 DALFDA020000002.1 tpg gene 25274 26203 . + . ID=gene-O5C65_000239;Name=O5C65_000239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000239 DALFDA020000002.1 Protein Homology CDS 25274 26203 . + 0 ID=cds-HJH9170426.1;Parent=gene-O5C65_000239;Dbxref=NCBI_GP:HJH9170426.1;Name=HJH9170426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460636.1;locus_tag=O5C65_000239;product=aromatic alcohol reductase;protein_id=HJH9170426.1;transl_table=11 DALFDA020000002.1 tpg gene 26300 27913 . - . ID=gene-O5C65_000240;Name=O5C65_000240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000240 DALFDA020000002.1 Protein Homology CDS 26300 27913 . - 0 ID=cds-HJH9170427.1;Parent=gene-O5C65_000240;Dbxref=NCBI_GP:HJH9170427.1;Name=HJH9170427.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460637.1;locus_tag=O5C65_000240;product=peptide ABC transporter substrate-binding protein;protein_id=HJH9170427.1;transl_table=11 DALFDA020000002.1 tpg gene 28103 28831 . + . ID=gene-O5C65_000241;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=O5C65_000241 DALFDA020000002.1 Protein Homology CDS 28103 28831 . + 0 ID=cds-HJH9170428.1;Parent=gene-O5C65_000241;Dbxref=NCBI_GP:HJH9170428.1;Name=HJH9170428.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460638.1;locus_tag=O5C65_000241;product=murein tripeptide amidase MpaA;protein_id=HJH9170428.1;transl_table=11 DALFDA020000002.1 tpg gene 28806 29771 . - . ID=gene-O5C65_000242;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=O5C65_000242 DALFDA020000002.1 Protein Homology CDS 28806 29771 . - 0 ID=cds-HJH9170429.1;Parent=gene-O5C65_000242;Dbxref=NCBI_GP:HJH9170429.1;Name=HJH9170429.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460639.1;locus_tag=O5C65_000242;product=L-Ala-D/L-Glu epimerase;protein_id=HJH9170429.1;transl_table=11 DALFDA020000002.1 tpg gene 29887 30393 . + . ID=gene-O5C65_000243;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=O5C65_000243 DALFDA020000002.1 Protein Homology CDS 29887 30393 . + 0 ID=cds-HJH9170430.1;Parent=gene-O5C65_000243;Dbxref=NCBI_GP:HJH9170430.1;Name=HJH9170430.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460640.1;locus_tag=O5C65_000243;product=thiol peroxidase;protein_id=HJH9170430.1;transl_table=11 DALFDA020000002.1 tpg gene 30483 32024 . - . ID=gene-O5C65_000244;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=O5C65_000244 DALFDA020000002.1 Protein Homology CDS 30483 32024 . - 0 ID=cds-HJH9170431.1;Parent=gene-O5C65_000244;Dbxref=NCBI_GP:HJH9170431.1;Name=HJH9170431.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460641.1;locus_tag=O5C65_000244;product=transcriptional regulator TyrR;protein_id=HJH9170431.1;transl_table=11 DALFDA020000002.1 tpg gene 32172 33233 . - . ID=gene-O5C65_000245;Name=O5C65_000245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000245 DALFDA020000002.1 Protein Homology CDS 32172 33233 . - 0 ID=cds-HJH9170432.1;Parent=gene-O5C65_000245;Dbxref=NCBI_GP:HJH9170432.1;Name=HJH9170432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460642.1;locus_tag=O5C65_000245;product=TIGR01620 family protein;protein_id=HJH9170432.1;transl_table=11 DALFDA020000002.1 tpg gene 33230 34627 . - . ID=gene-O5C65_000246;Name=O5C65_000246;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000246 DALFDA020000002.1 Protein Homology CDS 33230 34627 . - 0 ID=cds-HJH9170433.1;Parent=gene-O5C65_000246;Dbxref=NCBI_GP:HJH9170433.1;Name=HJH9170433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=O5C65_000246;product=YcjX family protein;protein_id=HJH9170433.1;transl_table=11 DALFDA020000002.1 tpg gene 34776 35090 . - . ID=gene-O5C65_000247;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=O5C65_000247 DALFDA020000002.1 Protein Homology CDS 34776 35090 . - 0 ID=cds-HJH9170434.1;Parent=gene-O5C65_000247;Dbxref=NCBI_GP:HJH9170434.1;Name=HJH9170434.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460644.1;locus_tag=O5C65_000247;product=thiosulfate sulfurtransferase PspE;protein_id=HJH9170434.1;transl_table=11 DALFDA020000002.1 tpg gene 35166 35384 . - . ID=gene-O5C65_000248;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=O5C65_000248 DALFDA020000002.1 Protein Homology CDS 35166 35384 . - 0 ID=cds-HJH9170435.1;Parent=gene-O5C65_000248;Dbxref=NCBI_GP:HJH9170435.1;Name=HJH9170435.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460645.1;locus_tag=O5C65_000248;product=phage shock protein PspD;protein_id=HJH9170435.1;transl_table=11 DALFDA020000002.1 tpg gene 35407 35766 . - . ID=gene-O5C65_000249;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=O5C65_000249 DALFDA020000002.1 Protein Homology CDS 35407 35766 . - 0 ID=cds-HJH9170436.1;Parent=gene-O5C65_000249;Dbxref=NCBI_GP:HJH9170436.1;Name=HJH9170436.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460646.1;locus_tag=O5C65_000249;product=envelope stress response membrane protein PspC;protein_id=HJH9170436.1;transl_table=11 DALFDA020000002.1 tpg gene 35766 35990 . - . ID=gene-O5C65_000250;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=O5C65_000250 DALFDA020000002.1 Protein Homology CDS 35766 35990 . - 0 ID=cds-HJH9170437.1;Parent=gene-O5C65_000250;Dbxref=NCBI_GP:HJH9170437.1;Name=HJH9170437.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460647.1;locus_tag=O5C65_000250;product=envelope stress response membrane protein PspB;protein_id=HJH9170437.1;transl_table=11 DALFDA020000002.1 tpg gene 36050 36718 . - . ID=gene-O5C65_000251;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=O5C65_000251 DALFDA020000002.1 Protein Homology CDS 36050 36718 . - 0 ID=cds-HJH9170438.1;Parent=gene-O5C65_000251;Dbxref=NCBI_GP:HJH9170438.1;Name=HJH9170438.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460648.1;locus_tag=O5C65_000251;product=phage shock protein PspA;protein_id=HJH9170438.1;transl_table=11 DALFDA020000002.1 tpg gene 36889 37869 . + . ID=gene-O5C65_000252;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=O5C65_000252 DALFDA020000002.1 Protein Homology CDS 36889 37869 . + 0 ID=cds-HJH9170439.1;Parent=gene-O5C65_000252;Dbxref=NCBI_GP:HJH9170439.1;Name=HJH9170439.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460649.1;locus_tag=O5C65_000252;product=phage shock protein operon transcriptional activator;protein_id=HJH9170439.1;transl_table=11 DALFDA020000002.1 tpg gene 37981 39630 . + . ID=gene-O5C65_000253;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=O5C65_000253 DALFDA020000002.1 Protein Homology CDS 37981 39630 . + 0 ID=cds-HJH9170440.1;Parent=gene-O5C65_000253;Dbxref=NCBI_GP:HJH9170440.1;Name=HJH9170440.1;gbkey=CDS;gene=sapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=O5C65_000253;product=peptide ABC transporter substrate-binding protein SapA;protein_id=HJH9170440.1;transl_table=11 DALFDA020000002.1 tpg gene 39627 40592 . + . ID=gene-O5C65_000254;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=O5C65_000254 DALFDA020000002.1 Protein Homology CDS 39627 40592 . + 0 ID=cds-HJH9170441.1;Parent=gene-O5C65_000254;Dbxref=NCBI_GP:HJH9170441.1;Name=HJH9170441.1;gbkey=CDS;gene=sapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=O5C65_000254;product=peptide ABC transporter permease SapB;protein_id=HJH9170441.1;transl_table=11 DALFDA020000002.1 tpg gene 40579 41469 . + . ID=gene-O5C65_000255;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=O5C65_000255 DALFDA020000002.1 Protein Homology CDS 40579 41469 . + 0 ID=cds-HJH9170442.1;Parent=gene-O5C65_000255;Dbxref=NCBI_GP:HJH9170442.1;Name=HJH9170442.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460652.1;locus_tag=O5C65_000255;product=peptide ABC transporter permease SapC;protein_id=HJH9170442.1;transl_table=11 DALFDA020000002.1 tpg gene 41469 42461 . + . ID=gene-O5C65_000256;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=O5C65_000256 DALFDA020000002.1 Protein Homology CDS 41469 42461 . + 0 ID=cds-HJH9170443.1;Parent=gene-O5C65_000256;Dbxref=NCBI_GP:HJH9170443.1;Name=HJH9170443.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460653.1;locus_tag=O5C65_000256;product=peptide ABC transporter ATP-binding protein SapD;protein_id=HJH9170443.1;transl_table=11 DALFDA020000002.1 tpg gene 42463 43269 . + . ID=gene-O5C65_000257;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=O5C65_000257 DALFDA020000002.1 Protein Homology CDS 42463 43269 . + 0 ID=cds-HJH9170444.1;Parent=gene-O5C65_000257;Dbxref=NCBI_GP:HJH9170444.1;Name=HJH9170444.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460654.1;locus_tag=O5C65_000257;product=peptide ABC transporter ATP-binding protein SapF;protein_id=HJH9170444.1;transl_table=11 DALFDA020000002.1 tpg gene 43285 43992 . - . ID=gene-O5C65_000258;Name=O5C65_000258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000258 DALFDA020000002.1 Protein Homology CDS 43285 43992 . - 0 ID=cds-HJH9170445.1;Parent=gene-O5C65_000258;Dbxref=NCBI_GP:HJH9170445.1;Name=HJH9170445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748430.1;locus_tag=O5C65_000258;product=EAL domain-containing protein;protein_id=HJH9170445.1;transl_table=11 DALFDA020000002.1 tpg gene 44459 45832 . - . ID=gene-O5C65_000259;Name=steC;gbkey=Gene;gene=steC;gene_biotype=protein_coding;locus_tag=O5C65_000259 DALFDA020000002.1 Protein Homology CDS 44459 45832 . - 0 ID=cds-HJH9170446.1;Parent=gene-O5C65_000259;Dbxref=NCBI_GP:HJH9170446.1;Name=HJH9170446.1;gbkey=CDS;gene=steC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460656.1;locus_tag=O5C65_000259;product=SPI-2 type III secretion system effector kinase SteC;protein_id=HJH9170446.1;transl_table=11 DALFDA020000002.1 tpg gene 45867 46046 . + . ID=gene-O5C65_000260;Name=O5C65_000260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000260 DALFDA020000002.1 Protein Homology CDS 45867 46046 . + 0 ID=cds-HJH9170447.1;Parent=gene-O5C65_000260;Dbxref=NCBI_GP:HJH9170447.1;Name=HJH9170447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460657.1;locus_tag=O5C65_000260;product=hypothetical protein;protein_id=HJH9170447.1;transl_table=11 DALFDA020000002.1 tpg gene 46021 46320 . + . ID=gene-O5C65_000261;Name=O5C65_000261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000261 DALFDA020000002.1 Protein Homology CDS 46021 46320 . + 0 ID=cds-HJH9170448.1;Parent=gene-O5C65_000261;Dbxref=NCBI_GP:HJH9170448.1;Name=HJH9170448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460658.1;locus_tag=O5C65_000261;product=hypothetical protein;protein_id=HJH9170448.1;transl_table=11 DALFDA020000002.1 tpg gene 46438 47226 . + . ID=gene-O5C65_000262;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=O5C65_000262 DALFDA020000002.1 Protein Homology CDS 46438 47226 . + 0 ID=cds-HJH9170449.1;Parent=gene-O5C65_000262;Dbxref=NCBI_GP:HJH9170449.1;Name=HJH9170449.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=O5C65_000262;product=enoyl-ACP reductase FabI;protein_id=HJH9170449.1;transl_table=11 DALFDA020000002.1 tpg pseudogene 47426 48403 . + . ID=gene-O5C65_000263;Name=O5C65_000263;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_000263;pseudo=true DALFDA020000002.1 Protein Homology CDS 47426 48403 . + 0 ID=cds-O5C65_000263;Parent=gene-O5C65_000263;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460660.1;locus_tag=O5C65_000263;product=carboxymuconolactone decarboxylase family protein;pseudo=true;transl_table=11 DALFDA020000002.1 tpg gene 48648 50582 . + . ID=gene-O5C65_000264;Name=O5C65_000264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000264 DALFDA020000002.1 Protein Homology CDS 48648 50582 . + 0 ID=cds-HJH9170450.1;Parent=gene-O5C65_000264;Dbxref=NCBI_GP:HJH9170450.1;Name=HJH9170450.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460661.1;locus_tag=O5C65_000264;product=exoribonuclease II;protein_id=HJH9170450.1;transl_table=11 DALFDA020000002.1 tpg gene 50844 52826 . + . ID=gene-O5C65_000265;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=O5C65_000265 DALFDA020000002.1 Protein Homology CDS 50844 52826 . + 0 ID=cds-HJH9170451.1;Parent=gene-O5C65_000265;Dbxref=NCBI_GP:HJH9170451.1;Name=HJH9170451.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460662.1;locus_tag=O5C65_000265;product=cyclic di-GMP phosphodiesterase;protein_id=HJH9170451.1;transl_table=11 DALFDA020000002.1 tpg gene 52948 53127 . + . ID=gene-O5C65_000266;Name=O5C65_000266;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000266 DALFDA020000002.1 Protein Homology CDS 52948 53127 . + 0 ID=cds-HJH9170452.1;Parent=gene-O5C65_000266;Dbxref=NCBI_GP:HJH9170452.1;Name=HJH9170452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279854.1;locus_tag=O5C65_000266;product=hypothetical protein;protein_id=HJH9170452.1;transl_table=11 DALFDA020000002.1 tpg gene 53214 53966 . + . ID=gene-O5C65_000267;Name=O5C65_000267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000267 DALFDA020000002.1 Protein Homology CDS 53214 53966 . + 0 ID=cds-HJH9170453.1;Parent=gene-O5C65_000267;Dbxref=NCBI_GP:HJH9170453.1;Name=HJH9170453.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460663.1;locus_tag=O5C65_000267;product=DNA-binding transcriptional regulator YciT;protein_id=HJH9170453.1;transl_table=11 DALFDA020000002.1 tpg gene 54225 54443 . + . ID=gene-O5C65_000268;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=O5C65_000268 DALFDA020000002.1 Protein Homology CDS 54225 54443 . + 0 ID=cds-HJH9170454.1;Parent=gene-O5C65_000268;Dbxref=NCBI_GP:HJH9170454.1;Name=HJH9170454.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460664.1;locus_tag=O5C65_000268;product=osmotically-inducible lipoprotein OsmB;protein_id=HJH9170454.1;transl_table=11 DALFDA020000002.1 tpg gene 54563 54889 . - . ID=gene-O5C65_000269;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=O5C65_000269 DALFDA020000002.1 Protein Homology CDS 54563 54889 . - 0 ID=cds-HJH9170455.1;Parent=gene-O5C65_000269;Dbxref=NCBI_GP:HJH9170455.1;Name=HJH9170455.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460665.1;locus_tag=O5C65_000269;product=stress response translation initiation inhibitor YciH;protein_id=HJH9170455.1;transl_table=11 DALFDA020000002.1 tpg gene 54889 55626 . - . ID=gene-O5C65_000270;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=O5C65_000270 DALFDA020000002.1 Protein Homology CDS 54889 55626 . - 0 ID=cds-HJH9170456.1;Parent=gene-O5C65_000270;Dbxref=NCBI_GP:HJH9170456.1;Name=HJH9170456.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460666.1;locus_tag=O5C65_000270;product=orotidine-5'-phosphate decarboxylase;protein_id=HJH9170456.1;transl_table=11 DALFDA020000002.1 tpg gene 55817 56986 . - . ID=gene-O5C65_000271;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=O5C65_000271 DALFDA020000002.1 Protein Homology CDS 55817 56986 . - 0 ID=cds-HJH9170457.1;Parent=gene-O5C65_000271;Dbxref=NCBI_GP:HJH9170457.1;Name=HJH9170457.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=O5C65_000271;product=lipopolysaccharide assembly protein LapB;protein_id=HJH9170457.1;transl_table=11 DALFDA020000002.1 tpg gene 56993 57301 . - . ID=gene-O5C65_000272;Name=O5C65_000272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000272 DALFDA020000002.1 Protein Homology CDS 56993 57301 . - 0 ID=cds-HJH9170458.1;Parent=gene-O5C65_000272;Dbxref=NCBI_GP:HJH9170458.1;Name=HJH9170458.1;Ontology_term=GO:0008653,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460668.1;locus_tag=O5C65_000272;product=LapA family protein;protein_id=HJH9170458.1;transl_table=11 DALFDA020000002.1 tpg gene 57451 58215 . - . ID=gene-O5C65_000273;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=O5C65_000273 DALFDA020000002.1 Protein Homology CDS 57451 58215 . - 0 ID=cds-HJH9170459.1;Parent=gene-O5C65_000273;Dbxref=NCBI_GP:HJH9170459.1;Name=HJH9170459.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460669.1;locus_tag=O5C65_000273;product=phosphatidylglycerophosphatase B;protein_id=HJH9170459.1;transl_table=11 DALFDA020000002.1 tpg gene 58411 59001 . + . ID=gene-O5C65_000274;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=O5C65_000274 DALFDA020000002.1 Protein Homology CDS 58411 59001 . + 0 ID=cds-HJH9170460.1;Parent=gene-O5C65_000274;Dbxref=NCBI_GP:HJH9170460.1;Name=HJH9170460.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460670.1;locus_tag=O5C65_000274;product=GTP cyclohydrolase II;protein_id=HJH9170460.1;transl_table=11 DALFDA020000002.1 tpg gene 59057 61732 . - . ID=gene-O5C65_000275;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=O5C65_000275 DALFDA020000002.1 Protein Homology CDS 59057 61732 . - 0 ID=cds-HJH9170461.1;Parent=gene-O5C65_000275;Dbxref=NCBI_GP:HJH9170461.1;Name=HJH9170461.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460671.1;locus_tag=O5C65_000275;product=aconitate hydratase AcnA;protein_id=HJH9170461.1;transl_table=11 DALFDA020000002.1 tpg gene 61915 62007 . - . ID=gene-O5C65_000276;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=O5C65_000276 DALFDA020000002.1 Protein Homology CDS 61915 62007 . - 0 ID=cds-HJH9170462.1;Parent=gene-O5C65_000276;Dbxref=NCBI_GP:HJH9170462.1;Name=HJH9170462.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_226998799.1;locus_tag=O5C65_000276;product=small membrane protein YmiC;protein_id=HJH9170462.1;transl_table=11 DALFDA020000002.1 tpg gene 62288 62428 . - . ID=gene-O5C65_000277;Name=O5C65_000277;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000277 DALFDA020000002.1 Protein Homology CDS 62288 62428 . - 0 ID=cds-HJH9170463.1;Parent=gene-O5C65_000277;Dbxref=NCBI_GP:HJH9170463.1;Name=HJH9170463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=O5C65_000277;product=YmiA family putative membrane protein;protein_id=HJH9170463.1;transl_table=11 DALFDA020000002.1 tpg gene 62709 63683 . - . ID=gene-O5C65_000278;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=O5C65_000278 DALFDA020000002.1 Protein Homology CDS 62709 63683 . - 0 ID=cds-HJH9170464.1;Parent=gene-O5C65_000278;Dbxref=NCBI_GP:HJH9170464.1;Name=HJH9170464.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=O5C65_000278;product=HTH-type transcriptional regulator CysB;protein_id=HJH9170464.1;transl_table=11 DALFDA020000002.1 tpg gene 64094 66691 . - . ID=gene-O5C65_000279;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=O5C65_000279 DALFDA020000002.1 Protein Homology CDS 64094 66691 . - 0 ID=cds-HJH9170465.1;Parent=gene-O5C65_000279;Dbxref=NCBI_GP:HJH9170465.1;Name=HJH9170465.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=O5C65_000279;product=type I DNA topoisomerase;protein_id=HJH9170465.1;transl_table=11 DALFDA020000002.1 tpg gene 67094 67345 . + . ID=gene-O5C65_000280;Name=O5C65_000280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000280 DALFDA020000002.1 Protein Homology CDS 67094 67345 . + 0 ID=cds-HJH9170466.1;Parent=gene-O5C65_000280;Dbxref=NCBI_GP:HJH9170466.1;Name=HJH9170466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460674.1;locus_tag=O5C65_000280;product=YciN family protein;protein_id=HJH9170466.1;transl_table=11 DALFDA020000002.1 tpg gene 67387 68433 . - . ID=gene-O5C65_000281;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=O5C65_000281 DALFDA020000002.1 Protein Homology CDS 67387 68433 . - 0 ID=cds-HJH9170467.1;Parent=gene-O5C65_000281;Dbxref=NCBI_GP:HJH9170467.1;Name=HJH9170467.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460675.1;locus_tag=O5C65_000281;product=protease SohB;protein_id=HJH9170467.1;transl_table=11 DALFDA020000002.1 tpg gene 68671 69432 . + . ID=gene-O5C65_000282;Name=O5C65_000282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000282 DALFDA020000002.1 Protein Homology CDS 68671 69432 . + 0 ID=cds-HJH9170468.1;Parent=gene-O5C65_000282;Dbxref=NCBI_GP:HJH9170468.1;Name=HJH9170468.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460676.1;locus_tag=O5C65_000282;product=YciK family oxidoreductase;protein_id=HJH9170468.1;transl_table=11 DALFDA020000002.1 tpg gene 69429 70019 . + . ID=gene-O5C65_000283;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=O5C65_000283 DALFDA020000002.1 Protein Homology CDS 69429 70019 . + 0 ID=cds-HJH9170469.1;Parent=gene-O5C65_000283;Dbxref=NCBI_GP:HJH9170469.1;Name=HJH9170469.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460677.1;locus_tag=O5C65_000283;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=HJH9170469.1;transl_table=11 DALFDA020000002.1 tpg gene 70106 70981 . - . ID=gene-O5C65_000284;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=O5C65_000284 DALFDA020000002.1 Protein Homology CDS 70106 70981 . - 0 ID=cds-HJH9170470.1;Parent=gene-O5C65_000284;Dbxref=NCBI_GP:HJH9170470.1;Name=HJH9170470.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460678.1;locus_tag=O5C65_000284;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=HJH9170470.1;transl_table=11 DALFDA020000002.1 tpg gene 71082 71702 . - . ID=gene-O5C65_000285;Name=O5C65_000285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000285 DALFDA020000002.1 Protein Homology CDS 71082 71702 . - 0 ID=cds-HJH9170471.1;Parent=gene-O5C65_000285;Dbxref=NCBI_GP:HJH9170471.1;Name=HJH9170471.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=O5C65_000285;product=L-threonylcarbamoyladenylate synthase;protein_id=HJH9170471.1;transl_table=11 DALFDA020000002.1 tpg gene 71710 72591 . - . ID=gene-O5C65_000286;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=O5C65_000286 DALFDA020000002.1 Protein Homology CDS 71710 72591 . - 0 ID=cds-HJH9170472.1;Parent=gene-O5C65_000286;Dbxref=NCBI_GP:HJH9170472.1;Name=HJH9170472.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460680.1;locus_tag=O5C65_000286;product=RNase RNM;protein_id=HJH9170472.1;transl_table=11 DALFDA020000002.1 tpg gene 72713 72757 . + . ID=gene-O5C65_000287;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=O5C65_000287 DALFDA020000002.1 Protein Homology CDS 72713 72757 . + 0 ID=cds-HJH9170473.1;Parent=gene-O5C65_000287;Dbxref=NCBI_GP:HJH9170473.1;Name=HJH9170473.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448140.1;locus_tag=O5C65_000287;product=trp operon leader peptide;protein_id=HJH9170473.1;transl_table=11 DALFDA020000002.1 cmsearch sequence_feature 72734 72829 . + . ID=id-DALFDA020000002.1:72734..72829;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 DALFDA020000002.1 tpg gene 72852 74414 . + . ID=gene-O5C65_000288;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=O5C65_000288 DALFDA020000002.1 Protein Homology CDS 72852 74414 . + 0 ID=cds-HJH9170474.1;Parent=gene-O5C65_000288;Dbxref=NCBI_GP:HJH9170474.1;Name=HJH9170474.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460682.1;locus_tag=O5C65_000288;product=anthranilate synthase component I;protein_id=HJH9170474.1;transl_table=11 DALFDA020000002.1 tpg gene 74414 76009 . + . ID=gene-O5C65_000289;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=O5C65_000289 DALFDA020000002.1 Protein Homology CDS 74414 76009 . + 0 ID=cds-HJH9170475.1;Parent=gene-O5C65_000289;Dbxref=NCBI_GP:HJH9170475.1;Name=HJH9170475.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=O5C65_000289;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=HJH9170475.1;transl_table=11 DALFDA020000002.1 tpg gene 76013 77371 . + . ID=gene-O5C65_000290;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=O5C65_000290 DALFDA020000002.1 Protein Homology CDS 76013 77371 . + 0 ID=cds-HJH9170476.1;Parent=gene-O5C65_000290;Dbxref=NCBI_GP:HJH9170476.1;Name=HJH9170476.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460684.1;locus_tag=O5C65_000290;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=HJH9170476.1;transl_table=11 DALFDA020000002.1 tpg gene 77381 78574 . + . ID=gene-O5C65_000291;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=O5C65_000291 DALFDA020000002.1 Protein Homology CDS 77381 78574 . + 0 ID=cds-HJH9170477.1;Parent=gene-O5C65_000291;Dbxref=NCBI_GP:HJH9170477.1;Name=HJH9170477.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460685.1;locus_tag=O5C65_000291;product=tryptophan synthase subunit beta;protein_id=HJH9170477.1;transl_table=11 DALFDA020000002.1 tpg gene 78574 79380 . + . ID=gene-O5C65_000292;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=O5C65_000292 DALFDA020000002.1 Protein Homology CDS 78574 79380 . + 0 ID=cds-HJH9170478.1;Parent=gene-O5C65_000292;Dbxref=NCBI_GP:HJH9170478.1;Name=HJH9170478.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460686.1;locus_tag=O5C65_000292;product=tryptophan synthase subunit alpha;protein_id=HJH9170478.1;transl_table=11 DALFDA020000002.1 tpg gene 79860 80042 . + . ID=gene-O5C65_000293;Name=O5C65_000293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000293 DALFDA020000002.1 Protein Homology CDS 79860 80042 . + 0 ID=cds-HJH9170479.1;Parent=gene-O5C65_000293;Dbxref=NCBI_GP:HJH9170479.1;Name=HJH9170479.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460687.1;locus_tag=O5C65_000293;product=general stress protein;protein_id=HJH9170479.1;transl_table=11 DALFDA020000002.1 tpg gene 80132 80635 . + . ID=gene-O5C65_000294;Name=O5C65_000294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000294 DALFDA020000002.1 Protein Homology CDS 80132 80635 . + 0 ID=cds-HJH9170480.1;Parent=gene-O5C65_000294;Dbxref=NCBI_GP:HJH9170480.1;Name=HJH9170480.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460688.1;locus_tag=O5C65_000294;product=ferritin-like domain-containing protein;protein_id=HJH9170480.1;transl_table=11 DALFDA020000002.1 tpg gene 80709 81215 . + . ID=gene-O5C65_000295;Name=O5C65_000295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000295 DALFDA020000002.1 Protein Homology CDS 80709 81215 . + 0 ID=cds-HJH9170481.1;Parent=gene-O5C65_000295;Dbxref=NCBI_GP:HJH9170481.1;Name=HJH9170481.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460689.1;locus_tag=O5C65_000295;product=ferritin-like domain-containing protein;protein_id=HJH9170481.1;transl_table=11 DALFDA020000002.1 tpg gene 81235 82113 . + . ID=gene-O5C65_000296;Name=O5C65_000296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000296 DALFDA020000002.1 Protein Homology CDS 81235 82113 . + 0 ID=cds-HJH9170482.1;Parent=gene-O5C65_000296;Dbxref=NCBI_GP:HJH9170482.1;Name=HJH9170482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460690.1;locus_tag=O5C65_000296;product=manganese catalase family protein;protein_id=HJH9170482.1;transl_table=11 DALFDA020000002.1 tpg gene 82195 82833 . - . ID=gene-O5C65_000297;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=O5C65_000297 DALFDA020000002.1 Protein Homology CDS 82195 82833 . - 0 ID=cds-HJH9170483.1;Parent=gene-O5C65_000297;Dbxref=NCBI_GP:HJH9170483.1;Name=HJH9170483.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460691.1;locus_tag=O5C65_000297;product=outer membrane protein OmpW;protein_id=HJH9170483.1;transl_table=11 DALFDA020000002.1 tpg gene 83169 83573 . + . ID=gene-O5C65_000298;Name=O5C65_000298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000298 DALFDA020000002.1 Protein Homology CDS 83169 83573 . + 0 ID=cds-HJH9170484.1;Parent=gene-O5C65_000298;Dbxref=NCBI_GP:HJH9170484.1;Name=HJH9170484.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=O5C65_000298;product=YkgJ family cysteine cluster protein;protein_id=HJH9170484.1;transl_table=11 DALFDA020000002.1 tpg gene 83599 84342 . + . ID=gene-O5C65_000299;Name=O5C65_000299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000299 DALFDA020000002.1 Protein Homology CDS 83599 84342 . + 0 ID=cds-HJH9170485.1;Parent=gene-O5C65_000299;Dbxref=NCBI_GP:HJH9170485.1;Name=HJH9170485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460693.1;locus_tag=O5C65_000299;product=YciC family protein;protein_id=HJH9170485.1;transl_table=11 DALFDA020000002.1 tpg gene 84399 84938 . + . ID=gene-O5C65_000300;Name=O5C65_000300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000300 DALFDA020000002.1 Protein Homology CDS 84399 84938 . + 0 ID=cds-HJH9170486.1;Parent=gene-O5C65_000300;Dbxref=NCBI_GP:HJH9170486.1;Name=HJH9170486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460694.1;locus_tag=O5C65_000300;product=septation protein A;protein_id=HJH9170486.1;transl_table=11 DALFDA020000002.1 tpg gene 85099 85500 . + . ID=gene-O5C65_000301;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=O5C65_000301 DALFDA020000002.1 Protein Homology CDS 85099 85500 . + 0 ID=cds-HJH9170487.1;Parent=gene-O5C65_000301;Dbxref=NCBI_GP:HJH9170487.1;Name=HJH9170487.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460695.1;locus_tag=O5C65_000301;product=acyl-CoA thioester hydrolase YciA;protein_id=HJH9170487.1;transl_table=11 DALFDA020000002.1 tpg gene 85560 86288 . - . ID=gene-O5C65_000302;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=O5C65_000302 DALFDA020000002.1 Protein Homology CDS 85560 86288 . - 0 ID=cds-HJH9170488.1;Parent=gene-O5C65_000302;Dbxref=NCBI_GP:HJH9170488.1;Name=HJH9170488.1;Ontology_term=GO:0015891,GO:0055085,GO:0015343,GO:0030288;gbkey=CDS;gene=tonB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460696.1;locus_tag=O5C65_000302;product=TonB system transport protein TonB;protein_id=HJH9170488.1;transl_table=11 DALFDA020000002.1 tpg gene 86512 86808 . + . ID=gene-O5C65_000303;Name=O5C65_000303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000303 DALFDA020000002.1 Protein Homology CDS 86512 86808 . + 0 ID=cds-HJH9170489.1;Parent=gene-O5C65_000303;Dbxref=NCBI_GP:HJH9170489.1;Name=HJH9170489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460697.1;locus_tag=O5C65_000303;product=YciI family protein;protein_id=HJH9170489.1;transl_table=11 DALFDA020000002.1 tpg gene 86852 87025 . - . ID=gene-O5C65_000304;Name=O5C65_000304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000304 DALFDA020000002.1 Protein Homology CDS 86852 87025 . - 0 ID=cds-HJH9170490.1;Parent=gene-O5C65_000304;Dbxref=NCBI_GP:HJH9170490.1;Name=HJH9170490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=O5C65_000304;product=YciY family protein;protein_id=HJH9170490.1;transl_table=11 DALFDA020000002.1 tpg gene 87168 88628 . + . ID=gene-O5C65_000305;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=O5C65_000305 DALFDA020000002.1 Protein Homology CDS 87168 88628 . + 0 ID=cds-HJH9170491.1;Parent=gene-O5C65_000305;Dbxref=NCBI_GP:HJH9170491.1;Name=HJH9170491.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=O5C65_000305;product=cardiolipin synthase;protein_id=HJH9170491.1;transl_table=11 DALFDA020000002.1 tpg gene 88662 88991 . + . ID=gene-O5C65_000306;Name=O5C65_000306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000306 DALFDA020000002.1 Protein Homology CDS 88662 88991 . + 0 ID=cds-HJH9170492.1;Parent=gene-O5C65_000306;Dbxref=NCBI_GP:HJH9170492.1;Name=HJH9170492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448158.1;locus_tag=O5C65_000306;product=HI1450 family dsDNA-mimic protein;protein_id=HJH9170492.1;transl_table=11 DALFDA020000002.1 tpg gene 89039 89875 . - . ID=gene-O5C65_000307;Name=O5C65_000307;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000307 DALFDA020000002.1 Protein Homology CDS 89039 89875 . - 0 ID=cds-HJH9170493.1;Parent=gene-O5C65_000307;Dbxref=NCBI_GP:HJH9170493.1;Name=HJH9170493.1;Ontology_term=GO:0006811,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460700.1;locus_tag=O5C65_000307;product=ion transporter;protein_id=HJH9170493.1;transl_table=11 DALFDA020000002.1 tpg gene 89923 90927 . - . ID=gene-O5C65_000308;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=O5C65_000308 DALFDA020000002.1 Protein Homology CDS 89923 90927 . - 0 ID=cds-HJH9170494.1;Parent=gene-O5C65_000308;Dbxref=NCBI_GP:HJH9170494.1;Name=HJH9170494.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506804.1;locus_tag=O5C65_000308;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=HJH9170494.1;transl_table=11 DALFDA020000002.1 tpg gene 90924 91931 . - . ID=gene-O5C65_000309;Name=O5C65_000309;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000309 DALFDA020000002.1 Protein Homology CDS 90924 91931 . - 0 ID=cds-HJH9170495.1;Parent=gene-O5C65_000309;Dbxref=NCBI_GP:HJH9170495.1;Name=HJH9170495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460702.1;locus_tag=O5C65_000309;product=ABC transporter ATP-binding protein;protein_id=HJH9170495.1;transl_table=11 DALFDA020000002.1 tpg gene 91943 92851 . - . ID=gene-O5C65_000310;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=O5C65_000310 DALFDA020000002.1 Protein Homology CDS 91943 92851 . - 0 ID=cds-HJH9170496.1;Parent=gene-O5C65_000310;Dbxref=NCBI_GP:HJH9170496.1;Name=HJH9170496.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=O5C65_000310;product=oligopeptide ABC transporter permease OppC;protein_id=HJH9170496.1;transl_table=11 DALFDA020000002.1 tpg gene 92866 93786 . - . ID=gene-O5C65_000311;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=O5C65_000311 DALFDA020000002.1 Protein Homology CDS 92866 93786 . - 0 ID=cds-HJH9170497.1;Parent=gene-O5C65_000311;Dbxref=NCBI_GP:HJH9170497.1;Name=HJH9170497.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=O5C65_000311;product=oligopeptide ABC transporter permease OppB;protein_id=HJH9170497.1;transl_table=11 DALFDA020000002.1 tpg gene 93908 95539 . - . ID=gene-O5C65_000312;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=O5C65_000312 DALFDA020000002.1 Protein Homology CDS 93908 95539 . - 0 ID=cds-HJH9170498.1;Parent=gene-O5C65_000312;Dbxref=NCBI_GP:HJH9170498.1;Name=HJH9170498.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001672805.1;locus_tag=O5C65_000312;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=HJH9170498.1;transl_table=11 DALFDA020000002.1 tpg gene 96328 96975 . - . ID=gene-O5C65_000313;Name=O5C65_000313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000313 DALFDA020000002.1 Protein Homology CDS 96328 96975 . - 0 ID=cds-HJH9170499.1;Parent=gene-O5C65_000313;Dbxref=NCBI_GP:HJH9170499.1;Name=HJH9170499.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460707.1;locus_tag=O5C65_000313;product=YchE family NAAT transporter;protein_id=HJH9170499.1;transl_table=11 DALFDA020000002.1 tpg gene 97452 100130 . + . ID=gene-O5C65_000314;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=O5C65_000314 DALFDA020000002.1 Protein Homology CDS 97452 100130 . + 0 ID=cds-HJH9170500.1;Parent=gene-O5C65_000314;Dbxref=NCBI_GP:HJH9170500.1;Name=HJH9170500.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=O5C65_000314;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=HJH9170500.1;transl_table=11 DALFDA020000002.1 tpg gene 100327 100944 . - . ID=gene-O5C65_000315;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=O5C65_000315 DALFDA020000002.1 Protein Homology CDS 100327 100944 . - 0 ID=cds-HJH9170501.1;Parent=gene-O5C65_000315;Dbxref=NCBI_GP:HJH9170501.1;Name=HJH9170501.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460709.1;locus_tag=O5C65_000315;product=thymidine kinase;protein_id=HJH9170501.1;transl_table=11 DALFDA020000002.1 tpg gene 101607 102020 . + . ID=gene-O5C65_000316;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=O5C65_000316 DALFDA020000002.1 Protein Homology CDS 101607 102020 . + 0 ID=cds-HJH9170502.1;Parent=gene-O5C65_000316;Dbxref=NCBI_GP:HJH9170502.1;Name=HJH9170502.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460710.1;locus_tag=O5C65_000316;product=histone-like nucleoid-structuring protein H-NS;protein_id=HJH9170502.1;transl_table=11 DALFDA020000002.1 tpg gene 102152 103060 . - . ID=gene-O5C65_000317;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=O5C65_000317 DALFDA020000002.1 Protein Homology CDS 102152 103060 . - 0 ID=cds-HJH9170503.1;Parent=gene-O5C65_000317;Dbxref=NCBI_GP:HJH9170503.1;Name=HJH9170503.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460711.1;locus_tag=O5C65_000317;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=HJH9170503.1;transl_table=11 DALFDA020000002.1 tpg gene 103263 104276 . - . ID=gene-O5C65_000318;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=O5C65_000318 DALFDA020000002.1 Protein Homology CDS 103263 104276 . - 0 ID=cds-HJH9170504.1;Parent=gene-O5C65_000318;Dbxref=NCBI_GP:HJH9170504.1;Name=HJH9170504.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460712.1;locus_tag=O5C65_000318;product=two-component system response regulator RssB;protein_id=HJH9170504.1;transl_table=11 DALFDA020000002.1 tpg gene 104367 105272 . - . ID=gene-O5C65_000319;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=O5C65_000319 DALFDA020000002.1 Protein Homology CDS 104367 105272 . - 0 ID=cds-HJH9170505.1;Parent=gene-O5C65_000319;Dbxref=NCBI_GP:HJH9170505.1;Name=HJH9170505.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460713.1;locus_tag=O5C65_000319;product=patatin-like phospholipase RssA;protein_id=HJH9170505.1;transl_table=11 DALFDA020000002.1 tpg gene 105383 105841 . + . ID=gene-O5C65_000320;Name=O5C65_000320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000320 DALFDA020000002.1 Protein Homology CDS 105383 105841 . + 0 ID=cds-HJH9170506.1;Parent=gene-O5C65_000320;Dbxref=NCBI_GP:HJH9170506.1;Name=HJH9170506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460714.1;locus_tag=O5C65_000320;product=YchJ family protein;protein_id=HJH9170506.1;transl_table=11 DALFDA020000002.1 tpg gene 105892 106734 . + . ID=gene-O5C65_000321;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=O5C65_000321 DALFDA020000002.1 Protein Homology CDS 105892 106734 . + 0 ID=cds-HJH9170507.1;Parent=gene-O5C65_000321;Dbxref=NCBI_GP:HJH9170507.1;Name=HJH9170507.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460715.1;locus_tag=O5C65_000321;product=formyltetrahydrofolate deformylase;protein_id=HJH9170507.1;transl_table=11 DALFDA020000002.1 tpg gene 106905 107046 . + . ID=gene-O5C65_000322;Name=O5C65_000322;gbkey=Gene;gene_biotype=ncRNA;locus_tag=O5C65_000322 DALFDA020000002.1 cmsearch ncRNA 106905 107046 . + . ID=rna-O5C65_000322;Parent=gene-O5C65_000322;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_000322;product=RtT sRNA DALFDA020000002.1 cmsearch exon 106905 107046 . + . ID=exon-O5C65_000322-1;Parent=rna-O5C65_000322;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_000322;product=RtT sRNA DALFDA020000002.1 tpg gene 107075 107159 . + . ID=gene-O5C65_000323;Name=O5C65_000323;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_000323 DALFDA020000002.1 tRNAscan-SE tRNA 107075 107159 . + . ID=rna-O5C65_000323;Parent=gene-O5C65_000323;anticodon=(pos:107109..107111);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_000323;product=tRNA-Tyr DALFDA020000002.1 tRNAscan-SE exon 107075 107159 . + . ID=exon-O5C65_000323-1;Parent=rna-O5C65_000323;anticodon=(pos:107109..107111);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_000323;product=tRNA-Tyr DALFDA020000002.1 tpg gene 107204 107335 . + . ID=gene-O5C65_000324;Name=O5C65_000324;gbkey=Gene;gene_biotype=ncRNA;locus_tag=O5C65_000324 DALFDA020000002.1 cmsearch ncRNA 107204 107335 . + . ID=rna-O5C65_000324;Parent=gene-O5C65_000324;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_000324;product=RtT sRNA DALFDA020000002.1 cmsearch exon 107204 107335 . + . ID=exon-O5C65_000324-1;Parent=rna-O5C65_000324;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_000324;product=RtT sRNA DALFDA020000002.1 tpg gene 107370 107454 . + . ID=gene-O5C65_000325;Name=O5C65_000325;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_000325 DALFDA020000002.1 tRNAscan-SE tRNA 107370 107454 . + . ID=rna-O5C65_000325;Parent=gene-O5C65_000325;anticodon=(pos:107404..107406);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_000325;product=tRNA-Tyr DALFDA020000002.1 tRNAscan-SE exon 107370 107454 . + . ID=exon-O5C65_000325-1;Parent=rna-O5C65_000325;anticodon=(pos:107404..107406);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_000325;product=tRNA-Tyr DALFDA020000002.1 tpg gene 107498 107629 . + . ID=gene-O5C65_000326;Name=O5C65_000326;gbkey=Gene;gene_biotype=ncRNA;locus_tag=O5C65_000326 DALFDA020000002.1 cmsearch ncRNA 107498 107629 . + . ID=rna-O5C65_000326;Parent=gene-O5C65_000326;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_000326;product=RtT sRNA DALFDA020000002.1 cmsearch exon 107498 107629 . + . ID=exon-O5C65_000326-1;Parent=rna-O5C65_000326;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_000326;product=RtT sRNA DALFDA020000002.1 tpg gene 107673 107803 . + . ID=gene-O5C65_000327;Name=O5C65_000327;gbkey=Gene;gene_biotype=ncRNA;locus_tag=O5C65_000327 DALFDA020000002.1 cmsearch ncRNA 107673 107803 . + . ID=rna-O5C65_000327;Parent=gene-O5C65_000327;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_000327;product=RtT sRNA DALFDA020000002.1 cmsearch exon 107673 107803 . + . ID=exon-O5C65_000327-1;Parent=rna-O5C65_000327;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_000327;product=RtT sRNA DALFDA020000002.1 tpg gene 107848 107979 . + . ID=gene-O5C65_000328;Name=O5C65_000328;gbkey=Gene;gene_biotype=ncRNA;locus_tag=O5C65_000328 DALFDA020000002.1 cmsearch ncRNA 107848 107979 . + . ID=rna-O5C65_000328;Parent=gene-O5C65_000328;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_000328;product=RtT sRNA DALFDA020000002.1 cmsearch exon 107848 107979 . + . ID=exon-O5C65_000328-1;Parent=rna-O5C65_000328;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_000328;product=RtT sRNA DALFDA020000002.1 tpg gene 108082 109611 . - . ID=gene-O5C65_000329;Name=O5C65_000329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000329 DALFDA020000002.1 Protein Homology CDS 108082 109611 . - 0 ID=cds-HJH9170508.1;Parent=gene-O5C65_000329;Dbxref=NCBI_GP:HJH9170508.1;Name=HJH9170508.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460716.1;locus_tag=O5C65_000329;product=tetratricopeptide repeat protein;protein_id=HJH9170508.1;transl_table=11 DALFDA020000002.1 tpg gene 109853 110530 . - . ID=gene-O5C65_000330;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=O5C65_000330 DALFDA020000002.1 Protein Homology CDS 109853 110530 . - 0 ID=cds-HJH9170509.1;Parent=gene-O5C65_000330;Dbxref=NCBI_GP:HJH9170509.1;Name=HJH9170509.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460717.1;locus_tag=O5C65_000330;product=respiratory nitrate reductase subunit gamma;protein_id=HJH9170509.1;transl_table=11 DALFDA020000002.1 tpg gene 110530 111240 . - . ID=gene-O5C65_000331;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=O5C65_000331 DALFDA020000002.1 Protein Homology CDS 110530 111240 . - 0 ID=cds-HJH9170510.1;Parent=gene-O5C65_000331;Dbxref=NCBI_GP:HJH9170510.1;Name=HJH9170510.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460718.1;locus_tag=O5C65_000331;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=HJH9170510.1;transl_table=11 DALFDA020000002.1 tpg gene 111237 112772 . - . ID=gene-O5C65_000332;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=O5C65_000332 DALFDA020000002.1 Protein Homology CDS 111237 112772 . - 0 ID=cds-HJH9170511.1;Parent=gene-O5C65_000332;Dbxref=NCBI_GP:HJH9170511.1;Name=HJH9170511.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460719.1;locus_tag=O5C65_000332;product=nitrate reductase subunit beta;protein_id=HJH9170511.1;transl_table=11 DALFDA020000002.1 tpg gene 112769 116512 . - . ID=gene-O5C65_000333;Name=O5C65_000333;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000333 DALFDA020000002.1 Protein Homology CDS 112769 116512 . - 0 ID=cds-HJH9170512.1;Parent=gene-O5C65_000333;Dbxref=NCBI_GP:HJH9170512.1;Name=HJH9170512.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=O5C65_000333;product=nitrate reductase subunit alpha;protein_id=HJH9170512.1;transl_table=11 DALFDA020000002.1 tpg gene 116900 118297 . - . ID=gene-O5C65_000334;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=O5C65_000334 DALFDA020000002.1 Protein Homology CDS 116900 118297 . - 0 ID=cds-HJH9170513.1;Parent=gene-O5C65_000334;Dbxref=NCBI_GP:HJH9170513.1;Name=HJH9170513.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460721.1;locus_tag=O5C65_000334;product=nitrate transporter NarK;protein_id=HJH9170513.1;transl_table=11 DALFDA020000002.1 tpg gene 118638 120434 . + . ID=gene-O5C65_000335;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=O5C65_000335 DALFDA020000002.1 Protein Homology CDS 118638 120434 . + 0 ID=cds-HJH9170514.1;Parent=gene-O5C65_000335;Dbxref=NCBI_GP:HJH9170514.1;Name=HJH9170514.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460722.1;locus_tag=O5C65_000335;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=HJH9170514.1;transl_table=11 DALFDA020000002.1 tpg gene 120427 121077 . + . ID=gene-O5C65_000336;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=O5C65_000336 DALFDA020000002.1 Protein Homology CDS 120427 121077 . + 0 ID=cds-HJH9170515.1;Parent=gene-O5C65_000336;Dbxref=NCBI_GP:HJH9170515.1;Name=HJH9170515.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460723.1;locus_tag=O5C65_000336;product=two-component system response regulator NarL;protein_id=HJH9170515.1;transl_table=11 DALFDA020000002.1 tpg gene 121078 122502 . - . ID=gene-O5C65_000337;Name=O5C65_000337;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000337 DALFDA020000002.1 Protein Homology CDS 121078 122502 . - 0 ID=cds-HJH9170516.1;Parent=gene-O5C65_000337;Dbxref=NCBI_GP:HJH9170516.1;Name=HJH9170516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460724.3;locus_tag=O5C65_000337;product=YchO/YchP family invasin;protein_id=HJH9170516.1;transl_table=11 DALFDA020000002.1 tpg gene 122679 123032 . + . ID=gene-O5C65_000338;Name=O5C65_000338;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000338 DALFDA020000002.1 Protein Homology CDS 122679 123032 . + 0 ID=cds-HJH9170517.1;Parent=gene-O5C65_000338;Dbxref=NCBI_GP:HJH9170517.1;Name=HJH9170517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460725.1;locus_tag=O5C65_000338;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=HJH9170517.1;transl_table=11 DALFDA020000002.1 tpg gene 123112 123342 . - . ID=gene-O5C65_000339;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=O5C65_000339 DALFDA020000002.1 Protein Homology CDS 123112 123342 . - 0 ID=cds-HJH9170518.1;Parent=gene-O5C65_000339;Dbxref=NCBI_GP:HJH9170518.1;Name=HJH9170518.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460726.1;locus_tag=O5C65_000339;product=putative cation transport regulator ChaB;protein_id=HJH9170518.1;transl_table=11 DALFDA020000002.1 tpg gene 123609 124709 . + . ID=gene-O5C65_000340;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=O5C65_000340 DALFDA020000002.1 Protein Homology CDS 123609 124709 . + 0 ID=cds-HJH9170519.1;Parent=gene-O5C65_000340;Dbxref=NCBI_GP:HJH9170519.1;Name=HJH9170519.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460727.1;locus_tag=O5C65_000340;product=sodium-potassium/proton antiporter ChaA;protein_id=HJH9170519.1;transl_table=11 DALFDA020000002.1 tpg gene 124763 125617 . - . ID=gene-O5C65_000341;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=O5C65_000341 DALFDA020000002.1 Protein Homology CDS 124763 125617 . - 0 ID=cds-HJH9170520.1;Parent=gene-O5C65_000341;Dbxref=NCBI_GP:HJH9170520.1;Name=HJH9170520.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460728.1;locus_tag=O5C65_000341;product=3-deoxy-8-phosphooctulonate synthase;protein_id=HJH9170520.1;transl_table=11 DALFDA020000002.1 tpg gene 125655 126464 . - . ID=gene-O5C65_000342;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=O5C65_000342 DALFDA020000002.1 Protein Homology CDS 125655 126464 . - 0 ID=cds-HJH9170521.1;Parent=gene-O5C65_000342;Dbxref=NCBI_GP:HJH9170521.1;Name=HJH9170521.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460729.1;locus_tag=O5C65_000342;product=invasion regulator SirB1;protein_id=HJH9170521.1;transl_table=11 DALFDA020000002.1 tpg gene 126468 126857 . - . ID=gene-O5C65_000343;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=O5C65_000343 DALFDA020000002.1 Protein Homology CDS 126468 126857 . - 0 ID=cds-HJH9170522.1;Parent=gene-O5C65_000343;Dbxref=NCBI_GP:HJH9170522.1;Name=HJH9170522.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460730.1;locus_tag=O5C65_000343;product=invasion regulator SirB2;protein_id=HJH9170522.1;transl_table=11 DALFDA020000002.1 tpg gene 126854 127687 . - . ID=gene-O5C65_000344;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=O5C65_000344 DALFDA020000002.1 Protein Homology CDS 126854 127687 . - 0 ID=cds-HJH9170523.1;Parent=gene-O5C65_000344;Dbxref=NCBI_GP:HJH9170523.1;Name=HJH9170523.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460731.1;locus_tag=O5C65_000344;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=HJH9170523.1;transl_table=11 DALFDA020000002.1 tpg gene 127687 128769 . - . ID=gene-O5C65_000345;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=O5C65_000345 DALFDA020000002.1 Protein Homology CDS 127687 128769 . - 0 ID=cds-HJH9170524.1;Parent=gene-O5C65_000345;Dbxref=NCBI_GP:HJH9170524.1;Name=HJH9170524.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=O5C65_000345;product=peptide chain release factor 1;protein_id=HJH9170524.1;transl_table=11 DALFDA020000002.1 tpg gene 128810 130066 . - . ID=gene-O5C65_000346;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=O5C65_000346 DALFDA020000002.1 Protein Homology CDS 128810 130066 . - 0 ID=cds-HJH9170525.1;Parent=gene-O5C65_000346;Dbxref=NCBI_GP:HJH9170525.1;Name=HJH9170525.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=O5C65_000346;product=glutamyl-tRNA reductase;protein_id=HJH9170525.1;transl_table=11 DALFDA020000002.1 tpg gene 130380 131003 . + . ID=gene-O5C65_000347;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=O5C65_000347 DALFDA020000002.1 Protein Homology CDS 130380 131003 . + 0 ID=cds-HJH9170526.1;Parent=gene-O5C65_000347;Dbxref=NCBI_GP:HJH9170526.1;Name=HJH9170526.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460734.1;locus_tag=O5C65_000347;product=lipoprotein insertase outer membrane protein LolB;protein_id=HJH9170526.1;transl_table=11 DALFDA020000002.1 tpg gene 131000 131851 . + . ID=gene-O5C65_000348;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=O5C65_000348 DALFDA020000002.1 Protein Homology CDS 131000 131851 . + 0 ID=cds-HJH9170527.1;Parent=gene-O5C65_000348;Dbxref=NCBI_GP:HJH9170527.1;Name=HJH9170527.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460735.1;locus_tag=O5C65_000348;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=HJH9170527.1;transl_table=11 DALFDA020000002.1 tpg gene 132117 133064 . + . ID=gene-O5C65_000349;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=O5C65_000349 DALFDA020000002.1 Protein Homology CDS 132117 133064 . + 0 ID=cds-HJH9170528.1;Parent=gene-O5C65_000349;Dbxref=NCBI_GP:HJH9170528.1;Name=HJH9170528.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=O5C65_000349;product=ribose-phosphate diphosphokinase;protein_id=HJH9170528.1;transl_table=11 DALFDA020000002.1 tpg gene 133189 134874 . + . ID=gene-O5C65_000350;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=O5C65_000350 DALFDA020000002.1 Protein Homology CDS 133189 134874 . + 0 ID=cds-HJH9170529.1;Parent=gene-O5C65_000350;Dbxref=NCBI_GP:HJH9170529.1;Name=HJH9170529.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525165.1;locus_tag=O5C65_000350;product=C4-dicarboxylic acid transporter DauA;protein_id=HJH9170529.1;transl_table=11 DALFDA020000002.1 tpg gene 134919 135197 . - . ID=gene-O5C65_000351;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=O5C65_000351 DALFDA020000002.1 Protein Homology CDS 134919 135197 . - 0 ID=cds-HJH9170530.1;Parent=gene-O5C65_000351;Dbxref=NCBI_GP:HJH9170530.1;Name=HJH9170530.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460738.1;locus_tag=O5C65_000351;product=stress-induced protein YchH;protein_id=HJH9170530.1;transl_table=11 DALFDA020000002.1 tpg gene 135473 136057 . + . ID=gene-O5C65_000352;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=O5C65_000352 DALFDA020000002.1 Protein Homology CDS 135473 136057 . + 0 ID=cds-HJH9170531.1;Parent=gene-O5C65_000352;Dbxref=NCBI_GP:HJH9170531.1;Name=HJH9170531.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=O5C65_000352;product=aminoacyl-tRNA hydrolase;protein_id=HJH9170531.1;transl_table=11 DALFDA020000002.1 tpg gene 136174 137265 . + . ID=gene-O5C65_000353;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=O5C65_000353 DALFDA020000002.1 Protein Homology CDS 136174 137265 . + 0 ID=cds-HJH9170532.1;Parent=gene-O5C65_000353;Dbxref=NCBI_GP:HJH9170532.1;Name=HJH9170532.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=O5C65_000353;product=redox-regulated ATPase YchF;protein_id=HJH9170532.1;transl_table=11 DALFDA020000002.1 tpg gene 138024 138644 . + . ID=gene-O5C65_000354;Name=O5C65_000354;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000354 DALFDA020000002.1 Protein Homology CDS 138024 138644 . + 0 ID=cds-HJH9170533.1;Parent=gene-O5C65_000354;Dbxref=NCBI_GP:HJH9170533.1;Name=HJH9170533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376822.1;locus_tag=O5C65_000354;product=hypothetical protein;protein_id=HJH9170533.1;transl_table=11 DALFDA020000002.1 tpg gene 138683 139138 . + . ID=gene-O5C65_000355;Name=O5C65_000355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000355 DALFDA020000002.1 Protein Homology CDS 138683 139138 . + 0 ID=cds-HJH9170534.1;Parent=gene-O5C65_000355;Dbxref=NCBI_GP:HJH9170534.1;Name=HJH9170534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000487332.1;locus_tag=O5C65_000355;product=hypothetical protein;protein_id=HJH9170534.1;transl_table=11 DALFDA020000002.1 tpg gene 139614 140879 . - . ID=gene-O5C65_000356;Name=O5C65_000356;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000356 DALFDA020000002.1 Protein Homology CDS 139614 140879 . - 0 ID=cds-HJH9170535.1;Parent=gene-O5C65_000356;Dbxref=NCBI_GP:HJH9170535.1;Name=HJH9170535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460741.1;locus_tag=O5C65_000356;product=DUF4427 domain-containing protein;protein_id=HJH9170535.1;transl_table=11 DALFDA020000002.1 tpg gene 141374 142492 . + . ID=gene-O5C65_000357;Name=hyaA;gbkey=Gene;gene=hyaA;gene_biotype=protein_coding;locus_tag=O5C65_000357 DALFDA020000002.1 Protein Homology CDS 141374 142492 . + 0 ID=cds-HJH9170536.1;Parent=gene-O5C65_000357;Dbxref=NCBI_GP:HJH9170536.1;Name=HJH9170536.1;gbkey=CDS;gene=hyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460742.1;locus_tag=O5C65_000357;product=hydrogenase 1 small subunit;protein_id=HJH9170536.1;transl_table=11 DALFDA020000002.1 tpg gene 142489 144282 . + . ID=gene-O5C65_000358;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=O5C65_000358 DALFDA020000002.1 Protein Homology CDS 142489 144282 . + 0 ID=cds-HJH9170537.1;Parent=gene-O5C65_000358;Dbxref=NCBI_GP:HJH9170537.1;Name=HJH9170537.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460743.1;locus_tag=O5C65_000358;product=Ni/Fe-hydrogenase large subunit;protein_id=HJH9170537.1;transl_table=11 DALFDA020000002.1 tpg gene 144301 145032 . + . ID=gene-O5C65_000359;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=O5C65_000359 DALFDA020000002.1 Protein Homology CDS 144301 145032 . + 0 ID=cds-HJH9170538.1;Parent=gene-O5C65_000359;Dbxref=NCBI_GP:HJH9170538.1;Name=HJH9170538.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460744.1;locus_tag=O5C65_000359;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=HJH9170538.1;transl_table=11 DALFDA020000002.1 tpg gene 145029 145625 . + . ID=gene-O5C65_000360;Name=hyaD;gbkey=Gene;gene=hyaD;gene_biotype=protein_coding;locus_tag=O5C65_000360 DALFDA020000002.1 Protein Homology CDS 145029 145625 . + 0 ID=cds-HJH9170539.1;Parent=gene-O5C65_000360;Dbxref=NCBI_GP:HJH9170539.1;Name=HJH9170539.1;gbkey=CDS;gene=hyaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460745.1;locus_tag=O5C65_000360;product=hydrogenase 1 maturation protease;protein_id=HJH9170539.1;transl_table=11 DALFDA020000002.1 tpg gene 145615 146019 . + . ID=gene-O5C65_000361;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=O5C65_000361 DALFDA020000002.1 Protein Homology CDS 145615 146019 . + 0 ID=cds-HJH9170540.1;Parent=gene-O5C65_000361;Dbxref=NCBI_GP:HJH9170540.1;Name=HJH9170540.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460746.1;locus_tag=O5C65_000361;product=hydrogenase-1 operon protein HyaE;protein_id=HJH9170540.1;transl_table=11 DALFDA020000002.1 tpg gene 146016 146864 . + . ID=gene-O5C65_000362;Name=O5C65_000362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000362 DALFDA020000002.1 Protein Homology CDS 146016 146864 . + 0 ID=cds-HJH9170541.1;Parent=gene-O5C65_000362;Dbxref=NCBI_GP:HJH9170541.1;Name=HJH9170541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460747.1;locus_tag=O5C65_000362;product=hydrogenase expression/formation protein;protein_id=HJH9170541.1;transl_table=11 DALFDA020000002.1 tpg gene 146939 148483 . + . ID=gene-O5C65_000363;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=O5C65_000363 DALFDA020000002.1 Protein Homology CDS 146939 148483 . + 0 ID=cds-HJH9170542.1;Parent=gene-O5C65_000363;Dbxref=NCBI_GP:HJH9170542.1;Name=HJH9170542.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460748.1;locus_tag=O5C65_000363;product=cytochrome bd-II oxidase subunit 1;protein_id=HJH9170542.1;transl_table=11 DALFDA020000002.1 tpg gene 148495 149631 . + . ID=gene-O5C65_000364;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=O5C65_000364 DALFDA020000002.1 Protein Homology CDS 148495 149631 . + 0 ID=cds-HJH9170543.1;Parent=gene-O5C65_000364;Dbxref=NCBI_GP:HJH9170543.1;Name=HJH9170543.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460749.1;locus_tag=O5C65_000364;product=cytochrome d ubiquinol oxidase subunit II;protein_id=HJH9170543.1;transl_table=11 DALFDA020000002.1 tpg gene 149644 149733 . + . ID=gene-O5C65_000365;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=O5C65_000365 DALFDA020000002.1 Protein Homology CDS 149644 149733 . + 0 ID=cds-HJH9170544.1;Parent=gene-O5C65_000365;Dbxref=NCBI_GP:HJH9170544.1;Name=HJH9170544.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460750.1;locus_tag=O5C65_000365;product=cytochrome bd-II oxidase subunit CbdX;protein_id=HJH9170544.1;transl_table=11 DALFDA020000002.1 tpg gene 150128 151402 . + . ID=gene-O5C65_000366;Name=O5C65_000366;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000366 DALFDA020000002.1 Protein Homology CDS 150128 151402 . + 0 ID=cds-HJH9170545.1;Parent=gene-O5C65_000366;Dbxref=NCBI_GP:HJH9170545.1;Name=HJH9170545.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=O5C65_000366;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=HJH9170545.1;transl_table=11 DALFDA020000002.1 tpg gene 151616 153328 . + . ID=gene-O5C65_000367;Name=O5C65_000367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000367 DALFDA020000002.1 Protein Homology CDS 151616 153328 . + 0 ID=cds-HJH9170546.1;Parent=gene-O5C65_000367;Dbxref=NCBI_GP:HJH9170546.1;Name=HJH9170546.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460752.1;locus_tag=O5C65_000367;product=alpha%2Calpha-trehalase;protein_id=HJH9170546.1;transl_table=11 DALFDA020000002.1 tpg gene 153391 153645 . - . ID=gene-O5C65_000368;Name=O5C65_000368;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000368 DALFDA020000002.1 Protein Homology CDS 153391 153645 . - 0 ID=cds-HJH9170547.1;Parent=gene-O5C65_000368;Dbxref=NCBI_GP:HJH9170547.1;Name=HJH9170547.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460753.1;locus_tag=O5C65_000368;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=HJH9170547.1;transl_table=11 DALFDA020000002.1 tpg gene 153814 154548 . + . ID=gene-O5C65_000369;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=O5C65_000369 DALFDA020000002.1 Protein Homology CDS 153814 154548 . + 0 ID=cds-HJH9170548.1;Parent=gene-O5C65_000369;Dbxref=NCBI_GP:HJH9170548.1;Name=HJH9170548.1;Ontology_term=GO:0071945,GO:0035438;gbkey=CDS;gene=ycgR;go_function=cyclic-di-GMP binding|0035438||IEA;go_process=regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed|0071945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460754.1;locus_tag=O5C65_000369;product=flagellar brake protein YcgR;protein_id=HJH9170548.1;transl_table=11 DALFDA020000002.1 tpg gene 154562 155173 . - . ID=gene-O5C65_000370;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=O5C65_000370 DALFDA020000002.1 Protein Homology CDS 154562 155173 . - 0 ID=cds-HJH9170549.1;Parent=gene-O5C65_000370;Dbxref=NCBI_GP:HJH9170549.1;Name=HJH9170549.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460755.1;locus_tag=O5C65_000370;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=HJH9170549.1;transl_table=11 DALFDA020000002.1 tpg gene 155344 156258 . + . ID=gene-O5C65_000371;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=O5C65_000371 DALFDA020000002.1 Protein Homology CDS 155344 156258 . + 0 ID=cds-HJH9170550.1;Parent=gene-O5C65_000371;Dbxref=NCBI_GP:HJH9170550.1;Name=HJH9170550.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460756.1;locus_tag=O5C65_000371;product=muramoyltetrapeptide carboxypeptidase;protein_id=HJH9170550.1;transl_table=11 DALFDA020000002.1 tpg gene 156355 158088 . + . ID=gene-O5C65_000372;Name=O5C65_000372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000372 DALFDA020000002.1 Protein Homology CDS 156355 158088 . + 0 ID=cds-HJH9170551.1;Parent=gene-O5C65_000372;Dbxref=NCBI_GP:HJH9170551.1;Name=HJH9170551.1;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460757.1;locus_tag=O5C65_000372;product=potassium/proton antiporter;protein_id=HJH9170551.1;transl_table=11 DALFDA020000002.1 tpg gene 158150 159220 . - . ID=gene-O5C65_000373;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=O5C65_000373 DALFDA020000002.1 Protein Homology CDS 158150 159220 . - 0 ID=cds-HJH9170552.1;Parent=gene-O5C65_000373;Dbxref=NCBI_GP:HJH9170552.1;Name=HJH9170552.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460758.1;locus_tag=O5C65_000373;product=catabolic alanine racemase DadX;protein_id=HJH9170552.1;transl_table=11 DALFDA020000002.1 tpg gene 159234 160532 . - . ID=gene-O5C65_000374;Name=O5C65_000374;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000374 DALFDA020000002.1 Protein Homology CDS 159234 160532 . - 0 ID=cds-HJH9170553.1;Parent=gene-O5C65_000374;Dbxref=NCBI_GP:HJH9170553.1;Name=HJH9170553.1;Ontology_term=GO:0055130,GO:0008718,GO:0016491,GO:0071949;gbkey=CDS;go_function=D-amino-acid dehydrogenase activity|0008718||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;go_process=D-alanine catabolic process|0055130||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460759.1;locus_tag=O5C65_000374;product=D-amino acid dehydrogenase;protein_id=HJH9170553.1;transl_table=11 DALFDA020000002.1 tpg gene 160855 162387 . + . ID=gene-O5C65_000375;Name=O5C65_000375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000375 DALFDA020000002.1 Protein Homology CDS 160855 162387 . + 0 ID=cds-HJH9170554.1;Parent=gene-O5C65_000375;Dbxref=NCBI_GP:HJH9170554.1;Name=HJH9170554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460760.3;locus_tag=O5C65_000375;product=SpoVR family protein;protein_id=HJH9170554.1;transl_table=11 DALFDA020000002.1 tpg gene 162434 163153 . - . ID=gene-O5C65_000376;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=O5C65_000376 DALFDA020000002.1 Protein Homology CDS 162434 163153 . - 0 ID=cds-HJH9170555.1;Parent=gene-O5C65_000376;Dbxref=NCBI_GP:HJH9170555.1;Name=HJH9170555.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460761.1;locus_tag=O5C65_000376;product=fatty acid metabolism transcriptional regulator FadR;protein_id=HJH9170555.1;transl_table=11 DALFDA020000002.1 tpg gene 163373 164917 . + . ID=gene-O5C65_000377;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=O5C65_000377 DALFDA020000002.1 Protein Homology CDS 163373 164917 . + 0 ID=cds-HJH9170556.1;Parent=gene-O5C65_000377;Dbxref=NCBI_GP:HJH9170556.1;Name=HJH9170556.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460762.1;locus_tag=O5C65_000377;product=Na(+)/H(+) antiporter NhaB;protein_id=HJH9170556.1;transl_table=11 DALFDA020000002.1 tpg gene 165059 165589 . + . ID=gene-O5C65_000378;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=O5C65_000378 DALFDA020000002.1 Protein Homology CDS 165059 165589 . + 0 ID=cds-HJH9170557.1;Parent=gene-O5C65_000378;Dbxref=NCBI_GP:HJH9170557.1;Name=HJH9170557.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460763.1;locus_tag=O5C65_000378;product=disulfide bond formation protein DsbB;protein_id=HJH9170557.1;transl_table=11 DALFDA020000002.1 tpg gene 165698 166039 . + . ID=gene-O5C65_000379;Name=O5C65_000379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000379 DALFDA020000002.1 Protein Homology CDS 165698 166039 . + 0 ID=cds-HJH9170558.1;Parent=gene-O5C65_000379;Dbxref=NCBI_GP:HJH9170558.1;Name=HJH9170558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460764.1;locus_tag=O5C65_000379;product=DUF1971 domain-containing protein;protein_id=HJH9170558.1;transl_table=11 DALFDA020000002.1 tpg gene 166111 166284 . - . ID=gene-O5C65_000380;Name=O5C65_000380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000380 DALFDA020000002.1 Protein Homology CDS 166111 166284 . - 0 ID=cds-HJH9170559.1;Parent=gene-O5C65_000380;Dbxref=NCBI_GP:HJH9170559.1;Name=HJH9170559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460765.1;locus_tag=O5C65_000380;product=GnsA/GnsB family addiction module toxin;protein_id=HJH9170559.1;transl_table=11 DALFDA020000002.1 tpg gene 166476 166613 . - . ID=gene-O5C65_000381;Name=O5C65_000381;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000381 DALFDA020000002.1 Protein Homology CDS 166476 166613 . - 0 ID=cds-HJH9170560.1;Parent=gene-O5C65_000381;Dbxref=NCBI_GP:HJH9170560.1;Name=HJH9170560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460766.1;locus_tag=O5C65_000381;product=hypothetical protein;protein_id=HJH9170560.1;transl_table=11 DALFDA020000002.1 tpg gene 166965 167411 . - . ID=gene-O5C65_000382;Name=O5C65_000382;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000382 DALFDA020000002.1 Protein Homology CDS 166965 167411 . - 0 ID=cds-HJH9170561.1;Parent=gene-O5C65_000382;Dbxref=NCBI_GP:HJH9170561.1;Name=HJH9170561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=O5C65_000382;product=YcgN family cysteine cluster protein;protein_id=HJH9170561.1;transl_table=11 DALFDA020000002.1 tpg gene 167504 168163 . - . ID=gene-O5C65_000383;Name=O5C65_000383;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000383 DALFDA020000002.1 Protein Homology CDS 167504 168163 . - 0 ID=cds-HJH9170562.1;Parent=gene-O5C65_000383;Dbxref=NCBI_GP:HJH9170562.1;Name=HJH9170562.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460768.1;locus_tag=O5C65_000383;product=fumarylacetoacetate hydrolase family protein;protein_id=HJH9170562.1;transl_table=11 DALFDA020000002.1 tpg gene 168213 168506 . - . ID=gene-O5C65_000384;Name=O5C65_000384;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000384 DALFDA020000002.1 Protein Homology CDS 168213 168506 . - 0 ID=cds-HJH9170563.1;Parent=gene-O5C65_000384;Dbxref=NCBI_GP:HJH9170563.1;Name=HJH9170563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309701.2;locus_tag=O5C65_000384;product=YcgL domain-containing protein;protein_id=HJH9170563.1;transl_table=11 DALFDA020000002.1 tpg gene 168632 169339 . + . ID=gene-O5C65_000385;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=O5C65_000385 DALFDA020000002.1 Protein Homology CDS 168632 169339 . + 0 ID=cds-HJH9170564.1;Parent=gene-O5C65_000385;Dbxref=NCBI_GP:HJH9170564.1;Name=HJH9170564.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460770.1;locus_tag=O5C65_000385;product=septum site-determining protein MinC;protein_id=HJH9170564.1;transl_table=11 DALFDA020000002.1 tpg gene 169363 170175 . + . ID=gene-O5C65_000386;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=O5C65_000386 DALFDA020000002.1 Protein Homology CDS 169363 170175 . + 0 ID=cds-HJH9170565.1;Parent=gene-O5C65_000386;Dbxref=NCBI_GP:HJH9170565.1;Name=HJH9170565.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=O5C65_000386;product=septum site-determining protein MinD;protein_id=HJH9170565.1;transl_table=11 DALFDA020000002.1 tpg gene 170179 170445 . + . ID=gene-O5C65_000387;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=O5C65_000387 DALFDA020000002.1 Protein Homology CDS 170179 170445 . + 0 ID=cds-HJH9170566.1;Parent=gene-O5C65_000387;Dbxref=NCBI_GP:HJH9170566.1;Name=HJH9170566.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460772.1;locus_tag=O5C65_000387;product=cell division topological specificity factor MinE;protein_id=HJH9170566.1;transl_table=11 DALFDA020000002.1 tpg gene 170567 171694 . - . ID=gene-O5C65_000388;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=O5C65_000388 DALFDA020000002.1 Protein Homology CDS 170567 171694 . - 0 ID=cds-HJH9170567.1;Parent=gene-O5C65_000388;Dbxref=NCBI_GP:HJH9170567.1;Name=HJH9170567.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416318.1;locus_tag=O5C65_000388;product=ribonuclease D;protein_id=HJH9170567.1;transl_table=11 DALFDA020000002.1 tpg gene 171767 173452 . - . ID=gene-O5C65_000389;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=O5C65_000389 DALFDA020000002.1 Protein Homology CDS 171767 173452 . - 0 ID=cds-HJH9170568.1;Parent=gene-O5C65_000389;Dbxref=NCBI_GP:HJH9170568.1;Name=HJH9170568.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460774.1;locus_tag=O5C65_000389;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=HJH9170568.1;transl_table=11 DALFDA020000002.1 tpg gene 173657 174238 . - . ID=gene-O5C65_000390;Name=O5C65_000390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000390 DALFDA020000002.1 Protein Homology CDS 173657 174238 . - 0 ID=cds-HJH9170569.1;Parent=gene-O5C65_000390;Dbxref=NCBI_GP:HJH9170569.1;Name=HJH9170569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460775.1;locus_tag=O5C65_000390;product=Slp family lipoprotein;protein_id=HJH9170569.1;transl_table=11 DALFDA020000002.1 tpg gene 174310 175005 . - . ID=gene-O5C65_000391;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=O5C65_000391 DALFDA020000002.1 Protein Homology CDS 174310 175005 . - 0 ID=cds-HJH9170570.1;Parent=gene-O5C65_000391;Dbxref=NCBI_GP:HJH9170570.1;Name=HJH9170570.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460776.1;locus_tag=O5C65_000391;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=HJH9170570.1;transl_table=11 DALFDA020000002.1 tpg gene 175063 176973 . - . ID=gene-O5C65_000392;Name=O5C65_000392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000392 DALFDA020000002.1 Protein Homology CDS 175063 176973 . - 0 ID=cds-HJH9170571.1;Parent=gene-O5C65_000392;Dbxref=NCBI_GP:HJH9170571.1;Name=HJH9170571.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460777.1;locus_tag=O5C65_000392;product=ATP-dependent DNA helicase;protein_id=HJH9170571.1;transl_table=11 DALFDA020000002.1 tpg gene 177104 177448 . + . ID=gene-O5C65_000393;Name=O5C65_000393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000393 DALFDA020000002.1 Protein Homology CDS 177104 177448 . + 0 ID=cds-HJH9170572.1;Parent=gene-O5C65_000393;Dbxref=NCBI_GP:HJH9170572.1;Name=HJH9170572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460778.1;locus_tag=O5C65_000393;product=RidA family protein;protein_id=HJH9170572.1;transl_table=11 DALFDA020000002.1 tpg gene 177454 177633 . - . ID=gene-O5C65_000394;Name=O5C65_000394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000394 DALFDA020000002.1 Protein Homology CDS 177454 177633 . - 0 ID=cds-HJH9170573.1;Parent=gene-O5C65_000394;Dbxref=NCBI_GP:HJH9170573.1;Name=HJH9170573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460779.1;locus_tag=O5C65_000394;product=YoaH family protein;protein_id=HJH9170573.1;transl_table=11 DALFDA020000002.1 tpg gene 177714 179078 . + . ID=gene-O5C65_000395;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=O5C65_000395 DALFDA020000002.1 Protein Homology CDS 177714 179078 . + 0 ID=cds-HJH9170574.1;Parent=gene-O5C65_000395;Dbxref=NCBI_GP:HJH9170574.1;Name=HJH9170574.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460780.1;locus_tag=O5C65_000395;product=aminodeoxychorismate synthase component 1;protein_id=HJH9170574.1;transl_table=11 DALFDA020000002.1 tpg gene 179082 179660 . + . ID=gene-O5C65_000396;Name=O5C65_000396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000396 DALFDA020000002.1 Protein Homology CDS 179082 179660 . + 0 ID=cds-HJH9170575.1;Parent=gene-O5C65_000396;Dbxref=NCBI_GP:HJH9170575.1;Name=HJH9170575.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460781.1;locus_tag=O5C65_000396;product=CoA pyrophosphatase;protein_id=HJH9170575.1;transl_table=11 DALFDA020000002.1 tpg gene 179924 181288 . + . ID=gene-O5C65_000397;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=O5C65_000397 DALFDA020000002.1 Protein Homology CDS 179924 181288 . + 0 ID=cds-HJH9170576.1;Parent=gene-O5C65_000397;Dbxref=NCBI_GP:HJH9170576.1;Name=HJH9170576.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460782.1;locus_tag=O5C65_000397;product=L-serine ammonia-lyase;protein_id=HJH9170576.1;transl_table=11 DALFDA020000002.1 tpg gene 181426 183027 . + . ID=gene-O5C65_000398;Name=O5C65_000398;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000398 DALFDA020000002.1 Protein Homology CDS 181426 183027 . + 0 ID=cds-HJH9170577.1;Parent=gene-O5C65_000398;Dbxref=NCBI_GP:HJH9170577.1;Name=HJH9170577.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192512.1;locus_tag=O5C65_000398;product=EAL domain-containing protein;protein_id=HJH9170577.1;transl_table=11 DALFDA020000002.1 tpg gene 183049 184608 . - . ID=gene-O5C65_000399;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=O5C65_000399 DALFDA020000002.1 Protein Homology CDS 183049 184608 . - 0 ID=cds-HJH9170578.1;Parent=gene-O5C65_000399;Dbxref=NCBI_GP:HJH9170578.1;Name=HJH9170578.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460784.2;locus_tag=O5C65_000399;product=CNNM family cation transport protein YoaE;protein_id=HJH9170578.1;transl_table=11 DALFDA020000002.1 tpg gene 184596 184928 . - . ID=gene-O5C65_000400;Name=O5C65_000400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000400 DALFDA020000002.1 Protein Homology CDS 184596 184928 . - 0 ID=cds-HJH9170579.1;Parent=gene-O5C65_000400;Dbxref=NCBI_GP:HJH9170579.1;Name=HJH9170579.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046943.2;locus_tag=O5C65_000400;product=protein YoaL;protein_id=HJH9170579.1;transl_table=11 DALFDA020000002.1 tpg gene 185081 186049 . + . ID=gene-O5C65_000401;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=O5C65_000401 DALFDA020000002.1 Protein Homology CDS 185081 186049 . + 0 ID=cds-HJH9170580.1;Parent=gene-O5C65_000401;Dbxref=NCBI_GP:HJH9170580.1;Name=HJH9170580.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460786.1;locus_tag=O5C65_000401;product=PTS mannose transporter subunit IIAB;protein_id=HJH9170580.1;transl_table=11 DALFDA020000002.1 tpg gene 186102 186902 . + . ID=gene-O5C65_000402;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=O5C65_000402 DALFDA020000002.1 Protein Homology CDS 186102 186902 . + 0 ID=cds-HJH9170581.1;Parent=gene-O5C65_000402;Dbxref=NCBI_GP:HJH9170581.1;Name=HJH9170581.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=O5C65_000402;product=PTS mannose transporter subunit IIC;protein_id=HJH9170581.1;transl_table=11 DALFDA020000002.1 tpg gene 186915 187766 . + . ID=gene-O5C65_000403;Name=O5C65_000403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000403 DALFDA020000002.1 Protein Homology CDS 186915 187766 . + 0 ID=cds-HJH9170582.1;Parent=gene-O5C65_000403;Dbxref=NCBI_GP:HJH9170582.1;Name=HJH9170582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228151.1;locus_tag=O5C65_000403;product=PTS mannose transporter subunit IID;protein_id=HJH9170582.1;transl_table=11 DALFDA020000002.1 tpg gene 187825 188283 . + . ID=gene-O5C65_000404;Name=O5C65_000404;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000404 DALFDA020000002.1 Protein Homology CDS 187825 188283 . + 0 ID=cds-HJH9170583.1;Parent=gene-O5C65_000404;Dbxref=NCBI_GP:HJH9170583.1;Name=HJH9170583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=O5C65_000404;product=DUF986 family protein;protein_id=HJH9170583.1;transl_table=11 DALFDA020000002.1 cmsearch riboswitch 188480 188581 . + . ID=id-DALFDA020000002.1:188480..188581;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch DALFDA020000002.1 tpg gene 188693 189259 . + . ID=gene-O5C65_000405;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=O5C65_000405 DALFDA020000002.1 Protein Homology CDS 188693 189259 . + 0 ID=cds-HJH9170584.1;Parent=gene-O5C65_000405;Dbxref=NCBI_GP:HJH9170584.1;Name=HJH9170584.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=O5C65_000405;product=manganese efflux pump MntP;protein_id=HJH9170584.1;transl_table=11 DALFDA020000002.1 tpg gene 189256 190065 . - . ID=gene-O5C65_000406;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=O5C65_000406 DALFDA020000002.1 Protein Homology CDS 189256 190065 . - 0 ID=cds-HJH9170585.1;Parent=gene-O5C65_000406;Dbxref=NCBI_GP:HJH9170585.1;Name=HJH9170585.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460791.1;locus_tag=O5C65_000406;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=HJH9170585.1;transl_table=11 DALFDA020000002.1 tpg gene 190131 191876 . - . ID=gene-O5C65_000407;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=O5C65_000407 DALFDA020000002.1 Protein Homology CDS 190131 191876 . - 0 ID=cds-HJH9170586.1;Parent=gene-O5C65_000407;Dbxref=NCBI_GP:HJH9170586.1;Name=HJH9170586.1;Ontology_term=GO:0009252,GO:0051301,GO:0008658,GO:0008955,GO:0005886;gbkey=CDS;gene=ftsI;go_component=plasma membrane|0005886||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460792.1;locus_tag=O5C65_000407;product=peptidoglycan glycosyltransferase FtsI;protein_id=HJH9170586.1;transl_table=11 DALFDA020000002.1 tpg gene 192096 192305 . - . ID=gene-O5C65_000408;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=O5C65_000408 DALFDA020000002.1 Protein Homology CDS 192096 192305 . - 0 ID=cds-HJH9170587.1;Parent=gene-O5C65_000408;Dbxref=NCBI_GP:HJH9170587.1;Name=HJH9170587.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=O5C65_000408;product=transcription antiterminator/RNA stability regulator CspE;protein_id=HJH9170587.1;transl_table=11 DALFDA020000002.1 tpg gene 192318 192461 . - . ID=gene-O5C65_000409;Name=O5C65_000409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000409 DALFDA020000002.1 Protein Homology CDS 192318 192461 . - 0 ID=cds-HJH9170588.1;Parent=gene-O5C65_000409;Dbxref=NCBI_GP:HJH9170588.1;Name=HJH9170588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460794.1;locus_tag=O5C65_000409;product=DUF2627 domain-containing protein;protein_id=HJH9170588.1;transl_table=11 DALFDA020000002.1 tpg gene 193110 193397 . - . ID=gene-O5C65_000410;Name=O5C65_000410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000410 DALFDA020000002.1 Protein Homology CDS 193110 193397 . - 0 ID=cds-HJH9170589.1;Parent=gene-O5C65_000410;Dbxref=NCBI_GP:HJH9170589.1;Name=HJH9170589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460795.1;locus_tag=O5C65_000410;product=YebO family protein;protein_id=HJH9170589.1;transl_table=11 DALFDA020000002.1 tpg gene 193468 193611 . - . ID=gene-O5C65_000411;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=O5C65_000411 DALFDA020000002.1 Protein Homology CDS 193468 193611 . - 0 ID=cds-HJH9170590.1;Parent=gene-O5C65_000411;Dbxref=NCBI_GP:HJH9170590.1;Name=HJH9170590.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460796.1;locus_tag=O5C65_000411;product=PhoP/PhoQ regulator MgrB;protein_id=HJH9170590.1;transl_table=11 DALFDA020000002.1 tpg gene 193769 194008 . + . ID=gene-O5C65_000412;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=O5C65_000412 DALFDA020000002.1 Protein Homology CDS 193769 194008 . + 0 ID=cds-HJH9170591.1;Parent=gene-O5C65_000412;Dbxref=NCBI_GP:HJH9170591.1;Name=HJH9170591.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460797.1;locus_tag=O5C65_000412;product=invasion protein YobH;protein_id=HJH9170591.1;transl_table=11 DALFDA020000002.1 tpg gene 194221 195012 . - . ID=gene-O5C65_000413;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=O5C65_000413 DALFDA020000002.1 Protein Homology CDS 194221 195012 . - 0 ID=cds-HJH9170592.1;Parent=gene-O5C65_000413;Dbxref=NCBI_GP:HJH9170592.1;Name=HJH9170592.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460798.1;locus_tag=O5C65_000413;product=DNA-binding transcriptional regulator KdgR;protein_id=HJH9170592.1;transl_table=11 DALFDA020000002.1 tpg gene 195188 196561 . + . ID=gene-O5C65_000414;Name=O5C65_000414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000414 DALFDA020000002.1 Protein Homology CDS 195188 196561 . + 0 ID=cds-HJH9170593.1;Parent=gene-O5C65_000414;Dbxref=NCBI_GP:HJH9170593.1;Name=HJH9170593.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460799.1;locus_tag=O5C65_000414;product=MFS transporter;protein_id=HJH9170593.1;transl_table=11 DALFDA020000002.1 tpg gene 196609 197490 . - . ID=gene-O5C65_000415;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=O5C65_000415 DALFDA020000002.1 Protein Homology CDS 196609 197490 . - 0 ID=cds-HJH9170594.1;Parent=gene-O5C65_000415;Dbxref=NCBI_GP:HJH9170594.1;Name=HJH9170594.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=O5C65_000415;product=protease HtpX;protein_id=HJH9170594.1;transl_table=11 DALFDA020000002.1 tpg gene 197684 199732 . - . ID=gene-O5C65_000416;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=O5C65_000416 DALFDA020000002.1 Protein Homology CDS 197684 199732 . - 0 ID=cds-HJH9170595.1;Parent=gene-O5C65_000416;Dbxref=NCBI_GP:HJH9170595.1;Name=HJH9170595.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460801.1;locus_tag=O5C65_000416;product=carboxy terminal-processing peptidase;protein_id=HJH9170595.1;transl_table=11 DALFDA020000002.1 tpg gene 199752 200438 . - . ID=gene-O5C65_000417;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=O5C65_000417 DALFDA020000002.1 Protein Homology CDS 199752 200438 . - 0 ID=cds-HJH9170596.1;Parent=gene-O5C65_000417;Dbxref=NCBI_GP:HJH9170596.1;Name=HJH9170596.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460802.1;locus_tag=O5C65_000417;product=RNA chaperone ProQ;protein_id=HJH9170596.1;transl_table=11 DALFDA020000002.1 tpg gene 200536 201033 . - . ID=gene-O5C65_000418;Name=O5C65_000418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000418 DALFDA020000002.1 Protein Homology CDS 200536 201033 . - 0 ID=cds-HJH9170597.1;Parent=gene-O5C65_000418;Dbxref=NCBI_GP:HJH9170597.1;Name=HJH9170597.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416346.4;locus_tag=O5C65_000418;product=GAF domain-containing protein;protein_id=HJH9170597.1;transl_table=11 DALFDA020000002.1 tpg gene 201162 202445 . + . ID=gene-O5C65_000419;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=O5C65_000419 DALFDA020000002.1 Protein Homology CDS 201162 202445 . + 0 ID=cds-HJH9170598.1;Parent=gene-O5C65_000419;Dbxref=NCBI_GP:HJH9170598.1;Name=HJH9170598.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460804.1;locus_tag=O5C65_000419;product=membrane integrity lipid transport subunit YebS;protein_id=HJH9170598.1;transl_table=11 DALFDA020000002.1 tpg gene 202414 205047 . + . ID=gene-O5C65_000420;Name=O5C65_000420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000420 DALFDA020000002.1 Protein Homology CDS 202414 205047 . + 0 ID=cds-HJH9170599.1;Parent=gene-O5C65_000420;Dbxref=NCBI_GP:HJH9170599.1;Name=HJH9170599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=O5C65_000420;product=MlaD family protein;protein_id=HJH9170599.1;transl_table=11 DALFDA020000002.1 tpg gene 205125 206564 . + . ID=gene-O5C65_000421;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=O5C65_000421 DALFDA020000002.1 Protein Homology CDS 205125 206564 . + 0 ID=cds-HJH9170600.1;Parent=gene-O5C65_000421;Dbxref=NCBI_GP:HJH9170600.1;Name=HJH9170600.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460806.1;locus_tag=O5C65_000421;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=HJH9170600.1;transl_table=11 DALFDA020000002.1 tpg gene 206682 206918 . + . ID=gene-O5C65_000422;Name=O5C65_000422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000422 DALFDA020000002.1 Protein Homology CDS 206682 206918 . + 0 ID=cds-HJH9170601.1;Parent=gene-O5C65_000422;Dbxref=NCBI_GP:HJH9170601.1;Name=HJH9170601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=O5C65_000422;product=YebV family protein;protein_id=HJH9170601.1;transl_table=11 DALFDA020000002.1 tpg gene 207029 207220 . + . ID=gene-O5C65_000423;Name=O5C65_000423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000423 DALFDA020000002.1 Protein Homology CDS 207029 207220 . + 0 ID=cds-HJH9170602.1;Parent=gene-O5C65_000423;Dbxref=NCBI_GP:HJH9170602.1;Name=HJH9170602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460808.1;locus_tag=O5C65_000423;product=YebW family protein;protein_id=HJH9170602.1;transl_table=11 DALFDA020000002.1 tpg gene 207239 207889 . - . ID=gene-O5C65_000424;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=O5C65_000424 DALFDA020000002.1 Protein Homology CDS 207239 207889 . - 0 ID=cds-HJH9170603.1;Parent=gene-O5C65_000424;Dbxref=NCBI_GP:HJH9170603.1;Name=HJH9170603.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460809.1;locus_tag=O5C65_000424;product=protein-serine/threonine phosphatase;protein_id=HJH9170603.1;transl_table=11 DALFDA020000002.1 tpg gene 208112 208276 . - . ID=gene-O5C65_000425;Name=O5C65_000425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000425 DALFDA020000002.1 Protein Homology CDS 208112 208276 . - 0 ID=cds-HJH9170604.1;Parent=gene-O5C65_000425;Dbxref=NCBI_GP:HJH9170604.1;Name=HJH9170604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460810.1;locus_tag=O5C65_000425;product=hypothetical protein;protein_id=HJH9170604.1;transl_table=11 DALFDA020000002.1 tpg gene 208561 209283 . - . ID=gene-O5C65_000426;Name=sopE2;gbkey=Gene;gene=sopE2;gene_biotype=protein_coding;locus_tag=O5C65_000426 DALFDA020000002.1 Protein Homology CDS 208561 209283 . - 0 ID=cds-HJH9170605.1;Parent=gene-O5C65_000426;Dbxref=NCBI_GP:HJH9170605.1;Name=HJH9170605.1;gbkey=CDS;gene=sopE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460811.1;locus_tag=O5C65_000426;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE2;protein_id=HJH9170605.1;transl_table=11 DALFDA020000002.1 tpg gene 209968 210363 . + . ID=gene-O5C65_000427;Name=O5C65_000427;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000427 DALFDA020000002.1 Protein Homology CDS 209968 210363 . + 0 ID=cds-HJH9170606.1;Parent=gene-O5C65_000427;Dbxref=NCBI_GP:HJH9170606.1;Name=HJH9170606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460812.1;locus_tag=O5C65_000427;product=DUF1398 domain-containing protein;protein_id=HJH9170606.1;transl_table=11 DALFDA020000002.1 tpg gene 210692 211168 . + . ID=gene-O5C65_000428;Name=O5C65_000428;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000428 DALFDA020000002.1 Protein Homology CDS 210692 211168 . + 0 ID=cds-HJH9170607.1;Parent=gene-O5C65_000428;Dbxref=NCBI_GP:HJH9170607.1;Name=HJH9170607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000030934.1;locus_tag=O5C65_000428;product=hypothetical protein;protein_id=HJH9170607.1;transl_table=11 DALFDA020000002.1 tpg gene 211556 211975 . - . ID=gene-O5C65_000429;Name=O5C65_000429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000429 DALFDA020000002.1 Protein Homology CDS 211556 211975 . - 0 ID=cds-HJH9170608.1;Parent=gene-O5C65_000429;Dbxref=NCBI_GP:HJH9170608.1;Name=HJH9170608.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460813.1;locus_tag=O5C65_000429;product=GNAT family N-acetyltransferase;protein_id=HJH9170608.1;transl_table=11 DALFDA020000002.1 tpg gene 212345 212614 . + . ID=gene-O5C65_000430;Name=O5C65_000430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000430 DALFDA020000002.1 Protein Homology CDS 212345 212614 . + 0 ID=cds-HJH9170609.1;Parent=gene-O5C65_000430;Dbxref=NCBI_GP:HJH9170609.1;Name=HJH9170609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460814.1;locus_tag=O5C65_000430;product=hypothetical protein;protein_id=HJH9170609.1;transl_table=11 DALFDA020000002.1 tpg gene 212780 212920 . + . ID=gene-O5C65_000431;Name=O5C65_000431;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000431 DALFDA020000002.1 Protein Homology CDS 212780 212920 . + 0 ID=cds-HJH9170610.1;Parent=gene-O5C65_000431;Dbxref=NCBI_GP:HJH9170610.1;Name=HJH9170610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576018.1;locus_tag=O5C65_000431;product=hypothetical protein;protein_id=HJH9170610.1;transl_table=11 DALFDA020000002.1 tpg pseudogene 213066 214274 . - . ID=gene-O5C65_000432;Name=O5C65_000432;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_000432;pseudo=true DALFDA020000002.1 Protein Homology CDS 213066 214274 . - 0 ID=cds-O5C65_000432;Parent=gene-O5C65_000432;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=O5C65_000432;product=IS256 family transposase;pseudo=true;transl_table=11 DALFDA020000002.1 tpg pseudogene 214344 214765 . + . ID=gene-O5C65_000433;Name=O5C65_000433;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_000433;pseudo=true DALFDA020000002.1 Protein Homology CDS 214344 214765 . + 0 ID=cds-O5C65_000433;Parent=gene-O5C65_000433;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001189081.1;locus_tag=O5C65_000433;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 DALFDA020000002.1 tpg gene 216062 216976 . + . ID=gene-O5C65_000434;Name=O5C65_000434;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000434 DALFDA020000002.1 Protein Homology CDS 216062 216976 . + 0 ID=cds-HJH9170611.1;Parent=gene-O5C65_000434;Dbxref=NCBI_GP:HJH9170611.1;Name=HJH9170611.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460818.1;locus_tag=O5C65_000434;product=DMT family transporter;protein_id=HJH9170611.1;transl_table=11 DALFDA020000002.1 tpg gene 217109 217267 . + . ID=gene-O5C65_000435;Name=O5C65_000435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000435 DALFDA020000002.1 Protein Homology CDS 217109 217267 . + 0 ID=cds-HJH9170612.1;Parent=gene-O5C65_000435;Dbxref=NCBI_GP:HJH9170612.1;Name=HJH9170612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460819.1;locus_tag=O5C65_000435;product=DUF5993 family protein;protein_id=HJH9170612.1;transl_table=11 DALFDA020000002.1 tpg gene 217277 217891 . + . ID=gene-O5C65_000436;Name=O5C65_000436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000436 DALFDA020000002.1 Protein Homology CDS 217277 217891 . + 0 ID=cds-HJH9170613.1;Parent=gene-O5C65_000436;Dbxref=NCBI_GP:HJH9170613.1;Name=HJH9170613.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460820.1;locus_tag=O5C65_000436;product=disulfide bond formation protein B;protein_id=HJH9170613.1;transl_table=11 DALFDA020000002.1 tpg gene 218300 220279 . - . ID=gene-O5C65_000437;Name=O5C65_000437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000437 DALFDA020000002.1 Protein Homology CDS 218300 220279 . - 0 ID=cds-HJH9170614.1;Parent=gene-O5C65_000437;Dbxref=NCBI_GP:HJH9170614.1;Name=HJH9170614.1;Ontology_term=GO:0008484,GO:0046872,GO:0046983;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237394.1;locus_tag=O5C65_000437;product=alkyl/aryl-sulfatase;protein_id=HJH9170614.1;transl_table=11 DALFDA020000002.1 tpg gene 220675 221805 . + . ID=gene-O5C65_000438;Name=O5C65_000438;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000438 DALFDA020000002.1 Protein Homology CDS 220675 221805 . + 0 ID=cds-HJH9170615.1;Parent=gene-O5C65_000438;Dbxref=NCBI_GP:HJH9170615.1;Name=HJH9170615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000529511.1;locus_tag=O5C65_000438;product=membrane-associated sensor domain-containing protein;protein_id=HJH9170615.1;transl_table=11 DALFDA020000002.1 tpg gene 222092 222487 . - . ID=gene-O5C65_000439;Name=O5C65_000439;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000439 DALFDA020000002.1 Protein Homology CDS 222092 222487 . - 0 ID=cds-HJH9170616.1;Parent=gene-O5C65_000439;Dbxref=NCBI_GP:HJH9170616.1;Name=HJH9170616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089414.1;locus_tag=O5C65_000439;product=DUF977 family protein;protein_id=HJH9170616.1;transl_table=11 DALFDA020000002.1 tpg pseudogene 222501 222611 . - . ID=gene-O5C65_000440;Name=O5C65_000440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_000440;pseudo=true DALFDA020000002.1 Protein Homology CDS 222501 222611 . - 0 ID=cds-O5C65_000440;Parent=gene-O5C65_000440;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000140163.1;locus_tag=O5C65_000440;product=replication protein P;pseudo=true;transl_table=11 DALFDA020000002.1 tpg pseudogene 222608 222972 . + . ID=gene-O5C65_000441;Name=O5C65_000441;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_000441;pseudo=true DALFDA020000002.1 Protein Homology CDS 222608 222972 . + 0 ID=cds-O5C65_000441;Parent=gene-O5C65_000441;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006259,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415865.1;locus_tag=O5C65_000441;product=recombinase RecT;pseudo=true;transl_table=11 DALFDA020000002.1 tpg pseudogene 222971 223279 . + . ID=gene-O5C65_000442;Name=O5C65_000442;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_000442;pseudo=true DALFDA020000002.1 Protein Homology CDS 222971 223279 . + 0 ID=cds-O5C65_000442;Parent=gene-O5C65_000442;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000087641.1;locus_tag=O5C65_000442;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 ##sequence-region DALFDA020000003.1 1 215818 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000003.1 tpg region 1 215818 . + . ID=DALFDA020000003.1:1..215818;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000003.1 tpg gene 65 631 . - . ID=gene-O5C65_000443;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=O5C65_000443 DALFDA020000003.1 Protein Homology CDS 65 631 . - 0 ID=cds-HJH9170617.1;Parent=gene-O5C65_000443;Dbxref=NCBI_GP:HJH9170617.1;Name=HJH9170617.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459252.1;locus_tag=O5C65_000443;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=HJH9170617.1;transl_table=11 DALFDA020000003.1 tpg gene 821 1852 . + . ID=gene-O5C65_000444;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=O5C65_000444 DALFDA020000003.1 Protein Homology CDS 821 1852 . + 0 ID=cds-HJH9170618.1;Parent=gene-O5C65_000444;Dbxref=NCBI_GP:HJH9170618.1;Name=HJH9170618.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=O5C65_000444;product=methionine ABC transporter ATP-binding protein MetN;protein_id=HJH9170618.1;transl_table=11 DALFDA020000003.1 tpg gene 1845 2498 . + . ID=gene-O5C65_000445;Name=O5C65_000445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000445 DALFDA020000003.1 Protein Homology CDS 1845 2498 . + 0 ID=cds-HJH9170619.1;Parent=gene-O5C65_000445;Dbxref=NCBI_GP:HJH9170619.1;Name=HJH9170619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=O5C65_000445;product=methionine ABC transporter permease MetI;protein_id=HJH9170619.1;transl_table=11 DALFDA020000003.1 tpg gene 2537 3352 . + . ID=gene-O5C65_000446;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=O5C65_000446 DALFDA020000003.1 Protein Homology CDS 2537 3352 . + 0 ID=cds-HJH9170620.1;Parent=gene-O5C65_000446;Dbxref=NCBI_GP:HJH9170620.1;Name=HJH9170620.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459249.1;locus_tag=O5C65_000446;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=HJH9170620.1;transl_table=11 DALFDA020000003.1 tpg gene 3471 3875 . + . ID=gene-O5C65_000447;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=O5C65_000447 DALFDA020000003.1 Protein Homology CDS 3471 3875 . + 0 ID=cds-HJH9170621.1;Parent=gene-O5C65_000447;Dbxref=NCBI_GP:HJH9170621.1;Name=HJH9170621.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459248.1;locus_tag=O5C65_000447;product=Rcs stress response system protein RcsF;protein_id=HJH9170621.1;transl_table=11 DALFDA020000003.1 tpg gene 3872 4579 . + . ID=gene-O5C65_000448;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=O5C65_000448 DALFDA020000003.1 Protein Homology CDS 3872 4579 . + 0 ID=cds-HJH9170622.1;Parent=gene-O5C65_000448;Dbxref=NCBI_GP:HJH9170622.1;Name=HJH9170622.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459247.1;locus_tag=O5C65_000448;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=HJH9170622.1;transl_table=11 DALFDA020000003.1 tpg gene 4690 6408 . + . ID=gene-O5C65_000449;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=O5C65_000449 DALFDA020000003.1 Protein Homology CDS 4690 6408 . + 0 ID=cds-HJH9170623.1;Parent=gene-O5C65_000449;Dbxref=NCBI_GP:HJH9170623.1;Name=HJH9170623.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=O5C65_000449;product=proline--tRNA ligase;protein_id=HJH9170623.1;transl_table=11 DALFDA020000003.1 tpg gene 6482 7183 . - . ID=gene-O5C65_000450;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=O5C65_000450 DALFDA020000003.1 Protein Homology CDS 6482 7183 . - 0 ID=cds-HJH9170624.1;Parent=gene-O5C65_000450;Dbxref=NCBI_GP:HJH9170624.1;Name=HJH9170624.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006899150.1;locus_tag=O5C65_000450;product=envelope stress response activation lipoprotein NlpE;protein_id=HJH9170624.1;transl_table=11 DALFDA020000003.1 tpg gene 7215 7637 . - . ID=gene-O5C65_000451;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=O5C65_000451 DALFDA020000003.1 Protein Homology CDS 7215 7637 . - 0 ID=cds-HJH9170625.1;Parent=gene-O5C65_000451;Dbxref=NCBI_GP:HJH9170625.1;Name=HJH9170625.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459245.1;locus_tag=O5C65_000451;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=HJH9170625.1;transl_table=11 DALFDA020000003.1 tpg gene 7634 8179 . - . ID=gene-O5C65_000452;Name=O5C65_000452;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000452 DALFDA020000003.1 Protein Homology CDS 7634 8179 . - 0 ID=cds-HJH9170626.1;Parent=gene-O5C65_000452;Dbxref=NCBI_GP:HJH9170626.1;Name=HJH9170626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459244.1;locus_tag=O5C65_000452;product=YaeQ family protein;protein_id=HJH9170626.1;transl_table=11 DALFDA020000003.1 tpg gene 8377 8577 . + . ID=gene-O5C65_000453;Name=O5C65_000453;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000453 DALFDA020000003.1 Protein Homology CDS 8377 8577 . + 0 ID=cds-HJH9170627.1;Parent=gene-O5C65_000453;Dbxref=NCBI_GP:HJH9170627.1;Name=HJH9170627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=O5C65_000453;product=YaeP family protein;protein_id=HJH9170627.1;transl_table=11 DALFDA020000003.1 tpg gene 8564 8824 . + . ID=gene-O5C65_000454;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=O5C65_000454 DALFDA020000003.1 Protein Homology CDS 8564 8824 . + 0 ID=cds-HJH9170628.1;Parent=gene-O5C65_000454;Dbxref=NCBI_GP:HJH9170628.1;Name=HJH9170628.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459242.1;locus_tag=O5C65_000454;product=Rho-binding antiterminator;protein_id=HJH9170628.1;transl_table=11 DALFDA020000003.1 tpg gene 8908 10200 . - . ID=gene-O5C65_000455;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=O5C65_000455 DALFDA020000003.1 Protein Homology CDS 8908 10200 . - 0 ID=cds-HJH9170629.1;Parent=gene-O5C65_000455;Dbxref=NCBI_GP:HJH9170629.1;Name=HJH9170629.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459241.1;locus_tag=O5C65_000455;product=tRNA lysidine(34) synthetase TilS;protein_id=HJH9170629.1;transl_table=11 DALFDA020000003.1 tpg gene 10263 10652 . - . ID=gene-O5C65_000456;Name=O5C65_000456;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000456 DALFDA020000003.1 Protein Homology CDS 10263 10652 . - 0 ID=cds-HJH9170630.1;Parent=gene-O5C65_000456;Dbxref=NCBI_GP:HJH9170630.1;Name=HJH9170630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459240.1;locus_tag=O5C65_000456;product=VOC family protein;protein_id=HJH9170630.1;transl_table=11 DALFDA020000003.1 tpg gene 10708 12849 . - . ID=gene-O5C65_000457;Name=O5C65_000457;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000457 DALFDA020000003.1 Protein Homology CDS 10708 12849 . - 0 ID=cds-HJH9170631.1;Parent=gene-O5C65_000457;Dbxref=NCBI_GP:HJH9170631.1;Name=HJH9170631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459239.1;locus_tag=O5C65_000457;product=lysine decarboxylase LdcC;protein_id=HJH9170631.1;transl_table=11 DALFDA020000003.1 tpg gene 12925 14688 . - . ID=gene-O5C65_000458;Name=O5C65_000458;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000458 DALFDA020000003.1 Protein Homology CDS 12925 14688 . - 0 ID=cds-HJH9170632.1;Parent=gene-O5C65_000458;Dbxref=NCBI_GP:HJH9170632.1;Name=HJH9170632.1;Ontology_term=GO:0006032,GO:0016998,GO:0004568;gbkey=CDS;go_function=chitinase activity|0004568||IEA;go_process=chitin catabolic process|0006032||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459238.1;locus_tag=O5C65_000458;product=glycoside hydrolase family 19 protein;protein_id=HJH9170632.1;transl_table=11 DALFDA020000003.1 tpg gene 14868 15827 . - . ID=gene-O5C65_000459;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=O5C65_000459 DALFDA020000003.1 Protein Homology CDS 14868 15827 . - 0 ID=cds-HJH9170633.1;Parent=gene-O5C65_000459;Dbxref=NCBI_GP:HJH9170633.1;Name=HJH9170633.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=O5C65_000459;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=HJH9170633.1;transl_table=11 DALFDA020000003.1 tpg gene 15840 19322 . - . ID=gene-O5C65_000460;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=O5C65_000460 DALFDA020000003.1 Protein Homology CDS 15840 19322 . - 0 ID=cds-HJH9170634.1;Parent=gene-O5C65_000460;Dbxref=NCBI_GP:HJH9170634.1;Name=HJH9170634.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459236.1;locus_tag=O5C65_000460;product=DNA polymerase III subunit alpha;protein_id=HJH9170634.1;transl_table=11 DALFDA020000003.1 tpg gene 19346 19942 . - . ID=gene-O5C65_000461;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=O5C65_000461 DALFDA020000003.1 Protein Homology CDS 19346 19942 . - 0 ID=cds-HJH9170635.1;Parent=gene-O5C65_000461;Dbxref=NCBI_GP:HJH9170635.1;Name=HJH9170635.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459235.1;locus_tag=O5C65_000461;product=ribonuclease HII;protein_id=HJH9170635.1;transl_table=11 DALFDA020000003.1 tpg gene 19939 21087 . - . ID=gene-O5C65_000462;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=O5C65_000462 DALFDA020000003.1 Protein Homology CDS 19939 21087 . - 0 ID=cds-HJH9170636.1;Parent=gene-O5C65_000462;Dbxref=NCBI_GP:HJH9170636.1;Name=HJH9170636.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459234.1;locus_tag=O5C65_000462;product=lipid-A-disaccharide synthase;protein_id=HJH9170636.1;transl_table=11 DALFDA020000003.1 tpg gene 21087 21875 . - . ID=gene-O5C65_000463;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=O5C65_000463 DALFDA020000003.1 Protein Homology CDS 21087 21875 . - 0 ID=cds-HJH9170637.1;Parent=gene-O5C65_000463;Dbxref=NCBI_GP:HJH9170637.1;Name=HJH9170637.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=O5C65_000463;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=HJH9170637.1;transl_table=11 DALFDA020000003.1 tpg gene 21879 22334 . - . ID=gene-O5C65_000464;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=O5C65_000464 DALFDA020000003.1 Protein Homology CDS 21879 22334 . - 0 ID=cds-HJH9170638.1;Parent=gene-O5C65_000464;Dbxref=NCBI_GP:HJH9170638.1;Name=HJH9170638.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=O5C65_000464;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=HJH9170638.1;transl_table=11 DALFDA020000003.1 tpg gene 22440 23465 . - . ID=gene-O5C65_000465;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=O5C65_000465 DALFDA020000003.1 Protein Homology CDS 22440 23465 . - 0 ID=cds-HJH9170639.1;Parent=gene-O5C65_000465;Dbxref=NCBI_GP:HJH9170639.1;Name=HJH9170639.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=O5C65_000465;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=HJH9170639.1;transl_table=11 DALFDA020000003.1 tpg gene 23469 23954 . - . ID=gene-O5C65_000466;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=O5C65_000466 DALFDA020000003.1 Protein Homology CDS 23469 23954 . - 0 ID=cds-HJH9170640.1;Parent=gene-O5C65_000466;Dbxref=NCBI_GP:HJH9170640.1;Name=HJH9170640.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459230.1;locus_tag=O5C65_000466;product=molecular chaperone Skp;protein_id=HJH9170640.1;transl_table=11 DALFDA020000003.1 tpg gene 24077 26488 . - . ID=gene-O5C65_000467;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=O5C65_000467 DALFDA020000003.1 Protein Homology CDS 24077 26488 . - 0 ID=cds-HJH9170641.1;Parent=gene-O5C65_000467;Dbxref=NCBI_GP:HJH9170641.1;Name=HJH9170641.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459229.1;locus_tag=O5C65_000467;product=outer membrane protein assembly factor BamA;protein_id=HJH9170641.1;transl_table=11 DALFDA020000003.1 tpg gene 26520 27872 . - . ID=gene-O5C65_000468;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=O5C65_000468 DALFDA020000003.1 Protein Homology CDS 26520 27872 . - 0 ID=cds-HJH9170642.1;Parent=gene-O5C65_000468;Dbxref=NCBI_GP:HJH9170642.1;Name=HJH9170642.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=O5C65_000468;product=sigma E protease regulator RseP;protein_id=HJH9170642.1;transl_table=11 DALFDA020000003.1 tpg gene 27884 28741 . - . ID=gene-O5C65_000469;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=O5C65_000469 DALFDA020000003.1 Protein Homology CDS 27884 28741 . - 0 ID=cds-HJH9170643.1;Parent=gene-O5C65_000469;Dbxref=NCBI_GP:HJH9170643.1;Name=HJH9170643.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459227.1;locus_tag=O5C65_000469;product=phosphatidate cytidylyltransferase;protein_id=HJH9170643.1;transl_table=11 DALFDA020000003.1 tpg gene 28754 29512 . - . ID=gene-O5C65_000470;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=O5C65_000470 DALFDA020000003.1 Protein Homology CDS 28754 29512 . - 0 ID=cds-HJH9170644.1;Parent=gene-O5C65_000470;Dbxref=NCBI_GP:HJH9170644.1;Name=HJH9170644.1;Ontology_term=GO:0043164,GO:0004659,GO:0008834;gbkey=CDS;gene=ispU;go_function=prenyltransferase activity|0004659||IEA,ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459226.1;locus_tag=O5C65_000470;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=HJH9170644.1;transl_table=11 DALFDA020000003.1 tpg gene 29825 31021 . - . ID=gene-O5C65_000471;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=O5C65_000471 DALFDA020000003.1 Protein Homology CDS 29825 31021 . - 0 ID=cds-HJH9170645.1;Parent=gene-O5C65_000471;Dbxref=NCBI_GP:HJH9170645.1;Name=HJH9170645.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459225.1;locus_tag=O5C65_000471;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=HJH9170645.1;transl_table=11 DALFDA020000003.1 tpg gene 31163 31720 . - . ID=gene-O5C65_000472;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=O5C65_000472 DALFDA020000003.1 Protein Homology CDS 31163 31720 . - 0 ID=cds-HJH9170646.1;Parent=gene-O5C65_000472;Dbxref=NCBI_GP:HJH9170646.1;Name=HJH9170646.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=O5C65_000472;product=ribosome recycling factor;protein_id=HJH9170646.1;transl_table=11 DALFDA020000003.1 tpg gene 31867 32592 . - . ID=gene-O5C65_000473;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=O5C65_000473 DALFDA020000003.1 Protein Homology CDS 31867 32592 . - 0 ID=cds-HJH9170647.1;Parent=gene-O5C65_000473;Dbxref=NCBI_GP:HJH9170647.1;Name=HJH9170647.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=O5C65_000473;product=UMP kinase;protein_id=HJH9170647.1;transl_table=11 DALFDA020000003.1 tpg gene 32737 33588 . - . ID=gene-O5C65_000474;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=O5C65_000474 DALFDA020000003.1 Protein Homology CDS 32737 33588 . - 0 ID=cds-HJH9170648.1;Parent=gene-O5C65_000474;Dbxref=NCBI_GP:HJH9170648.1;Name=HJH9170648.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=O5C65_000474;product=translation elongation factor Ts;protein_id=HJH9170648.1;transl_table=11 DALFDA020000003.1 tpg gene 33846 34571 . - . ID=gene-O5C65_000475;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=O5C65_000475 DALFDA020000003.1 Protein Homology CDS 33846 34571 . - 0 ID=cds-HJH9170649.1;Parent=gene-O5C65_000475;Dbxref=NCBI_GP:HJH9170649.1;Name=HJH9170649.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=O5C65_000475;product=30S ribosomal protein S2;protein_id=HJH9170649.1;transl_table=11 DALFDA020000003.1 tpg gene 35022 35816 . + . ID=gene-O5C65_000476;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=O5C65_000476 DALFDA020000003.1 Protein Homology CDS 35022 35816 . + 0 ID=cds-HJH9170650.1;Parent=gene-O5C65_000476;Dbxref=NCBI_GP:HJH9170650.1;Name=HJH9170650.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459220.1;locus_tag=O5C65_000476;product=type I methionyl aminopeptidase;protein_id=HJH9170650.1;transl_table=11 DALFDA020000003.1 tpg gene 36054 38726 . + . ID=gene-O5C65_000477;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=O5C65_000477 DALFDA020000003.1 Protein Homology CDS 36054 38726 . + 0 ID=cds-HJH9170651.1;Parent=gene-O5C65_000477;Dbxref=NCBI_GP:HJH9170651.1;Name=HJH9170651.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459219.1;locus_tag=O5C65_000477;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=HJH9170651.1;transl_table=11 DALFDA020000003.1 tpg gene 38756 39580 . + . ID=gene-O5C65_000478;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=O5C65_000478 DALFDA020000003.1 Protein Homology CDS 38756 39580 . + 0 ID=cds-HJH9170652.1;Parent=gene-O5C65_000478;Dbxref=NCBI_GP:HJH9170652.1;Name=HJH9170652.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=O5C65_000478;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=HJH9170652.1;transl_table=11 DALFDA020000003.1 tpg gene 39616 40917 . - . ID=gene-O5C65_000479;Name=O5C65_000479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000479 DALFDA020000003.1 Protein Homology CDS 39616 40917 . - 0 ID=cds-HJH9170653.1;Parent=gene-O5C65_000479;Dbxref=NCBI_GP:HJH9170653.1;Name=HJH9170653.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=O5C65_000479;product=MFS transporter;protein_id=HJH9170653.1;transl_table=11 DALFDA020000003.1 tpg gene 41164 41550 . + . ID=gene-O5C65_000480;Name=O5C65_000480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000480 DALFDA020000003.1 Protein Homology CDS 41164 41550 . + 0 ID=cds-HJH9170654.1;Parent=gene-O5C65_000480;Dbxref=NCBI_GP:HJH9170654.1;Name=HJH9170654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=O5C65_000480;product=DUF3461 family protein;protein_id=HJH9170654.1;transl_table=11 DALFDA020000003.1 tpg gene 41736 44705 . + . ID=gene-O5C65_000481;Name=O5C65_000481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000481 DALFDA020000003.1 Protein Homology CDS 41736 44705 . + 0 ID=cds-HJH9170655.1;Parent=gene-O5C65_000481;Dbxref=NCBI_GP:HJH9170655.1;Name=HJH9170655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527551.1;locus_tag=O5C65_000481;product=putative mucin/carbohydrate-binding domain-containing protein;protein_id=HJH9170655.1;transl_table=11 DALFDA020000003.1 tpg gene 44827 45984 . - . ID=gene-O5C65_000482;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=O5C65_000482 DALFDA020000003.1 Protein Homology CDS 44827 45984 . - 0 ID=cds-HJH9170656.1;Parent=gene-O5C65_000482;Dbxref=NCBI_GP:HJH9170656.1;Name=HJH9170656.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459215.1;locus_tag=O5C65_000482;product=DNA-binding transcriptional regulator CdaR;protein_id=HJH9170656.1;transl_table=11 DALFDA020000003.1 tpg gene 46137 47564 . - . ID=gene-O5C65_000483;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=O5C65_000483 DALFDA020000003.1 Protein Homology CDS 46137 47564 . - 0 ID=cds-HJH9170657.1;Parent=gene-O5C65_000483;Dbxref=NCBI_GP:HJH9170657.1;Name=HJH9170657.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=O5C65_000483;product=serine endoprotease DegP;protein_id=HJH9170657.1;transl_table=11 DALFDA020000003.1 tpg gene 47694 49211 . - . ID=gene-O5C65_000484;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=O5C65_000484 DALFDA020000003.1 Protein Homology CDS 47694 49211 . - 0 ID=cds-HJH9170658.1;Parent=gene-O5C65_000484;Dbxref=NCBI_GP:HJH9170658.1;Name=HJH9170658.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459213.1;locus_tag=O5C65_000484;product=dGTPase;protein_id=HJH9170658.1;transl_table=11 DALFDA020000003.1 tpg gene 49296 49994 . + . ID=gene-O5C65_000485;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=O5C65_000485 DALFDA020000003.1 Protein Homology CDS 49296 49994 . + 0 ID=cds-HJH9170659.1;Parent=gene-O5C65_000485;Dbxref=NCBI_GP:HJH9170659.1;Name=HJH9170659.1;Ontology_term=GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459212.1;locus_tag=O5C65_000485;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=HJH9170659.1;transl_table=11 DALFDA020000003.1 tpg gene 49987 50787 . + . ID=gene-O5C65_000486;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=O5C65_000486 DALFDA020000003.1 Protein Homology CDS 49987 50787 . + 0 ID=cds-HJH9170660.1;Parent=gene-O5C65_000486;Dbxref=NCBI_GP:HJH9170660.1;Name=HJH9170660.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459211.1;locus_tag=O5C65_000486;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=HJH9170660.1;transl_table=11 DALFDA020000003.1 tpg gene 50824 51447 . + . ID=gene-O5C65_000487;Name=O5C65_000487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000487 DALFDA020000003.1 Protein Homology CDS 50824 51447 . + 0 ID=cds-HJH9170661.1;Parent=gene-O5C65_000487;Dbxref=NCBI_GP:HJH9170661.1;Name=HJH9170661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459210.1;locus_tag=O5C65_000487;product=TRIC cation channel family protein;protein_id=HJH9170661.1;transl_table=11 DALFDA020000003.1 tpg gene 51548 51892 . - . ID=gene-O5C65_000488;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=O5C65_000488 DALFDA020000003.1 Protein Homology CDS 51548 51892 . - 0 ID=cds-HJH9170662.1;Parent=gene-O5C65_000488;Dbxref=NCBI_GP:HJH9170662.1;Name=HJH9170662.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=O5C65_000488;product=iron-sulfur cluster insertion protein ErpA;protein_id=HJH9170662.1;transl_table=11 DALFDA020000003.1 tpg gene 51974 53395 . - . ID=gene-O5C65_000489;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=O5C65_000489 DALFDA020000003.1 Protein Homology CDS 51974 53395 . - 0 ID=cds-HJH9170663.1;Parent=gene-O5C65_000489;Dbxref=NCBI_GP:HJH9170663.1;Name=HJH9170663.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459208.1;locus_tag=O5C65_000489;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=HJH9170663.1;transl_table=11 DALFDA020000003.1 tpg gene 53565 54845 . + . ID=gene-O5C65_000490;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=O5C65_000490 DALFDA020000003.1 Protein Homology CDS 53565 54845 . + 0 ID=cds-HJH9170664.1;Parent=gene-O5C65_000490;Dbxref=NCBI_GP:HJH9170664.1;Name=HJH9170664.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=O5C65_000490;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=HJH9170664.1;transl_table=11 DALFDA020000003.1 tpg gene 54944 55786 . - . ID=gene-O5C65_000491;Name=stfH;gbkey=Gene;gene=stfH;gene_biotype=protein_coding;locus_tag=O5C65_000491 DALFDA020000003.1 Protein Homology CDS 54944 55786 . - 0 ID=cds-HJH9170665.1;Parent=gene-O5C65_000491;Dbxref=NCBI_GP:HJH9170665.1;Name=HJH9170665.1;gbkey=CDS;gene=stfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459206.1;locus_tag=O5C65_000491;product=fimbrial adhesin StfH;protein_id=HJH9170665.1;transl_table=11 DALFDA020000003.1 tpg gene 55786 56316 . - . ID=gene-O5C65_000492;Name=O5C65_000492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000492 DALFDA020000003.1 Protein Homology CDS 55786 56316 . - 0 ID=cds-HJH9170666.1;Parent=gene-O5C65_000492;Dbxref=NCBI_GP:HJH9170666.1;Name=HJH9170666.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459205.1;locus_tag=O5C65_000492;product=fimbrial protein;protein_id=HJH9170666.1;transl_table=11 DALFDA020000003.1 tpg gene 56316 56792 . - . ID=gene-O5C65_000493;Name=stfF;gbkey=Gene;gene=stfF;gene_biotype=protein_coding;locus_tag=O5C65_000493 DALFDA020000003.1 Protein Homology CDS 56316 56792 . - 0 ID=cds-HJH9170667.1;Parent=gene-O5C65_000493;Dbxref=NCBI_GP:HJH9170667.1;Name=HJH9170667.1;gbkey=CDS;gene=stfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459204.1;locus_tag=O5C65_000493;product=fimbrial minor subunit StfF;protein_id=HJH9170667.1;transl_table=11 DALFDA020000003.1 tpg gene 56789 57301 . - . ID=gene-O5C65_000494;Name=O5C65_000494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000494 DALFDA020000003.1 Protein Homology CDS 56789 57301 . - 0 ID=cds-HJH9170668.1;Parent=gene-O5C65_000494;Dbxref=NCBI_GP:HJH9170668.1;Name=HJH9170668.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459203.1;locus_tag=O5C65_000494;product=fimbrial protein;protein_id=HJH9170668.1;transl_table=11 DALFDA020000003.1 tpg gene 57320 58072 . - . ID=gene-O5C65_000495;Name=stfD;gbkey=Gene;gene=stfD;gene_biotype=protein_coding;locus_tag=O5C65_000495 DALFDA020000003.1 Protein Homology CDS 57320 58072 . - 0 ID=cds-HJH9170669.1;Parent=gene-O5C65_000495;Dbxref=NCBI_GP:HJH9170669.1;Name=HJH9170669.1;gbkey=CDS;gene=stfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459202.1;locus_tag=O5C65_000495;product=fimbrial chaperone StfD;protein_id=HJH9170669.1;transl_table=11 DALFDA020000003.1 tpg gene 58090 60747 . - . ID=gene-O5C65_000496;Name=O5C65_000496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000496 DALFDA020000003.1 Protein Homology CDS 58090 60747 . - 0 ID=cds-HJH9170670.1;Parent=gene-O5C65_000496;Dbxref=NCBI_GP:HJH9170670.1;Name=HJH9170670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459201.1;locus_tag=O5C65_000496;product=fimbrial biogenesis outer membrane usher protein;protein_id=HJH9170670.1;transl_table=11 DALFDA020000003.1 tpg gene 60833 61393 . - . ID=gene-O5C65_000497;Name=stfA;gbkey=Gene;gene=stfA;gene_biotype=protein_coding;locus_tag=O5C65_000497 DALFDA020000003.1 Protein Homology CDS 60833 61393 . - 0 ID=cds-HJH9170671.1;Parent=gene-O5C65_000497;Dbxref=NCBI_GP:HJH9170671.1;Name=HJH9170671.1;gbkey=CDS;gene=stfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459200.1;locus_tag=O5C65_000497;product=fimbrial major subunit StfA;protein_id=HJH9170671.1;transl_table=11 DALFDA020000003.1 tpg gene 61982 62296 . - . ID=gene-O5C65_000498;Name=O5C65_000498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000498 DALFDA020000003.1 GeneMarkS-2+ CDS 61982 62296 . - 0 ID=cds-HJH9170672.1;Parent=gene-O5C65_000498;Dbxref=NCBI_GP:HJH9170672.1;Name=HJH9170672.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_000498;product=hypothetical protein;protein_id=HJH9170672.1;transl_table=11 DALFDA020000003.1 tpg gene 62332 64371 . - . ID=gene-O5C65_000499;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=O5C65_000499 DALFDA020000003.1 Protein Homology CDS 62332 64371 . - 0 ID=cds-HJH9170673.1;Parent=gene-O5C65_000499;Dbxref=NCBI_GP:HJH9170673.1;Name=HJH9170673.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504759.1;locus_tag=O5C65_000499;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=HJH9170673.1;transl_table=11 DALFDA020000003.1 tpg gene 64386 65276 . - . ID=gene-O5C65_000500;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=O5C65_000500 DALFDA020000003.1 Protein Homology CDS 64386 65276 . - 0 ID=cds-HJH9170674.1;Parent=gene-O5C65_000500;Dbxref=NCBI_GP:HJH9170674.1;Name=HJH9170674.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459198.1;locus_tag=O5C65_000500;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=HJH9170674.1;transl_table=11 DALFDA020000003.1 tpg gene 65276 66073 . - . ID=gene-O5C65_000501;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=O5C65_000501 DALFDA020000003.1 Protein Homology CDS 65276 66073 . - 0 ID=cds-HJH9170675.1;Parent=gene-O5C65_000501;Dbxref=NCBI_GP:HJH9170675.1;Name=HJH9170675.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459197.1;locus_tag=O5C65_000501;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=HJH9170675.1;transl_table=11 DALFDA020000003.1 tpg gene 66122 68311 . - . ID=gene-O5C65_000502;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=O5C65_000502 DALFDA020000003.1 Protein Homology CDS 66122 68311 . - 0 ID=cds-HJH9170676.1;Parent=gene-O5C65_000502;Dbxref=NCBI_GP:HJH9170676.1;Name=HJH9170676.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459196.1;locus_tag=O5C65_000502;product=ferrichrome porin FhuA;protein_id=HJH9170676.1;transl_table=11 DALFDA020000003.1 tpg gene 68604 71126 . - . ID=gene-O5C65_000503;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=O5C65_000503 DALFDA020000003.1 Protein Homology CDS 68604 71126 . - 0 ID=cds-HJH9170677.1;Parent=gene-O5C65_000503;Dbxref=NCBI_GP:HJH9170677.1;Name=HJH9170677.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459195.1;locus_tag=O5C65_000503;product=bifunctional glycosyl transferase/transpeptidase;protein_id=HJH9170677.1;transl_table=11 DALFDA020000003.1 tpg gene 71267 73696 . - . ID=gene-O5C65_000504;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=O5C65_000504 DALFDA020000003.1 Protein Homology CDS 71267 73696 . - 0 ID=cds-HJH9170678.1;Parent=gene-O5C65_000504;Dbxref=NCBI_GP:HJH9170678.1;Name=HJH9170678.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414690.4;locus_tag=O5C65_000504;product=ATP-dependent helicase HrpB;protein_id=HJH9170678.1;transl_table=11 DALFDA020000003.1 tpg gene 73769 74299 . + . ID=gene-O5C65_000505;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=O5C65_000505 DALFDA020000003.1 Protein Homology CDS 73769 74299 . + 0 ID=cds-HJH9170679.1;Parent=gene-O5C65_000505;Dbxref=NCBI_GP:HJH9170679.1;Name=HJH9170679.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459193.1;locus_tag=O5C65_000505;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=HJH9170679.1;transl_table=11 DALFDA020000003.1 tpg gene 74316 75020 . + . ID=gene-O5C65_000506;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=O5C65_000506 DALFDA020000003.1 Protein Homology CDS 74316 75020 . + 0 ID=cds-HJH9170680.1;Parent=gene-O5C65_000506;Dbxref=NCBI_GP:HJH9170680.1;Name=HJH9170680.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459192.1;locus_tag=O5C65_000506;product=DNA/RNA nuclease SfsA;protein_id=HJH9170680.1;transl_table=11 DALFDA020000003.1 tpg gene 75197 75652 . + . ID=gene-O5C65_000507;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=O5C65_000507 DALFDA020000003.1 Protein Homology CDS 75197 75652 . + 0 ID=cds-HJH9170681.1;Parent=gene-O5C65_000507;Dbxref=NCBI_GP:HJH9170681.1;Name=HJH9170681.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=O5C65_000507;product=RNA polymerase-binding protein DksA;protein_id=HJH9170681.1;transl_table=11 DALFDA020000003.1 tpg gene 75721 76617 . + . ID=gene-O5C65_000508;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=O5C65_000508 DALFDA020000003.1 Protein Homology CDS 75721 76617 . + 0 ID=cds-HJH9170682.1;Parent=gene-O5C65_000508;Dbxref=NCBI_GP:HJH9170682.1;Name=HJH9170682.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549989.1;locus_tag=O5C65_000508;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=HJH9170682.1;transl_table=11 DALFDA020000003.1 tpg gene 76779 78176 . + . ID=gene-O5C65_000509;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=O5C65_000509 DALFDA020000003.1 Protein Homology CDS 76779 78176 . + 0 ID=cds-HJH9170683.1;Parent=gene-O5C65_000509;Dbxref=NCBI_GP:HJH9170683.1;Name=HJH9170683.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=O5C65_000509;product=polynucleotide adenylyltransferase PcnB;protein_id=HJH9170683.1;transl_table=11 DALFDA020000003.1 tpg gene 78173 78652 . + . ID=gene-O5C65_000510;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=O5C65_000510 DALFDA020000003.1 Protein Homology CDS 78173 78652 . + 0 ID=cds-HJH9170684.1;Parent=gene-O5C65_000510;Dbxref=NCBI_GP:HJH9170684.1;Name=HJH9170684.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459188.1;locus_tag=O5C65_000510;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=HJH9170684.1;transl_table=11 DALFDA020000003.1 tpg gene 78773 79564 . + . ID=gene-O5C65_000511;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=O5C65_000511 DALFDA020000003.1 Protein Homology CDS 78773 79564 . + 0 ID=cds-HJH9170685.1;Parent=gene-O5C65_000511;Dbxref=NCBI_GP:HJH9170685.1;Name=HJH9170685.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=O5C65_000511;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=HJH9170685.1;transl_table=11 DALFDA020000003.1 tpg gene 79690 80544 . + . ID=gene-O5C65_000512;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=O5C65_000512 DALFDA020000003.1 Protein Homology CDS 79690 80544 . + 0 ID=cds-HJH9170686.1;Parent=gene-O5C65_000512;Dbxref=NCBI_GP:HJH9170686.1;Name=HJH9170686.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459186.1;locus_tag=O5C65_000512;product=pantoate--beta-alanine ligase;protein_id=HJH9170686.1;transl_table=11 DALFDA020000003.1 tpg gene 80639 81019 . + . ID=gene-O5C65_000513;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=O5C65_000513 DALFDA020000003.1 Protein Homology CDS 80639 81019 . + 0 ID=cds-HJH9170687.1;Parent=gene-O5C65_000513;Dbxref=NCBI_GP:HJH9170687.1;Name=HJH9170687.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=O5C65_000513;product=aspartate 1-decarboxylase;protein_id=HJH9170687.1;transl_table=11 DALFDA020000003.1 tpg pseudogene 81026 82255 . - . ID=gene-O5C65_000514;Name=O5C65_000514;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_000514;pseudo=true DALFDA020000003.1 Protein Homology CDS 81026 82255 . - 0 ID=cds-O5C65_000514;Parent=gene-O5C65_000514;Note=internal stop;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459184.1;locus_tag=O5C65_000514;product=polysaccharide deacetylase family protein;pseudo=true;transl_table=11 DALFDA020000003.1 tpg gene 82317 82757 . - . ID=gene-O5C65_000515;Name=O5C65_000515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000515 DALFDA020000003.1 Protein Homology CDS 82317 82757 . - 0 ID=cds-HJH9170688.1;Parent=gene-O5C65_000515;Dbxref=NCBI_GP:HJH9170688.1;Name=HJH9170688.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459183.1;locus_tag=O5C65_000515;product=PTS sugar transporter subunit IIA;protein_id=HJH9170688.1;transl_table=11 DALFDA020000003.1 tpg gene 82862 83632 . - . ID=gene-O5C65_000516;Name=O5C65_000516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000516 DALFDA020000003.1 Protein Homology CDS 82862 83632 . - 0 ID=cds-HJH9170689.1;Parent=gene-O5C65_000516;Dbxref=NCBI_GP:HJH9170689.1;Name=HJH9170689.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=O5C65_000516;product=ABC transporter permease;protein_id=HJH9170689.1;transl_table=11 DALFDA020000003.1 tpg gene 83629 84555 . - . ID=gene-O5C65_000517;Name=O5C65_000517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000517 DALFDA020000003.1 Protein Homology CDS 83629 84555 . - 0 ID=cds-HJH9170690.1;Parent=gene-O5C65_000517;Dbxref=NCBI_GP:HJH9170690.1;Name=HJH9170690.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459177.1;locus_tag=O5C65_000517;product=ABC transporter ATP-binding protein;protein_id=HJH9170690.1;transl_table=11 DALFDA020000003.1 tpg gene 84664 85326 . + . ID=gene-O5C65_000518;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=O5C65_000518 DALFDA020000003.1 Protein Homology CDS 84664 85326 . + 0 ID=cds-HJH9170691.1;Parent=gene-O5C65_000518;Dbxref=NCBI_GP:HJH9170691.1;Name=HJH9170691.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459176.1;locus_tag=O5C65_000518;product=carbonate dehydratase;protein_id=HJH9170691.1;transl_table=11 DALFDA020000003.1 tpg gene 85384 85920 . - . ID=gene-O5C65_000519;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=O5C65_000519 DALFDA020000003.1 Protein Homology CDS 85384 85920 . - 0 ID=cds-HJH9170692.1;Parent=gene-O5C65_000519;Dbxref=NCBI_GP:HJH9170692.1;Name=HJH9170692.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=O5C65_000519;product=hypoxanthine phosphoribosyltransferase;protein_id=HJH9170692.1;transl_table=11 DALFDA020000003.1 tpg gene 86126 88516 . + . ID=gene-O5C65_000520;Name=O5C65_000520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000520 DALFDA020000003.1 Protein Homology CDS 86126 88516 . + 0 ID=cds-HJH9170693.1;Parent=gene-O5C65_000520;Dbxref=NCBI_GP:HJH9170693.1;Name=HJH9170693.1;Ontology_term=GO:0016614,GO:0048038,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459174.1;locus_tag=O5C65_000520;product=glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase;protein_id=HJH9170693.1;transl_table=11 DALFDA020000003.1 tpg gene 88594 90204 . - . ID=gene-O5C65_000521;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=O5C65_000521 DALFDA020000003.1 Protein Homology CDS 88594 90204 . - 0 ID=cds-HJH9170694.1;Parent=gene-O5C65_000521;Dbxref=NCBI_GP:HJH9170694.1;Name=HJH9170694.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459173.1;locus_tag=O5C65_000521;product=multicopper oxidase CueO;protein_id=HJH9170694.1;transl_table=11 DALFDA020000003.1 tpg gene 90406 90753 . + . ID=gene-O5C65_000522;Name=O5C65_000522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000522 DALFDA020000003.1 Protein Homology CDS 90406 90753 . + 0 ID=cds-HJH9170695.1;Parent=gene-O5C65_000522;Dbxref=NCBI_GP:HJH9170695.1;Name=HJH9170695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459172.1;locus_tag=O5C65_000522;product=YacC family pilotin-like protein;protein_id=HJH9170695.1;transl_table=11 DALFDA020000003.1 tpg gene 90860 91720 . + . ID=gene-O5C65_000523;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=O5C65_000523 DALFDA020000003.1 Protein Homology CDS 90860 91720 . + 0 ID=cds-HJH9170696.1;Parent=gene-O5C65_000523;Dbxref=NCBI_GP:HJH9170696.1;Name=HJH9170696.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459171.1;locus_tag=O5C65_000523;product=polyamine aminopropyltransferase;protein_id=HJH9170696.1;transl_table=11 DALFDA020000003.1 tpg gene 91741 92535 . + . ID=gene-O5C65_000524;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=O5C65_000524 DALFDA020000003.1 Protein Homology CDS 91741 92535 . + 0 ID=cds-HJH9170697.1;Parent=gene-O5C65_000524;Dbxref=NCBI_GP:HJH9170697.1;Name=HJH9170697.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459170.1;locus_tag=O5C65_000524;product=adenosylmethionine decarboxylase;protein_id=HJH9170697.1;transl_table=11 DALFDA020000003.1 tpg gene 92565 93332 . - . ID=gene-O5C65_000525;Name=O5C65_000525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000525 DALFDA020000003.1 Protein Homology CDS 92565 93332 . - 0 ID=cds-HJH9170698.1;Parent=gene-O5C65_000525;Dbxref=NCBI_GP:HJH9170698.1;Name=HJH9170698.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459169.1;locus_tag=O5C65_000525;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=HJH9170698.1;transl_table=11 DALFDA020000003.1 tpg gene 93342 94325 . - . ID=gene-O5C65_000526;Name=O5C65_000526;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000526 DALFDA020000003.1 Protein Homology CDS 93342 94325 . - 0 ID=cds-HJH9170699.1;Parent=gene-O5C65_000526;Dbxref=NCBI_GP:HJH9170699.1;Name=HJH9170699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459168.1;locus_tag=O5C65_000526;product=D-threonate 4-phosphate dehydrogenase;protein_id=HJH9170699.1;transl_table=11 DALFDA020000003.1 tpg gene 94315 95586 . - . ID=gene-O5C65_000527;Name=dtnK;gbkey=Gene;gene=dtnK;gene_biotype=protein_coding;locus_tag=O5C65_000527 DALFDA020000003.1 Protein Homology CDS 94315 95586 . - 0 ID=cds-HJH9170700.1;Parent=gene-O5C65_000527;Dbxref=NCBI_GP:HJH9170700.1;Name=HJH9170700.1;Ontology_term=GO:0005524,GO:0016301;gbkey=CDS;gene=dtnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459167.1;locus_tag=O5C65_000527;product=D-threonate kinase;protein_id=HJH9170700.1;transl_table=11 DALFDA020000003.1 tpg gene 95583 96536 . - . ID=gene-O5C65_000528;Name=O5C65_000528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000528 DALFDA020000003.1 Protein Homology CDS 95583 96536 . - 0 ID=cds-HJH9170701.1;Parent=gene-O5C65_000528;Dbxref=NCBI_GP:HJH9170701.1;Name=HJH9170701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459166.1;locus_tag=O5C65_000528;product=2-keto-3-deoxygluconate permease 1;protein_id=HJH9170701.1;transl_table=11 DALFDA020000003.1 tpg gene 96771 97133 . - . ID=gene-O5C65_000529;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=O5C65_000529 DALFDA020000003.1 Protein Homology CDS 96771 97133 . - 0 ID=cds-HJH9170702.1;Parent=gene-O5C65_000529;Dbxref=NCBI_GP:HJH9170702.1;Name=HJH9170702.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459165.1;locus_tag=O5C65_000529;product=protein YacL;protein_id=HJH9170702.1;transl_table=11 DALFDA020000003.1 tpg gene 97404 97727 . + . ID=gene-O5C65_000530;Name=O5C65_000530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000530 DALFDA020000003.1 Protein Homology CDS 97404 97727 . + 0 ID=cds-HJH9170703.1;Parent=gene-O5C65_000530;Dbxref=NCBI_GP:HJH9170703.1;Name=HJH9170703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101536.1;locus_tag=O5C65_000530;product=low molecular weight protein tyrosine phosphatase family protein;protein_id=HJH9170703.1;transl_table=11 DALFDA020000003.1 tpg gene 98137 98601 . + . ID=gene-O5C65_000531;Name=O5C65_000531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000531 DALFDA020000003.1 Protein Homology CDS 98137 98601 . + 0 ID=cds-HJH9170704.1;Parent=gene-O5C65_000531;Dbxref=NCBI_GP:HJH9170704.1;Name=HJH9170704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110434.1;locus_tag=O5C65_000531;product=hypothetical protein;protein_id=HJH9170704.1;transl_table=11 DALFDA020000003.1 tpg gene 98641 101238 . - . ID=gene-O5C65_000532;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=O5C65_000532 DALFDA020000003.1 Protein Homology CDS 98641 101238 . - 0 ID=cds-HJH9170705.1;Parent=gene-O5C65_000532;Dbxref=NCBI_GP:HJH9170705.1;Name=HJH9170705.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080489.1;locus_tag=O5C65_000532;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=HJH9170705.1;transl_table=11 DALFDA020000003.1 tpg gene 101627 103255 . + . ID=gene-O5C65_000533;Name=O5C65_000533;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000533 DALFDA020000003.1 Protein Homology CDS 101627 103255 . + 0 ID=cds-HJH9170706.1;Parent=gene-O5C65_000533;Dbxref=NCBI_GP:HJH9170706.1;Name=HJH9170706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459162.2;locus_tag=O5C65_000533;product=DUF3300 domain-containing protein;protein_id=HJH9170706.1;transl_table=11 DALFDA020000003.1 tpg gene 103268 104059 . + . ID=gene-O5C65_000534;Name=O5C65_000534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000534 DALFDA020000003.1 Protein Homology CDS 103268 104059 . + 0 ID=cds-HJH9170707.1;Parent=gene-O5C65_000534;Dbxref=NCBI_GP:HJH9170707.1;Name=HJH9170707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459161.1;locus_tag=O5C65_000534;product=DUF2950 family protein;protein_id=HJH9170707.1;transl_table=11 DALFDA020000003.1 tpg gene 104097 104381 . - . ID=gene-O5C65_000535;Name=O5C65_000535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000535 DALFDA020000003.1 Protein Homology CDS 104097 104381 . - 0 ID=cds-HJH9170708.1;Parent=gene-O5C65_000535;Dbxref=NCBI_GP:HJH9170708.1;Name=HJH9170708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459160.1;locus_tag=O5C65_000535;product=hypothetical protein;protein_id=HJH9170708.1;transl_table=11 DALFDA020000003.1 tpg gene 104670 106094 . - . ID=gene-O5C65_000536;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=O5C65_000536 DALFDA020000003.1 Protein Homology CDS 104670 106094 . - 0 ID=cds-HJH9170709.1;Parent=gene-O5C65_000536;Dbxref=NCBI_GP:HJH9170709.1;Name=HJH9170709.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=O5C65_000536;product=dihydrolipoyl dehydrogenase;protein_id=HJH9170709.1;transl_table=11 DALFDA020000003.1 tpg gene 106295 108184 . - . ID=gene-O5C65_000537;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=O5C65_000537 DALFDA020000003.1 Protein Homology CDS 106295 108184 . - 0 ID=cds-HJH9170710.1;Parent=gene-O5C65_000537;Dbxref=NCBI_GP:HJH9170710.1;Name=HJH9170710.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459158.2;locus_tag=O5C65_000537;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=HJH9170710.1;transl_table=11 DALFDA020000003.1 tpg gene 108199 110862 . - . ID=gene-O5C65_000538;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=O5C65_000538 DALFDA020000003.1 Protein Homology CDS 108199 110862 . - 0 ID=cds-HJH9170711.1;Parent=gene-O5C65_000538;Dbxref=NCBI_GP:HJH9170711.1;Name=HJH9170711.1;Ontology_term=GO:0006086,GO:0004738,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=O5C65_000538;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=HJH9170711.1;transl_table=11 DALFDA020000003.1 tpg gene 111169 111933 . - . ID=gene-O5C65_000539;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=O5C65_000539 DALFDA020000003.1 Protein Homology CDS 111169 111933 . - 0 ID=cds-HJH9170712.1;Parent=gene-O5C65_000539;Dbxref=NCBI_GP:HJH9170712.1;Name=HJH9170712.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459156.1;locus_tag=O5C65_000539;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=HJH9170712.1;transl_table=11 DALFDA020000003.1 tpg gene 112496 113869 . + . ID=gene-O5C65_000540;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=O5C65_000540 DALFDA020000003.1 Protein Homology CDS 112496 113869 . + 0 ID=cds-HJH9170713.1;Parent=gene-O5C65_000540;Dbxref=NCBI_GP:HJH9170713.1;Name=HJH9170713.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459155.1;locus_tag=O5C65_000540;product=aromatic amino acid transporter AroP;protein_id=HJH9170713.1;transl_table=11 DALFDA020000003.1 tpg gene 114033 115439 . + . ID=gene-O5C65_000541;Name=O5C65_000541;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000541 DALFDA020000003.1 Protein Homology CDS 114033 115439 . + 0 ID=cds-HJH9170714.1;Parent=gene-O5C65_000541;Dbxref=NCBI_GP:HJH9170714.1;Name=HJH9170714.1;Ontology_term=GO:0006812,GO:0008643,GO:0015486,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glycoside-pentoside-hexuronide:cation symporter activity|0015486||IEA;go_process=monoatomic cation transport|0006812||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459154.1;locus_tag=O5C65_000541;product=glycoside-pentoside-hexuronide (GPH):cation symporter;protein_id=HJH9170714.1;transl_table=11 DALFDA020000003.1 tpg gene 115439 116389 . + . ID=gene-O5C65_000542;Name=O5C65_000542;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000542 DALFDA020000003.1 Protein Homology CDS 115439 116389 . + 0 ID=cds-HJH9170715.1;Parent=gene-O5C65_000542;Dbxref=NCBI_GP:HJH9170715.1;Name=HJH9170715.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459153.1;locus_tag=O5C65_000542;product=glycoside hydrolase family 43 protein;protein_id=HJH9170715.1;transl_table=11 DALFDA020000003.1 tpg gene 116481 117335 . - . ID=gene-O5C65_000543;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=O5C65_000543 DALFDA020000003.1 Protein Homology CDS 116481 117335 . - 0 ID=cds-HJH9170716.1;Parent=gene-O5C65_000543;Dbxref=NCBI_GP:HJH9170716.1;Name=HJH9170716.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459152.1;locus_tag=O5C65_000543;product=beta-lactamase regulator AmpE;protein_id=HJH9170716.1;transl_table=11 DALFDA020000003.1 tpg gene 117332 117895 . - . ID=gene-O5C65_000544;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=O5C65_000544 DALFDA020000003.1 Protein Homology CDS 117332 117895 . - 0 ID=cds-HJH9170717.1;Parent=gene-O5C65_000544;Dbxref=NCBI_GP:HJH9170717.1;Name=HJH9170717.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459151.1;locus_tag=O5C65_000544;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=HJH9170717.1;transl_table=11 DALFDA020000003.1 tpg gene 117983 118876 . + . ID=gene-O5C65_000545;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=O5C65_000545 DALFDA020000003.1 Protein Homology CDS 117983 118876 . + 0 ID=cds-HJH9170718.1;Parent=gene-O5C65_000545;Dbxref=NCBI_GP:HJH9170718.1;Name=HJH9170718.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308140.1;locus_tag=O5C65_000545;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=HJH9170718.1;transl_table=11 DALFDA020000003.1 tpg gene 119098 119535 . + . ID=gene-O5C65_000546;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=O5C65_000546 DALFDA020000003.1 Protein Homology CDS 119098 119535 . + 0 ID=cds-HJH9170719.1;Parent=gene-O5C65_000546;Dbxref=NCBI_GP:HJH9170719.1;Name=HJH9170719.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459149.1;locus_tag=O5C65_000546;product=prepilin peptidase-dependent pilin;protein_id=HJH9170719.1;transl_table=11 DALFDA020000003.1 tpg gene 119545 120930 . + . ID=gene-O5C65_000547;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=O5C65_000547 DALFDA020000003.1 Protein Homology CDS 119545 120930 . + 0 ID=cds-HJH9170720.1;Parent=gene-O5C65_000547;Dbxref=NCBI_GP:HJH9170720.1;Name=HJH9170720.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459148.1;locus_tag=O5C65_000547;product=type II secretion system protein GspE;protein_id=HJH9170720.1;transl_table=11 DALFDA020000003.1 tpg gene 120920 122122 . + . ID=gene-O5C65_000548;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=O5C65_000548 DALFDA020000003.1 Protein Homology CDS 120920 122122 . + 0 ID=cds-HJH9170721.1;Parent=gene-O5C65_000548;Dbxref=NCBI_GP:HJH9170721.1;Name=HJH9170721.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459147.1;locus_tag=O5C65_000548;product=protein transport protein HofC;protein_id=HJH9170721.1;transl_table=11 DALFDA020000003.1 tpg gene 122153 123196 . - . ID=gene-O5C65_000549;Name=O5C65_000549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000549 DALFDA020000003.1 Protein Homology CDS 122153 123196 . - 0 ID=cds-HJH9170722.1;Parent=gene-O5C65_000549;Dbxref=NCBI_GP:HJH9170722.1;Name=HJH9170722.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=O5C65_000549;product=GMP reductase;protein_id=HJH9170722.1;transl_table=11 DALFDA020000003.1 tpg gene 123422 124042 . + . ID=gene-O5C65_000550;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=O5C65_000550 DALFDA020000003.1 Protein Homology CDS 123422 124042 . + 0 ID=cds-HJH9170723.1;Parent=gene-O5C65_000550;Dbxref=NCBI_GP:HJH9170723.1;Name=HJH9170723.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459145.1;locus_tag=O5C65_000550;product=dephospho-CoA kinase;protein_id=HJH9170723.1;transl_table=11 DALFDA020000003.1 tpg gene 124042 124785 . + . ID=gene-O5C65_000551;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=O5C65_000551 DALFDA020000003.1 Protein Homology CDS 124042 124785 . + 0 ID=cds-HJH9170724.1;Parent=gene-O5C65_000551;Dbxref=NCBI_GP:HJH9170724.1;Name=HJH9170724.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459144.1;locus_tag=O5C65_000551;product=cell division protein ZapD;protein_id=HJH9170724.1;transl_table=11 DALFDA020000003.1 tpg gene 124795 124986 . + . ID=gene-O5C65_000552;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=O5C65_000552 DALFDA020000003.1 Protein Homology CDS 124795 124986 . + 0 ID=cds-HJH9170725.1;Parent=gene-O5C65_000552;Dbxref=NCBI_GP:HJH9170725.1;Name=HJH9170725.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459143.1;locus_tag=O5C65_000552;product=DNA gyrase inhibitor YacG;protein_id=HJH9170725.1;transl_table=11 DALFDA020000003.1 tpg gene 124983 125924 . - . ID=gene-O5C65_000553;Name=O5C65_000553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000553 DALFDA020000003.1 Protein Homology CDS 124983 125924 . - 0 ID=cds-HJH9170726.1;Parent=gene-O5C65_000553;Dbxref=NCBI_GP:HJH9170726.1;Name=HJH9170726.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001622534.1;locus_tag=O5C65_000553;product=LysR family transcriptional regulator;protein_id=HJH9170726.1;transl_table=11 DALFDA020000003.1 tpg gene 126010 126999 . + . ID=gene-O5C65_000554;Name=O5C65_000554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000554 DALFDA020000003.1 Protein Homology CDS 126010 126999 . + 0 ID=cds-HJH9170727.1;Parent=gene-O5C65_000554;Dbxref=NCBI_GP:HJH9170727.1;Name=HJH9170727.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200034.1;locus_tag=O5C65_000554;product=aldo/keto reductase;protein_id=HJH9170727.1;transl_table=11 DALFDA020000003.1 tpg gene 127033 127428 . - . ID=gene-O5C65_000555;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=O5C65_000555 DALFDA020000003.1 Protein Homology CDS 127033 127428 . - 0 ID=cds-HJH9170728.1;Parent=gene-O5C65_000555;Dbxref=NCBI_GP:HJH9170728.1;Name=HJH9170728.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000736055.1;locus_tag=O5C65_000555;product=8-oxo-dGTP diphosphatase MutT;protein_id=HJH9170728.1;transl_table=11 DALFDA020000003.1 tpg gene 127584 130289 . - . ID=gene-O5C65_000556;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=O5C65_000556 DALFDA020000003.1 Protein Homology CDS 127584 130289 . - 0 ID=cds-HJH9170729.1;Parent=gene-O5C65_000556;Dbxref=NCBI_GP:HJH9170729.1;Name=HJH9170729.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459141.1;locus_tag=O5C65_000556;product=preprotein translocase subunit SecA;protein_id=HJH9170729.1;transl_table=11 DALFDA020000003.1 tpg gene 130351 130848 . - . ID=gene-O5C65_000557;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=O5C65_000557 DALFDA020000003.1 Protein Homology CDS 130351 130848 . - 0 ID=cds-HJH9170730.1;Parent=gene-O5C65_000557;Dbxref=NCBI_GP:HJH9170730.1;Name=HJH9170730.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308128.2;locus_tag=O5C65_000557;product=secA translation cis-regulator SecM;protein_id=HJH9170730.1;transl_table=11 DALFDA020000003.1 tpg gene 131127 132044 . - . ID=gene-O5C65_000558;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=O5C65_000558 DALFDA020000003.1 Protein Homology CDS 131127 132044 . - 0 ID=cds-HJH9170731.1;Parent=gene-O5C65_000558;Dbxref=NCBI_GP:HJH9170731.1;Name=HJH9170731.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459139.1;locus_tag=O5C65_000558;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=HJH9170731.1;transl_table=11 DALFDA020000003.1 tpg gene 132145 133296 . - . ID=gene-O5C65_000559;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=O5C65_000559 DALFDA020000003.1 Protein Homology CDS 132145 133296 . - 0 ID=cds-HJH9170732.1;Parent=gene-O5C65_000559;Dbxref=NCBI_GP:HJH9170732.1;Name=HJH9170732.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=O5C65_000559;product=cell division protein FtsZ;protein_id=HJH9170732.1;transl_table=11 DALFDA020000003.1 tpg gene 133357 134619 . - . ID=gene-O5C65_000560;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=O5C65_000560 DALFDA020000003.1 Protein Homology CDS 133357 134619 . - 0 ID=cds-HJH9170733.1;Parent=gene-O5C65_000560;Dbxref=NCBI_GP:HJH9170733.1;Name=HJH9170733.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459137.1;locus_tag=O5C65_000560;product=cell division protein FtsA;protein_id=HJH9170733.1;transl_table=11 DALFDA020000003.1 tpg gene 134616 135446 . - . ID=gene-O5C65_000561;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=O5C65_000561 DALFDA020000003.1 Protein Homology CDS 134616 135446 . - 0 ID=cds-HJH9170734.1;Parent=gene-O5C65_000561;Dbxref=NCBI_GP:HJH9170734.1;Name=HJH9170734.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459136.1;locus_tag=O5C65_000561;product=cell division protein FtsQ;protein_id=HJH9170734.1;transl_table=11 DALFDA020000003.1 tpg gene 135448 136368 . - . ID=gene-O5C65_000562;Name=O5C65_000562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000562 DALFDA020000003.1 Protein Homology CDS 135448 136368 . - 0 ID=cds-HJH9170735.1;Parent=gene-O5C65_000562;Dbxref=NCBI_GP:HJH9170735.1;Name=HJH9170735.1;Ontology_term=GO:0009252,GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459135.1;locus_tag=O5C65_000562;product=D-alanine--D-alanine ligase;protein_id=HJH9170735.1;transl_table=11 DALFDA020000003.1 tpg gene 136361 137836 . - . ID=gene-O5C65_000563;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=O5C65_000563 DALFDA020000003.1 Protein Homology CDS 136361 137836 . - 0 ID=cds-HJH9170736.1;Parent=gene-O5C65_000563;Dbxref=NCBI_GP:HJH9170736.1;Name=HJH9170736.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459134.1;locus_tag=O5C65_000563;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=HJH9170736.1;transl_table=11 DALFDA020000003.1 tpg gene 137955 139022 . - . ID=gene-O5C65_000564;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=O5C65_000564 DALFDA020000003.1 Protein Homology CDS 137955 139022 . - 0 ID=cds-HJH9170737.1;Parent=gene-O5C65_000564;Dbxref=NCBI_GP:HJH9170737.1;Name=HJH9170737.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459133.1;locus_tag=O5C65_000564;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=HJH9170737.1;transl_table=11 DALFDA020000003.1 tpg gene 139019 140263 . - . ID=gene-O5C65_000565;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=O5C65_000565 DALFDA020000003.1 Protein Homology CDS 139019 140263 . - 0 ID=cds-HJH9170738.1;Parent=gene-O5C65_000565;Dbxref=NCBI_GP:HJH9170738.1;Name=HJH9170738.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459132.1;locus_tag=O5C65_000565;product=cell division protein FtsW;protein_id=HJH9170738.1;transl_table=11 DALFDA020000003.1 tpg gene 140263 141579 . - . ID=gene-O5C65_000566;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=O5C65_000566 DALFDA020000003.1 Protein Homology CDS 140263 141579 . - 0 ID=cds-HJH9170739.1;Parent=gene-O5C65_000566;Dbxref=NCBI_GP:HJH9170739.1;Name=HJH9170739.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=O5C65_000566;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=HJH9170739.1;transl_table=11 DALFDA020000003.1 tpg gene 141582 142664 . - . ID=gene-O5C65_000567;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=O5C65_000567 DALFDA020000003.1 Protein Homology CDS 141582 142664 . - 0 ID=cds-HJH9170740.1;Parent=gene-O5C65_000567;Dbxref=NCBI_GP:HJH9170740.1;Name=HJH9170740.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=O5C65_000567;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=HJH9170740.1;transl_table=11 DALFDA020000003.1 tpg gene 142658 144016 . - . ID=gene-O5C65_000568;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=O5C65_000568 DALFDA020000003.1 Protein Homology CDS 142658 144016 . - 0 ID=cds-HJH9170741.1;Parent=gene-O5C65_000568;Dbxref=NCBI_GP:HJH9170741.1;Name=HJH9170741.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459129.1;locus_tag=O5C65_000568;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=HJH9170741.1;transl_table=11 DALFDA020000003.1 tpg gene 144013 145500 . - . ID=gene-O5C65_000569;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=O5C65_000569 DALFDA020000003.1 Protein Homology CDS 144013 145500 . - 0 ID=cds-HJH9170742.1;Parent=gene-O5C65_000569;Dbxref=NCBI_GP:HJH9170742.1;Name=HJH9170742.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459128.1;locus_tag=O5C65_000569;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=HJH9170742.1;transl_table=11 DALFDA020000003.1 tpg gene 145487 147253 . - . ID=gene-O5C65_000570;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=O5C65_000570 DALFDA020000003.1 Protein Homology CDS 145487 147253 . - 0 ID=cds-HJH9170743.1;Parent=gene-O5C65_000570;Dbxref=NCBI_GP:HJH9170743.1;Name=HJH9170743.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=O5C65_000570;product=peptidoglycan glycosyltransferase FtsI;protein_id=HJH9170743.1;transl_table=11 DALFDA020000003.1 tpg gene 147269 147634 . - . ID=gene-O5C65_000571;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=O5C65_000571 DALFDA020000003.1 Protein Homology CDS 147269 147634 . - 0 ID=cds-HJH9170744.1;Parent=gene-O5C65_000571;Dbxref=NCBI_GP:HJH9170744.1;Name=HJH9170744.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=O5C65_000571;product=cell division protein FtsL;protein_id=HJH9170744.1;transl_table=11 DALFDA020000003.1 tpg gene 147631 148572 . - . ID=gene-O5C65_000572;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=O5C65_000572 DALFDA020000003.1 Protein Homology CDS 147631 148572 . - 0 ID=cds-HJH9170745.1;Parent=gene-O5C65_000572;Dbxref=NCBI_GP:HJH9170745.1;Name=HJH9170745.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=O5C65_000572;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=HJH9170745.1;transl_table=11 DALFDA020000003.1 tpg gene 148574 149032 . - . ID=gene-O5C65_000573;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=O5C65_000573 DALFDA020000003.1 Protein Homology CDS 148574 149032 . - 0 ID=cds-HJH9170746.1;Parent=gene-O5C65_000573;Dbxref=NCBI_GP:HJH9170746.1;Name=HJH9170746.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=O5C65_000573;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=HJH9170746.1;transl_table=11 DALFDA020000003.1 tpg gene 149639 150643 . - . ID=gene-O5C65_000574;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=O5C65_000574 DALFDA020000003.1 Protein Homology CDS 149639 150643 . - 0 ID=cds-HJH9170747.1;Parent=gene-O5C65_000574;Dbxref=NCBI_GP:HJH9170747.1;Name=HJH9170747.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459123.1;locus_tag=O5C65_000574;product=catabolite repressor/activator;protein_id=HJH9170747.1;transl_table=11 DALFDA020000003.1 tpg gene 150927 151418 . - . ID=gene-O5C65_000575;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=O5C65_000575 DALFDA020000003.1 Protein Homology CDS 150927 151418 . - 0 ID=cds-HJH9170748.1;Parent=gene-O5C65_000575;Dbxref=NCBI_GP:HJH9170748.1;Name=HJH9170748.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=O5C65_000575;product=acetolactate synthase small subunit;protein_id=HJH9170748.1;transl_table=11 DALFDA020000003.1 tpg gene 151421 153145 . - . ID=gene-O5C65_000576;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=O5C65_000576 DALFDA020000003.1 Protein Homology CDS 151421 153145 . - 0 ID=cds-HJH9170749.1;Parent=gene-O5C65_000576;Dbxref=NCBI_GP:HJH9170749.1;Name=HJH9170749.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=O5C65_000576;product=acetolactate synthase 3 large subunit;protein_id=HJH9170749.1;transl_table=11 DALFDA020000003.1 tpg gene 153467 154411 . - . ID=gene-O5C65_000577;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=O5C65_000577 DALFDA020000003.1 Protein Homology CDS 153467 154411 . - 0 ID=cds-HJH9170750.1;Parent=gene-O5C65_000577;Dbxref=NCBI_GP:HJH9170750.1;Name=HJH9170750.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459120.1;locus_tag=O5C65_000577;product=transcriptional regulator LeuO;protein_id=HJH9170750.1;transl_table=11 DALFDA020000003.1 tpg gene 155068 155154 . + . ID=gene-O5C65_000578;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=O5C65_000578 DALFDA020000003.1 Protein Homology CDS 155068 155154 . + 0 ID=cds-HJH9170751.1;Parent=gene-O5C65_000578;Dbxref=NCBI_GP:HJH9170751.1;Name=HJH9170751.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459119.1;locus_tag=O5C65_000578;product=leu operon leader peptide;protein_id=HJH9170751.1;transl_table=11 DALFDA020000003.1 tpg gene 155242 156813 . + . ID=gene-O5C65_000579;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=O5C65_000579 DALFDA020000003.1 Protein Homology CDS 155242 156813 . + 0 ID=cds-HJH9170752.1;Parent=gene-O5C65_000579;Dbxref=NCBI_GP:HJH9170752.1;Name=HJH9170752.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=O5C65_000579;product=2-isopropylmalate synthase;protein_id=HJH9170752.1;transl_table=11 DALFDA020000003.1 tpg gene 156813 157904 . + . ID=gene-O5C65_000580;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=O5C65_000580 DALFDA020000003.1 Protein Homology CDS 156813 157904 . + 0 ID=cds-HJH9170753.1;Parent=gene-O5C65_000580;Dbxref=NCBI_GP:HJH9170753.1;Name=HJH9170753.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=O5C65_000580;product=3-isopropylmalate dehydrogenase;protein_id=HJH9170753.1;transl_table=11 DALFDA020000003.1 tpg gene 157907 159307 . + . ID=gene-O5C65_000581;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=O5C65_000581 DALFDA020000003.1 Protein Homology CDS 157907 159307 . + 0 ID=cds-HJH9170754.1;Parent=gene-O5C65_000581;Dbxref=NCBI_GP:HJH9170754.1;Name=HJH9170754.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459116.1;locus_tag=O5C65_000581;product=3-isopropylmalate dehydratase large subunit;protein_id=HJH9170754.1;transl_table=11 DALFDA020000003.1 tpg gene 159318 159923 . + . ID=gene-O5C65_000582;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=O5C65_000582 DALFDA020000003.1 Protein Homology CDS 159318 159923 . + 0 ID=cds-HJH9170755.1;Parent=gene-O5C65_000582;Dbxref=NCBI_GP:HJH9170755.1;Name=HJH9170755.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459115.1;locus_tag=O5C65_000582;product=3-isopropylmalate dehydratase small subunit;protein_id=HJH9170755.1;transl_table=11 DALFDA020000003.1 tpg gene 160259 160381 . - . ID=gene-O5C65_000583;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=O5C65_000583 DALFDA020000003.1 Protein Homology CDS 160259 160381 . - 0 ID=cds-HJH9170756.1;Parent=gene-O5C65_000583;Dbxref=NCBI_GP:HJH9170756.1;Name=HJH9170756.1;Ontology_term=GO:0046325;gbkey=CDS;gene=sgrT;go_process=negative regulation of D-glucose import|0046325||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248755.1;locus_tag=O5C65_000583;product=glucose uptake inhibitor SgrT;protein_id=HJH9170756.1;transl_table=11 DALFDA020000003.1 tpg gene 160474 162132 . + . ID=gene-O5C65_000584;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=O5C65_000584 DALFDA020000003.1 Protein Homology CDS 160474 162132 . + 0 ID=cds-HJH9170757.1;Parent=gene-O5C65_000584;Dbxref=NCBI_GP:HJH9170757.1;Name=HJH9170757.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459114.1;locus_tag=O5C65_000584;product=HTH-type transcriptional regulator SgrR;protein_id=HJH9170757.1;transl_table=11 DALFDA020000003.1 cmsearch riboswitch 162179 162278 . + . ID=id-DALFDA020000003.1:162179..162278;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch DALFDA020000003.1 tpg gene 162310 163293 . + . ID=gene-O5C65_000585;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=O5C65_000585 DALFDA020000003.1 Protein Homology CDS 162310 163293 . + 0 ID=cds-HJH9170758.1;Parent=gene-O5C65_000585;Dbxref=NCBI_GP:HJH9170758.1;Name=HJH9170758.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459113.1;locus_tag=O5C65_000585;product=thiamine ABC transporter substrate binding subunit;protein_id=HJH9170758.1;transl_table=11 DALFDA020000003.1 tpg gene 163269 164879 . + . ID=gene-O5C65_000586;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=O5C65_000586 DALFDA020000003.1 Protein Homology CDS 163269 164879 . + 0 ID=cds-HJH9170759.1;Parent=gene-O5C65_000586;Dbxref=NCBI_GP:HJH9170759.1;Name=HJH9170759.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459112.1;locus_tag=O5C65_000586;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=HJH9170759.1;transl_table=11 DALFDA020000003.1 tpg gene 164863 165570 . + . ID=gene-O5C65_000587;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=O5C65_000587 DALFDA020000003.1 Protein Homology CDS 164863 165570 . + 0 ID=cds-HJH9170760.1;Parent=gene-O5C65_000587;Dbxref=NCBI_GP:HJH9170760.1;Name=HJH9170760.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459111.1;locus_tag=O5C65_000587;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=HJH9170760.1;transl_table=11 DALFDA020000003.1 tpg gene 165609 166376 . - . ID=gene-O5C65_000588;Name=O5C65_000588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000588 DALFDA020000003.1 Protein Homology CDS 165609 166376 . - 0 ID=cds-HJH9170761.1;Parent=gene-O5C65_000588;Dbxref=NCBI_GP:HJH9170761.1;Name=HJH9170761.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459110.1;locus_tag=O5C65_000588;product=DedA family protein;protein_id=HJH9170761.1;transl_table=11 DALFDA020000003.1 tpg gene 166495 167340 . - . ID=gene-O5C65_000589;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=O5C65_000589 DALFDA020000003.1 Protein Homology CDS 166495 167340 . - 0 ID=cds-HJH9170762.1;Parent=gene-O5C65_000589;Dbxref=NCBI_GP:HJH9170762.1;Name=HJH9170762.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459109.1;locus_tag=O5C65_000589;product=arabinose operon transcriptional regulator AraC;protein_id=HJH9170762.1;transl_table=11 DALFDA020000003.1 tpg gene 167681 169390 . + . ID=gene-O5C65_000590;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=O5C65_000590 DALFDA020000003.1 Protein Homology CDS 167681 169390 . + 0 ID=cds-HJH9170763.1;Parent=gene-O5C65_000590;Dbxref=NCBI_GP:HJH9170763.1;Name=HJH9170763.1;Ontology_term=GO:0019568,GO:0005524,GO:0008741;gbkey=CDS;gene=araB;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459108.1;locus_tag=O5C65_000590;product=ribulokinase;protein_id=HJH9170763.1;transl_table=11 DALFDA020000003.1 tpg gene 169401 170903 . + . ID=gene-O5C65_000591;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=O5C65_000591 DALFDA020000003.1 Protein Homology CDS 169401 170903 . + 0 ID=cds-HJH9170764.1;Parent=gene-O5C65_000591;Dbxref=NCBI_GP:HJH9170764.1;Name=HJH9170764.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459107.1;locus_tag=O5C65_000591;product=L-arabinose isomerase;protein_id=HJH9170764.1;transl_table=11 DALFDA020000003.1 tpg gene 171044 171739 . + . ID=gene-O5C65_000592;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=O5C65_000592 DALFDA020000003.1 Protein Homology CDS 171044 171739 . + 0 ID=cds-HJH9170765.1;Parent=gene-O5C65_000592;Dbxref=NCBI_GP:HJH9170765.1;Name=HJH9170765.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459106.1;locus_tag=O5C65_000592;product=L-ribulose-5-phosphate 4-epimerase;protein_id=HJH9170765.1;transl_table=11 DALFDA020000003.1 tpg gene 171745 172164 . - . ID=gene-O5C65_000593;Name=O5C65_000593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000593 DALFDA020000003.1 Protein Homology CDS 171745 172164 . - 0 ID=cds-HJH9170766.1;Parent=gene-O5C65_000593;Dbxref=NCBI_GP:HJH9170766.1;Name=HJH9170766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459105.1;locus_tag=O5C65_000593;product=DUF4751 family protein;protein_id=HJH9170766.1;transl_table=11 DALFDA020000003.1 tpg pseudogene 172682 173080 . + . ID=gene-O5C65_000594;Name=O5C65_000594;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_000594;pseudo=true DALFDA020000003.1 Protein Homology CDS 172682 173080 . + 0 ID=cds-O5C65_000594;Parent=gene-O5C65_000594;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=O5C65_000594;product=YdcF family protein;pseudo=true;transl_table=11 DALFDA020000003.1 tpg gene 173156 174361 . - . ID=gene-O5C65_000595;Name=O5C65_000595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000595 DALFDA020000003.1 Protein Homology CDS 173156 174361 . - 0 ID=cds-HJH9170767.1;Parent=gene-O5C65_000595;Dbxref=NCBI_GP:HJH9170767.1;Name=HJH9170767.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669153.1;locus_tag=O5C65_000595;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=HJH9170767.1;transl_table=11 DALFDA020000003.1 tpg gene 174420 174824 . + . ID=gene-O5C65_000596;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=O5C65_000596 DALFDA020000003.1 Protein Homology CDS 174420 174824 . + 0 ID=cds-HJH9170768.1;Parent=gene-O5C65_000596;Dbxref=NCBI_GP:HJH9170768.1;Name=HJH9170768.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_021141233.1;locus_tag=O5C65_000596;product=IS200/IS605 family transposase;protein_id=HJH9170768.1;transl_table=11 DALFDA020000003.1 tpg pseudogene 174899 175120 . + . ID=gene-O5C65_000597;Name=O5C65_000597;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_000597;pseudo=true DALFDA020000003.1 Protein Homology CDS 174899 175120 . + 0 ID=cds-O5C65_000597;Parent=gene-O5C65_000597;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=O5C65_000597;product=YdcF family protein;pseudo=true;transl_table=11 DALFDA020000003.1 tpg gene 175164 177515 . + . ID=gene-O5C65_000598;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=O5C65_000598 DALFDA020000003.1 Protein Homology CDS 175164 177515 . + 0 ID=cds-HJH9170769.1;Parent=gene-O5C65_000598;Dbxref=NCBI_GP:HJH9170769.1;Name=HJH9170769.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459102.1;locus_tag=O5C65_000598;product=DNA polymerase II;protein_id=HJH9170769.1;transl_table=11 DALFDA020000003.1 tpg gene 177689 180595 . + . ID=gene-O5C65_000599;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=O5C65_000599 DALFDA020000003.1 Protein Homology CDS 177689 180595 . + 0 ID=cds-HJH9170770.1;Parent=gene-O5C65_000599;Dbxref=NCBI_GP:HJH9170770.1;Name=HJH9170770.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=O5C65_000599;product=RNA polymerase-associated protein RapA;protein_id=HJH9170770.1;transl_table=11 DALFDA020000003.1 tpg gene 180607 181266 . + . ID=gene-O5C65_000600;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=O5C65_000600 DALFDA020000003.1 Protein Homology CDS 180607 181266 . + 0 ID=cds-HJH9170771.1;Parent=gene-O5C65_000600;Dbxref=NCBI_GP:HJH9170771.1;Name=HJH9170771.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459100.1;locus_tag=O5C65_000600;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=HJH9170771.1;transl_table=11 DALFDA020000003.1 tpg gene 181361 182173 . - . ID=gene-O5C65_000601;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=O5C65_000601 DALFDA020000003.1 Protein Homology CDS 181361 182173 . - 0 ID=cds-HJH9170772.1;Parent=gene-O5C65_000601;Dbxref=NCBI_GP:HJH9170772.1;Name=HJH9170772.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459099.1;locus_tag=O5C65_000601;product=co-chaperone DjlA;protein_id=HJH9170772.1;transl_table=11 DALFDA020000003.1 tpg gene 182427 184787 . + . ID=gene-O5C65_000602;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=O5C65_000602 DALFDA020000003.1 Protein Homology CDS 182427 184787 . + 0 ID=cds-HJH9170773.1;Parent=gene-O5C65_000602;Dbxref=NCBI_GP:HJH9170773.1;Name=HJH9170773.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459098.1;locus_tag=O5C65_000602;product=LPS assembly protein LptD;protein_id=HJH9170773.1;transl_table=11 DALFDA020000003.1 tpg gene 184841 186127 . + . ID=gene-O5C65_000603;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=O5C65_000603 DALFDA020000003.1 Protein Homology CDS 184841 186127 . + 0 ID=cds-HJH9170774.1;Parent=gene-O5C65_000603;Dbxref=NCBI_GP:HJH9170774.1;Name=HJH9170774.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459097.1;locus_tag=O5C65_000603;product=peptidylprolyl isomerase SurA;protein_id=HJH9170774.1;transl_table=11 DALFDA020000003.1 tpg gene 186127 187116 . + . ID=gene-O5C65_000604;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=O5C65_000604 DALFDA020000003.1 Protein Homology CDS 186127 187116 . + 0 ID=cds-HJH9170775.1;Parent=gene-O5C65_000604;Dbxref=NCBI_GP:HJH9170775.1;Name=HJH9170775.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459096.1;locus_tag=O5C65_000604;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=HJH9170775.1;transl_table=11 DALFDA020000003.1 tpg gene 187113 187934 . + . ID=gene-O5C65_000605;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=O5C65_000605 DALFDA020000003.1 Protein Homology CDS 187113 187934 . + 0 ID=cds-HJH9170776.1;Parent=gene-O5C65_000605;Dbxref=NCBI_GP:HJH9170776.1;Name=HJH9170776.1;Ontology_term=GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459095.1;locus_tag=O5C65_000605;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=HJH9170776.1;transl_table=11 DALFDA020000003.1 tpg gene 187937 188314 . + . ID=gene-O5C65_000606;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=O5C65_000606 DALFDA020000003.1 Protein Homology CDS 187937 188314 . + 0 ID=cds-HJH9170777.1;Parent=gene-O5C65_000606;Dbxref=NCBI_GP:HJH9170777.1;Name=HJH9170777.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459094.1;locus_tag=O5C65_000606;product=Co2+/Mg2+ efflux protein ApaG;protein_id=HJH9170777.1;transl_table=11 DALFDA020000003.1 tpg gene 188325 189173 . + . ID=gene-O5C65_000607;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=O5C65_000607 DALFDA020000003.1 Protein Homology CDS 188325 189173 . + 0 ID=cds-HJH9170778.1;Parent=gene-O5C65_000607;Dbxref=NCBI_GP:HJH9170778.1;Name=HJH9170778.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459093.1;locus_tag=O5C65_000607;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=HJH9170778.1;transl_table=11 DALFDA020000003.1 tpg gene 189279 189758 . - . ID=gene-O5C65_000608;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=O5C65_000608 DALFDA020000003.1 Protein Homology CDS 189279 189758 . - 0 ID=cds-HJH9170779.1;Parent=gene-O5C65_000608;Dbxref=NCBI_GP:HJH9170779.1;Name=HJH9170779.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=O5C65_000608;product=type 3 dihydrofolate reductase;protein_id=HJH9170779.1;transl_table=11 DALFDA020000003.1 tpg gene 189957 191819 . - . ID=gene-O5C65_000609;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=O5C65_000609 DALFDA020000003.1 Protein Homology CDS 189957 191819 . - 0 ID=cds-HJH9170780.1;Parent=gene-O5C65_000609;Dbxref=NCBI_GP:HJH9170780.1;Name=HJH9170780.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459091.1;locus_tag=O5C65_000609;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=HJH9170780.1;transl_table=11 DALFDA020000003.1 tpg gene 191812 192342 . - . ID=gene-O5C65_000610;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=O5C65_000610 DALFDA020000003.1 Protein Homology CDS 191812 192342 . - 0 ID=cds-HJH9170781.1;Parent=gene-O5C65_000610;Dbxref=NCBI_GP:HJH9170781.1;Name=HJH9170781.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459090.1;locus_tag=O5C65_000610;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=HJH9170781.1;transl_table=11 DALFDA020000003.1 tpg pseudogene 192464 192544 . + . ID=gene-O5C65_000611;Name=O5C65_000611;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_000611;pseudo=true DALFDA020000003.1 Protein Homology CDS 192464 192544 . + 0 ID=cds-O5C65_000611;Parent=gene-O5C65_000611;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=O5C65_000611;product=hypothetical protein;pseudo=true;transl_table=11 DALFDA020000003.1 tpg gene 192896 194785 . - . ID=gene-O5C65_000612;Name=O5C65_000612;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000612 DALFDA020000003.1 Protein Homology CDS 192896 194785 . - 0 ID=cds-HJH9170782.1;Parent=gene-O5C65_000612;Dbxref=NCBI_GP:HJH9170782.1;Name=HJH9170782.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459089.1;locus_tag=O5C65_000612;product=sulfatase-like hydrolase/transferase;protein_id=HJH9170782.1;transl_table=11 DALFDA020000003.1 tpg gene 195683 195973 . + . ID=gene-O5C65_000613;Name=srfN;gbkey=Gene;gene=srfN;gene_biotype=protein_coding;locus_tag=O5C65_000613 DALFDA020000003.1 Protein Homology CDS 195683 195973 . + 0 ID=cds-HJH9170783.1;Parent=gene-O5C65_000613;Dbxref=NCBI_GP:HJH9170783.1;Name=HJH9170783.1;gbkey=CDS;gene=srfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459087.1;locus_tag=O5C65_000613;product=DUF1471 family virulence protein SrfN;protein_id=HJH9170783.1;transl_table=11 DALFDA020000003.1 tpg gene 196197 196613 . - . ID=gene-O5C65_000614;Name=O5C65_000614;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000614 DALFDA020000003.1 Protein Homology CDS 196197 196613 . - 0 ID=cds-HJH9170784.1;Parent=gene-O5C65_000614;Dbxref=NCBI_GP:HJH9170784.1;Name=HJH9170784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459086.1;locus_tag=O5C65_000614;product=hypothetical protein;protein_id=HJH9170784.1;transl_table=11 DALFDA020000003.1 tpg pseudogene 196779 196873 . - . ID=gene-O5C65_000615;Name=O5C65_000615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_000615;pseudo=true DALFDA020000003.1 Protein Homology CDS 196779 196873 . - 0 ID=cds-O5C65_000615;Parent=gene-O5C65_000615;Note=Required for full activity of KefC%2C a potassium-proton antiporter%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459090.1;locus_tag=O5C65_000615;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;pseudo=true;transl_table=11 DALFDA020000003.1 tpg gene 196900 197130 . - . ID=gene-O5C65_000616;Name=O5C65_000616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000616 DALFDA020000003.1 Protein Homology CDS 196900 197130 . - 0 ID=cds-HJH9170785.1;Parent=gene-O5C65_000616;Dbxref=NCBI_GP:HJH9170785.1;Name=HJH9170785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459085.1;locus_tag=O5C65_000616;product=YgdI/YgdR family lipoprotein;protein_id=HJH9170785.1;transl_table=11 DALFDA020000003.1 tpg gene 197219 198559 . - . ID=gene-O5C65_000617;Name=O5C65_000617;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000617 DALFDA020000003.1 Protein Homology CDS 197219 198559 . - 0 ID=cds-HJH9170786.1;Parent=gene-O5C65_000617;Dbxref=NCBI_GP:HJH9170786.1;Name=HJH9170786.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459084.1;locus_tag=O5C65_000617;product=MFS transporter;protein_id=HJH9170786.1;transl_table=11 DALFDA020000003.1 tpg gene 198706 198993 . - . ID=gene-O5C65_000618;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=O5C65_000618 DALFDA020000003.1 Protein Homology CDS 198706 198993 . - 0 ID=cds-HJH9170787.1;Parent=gene-O5C65_000618;Dbxref=NCBI_GP:HJH9170787.1;Name=HJH9170787.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459083.1;locus_tag=O5C65_000618;product=ferredoxin-like protein FixX;protein_id=HJH9170787.1;transl_table=11 DALFDA020000003.1 tpg gene 198990 200276 . - . ID=gene-O5C65_000619;Name=O5C65_000619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000619 DALFDA020000003.1 Protein Homology CDS 198990 200276 . - 0 ID=cds-HJH9170788.1;Parent=gene-O5C65_000619;Dbxref=NCBI_GP:HJH9170788.1;Name=HJH9170788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459082.1;locus_tag=O5C65_000619;product=FAD-dependent oxidoreductase;protein_id=HJH9170788.1;transl_table=11 DALFDA020000003.1 tpg gene 200326 201267 . - . ID=gene-O5C65_000620;Name=O5C65_000620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000620 DALFDA020000003.1 Protein Homology CDS 200326 201267 . - 0 ID=cds-HJH9170789.1;Parent=gene-O5C65_000620;Dbxref=NCBI_GP:HJH9170789.1;Name=HJH9170789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459081.1;locus_tag=O5C65_000620;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=HJH9170789.1;transl_table=11 DALFDA020000003.1 tpg gene 201283 202053 . - . ID=gene-O5C65_000621;Name=O5C65_000621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000621 DALFDA020000003.1 Protein Homology CDS 201283 202053 . - 0 ID=cds-HJH9170790.1;Parent=gene-O5C65_000621;Dbxref=NCBI_GP:HJH9170790.1;Name=HJH9170790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459080.1;locus_tag=O5C65_000621;product=electron transfer flavoprotein FixA;protein_id=HJH9170790.1;transl_table=11 DALFDA020000003.1 tpg gene 202534 204051 . + . ID=gene-O5C65_000622;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=O5C65_000622 DALFDA020000003.1 Protein Homology CDS 202534 204051 . + 0 ID=cds-HJH9170791.1;Parent=gene-O5C65_000622;Dbxref=NCBI_GP:HJH9170791.1;Name=HJH9170791.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459079.1;locus_tag=O5C65_000622;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=HJH9170791.1;transl_table=11 DALFDA020000003.1 tpg gene 204086 205228 . + . ID=gene-O5C65_000623;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=O5C65_000623 DALFDA020000003.1 Protein Homology CDS 204086 205228 . + 0 ID=cds-HJH9170792.1;Parent=gene-O5C65_000623;Dbxref=NCBI_GP:HJH9170792.1;Name=HJH9170792.1;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=O5C65_000623;product=crotonobetainyl-CoA dehydrogenase;protein_id=HJH9170792.1;transl_table=11 DALFDA020000003.1 tpg gene 205340 206557 . + . ID=gene-O5C65_000624;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=O5C65_000624 DALFDA020000003.1 Protein Homology CDS 205340 206557 . + 0 ID=cds-HJH9170793.1;Parent=gene-O5C65_000624;Dbxref=NCBI_GP:HJH9170793.1;Name=HJH9170793.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459077.1;locus_tag=O5C65_000624;product=L-carnitine CoA-transferase;protein_id=HJH9170793.1;transl_table=11 DALFDA020000003.1 tpg gene 206620 208173 . + . ID=gene-O5C65_000625;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=O5C65_000625 DALFDA020000003.1 Protein Homology CDS 206620 208173 . + 0 ID=cds-HJH9170794.1;Parent=gene-O5C65_000625;Dbxref=NCBI_GP:HJH9170794.1;Name=HJH9170794.1;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459076.1;locus_tag=O5C65_000625;product=crotonobetaine/carnitine-CoA ligase;protein_id=HJH9170794.1;transl_table=11 DALFDA020000003.1 tpg gene 208227 209012 . + . ID=gene-O5C65_000626;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=O5C65_000626 DALFDA020000003.1 Protein Homology CDS 208227 209012 . + 0 ID=cds-HJH9170795.1;Parent=gene-O5C65_000626;Dbxref=NCBI_GP:HJH9170795.1;Name=HJH9170795.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=O5C65_000626;product=crotonobetainyl-CoA hydratase;protein_id=HJH9170795.1;transl_table=11 DALFDA020000003.1 tpg gene 209121 209717 . + . ID=gene-O5C65_000627;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=O5C65_000627 DALFDA020000003.1 Protein Homology CDS 209121 209717 . + 0 ID=cds-HJH9170796.1;Parent=gene-O5C65_000627;Dbxref=NCBI_GP:HJH9170796.1;Name=HJH9170796.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459074.1;locus_tag=O5C65_000627;product=carnitine operon protein CaiE;protein_id=HJH9170796.1;transl_table=11 DALFDA020000003.1 tpg gene 209795 210190 . - . ID=gene-O5C65_000628;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=O5C65_000628 DALFDA020000003.1 Protein Homology CDS 209795 210190 . - 0 ID=cds-HJH9170797.1;Parent=gene-O5C65_000628;Dbxref=NCBI_GP:HJH9170797.1;Name=HJH9170797.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459073.1;locus_tag=O5C65_000628;product=carnitine metabolism transcriptional regulator CaiF;protein_id=HJH9170797.1;transl_table=11 DALFDA020000003.1 tpg gene 210464 213691 . - . ID=gene-O5C65_000629;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=O5C65_000629 DALFDA020000003.1 Protein Homology CDS 210464 213691 . - 0 ID=cds-HJH9170798.1;Parent=gene-O5C65_000629;Dbxref=NCBI_GP:HJH9170798.1;Name=HJH9170798.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459072.1;locus_tag=O5C65_000629;product=carbamoyl-phosphate synthase large subunit;protein_id=HJH9170798.1;transl_table=11 DALFDA020000003.1 tpg gene 213710 214858 . - . ID=gene-O5C65_000630;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=O5C65_000630 DALFDA020000003.1 Protein Homology CDS 213710 214858 . - 0 ID=cds-HJH9170799.1;Parent=gene-O5C65_000630;Dbxref=NCBI_GP:HJH9170799.1;Name=HJH9170799.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459071.1;locus_tag=O5C65_000630;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=HJH9170799.1;transl_table=11 DALFDA020000003.1 tpg gene 215496 215771 . + . ID=gene-O5C65_000631;Name=O5C65_000631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000631 DALFDA020000003.1 GeneMarkS-2+ CDS 215496 215771 . + 0 ID=cds-HJH9170800.1;Parent=gene-O5C65_000631;Dbxref=NCBI_GP:HJH9170800.1;Name=HJH9170800.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_000631;product=hypothetical protein;protein_id=HJH9170800.1;transl_table=11 ##sequence-region DALFDA020000004.1 1 206955 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000004.1 tpg region 1 206955 . + . ID=DALFDA020000004.1:1..206955;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000004.1 tpg gene 352 2706 . + . ID=gene-O5C65_000632;Name=O5C65_000632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000632 DALFDA020000004.1 Protein Homology CDS 352 2706 . + 0 ID=cds-HJH9170801.1;Parent=gene-O5C65_000632;Dbxref=NCBI_GP:HJH9170801.1;Name=HJH9170801.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF014567.6;locus_tag=O5C65_000632;product=ATP-binding protein;protein_id=HJH9170801.1;transl_table=11 DALFDA020000004.1 tpg gene 2708 4567 . + . ID=gene-O5C65_000633;Name=O5C65_000633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000633 DALFDA020000004.1 GeneMarkS-2+ CDS 2708 4567 . + 0 ID=cds-HJH9170802.1;Parent=gene-O5C65_000633;Dbxref=NCBI_GP:HJH9170802.1;Name=HJH9170802.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_000633;product=hypothetical protein;protein_id=HJH9170802.1;transl_table=11 DALFDA020000004.1 tpg gene 4604 5446 . - . ID=gene-O5C65_000634;Name=O5C65_000634;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000634 DALFDA020000004.1 Protein Homology CDS 4604 5446 . - 0 ID=cds-HJH9170803.1;Parent=gene-O5C65_000634;Dbxref=NCBI_GP:HJH9170803.1;Name=HJH9170803.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094409.1;locus_tag=O5C65_000634;product=phosphoadenosine phosphosulfate reductase family protein;protein_id=HJH9170803.1;transl_table=11 DALFDA020000004.1 tpg gene 5447 8770 . - . ID=gene-O5C65_000635;Name=O5C65_000635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000635 DALFDA020000004.1 Protein Homology CDS 5447 8770 . - 0 ID=cds-HJH9170804.1;Parent=gene-O5C65_000635;Dbxref=NCBI_GP:HJH9170804.1;Name=HJH9170804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010277939.1;locus_tag=O5C65_000635;product=ATP-binding protein;protein_id=HJH9170804.1;transl_table=11 DALFDA020000004.1 tpg gene 8760 9698 . - . ID=gene-O5C65_000636;Name=O5C65_000636;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000636 DALFDA020000004.1 Protein Homology CDS 8760 9698 . - 0 ID=cds-HJH9170805.1;Parent=gene-O5C65_000636;Dbxref=NCBI_GP:HJH9170805.1;Name=HJH9170805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000929962.1;locus_tag=O5C65_000636;product=DUF4007 family protein;protein_id=HJH9170805.1;transl_table=11 DALFDA020000004.1 tpg gene 10113 10406 . + . ID=gene-O5C65_000637;Name=O5C65_000637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000637 DALFDA020000004.1 Protein Homology CDS 10113 10406 . + 0 ID=cds-HJH9170806.1;Parent=gene-O5C65_000637;Dbxref=NCBI_GP:HJH9170806.1;Name=HJH9170806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001143292.1;locus_tag=O5C65_000637;product=hypothetical protein;protein_id=HJH9170806.1;transl_table=11 DALFDA020000004.1 tpg gene 10491 11402 . + . ID=gene-O5C65_000638;Name=O5C65_000638;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000638 DALFDA020000004.1 Protein Homology CDS 10491 11402 . + 0 ID=cds-HJH9170807.1;Parent=gene-O5C65_000638;Dbxref=NCBI_GP:HJH9170807.1;Name=HJH9170807.1;Ontology_term=GO:0003697,GO:0008237,GO:0008270;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748766.1;locus_tag=O5C65_000638;product=ArdC family protein;protein_id=HJH9170807.1;transl_table=11 DALFDA020000004.1 tpg gene 11508 11963 . + . ID=gene-O5C65_000639;Name=O5C65_000639;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000639 DALFDA020000004.1 Protein Homology CDS 11508 11963 . + 0 ID=cds-HJH9170808.1;Parent=gene-O5C65_000639;Dbxref=NCBI_GP:HJH9170808.1;Name=HJH9170808.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001805394.1;locus_tag=O5C65_000639;product=NUDIX hydrolase;protein_id=HJH9170808.1;transl_table=11 DALFDA020000004.1 tpg gene 12131 13750 . + . ID=gene-O5C65_000640;Name=mobH;gbkey=Gene;gene=mobH;gene_biotype=protein_coding;locus_tag=O5C65_000640 DALFDA020000004.1 Protein Homology CDS 12131 13750 . + 0 ID=cds-HJH9170809.1;Parent=gene-O5C65_000640;Dbxref=NCBI_GP:HJH9170809.1;Name=HJH9170809.1;gbkey=CDS;gene=mobH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003830239.1;locus_tag=O5C65_000640;product=MobH family relaxase;protein_id=HJH9170809.1;transl_table=11 DALFDA020000004.1 tpg gene 13740 14666 . + . ID=gene-O5C65_000641;Name=O5C65_000641;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000641 DALFDA020000004.1 Protein Homology CDS 13740 14666 . + 0 ID=cds-HJH9170810.1;Parent=gene-O5C65_000641;Dbxref=NCBI_GP:HJH9170810.1;Name=HJH9170810.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000142418.1;locus_tag=O5C65_000641;product=tyrosine-type recombinase/integrase;protein_id=HJH9170810.1;transl_table=11 DALFDA020000004.1 tpg gene 14816 14900 . - . ID=gene-O5C65_000642;Name=O5C65_000642;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_000642 DALFDA020000004.1 tRNAscan-SE tRNA 14816 14900 . - . ID=rna-O5C65_000642;Parent=gene-O5C65_000642;anticodon=(pos:complement(14864..14866));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_000642;product=tRNA-Leu DALFDA020000004.1 tRNAscan-SE exon 14816 14900 . - . ID=exon-O5C65_000642-1;Parent=rna-O5C65_000642;anticodon=(pos:complement(14864..14866));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_000642;product=tRNA-Leu DALFDA020000004.1 tpg gene 15123 16142 . + . ID=gene-O5C65_000643;Name=ahr;gbkey=Gene;gene=ahr;gene_biotype=protein_coding;locus_tag=O5C65_000643 DALFDA020000004.1 Protein Homology CDS 15123 16142 . + 0 ID=cds-HJH9170811.1;Parent=gene-O5C65_000643;Dbxref=NCBI_GP:HJH9170811.1;Name=HJH9170811.1;Ontology_term=GO:0006631,GO:0008106,GO:0016616;gbkey=CDS;gene=ahr;go_function=alcohol dehydrogenase (NADP+) activity|0008106||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463346.1;locus_tag=O5C65_000643;product=NADPH-dependent aldehyde reductase Ahr;protein_id=HJH9170811.1;transl_table=11 DALFDA020000004.1 tpg gene 16170 16700 . - . ID=gene-O5C65_000644;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=O5C65_000644 DALFDA020000004.1 Protein Homology CDS 16170 16700 . - 0 ID=cds-HJH9170812.1;Parent=gene-O5C65_000644;Dbxref=NCBI_GP:HJH9170812.1;Name=HJH9170812.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463345.1;locus_tag=O5C65_000644;product=gluconokinase;protein_id=HJH9170812.1;transl_table=11 DALFDA020000004.1 tpg gene 16917 17948 . + . ID=gene-O5C65_000645;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=O5C65_000645 DALFDA020000004.1 Protein Homology CDS 16917 17948 . + 0 ID=cds-HJH9170813.1;Parent=gene-O5C65_000645;Dbxref=NCBI_GP:HJH9170813.1;Name=HJH9170813.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463344.1;locus_tag=O5C65_000645;product=L-idonate 5-dehydrogenase;protein_id=HJH9170813.1;transl_table=11 DALFDA020000004.1 tpg gene 17973 18737 . + . ID=gene-O5C65_000646;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=O5C65_000646 DALFDA020000004.1 Protein Homology CDS 17973 18737 . + 0 ID=cds-HJH9170814.1;Parent=gene-O5C65_000646;Dbxref=NCBI_GP:HJH9170814.1;Name=HJH9170814.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463343.1;locus_tag=O5C65_000646;product=gluconate 5-dehydrogenase;protein_id=HJH9170814.1;transl_table=11 DALFDA020000004.1 tpg gene 18799 20118 . + . ID=gene-O5C65_000647;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=protein_coding;locus_tag=O5C65_000647 DALFDA020000004.1 Protein Homology CDS 18799 20118 . + 0 ID=cds-HJH9170815.1;Parent=gene-O5C65_000647;Dbxref=NCBI_GP:HJH9170815.1;Name=HJH9170815.1;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463342.1;locus_tag=O5C65_000647;product=gnt-II system L-idonate transporter;protein_id=HJH9170815.1;transl_table=11 DALFDA020000004.1 tpg gene 20182 21180 . + . ID=gene-O5C65_000648;Name=idnR;gbkey=Gene;gene=idnR;gene_biotype=protein_coding;gene_synonym=gntH,yjgS;locus_tag=O5C65_000648 DALFDA020000004.1 Protein Homology CDS 20182 21180 . + 0 ID=cds-HJH9170816.1;Parent=gene-O5C65_000648;Dbxref=NCBI_GP:HJH9170816.1;Name=HJH9170816.1;Ontology_term=GO:0006355,GO:0019521,GO:0003700;gbkey=CDS;gene=idnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,D-gluconate metabolic process|0019521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463341.1;locus_tag=O5C65_000648;product=DNA-binding transcriptional regulator IdnR;protein_id=HJH9170816.1;transl_table=11 DALFDA020000004.1 tpg gene 21376 22458 . - . ID=gene-O5C65_000649;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=O5C65_000649 DALFDA020000004.1 Protein Homology CDS 21376 22458 . - 0 ID=cds-HJH9170817.1;Parent=gene-O5C65_000649;Dbxref=NCBI_GP:HJH9170817.1;Name=HJH9170817.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463340.1;locus_tag=O5C65_000649;product=LPS export ABC transporter permease LptG;protein_id=HJH9170817.1;transl_table=11 DALFDA020000004.1 tpg gene 22458 23558 . - . ID=gene-O5C65_000650;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=O5C65_000650 DALFDA020000004.1 Protein Homology CDS 22458 23558 . - 0 ID=cds-HJH9170818.1;Parent=gene-O5C65_000650;Dbxref=NCBI_GP:HJH9170818.1;Name=HJH9170818.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463339.1;locus_tag=O5C65_000650;product=LPS export ABC transporter permease LptF;protein_id=HJH9170818.1;transl_table=11 DALFDA020000004.1 tpg gene 23622 23672 . - . ID=gene-O5C65_000651;Name=O5C65_000651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000651 DALFDA020000004.1 Protein Homology CDS 23622 23672 . - 0 ID=cds-HJH9170819.1;Parent=gene-O5C65_000651;Dbxref=NCBI_GP:HJH9170819.1;Name=HJH9170819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=O5C65_000651;product=hypothetical protein;protein_id=HJH9170819.1;transl_table=11 DALFDA020000004.1 tpg gene 23953 25464 . + . ID=gene-O5C65_000652;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=O5C65_000652 DALFDA020000004.1 Protein Homology CDS 23953 25464 . + 0 ID=cds-HJH9170820.1;Parent=gene-O5C65_000652;Dbxref=NCBI_GP:HJH9170820.1;Name=HJH9170820.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463337.1;locus_tag=O5C65_000652;product=leucyl aminopeptidase;protein_id=HJH9170820.1;transl_table=11 DALFDA020000004.1 tpg gene 25601 26044 . + . ID=gene-O5C65_000653;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=O5C65_000653 DALFDA020000004.1 Protein Homology CDS 25601 26044 . + 0 ID=cds-HJH9170821.1;Parent=gene-O5C65_000653;Dbxref=NCBI_GP:HJH9170821.1;Name=HJH9170821.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=O5C65_000653;product=DNA polymerase III subunit chi;protein_id=HJH9170821.1;transl_table=11 DALFDA020000004.1 tpg gene 26044 28899 . + . ID=gene-O5C65_000654;Name=O5C65_000654;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000654 DALFDA020000004.1 Protein Homology CDS 26044 28899 . + 0 ID=cds-HJH9170822.1;Parent=gene-O5C65_000654;Dbxref=NCBI_GP:HJH9170822.1;Name=HJH9170822.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=O5C65_000654;product=valine--tRNA ligase;protein_id=HJH9170822.1;transl_table=11 DALFDA020000004.1 tpg gene 29041 30228 . - . ID=gene-O5C65_000655;Name=O5C65_000655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000655 DALFDA020000004.1 Protein Homology CDS 29041 30228 . - 0 ID=cds-HJH9170823.1;Parent=gene-O5C65_000655;Dbxref=NCBI_GP:HJH9170823.1;Name=HJH9170823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463334.1;locus_tag=O5C65_000655;product=YjgN family protein;protein_id=HJH9170823.1;transl_table=11 DALFDA020000004.1 tpg gene 30423 30926 . + . ID=gene-O5C65_000656;Name=O5C65_000656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000656 DALFDA020000004.1 Protein Homology CDS 30423 30926 . + 0 ID=cds-HJH9170824.1;Parent=gene-O5C65_000656;Dbxref=NCBI_GP:HJH9170824.1;Name=HJH9170824.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463333.1;locus_tag=O5C65_000656;product=GNAT family N-acetyltransferase;protein_id=HJH9170824.1;transl_table=11 DALFDA020000004.1 tpg gene 31033 31521 . + . ID=gene-O5C65_000657;Name=O5C65_000657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000657 DALFDA020000004.1 Protein Homology CDS 31033 31521 . + 0 ID=cds-HJH9170825.1;Parent=gene-O5C65_000657;Dbxref=NCBI_GP:HJH9170825.1;Name=HJH9170825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463332.1;locus_tag=O5C65_000657;product=DUF3617 domain-containing protein;protein_id=HJH9170825.1;transl_table=11 DALFDA020000004.1 tpg gene 31755 32567 . - . ID=gene-O5C65_000658;Name=miaE;gbkey=Gene;gene=miaE;gene_biotype=protein_coding;locus_tag=O5C65_000658 DALFDA020000004.1 Protein Homology CDS 31755 32567 . - 0 ID=cds-HJH9170826.1;Parent=gene-O5C65_000658;Dbxref=NCBI_GP:HJH9170826.1;Name=HJH9170826.1;Ontology_term=GO:0006400,GO:0004497,GO:0045301,GO:0046872;gbkey=CDS;gene=miaE;go_function=monooxygenase activity|0004497||IEA,tRNA 2-(methylsulfanyl)-N(6)-isopentenyladenosine(37) hydroxylase activity|0045301||IEA,metal ion binding|0046872||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463331.1;locus_tag=O5C65_000658;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;protein_id=HJH9170826.1;transl_table=11 DALFDA020000004.1 tpg gene 32579 32995 . - . ID=gene-O5C65_000659;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=O5C65_000659 DALFDA020000004.1 Protein Homology CDS 32579 32995 . - 0 ID=cds-HJH9170827.1;Parent=gene-O5C65_000659;Dbxref=NCBI_GP:HJH9170827.1;Name=HJH9170827.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463330.1;locus_tag=O5C65_000659;product=ribonuclease E inhibitor RraB;protein_id=HJH9170827.1;transl_table=11 DALFDA020000004.1 tpg gene 33096 33191 . + . ID=gene-O5C65_000660;Name=argL;gbkey=Gene;gene=argL;gene_biotype=protein_coding;locus_tag=O5C65_000660 DALFDA020000004.1 Protein Homology CDS 33096 33191 . + 0 ID=cds-HJH9170828.1;Parent=gene-O5C65_000660;Dbxref=NCBI_GP:HJH9170828.1;Name=HJH9170828.1;gbkey=CDS;gene=argL;inference=COORDINATES: protein motif:HMM:NF047283.2;locus_tag=O5C65_000660;product=putative translational regulatory protein ArgL;protein_id=HJH9170828.1;transl_table=11 DALFDA020000004.1 tpg gene 33161 34165 . + . ID=gene-O5C65_000661;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=O5C65_000661 DALFDA020000004.1 Protein Homology CDS 33161 34165 . + 0 ID=cds-HJH9170829.1;Parent=gene-O5C65_000661;Dbxref=NCBI_GP:HJH9170829.1;Name=HJH9170829.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463329.1;locus_tag=O5C65_000661;product=ornithine carbamoyltransferase;protein_id=HJH9170829.1;transl_table=11 DALFDA020000004.1 tpg gene 34239 34691 . - . ID=gene-O5C65_000662;Name=O5C65_000662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000662 DALFDA020000004.1 Protein Homology CDS 34239 34691 . - 0 ID=cds-HJH9170830.1;Parent=gene-O5C65_000662;Dbxref=NCBI_GP:HJH9170830.1;Name=HJH9170830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463328.1;locus_tag=O5C65_000662;product=YhcH/YjgK/YiaL family protein;protein_id=HJH9170830.1;transl_table=11 DALFDA020000004.1 tpg gene 35367 36587 . + . ID=gene-O5C65_000663;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=O5C65_000663 DALFDA020000004.1 Protein Homology CDS 35367 36587 . + 0 ID=cds-HJH9170831.1;Parent=gene-O5C65_000663;Dbxref=NCBI_GP:HJH9170831.1;Name=HJH9170831.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463327.1;locus_tag=O5C65_000663;product=arginine deiminase;protein_id=HJH9170831.1;transl_table=11 DALFDA020000004.1 tpg gene 36598 37530 . + . ID=gene-O5C65_000664;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=O5C65_000664 DALFDA020000004.1 Protein Homology CDS 36598 37530 . + 0 ID=cds-HJH9170832.1;Parent=gene-O5C65_000664;Dbxref=NCBI_GP:HJH9170832.1;Name=HJH9170832.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463326.1;locus_tag=O5C65_000664;product=carbamate kinase;protein_id=HJH9170832.1;transl_table=11 DALFDA020000004.1 tpg gene 37642 38646 . + . ID=gene-O5C65_000665;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=O5C65_000665 DALFDA020000004.1 Protein Homology CDS 37642 38646 . + 0 ID=cds-HJH9170833.1;Parent=gene-O5C65_000665;Dbxref=NCBI_GP:HJH9170833.1;Name=HJH9170833.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463325.1;locus_tag=O5C65_000665;product=ornithine carbamoyltransferase;protein_id=HJH9170833.1;transl_table=11 DALFDA020000004.1 tpg gene 38702 40105 . + . ID=gene-O5C65_000666;Name=O5C65_000666;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000666 DALFDA020000004.1 Protein Homology CDS 38702 40105 . + 0 ID=cds-HJH9170834.1;Parent=gene-O5C65_000666;Dbxref=NCBI_GP:HJH9170834.1;Name=HJH9170834.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463324.1;locus_tag=O5C65_000666;product=YfcC family protein;protein_id=HJH9170834.1;transl_table=11 DALFDA020000004.1 tpg gene 40292 40780 . + . ID=gene-O5C65_000667;Name=O5C65_000667;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000667 DALFDA020000004.1 Protein Homology CDS 40292 40780 . + 0 ID=cds-HJH9170835.1;Parent=gene-O5C65_000667;Dbxref=NCBI_GP:HJH9170835.1;Name=HJH9170835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463323.1;locus_tag=O5C65_000667;product=arginine repressor;protein_id=HJH9170835.1;transl_table=11 DALFDA020000004.1 tpg pseudogene 40750 40891 . - . ID=gene-O5C65_000668;Name=O5C65_000668;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_000668;pseudo=true DALFDA020000004.1 Protein Homology CDS 40750 40891 . - 0 ID=cds-O5C65_000668;Parent=gene-O5C65_000668;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453732.1;locus_tag=O5C65_000668;product=hypothetical protein;pseudo=true;transl_table=11 DALFDA020000004.1 tpg gene 40871 40972 . + . ID=gene-O5C65_000669;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=O5C65_000669 DALFDA020000004.1 Protein Homology CDS 40871 40972 . + 0 ID=cds-HJH9170836.1;Parent=gene-O5C65_000669;Dbxref=NCBI_GP:HJH9170836.1;Name=HJH9170836.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=O5C65_000669;product=pyr operon leader peptide;protein_id=HJH9170836.1;transl_table=11 DALFDA020000004.1 tpg gene 41008 41943 . + . ID=gene-O5C65_000670;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=O5C65_000670 DALFDA020000004.1 Protein Homology CDS 41008 41943 . + 0 ID=cds-HJH9170837.1;Parent=gene-O5C65_000670;Dbxref=NCBI_GP:HJH9170837.1;Name=HJH9170837.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463320.1;locus_tag=O5C65_000670;product=aspartate carbamoyltransferase;protein_id=HJH9170837.1;transl_table=11 DALFDA020000004.1 tpg gene 41956 42417 . + . ID=gene-O5C65_000671;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=O5C65_000671 DALFDA020000004.1 Protein Homology CDS 41956 42417 . + 0 ID=cds-HJH9170838.1;Parent=gene-O5C65_000671;Dbxref=NCBI_GP:HJH9170838.1;Name=HJH9170838.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=O5C65_000671;product=aspartate carbamoyltransferase regulatory subunit;protein_id=HJH9170838.1;transl_table=11 DALFDA020000004.1 tpg gene 42494 42880 . + . ID=gene-O5C65_000672;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=O5C65_000672 DALFDA020000004.1 Protein Homology CDS 42494 42880 . + 0 ID=cds-HJH9170839.1;Parent=gene-O5C65_000672;Dbxref=NCBI_GP:HJH9170839.1;Name=HJH9170839.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463318.1;locus_tag=O5C65_000672;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=HJH9170839.1;transl_table=11 DALFDA020000004.1 tpg gene 42955 43401 . + . ID=gene-O5C65_000673;Name=O5C65_000673;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000673 DALFDA020000004.1 Protein Homology CDS 42955 43401 . + 0 ID=cds-HJH9170840.1;Parent=gene-O5C65_000673;Dbxref=NCBI_GP:HJH9170840.1;Name=HJH9170840.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463317.1;locus_tag=O5C65_000673;product=transposase;protein_id=HJH9170840.1;transl_table=11 DALFDA020000004.1 tpg gene 43517 46225 . - . ID=gene-O5C65_000674;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=O5C65_000674 DALFDA020000004.1 Protein Homology CDS 43517 46225 . - 0 ID=cds-HJH9170841.1;Parent=gene-O5C65_000674;Dbxref=NCBI_GP:HJH9170841.1;Name=HJH9170841.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463316.1;locus_tag=O5C65_000674;product=magnesium-translocating P-type ATPase;protein_id=HJH9170841.1;transl_table=11 DALFDA020000004.1 tpg gene 46366 46464 . - . ID=gene-O5C65_000675;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;locus_tag=O5C65_000675 DALFDA020000004.1 Protein Homology CDS 46366 46464 . - 0 ID=cds-HJH9170842.1;Parent=gene-O5C65_000675;Dbxref=NCBI_GP:HJH9170842.1;Name=HJH9170842.1;gbkey=CDS;gene=mgtL;inference=COORDINATES: protein motif:HMM:NF028369.6;locus_tag=O5C65_000675;product=mgtA regulatory leader peptide MgtL;protein_id=HJH9170842.1;transl_table=11 DALFDA020000004.1 tpg gene 46609 47556 . + . ID=gene-O5C65_000676;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=O5C65_000676 DALFDA020000004.1 Protein Homology CDS 46609 47556 . + 0 ID=cds-HJH9170843.1;Parent=gene-O5C65_000676;Dbxref=NCBI_GP:HJH9170843.1;Name=HJH9170843.1;Ontology_term=GO:0005991,GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA;go_process=trehalose metabolic process|0005991||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463315.1;locus_tag=O5C65_000676;product=trehalose operon repressor TreR;protein_id=HJH9170843.1;transl_table=11 DALFDA020000004.1 tpg gene 47694 49112 . + . ID=gene-O5C65_000677;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=O5C65_000677 DALFDA020000004.1 Protein Homology CDS 47694 49112 . + 0 ID=cds-HJH9170844.1;Parent=gene-O5C65_000677;Dbxref=NCBI_GP:HJH9170844.1;Name=HJH9170844.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224799.1;locus_tag=O5C65_000677;product=PTS trehalose transporter subunit IIBC;protein_id=HJH9170844.1;transl_table=11 DALFDA020000004.1 tpg gene 49162 50814 . + . ID=gene-O5C65_000678;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=O5C65_000678 DALFDA020000004.1 Protein Homology CDS 49162 50814 . + 0 ID=cds-HJH9170845.1;Parent=gene-O5C65_000678;Dbxref=NCBI_GP:HJH9170845.1;Name=HJH9170845.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463314.1;locus_tag=O5C65_000678;product=alpha%2Calpha-phosphotrehalase;protein_id=HJH9170845.1;transl_table=11 DALFDA020000004.1 tpg gene 51223 53361 . + . ID=gene-O5C65_000679;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=O5C65_000679 DALFDA020000004.1 Protein Homology CDS 51223 53361 . + 0 ID=cds-HJH9170846.1;Parent=gene-O5C65_000679;Dbxref=NCBI_GP:HJH9170846.1;Name=HJH9170846.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463313.1;locus_tag=O5C65_000679;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=HJH9170846.1;transl_table=11 DALFDA020000004.1 tpg gene 53483 53947 . + . ID=gene-O5C65_000680;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=O5C65_000680 DALFDA020000004.1 Protein Homology CDS 53483 53947 . + 0 ID=cds-HJH9170847.1;Parent=gene-O5C65_000680;Dbxref=NCBI_GP:HJH9170847.1;Name=HJH9170847.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463312.1;locus_tag=O5C65_000680;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=HJH9170847.1;transl_table=11 DALFDA020000004.1 tpg gene 53951 54235 . - . ID=gene-O5C65_000681;Name=O5C65_000681;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000681 DALFDA020000004.1 Protein Homology CDS 53951 54235 . - 0 ID=cds-HJH9170848.1;Parent=gene-O5C65_000681;Dbxref=NCBI_GP:HJH9170848.1;Name=HJH9170848.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463311.1;locus_tag=O5C65_000681;product=type II toxin-antitoxin system RelE family toxin;protein_id=HJH9170848.1;transl_table=11 DALFDA020000004.1 tpg gene 54225 54467 . - . ID=gene-O5C65_000682;Name=O5C65_000682;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000682 DALFDA020000004.1 Protein Homology CDS 54225 54467 . - 0 ID=cds-HJH9170849.1;Parent=gene-O5C65_000682;Dbxref=NCBI_GP:HJH9170849.1;Name=HJH9170849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463310.1;locus_tag=O5C65_000682;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=HJH9170849.1;transl_table=11 DALFDA020000004.1 tpg gene 54545 56458 . - . ID=gene-O5C65_000683;Name=O5C65_000683;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000683 DALFDA020000004.1 Protein Homology CDS 54545 56458 . - 0 ID=cds-HJH9170850.1;Parent=gene-O5C65_000683;Dbxref=NCBI_GP:HJH9170850.1;Name=HJH9170850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463309.1;locus_tag=O5C65_000683;product=BglG family transcription antiterminator;protein_id=HJH9170850.1;transl_table=11 DALFDA020000004.1 tpg gene 56475 57215 . - . ID=gene-O5C65_000684;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=O5C65_000684 DALFDA020000004.1 Protein Homology CDS 56475 57215 . - 0 ID=cds-HJH9170851.1;Parent=gene-O5C65_000684;Dbxref=NCBI_GP:HJH9170851.1;Name=HJH9170851.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463308.2;locus_tag=O5C65_000684;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=HJH9170851.1;transl_table=11 DALFDA020000004.1 tpg gene 57212 58330 . - . ID=gene-O5C65_000685;Name=O5C65_000685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000685 DALFDA020000004.1 Protein Homology CDS 57212 58330 . - 0 ID=cds-HJH9170852.1;Parent=gene-O5C65_000685;Dbxref=NCBI_GP:HJH9170852.1;Name=HJH9170852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463307.1;locus_tag=O5C65_000685;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=HJH9170852.1;transl_table=11 DALFDA020000004.1 tpg gene 58314 59447 . - . ID=gene-O5C65_000686;Name=O5C65_000686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000686 DALFDA020000004.1 Protein Homology CDS 58314 59447 . - 0 ID=cds-HJH9170853.1;Parent=gene-O5C65_000686;Dbxref=NCBI_GP:HJH9170853.1;Name=HJH9170853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463306.1;locus_tag=O5C65_000686;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=HJH9170853.1;transl_table=11 DALFDA020000004.1 tpg gene 59506 60150 . - . ID=gene-O5C65_000687;Name=O5C65_000687;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000687 DALFDA020000004.1 Protein Homology CDS 59506 60150 . - 0 ID=cds-HJH9170854.1;Parent=gene-O5C65_000687;Dbxref=NCBI_GP:HJH9170854.1;Name=HJH9170854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463305.1;locus_tag=O5C65_000687;product=DUF4310 family protein;protein_id=HJH9170854.1;transl_table=11 DALFDA020000004.1 tpg gene 60162 60938 . - . ID=gene-O5C65_000688;Name=O5C65_000688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000688 DALFDA020000004.1 Protein Homology CDS 60162 60938 . - 0 ID=cds-HJH9170855.1;Parent=gene-O5C65_000688;Dbxref=NCBI_GP:HJH9170855.1;Name=HJH9170855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463304.1;locus_tag=O5C65_000688;product=DUF4311 domain-containing protein;protein_id=HJH9170855.1;transl_table=11 DALFDA020000004.1 tpg gene 60961 61263 . - . ID=gene-O5C65_000689;Name=O5C65_000689;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000689 DALFDA020000004.1 Protein Homology CDS 60961 61263 . - 0 ID=cds-HJH9170856.1;Parent=gene-O5C65_000689;Dbxref=NCBI_GP:HJH9170856.1;Name=HJH9170856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463303.1;locus_tag=O5C65_000689;product=DUF4312 family protein;protein_id=HJH9170856.1;transl_table=11 DALFDA020000004.1 tpg gene 61263 61625 . - . ID=gene-O5C65_000690;Name=O5C65_000690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000690 DALFDA020000004.1 Protein Homology CDS 61263 61625 . - 0 ID=cds-HJH9170857.1;Parent=gene-O5C65_000690;Dbxref=NCBI_GP:HJH9170857.1;Name=HJH9170857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463302.1;locus_tag=O5C65_000690;product=SFCGS family glycine-rich protein;protein_id=HJH9170857.1;transl_table=11 DALFDA020000004.1 tpg gene 61636 61974 . - . ID=gene-O5C65_000691;Name=O5C65_000691;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000691 DALFDA020000004.1 Protein Homology CDS 61636 61974 . - 0 ID=cds-HJH9170858.1;Parent=gene-O5C65_000691;Dbxref=NCBI_GP:HJH9170858.1;Name=HJH9170858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463301.1;locus_tag=O5C65_000691;product=glycine dehydrogenase;protein_id=HJH9170858.1;transl_table=11 DALFDA020000004.1 tpg gene 62252 62638 . - . ID=gene-O5C65_000692;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=O5C65_000692 DALFDA020000004.1 Protein Homology CDS 62252 62638 . - 0 ID=cds-HJH9170859.1;Parent=gene-O5C65_000692;Dbxref=NCBI_GP:HJH9170859.1;Name=HJH9170859.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463300.1;locus_tag=O5C65_000692;product=cytochrome b562;protein_id=HJH9170859.1;transl_table=11 DALFDA020000004.1 tpg gene 62737 64089 . - . ID=gene-O5C65_000693;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=O5C65_000693 DALFDA020000004.1 Protein Homology CDS 62737 64089 . - 0 ID=cds-HJH9170860.1;Parent=gene-O5C65_000693;Dbxref=NCBI_GP:HJH9170860.1;Name=HJH9170860.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463299.1;locus_tag=O5C65_000693;product=metalloprotease PmbA;protein_id=HJH9170860.1;transl_table=11 DALFDA020000004.1 tpg gene 64185 64736 . + . ID=gene-O5C65_000694;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=O5C65_000694 DALFDA020000004.1 Protein Homology CDS 64185 64736 . + 0 ID=cds-HJH9170861.1;Parent=gene-O5C65_000694;Dbxref=NCBI_GP:HJH9170861.1;Name=HJH9170861.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463298.1;locus_tag=O5C65_000694;product=ribosome biogenesis factor YjgA;protein_id=HJH9170861.1;transl_table=11 DALFDA020000004.1 tpg gene 64843 66216 . - . ID=gene-O5C65_000695;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=O5C65_000695 DALFDA020000004.1 Protein Homology CDS 64843 66216 . - 0 ID=cds-HJH9170862.1;Parent=gene-O5C65_000695;Dbxref=NCBI_GP:HJH9170862.1;Name=HJH9170862.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001219850.1;locus_tag=O5C65_000695;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=HJH9170862.1;transl_table=11 DALFDA020000004.1 tpg gene 66391 67389 . + . ID=gene-O5C65_000696;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=O5C65_000696 DALFDA020000004.1 Protein Homology CDS 66391 67389 . + 0 ID=cds-HJH9170863.1;Parent=gene-O5C65_000696;Dbxref=NCBI_GP:HJH9170863.1;Name=HJH9170863.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=O5C65_000696;product=class 1 fructose-bisphosphatase;protein_id=HJH9170863.1;transl_table=11 DALFDA020000004.1 tpg gene 67616 68146 . + . ID=gene-O5C65_000697;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=O5C65_000697 DALFDA020000004.1 Protein Homology CDS 67616 68146 . + 0 ID=cds-HJH9170864.1;Parent=gene-O5C65_000697;Dbxref=NCBI_GP:HJH9170864.1;Name=HJH9170864.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=O5C65_000697;product=inorganic diphosphatase;protein_id=HJH9170864.1;transl_table=11 DALFDA020000004.1 tpg gene 68556 69719 . + . ID=gene-O5C65_000698;Name=O5C65_000698;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000698 DALFDA020000004.1 Protein Homology CDS 68556 69719 . + 0 ID=cds-HJH9170865.1;Parent=gene-O5C65_000698;Dbxref=NCBI_GP:HJH9170865.1;Name=HJH9170865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463274.1;locus_tag=O5C65_000698;product=metallo-dependent hydrolase;protein_id=HJH9170865.1;transl_table=11 DALFDA020000004.1 tpg gene 69716 70924 . + . ID=gene-O5C65_000699;Name=O5C65_000699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000699 DALFDA020000004.1 Protein Homology CDS 69716 70924 . + 0 ID=cds-HJH9170866.1;Parent=gene-O5C65_000699;Dbxref=NCBI_GP:HJH9170866.1;Name=HJH9170866.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463273.1;locus_tag=O5C65_000699;product=MFS transporter;protein_id=HJH9170866.1;transl_table=11 DALFDA020000004.1 tpg gene 70978 71322 . - . ID=gene-O5C65_000700;Name=O5C65_000700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000700 DALFDA020000004.1 Protein Homology CDS 70978 71322 . - 0 ID=cds-HJH9170867.1;Parent=gene-O5C65_000700;Dbxref=NCBI_GP:HJH9170867.1;Name=HJH9170867.1;Ontology_term=GO:0061929;gbkey=CDS;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463272.1;locus_tag=O5C65_000700;product=gamma-glutamylcyclotransferase family protein;protein_id=HJH9170867.1;transl_table=11 DALFDA020000004.1 tpg gene 71325 75104 . - . ID=gene-O5C65_000701;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=O5C65_000701 DALFDA020000004.1 Protein Homology CDS 71325 75104 . - 0 ID=cds-HJH9170868.1;Parent=gene-O5C65_000701;Dbxref=NCBI_GP:HJH9170868.1;Name=HJH9170868.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463271.1;locus_tag=O5C65_000701;product=autotransporter assembly complex protein TamB;protein_id=HJH9170868.1;transl_table=11 DALFDA020000004.1 tpg gene 75101 76834 . - . ID=gene-O5C65_000702;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=O5C65_000702 DALFDA020000004.1 Protein Homology CDS 75101 76834 . - 0 ID=cds-HJH9170869.1;Parent=gene-O5C65_000702;Dbxref=NCBI_GP:HJH9170869.1;Name=HJH9170869.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463270.1;locus_tag=O5C65_000702;product=autotransporter assembly complex protein TamA;protein_id=HJH9170869.1;transl_table=11 DALFDA020000004.1 tpg gene 77047 77685 . + . ID=gene-O5C65_000703;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=O5C65_000703 DALFDA020000004.1 Protein Homology CDS 77047 77685 . + 0 ID=cds-HJH9170870.1;Parent=gene-O5C65_000703;Dbxref=NCBI_GP:HJH9170870.1;Name=HJH9170870.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463269.1;locus_tag=O5C65_000703;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=HJH9170870.1;transl_table=11 DALFDA020000004.1 tpg gene 77868 79211 . + . ID=gene-O5C65_000704;Name=O5C65_000704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000704 DALFDA020000004.1 Protein Homology CDS 77868 79211 . + 0 ID=cds-HJH9170871.1;Parent=gene-O5C65_000704;Dbxref=NCBI_GP:HJH9170871.1;Name=HJH9170871.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463268.1;locus_tag=O5C65_000704;product=hemolysin family protein;protein_id=HJH9170871.1;transl_table=11 DALFDA020000004.1 tpg gene 79296 79502 . - . ID=gene-O5C65_000705;Name=O5C65_000705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000705 DALFDA020000004.1 Protein Homology CDS 79296 79502 . - 0 ID=cds-HJH9170872.1;Parent=gene-O5C65_000705;Dbxref=NCBI_GP:HJH9170872.1;Name=HJH9170872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=O5C65_000705;product=DUF1107 domain-containing protein;protein_id=HJH9170872.1;transl_table=11 DALFDA020000004.1 tpg gene 79829 80386 . + . ID=gene-O5C65_000706;Name=O5C65_000706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000706 DALFDA020000004.1 Protein Homology CDS 79829 80386 . + 0 ID=cds-HJH9170873.1;Parent=gene-O5C65_000706;Dbxref=NCBI_GP:HJH9170873.1;Name=HJH9170873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463266.1;locus_tag=O5C65_000706;product=YtfJ family protein;protein_id=HJH9170873.1;transl_table=11 DALFDA020000004.1 tpg gene 80376 81116 . - . ID=gene-O5C65_000707;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=O5C65_000707 DALFDA020000004.1 Protein Homology CDS 80376 81116 . - 0 ID=cds-HJH9170874.1;Parent=gene-O5C65_000707;Dbxref=NCBI_GP:HJH9170874.1;Name=HJH9170874.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=O5C65_000707;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=HJH9170874.1;transl_table=11 DALFDA020000004.1 tpg gene 81384 83327 . + . ID=gene-O5C65_000708;Name=O5C65_000708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000708 DALFDA020000004.1 Protein Homology CDS 81384 83327 . + 0 ID=cds-HJH9170875.1;Parent=gene-O5C65_000708;Dbxref=NCBI_GP:HJH9170875.1;Name=HJH9170875.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463264.1;locus_tag=O5C65_000708;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=HJH9170875.1;transl_table=11 DALFDA020000004.1 tpg gene 83385 83771 . - . ID=gene-O5C65_000709;Name=O5C65_000709;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000709 DALFDA020000004.1 Protein Homology CDS 83385 83771 . - 0 ID=cds-HJH9170876.1;Parent=gene-O5C65_000709;Dbxref=NCBI_GP:HJH9170876.1;Name=HJH9170876.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463263.1;locus_tag=O5C65_000709;product=winged helix-turn-helix transcriptional regulator;protein_id=HJH9170876.1;transl_table=11 DALFDA020000004.1 tpg gene 83859 84707 . + . ID=gene-O5C65_000710;Name=O5C65_000710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000710 DALFDA020000004.1 Protein Homology CDS 83859 84707 . + 0 ID=cds-HJH9170877.1;Parent=gene-O5C65_000710;Dbxref=NCBI_GP:HJH9170877.1;Name=HJH9170877.1;Ontology_term=GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463262.1;locus_tag=O5C65_000710;product=SDR family oxidoreductase;protein_id=HJH9170877.1;transl_table=11 DALFDA020000004.1 tpg gene 84788 85753 . + . ID=gene-O5C65_000711;Name=O5C65_000711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000711 DALFDA020000004.1 Protein Homology CDS 84788 85753 . + 0 ID=cds-HJH9170878.1;Parent=gene-O5C65_000711;Dbxref=NCBI_GP:HJH9170878.1;Name=HJH9170878.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463261.1;locus_tag=O5C65_000711;product=DMT family transporter;protein_id=HJH9170878.1;transl_table=11 DALFDA020000004.1 tpg gene 85856 86518 . + . ID=gene-O5C65_000712;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=O5C65_000712 DALFDA020000004.1 Protein Homology CDS 85856 86518 . + 0 ID=cds-HJH9170879.1;Parent=gene-O5C65_000712;Dbxref=NCBI_GP:HJH9170879.1;Name=HJH9170879.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463260.1;locus_tag=O5C65_000712;product=iron-sulfur cluster repair protein YtfE;protein_id=HJH9170879.1;transl_table=11 DALFDA020000004.1 tpg gene 86630 88039 . - . ID=gene-O5C65_000713;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=O5C65_000713 DALFDA020000004.1 Protein Homology CDS 86630 88039 . - 0 ID=cds-HJH9170880.1;Parent=gene-O5C65_000713;Dbxref=NCBI_GP:HJH9170880.1;Name=HJH9170880.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463259.1;locus_tag=O5C65_000713;product=D-serine/D-alanine/glycine transporter;protein_id=HJH9170880.1;transl_table=11 DALFDA020000004.1 tpg gene 88335 88955 . - . ID=gene-O5C65_000714;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=O5C65_000714 DALFDA020000004.1 Protein Homology CDS 88335 88955 . - 0 ID=cds-HJH9170881.1;Parent=gene-O5C65_000714;Dbxref=NCBI_GP:HJH9170881.1;Name=HJH9170881.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=O5C65_000714;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=HJH9170881.1;transl_table=11 DALFDA020000004.1 tpg gene 89175 89810 . + . ID=gene-O5C65_000715;Name=O5C65_000715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000715 DALFDA020000004.1 Protein Homology CDS 89175 89810 . + 0 ID=cds-HJH9170882.1;Parent=gene-O5C65_000715;Dbxref=NCBI_GP:HJH9170882.1;Name=HJH9170882.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463257.1;locus_tag=O5C65_000715;product=LysM-like peptidoglycan-binding domain-containing protein;protein_id=HJH9170882.1;transl_table=11 DALFDA020000004.1 tpg gene 89860 90786 . - . ID=gene-O5C65_000716;Name=O5C65_000716;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000716 DALFDA020000004.1 Protein Homology CDS 89860 90786 . - 0 ID=cds-HJH9170883.1;Parent=gene-O5C65_000716;Dbxref=NCBI_GP:HJH9170883.1;Name=HJH9170883.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463256.1;locus_tag=O5C65_000716;product=DMT family transporter;protein_id=HJH9170883.1;transl_table=11 DALFDA020000004.1 tpg gene 90934 91383 . - . ID=gene-O5C65_000717;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=O5C65_000717 DALFDA020000004.1 Protein Homology CDS 90934 91383 . - 0 ID=cds-HJH9170884.1;Parent=gene-O5C65_000717;Dbxref=NCBI_GP:HJH9170884.1;Name=HJH9170884.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=O5C65_000717;product=50S ribosomal protein L9;protein_id=HJH9170884.1;transl_table=11 DALFDA020000004.1 tpg gene 91425 91652 . - . ID=gene-O5C65_000718;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=O5C65_000718 DALFDA020000004.1 Protein Homology CDS 91425 91652 . - 0 ID=cds-HJH9170885.1;Parent=gene-O5C65_000718;Dbxref=NCBI_GP:HJH9170885.1;Name=HJH9170885.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=O5C65_000718;product=30S ribosomal protein S18;protein_id=HJH9170885.1;transl_table=11 DALFDA020000004.1 tpg gene 91657 91971 . - . ID=gene-O5C65_000719;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=O5C65_000719 DALFDA020000004.1 Protein Homology CDS 91657 91971 . - 0 ID=cds-HJH9170886.1;Parent=gene-O5C65_000719;Dbxref=NCBI_GP:HJH9170886.1;Name=HJH9170886.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463253.1;locus_tag=O5C65_000719;product=primosomal replication protein N;protein_id=HJH9170886.1;transl_table=11 DALFDA020000004.1 tpg gene 91978 92373 . - . ID=gene-O5C65_000720;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=O5C65_000720 DALFDA020000004.1 Protein Homology CDS 91978 92373 . - 0 ID=cds-HJH9170887.1;Parent=gene-O5C65_000720;Dbxref=NCBI_GP:HJH9170887.1;Name=HJH9170887.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=O5C65_000720;product=30S ribosomal protein S6;protein_id=HJH9170887.1;transl_table=11 DALFDA020000004.1 tpg gene 92760 93035 . + . ID=gene-O5C65_000721;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=O5C65_000721 DALFDA020000004.1 Protein Homology CDS 92760 93035 . + 0 ID=cds-HJH9170888.1;Parent=gene-O5C65_000721;Dbxref=NCBI_GP:HJH9170888.1;Name=HJH9170888.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313202.1;locus_tag=O5C65_000721;product=DUF1471 family protein YjfY;protein_id=HJH9170888.1;transl_table=11 DALFDA020000004.1 tpg gene 93089 93646 . - . ID=gene-O5C65_000722;Name=O5C65_000722;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000722 DALFDA020000004.1 Protein Homology CDS 93089 93646 . - 0 ID=cds-HJH9170889.1;Parent=gene-O5C65_000722;Dbxref=NCBI_GP:HJH9170889.1;Name=HJH9170889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006911310.1;locus_tag=O5C65_000722;product=YagU family protein;protein_id=HJH9170889.1;transl_table=11 DALFDA020000004.1 tpg gene 93734 94420 . - . ID=gene-O5C65_000723;Name=O5C65_000723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000723 DALFDA020000004.1 Protein Homology CDS 93734 94420 . - 0 ID=cds-HJH9170890.1;Parent=gene-O5C65_000723;Dbxref=NCBI_GP:HJH9170890.1;Name=HJH9170890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463249.1;locus_tag=O5C65_000723;product=L-ribulose-5-phosphate 4-epimerase;protein_id=HJH9170890.1;transl_table=11 DALFDA020000004.1 tpg gene 94420 95274 . - . ID=gene-O5C65_000724;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=O5C65_000724 DALFDA020000004.1 Protein Homology CDS 94420 95274 . - 0 ID=cds-HJH9170891.1;Parent=gene-O5C65_000724;Dbxref=NCBI_GP:HJH9170891.1;Name=HJH9170891.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463248.1;locus_tag=O5C65_000724;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=HJH9170891.1;transl_table=11 DALFDA020000004.1 tpg gene 95284 95934 . - . ID=gene-O5C65_000725;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=O5C65_000725 DALFDA020000004.1 Protein Homology CDS 95284 95934 . - 0 ID=cds-HJH9170892.1;Parent=gene-O5C65_000725;Dbxref=NCBI_GP:HJH9170892.1;Name=HJH9170892.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463247.1;locus_tag=O5C65_000725;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=HJH9170892.1;transl_table=11 DALFDA020000004.1 tpg gene 95948 96412 . - . ID=gene-O5C65_000726;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=O5C65_000726 DALFDA020000004.1 Protein Homology CDS 95948 96412 . - 0 ID=cds-HJH9170893.1;Parent=gene-O5C65_000726;Dbxref=NCBI_GP:HJH9170893.1;Name=HJH9170893.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463246.1;locus_tag=O5C65_000726;product=PTS ascorbate transporter subunit IIA;protein_id=HJH9170893.1;transl_table=11 DALFDA020000004.1 tpg gene 96422 96727 . - . ID=gene-O5C65_000727;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=O5C65_000727 DALFDA020000004.1 Protein Homology CDS 96422 96727 . - 0 ID=cds-HJH9170894.1;Parent=gene-O5C65_000727;Dbxref=NCBI_GP:HJH9170894.1;Name=HJH9170894.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313197.1;locus_tag=O5C65_000727;product=PTS ascorbate transporter subunit IIB;protein_id=HJH9170894.1;transl_table=11 DALFDA020000004.1 tpg gene 96743 98140 . - . ID=gene-O5C65_000728;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=O5C65_000728 DALFDA020000004.1 Protein Homology CDS 96743 98140 . - 0 ID=cds-HJH9170895.1;Parent=gene-O5C65_000728;Dbxref=NCBI_GP:HJH9170895.1;Name=HJH9170895.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=O5C65_000728;product=PTS ascorbate transporter subunit IIC;protein_id=HJH9170895.1;transl_table=11 DALFDA020000004.1 tpg gene 98503 99567 . + . ID=gene-O5C65_000729;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=O5C65_000729 DALFDA020000004.1 Protein Homology CDS 98503 99567 . + 0 ID=cds-HJH9170896.1;Parent=gene-O5C65_000729;Dbxref=NCBI_GP:HJH9170896.1;Name=HJH9170896.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=O5C65_000729;product=L-ascorbate 6-phosphate lactonase;protein_id=HJH9170896.1;transl_table=11 DALFDA020000004.1 tpg gene 99672 100427 . + . ID=gene-O5C65_000730;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=O5C65_000730 DALFDA020000004.1 Protein Homology CDS 99672 100427 . + 0 ID=cds-HJH9170897.1;Parent=gene-O5C65_000730;Dbxref=NCBI_GP:HJH9170897.1;Name=HJH9170897.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463242.1;locus_tag=O5C65_000730;product=HTH-type transcriptional regulator UlaR;protein_id=HJH9170897.1;transl_table=11 DALFDA020000004.1 tpg gene 100424 101173 . - . ID=gene-O5C65_000731;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=O5C65_000731 DALFDA020000004.1 Protein Homology CDS 100424 101173 . - 0 ID=cds-HJH9170898.1;Parent=gene-O5C65_000731;Dbxref=NCBI_GP:HJH9170898.1;Name=HJH9170898.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463241.1;locus_tag=O5C65_000731;product=esterase;protein_id=HJH9170898.1;transl_table=11 DALFDA020000004.1 tpg gene 101357 101686 . + . ID=gene-O5C65_000732;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=O5C65_000732 DALFDA020000004.1 Protein Homology CDS 101357 101686 . + 0 ID=cds-HJH9170899.1;Parent=gene-O5C65_000732;Dbxref=NCBI_GP:HJH9170899.1;Name=HJH9170899.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463240.1;locus_tag=O5C65_000732;product=biofilm peroxide resistance protein BsmA;protein_id=HJH9170899.1;transl_table=11 DALFDA020000004.1 tpg gene 101817 102092 . + . ID=gene-O5C65_000733;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=O5C65_000733 DALFDA020000004.1 Protein Homology CDS 101817 102092 . + 0 ID=cds-HJH9170900.1;Parent=gene-O5C65_000733;Dbxref=NCBI_GP:HJH9170900.1;Name=HJH9170900.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134428.1;locus_tag=O5C65_000733;product=DUF1471 family protease activator YjfN;protein_id=HJH9170900.1;transl_table=11 DALFDA020000004.1 tpg gene 102137 103759 . - . ID=gene-O5C65_000734;Name=O5C65_000734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000734 DALFDA020000004.1 Protein Homology CDS 102137 103759 . - 0 ID=cds-HJH9170901.1;Parent=gene-O5C65_000734;Dbxref=NCBI_GP:HJH9170901.1;Name=HJH9170901.1;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463238.3;locus_tag=O5C65_000734;product=isovaleryl-CoA dehydrogenase;protein_id=HJH9170901.1;transl_table=11 DALFDA020000004.1 tpg gene 103844 105007 . - . ID=gene-O5C65_000735;Name=O5C65_000735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000735 DALFDA020000004.1 Protein Homology CDS 103844 105007 . - 0 ID=cds-HJH9170902.1;Parent=gene-O5C65_000735;Dbxref=NCBI_GP:HJH9170902.1;Name=HJH9170902.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463237.1;locus_tag=O5C65_000735;product=glutathionylspermidine synthase family protein;protein_id=HJH9170902.1;transl_table=11 DALFDA020000004.1 tpg gene 105010 105648 . - . ID=gene-O5C65_000736;Name=O5C65_000736;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000736 DALFDA020000004.1 Protein Homology CDS 105010 105648 . - 0 ID=cds-HJH9170903.1;Parent=gene-O5C65_000736;Dbxref=NCBI_GP:HJH9170903.1;Name=HJH9170903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463236.1;locus_tag=O5C65_000736;product=DUF1190 domain-containing protein;protein_id=HJH9170903.1;transl_table=11 DALFDA020000004.1 tpg gene 105658 106056 . - . ID=gene-O5C65_000737;Name=O5C65_000737;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000737 DALFDA020000004.1 Protein Homology CDS 105658 106056 . - 0 ID=cds-HJH9170904.1;Parent=gene-O5C65_000737;Dbxref=NCBI_GP:HJH9170904.1;Name=HJH9170904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463235.1;locus_tag=O5C65_000737;product=DUF350 domain-containing protein;protein_id=HJH9170904.1;transl_table=11 DALFDA020000004.1 tpg gene 106074 106757 . - . ID=gene-O5C65_000738;Name=O5C65_000738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000738 DALFDA020000004.1 Protein Homology CDS 106074 106757 . - 0 ID=cds-HJH9170905.1;Parent=gene-O5C65_000738;Dbxref=NCBI_GP:HJH9170905.1;Name=HJH9170905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463234.3;locus_tag=O5C65_000738;product=YjfK family protein;protein_id=HJH9170905.1;transl_table=11 DALFDA020000004.1 tpg pseudogene 106880 106981 . - . ID=gene-O5C65_000739;Name=O5C65_000739;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_000739;pseudo=true DALFDA020000004.1 Protein Homology CDS 106880 106981 . - 0 ID=cds-O5C65_000739;Parent=gene-O5C65_000739;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463233.1;locus_tag=O5C65_000739;product=hypothetical protein;pseudo=true;transl_table=11 DALFDA020000004.1 tpg gene 106981 107679 . - . ID=gene-O5C65_000740;Name=O5C65_000740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000740 DALFDA020000004.1 Protein Homology CDS 106981 107679 . - 0 ID=cds-HJH9170906.1;Parent=gene-O5C65_000740;Dbxref=NCBI_GP:HJH9170906.1;Name=HJH9170906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463232.1;locus_tag=O5C65_000740;product=PspA/IM30 family protein;protein_id=HJH9170906.1;transl_table=11 DALFDA020000004.1 tpg gene 107694 108098 . - . ID=gene-O5C65_000741;Name=O5C65_000741;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000741 DALFDA020000004.1 Protein Homology CDS 107694 108098 . - 0 ID=cds-HJH9170907.1;Parent=gene-O5C65_000741;Dbxref=NCBI_GP:HJH9170907.1;Name=HJH9170907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463231.1;locus_tag=O5C65_000741;product=YjfI family protein;protein_id=HJH9170907.1;transl_table=11 DALFDA020000004.1 tpg gene 108230 108961 . - . ID=gene-O5C65_000742;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=O5C65_000742 DALFDA020000004.1 Protein Homology CDS 108230 108961 . - 0 ID=cds-HJH9170908.1;Parent=gene-O5C65_000742;Dbxref=NCBI_GP:HJH9170908.1;Name=HJH9170908.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463230.1;locus_tag=O5C65_000742;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=HJH9170908.1;transl_table=11 DALFDA020000004.1 tpg gene 109052 111490 . - . ID=gene-O5C65_000743;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=O5C65_000743 DALFDA020000004.1 Protein Homology CDS 109052 111490 . - 0 ID=cds-HJH9170909.1;Parent=gene-O5C65_000743;Dbxref=NCBI_GP:HJH9170909.1;Name=HJH9170909.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463229.1;locus_tag=O5C65_000743;product=ribonuclease R;protein_id=HJH9170909.1;transl_table=11 DALFDA020000004.1 tpg gene 111528 111953 . - . ID=gene-O5C65_000744;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=O5C65_000744 DALFDA020000004.1 Protein Homology CDS 111528 111953 . - 0 ID=cds-HJH9170910.1;Parent=gene-O5C65_000744;Dbxref=NCBI_GP:HJH9170910.1;Name=HJH9170910.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=O5C65_000744;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=HJH9170910.1;transl_table=11 DALFDA020000004.1 tpg gene 112160 113458 . - . ID=gene-O5C65_000745;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=O5C65_000745 DALFDA020000004.1 Protein Homology CDS 112160 113458 . - 0 ID=cds-HJH9170911.1;Parent=gene-O5C65_000745;Dbxref=NCBI_GP:HJH9170911.1;Name=HJH9170911.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=O5C65_000745;product=adenylosuccinate synthase;protein_id=HJH9170911.1;transl_table=11 DALFDA020000004.1 tpg gene 113561 113758 . - . ID=gene-O5C65_000746;Name=O5C65_000746;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000746 DALFDA020000004.1 Protein Homology CDS 113561 113758 . - 0 ID=cds-HJH9170912.1;Parent=gene-O5C65_000746;Dbxref=NCBI_GP:HJH9170912.1;Name=HJH9170912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463226.1;locus_tag=O5C65_000746;product=DUF2065 domain-containing protein;protein_id=HJH9170912.1;transl_table=11 DALFDA020000004.1 tpg gene 113837 114841 . - . ID=gene-O5C65_000747;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=O5C65_000747 DALFDA020000004.1 Protein Homology CDS 113837 114841 . - 0 ID=cds-HJH9170913.1;Parent=gene-O5C65_000747;Dbxref=NCBI_GP:HJH9170913.1;Name=HJH9170913.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463225.1;locus_tag=O5C65_000747;product=protease modulator HflC;protein_id=HJH9170913.1;transl_table=11 DALFDA020000004.1 tpg gene 114844 116103 . - . ID=gene-O5C65_000748;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=O5C65_000748 DALFDA020000004.1 Protein Homology CDS 114844 116103 . - 0 ID=cds-HJH9170914.1;Parent=gene-O5C65_000748;Dbxref=NCBI_GP:HJH9170914.1;Name=HJH9170914.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463224.1;locus_tag=O5C65_000748;product=FtsH protease activity modulator HflK;protein_id=HJH9170914.1;transl_table=11 DALFDA020000004.1 tpg gene 116318 117598 . - . ID=gene-O5C65_000749;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=O5C65_000749 DALFDA020000004.1 Protein Homology CDS 116318 117598 . - 0 ID=cds-HJH9170915.1;Parent=gene-O5C65_000749;Dbxref=NCBI_GP:HJH9170915.1;Name=HJH9170915.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463223.1;locus_tag=O5C65_000749;product=ribosome rescue GTPase HflX;protein_id=HJH9170915.1;transl_table=11 DALFDA020000004.1 tpg gene 117670 117978 . - . ID=gene-O5C65_000750;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=O5C65_000750 DALFDA020000004.1 Protein Homology CDS 117670 117978 . - 0 ID=cds-HJH9170916.1;Parent=gene-O5C65_000750;Dbxref=NCBI_GP:HJH9170916.1;Name=HJH9170916.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463222.1;locus_tag=O5C65_000750;product=RNA chaperone Hfq;protein_id=HJH9170916.1;transl_table=11 DALFDA020000004.1 tpg gene 118061 119011 . - . ID=gene-O5C65_000751;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=O5C65_000751 DALFDA020000004.1 Protein Homology CDS 118061 119011 . - 0 ID=cds-HJH9170917.1;Parent=gene-O5C65_000751;Dbxref=NCBI_GP:HJH9170917.1;Name=HJH9170917.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463221.1;locus_tag=O5C65_000751;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=HJH9170917.1;transl_table=11 DALFDA020000004.1 tpg gene 119004 120860 . - . ID=gene-O5C65_000752;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=O5C65_000752 DALFDA020000004.1 Protein Homology CDS 119004 120860 . - 0 ID=cds-HJH9170918.1;Parent=gene-O5C65_000752;Dbxref=NCBI_GP:HJH9170918.1;Name=HJH9170918.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463220.1;locus_tag=O5C65_000752;product=DNA mismatch repair endonuclease MutL;protein_id=HJH9170918.1;transl_table=11 DALFDA020000004.1 tpg gene 120870 122192 . - . ID=gene-O5C65_000753;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=O5C65_000753 DALFDA020000004.1 Protein Homology CDS 120870 122192 . - 0 ID=cds-HJH9170919.1;Parent=gene-O5C65_000753;Dbxref=NCBI_GP:HJH9170919.1;Name=HJH9170919.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463219.1;locus_tag=O5C65_000753;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=HJH9170919.1;transl_table=11 DALFDA020000004.1 tpg gene 122209 122670 . - . ID=gene-O5C65_000754;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=O5C65_000754 DALFDA020000004.1 Protein Homology CDS 122209 122670 . - 0 ID=cds-HJH9170920.1;Parent=gene-O5C65_000754;Dbxref=NCBI_GP:HJH9170920.1;Name=HJH9170920.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463218.1;locus_tag=O5C65_000754;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=HJH9170920.1;transl_table=11 DALFDA020000004.1 tpg gene 122642 124189 . - . ID=gene-O5C65_000755;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=O5C65_000755 DALFDA020000004.1 Protein Homology CDS 122642 124189 . - 0 ID=cds-HJH9170921.1;Parent=gene-O5C65_000755;Dbxref=NCBI_GP:HJH9170921.1;Name=HJH9170921.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463217.1;locus_tag=O5C65_000755;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=HJH9170921.1;transl_table=11 DALFDA020000004.1 tpg gene 124188 125327 . + . ID=gene-O5C65_000756;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=O5C65_000756 DALFDA020000004.1 Protein Homology CDS 124188 125327 . + 0 ID=cds-HJH9170922.1;Parent=gene-O5C65_000756;Dbxref=NCBI_GP:HJH9170922.1;Name=HJH9170922.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=O5C65_000756;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=HJH9170922.1;transl_table=11 DALFDA020000004.1 tpg gene 125597 125672 . - . ID=gene-O5C65_000757;Name=O5C65_000757;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_000757 DALFDA020000004.1 tRNAscan-SE tRNA 125597 125672 . - . ID=rna-O5C65_000757;Parent=gene-O5C65_000757;anticodon=(pos:complement(125637..125639));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_000757;product=tRNA-Gly DALFDA020000004.1 tRNAscan-SE exon 125597 125672 . - . ID=exon-O5C65_000757-1;Parent=rna-O5C65_000757;anticodon=(pos:complement(125637..125639));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_000757;product=tRNA-Gly DALFDA020000004.1 tpg gene 125829 125904 . - . ID=gene-O5C65_000758;Name=O5C65_000758;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_000758 DALFDA020000004.1 tRNAscan-SE tRNA 125829 125904 . - . ID=rna-O5C65_000758;Parent=gene-O5C65_000758;anticodon=(pos:complement(125869..125871));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_000758;product=tRNA-Gly DALFDA020000004.1 tRNAscan-SE exon 125829 125904 . - . ID=exon-O5C65_000758-1;Parent=rna-O5C65_000758;anticodon=(pos:complement(125869..125871));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_000758;product=tRNA-Gly DALFDA020000004.1 tpg gene 126061 126136 . - . ID=gene-O5C65_000759;Name=O5C65_000759;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_000759 DALFDA020000004.1 tRNAscan-SE tRNA 126061 126136 . - . ID=rna-O5C65_000759;Parent=gene-O5C65_000759;anticodon=(pos:complement(126101..126103));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_000759;product=tRNA-Gly DALFDA020000004.1 tRNAscan-SE exon 126061 126136 . - . ID=exon-O5C65_000759-1;Parent=rna-O5C65_000759;anticodon=(pos:complement(126101..126103));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_000759;product=tRNA-Gly DALFDA020000004.1 tpg gene 126412 127152 . + . ID=gene-O5C65_000760;Name=O5C65_000760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000760 DALFDA020000004.1 Protein Homology CDS 126412 127152 . + 0 ID=cds-HJH9170923.1;Parent=gene-O5C65_000760;Dbxref=NCBI_GP:HJH9170923.1;Name=HJH9170923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463215.3;locus_tag=O5C65_000760;product=arginine ABC transporter substrate-binding protein;protein_id=HJH9170923.1;transl_table=11 DALFDA020000004.1 tpg gene 127214 127759 . - . ID=gene-O5C65_000761;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=O5C65_000761 DALFDA020000004.1 Protein Homology CDS 127214 127759 . - 0 ID=cds-HJH9170924.1;Parent=gene-O5C65_000761;Dbxref=NCBI_GP:HJH9170924.1;Name=HJH9170924.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=O5C65_000761;product=oligoribonuclease;protein_id=HJH9170924.1;transl_table=11 DALFDA020000004.1 tpg gene 127866 128918 . + . ID=gene-O5C65_000762;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=O5C65_000762 DALFDA020000004.1 Protein Homology CDS 127866 128918 . + 0 ID=cds-HJH9170925.1;Parent=gene-O5C65_000762;Dbxref=NCBI_GP:HJH9170925.1;Name=HJH9170925.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=O5C65_000762;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=HJH9170925.1;transl_table=11 DALFDA020000004.1 tpg gene 129010 129978 . + . ID=gene-O5C65_000763;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=O5C65_000763 DALFDA020000004.1 Protein Homology CDS 129010 129978 . + 0 ID=cds-HJH9170926.1;Parent=gene-O5C65_000763;Dbxref=NCBI_GP:HJH9170926.1;Name=HJH9170926.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463212.1;locus_tag=O5C65_000763;product=archaetidylserine decarboxylase;protein_id=HJH9170926.1;transl_table=11 DALFDA020000004.1 tpg gene 129997 133323 . + . ID=gene-O5C65_000764;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=O5C65_000764 DALFDA020000004.1 Protein Homology CDS 129997 133323 . + 0 ID=cds-HJH9170927.1;Parent=gene-O5C65_000764;Dbxref=NCBI_GP:HJH9170927.1;Name=HJH9170927.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463211.1;locus_tag=O5C65_000764;product=miniconductance mechanosensitive channel MscM;protein_id=HJH9170927.1;transl_table=11 DALFDA020000004.1 tpg gene 133460 133780 . - . ID=gene-O5C65_000765;Name=O5C65_000765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000765 DALFDA020000004.1 Protein Homology CDS 133460 133780 . - 0 ID=cds-HJH9170928.1;Parent=gene-O5C65_000765;Dbxref=NCBI_GP:HJH9170928.1;Name=HJH9170928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001682126.1;locus_tag=O5C65_000765;product=hypothetical protein;protein_id=HJH9170928.1;transl_table=11 DALFDA020000004.1 tpg gene 133845 135347 . - . ID=gene-O5C65_000766;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=O5C65_000766 DALFDA020000004.1 Protein Homology CDS 133845 135347 . - 0 ID=cds-HJH9170929.1;Parent=gene-O5C65_000766;Dbxref=NCBI_GP:HJH9170929.1;Name=HJH9170929.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463209.1;locus_tag=O5C65_000766;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=HJH9170929.1;transl_table=11 DALFDA020000004.1 tpg gene 135573 136550 . - . ID=gene-O5C65_000767;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=O5C65_000767 DALFDA020000004.1 Protein Homology CDS 135573 136550 . - 0 ID=cds-HJH9170930.1;Parent=gene-O5C65_000767;Dbxref=NCBI_GP:HJH9170930.1;Name=HJH9170930.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=O5C65_000767;product=elongation factor P--(R)-beta-lysine ligase;protein_id=HJH9170930.1;transl_table=11 DALFDA020000004.1 tpg gene 136873 138663 . + . ID=gene-O5C65_000768;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=O5C65_000768 DALFDA020000004.1 Protein Homology CDS 136873 138663 . + 0 ID=cds-HJH9170931.1;Parent=gene-O5C65_000768;Dbxref=NCBI_GP:HJH9170931.1;Name=HJH9170931.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463207.1;locus_tag=O5C65_000768;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=HJH9170931.1;transl_table=11 DALFDA020000004.1 tpg gene 138656 139390 . + . ID=gene-O5C65_000769;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=O5C65_000769 DALFDA020000004.1 Protein Homology CDS 138656 139390 . + 0 ID=cds-HJH9170932.1;Parent=gene-O5C65_000769;Dbxref=NCBI_GP:HJH9170932.1;Name=HJH9170932.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=O5C65_000769;product=fumarate reductase iron-sulfur protein;protein_id=HJH9170932.1;transl_table=11 DALFDA020000004.1 tpg gene 139401 139796 . + . ID=gene-O5C65_000770;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=O5C65_000770 DALFDA020000004.1 Protein Homology CDS 139401 139796 . + 0 ID=cds-HJH9170933.1;Parent=gene-O5C65_000770;Dbxref=NCBI_GP:HJH9170933.1;Name=HJH9170933.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463205.1;locus_tag=O5C65_000770;product=fumarate reductase subunit FrdC;protein_id=HJH9170933.1;transl_table=11 DALFDA020000004.1 tpg gene 139807 140166 . + . ID=gene-O5C65_000771;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=O5C65_000771 DALFDA020000004.1 Protein Homology CDS 139807 140166 . + 0 ID=cds-HJH9170934.1;Parent=gene-O5C65_000771;Dbxref=NCBI_GP:HJH9170934.1;Name=HJH9170934.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463204.1;locus_tag=O5C65_000771;product=fumarate reductase subunit FrdD;protein_id=HJH9170934.1;transl_table=11 DALFDA020000004.1 tpg gene 140277 140810 . + . ID=gene-O5C65_000772;Name=O5C65_000772;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000772 DALFDA020000004.1 Protein Homology CDS 140277 140810 . + 0 ID=cds-HJH9170935.1;Parent=gene-O5C65_000772;Dbxref=NCBI_GP:HJH9170935.1;Name=HJH9170935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463203.1;locus_tag=O5C65_000772;product=lipocalin family protein;protein_id=HJH9170935.1;transl_table=11 DALFDA020000004.1 tpg gene 140827 141144 . - . ID=gene-O5C65_000773;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=O5C65_000773 DALFDA020000004.1 Protein Homology CDS 140827 141144 . - 0 ID=cds-HJH9170936.1;Parent=gene-O5C65_000773;Dbxref=NCBI_GP:HJH9170936.1;Name=HJH9170936.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463202.1;locus_tag=O5C65_000773;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=HJH9170936.1;transl_table=11 DALFDA020000004.1 tpg gene 141343 141465 . + . ID=gene-O5C65_000774;Name=O5C65_000774;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000774 DALFDA020000004.1 GeneMarkS-2+ CDS 141343 141465 . + 0 ID=cds-HJH9170937.1;Parent=gene-O5C65_000774;Dbxref=NCBI_GP:HJH9170937.1;Name=HJH9170937.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_000774;product=hypothetical protein;protein_id=HJH9170937.1;transl_table=11 DALFDA020000004.1 tpg gene 141449 141988 . + . ID=gene-O5C65_000775;Name=O5C65_000775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000775 DALFDA020000004.1 Protein Homology CDS 141449 141988 . + 0 ID=cds-HJH9170938.1;Parent=gene-O5C65_000775;Dbxref=NCBI_GP:HJH9170938.1;Name=HJH9170938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001621742.1;locus_tag=O5C65_000775;product=helix-turn-helix domain-containing protein;protein_id=HJH9170938.1;transl_table=11 DALFDA020000004.1 tpg gene 142019 142165 . - . ID=gene-O5C65_000776;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=O5C65_000776 DALFDA020000004.1 Protein Homology CDS 142019 142165 . - 0 ID=cds-HJH9170939.1;Parent=gene-O5C65_000776;Dbxref=NCBI_GP:HJH9170939.1;Name=HJH9170939.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463200.1;locus_tag=O5C65_000776;product=lipoprotein toxin entericidin B;protein_id=HJH9170939.1;transl_table=11 DALFDA020000004.1 tpg gene 142273 142407 . - . ID=gene-O5C65_000777;Name=O5C65_000777;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000777 DALFDA020000004.1 Protein Homology CDS 142273 142407 . - 0 ID=cds-HJH9170940.1;Parent=gene-O5C65_000777;Dbxref=NCBI_GP:HJH9170940.1;Name=HJH9170940.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=O5C65_000777;product=entericidin A/B family lipoprotein;protein_id=HJH9170940.1;transl_table=11 DALFDA020000004.1 tpg gene 142468 143034 . - . ID=gene-O5C65_000778;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=O5C65_000778 DALFDA020000004.1 Protein Homology CDS 142468 143034 . - 0 ID=cds-HJH9170941.1;Parent=gene-O5C65_000778;Dbxref=NCBI_GP:HJH9170941.1;Name=HJH9170941.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=O5C65_000778;product=elongation factor P;protein_id=HJH9170941.1;transl_table=11 DALFDA020000004.1 tpg gene 143075 144103 . + . ID=gene-O5C65_000779;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=O5C65_000779 DALFDA020000004.1 Protein Homology CDS 143075 144103 . + 0 ID=cds-HJH9170942.1;Parent=gene-O5C65_000779;Dbxref=NCBI_GP:HJH9170942.1;Name=HJH9170942.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463197.1;locus_tag=O5C65_000779;product=EF-P beta-lysylation protein EpmB;protein_id=HJH9170942.1;transl_table=11 DALFDA020000004.1 tpg gene 144385 145242 . + . ID=gene-O5C65_000780;Name=O5C65_000780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000780 DALFDA020000004.1 Protein Homology CDS 144385 145242 . + 0 ID=cds-HJH9170943.1;Parent=gene-O5C65_000780;Dbxref=NCBI_GP:HJH9170943.1;Name=HJH9170943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463196.1;locus_tag=O5C65_000780;product=YjeJ family protein;protein_id=HJH9170943.1;transl_table=11 DALFDA020000004.1 tpg gene 145290 145643 . - . ID=gene-O5C65_000781;Name=O5C65_000781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000781 DALFDA020000004.1 Protein Homology CDS 145290 145643 . - 0 ID=cds-HJH9170944.1;Parent=gene-O5C65_000781;Dbxref=NCBI_GP:HJH9170944.1;Name=HJH9170944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=O5C65_000781;product=DUF4156 domain-containing protein;protein_id=HJH9170944.1;transl_table=11 DALFDA020000004.1 tpg gene 145887 147533 . - . ID=gene-O5C65_000782;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=O5C65_000782 DALFDA020000004.1 Protein Homology CDS 145887 147533 . - 0 ID=cds-HJH9170945.1;Parent=gene-O5C65_000782;Dbxref=NCBI_GP:HJH9170945.1;Name=HJH9170945.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=O5C65_000782;product=chaperonin GroEL;protein_id=HJH9170945.1;transl_table=11 DALFDA020000004.1 tpg gene 147577 147870 . - . ID=gene-O5C65_000783;Name=O5C65_000783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000783 DALFDA020000004.1 Protein Homology CDS 147577 147870 . - 0 ID=cds-HJH9170946.1;Parent=gene-O5C65_000783;Dbxref=NCBI_GP:HJH9170946.1;Name=HJH9170946.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=O5C65_000783;product=co-chaperone GroES;protein_id=HJH9170946.1;transl_table=11 DALFDA020000004.1 tpg gene 148146 149387 . + . ID=gene-O5C65_000784;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=O5C65_000784 DALFDA020000004.1 Protein Homology CDS 148146 149387 . + 0 ID=cds-HJH9170947.1;Parent=gene-O5C65_000784;Dbxref=NCBI_GP:HJH9170947.1;Name=HJH9170947.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463192.1;locus_tag=O5C65_000784;product=L-methionine/branched-chain amino acid transporter;protein_id=HJH9170947.1;transl_table=11 DALFDA020000004.1 tpg gene 149446 149922 . - . ID=gene-O5C65_000785;Name=O5C65_000785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000785 DALFDA020000004.1 Protein Homology CDS 149446 149922 . - 0 ID=cds-HJH9170948.1;Parent=gene-O5C65_000785;Dbxref=NCBI_GP:HJH9170948.1;Name=HJH9170948.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313148.1;locus_tag=O5C65_000785;product=FxsA family protein;protein_id=HJH9170948.1;transl_table=11 DALFDA020000004.1 tpg gene 150263 151699 . + . ID=gene-O5C65_000786;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=O5C65_000786 DALFDA020000004.1 Protein Homology CDS 150263 151699 . + 0 ID=cds-HJH9170949.1;Parent=gene-O5C65_000786;Dbxref=NCBI_GP:HJH9170949.1;Name=HJH9170949.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463190.1;locus_tag=O5C65_000786;product=aspartate ammonia-lyase;protein_id=HJH9170949.1;transl_table=11 DALFDA020000004.1 tpg gene 151814 153115 . + . ID=gene-O5C65_000787;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=O5C65_000787 DALFDA020000004.1 Protein Homology CDS 151814 153115 . + 0 ID=cds-HJH9170950.1;Parent=gene-O5C65_000787;Dbxref=NCBI_GP:HJH9170950.1;Name=HJH9170950.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463189.1;locus_tag=O5C65_000787;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=HJH9170950.1;transl_table=11 DALFDA020000004.1 tpg gene 153236 153583 . + . ID=gene-O5C65_000788;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=O5C65_000788 DALFDA020000004.1 Protein Homology CDS 153236 153583 . + 0 ID=cds-HJH9170951.1;Parent=gene-O5C65_000788;Dbxref=NCBI_GP:HJH9170951.1;Name=HJH9170951.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463188.1;locus_tag=O5C65_000788;product=divalent cation tolerance protein CutA;protein_id=HJH9170951.1;transl_table=11 DALFDA020000004.1 tpg gene 153559 155262 . + . ID=gene-O5C65_000789;Name=O5C65_000789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000789 DALFDA020000004.1 Protein Homology CDS 153559 155262 . + 0 ID=cds-HJH9170952.1;Parent=gene-O5C65_000789;Dbxref=NCBI_GP:HJH9170952.1;Name=HJH9170952.1;Ontology_term=GO:0017004,GO:0009055,GO:0030554,GO:0047134;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,adenyl nucleotide binding|0030554||IEA,protein-disulfide reductase [NAD(P)H] activity|0047134||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463187.1;locus_tag=O5C65_000789;product=protein-disulfide reductase DsbD;protein_id=HJH9170952.1;transl_table=11 DALFDA020000004.1 tpg gene 155299 155874 . + . ID=gene-O5C65_000790;Name=O5C65_000790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000790 DALFDA020000004.1 Protein Homology CDS 155299 155874 . + 0 ID=cds-HJH9170953.1;Parent=gene-O5C65_000790;Dbxref=NCBI_GP:HJH9170953.1;Name=HJH9170953.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463186.1;locus_tag=O5C65_000790;product=transcriptional regulator;protein_id=HJH9170953.1;transl_table=11 DALFDA020000004.1 tpg gene 155990 156065 . + . ID=gene-O5C65_000791;Name=O5C65_000791;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_000791 DALFDA020000004.1 tRNAscan-SE tRNA 155990 156065 . + . ID=rna-O5C65_000791;Parent=gene-O5C65_000791;anticodon=(pos:156023..156025);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_000791;product=tRNA-Phe DALFDA020000004.1 tRNAscan-SE exon 155990 156065 . + . ID=exon-O5C65_000791-1;Parent=rna-O5C65_000791;anticodon=(pos:156023..156025);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_000791;product=tRNA-Phe DALFDA020000004.1 tpg gene 156227 157489 . + . ID=gene-O5C65_000792;Name=O5C65_000792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000792 DALFDA020000004.1 Protein Homology CDS 156227 157489 . + 0 ID=cds-HJH9170954.1;Parent=gene-O5C65_000792;Dbxref=NCBI_GP:HJH9170954.1;Name=HJH9170954.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000954543.1;locus_tag=O5C65_000792;product=tyrosine-type recombinase/integrase;protein_id=HJH9170954.1;transl_table=11 DALFDA020000004.1 tpg pseudogene 158085 158375 . - . ID=gene-O5C65_000793;Name=O5C65_000793;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_000793;pseudo=true DALFDA020000004.1 Protein Homology CDS 158085 158375 . - 0 ID=cds-O5C65_000793;Parent=gene-O5C65_000793;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000511772.1;locus_tag=O5C65_000793;product=integrase domain-containing protein;pseudo=true;transl_table=11 DALFDA020000004.1 tpg gene 158694 159131 . + . ID=gene-O5C65_000794;Name=O5C65_000794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000794 DALFDA020000004.1 Protein Homology CDS 158694 159131 . + 0 ID=cds-HJH9170955.1;Parent=gene-O5C65_000794;Dbxref=NCBI_GP:HJH9170955.1;Name=HJH9170955.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534527.1;locus_tag=O5C65_000794;product=PTS sugar transporter subunit IIA;protein_id=HJH9170955.1;transl_table=11 DALFDA020000004.1 tpg gene 159381 160028 . + . ID=gene-O5C65_000795;Name=O5C65_000795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000795 DALFDA020000004.1 Protein Homology CDS 159381 160028 . + 0 ID=cds-HJH9170956.1;Parent=gene-O5C65_000795;Dbxref=NCBI_GP:HJH9170956.1;Name=HJH9170956.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000717815.1;locus_tag=O5C65_000795;product=HAD-IA family hydrolase;protein_id=HJH9170956.1;transl_table=11 DALFDA020000004.1 tpg gene 160067 160825 . - . ID=gene-O5C65_000796;Name=O5C65_000796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000796 DALFDA020000004.1 Protein Homology CDS 160067 160825 . - 0 ID=cds-HJH9170957.1;Parent=gene-O5C65_000796;Dbxref=NCBI_GP:HJH9170957.1;Name=HJH9170957.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113733.1;locus_tag=O5C65_000796;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=HJH9170957.1;transl_table=11 DALFDA020000004.1 tpg gene 161145 162017 . - . ID=gene-O5C65_000797;Name=O5C65_000797;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000797 DALFDA020000004.1 Protein Homology CDS 161145 162017 . - 0 ID=cds-HJH9170958.1;Parent=gene-O5C65_000797;Dbxref=NCBI_GP:HJH9170958.1;Name=HJH9170958.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000610756.1;locus_tag=O5C65_000797;product=helix-turn-helix transcriptional regulator;protein_id=HJH9170958.1;transl_table=11 DALFDA020000004.1 tpg gene 162123 163538 . + . ID=gene-O5C65_000798;Name=O5C65_000798;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000798 DALFDA020000004.1 Protein Homology CDS 162123 163538 . + 0 ID=cds-HJH9170959.1;Parent=gene-O5C65_000798;Dbxref=NCBI_GP:HJH9170959.1;Name=HJH9170959.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534558.1;locus_tag=O5C65_000798;product=MFS transporter;protein_id=HJH9170959.1;transl_table=11 DALFDA020000004.1 tpg gene 164008 164892 . - . ID=gene-O5C65_000799;Name=O5C65_000799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000799 DALFDA020000004.1 Protein Homology CDS 164008 164892 . - 0 ID=cds-HJH9170960.1;Parent=gene-O5C65_000799;Dbxref=NCBI_GP:HJH9170960.1;Name=HJH9170960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000605269.1;locus_tag=O5C65_000799;product=integrase domain-containing protein;protein_id=HJH9170960.1;transl_table=11 DALFDA020000004.1 tpg gene 165714 165956 . + . ID=gene-O5C65_000800;Name=O5C65_000800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000800 DALFDA020000004.1 Protein Homology CDS 165714 165956 . + 0 ID=cds-HJH9170961.1;Parent=gene-O5C65_000800;Dbxref=NCBI_GP:HJH9170961.1;Name=HJH9170961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000971973.1;locus_tag=O5C65_000800;product=metal-dependent hydrolase;protein_id=HJH9170961.1;transl_table=11 DALFDA020000004.1 tpg gene 166043 167191 . - . ID=gene-O5C65_000801;Name=O5C65_000801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000801 DALFDA020000004.1 Protein Homology CDS 166043 167191 . - 0 ID=cds-HJH9170962.1;Parent=gene-O5C65_000801;Dbxref=NCBI_GP:HJH9170962.1;Name=HJH9170962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019846362.1;locus_tag=O5C65_000801;product=PD-(D/E)XK nuclease family protein;protein_id=HJH9170962.1;transl_table=11 DALFDA020000004.1 tpg gene 167199 173147 . - . ID=gene-O5C65_000802;Name=O5C65_000802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000802 DALFDA020000004.1 Protein Homology CDS 167199 173147 . - 0 ID=cds-HJH9170963.1;Parent=gene-O5C65_000802;Dbxref=NCBI_GP:HJH9170963.1;Name=HJH9170963.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001064274.1;locus_tag=O5C65_000802;product=DEAD/DEAH box helicase;protein_id=HJH9170963.1;transl_table=11 DALFDA020000004.1 tpg gene 173162 175942 . - . ID=gene-O5C65_000803;Name=O5C65_000803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000803 DALFDA020000004.1 Protein Homology CDS 173162 175942 . - 0 ID=cds-HJH9170964.1;Parent=gene-O5C65_000803;Dbxref=NCBI_GP:HJH9170964.1;Name=HJH9170964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001085178.1;locus_tag=O5C65_000803;product=kinetochore protein;protein_id=HJH9170964.1;transl_table=11 DALFDA020000004.1 tpg gene 175978 178743 . - . ID=gene-O5C65_000804;Name=O5C65_000804;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000804 DALFDA020000004.1 Protein Homology CDS 175978 178743 . - 0 ID=cds-HJH9170965.1;Parent=gene-O5C65_000804;Dbxref=NCBI_GP:HJH9170965.1;Name=HJH9170965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915439.1;locus_tag=O5C65_000804;product=hypothetical protein;protein_id=HJH9170965.1;transl_table=11 DALFDA020000004.1 tpg gene 178753 179838 . - . ID=gene-O5C65_000805;Name=O5C65_000805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000805 DALFDA020000004.1 Protein Homology CDS 178753 179838 . - 0 ID=cds-HJH9170966.1;Parent=gene-O5C65_000805;Dbxref=NCBI_GP:HJH9170966.1;Name=HJH9170966.1;Ontology_term=GO:0006304,GO:0003677,GO:0003886,GO:0008168,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA (cytosine-5-)-methyltransferase activity|0003886||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019846358.1;locus_tag=O5C65_000805;product=DNA cytosine methyltransferase;protein_id=HJH9170966.1;transl_table=11 DALFDA020000004.1 tpg gene 180008 180502 . - . ID=gene-O5C65_000806;Name=O5C65_000806;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000806 DALFDA020000004.1 Protein Homology CDS 180008 180502 . - 0 ID=cds-HJH9170967.1;Parent=gene-O5C65_000806;Dbxref=NCBI_GP:HJH9170967.1;Name=HJH9170967.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622304.1;locus_tag=O5C65_000806;product=GNAT family N-acetyltransferase;protein_id=HJH9170967.1;transl_table=11 DALFDA020000004.1 tpg gene 180499 180792 . - . ID=gene-O5C65_000807;Name=O5C65_000807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000807 DALFDA020000004.1 Protein Homology CDS 180499 180792 . - 0 ID=cds-HJH9170968.1;Parent=gene-O5C65_000807;Dbxref=NCBI_GP:HJH9170968.1;Name=HJH9170968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228835.1;locus_tag=O5C65_000807;product=DUF1778 domain-containing protein;protein_id=HJH9170968.1;transl_table=11 DALFDA020000004.1 tpg pseudogene 181116 181193 . - . ID=gene-O5C65_000808;Name=O5C65_000808;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_000808;pseudo=true DALFDA020000004.1 Protein Homology CDS 181116 181193 . - 0 ID=cds-O5C65_000808;Parent=gene-O5C65_000808;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193311.1;locus_tag=O5C65_000808;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 DALFDA020000004.1 tpg gene 181747 182499 . + . ID=gene-O5C65_000809;Name=O5C65_000809;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000809 DALFDA020000004.1 Protein Homology CDS 181747 182499 . + 0 ID=cds-HJH9170969.1;Parent=gene-O5C65_000809;Dbxref=NCBI_GP:HJH9170969.1;Name=HJH9170969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463184.1;locus_tag=O5C65_000809;product=non-specific acid phosphatase;protein_id=HJH9170969.1;transl_table=11 DALFDA020000004.1 tpg gene 182747 183238 . - . ID=gene-O5C65_000810;Name=O5C65_000810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000810 DALFDA020000004.1 Protein Homology CDS 182747 183238 . - 0 ID=cds-HJH9170970.1;Parent=gene-O5C65_000810;Dbxref=NCBI_GP:HJH9170970.1;Name=HJH9170970.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463183.1;locus_tag=O5C65_000810;product=GNAT family N-acetyltransferase;protein_id=HJH9170970.1;transl_table=11 DALFDA020000004.1 tpg gene 183235 183528 . - . ID=gene-O5C65_000811;Name=O5C65_000811;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000811 DALFDA020000004.1 Protein Homology CDS 183235 183528 . - 0 ID=cds-HJH9170971.1;Parent=gene-O5C65_000811;Dbxref=NCBI_GP:HJH9170971.1;Name=HJH9170971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463182.1;locus_tag=O5C65_000811;product=DUF1778 domain-containing protein;protein_id=HJH9170971.1;transl_table=11 DALFDA020000004.1 tpg gene 183845 184066 . + . ID=gene-O5C65_000812;Name=O5C65_000812;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000812 DALFDA020000004.1 Protein Homology CDS 183845 184066 . + 0 ID=cds-HJH9170972.1;Parent=gene-O5C65_000812;Dbxref=NCBI_GP:HJH9170972.1;Name=HJH9170972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463181.1;locus_tag=O5C65_000812;product=hypothetical protein;protein_id=HJH9170972.1;transl_table=11 DALFDA020000004.1 tpg gene 184330 185205 . + . ID=gene-O5C65_000813;Name=O5C65_000813;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000813 DALFDA020000004.1 Protein Homology CDS 184330 185205 . + 0 ID=cds-HJH9170973.1;Parent=gene-O5C65_000813;Dbxref=NCBI_GP:HJH9170973.1;Name=HJH9170973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463180.1;locus_tag=O5C65_000813;product=AraC family transcriptional regulator;protein_id=HJH9170973.1;transl_table=11 DALFDA020000004.1 tpg gene 185202 185489 . + . ID=gene-O5C65_000814;Name=rtsB;gbkey=Gene;gene=rtsB;gene_biotype=protein_coding;locus_tag=O5C65_000814 DALFDA020000004.1 Protein Homology CDS 185202 185489 . + 0 ID=cds-HJH9170974.1;Parent=gene-O5C65_000814;Dbxref=NCBI_GP:HJH9170974.1;Name=HJH9170974.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rtsB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463179.3;locus_tag=O5C65_000814;product=transcriptional regulator RtsB;protein_id=HJH9170974.1;transl_table=11 DALFDA020000004.1 tpg gene 185465 185665 . - . ID=gene-O5C65_000815;Name=O5C65_000815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000815 DALFDA020000004.1 Protein Homology CDS 185465 185665 . - 0 ID=cds-HJH9170975.1;Parent=gene-O5C65_000815;Dbxref=NCBI_GP:HJH9170975.1;Name=HJH9170975.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.6;locus_tag=O5C65_000815;product=ATP-binding cassette domain-containing protein;protein_id=HJH9170975.1;transl_table=11 DALFDA020000004.1 tpg pseudogene 185685 185887 . + . ID=gene-O5C65_000816;Name=O5C65_000816;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_000816;pseudo=true DALFDA020000004.1 Protein Homology CDS 185685 185887 . + 0 ID=cds-O5C65_000816;Parent=gene-O5C65_000816;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463178.1;locus_tag=O5C65_000816;product=hypothetical protein;pseudo=true;transl_table=11 DALFDA020000004.1 tpg pseudogene 185895 186162 . + . ID=gene-O5C65_000817;Name=O5C65_000817;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_000817;pseudo=true DALFDA020000004.1 Protein Homology CDS 185895 186162 . + 0 ID=cds-O5C65_000817;Parent=gene-O5C65_000817;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463177.1;locus_tag=O5C65_000817;product=hypothetical protein;pseudo=true;transl_table=11 DALFDA020000004.1 tpg gene 186457 187362 . - . ID=gene-O5C65_000818;Name=O5C65_000818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000818 DALFDA020000004.1 Protein Homology CDS 186457 187362 . - 0 ID=cds-HJH9170976.1;Parent=gene-O5C65_000818;Dbxref=NCBI_GP:HJH9170976.1;Name=HJH9170976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463175.1;locus_tag=O5C65_000818;product=SdiA-regulated domain-containing protein;protein_id=HJH9170976.1;transl_table=11 DALFDA020000004.1 tpg gene 187666 189066 . + . ID=gene-O5C65_000819;Name=O5C65_000819;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000819 DALFDA020000004.1 Protein Homology CDS 187666 189066 . + 0 ID=cds-HJH9170977.1;Parent=gene-O5C65_000819;Dbxref=NCBI_GP:HJH9170977.1;Name=HJH9170977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463174.1;locus_tag=O5C65_000819;product=DUF7594 domain-containing protein;protein_id=HJH9170977.1;transl_table=11 DALFDA020000004.1 tpg gene 189150 189743 . - . ID=gene-O5C65_000820;Name=O5C65_000820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000820 DALFDA020000004.1 Protein Homology CDS 189150 189743 . - 0 ID=cds-HJH9170978.1;Parent=gene-O5C65_000820;Dbxref=NCBI_GP:HJH9170978.1;Name=HJH9170978.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001629474.1;locus_tag=O5C65_000820;product=TorD/DmsD family molecular chaperone;protein_id=HJH9170978.1;transl_table=11 DALFDA020000004.1 tpg gene 189819 190592 . - . ID=gene-O5C65_000821;Name=O5C65_000821;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000821 DALFDA020000004.1 Protein Homology CDS 189819 190592 . - 0 ID=cds-HJH9170979.1;Parent=gene-O5C65_000821;Dbxref=NCBI_GP:HJH9170979.1;Name=HJH9170979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463172.1;locus_tag=O5C65_000821;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=HJH9170979.1;transl_table=11 DALFDA020000004.1 tpg gene 190585 191211 . - . ID=gene-O5C65_000822;Name=O5C65_000822;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000822 DALFDA020000004.1 Protein Homology CDS 190585 191211 . - 0 ID=cds-HJH9170980.1;Parent=gene-O5C65_000822;Dbxref=NCBI_GP:HJH9170980.1;Name=HJH9170980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463171.1;locus_tag=O5C65_000822;product=DMSO/selenate family reductase complex B subunit;protein_id=HJH9170980.1;transl_table=11 DALFDA020000004.1 tpg gene 191225 193654 . - . ID=gene-O5C65_000823;Name=O5C65_000823;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000823 DALFDA020000004.1 Protein Homology CDS 191225 193654 . - 0 ID=cds-HJH9170981.1;Parent=gene-O5C65_000823;Dbxref=NCBI_GP:HJH9170981.1;Name=HJH9170981.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403483.1;locus_tag=O5C65_000823;product=DMSO/selenate family reductase complex A subunit;protein_id=HJH9170981.1;transl_table=11 DALFDA020000004.1 tpg gene 194029 195660 . + . ID=gene-O5C65_000824;Name=O5C65_000824;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000824 DALFDA020000004.1 Protein Homology CDS 194029 195660 . + 0 ID=cds-HJH9170982.1;Parent=gene-O5C65_000824;Dbxref=NCBI_GP:HJH9170982.1;Name=HJH9170982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463169.1;locus_tag=O5C65_000824;product=sensor histidine kinase;protein_id=HJH9170982.1;transl_table=11 DALFDA020000004.1 tpg gene 195657 196376 . + . ID=gene-O5C65_000825;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=O5C65_000825 DALFDA020000004.1 Protein Homology CDS 195657 196376 . + 0 ID=cds-HJH9170983.1;Parent=gene-O5C65_000825;Dbxref=NCBI_GP:HJH9170983.1;Name=HJH9170983.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463168.1;locus_tag=O5C65_000825;product=two-component system response regulator DcuR;protein_id=HJH9170983.1;transl_table=11 DALFDA020000004.1 tpg gene 196693 196959 . + . ID=gene-O5C65_000826;Name=O5C65_000826;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000826 DALFDA020000004.1 Protein Homology CDS 196693 196959 . + 0 ID=cds-HJH9170984.1;Parent=gene-O5C65_000826;Dbxref=NCBI_GP:HJH9170984.1;Name=HJH9170984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463167.1;locus_tag=O5C65_000826;product=hypothetical protein;protein_id=HJH9170984.1;transl_table=11 DALFDA020000004.1 tpg gene 197106 198446 . + . ID=gene-O5C65_000827;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=O5C65_000827 DALFDA020000004.1 Protein Homology CDS 197106 198446 . + 0 ID=cds-HJH9170985.1;Parent=gene-O5C65_000827;Dbxref=NCBI_GP:HJH9170985.1;Name=HJH9170985.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463166.1;locus_tag=O5C65_000827;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=HJH9170985.1;transl_table=11 DALFDA020000004.1 tpg gene 198542 200188 . + . ID=gene-O5C65_000828;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=O5C65_000828 DALFDA020000004.1 Protein Homology CDS 198542 200188 . + 0 ID=cds-HJH9170986.1;Parent=gene-O5C65_000828;Dbxref=NCBI_GP:HJH9170986.1;Name=HJH9170986.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463165.1;locus_tag=O5C65_000828;product=class I fumarate hydratase FumA;protein_id=HJH9170986.1;transl_table=11 DALFDA020000004.1 tpg gene 200286 201716 . - . ID=gene-O5C65_000829;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=O5C65_000829 DALFDA020000004.1 Protein Homology CDS 200286 201716 . - 0 ID=cds-HJH9170987.1;Parent=gene-O5C65_000829;Dbxref=NCBI_GP:HJH9170987.1;Name=HJH9170987.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463164.1;locus_tag=O5C65_000829;product=melibiose:sodium transporter MelB;protein_id=HJH9170987.1;transl_table=11 DALFDA020000004.1 tpg gene 201800 203155 . - . ID=gene-O5C65_000830;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=O5C65_000830 DALFDA020000004.1 Protein Homology CDS 201800 203155 . - 0 ID=cds-HJH9170988.1;Parent=gene-O5C65_000830;Dbxref=NCBI_GP:HJH9170988.1;Name=HJH9170988.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463163.1;locus_tag=O5C65_000830;product=alpha-galactosidase;protein_id=HJH9170988.1;transl_table=11 DALFDA020000004.1 tpg gene 203424 204356 . + . ID=gene-O5C65_000831;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=O5C65_000831 DALFDA020000004.1 Protein Homology CDS 203424 204356 . + 0 ID=cds-HJH9170989.1;Parent=gene-O5C65_000831;Dbxref=NCBI_GP:HJH9170989.1;Name=HJH9170989.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463162.1;locus_tag=O5C65_000831;product=transcriptional regulator MelR;protein_id=HJH9170989.1;transl_table=11 DALFDA020000004.1 tpg gene 204589 206856 . + . ID=gene-O5C65_000832;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=O5C65_000832 DALFDA020000004.1 Protein Homology CDS 204589 206856 . + 0 ID=cds-HJH9170990.1;Parent=gene-O5C65_000832;Dbxref=NCBI_GP:HJH9170990.1;Name=HJH9170990.1;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709824.2;locus_tag=O5C65_000832;product=arginine decarboxylase;protein_id=HJH9170990.1;transl_table=11 ##sequence-region DALFDA020000005.1 1 185634 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000005.1 tpg region 1 185634 . + . ID=DALFDA020000005.1:1..185634;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000005.1 tpg gene 1 131 . + . ID=gene-O5C65_000833;Name=O5C65_000833;gbkey=Gene;gene_biotype=ncRNA;locus_tag=O5C65_000833 DALFDA020000005.1 cmsearch ncRNA 1 131 . + . ID=rna-O5C65_000833;Parent=gene-O5C65_000833;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_000833;product=RtT sRNA DALFDA020000005.1 cmsearch exon 1 131 . + . ID=exon-O5C65_000833-1;Parent=rna-O5C65_000833;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_000833;product=RtT sRNA DALFDA020000005.1 tpg gene 314 679 . + . ID=gene-O5C65_000834;Name=O5C65_000834;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000834 DALFDA020000005.1 Protein Homology CDS 314 679 . + 0 ID=cds-HJH9170991.1;Parent=gene-O5C65_000834;Dbxref=NCBI_GP:HJH9170991.1;Name=HJH9170991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001091330.1;locus_tag=O5C65_000834;product=phage integrase central domain-containing protein;protein_id=HJH9170991.1;transl_table=11 DALFDA020000005.1 tpg gene 1019 2986 . + . ID=gene-O5C65_000835;Name=O5C65_000835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000835 DALFDA020000005.1 Protein Homology CDS 1019 2986 . + 0 ID=cds-HJH9170992.1;Parent=gene-O5C65_000835;Dbxref=NCBI_GP:HJH9170992.1;Name=HJH9170992.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000484537.1;locus_tag=O5C65_000835;product=AlbA family DNA-binding domain-containing protein;protein_id=HJH9170992.1;transl_table=11 DALFDA020000005.1 tpg gene 3059 4066 . - . ID=gene-O5C65_000836;Name=O5C65_000836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000836 DALFDA020000005.1 Protein Homology CDS 3059 4066 . - 0 ID=cds-HJH9170993.1;Parent=gene-O5C65_000836;Dbxref=NCBI_GP:HJH9170993.1;Name=HJH9170993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462535.1;locus_tag=O5C65_000836;product=substrate-binding domain-containing protein;protein_id=HJH9170993.1;transl_table=11 DALFDA020000005.1 tpg gene 4216 5340 . + . ID=gene-O5C65_000837;Name=O5C65_000837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000837 DALFDA020000005.1 Protein Homology CDS 4216 5340 . + 0 ID=cds-HJH9170994.1;Parent=gene-O5C65_000837;Dbxref=NCBI_GP:HJH9170994.1;Name=HJH9170994.1;Ontology_term=GO:0004062;gbkey=CDS;go_function=aryl sulfotransferase activity|0004062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462534.1;locus_tag=O5C65_000837;product=aryl-sulfate sulfotransferase;protein_id=HJH9170994.1;transl_table=11 DALFDA020000005.1 tpg gene 5398 6723 . + . ID=gene-O5C65_000838;Name=O5C65_000838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000838 DALFDA020000005.1 Protein Homology CDS 5398 6723 . + 0 ID=cds-HJH9170995.1;Parent=gene-O5C65_000838;Dbxref=NCBI_GP:HJH9170995.1;Name=HJH9170995.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462533.1;locus_tag=O5C65_000838;product=uracil-xanthine permease family protein;protein_id=HJH9170995.1;transl_table=11 DALFDA020000005.1 tpg gene 7279 8886 . + . ID=gene-O5C65_000839;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=O5C65_000839 DALFDA020000005.1 Protein Homology CDS 7279 8886 . + 0 ID=cds-HJH9170996.1;Parent=gene-O5C65_000839;Dbxref=NCBI_GP:HJH9170996.1;Name=HJH9170996.1;Ontology_term=GO:0042938,GO:0071916,GO:0030288;gbkey=CDS;gene=dppA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=dipeptide transmembrane transporter activity|0071916||IEA;go_process=dipeptide transport|0042938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=O5C65_000839;product=dipeptide ABC transporter periplasmic-binding protein DppA;protein_id=HJH9170996.1;transl_table=11 DALFDA020000005.1 tpg gene 9043 10062 . + . ID=gene-O5C65_000840;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=O5C65_000840 DALFDA020000005.1 Protein Homology CDS 9043 10062 . + 0 ID=cds-HJH9170997.1;Parent=gene-O5C65_000840;Dbxref=NCBI_GP:HJH9170997.1;Name=HJH9170997.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=O5C65_000840;product=dipeptide ABC transporter permease DppB;protein_id=HJH9170997.1;transl_table=11 DALFDA020000005.1 tpg gene 10072 10974 . + . ID=gene-O5C65_000841;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=O5C65_000841 DALFDA020000005.1 Protein Homology CDS 10072 10974 . + 0 ID=cds-HJH9170998.1;Parent=gene-O5C65_000841;Dbxref=NCBI_GP:HJH9170998.1;Name=HJH9170998.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=O5C65_000841;product=dipeptide ABC transporter permease DppC;protein_id=HJH9170998.1;transl_table=11 DALFDA020000005.1 tpg gene 10985 11968 . + . ID=gene-O5C65_000842;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=O5C65_000842 DALFDA020000005.1 Protein Homology CDS 10985 11968 . + 0 ID=cds-HJH9170999.1;Parent=gene-O5C65_000842;Dbxref=NCBI_GP:HJH9170999.1;Name=HJH9170999.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462529.1;locus_tag=O5C65_000842;product=dipeptide ABC transporter ATP-binding protein;protein_id=HJH9170999.1;transl_table=11 DALFDA020000005.1 tpg gene 11965 12978 . + . ID=gene-O5C65_000843;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=O5C65_000843 DALFDA020000005.1 Protein Homology CDS 11965 12978 . + 0 ID=cds-HJH9171000.1;Parent=gene-O5C65_000843;Dbxref=NCBI_GP:HJH9171000.1;Name=HJH9171000.1;Ontology_term=GO:0042938,GO:0071916,GO:0016020;gbkey=CDS;gene=dppF;go_component=membrane|0016020||IEA;go_function=dipeptide transmembrane transporter activity|0071916||IEA;go_process=dipeptide transport|0042938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462528.1;locus_tag=O5C65_000843;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=HJH9171000.1;transl_table=11 DALFDA020000005.1 tpg gene 13079 14377 . - . ID=gene-O5C65_000844;Name=O5C65_000844;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000844 DALFDA020000005.1 Protein Homology CDS 13079 14377 . - 0 ID=cds-HJH9171001.1;Parent=gene-O5C65_000844;Dbxref=NCBI_GP:HJH9171001.1;Name=HJH9171001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462527.1;locus_tag=O5C65_000844;product=amino acid permease;protein_id=HJH9171001.1;transl_table=11 DALFDA020000005.1 tpg pseudogene 14495 14698 . - . ID=gene-O5C65_000845;Name=O5C65_000845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_000845;pseudo=true DALFDA020000005.1 Protein Homology CDS 14495 14698 . - 0 ID=cds-O5C65_000845;Parent=gene-O5C65_000845;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008812697.1;locus_tag=O5C65_000845;product=PLP-dependent transferase;pseudo=true;transl_table=11 DALFDA020000005.1 tpg gene 15020 15127 . + . ID=gene-O5C65_000846;Name=O5C65_000846;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000846 DALFDA020000005.1 Protein Homology CDS 15020 15127 . + 0 ID=cds-HJH9171002.1;Parent=gene-O5C65_000846;Dbxref=NCBI_GP:HJH9171002.1;Name=HJH9171002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=O5C65_000846;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=HJH9171002.1;transl_table=11 DALFDA020000005.1 tpg gene 15209 16888 . - . ID=gene-O5C65_000847;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=O5C65_000847 DALFDA020000005.1 Protein Homology CDS 15209 16888 . - 0 ID=cds-HJH9171003.1;Parent=gene-O5C65_000847;Dbxref=NCBI_GP:HJH9171003.1;Name=HJH9171003.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462525.1;locus_tag=O5C65_000847;product=cellulose biosynthesis protein BcsG;protein_id=HJH9171003.1;transl_table=11 DALFDA020000005.1 tpg gene 16885 17076 . - . ID=gene-O5C65_000848;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=O5C65_000848 DALFDA020000005.1 Protein Homology CDS 16885 17076 . - 0 ID=cds-HJH9171004.1;Parent=gene-O5C65_000848;Dbxref=NCBI_GP:HJH9171004.1;Name=HJH9171004.1;Ontology_term=GO:0052324;gbkey=CDS;gene=bcsF;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462524.1;locus_tag=O5C65_000848;product=cellulose biosynthesis protein BcsF;protein_id=HJH9171004.1;transl_table=11 DALFDA020000005.1 tpg gene 17073 18644 . - . ID=gene-O5C65_000849;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=O5C65_000849 DALFDA020000005.1 Protein Homology CDS 17073 18644 . - 0 ID=cds-HJH9171005.1;Parent=gene-O5C65_000849;Dbxref=NCBI_GP:HJH9171005.1;Name=HJH9171005.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462523.1;locus_tag=O5C65_000849;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=HJH9171005.1;transl_table=11 DALFDA020000005.1 tpg gene 18889 19092 . + . ID=gene-O5C65_000850;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=O5C65_000850 DALFDA020000005.1 Protein Homology CDS 18889 19092 . + 0 ID=cds-HJH9171006.1;Parent=gene-O5C65_000850;Dbxref=NCBI_GP:HJH9171006.1;Name=HJH9171006.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462522.1;locus_tag=O5C65_000850;product=cellulose biosynthesis protein BcsR;protein_id=HJH9171006.1;transl_table=11 DALFDA020000005.1 tpg gene 19093 19845 . + . ID=gene-O5C65_000851;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=O5C65_000851 DALFDA020000005.1 Protein Homology CDS 19093 19845 . + 0 ID=cds-HJH9171007.1;Parent=gene-O5C65_000851;Dbxref=NCBI_GP:HJH9171007.1;Name=HJH9171007.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462521.1;locus_tag=O5C65_000851;product=cellulose biosynthesis protein BcsQ;protein_id=HJH9171007.1;transl_table=11 DALFDA020000005.1 tpg gene 19842 22466 . + . ID=gene-O5C65_000852;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=O5C65_000852 DALFDA020000005.1 Protein Homology CDS 19842 22466 . + 0 ID=cds-HJH9171008.1;Parent=gene-O5C65_000852;Dbxref=NCBI_GP:HJH9171008.1;Name=HJH9171008.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462520.1;locus_tag=O5C65_000852;product=UDP-forming cellulose synthase catalytic subunit;protein_id=HJH9171008.1;transl_table=11 DALFDA020000005.1 tpg gene 22477 24777 . + . ID=gene-O5C65_000853;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=O5C65_000853 DALFDA020000005.1 Protein Homology CDS 22477 24777 . + 0 ID=cds-HJH9171009.1;Parent=gene-O5C65_000853;Dbxref=NCBI_GP:HJH9171009.1;Name=HJH9171009.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462519.1;locus_tag=O5C65_000853;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=HJH9171009.1;transl_table=11 DALFDA020000005.1 tpg gene 24781 25890 . + . ID=gene-O5C65_000854;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=O5C65_000854 DALFDA020000005.1 Protein Homology CDS 24781 25890 . + 0 ID=cds-HJH9171010.1;Parent=gene-O5C65_000854;Dbxref=NCBI_GP:HJH9171010.1;Name=HJH9171010.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462518.1;locus_tag=O5C65_000854;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=HJH9171010.1;transl_table=11 DALFDA020000005.1 tpg gene 25872 29414 . + . ID=gene-O5C65_000855;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=O5C65_000855 DALFDA020000005.1 Protein Homology CDS 25872 29414 . + 0 ID=cds-HJH9171011.1;Parent=gene-O5C65_000855;Dbxref=NCBI_GP:HJH9171011.1;Name=HJH9171011.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=O5C65_000855;product=cellulose synthase complex outer membrane protein BcsC;protein_id=HJH9171011.1;transl_table=11 DALFDA020000005.1 tpg gene 29588 31594 . + . ID=gene-O5C65_000856;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=O5C65_000856 DALFDA020000005.1 Protein Homology CDS 29588 31594 . + 0 ID=cds-HJH9171012.1;Parent=gene-O5C65_000856;Dbxref=NCBI_GP:HJH9171012.1;Name=HJH9171012.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266355.1;locus_tag=O5C65_000856;product=biofilm formation regulator HmsP;protein_id=HJH9171012.1;transl_table=11 DALFDA020000005.1 tpg gene 31752 33038 . + . ID=gene-O5C65_000857;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=O5C65_000857 DALFDA020000005.1 Protein Homology CDS 31752 33038 . + 0 ID=cds-HJH9171013.1;Parent=gene-O5C65_000857;Dbxref=NCBI_GP:HJH9171013.1;Name=HJH9171013.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462515.1;locus_tag=O5C65_000857;product=C4-dicarboxylate transporter DctC;protein_id=HJH9171013.1;transl_table=11 DALFDA020000005.1 tpg gene 33258 34745 . + . ID=gene-O5C65_000858;Name=O5C65_000858;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000858 DALFDA020000005.1 Protein Homology CDS 33258 34745 . + 0 ID=cds-HJH9171014.1;Parent=gene-O5C65_000858;Dbxref=NCBI_GP:HJH9171014.1;Name=HJH9171014.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462514.1;locus_tag=O5C65_000858;product=M16 family metallopeptidase;protein_id=HJH9171014.1;transl_table=11 DALFDA020000005.1 tpg gene 34799 35728 . - . ID=gene-O5C65_000859;Name=O5C65_000859;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000859 DALFDA020000005.1 Protein Homology CDS 34799 35728 . - 0 ID=cds-HJH9171015.1;Parent=gene-O5C65_000859;Dbxref=NCBI_GP:HJH9171015.1;Name=HJH9171015.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462513.1;locus_tag=O5C65_000859;product=sugar kinase;protein_id=HJH9171015.1;transl_table=11 DALFDA020000005.1 tpg gene 35958 36725 . + . ID=gene-O5C65_000860;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=O5C65_000860 DALFDA020000005.1 Protein Homology CDS 35958 36725 . + 0 ID=cds-HJH9171016.1;Parent=gene-O5C65_000860;Dbxref=NCBI_GP:HJH9171016.1;Name=HJH9171016.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462512.1;locus_tag=O5C65_000860;product=cyclic-guanylate-specific phosphodiesterase;protein_id=HJH9171016.1;transl_table=11 DALFDA020000005.1 tpg gene 36835 38895 . + . ID=gene-O5C65_000861;Name=O5C65_000861;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000861 DALFDA020000005.1 Protein Homology CDS 36835 38895 . + 0 ID=cds-HJH9171017.1;Parent=gene-O5C65_000861;Dbxref=NCBI_GP:HJH9171017.1;Name=HJH9171017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462511.1;locus_tag=O5C65_000861;product=AsmA family protein;protein_id=HJH9171017.1;transl_table=11 DALFDA020000005.1 tpg gene 38935 40257 . - . ID=gene-O5C65_000862;Name=O5C65_000862;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000862 DALFDA020000005.1 Protein Homology CDS 38935 40257 . - 0 ID=cds-HJH9171018.1;Parent=gene-O5C65_000862;Dbxref=NCBI_GP:HJH9171018.1;Name=HJH9171018.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462510.1;locus_tag=O5C65_000862;product=MFS transporter;protein_id=HJH9171018.1;transl_table=11 DALFDA020000005.1 tpg gene 40608 41636 . - . ID=gene-O5C65_000863;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=O5C65_000863 DALFDA020000005.1 Protein Homology CDS 40608 41636 . - 0 ID=cds-HJH9171019.1;Parent=gene-O5C65_000863;Dbxref=NCBI_GP:HJH9171019.1;Name=HJH9171019.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462509.1;locus_tag=O5C65_000863;product=inner membrane protein YhjD;protein_id=HJH9171019.1;transl_table=11 DALFDA020000005.1 tpg gene 41709 42608 . - . ID=gene-O5C65_000864;Name=O5C65_000864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000864 DALFDA020000005.1 Protein Homology CDS 41709 42608 . - 0 ID=cds-HJH9171020.1;Parent=gene-O5C65_000864;Dbxref=NCBI_GP:HJH9171020.1;Name=HJH9171020.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462508.1;locus_tag=O5C65_000864;product=LysR family transcriptional regulator;protein_id=HJH9171020.1;transl_table=11 DALFDA020000005.1 tpg gene 43239 43841 . + . ID=gene-O5C65_000865;Name=O5C65_000865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000865 DALFDA020000005.1 Protein Homology CDS 43239 43841 . + 0 ID=cds-HJH9171021.1;Parent=gene-O5C65_000865;Dbxref=NCBI_GP:HJH9171021.1;Name=HJH9171021.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462507.1;locus_tag=O5C65_000865;product=response regulator transcription factor;protein_id=HJH9171021.1;transl_table=11 DALFDA020000005.1 tpg gene 43847 44203 . - . ID=gene-O5C65_000866;Name=O5C65_000866;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000866 DALFDA020000005.1 Protein Homology CDS 43847 44203 . - 0 ID=cds-HJH9171022.1;Parent=gene-O5C65_000866;Dbxref=NCBI_GP:HJH9171022.1;Name=HJH9171022.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462506.1;locus_tag=O5C65_000866;product=glycoside hydrolase family protein;protein_id=HJH9171022.1;transl_table=11 DALFDA020000005.1 tpg gene 44484 46073 . + . ID=gene-O5C65_000867;Name=O5C65_000867;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000867 DALFDA020000005.1 Protein Homology CDS 44484 46073 . + 0 ID=cds-HJH9171023.1;Parent=gene-O5C65_000867;Dbxref=NCBI_GP:HJH9171023.1;Name=HJH9171023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=O5C65_000867;product=STY4199 family HEPN domain-containing protein;protein_id=HJH9171023.1;transl_table=11 DALFDA020000005.1 tpg gene 46086 47735 . - . ID=gene-O5C65_000868;Name=O5C65_000868;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000868 DALFDA020000005.1 Protein Homology CDS 46086 47735 . - 0 ID=cds-HJH9171024.1;Parent=gene-O5C65_000868;Dbxref=NCBI_GP:HJH9171024.1;Name=HJH9171024.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462504.1;locus_tag=O5C65_000868;product=alpha%2Calpha-trehalase;protein_id=HJH9171024.1;transl_table=11 DALFDA020000005.1 tpg gene 48060 48779 . + . ID=gene-O5C65_000869;Name=O5C65_000869;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000869 DALFDA020000005.1 Protein Homology CDS 48060 48779 . + 0 ID=cds-HJH9171025.1;Parent=gene-O5C65_000869;Dbxref=NCBI_GP:HJH9171025.1;Name=HJH9171025.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462503.1;locus_tag=O5C65_000869;product=GntR family transcriptional regulator;protein_id=HJH9171025.1;transl_table=11 DALFDA020000005.1 tpg gene 48955 49932 . + . ID=gene-O5C65_000870;Name=fraB;gbkey=Gene;gene=fraB;gene_biotype=protein_coding;locus_tag=O5C65_000870 DALFDA020000005.1 Protein Homology CDS 48955 49932 . + 0 ID=cds-HJH9171026.1;Parent=gene-O5C65_000870;Dbxref=NCBI_GP:HJH9171026.1;Name=HJH9171026.1;gbkey=CDS;gene=fraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462502.1;locus_tag=O5C65_000870;product=6-phosphofructose-aspartate deglycase;protein_id=HJH9171026.1;transl_table=11 DALFDA020000005.1 tpg gene 49996 50841 . + . ID=gene-O5C65_000871;Name=fraD;gbkey=Gene;gene=fraD;gene_biotype=protein_coding;locus_tag=O5C65_000871 DALFDA020000005.1 Protein Homology CDS 49996 50841 . + 0 ID=cds-HJH9171027.1;Parent=gene-O5C65_000871;Dbxref=NCBI_GP:HJH9171027.1;Name=HJH9171027.1;gbkey=CDS;gene=fraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462501.1;locus_tag=O5C65_000871;product=fructose-aspartate kinase;protein_id=HJH9171027.1;transl_table=11 DALFDA020000005.1 tpg gene 50895 52214 . + . ID=gene-O5C65_000872;Name=O5C65_000872;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000872 DALFDA020000005.1 Protein Homology CDS 50895 52214 . + 0 ID=cds-HJH9171028.1;Parent=gene-O5C65_000872;Dbxref=NCBI_GP:HJH9171028.1;Name=HJH9171028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462500.1;locus_tag=O5C65_000872;product=anaerobic C4-dicarboxylate transporter family protein;protein_id=HJH9171028.1;transl_table=11 DALFDA020000005.1 tpg pseudogene 52273 52644 . + . ID=gene-O5C65_000873;Name=fraE;gbkey=Gene;gene=fraE;gene_biotype=pseudogene;locus_tag=O5C65_000873;pseudo=true DALFDA020000005.1 Protein Homology CDS 52273 52644 . + 0 ID=cds-O5C65_000873;Parent=gene-O5C65_000873;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=fraE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=O5C65_000873;product=fructose-asparagine asparaginase;pseudo=true;transl_table=11 DALFDA020000005.1 tpg pseudogene 52793 52873 . + . ID=gene-O5C65_000874;Name=O5C65_000874;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_000874;pseudo=true DALFDA020000005.1 Protein Homology CDS 52793 52873 . + 0 ID=cds-O5C65_000874;Parent=gene-O5C65_000874;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226344.1;locus_tag=O5C65_000874;product=asparaginase domain-containing protein;pseudo=true;transl_table=11 DALFDA020000005.1 tpg pseudogene 52866 52997 . + . ID=gene-O5C65_000875;Name=O5C65_000875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_000875;pseudo=true DALFDA020000005.1 Protein Homology CDS 52866 52997 . + 0 ID=cds-O5C65_000875;Parent=gene-O5C65_000875;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=O5C65_000875;product=L-asparaginase;pseudo=true;transl_table=11 DALFDA020000005.1 tpg gene 53044 54396 . - . ID=gene-O5C65_000876;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=O5C65_000876 DALFDA020000005.1 Protein Homology CDS 53044 54396 . - 0 ID=cds-HJH9171029.1;Parent=gene-O5C65_000876;Dbxref=NCBI_GP:HJH9171029.1;Name=HJH9171029.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=O5C65_000876;product=glutathione-disulfide reductase;protein_id=HJH9171029.1;transl_table=11 DALFDA020000005.1 tpg gene 54501 55343 . - . ID=gene-O5C65_000877;Name=O5C65_000877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000877 DALFDA020000005.1 Protein Homology CDS 54501 55343 . - 0 ID=cds-HJH9171030.1;Parent=gene-O5C65_000877;Dbxref=NCBI_GP:HJH9171030.1;Name=HJH9171030.1;Ontology_term=GO:0015976,GO:0070475,GO:0003723,GO:0008988,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=carbon utilization|0015976||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462497.1;locus_tag=O5C65_000877;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=HJH9171030.1;transl_table=11 DALFDA020000005.1 tpg gene 55967 56620 . + . ID=gene-O5C65_000878;Name=O5C65_000878;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000878 DALFDA020000005.1 Protein Homology CDS 55967 56620 . + 0 ID=cds-HJH9171031.1;Parent=gene-O5C65_000878;Dbxref=NCBI_GP:HJH9171031.1;Name=HJH9171031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000469196.1;locus_tag=O5C65_000878;product=hypothetical protein;protein_id=HJH9171031.1;transl_table=11 DALFDA020000005.1 tpg gene 56783 58825 . + . ID=gene-O5C65_000879;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=O5C65_000879 DALFDA020000005.1 Protein Homology CDS 56783 58825 . + 0 ID=cds-HJH9171032.1;Parent=gene-O5C65_000879;Dbxref=NCBI_GP:HJH9171032.1;Name=HJH9171032.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317218.1;locus_tag=O5C65_000879;product=oligopeptidase A;protein_id=HJH9171032.1;transl_table=11 DALFDA020000005.1 tpg gene 58832 59590 . + . ID=gene-O5C65_000880;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=O5C65_000880 DALFDA020000005.1 Protein Homology CDS 58832 59590 . + 0 ID=cds-HJH9171033.1;Parent=gene-O5C65_000880;Dbxref=NCBI_GP:HJH9171033.1;Name=HJH9171033.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462494.1;locus_tag=O5C65_000880;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=HJH9171033.1;transl_table=11 DALFDA020000005.1 tpg gene 59682 61154 . - . ID=gene-O5C65_000881;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=O5C65_000881 DALFDA020000005.1 Protein Homology CDS 59682 61154 . - 0 ID=cds-HJH9171034.1;Parent=gene-O5C65_000881;Dbxref=NCBI_GP:HJH9171034.1;Name=HJH9171034.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462493.1;locus_tag=O5C65_000881;product=dipeptide/tripeptide permease DtpB;protein_id=HJH9171034.1;transl_table=11 DALFDA020000005.1 tpg gene 61479 61913 . - . ID=gene-O5C65_000882;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=O5C65_000882 DALFDA020000005.1 Protein Homology CDS 61479 61913 . - 0 ID=cds-HJH9171035.1;Parent=gene-O5C65_000882;Dbxref=NCBI_GP:HJH9171035.1;Name=HJH9171035.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462492.1;locus_tag=O5C65_000882;product=universal stress protein UspA;protein_id=HJH9171035.1;transl_table=11 DALFDA020000005.1 tpg gene 62301 62636 . + . ID=gene-O5C65_000883;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=O5C65_000883 DALFDA020000005.1 Protein Homology CDS 62301 62636 . + 0 ID=cds-HJH9171036.1;Parent=gene-O5C65_000883;Dbxref=NCBI_GP:HJH9171036.1;Name=HJH9171036.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462491.1;locus_tag=O5C65_000883;product=universal stress protein UspB;protein_id=HJH9171036.1;transl_table=11 DALFDA020000005.1 tpg gene 62777 64273 . - . ID=gene-O5C65_000884;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=O5C65_000884 DALFDA020000005.1 Protein Homology CDS 62777 64273 . - 0 ID=cds-HJH9171037.1;Parent=gene-O5C65_000884;Dbxref=NCBI_GP:HJH9171037.1;Name=HJH9171037.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462490.1;locus_tag=O5C65_000884;product=inorganic phosphate transporter PitA;protein_id=HJH9171037.1;transl_table=11 DALFDA020000005.1 tpg gene 64504 65700 . + . ID=gene-O5C65_000885;Name=O5C65_000885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000885 DALFDA020000005.1 Protein Homology CDS 64504 65700 . + 0 ID=cds-HJH9171038.1;Parent=gene-O5C65_000885;Dbxref=NCBI_GP:HJH9171038.1;Name=HJH9171038.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462489.1;locus_tag=O5C65_000885;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=HJH9171038.1;transl_table=11 DALFDA020000005.1 tpg gene 66006 67073 . + . ID=gene-O5C65_000886;Name=O5C65_000886;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000886 DALFDA020000005.1 Protein Homology CDS 66006 67073 . + 0 ID=cds-HJH9171039.1;Parent=gene-O5C65_000886;Dbxref=NCBI_GP:HJH9171039.1;Name=HJH9171039.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462488.1;locus_tag=O5C65_000886;product=HlyD family secretion protein;protein_id=HJH9171039.1;transl_table=11 DALFDA020000005.1 tpg gene 67070 69811 . + . ID=gene-O5C65_000887;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=O5C65_000887 DALFDA020000005.1 Protein Homology CDS 67070 69811 . + 0 ID=cds-HJH9171040.1;Parent=gene-O5C65_000887;Dbxref=NCBI_GP:HJH9171040.1;Name=HJH9171040.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=rbbA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709254.1;locus_tag=O5C65_000887;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=HJH9171040.1;transl_table=11 DALFDA020000005.1 tpg gene 69811 70935 . + . ID=gene-O5C65_000888;Name=O5C65_000888;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000888 DALFDA020000005.1 Protein Homology CDS 69811 70935 . + 0 ID=cds-HJH9171041.1;Parent=gene-O5C65_000888;Dbxref=NCBI_GP:HJH9171041.1;Name=HJH9171041.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462486.1;locus_tag=O5C65_000888;product=ABC transporter permease;protein_id=HJH9171041.1;transl_table=11 DALFDA020000005.1 tpg gene 71025 71426 . - . ID=gene-O5C65_000889;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=O5C65_000889 DALFDA020000005.1 Protein Homology CDS 71025 71426 . - 0 ID=cds-HJH9171042.1;Parent=gene-O5C65_000889;Dbxref=NCBI_GP:HJH9171042.1;Name=HJH9171042.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462485.1;locus_tag=O5C65_000889;product=nickel-responsive transcriptional regulator NikR;protein_id=HJH9171042.1;transl_table=11 DALFDA020000005.1 tpg gene 71518 72096 . - . ID=gene-O5C65_000890;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=O5C65_000890 DALFDA020000005.1 Protein Homology CDS 71518 72096 . - 0 ID=cds-HJH9171043.1;Parent=gene-O5C65_000890;Dbxref=NCBI_GP:HJH9171043.1;Name=HJH9171043.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462484.1;locus_tag=O5C65_000890;product=4'-phosphopantetheinyl transferase AcpT;protein_id=HJH9171043.1;transl_table=11 DALFDA020000005.1 tpg gene 72148 73197 . - . ID=gene-O5C65_000891;Name=O5C65_000891;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000891 DALFDA020000005.1 Protein Homology CDS 72148 73197 . - 0 ID=cds-HJH9171044.1;Parent=gene-O5C65_000891;Dbxref=NCBI_GP:HJH9171044.1;Name=HJH9171044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462483.1;locus_tag=O5C65_000891;product=AI-2E family transporter;protein_id=HJH9171044.1;transl_table=11 DALFDA020000005.1 tpg gene 73287 74546 . + . ID=gene-O5C65_000892;Name=O5C65_000892;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000892 DALFDA020000005.1 Protein Homology CDS 73287 74546 . + 0 ID=cds-HJH9171045.1;Parent=gene-O5C65_000892;Dbxref=NCBI_GP:HJH9171045.1;Name=HJH9171045.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462482.3;locus_tag=O5C65_000892;product=MFS transporter;protein_id=HJH9171045.1;transl_table=11 DALFDA020000005.1 tpg gene 74550 75107 . - . ID=gene-O5C65_000893;Name=O5C65_000893;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000893 DALFDA020000005.1 Protein Homology CDS 74550 75107 . - 0 ID=cds-HJH9171046.1;Parent=gene-O5C65_000893;Dbxref=NCBI_GP:HJH9171046.1;Name=HJH9171046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462481.1;locus_tag=O5C65_000893;product=DcrB family lipoprotein;protein_id=HJH9171046.1;transl_table=11 DALFDA020000005.1 tpg gene 75180 75845 . - . ID=gene-O5C65_000894;Name=O5C65_000894;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000894 DALFDA020000005.1 Protein Homology CDS 75180 75845 . - 0 ID=cds-HJH9171047.1;Parent=gene-O5C65_000894;Dbxref=NCBI_GP:HJH9171047.1;Name=HJH9171047.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462480.1;locus_tag=O5C65_000894;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=HJH9171047.1;transl_table=11 DALFDA020000005.1 tpg gene 76015 76260 . + . ID=gene-O5C65_000895;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=O5C65_000895 DALFDA020000005.1 Protein Homology CDS 76015 76260 . + 0 ID=cds-HJH9171048.1;Parent=gene-O5C65_000895;Dbxref=NCBI_GP:HJH9171048.1;Name=HJH9171048.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462479.1;locus_tag=O5C65_000895;product=sulfurtransferase TusA;protein_id=HJH9171048.1;transl_table=11 DALFDA020000005.1 tpg gene 76284 77927 . - . ID=gene-O5C65_000896;Name=tcp;gbkey=Gene;gene=tcp;gene_biotype=protein_coding;locus_tag=O5C65_000896 DALFDA020000005.1 Protein Homology CDS 76284 77927 . - 0 ID=cds-HJH9171049.1;Parent=gene-O5C65_000896;Dbxref=NCBI_GP:HJH9171049.1;Name=HJH9171049.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888;gbkey=CDS;gene=tcp;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462478.1;locus_tag=O5C65_000896;product=methyl-accepting chemotaxis citrate transducer;protein_id=HJH9171049.1;transl_table=11 DALFDA020000005.1 tpg gene 78127 80325 . - . ID=gene-O5C65_000897;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=O5C65_000897 DALFDA020000005.1 Protein Homology CDS 78127 80325 . - 0 ID=cds-HJH9171050.1;Parent=gene-O5C65_000897;Dbxref=NCBI_GP:HJH9171050.1;Name=HJH9171050.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462477.1;locus_tag=O5C65_000897;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=HJH9171050.1;transl_table=11 DALFDA020000005.1 tpg gene 80406 81032 . - . ID=gene-O5C65_000898;Name=O5C65_000898;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000898 DALFDA020000005.1 Protein Homology CDS 80406 81032 . - 0 ID=cds-HJH9171051.1;Parent=gene-O5C65_000898;Dbxref=NCBI_GP:HJH9171051.1;Name=HJH9171051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462476.1;locus_tag=O5C65_000898;product=lysoplasmalogenase;protein_id=HJH9171051.1;transl_table=11 DALFDA020000005.1 tpg gene 81174 81545 . + . ID=gene-O5C65_000899;Name=O5C65_000899;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000899 DALFDA020000005.1 Protein Homology CDS 81174 81545 . + 0 ID=cds-HJH9171052.1;Parent=gene-O5C65_000899;Dbxref=NCBI_GP:HJH9171052.1;Name=HJH9171052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462475.1;locus_tag=O5C65_000899;product=DUF2500 domain-containing protein;protein_id=HJH9171052.1;transl_table=11 DALFDA020000005.1 tpg gene 81567 81836 . - . ID=gene-O5C65_000900;Name=O5C65_000900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000900 DALFDA020000005.1 Protein Homology CDS 81567 81836 . - 0 ID=cds-HJH9171053.1;Parent=gene-O5C65_000900;Dbxref=NCBI_GP:HJH9171053.1;Name=HJH9171053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=O5C65_000900;product=DUF1145 family protein;protein_id=HJH9171053.1;transl_table=11 DALFDA020000005.1 tpg gene 81826 82422 . - . ID=gene-O5C65_000901;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=O5C65_000901 DALFDA020000005.1 Protein Homology CDS 81826 82422 . - 0 ID=cds-HJH9171054.1;Parent=gene-O5C65_000901;Dbxref=NCBI_GP:HJH9171054.1;Name=HJH9171054.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462473.1;locus_tag=O5C65_000901;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=HJH9171054.1;transl_table=11 DALFDA020000005.1 tpg gene 82548 84023 . + . ID=gene-O5C65_000902;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=O5C65_000902 DALFDA020000005.1 Protein Homology CDS 82548 84023 . + 0 ID=cds-HJH9171055.1;Parent=gene-O5C65_000902;Dbxref=NCBI_GP:HJH9171055.1;Name=HJH9171055.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462472.1;locus_tag=O5C65_000902;product=signal recognition particle-docking protein FtsY;protein_id=HJH9171055.1;transl_table=11 DALFDA020000005.1 tpg gene 84026 84694 . + . ID=gene-O5C65_000903;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=O5C65_000903 DALFDA020000005.1 Protein Homology CDS 84026 84694 . + 0 ID=cds-HJH9171056.1;Parent=gene-O5C65_000903;Dbxref=NCBI_GP:HJH9171056.1;Name=HJH9171056.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462471.1;locus_tag=O5C65_000903;product=cell division ATP-binding protein FtsE;protein_id=HJH9171056.1;transl_table=11 DALFDA020000005.1 tpg gene 84687 85742 . + . ID=gene-O5C65_000904;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=O5C65_000904 DALFDA020000005.1 Protein Homology CDS 84687 85742 . + 0 ID=cds-HJH9171057.1;Parent=gene-O5C65_000904;Dbxref=NCBI_GP:HJH9171057.1;Name=HJH9171057.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462470.1;locus_tag=O5C65_000904;product=permease-like cell division protein FtsX;protein_id=HJH9171057.1;transl_table=11 DALFDA020000005.1 tpg gene 85988 86842 . + . ID=gene-O5C65_000905;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=O5C65_000905 DALFDA020000005.1 Protein Homology CDS 85988 86842 . + 0 ID=cds-HJH9171058.1;Parent=gene-O5C65_000905;Dbxref=NCBI_GP:HJH9171058.1;Name=HJH9171058.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462469.1;locus_tag=O5C65_000905;product=RNA polymerase sigma factor RpoH;protein_id=HJH9171058.1;transl_table=11 DALFDA020000005.1 tpg gene 87164 88267 . + . ID=gene-O5C65_000906;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=O5C65_000906 DALFDA020000005.1 Protein Homology CDS 87164 88267 . + 0 ID=cds-HJH9171059.1;Parent=gene-O5C65_000906;Dbxref=NCBI_GP:HJH9171059.1;Name=HJH9171059.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=O5C65_000906;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=HJH9171059.1;transl_table=11 DALFDA020000005.1 tpg gene 88351 88485 . - . ID=gene-O5C65_000907;Name=O5C65_000907;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000907 DALFDA020000005.1 Protein Homology CDS 88351 88485 . - 0 ID=cds-HJH9171060.1;Parent=gene-O5C65_000907;Dbxref=NCBI_GP:HJH9171060.1;Name=HJH9171060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462467.1;locus_tag=O5C65_000907;product=hypothetical protein;protein_id=HJH9171060.1;transl_table=11 DALFDA020000005.1 tpg gene 88463 88846 . - . ID=gene-O5C65_000908;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=O5C65_000908 DALFDA020000005.1 Protein Homology CDS 88463 88846 . - 0 ID=cds-HJH9171061.1;Parent=gene-O5C65_000908;Dbxref=NCBI_GP:HJH9171061.1;Name=HJH9171061.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462466.1;locus_tag=O5C65_000908;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=HJH9171061.1;transl_table=11 DALFDA020000005.1 tpg gene 89268 90377 . + . ID=gene-O5C65_000909;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=O5C65_000909 DALFDA020000005.1 Protein Homology CDS 89268 90377 . + 0 ID=cds-HJH9171062.1;Parent=gene-O5C65_000909;Dbxref=NCBI_GP:HJH9171062.1;Name=HJH9171062.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462465.1;locus_tag=O5C65_000909;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=HJH9171062.1;transl_table=11 DALFDA020000005.1 tpg gene 90437 91363 . + . ID=gene-O5C65_000910;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=O5C65_000910 DALFDA020000005.1 Protein Homology CDS 90437 91363 . + 0 ID=cds-HJH9171063.1;Parent=gene-O5C65_000910;Dbxref=NCBI_GP:HJH9171063.1;Name=HJH9171063.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=O5C65_000910;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=HJH9171063.1;transl_table=11 DALFDA020000005.1 tpg gene 91360 92637 . + . ID=gene-O5C65_000911;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=O5C65_000911 DALFDA020000005.1 Protein Homology CDS 91360 92637 . + 0 ID=cds-HJH9171064.1;Parent=gene-O5C65_000911;Dbxref=NCBI_GP:HJH9171064.1;Name=HJH9171064.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462463.1;locus_tag=O5C65_000911;product=branched chain amino acid ABC transporter permease LivM;protein_id=HJH9171064.1;transl_table=11 DALFDA020000005.1 tpg gene 92634 93401 . + . ID=gene-O5C65_000912;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=O5C65_000912 DALFDA020000005.1 Protein Homology CDS 92634 93401 . + 0 ID=cds-HJH9171065.1;Parent=gene-O5C65_000912;Dbxref=NCBI_GP:HJH9171065.1;Name=HJH9171065.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=O5C65_000912;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=HJH9171065.1;transl_table=11 DALFDA020000005.1 tpg gene 93403 94116 . + . ID=gene-O5C65_000913;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=O5C65_000913 DALFDA020000005.1 Protein Homology CDS 93403 94116 . + 0 ID=cds-HJH9171066.1;Parent=gene-O5C65_000913;Dbxref=NCBI_GP:HJH9171066.1;Name=HJH9171066.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462461.1;locus_tag=O5C65_000913;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=HJH9171066.1;transl_table=11 DALFDA020000005.1 tpg gene 94248 94469 . + . ID=gene-O5C65_000914;Name=O5C65_000914;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000914 DALFDA020000005.1 Protein Homology CDS 94248 94469 . + 0 ID=cds-HJH9171067.1;Parent=gene-O5C65_000914;Dbxref=NCBI_GP:HJH9171067.1;Name=HJH9171067.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229268.1;locus_tag=O5C65_000914;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=HJH9171067.1;transl_table=11 DALFDA020000005.1 tpg gene 94466 94834 . + . ID=gene-O5C65_000915;Name=O5C65_000915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000915 DALFDA020000005.1 Protein Homology CDS 94466 94834 . + 0 ID=cds-HJH9171068.1;Parent=gene-O5C65_000915;Dbxref=NCBI_GP:HJH9171068.1;Name=HJH9171068.1;Ontology_term=GO:0016301,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=kinase activity|0016301||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462459.1;locus_tag=O5C65_000915;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=HJH9171068.1;transl_table=11 DALFDA020000005.1 tpg gene 95093 96409 . + . ID=gene-O5C65_000916;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=O5C65_000916 DALFDA020000005.1 Protein Homology CDS 95093 96409 . + 0 ID=cds-HJH9171069.1;Parent=gene-O5C65_000916;Dbxref=NCBI_GP:HJH9171069.1;Name=HJH9171069.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462458.1;locus_tag=O5C65_000916;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=HJH9171069.1;transl_table=11 DALFDA020000005.1 tpg gene 96514 97401 . + . ID=gene-O5C65_000917;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=O5C65_000917 DALFDA020000005.1 Protein Homology CDS 96514 97401 . + 0 ID=cds-HJH9171070.1;Parent=gene-O5C65_000917;Dbxref=NCBI_GP:HJH9171070.1;Name=HJH9171070.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=O5C65_000917;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=HJH9171070.1;transl_table=11 DALFDA020000005.1 tpg gene 97398 98243 . + . ID=gene-O5C65_000918;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=O5C65_000918 DALFDA020000005.1 Protein Homology CDS 97398 98243 . + 0 ID=cds-HJH9171071.1;Parent=gene-O5C65_000918;Dbxref=NCBI_GP:HJH9171071.1;Name=HJH9171071.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=O5C65_000918;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=HJH9171071.1;transl_table=11 DALFDA020000005.1 tpg gene 98245 99315 . + . ID=gene-O5C65_000919;Name=O5C65_000919;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000919 DALFDA020000005.1 Protein Homology CDS 98245 99315 . + 0 ID=cds-HJH9171072.1;Parent=gene-O5C65_000919;Dbxref=NCBI_GP:HJH9171072.1;Name=HJH9171072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462455.1;locus_tag=O5C65_000919;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=HJH9171072.1;transl_table=11 DALFDA020000005.1 tpg gene 99312 100052 . + . ID=gene-O5C65_000920;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=O5C65_000920 DALFDA020000005.1 Protein Homology CDS 99312 100052 . + 0 ID=cds-HJH9171073.1;Parent=gene-O5C65_000920;Dbxref=NCBI_GP:HJH9171073.1;Name=HJH9171073.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462454.1;locus_tag=O5C65_000920;product=glycerophosphodiester phosphodiesterase;protein_id=HJH9171073.1;transl_table=11 DALFDA020000005.1 tpg gene 100065 100481 . - . ID=gene-O5C65_000921;Name=O5C65_000921;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000921 DALFDA020000005.1 Protein Homology CDS 100065 100481 . - 0 ID=cds-HJH9171074.1;Parent=gene-O5C65_000921;Dbxref=NCBI_GP:HJH9171074.1;Name=HJH9171074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462453.1;locus_tag=O5C65_000921;product=DUF2756 family protein;protein_id=HJH9171074.1;transl_table=11 DALFDA020000005.1 tpg gene 100607 102349 . + . ID=gene-O5C65_000922;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=O5C65_000922 DALFDA020000005.1 Protein Homology CDS 100607 102349 . + 0 ID=cds-HJH9171075.1;Parent=gene-O5C65_000922;Dbxref=NCBI_GP:HJH9171075.1;Name=HJH9171075.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462452.1;locus_tag=O5C65_000922;product=gamma-glutamyltransferase;protein_id=HJH9171075.1;transl_table=11 DALFDA020000005.1 tpg gene 102394 103428 . - . ID=gene-O5C65_000923;Name=O5C65_000923;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000923 DALFDA020000005.1 Protein Homology CDS 102394 103428 . - 0 ID=cds-HJH9171076.1;Parent=gene-O5C65_000923;Dbxref=NCBI_GP:HJH9171076.1;Name=HJH9171076.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462451.1;locus_tag=O5C65_000923;product=phosphotriesterase family protein;protein_id=HJH9171076.1;transl_table=11 DALFDA020000005.1 tpg gene 103425 104396 . - . ID=gene-O5C65_000924;Name=O5C65_000924;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000924 DALFDA020000005.1 Protein Homology CDS 103425 104396 . - 0 ID=cds-HJH9171077.1;Parent=gene-O5C65_000924;Dbxref=NCBI_GP:HJH9171077.1;Name=HJH9171077.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462450.1;locus_tag=O5C65_000924;product=DMT family transporter;protein_id=HJH9171077.1;transl_table=11 DALFDA020000005.1 tpg gene 104450 105211 . - . ID=gene-O5C65_000925;Name=O5C65_000925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000925 DALFDA020000005.1 Protein Homology CDS 104450 105211 . - 0 ID=cds-HJH9171078.1;Parent=gene-O5C65_000925;Dbxref=NCBI_GP:HJH9171078.1;Name=HJH9171078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462449.1;locus_tag=O5C65_000925;product=glutamine amidotransferase;protein_id=HJH9171078.1;transl_table=11 DALFDA020000005.1 tpg gene 105227 106441 . - . ID=gene-O5C65_000926;Name=O5C65_000926;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000926 DALFDA020000005.1 Protein Homology CDS 105227 106441 . - 0 ID=cds-HJH9171079.1;Parent=gene-O5C65_000926;Dbxref=NCBI_GP:HJH9171079.1;Name=HJH9171079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462448.3;locus_tag=O5C65_000926;product=PfkB family carbohydrate kinase;protein_id=HJH9171079.1;transl_table=11 DALFDA020000005.1 tpg gene 106706 107194 . - . ID=gene-O5C65_000927;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=O5C65_000927 DALFDA020000005.1 Protein Homology CDS 106706 107194 . - 0 ID=cds-HJH9171080.1;Parent=gene-O5C65_000927;Dbxref=NCBI_GP:HJH9171080.1;Name=HJH9171080.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462447.1;locus_tag=O5C65_000927;product=N-acetyltransferase;protein_id=HJH9171080.1;transl_table=11 DALFDA020000005.1 tpg gene 107662 108699 . + . ID=gene-O5C65_000928;Name=O5C65_000928;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000928 DALFDA020000005.1 Protein Homology CDS 107662 108699 . + 0 ID=cds-HJH9171081.1;Parent=gene-O5C65_000928;Dbxref=NCBI_GP:HJH9171081.1;Name=HJH9171081.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462446.1;locus_tag=O5C65_000928;product=oxidoreductase;protein_id=HJH9171081.1;transl_table=11 DALFDA020000005.1 tpg gene 108823 109518 . + . ID=gene-O5C65_000929;Name=O5C65_000929;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000929 DALFDA020000005.1 Protein Homology CDS 108823 109518 . + 0 ID=cds-HJH9171082.1;Parent=gene-O5C65_000929;Dbxref=NCBI_GP:HJH9171082.1;Name=HJH9171082.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=O5C65_000929;product=pirin family protein;protein_id=HJH9171082.1;transl_table=11 DALFDA020000005.1 tpg gene 109648 110643 . + . ID=gene-O5C65_000930;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=O5C65_000930 DALFDA020000005.1 Protein Homology CDS 109648 110643 . + 0 ID=cds-HJH9171083.1;Parent=gene-O5C65_000930;Dbxref=NCBI_GP:HJH9171083.1;Name=HJH9171083.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=O5C65_000930;product=gluconate operon transcriptional repressor GntR;protein_id=HJH9171083.1;transl_table=11 DALFDA020000005.1 tpg gene 110782 111315 . + . ID=gene-O5C65_000931;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=O5C65_000931 DALFDA020000005.1 Protein Homology CDS 110782 111315 . + 0 ID=cds-HJH9171084.1;Parent=gene-O5C65_000931;Dbxref=NCBI_GP:HJH9171084.1;Name=HJH9171084.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462443.1;locus_tag=O5C65_000931;product=gluconokinase;protein_id=HJH9171084.1;transl_table=11 DALFDA020000005.1 tpg gene 111312 112652 . + . ID=gene-O5C65_000932;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=O5C65_000932 DALFDA020000005.1 Protein Homology CDS 111312 112652 . + 0 ID=cds-HJH9171085.1;Parent=gene-O5C65_000932;Dbxref=NCBI_GP:HJH9171085.1;Name=HJH9171085.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462442.1;locus_tag=O5C65_000932;product=gluconate transporter;protein_id=HJH9171085.1;transl_table=11 DALFDA020000005.1 tpg pseudogene 112767 112841 . - . ID=gene-O5C65_000933;Name=O5C65_000933;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_000933;pseudo=true DALFDA020000005.1 Protein Homology CDS 112767 112841 . - 0 ID=cds-O5C65_000933;Parent=gene-O5C65_000933;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312306.1;locus_tag=O5C65_000933;product=MarC family protein;pseudo=true;transl_table=11 DALFDA020000005.1 tpg gene 113076 114182 . + . ID=gene-O5C65_000934;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=O5C65_000934 DALFDA020000005.1 Protein Homology CDS 113076 114182 . + 0 ID=cds-HJH9171086.1;Parent=gene-O5C65_000934;Dbxref=NCBI_GP:HJH9171086.1;Name=HJH9171086.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462440.1;locus_tag=O5C65_000934;product=aspartate-semialdehyde dehydrogenase;protein_id=HJH9171086.1;transl_table=11 DALFDA020000005.1 tpg gene 114529 116715 . + . ID=gene-O5C65_000935;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=O5C65_000935 DALFDA020000005.1 Protein Homology CDS 114529 116715 . + 0 ID=cds-HJH9171087.1;Parent=gene-O5C65_000935;Dbxref=NCBI_GP:HJH9171087.1;Name=HJH9171087.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462439.1;locus_tag=O5C65_000935;product=1%2C4-alpha-glucan branching enzyme;protein_id=HJH9171087.1;transl_table=11 DALFDA020000005.1 tpg gene 116712 118688 . + . ID=gene-O5C65_000936;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=O5C65_000936 DALFDA020000005.1 Protein Homology CDS 116712 118688 . + 0 ID=cds-HJH9171088.1;Parent=gene-O5C65_000936;Dbxref=NCBI_GP:HJH9171088.1;Name=HJH9171088.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462438.1;locus_tag=O5C65_000936;product=glycogen debranching protein GlgX;protein_id=HJH9171088.1;transl_table=11 DALFDA020000005.1 tpg gene 118703 119998 . + . ID=gene-O5C65_000937;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=O5C65_000937 DALFDA020000005.1 Protein Homology CDS 118703 119998 . + 0 ID=cds-HJH9171089.1;Parent=gene-O5C65_000937;Dbxref=NCBI_GP:HJH9171089.1;Name=HJH9171089.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462437.1;locus_tag=O5C65_000937;product=glucose-1-phosphate adenylyltransferase;protein_id=HJH9171089.1;transl_table=11 DALFDA020000005.1 tpg gene 119998 121431 . + . ID=gene-O5C65_000938;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=O5C65_000938 DALFDA020000005.1 Protein Homology CDS 119998 121431 . + 0 ID=cds-HJH9171090.1;Parent=gene-O5C65_000938;Dbxref=NCBI_GP:HJH9171090.1;Name=HJH9171090.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462436.1;locus_tag=O5C65_000938;product=glycogen synthase GlgA;protein_id=HJH9171090.1;transl_table=11 DALFDA020000005.1 tpg gene 121451 123898 . + . ID=gene-O5C65_000939;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=O5C65_000939 DALFDA020000005.1 Protein Homology CDS 121451 123898 . + 0 ID=cds-HJH9171091.1;Parent=gene-O5C65_000939;Dbxref=NCBI_GP:HJH9171091.1;Name=HJH9171091.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436446.1;locus_tag=O5C65_000939;product=glycogen phosphorylase;protein_id=HJH9171091.1;transl_table=11 DALFDA020000005.1 tpg gene 124028 125521 . + . ID=gene-O5C65_000940;Name=O5C65_000940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000940 DALFDA020000005.1 Protein Homology CDS 124028 125521 . + 0 ID=cds-HJH9171092.1;Parent=gene-O5C65_000940;Dbxref=NCBI_GP:HJH9171092.1;Name=HJH9171092.1;Ontology_term=GO:0006817,GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551775.1;locus_tag=O5C65_000940;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=HJH9171092.1;transl_table=11 DALFDA020000005.1 tpg gene 125531 126076 . + . ID=gene-O5C65_000941;Name=O5C65_000941;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000941 DALFDA020000005.1 Protein Homology CDS 125531 126076 . + 0 ID=cds-HJH9171093.1;Parent=gene-O5C65_000941;Dbxref=NCBI_GP:HJH9171093.1;Name=HJH9171093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462429.1;locus_tag=O5C65_000941;product=hypothetical protein;protein_id=HJH9171093.1;transl_table=11 DALFDA020000005.1 tpg gene 126123 127631 . - . ID=gene-O5C65_000942;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=O5C65_000942 DALFDA020000005.1 Protein Homology CDS 126123 127631 . - 0 ID=cds-HJH9171094.1;Parent=gene-O5C65_000942;Dbxref=NCBI_GP:HJH9171094.1;Name=HJH9171094.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462428.1;locus_tag=O5C65_000942;product=glycerol-3-phosphate dehydrogenase;protein_id=HJH9171094.1;transl_table=11 DALFDA020000005.1 tpg gene 127830 128156 . + . ID=gene-O5C65_000943;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=O5C65_000943 DALFDA020000005.1 Protein Homology CDS 127830 128156 . + 0 ID=cds-HJH9171095.1;Parent=gene-O5C65_000943;Dbxref=NCBI_GP:HJH9171095.1;Name=HJH9171095.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462427.1;locus_tag=O5C65_000943;product=thiosulfate sulfurtransferase GlpE;protein_id=HJH9171095.1;transl_table=11 DALFDA020000005.1 tpg gene 128232 129062 . + . ID=gene-O5C65_000944;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=O5C65_000944 DALFDA020000005.1 Protein Homology CDS 128232 129062 . + 0 ID=cds-HJH9171096.1;Parent=gene-O5C65_000944;Dbxref=NCBI_GP:HJH9171096.1;Name=HJH9171096.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462426.1;locus_tag=O5C65_000944;product=rhomboid family intramembrane serine protease GlpG;protein_id=HJH9171096.1;transl_table=11 DALFDA020000005.1 tpg gene 129156 129914 . + . ID=gene-O5C65_000945;Name=O5C65_000945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000945 DALFDA020000005.1 Protein Homology CDS 129156 129914 . + 0 ID=cds-HJH9171097.1;Parent=gene-O5C65_000945;Dbxref=NCBI_GP:HJH9171097.1;Name=HJH9171097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=O5C65_000945;product=DeoR/GlpR family transcriptional regulator;protein_id=HJH9171097.1;transl_table=11 DALFDA020000005.1 tpg gene 129911 131494 . - . ID=gene-O5C65_000946;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;locus_tag=O5C65_000946 DALFDA020000005.1 Protein Homology CDS 129911 131494 . - 0 ID=cds-HJH9171098.1;Parent=gene-O5C65_000946;Dbxref=NCBI_GP:HJH9171098.1;Name=HJH9171098.1;Ontology_term=GO:0006355,GO:0003700,GO:0005524,GO:0008134;gbkey=CDS;gene=rtcR;go_function=DNA-binding transcription factor activity|0003700||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462424.1;locus_tag=O5C65_000946;product=RNA repair transcriptional activator RtcR;protein_id=HJH9171098.1;transl_table=11 DALFDA020000005.1 tpg gene 131684 133237 . + . ID=gene-O5C65_000947;Name=O5C65_000947;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000947 DALFDA020000005.1 Protein Homology CDS 131684 133237 . + 0 ID=cds-HJH9171099.1;Parent=gene-O5C65_000947;Dbxref=NCBI_GP:HJH9171099.1;Name=HJH9171099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462423.1;locus_tag=O5C65_000947;product=vWA domain-containing protein;protein_id=HJH9171099.1;transl_table=11 DALFDA020000005.1 tpg gene 133585 134799 . + . ID=gene-O5C65_000948;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=protein_coding;locus_tag=O5C65_000948 DALFDA020000005.1 Protein Homology CDS 133585 134799 . + 0 ID=cds-HJH9171100.1;Parent=gene-O5C65_000948;Dbxref=NCBI_GP:HJH9171100.1;Name=HJH9171100.1;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417879.1;locus_tag=O5C65_000948;product=RNA-splicing ligase RtcB;protein_id=HJH9171100.1;transl_table=11 DALFDA020000005.1 tpg gene 134803 135837 . + . ID=gene-O5C65_000949;Name=rtcA;gbkey=Gene;gene=rtcA;gene_biotype=protein_coding;locus_tag=O5C65_000949 DALFDA020000005.1 Protein Homology CDS 134803 135837 . + 0 ID=cds-HJH9171101.1;Parent=gene-O5C65_000949;Dbxref=NCBI_GP:HJH9171101.1;Name=HJH9171101.1;Ontology_term=GO:0006396,GO:0003963;gbkey=CDS;gene=rtcA;go_function=RNA-3'-phosphate cyclase activity|0003963||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000101029.1;locus_tag=O5C65_000949;product=RNA 3'-terminal phosphate cyclase;protein_id=HJH9171101.1;transl_table=11 DALFDA020000005.1 tpg gene 135834 136394 . + . ID=gene-O5C65_000950;Name=O5C65_000950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000950 DALFDA020000005.1 Protein Homology CDS 135834 136394 . + 0 ID=cds-HJH9171102.1;Parent=gene-O5C65_000950;Dbxref=NCBI_GP:HJH9171102.1;Name=HJH9171102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001650910.1;locus_tag=O5C65_000950;product=hypothetical protein;protein_id=HJH9171102.1;transl_table=11 DALFDA020000005.1 tpg gene 136536 139241 . - . ID=gene-O5C65_000951;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=O5C65_000951 DALFDA020000005.1 Protein Homology CDS 136536 139241 . - 0 ID=cds-HJH9171103.1;Parent=gene-O5C65_000951;Dbxref=NCBI_GP:HJH9171103.1;Name=HJH9171103.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=O5C65_000951;product=HTH-type transcriptional regulator MalT;protein_id=HJH9171103.1;transl_table=11 DALFDA020000005.1 tpg gene 139836 142229 . + . ID=gene-O5C65_000952;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=O5C65_000952 DALFDA020000005.1 Protein Homology CDS 139836 142229 . + 0 ID=cds-HJH9171104.1;Parent=gene-O5C65_000952;Dbxref=NCBI_GP:HJH9171104.1;Name=HJH9171104.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462417.1;locus_tag=O5C65_000952;product=maltodextrin phosphorylase;protein_id=HJH9171104.1;transl_table=11 DALFDA020000005.1 tpg gene 142239 144317 . + . ID=gene-O5C65_000953;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=O5C65_000953 DALFDA020000005.1 Protein Homology CDS 142239 144317 . + 0 ID=cds-HJH9171105.1;Parent=gene-O5C65_000953;Dbxref=NCBI_GP:HJH9171105.1;Name=HJH9171105.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462416.1;locus_tag=O5C65_000953;product=4-alpha-glucanotransferase;protein_id=HJH9171105.1;transl_table=11 DALFDA020000005.1 tpg gene 144436 145752 . - . ID=gene-O5C65_000954;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=O5C65_000954 DALFDA020000005.1 Protein Homology CDS 144436 145752 . - 0 ID=cds-HJH9171106.1;Parent=gene-O5C65_000954;Dbxref=NCBI_GP:HJH9171106.1;Name=HJH9171106.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462415.1;locus_tag=O5C65_000954;product=gluconate transporter;protein_id=HJH9171106.1;transl_table=11 DALFDA020000005.1 tpg gene 146119 146694 . - . ID=gene-O5C65_000955;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=O5C65_000955 DALFDA020000005.1 Protein Homology CDS 146119 146694 . - 0 ID=cds-HJH9171107.1;Parent=gene-O5C65_000955;Dbxref=NCBI_GP:HJH9171107.1;Name=HJH9171107.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=O5C65_000955;product=Fe-S biogenesis protein NfuA;protein_id=HJH9171107.1;transl_table=11 DALFDA020000005.1 tpg gene 146753 147436 . - . ID=gene-O5C65_000956;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=O5C65_000956 DALFDA020000005.1 Protein Homology CDS 146753 147436 . - 0 ID=cds-HJH9171108.1;Parent=gene-O5C65_000956;Dbxref=NCBI_GP:HJH9171108.1;Name=HJH9171108.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462413.1;locus_tag=O5C65_000956;product=DNA utilization protein GntX;protein_id=HJH9171108.1;transl_table=11 DALFDA020000005.1 tpg gene 147474 148244 . + . ID=gene-O5C65_000957;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=O5C65_000957 DALFDA020000005.1 Protein Homology CDS 147474 148244 . + 0 ID=cds-HJH9171109.1;Parent=gene-O5C65_000957;Dbxref=NCBI_GP:HJH9171109.1;Name=HJH9171109.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462412.1;locus_tag=O5C65_000957;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=HJH9171109.1;transl_table=11 DALFDA020000005.1 tpg gene 148280 149194 . - . ID=gene-O5C65_000958;Name=O5C65_000958;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000958 DALFDA020000005.1 Protein Homology CDS 148280 149194 . - 0 ID=cds-HJH9171110.1;Parent=gene-O5C65_000958;Dbxref=NCBI_GP:HJH9171110.1;Name=HJH9171110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462411.1;locus_tag=O5C65_000958;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=HJH9171110.1;transl_table=11 DALFDA020000005.1 tpg gene 149429 149665 . - . ID=gene-O5C65_000959;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=O5C65_000959 DALFDA020000005.1 Protein Homology CDS 149429 149665 . - 0 ID=cds-HJH9171111.1;Parent=gene-O5C65_000959;Dbxref=NCBI_GP:HJH9171111.1;Name=HJH9171111.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462410.1;locus_tag=O5C65_000959;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=HJH9171111.1;transl_table=11 DALFDA020000005.1 tpg gene 149678 151996 . - . ID=gene-O5C65_000960;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=O5C65_000960 DALFDA020000005.1 Protein Homology CDS 149678 151996 . - 0 ID=cds-HJH9171112.1;Parent=gene-O5C65_000960;Dbxref=NCBI_GP:HJH9171112.1;Name=HJH9171112.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462409.1;locus_tag=O5C65_000960;product=Fe(2+) transporter permease subunit FeoB;protein_id=HJH9171112.1;transl_table=11 DALFDA020000005.1 tpg gene 152015 152242 . - . ID=gene-O5C65_000961;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=O5C65_000961 DALFDA020000005.1 Protein Homology CDS 152015 152242 . - 0 ID=cds-HJH9171113.1;Parent=gene-O5C65_000961;Dbxref=NCBI_GP:HJH9171113.1;Name=HJH9171113.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462408.1;locus_tag=O5C65_000961;product=ferrous iron transporter A;protein_id=HJH9171113.1;transl_table=11 DALFDA020000005.1 tpg gene 152679 155009 . - . ID=gene-O5C65_000962;Name=O5C65_000962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000962 DALFDA020000005.1 Protein Homology CDS 152679 155009 . - 0 ID=cds-HJH9171114.1;Parent=gene-O5C65_000962;Dbxref=NCBI_GP:HJH9171114.1;Name=HJH9171114.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312276.2;locus_tag=O5C65_000962;product=Tex family protein;protein_id=HJH9171114.1;transl_table=11 DALFDA020000005.1 tpg gene 155108 155581 . - . ID=gene-O5C65_000963;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=O5C65_000963 DALFDA020000005.1 Protein Homology CDS 155108 155581 . - 0 ID=cds-HJH9171115.1;Parent=gene-O5C65_000963;Dbxref=NCBI_GP:HJH9171115.1;Name=HJH9171115.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703675.1;locus_tag=O5C65_000963;product=transcription elongation factor GreB;protein_id=HJH9171115.1;transl_table=11 DALFDA020000005.1 tpg gene 155807 156526 . + . ID=gene-O5C65_000964;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=O5C65_000964 DALFDA020000005.1 Protein Homology CDS 155807 156526 . + 0 ID=cds-HJH9171116.1;Parent=gene-O5C65_000964;Dbxref=NCBI_GP:HJH9171116.1;Name=HJH9171116.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009204837.1;locus_tag=O5C65_000964;product=two-component system response regulator OmpR;protein_id=HJH9171116.1;transl_table=11 DALFDA020000005.1 tpg gene 156523 157875 . + . ID=gene-O5C65_000965;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=O5C65_000965 DALFDA020000005.1 Protein Homology CDS 156523 157875 . + 0 ID=cds-HJH9171117.1;Parent=gene-O5C65_000965;Dbxref=NCBI_GP:HJH9171117.1;Name=HJH9171117.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462404.1;locus_tag=O5C65_000965;product=two-component system sensor histidine kinase EnvZ;protein_id=HJH9171117.1;transl_table=11 DALFDA020000005.1 tpg gene 157950 159569 . - . ID=gene-O5C65_000966;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=O5C65_000966 DALFDA020000005.1 Protein Homology CDS 157950 159569 . - 0 ID=cds-HJH9171118.1;Parent=gene-O5C65_000966;Dbxref=NCBI_GP:HJH9171118.1;Name=HJH9171118.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462403.2;locus_tag=O5C65_000966;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=HJH9171118.1;transl_table=11 DALFDA020000005.1 tpg gene 159949 161658 . + . ID=gene-O5C65_000967;Name=O5C65_000967;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000967 DALFDA020000005.1 Protein Homology CDS 159949 161658 . + 0 ID=cds-HJH9171119.1;Parent=gene-O5C65_000967;Dbxref=NCBI_GP:HJH9171119.1;Name=HJH9171119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462402.1;locus_tag=O5C65_000967;product=DUF4153 domain-containing protein;protein_id=HJH9171119.1;transl_table=11 DALFDA020000005.1 tpg gene 161767 162645 . - . ID=gene-O5C65_000968;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=O5C65_000968 DALFDA020000005.1 Protein Homology CDS 161767 162645 . - 0 ID=cds-HJH9171120.1;Parent=gene-O5C65_000968;Dbxref=NCBI_GP:HJH9171120.1;Name=HJH9171120.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=O5C65_000968;product=Hsp33 family molecular chaperone HslO;protein_id=HJH9171120.1;transl_table=11 DALFDA020000005.1 tpg gene 162670 163071 . - . ID=gene-O5C65_000969;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=O5C65_000969 DALFDA020000005.1 Protein Homology CDS 162670 163071 . - 0 ID=cds-HJH9171121.1;Parent=gene-O5C65_000969;Dbxref=NCBI_GP:HJH9171121.1;Name=HJH9171121.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462400.1;locus_tag=O5C65_000969;product=ribosome-associated heat shock protein Hsp15;protein_id=HJH9171121.1;transl_table=11 DALFDA020000005.1 tpg gene 163082 163750 . - . ID=gene-O5C65_000970;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=O5C65_000970 DALFDA020000005.1 Protein Homology CDS 163082 163750 . - 0 ID=cds-HJH9171122.1;Parent=gene-O5C65_000970;Dbxref=NCBI_GP:HJH9171122.1;Name=HJH9171122.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462399.1;locus_tag=O5C65_000970;product=GMP/IMP nucleotidase;protein_id=HJH9171122.1;transl_table=11 DALFDA020000005.1 tpg gene 163815 165947 . - . ID=gene-O5C65_000971;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=O5C65_000971 DALFDA020000005.1 Protein Homology CDS 163815 165947 . - 0 ID=cds-HJH9171123.1;Parent=gene-O5C65_000971;Dbxref=NCBI_GP:HJH9171123.1;Name=HJH9171123.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462398.1;locus_tag=O5C65_000971;product=intracellular growth attenuator protein IgaA;protein_id=HJH9171123.1;transl_table=11 DALFDA020000005.1 tpg gene 166270 166833 . + . ID=gene-O5C65_000972;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=O5C65_000972 DALFDA020000005.1 Protein Homology CDS 166270 166833 . + 0 ID=cds-HJH9171124.1;Parent=gene-O5C65_000972;Dbxref=NCBI_GP:HJH9171124.1;Name=HJH9171124.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000045725.1;locus_tag=O5C65_000972;product=ADP compounds hydrolase NudE;protein_id=HJH9171124.1;transl_table=11 DALFDA020000005.1 tpg gene 166929 169481 . - . ID=gene-O5C65_000973;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=O5C65_000973 DALFDA020000005.1 Protein Homology CDS 166929 169481 . - 0 ID=cds-HJH9171125.1;Parent=gene-O5C65_000973;Dbxref=NCBI_GP:HJH9171125.1;Name=HJH9171125.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=O5C65_000973;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=HJH9171125.1;transl_table=11 DALFDA020000005.1 tpg gene 169602 170381 . + . ID=gene-O5C65_000974;Name=O5C65_000974;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000974 DALFDA020000005.1 Protein Homology CDS 169602 170381 . + 0 ID=cds-HJH9171126.1;Parent=gene-O5C65_000974;Dbxref=NCBI_GP:HJH9171126.1;Name=HJH9171126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462395.1;locus_tag=O5C65_000974;product=DNA utilization protein HofM;protein_id=HJH9171126.1;transl_table=11 DALFDA020000005.1 tpg gene 170381 170920 . + . ID=gene-O5C65_000975;Name=O5C65_000975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000975 DALFDA020000005.1 Protein Homology CDS 170381 170920 . + 0 ID=cds-HJH9171127.1;Parent=gene-O5C65_000975;Dbxref=NCBI_GP:HJH9171127.1;Name=HJH9171127.1;Ontology_term=GO:0043107,GO:0043683;gbkey=CDS;go_process=type IV pilus-dependent motility|0043107||IEA,type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462394.1;locus_tag=O5C65_000975;product=PilN domain-containing protein;protein_id=HJH9171127.1;transl_table=11 DALFDA020000005.1 tpg gene 170904 171377 . + . ID=gene-O5C65_000976;Name=O5C65_000976;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000976 DALFDA020000005.1 Protein Homology CDS 170904 171377 . + 0 ID=cds-HJH9171128.1;Parent=gene-O5C65_000976;Dbxref=NCBI_GP:HJH9171128.1;Name=HJH9171128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462393.1;locus_tag=O5C65_000976;product=hypothetical protein;protein_id=HJH9171128.1;transl_table=11 DALFDA020000005.1 tpg gene 171367 171768 . + . ID=gene-O5C65_000977;Name=O5C65_000977;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000977 DALFDA020000005.1 Protein Homology CDS 171367 171768 . + 0 ID=cds-HJH9171129.1;Parent=gene-O5C65_000977;Dbxref=NCBI_GP:HJH9171129.1;Name=HJH9171129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462392.1;locus_tag=O5C65_000977;product=HofP DNA utilization family protein;protein_id=HJH9171129.1;transl_table=11 DALFDA020000005.1 tpg gene 171683 172921 . + . ID=gene-O5C65_000978;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=O5C65_000978 DALFDA020000005.1 Protein Homology CDS 171683 172921 . + 0 ID=cds-HJH9171130.1;Parent=gene-O5C65_000978;Dbxref=NCBI_GP:HJH9171130.1;Name=HJH9171130.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462391.1;locus_tag=O5C65_000978;product=DNA uptake porin HofQ;protein_id=HJH9171130.1;transl_table=11 DALFDA020000005.1 tpg gene 173386 173907 . + . ID=gene-O5C65_000979;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=O5C65_000979 DALFDA020000005.1 Protein Homology CDS 173386 173907 . + 0 ID=cds-HJH9171131.1;Parent=gene-O5C65_000979;Dbxref=NCBI_GP:HJH9171131.1;Name=HJH9171131.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=O5C65_000979;product=shikimate kinase AroK;protein_id=HJH9171131.1;transl_table=11 DALFDA020000005.1 tpg gene 173964 175052 . + . ID=gene-O5C65_000980;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=O5C65_000980 DALFDA020000005.1 Protein Homology CDS 173964 175052 . + 0 ID=cds-HJH9171132.1;Parent=gene-O5C65_000980;Dbxref=NCBI_GP:HJH9171132.1;Name=HJH9171132.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462389.1;locus_tag=O5C65_000980;product=3-dehydroquinate synthase;protein_id=HJH9171132.1;transl_table=11 DALFDA020000005.1 tpg gene 175150 176427 . + . ID=gene-O5C65_000981;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=O5C65_000981 DALFDA020000005.1 Protein Homology CDS 175150 176427 . + 0 ID=cds-HJH9171133.1;Parent=gene-O5C65_000981;Dbxref=NCBI_GP:HJH9171133.1;Name=HJH9171133.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462388.1;locus_tag=O5C65_000981;product=cell division protein DamX;protein_id=HJH9171133.1;transl_table=11 DALFDA020000005.1 tpg gene 176608 177444 . + . ID=gene-O5C65_000982;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=O5C65_000982 DALFDA020000005.1 Protein Homology CDS 176608 177444 . + 0 ID=cds-HJH9171134.1;Parent=gene-O5C65_000982;Dbxref=NCBI_GP:HJH9171134.1;Name=HJH9171134.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462387.1;locus_tag=O5C65_000982;product=adenine-specific DNA-methyltransferase;protein_id=HJH9171134.1;transl_table=11 DALFDA020000005.1 tpg gene 177462 178139 . + . ID=gene-O5C65_000983;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=O5C65_000983 DALFDA020000005.1 Protein Homology CDS 177462 178139 . + 0 ID=cds-HJH9171135.1;Parent=gene-O5C65_000983;Dbxref=NCBI_GP:HJH9171135.1;Name=HJH9171135.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462386.1;locus_tag=O5C65_000983;product=ribulose-phosphate 3-epimerase;protein_id=HJH9171135.1;transl_table=11 DALFDA020000005.1 tpg gene 178132 178890 . + . ID=gene-O5C65_000984;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=O5C65_000984 DALFDA020000005.1 Protein Homology CDS 178132 178890 . + 0 ID=cds-HJH9171136.1;Parent=gene-O5C65_000984;Dbxref=NCBI_GP:HJH9171136.1;Name=HJH9171136.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462385.1;locus_tag=O5C65_000984;product=phosphoglycolate phosphatase;protein_id=HJH9171136.1;transl_table=11 DALFDA020000005.1 tpg gene 178883 179887 . + . ID=gene-O5C65_000985;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=O5C65_000985 DALFDA020000005.1 Protein Homology CDS 178883 179887 . + 0 ID=cds-HJH9171137.1;Parent=gene-O5C65_000985;Dbxref=NCBI_GP:HJH9171137.1;Name=HJH9171137.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462384.1;locus_tag=O5C65_000985;product=tryptophan--tRNA ligase;protein_id=HJH9171137.1;transl_table=11 DALFDA020000005.1 tpg gene 180032 180202 . - . ID=gene-O5C65_000986;Name=O5C65_000986;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000986 DALFDA020000005.1 Protein Homology CDS 180032 180202 . - 0 ID=cds-HJH9171138.1;Parent=gene-O5C65_000986;Dbxref=NCBI_GP:HJH9171138.1;Name=HJH9171138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462383.1;locus_tag=O5C65_000986;product=YhfL family protein;protein_id=HJH9171138.1;transl_table=11 DALFDA020000005.1 tpg gene 180395 185634 . - . ID=gene-O5C65_000987;Name=O5C65_000987;end_range=185634,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000987;partial=true DALFDA020000005.1 Protein Homology CDS 180395 185634 . - 2 ID=cds-HJH9171139.1;Parent=gene-O5C65_000987;Dbxref=NCBI_GP:HJH9171139.1;Name=HJH9171139.1;end_range=185634,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747946.1;locus_tag=O5C65_000987;partial=true;product=autotransporter adhesin BigA;protein_id=HJH9171139.1;transl_table=11 ##sequence-region DALFDA020000006.1 1 182178 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000006.1 tpg region 1 182178 . + . ID=DALFDA020000006.1:1..182178;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000006.1 tpg gene 173 2437 . + . ID=gene-O5C65_000988;Name=O5C65_000988;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000988 DALFDA020000006.1 Protein Homology CDS 173 2437 . + 0 ID=cds-HJH9171140.1;Parent=gene-O5C65_000988;Dbxref=NCBI_GP:HJH9171140.1;Name=HJH9171140.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459958.1;locus_tag=O5C65_000988;product=ComEC family protein;protein_id=HJH9171140.1;transl_table=11 DALFDA020000006.1 tpg gene 2474 4222 . + . ID=gene-O5C65_000989;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=O5C65_000989 DALFDA020000006.1 Protein Homology CDS 2474 4222 . + 0 ID=cds-HJH9171141.1;Parent=gene-O5C65_000989;Dbxref=NCBI_GP:HJH9171141.1;Name=HJH9171141.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459959.1;locus_tag=O5C65_000989;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=HJH9171141.1;transl_table=11 DALFDA020000006.1 tpg gene 4219 5196 . + . ID=gene-O5C65_000990;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=O5C65_000990 DALFDA020000006.1 Protein Homology CDS 4219 5196 . + 0 ID=cds-HJH9171142.1;Parent=gene-O5C65_000990;Dbxref=NCBI_GP:HJH9171142.1;Name=HJH9171142.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459960.1;locus_tag=O5C65_000990;product=tetraacyldisaccharide 4'-kinase;protein_id=HJH9171142.1;transl_table=11 DALFDA020000006.1 tpg gene 5240 6472 . + . ID=gene-O5C65_000991;Name=O5C65_000991;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000991 DALFDA020000006.1 Protein Homology CDS 5240 6472 . + 0 ID=cds-HJH9171143.1;Parent=gene-O5C65_000991;Dbxref=NCBI_GP:HJH9171143.1;Name=HJH9171143.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459961.1;locus_tag=O5C65_000991;product=winged helix-turn-helix domain-containing protein;protein_id=HJH9171143.1;transl_table=11 DALFDA020000006.1 tpg gene 6524 6706 . + . ID=gene-O5C65_000992;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=O5C65_000992 DALFDA020000006.1 Protein Homology CDS 6524 6706 . + 0 ID=cds-HJH9171144.1;Parent=gene-O5C65_000992;Dbxref=NCBI_GP:HJH9171144.1;Name=HJH9171144.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459962.1;locus_tag=O5C65_000992;product=protein YcaR;protein_id=HJH9171144.1;transl_table=11 DALFDA020000006.1 tpg gene 6703 7449 . + . ID=gene-O5C65_000993;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=O5C65_000993 DALFDA020000006.1 Protein Homology CDS 6703 7449 . + 0 ID=cds-HJH9171145.1;Parent=gene-O5C65_000993;Dbxref=NCBI_GP:HJH9171145.1;Name=HJH9171145.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459963.1;locus_tag=O5C65_000993;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=HJH9171145.1;transl_table=11 DALFDA020000006.1 tpg gene 7660 8553 . + . ID=gene-O5C65_000994;Name=O5C65_000994;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_000994 DALFDA020000006.1 Protein Homology CDS 7660 8553 . + 0 ID=cds-HJH9171146.1;Parent=gene-O5C65_000994;Dbxref=NCBI_GP:HJH9171146.1;Name=HJH9171146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459964.1;locus_tag=O5C65_000994;product=YcbJ family phosphotransferase;protein_id=HJH9171146.1;transl_table=11 DALFDA020000006.1 tpg gene 8533 9309 . - . ID=gene-O5C65_000995;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=O5C65_000995 DALFDA020000006.1 Protein Homology CDS 8533 9309 . - 0 ID=cds-HJH9171147.1;Parent=gene-O5C65_000995;Dbxref=NCBI_GP:HJH9171147.1;Name=HJH9171147.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459965.1;locus_tag=O5C65_000995;product=envelope biogenesis factor ElyC;protein_id=HJH9171147.1;transl_table=11 DALFDA020000006.1 tpg gene 9445 10248 . + . ID=gene-O5C65_000996;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=O5C65_000996 DALFDA020000006.1 Protein Homology CDS 9445 10248 . + 0 ID=cds-HJH9171148.1;Parent=gene-O5C65_000996;Dbxref=NCBI_GP:HJH9171148.1;Name=HJH9171148.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459966.1;locus_tag=O5C65_000996;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=HJH9171148.1;transl_table=11 DALFDA020000006.1 tpg gene 10241 11563 . + . ID=gene-O5C65_000997;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=O5C65_000997 DALFDA020000006.1 Protein Homology CDS 10241 11563 . + 0 ID=cds-HJH9171149.1;Parent=gene-O5C65_000997;Dbxref=NCBI_GP:HJH9171149.1;Name=HJH9171149.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=O5C65_000997;product=chromosome partition protein MukF;protein_id=HJH9171149.1;transl_table=11 DALFDA020000006.1 tpg gene 11544 12248 . + . ID=gene-O5C65_000998;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=O5C65_000998 DALFDA020000006.1 Protein Homology CDS 11544 12248 . + 0 ID=cds-HJH9171150.1;Parent=gene-O5C65_000998;Dbxref=NCBI_GP:HJH9171150.1;Name=HJH9171150.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459968.1;locus_tag=O5C65_000998;product=chromosome partition protein MukE;protein_id=HJH9171150.1;transl_table=11 DALFDA020000006.1 tpg gene 12248 16714 . + . ID=gene-O5C65_000999;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=O5C65_000999 DALFDA020000006.1 Protein Homology CDS 12248 16714 . + 0 ID=cds-HJH9171151.1;Parent=gene-O5C65_000999;Dbxref=NCBI_GP:HJH9171151.1;Name=HJH9171151.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459969.1;locus_tag=O5C65_000999;product=chromosome partition protein MukB;protein_id=HJH9171151.1;transl_table=11 DALFDA020000006.1 tpg gene 17059 18906 . + . ID=gene-O5C65_001000;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=O5C65_001000 DALFDA020000006.1 Protein Homology CDS 17059 18906 . + 0 ID=cds-HJH9171152.1;Parent=gene-O5C65_001000;Dbxref=NCBI_GP:HJH9171152.1;Name=HJH9171152.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459970.1;locus_tag=O5C65_001000;product=L%2CD-transpeptidase;protein_id=HJH9171152.1;transl_table=11 DALFDA020000006.1 tpg gene 19166 19714 . + . ID=gene-O5C65_001001;Name=O5C65_001001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001001 DALFDA020000006.1 Protein Homology CDS 19166 19714 . + 0 ID=cds-HJH9171153.1;Parent=gene-O5C65_001001;Dbxref=NCBI_GP:HJH9171153.1;Name=HJH9171153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459971.1;locus_tag=O5C65_001001;product=DUF882 domain-containing protein;protein_id=HJH9171153.1;transl_table=11 DALFDA020000006.1 tpg gene 19742 20389 . + . ID=gene-O5C65_001002;Name=O5C65_001002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001002 DALFDA020000006.1 Protein Homology CDS 19742 20389 . + 0 ID=cds-HJH9171154.1;Parent=gene-O5C65_001002;Dbxref=NCBI_GP:HJH9171154.1;Name=HJH9171154.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=O5C65_001002;product=MBL fold metallo-hydrolase;protein_id=HJH9171154.1;transl_table=11 DALFDA020000006.1 tpg gene 20451 21641 . - . ID=gene-O5C65_001003;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=O5C65_001003 DALFDA020000006.1 Protein Homology CDS 20451 21641 . - 0 ID=cds-HJH9171155.1;Parent=gene-O5C65_001003;Dbxref=NCBI_GP:HJH9171155.1;Name=HJH9171155.1;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=O5C65_001003;product=aspartate transaminase;protein_id=HJH9171155.1;transl_table=11 DALFDA020000006.1 tpg gene 21826 22917 . - . ID=gene-O5C65_001004;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=O5C65_001004 DALFDA020000006.1 Protein Homology CDS 21826 22917 . - 0 ID=cds-HJH9171156.1;Parent=gene-O5C65_001004;Dbxref=NCBI_GP:HJH9171156.1;Name=HJH9171156.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459974.1;locus_tag=O5C65_001004;product=porin OmpF;protein_id=HJH9171156.1;transl_table=11 DALFDA020000006.1 tpg gene 23523 24923 . - . ID=gene-O5C65_001005;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=O5C65_001005 DALFDA020000006.1 Protein Homology CDS 23523 24923 . - 0 ID=cds-HJH9171157.1;Parent=gene-O5C65_001005;Dbxref=NCBI_GP:HJH9171157.1;Name=HJH9171157.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=O5C65_001005;product=asparagine--tRNA ligase;protein_id=HJH9171157.1;transl_table=11 DALFDA020000006.1 tpg gene 25124 25585 . - . ID=gene-O5C65_001006;Name=O5C65_001006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001006 DALFDA020000006.1 Protein Homology CDS 25124 25585 . - 0 ID=cds-HJH9171158.1;Parent=gene-O5C65_001006;Dbxref=NCBI_GP:HJH9171158.1;Name=HJH9171158.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459976.1;locus_tag=O5C65_001006;product=Lrp/AsnC family transcriptional regulator;protein_id=HJH9171158.1;transl_table=11 DALFDA020000006.1 tpg gene 25903 27117 . + . ID=gene-O5C65_001007;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=O5C65_001007 DALFDA020000006.1 Protein Homology CDS 25903 27117 . + 0 ID=cds-HJH9171159.1;Parent=gene-O5C65_001007;Dbxref=NCBI_GP:HJH9171159.1;Name=HJH9171159.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459977.1;locus_tag=O5C65_001007;product=diaminopropionate ammonia-lyase;protein_id=HJH9171159.1;transl_table=11 DALFDA020000006.1 tpg gene 27363 28796 . + . ID=gene-O5C65_001008;Name=O5C65_001008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001008 DALFDA020000006.1 Protein Homology CDS 27363 28796 . + 0 ID=cds-HJH9171160.1;Parent=gene-O5C65_001008;Dbxref=NCBI_GP:HJH9171160.1;Name=HJH9171160.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524705.1;locus_tag=O5C65_001008;product=alanine/glycine:cation symporter family protein;protein_id=HJH9171160.1;transl_table=11 DALFDA020000006.1 tpg gene 28877 30079 . - . ID=gene-O5C65_001009;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=O5C65_001009 DALFDA020000006.1 Protein Homology CDS 28877 30079 . - 0 ID=cds-HJH9171161.1;Parent=gene-O5C65_001009;Dbxref=NCBI_GP:HJH9171161.1;Name=HJH9171161.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459979.1;locus_tag=O5C65_001009;product=nicotinate phosphoribosyltransferase;protein_id=HJH9171161.1;transl_table=11 DALFDA020000006.1 tpg gene 30346 32958 . + . ID=gene-O5C65_001010;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=O5C65_001010 DALFDA020000006.1 Protein Homology CDS 30346 32958 . + 0 ID=cds-HJH9171162.1;Parent=gene-O5C65_001010;Dbxref=NCBI_GP:HJH9171162.1;Name=HJH9171162.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=O5C65_001010;product=aminopeptidase N;protein_id=HJH9171162.1;transl_table=11 DALFDA020000006.1 tpg gene 33166 34176 . + . ID=gene-O5C65_001011;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=O5C65_001011 DALFDA020000006.1 Protein Homology CDS 33166 34176 . + 0 ID=cds-HJH9171163.1;Parent=gene-O5C65_001011;Dbxref=NCBI_GP:HJH9171163.1;Name=HJH9171163.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460032.1;locus_tag=O5C65_001011;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=HJH9171163.1;transl_table=11 DALFDA020000006.1 tpg gene 34342 34884 . + . ID=gene-O5C65_001012;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=O5C65_001012 DALFDA020000006.1 Protein Homology CDS 34342 34884 . + 0 ID=cds-HJH9171164.1;Parent=gene-O5C65_001012;Dbxref=NCBI_GP:HJH9171164.1;Name=HJH9171164.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460033.1;locus_tag=O5C65_001012;product=cell division protein ZapC;protein_id=HJH9171164.1;transl_table=11 DALFDA020000006.1 tpg gene 34881 35990 . - . ID=gene-O5C65_001013;Name=O5C65_001013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001013 DALFDA020000006.1 Protein Homology CDS 34881 35990 . - 0 ID=cds-HJH9171165.1;Parent=gene-O5C65_001013;Dbxref=NCBI_GP:HJH9171165.1;Name=HJH9171165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460034.1;locus_tag=O5C65_001013;product=YcbX family protein;protein_id=HJH9171165.1;transl_table=11 DALFDA020000006.1 tpg gene 36089 38197 . + . ID=gene-O5C65_001014;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=O5C65_001014 DALFDA020000006.1 Protein Homology CDS 36089 38197 . + 0 ID=cds-HJH9171166.1;Parent=gene-O5C65_001014;Dbxref=NCBI_GP:HJH9171166.1;Name=HJH9171166.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460035.1;locus_tag=O5C65_001014;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=HJH9171166.1;transl_table=11 DALFDA020000006.1 tpg gene 38210 40117 . + . ID=gene-O5C65_001015;Name=O5C65_001015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001015 DALFDA020000006.1 Protein Homology CDS 38210 40117 . + 0 ID=cds-HJH9171167.1;Parent=gene-O5C65_001015;Dbxref=NCBI_GP:HJH9171167.1;Name=HJH9171167.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=O5C65_001015;product=ABC transporter ATP-binding protein;protein_id=HJH9171167.1;transl_table=11 DALFDA020000006.1 tpg gene 40132 41385 . + . ID=gene-O5C65_001016;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=O5C65_001016 DALFDA020000006.1 Protein Homology CDS 40132 41385 . + 0 ID=cds-HJH9171168.1;Parent=gene-O5C65_001016;Dbxref=NCBI_GP:HJH9171168.1;Name=HJH9171168.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460037.1;locus_tag=O5C65_001016;product=membrane integrity-associated transporter subunit PqiA;protein_id=HJH9171168.1;transl_table=11 DALFDA020000006.1 tpg gene 41390 43030 . + . ID=gene-O5C65_001017;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=O5C65_001017 DALFDA020000006.1 Protein Homology CDS 41390 43030 . + 0 ID=cds-HJH9171169.1;Parent=gene-O5C65_001017;Dbxref=NCBI_GP:HJH9171169.1;Name=HJH9171169.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460038.1;locus_tag=O5C65_001017;product=intermembrane transport protein PqiB;protein_id=HJH9171169.1;transl_table=11 DALFDA020000006.1 tpg gene 43027 43590 . + . ID=gene-O5C65_001018;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=O5C65_001018 DALFDA020000006.1 Protein Homology CDS 43027 43590 . + 0 ID=cds-HJH9171170.1;Parent=gene-O5C65_001018;Dbxref=NCBI_GP:HJH9171170.1;Name=HJH9171170.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460039.1;locus_tag=O5C65_001018;product=membrane integrity-associated transporter subunit PqiC;protein_id=HJH9171170.1;transl_table=11 DALFDA020000006.1 tpg gene 43846 44013 . + . ID=gene-O5C65_001019;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=O5C65_001019 DALFDA020000006.1 Protein Homology CDS 43846 44013 . + 0 ID=cds-HJH9171171.1;Parent=gene-O5C65_001019;Dbxref=NCBI_GP:HJH9171171.1;Name=HJH9171171.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460040.1;locus_tag=O5C65_001019;product=ribosome modulation factor;protein_id=HJH9171171.1;transl_table=11 DALFDA020000006.1 tpg gene 44113 44631 . - . ID=gene-O5C65_001020;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=O5C65_001020 DALFDA020000006.1 Protein Homology CDS 44113 44631 . - 0 ID=cds-HJH9171172.1;Parent=gene-O5C65_001020;Dbxref=NCBI_GP:HJH9171172.1;Name=HJH9171172.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=O5C65_001020;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=HJH9171172.1;transl_table=11 DALFDA020000006.1 tpg gene 44700 46460 . - . ID=gene-O5C65_001021;Name=O5C65_001021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001021 DALFDA020000006.1 Protein Homology CDS 44700 46460 . - 0 ID=cds-HJH9171173.1;Parent=gene-O5C65_001021;Dbxref=NCBI_GP:HJH9171173.1;Name=HJH9171173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460042.1;locus_tag=O5C65_001021;product=AAA family ATPase;protein_id=HJH9171173.1;transl_table=11 DALFDA020000006.1 tpg gene 46646 47098 . + . ID=gene-O5C65_001022;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=O5C65_001022 DALFDA020000006.1 Protein Homology CDS 46646 47098 . + 0 ID=cds-HJH9171174.1;Parent=gene-O5C65_001022;Dbxref=NCBI_GP:HJH9171174.1;Name=HJH9171174.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460043.1;locus_tag=O5C65_001022;product=macrodomain Ter protein MatP;protein_id=HJH9171174.1;transl_table=11 DALFDA020000006.1 tpg gene 47170 48222 . - . ID=gene-O5C65_001023;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=O5C65_001023 DALFDA020000006.1 Protein Homology CDS 47170 48222 . - 0 ID=cds-HJH9171175.1;Parent=gene-O5C65_001023;Dbxref=NCBI_GP:HJH9171175.1;Name=HJH9171175.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460044.1;locus_tag=O5C65_001023;product=porin OmpA;protein_id=HJH9171175.1;transl_table=11 DALFDA020000006.1 tpg gene 48579 49088 . - . ID=gene-O5C65_001024;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=O5C65_001024 DALFDA020000006.1 Protein Homology CDS 48579 49088 . - 0 ID=cds-HJH9171176.1;Parent=gene-O5C65_001024;Dbxref=NCBI_GP:HJH9171176.1;Name=HJH9171176.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460045.1;locus_tag=O5C65_001024;product=SOS-induced cell division inhibitor SulA;protein_id=HJH9171176.1;transl_table=11 DALFDA020000006.1 tpg gene 49305 49910 . + . ID=gene-O5C65_001025;Name=O5C65_001025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001025 DALFDA020000006.1 Protein Homology CDS 49305 49910 . + 0 ID=cds-HJH9171177.1;Parent=gene-O5C65_001025;Dbxref=NCBI_GP:HJH9171177.1;Name=HJH9171177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460046.1;locus_tag=O5C65_001025;product=TfoX/Sxy family DNA transformation protein;protein_id=HJH9171177.1;transl_table=11 DALFDA020000006.1 tpg gene 49897 52050 . - . ID=gene-O5C65_001026;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=O5C65_001026 DALFDA020000006.1 Protein Homology CDS 49897 52050 . - 0 ID=cds-HJH9171178.1;Parent=gene-O5C65_001026;Dbxref=NCBI_GP:HJH9171178.1;Name=HJH9171178.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460047.1;locus_tag=O5C65_001026;product=YccS family putative transporter;protein_id=HJH9171178.1;transl_table=11 DALFDA020000006.1 tpg gene 52069 52515 . - . ID=gene-O5C65_001027;Name=O5C65_001027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001027 DALFDA020000006.1 Protein Homology CDS 52069 52515 . - 0 ID=cds-HJH9171179.1;Parent=gene-O5C65_001027;Dbxref=NCBI_GP:HJH9171179.1;Name=HJH9171179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460048.1;locus_tag=O5C65_001027;product=YccF domain-containing protein;protein_id=HJH9171179.1;transl_table=11 DALFDA020000006.1 tpg gene 52639 54693 . + . ID=gene-O5C65_001028;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=O5C65_001028 DALFDA020000006.1 Protein Homology CDS 52639 54693 . + 0 ID=cds-HJH9171180.1;Parent=gene-O5C65_001028;Dbxref=NCBI_GP:HJH9171180.1;Name=HJH9171180.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460049.1;locus_tag=O5C65_001028;product=DNA helicase IV;protein_id=HJH9171180.1;transl_table=11 DALFDA020000006.1 tpg gene 54729 55187 . - . ID=gene-O5C65_001029;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=O5C65_001029 DALFDA020000006.1 Protein Homology CDS 54729 55187 . - 0 ID=cds-HJH9171181.1;Parent=gene-O5C65_001029;Dbxref=NCBI_GP:HJH9171181.1;Name=HJH9171181.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460050.1;locus_tag=O5C65_001029;product=methylglyoxal synthase;protein_id=HJH9171181.1;transl_table=11 DALFDA020000006.1 tpg gene 55282 55944 . - . ID=gene-O5C65_001030;Name=O5C65_001030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001030 DALFDA020000006.1 Protein Homology CDS 55282 55944 . - 0 ID=cds-HJH9171182.1;Parent=gene-O5C65_001030;Dbxref=NCBI_GP:HJH9171182.1;Name=HJH9171182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460051.1;locus_tag=O5C65_001030;product=DUF2057 family protein;protein_id=HJH9171182.1;transl_table=11 DALFDA020000006.1 tpg gene 56118 56531 . + . ID=gene-O5C65_001031;Name=O5C65_001031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001031 DALFDA020000006.1 Protein Homology CDS 56118 56531 . + 0 ID=cds-HJH9171183.1;Parent=gene-O5C65_001031;Dbxref=NCBI_GP:HJH9171183.1;Name=HJH9171183.1;Ontology_term=GO:0120225;gbkey=CDS;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309076.1;locus_tag=O5C65_001031;product=CoA-binding protein;protein_id=HJH9171183.1;transl_table=11 DALFDA020000006.1 tpg gene 56576 56893 . - . ID=gene-O5C65_001032;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=O5C65_001032 DALFDA020000006.1 Protein Homology CDS 56576 56893 . - 0 ID=cds-HJH9171184.1;Parent=gene-O5C65_001032;Dbxref=NCBI_GP:HJH9171184.1;Name=HJH9171184.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=O5C65_001032;product=heat shock protein HspQ;protein_id=HJH9171184.1;transl_table=11 DALFDA020000006.1 tpg gene 56951 58162 . - . ID=gene-O5C65_001033;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=O5C65_001033 DALFDA020000006.1 Protein Homology CDS 56951 58162 . - 0 ID=cds-HJH9171185.1;Parent=gene-O5C65_001033;Dbxref=NCBI_GP:HJH9171185.1;Name=HJH9171185.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460054.1;locus_tag=O5C65_001033;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=HJH9171185.1;transl_table=11 DALFDA020000006.1 tpg gene 58377 58925 . + . ID=gene-O5C65_001034;Name=O5C65_001034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001034 DALFDA020000006.1 Protein Homology CDS 58377 58925 . + 0 ID=cds-HJH9171186.1;Parent=gene-O5C65_001034;Dbxref=NCBI_GP:HJH9171186.1;Name=HJH9171186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460055.1;locus_tag=O5C65_001034;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=HJH9171186.1;transl_table=11 DALFDA020000006.1 tpg gene 58951 59730 . + . ID=gene-O5C65_001035;Name=O5C65_001035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001035 DALFDA020000006.1 Protein Homology CDS 58951 59730 . + 0 ID=cds-HJH9171187.1;Parent=gene-O5C65_001035;Dbxref=NCBI_GP:HJH9171187.1;Name=HJH9171187.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460056.1;locus_tag=O5C65_001035;product=helix-turn-helix transcriptional regulator;protein_id=HJH9171187.1;transl_table=11 DALFDA020000006.1 tpg gene 59779 60060 . + . ID=gene-O5C65_001036;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=O5C65_001036 DALFDA020000006.1 Protein Homology CDS 59779 60060 . + 0 ID=cds-HJH9171188.1;Parent=gene-O5C65_001036;Dbxref=NCBI_GP:HJH9171188.1;Name=HJH9171188.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460057.1;locus_tag=O5C65_001036;product=acylphosphatase;protein_id=HJH9171188.1;transl_table=11 DALFDA020000006.1 tpg gene 60057 60386 . - . ID=gene-O5C65_001037;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=O5C65_001037 DALFDA020000006.1 Protein Homology CDS 60057 60386 . - 0 ID=cds-HJH9171189.1;Parent=gene-O5C65_001037;Dbxref=NCBI_GP:HJH9171189.1;Name=HJH9171189.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460058.1;locus_tag=O5C65_001037;product=sulfurtransferase TusE;protein_id=HJH9171189.1;transl_table=11 DALFDA020000006.1 tpg gene 60473 61132 . - . ID=gene-O5C65_001038;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=O5C65_001038 DALFDA020000006.1 Protein Homology CDS 60473 61132 . - 0 ID=cds-HJH9171190.1;Parent=gene-O5C65_001038;Dbxref=NCBI_GP:HJH9171190.1;Name=HJH9171190.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=O5C65_001038;product=FtsH protease modulator YccA;protein_id=HJH9171190.1;transl_table=11 DALFDA020000006.1 tpg gene 61527 61614 . + . ID=gene-O5C65_001039;Name=O5C65_001039;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_001039 DALFDA020000006.1 tRNAscan-SE tRNA 61527 61614 . + . ID=rna-O5C65_001039;Parent=gene-O5C65_001039;anticodon=(pos:61561..61563);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_001039;product=tRNA-Ser DALFDA020000006.1 tRNAscan-SE exon 61527 61614 . + . ID=exon-O5C65_001039-1;Parent=rna-O5C65_001039;anticodon=(pos:61561..61563);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_001039;product=tRNA-Ser DALFDA020000006.1 tpg gene 61683 62711 . - . ID=gene-O5C65_001040;Name=O5C65_001040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001040 DALFDA020000006.1 Protein Homology CDS 61683 62711 . - 0 ID=cds-HJH9171191.1;Parent=gene-O5C65_001040;Dbxref=NCBI_GP:HJH9171191.1;Name=HJH9171191.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240694.1;locus_tag=O5C65_001040;product=tyrosine-type recombinase/integrase;protein_id=HJH9171191.1;transl_table=11 DALFDA020000006.1 tpg gene 62711 62917 . - . ID=gene-O5C65_001041;Name=O5C65_001041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001041 DALFDA020000006.1 Protein Homology CDS 62711 62917 . - 0 ID=cds-HJH9171192.1;Parent=gene-O5C65_001041;Dbxref=NCBI_GP:HJH9171192.1;Name=HJH9171192.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025352.6;locus_tag=O5C65_001041;product=DUF4224 domain-containing protein;protein_id=HJH9171192.1;transl_table=11 DALFDA020000006.1 tpg gene 62932 63498 . - . ID=gene-O5C65_001042;Name=O5C65_001042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001042 DALFDA020000006.1 Protein Homology CDS 62932 63498 . - 0 ID=cds-HJH9171193.1;Parent=gene-O5C65_001042;Dbxref=NCBI_GP:HJH9171193.1;Name=HJH9171193.1;Ontology_term=GO:0009307,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660128.1;locus_tag=O5C65_001042;product=phage N-6-adenine-methyltransferase;protein_id=HJH9171193.1;transl_table=11 DALFDA020000006.1 tpg gene 63491 64210 . - . ID=gene-O5C65_001043;Name=O5C65_001043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001043 DALFDA020000006.1 Protein Homology CDS 63491 64210 . - 0 ID=cds-HJH9171194.1;Parent=gene-O5C65_001043;Dbxref=NCBI_GP:HJH9171194.1;Name=HJH9171194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034220.1;locus_tag=O5C65_001043;product=ead/Ea22-like family protein;protein_id=HJH9171194.1;transl_table=11 DALFDA020000006.1 tpg gene 64207 64680 . - . ID=gene-O5C65_001044;Name=O5C65_001044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001044 DALFDA020000006.1 Protein Homology CDS 64207 64680 . - 0 ID=cds-HJH9171195.1;Parent=gene-O5C65_001044;Dbxref=NCBI_GP:HJH9171195.1;Name=HJH9171195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000665853.1;locus_tag=O5C65_001044;product=hypothetical protein;protein_id=HJH9171195.1;transl_table=11 DALFDA020000006.1 tpg gene 64677 64919 . - . ID=gene-O5C65_001045;Name=O5C65_001045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001045 DALFDA020000006.1 Protein Homology CDS 64677 64919 . - 0 ID=cds-HJH9171196.1;Parent=gene-O5C65_001045;Dbxref=NCBI_GP:HJH9171196.1;Name=HJH9171196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000008825.1;locus_tag=O5C65_001045;product=ANR family transcriptional regulator;protein_id=HJH9171196.1;transl_table=11 DALFDA020000006.1 tpg gene 65021 65326 . - . ID=gene-O5C65_001046;Name=O5C65_001046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001046 DALFDA020000006.1 GeneMarkS-2+ CDS 65021 65326 . - 0 ID=cds-HJH9171197.1;Parent=gene-O5C65_001046;Dbxref=NCBI_GP:HJH9171197.1;Name=HJH9171197.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_001046;product=hypothetical protein;protein_id=HJH9171197.1;transl_table=11 DALFDA020000006.1 tpg gene 65371 66192 . - . ID=gene-O5C65_001047;Name=O5C65_001047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001047 DALFDA020000006.1 Protein Homology CDS 65371 66192 . - 0 ID=cds-HJH9171198.1;Parent=gene-O5C65_001047;Dbxref=NCBI_GP:HJH9171198.1;Name=HJH9171198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813840.1;locus_tag=O5C65_001047;product=YfdQ family protein;protein_id=HJH9171198.1;transl_table=11 DALFDA020000006.1 tpg gene 66251 66607 . - . ID=gene-O5C65_001048;Name=O5C65_001048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001048 DALFDA020000006.1 Protein Homology CDS 66251 66607 . - 0 ID=cds-HJH9171199.1;Parent=gene-O5C65_001048;Dbxref=NCBI_GP:HJH9171199.1;Name=HJH9171199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001071603.1;locus_tag=O5C65_001048;product=hypothetical protein;protein_id=HJH9171199.1;transl_table=11 DALFDA020000006.1 tpg gene 66588 67676 . - . ID=gene-O5C65_001049;Name=O5C65_001049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001049 DALFDA020000006.1 Protein Homology CDS 66588 67676 . - 0 ID=cds-HJH9171200.1;Parent=gene-O5C65_001049;Dbxref=NCBI_GP:HJH9171200.1;Name=HJH9171200.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024870.6;locus_tag=O5C65_001049;product=AAA family ATPase;protein_id=HJH9171200.1;transl_table=11 DALFDA020000006.1 tpg gene 67730 68110 . - . ID=gene-O5C65_001050;Name=O5C65_001050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001050 DALFDA020000006.1 GeneMarkS-2+ CDS 67730 68110 . - 0 ID=cds-HJH9171201.1;Parent=gene-O5C65_001050;Dbxref=NCBI_GP:HJH9171201.1;Name=HJH9171201.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_001050;product=hypothetical protein;protein_id=HJH9171201.1;transl_table=11 DALFDA020000006.1 tpg gene 68250 68609 . - . ID=gene-O5C65_001051;Name=O5C65_001051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001051 DALFDA020000006.1 GeneMarkS-2+ CDS 68250 68609 . - 0 ID=cds-HJH9171202.1;Parent=gene-O5C65_001051;Dbxref=NCBI_GP:HJH9171202.1;Name=HJH9171202.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_001051;product=hypothetical protein;protein_id=HJH9171202.1;transl_table=11 DALFDA020000006.1 tpg gene 68718 68900 . - . ID=gene-O5C65_001052;Name=O5C65_001052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001052 DALFDA020000006.1 GeneMarkS-2+ CDS 68718 68900 . - 0 ID=cds-HJH9171203.1;Parent=gene-O5C65_001052;Dbxref=NCBI_GP:HJH9171203.1;Name=HJH9171203.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_001052;product=hypothetical protein;protein_id=HJH9171203.1;transl_table=11 DALFDA020000006.1 tpg gene 69091 69273 . - . ID=gene-O5C65_001053;Name=O5C65_001053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001053 DALFDA020000006.1 GeneMarkS-2+ CDS 69091 69273 . - 0 ID=cds-HJH9171204.1;Parent=gene-O5C65_001053;Dbxref=NCBI_GP:HJH9171204.1;Name=HJH9171204.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_001053;product=hypothetical protein;protein_id=HJH9171204.1;transl_table=11 DALFDA020000006.1 tpg gene 69721 70068 . - . ID=gene-O5C65_001054;Name=O5C65_001054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001054 DALFDA020000006.1 Protein Homology CDS 69721 70068 . - 0 ID=cds-HJH9171205.1;Parent=gene-O5C65_001054;Dbxref=NCBI_GP:HJH9171205.1;Name=HJH9171205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004916401.1;locus_tag=O5C65_001054;product=hypothetical protein;protein_id=HJH9171205.1;transl_table=11 DALFDA020000006.1 tpg gene 70077 70370 . - . ID=gene-O5C65_001055;Name=O5C65_001055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001055 DALFDA020000006.1 Protein Homology CDS 70077 70370 . - 0 ID=cds-HJH9171206.1;Parent=gene-O5C65_001055;Dbxref=NCBI_GP:HJH9171206.1;Name=HJH9171206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004916403.1;locus_tag=O5C65_001055;product=hypothetical protein;protein_id=HJH9171206.1;transl_table=11 DALFDA020000006.1 tpg gene 70564 71283 . - . ID=gene-O5C65_001056;Name=O5C65_001056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001056 DALFDA020000006.1 Protein Homology CDS 70564 71283 . - 0 ID=cds-HJH9171207.1;Parent=gene-O5C65_001056;Dbxref=NCBI_GP:HJH9171207.1;Name=HJH9171207.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000162431.1;locus_tag=O5C65_001056;product=LexA family protein;protein_id=HJH9171207.1;transl_table=11 DALFDA020000006.1 tpg gene 71386 71625 . + . ID=gene-O5C65_001057;Name=O5C65_001057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001057 DALFDA020000006.1 Protein Homology CDS 71386 71625 . + 0 ID=cds-HJH9171208.1;Parent=gene-O5C65_001057;Dbxref=NCBI_GP:HJH9171208.1;Name=HJH9171208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660859.1;locus_tag=O5C65_001057;product=helix-turn-helix domain-containing protein;protein_id=HJH9171208.1;transl_table=11 DALFDA020000006.1 tpg gene 72162 72530 . + . ID=gene-O5C65_001058;Name=O5C65_001058;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001058 DALFDA020000006.1 Protein Homology CDS 72162 72530 . + 0 ID=cds-HJH9171209.1;Parent=gene-O5C65_001058;Dbxref=NCBI_GP:HJH9171209.1;Name=HJH9171209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000470023.1;locus_tag=O5C65_001058;product=hypothetical protein;protein_id=HJH9171209.1;transl_table=11 DALFDA020000006.1 tpg gene 72543 74063 . + . ID=gene-O5C65_001059;Name=O5C65_001059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001059 DALFDA020000006.1 Protein Homology CDS 72543 74063 . + 0 ID=cds-HJH9171210.1;Parent=gene-O5C65_001059;Dbxref=NCBI_GP:HJH9171210.1;Name=HJH9171210.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232230.1;locus_tag=O5C65_001059;product=DEAD/DEAH box helicase family protein;protein_id=HJH9171210.1;transl_table=11 DALFDA020000006.1 tpg gene 74057 75031 . + . ID=gene-O5C65_001060;Name=O5C65_001060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001060 DALFDA020000006.1 Protein Homology CDS 74057 75031 . + 0 ID=cds-HJH9171211.1;Parent=gene-O5C65_001060;Dbxref=NCBI_GP:HJH9171211.1;Name=HJH9171211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001694414.1;locus_tag=O5C65_001060;product=DUF7146 domain-containing protein;protein_id=HJH9171211.1;transl_table=11 DALFDA020000006.1 tpg gene 75031 75480 . + . ID=gene-O5C65_001061;Name=O5C65_001061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001061 DALFDA020000006.1 Protein Homology CDS 75031 75480 . + 0 ID=cds-HJH9171212.1;Parent=gene-O5C65_001061;Dbxref=NCBI_GP:HJH9171212.1;Name=HJH9171212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000402091.1;locus_tag=O5C65_001061;product=DUF1367 family protein;protein_id=HJH9171212.1;transl_table=11 DALFDA020000006.1 tpg gene 75489 76049 . + . ID=gene-O5C65_001062;Name=O5C65_001062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001062 DALFDA020000006.1 Protein Homology CDS 75489 76049 . + 0 ID=cds-HJH9171213.1;Parent=gene-O5C65_001062;Dbxref=NCBI_GP:HJH9171213.1;Name=HJH9171213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232227.1;locus_tag=O5C65_001062;product=recombination protein NinG;protein_id=HJH9171213.1;transl_table=11 DALFDA020000006.1 tpg gene 76046 76714 . + . ID=gene-O5C65_001063;Name=O5C65_001063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001063 DALFDA020000006.1 Protein Homology CDS 76046 76714 . + 0 ID=cds-HJH9171214.1;Parent=gene-O5C65_001063;Dbxref=NCBI_GP:HJH9171214.1;Name=HJH9171214.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018074.6;locus_tag=O5C65_001063;product=bacteriophage antitermination protein Q;protein_id=HJH9171214.1;transl_table=11 DALFDA020000006.1 tpg gene 77473 77706 . + . ID=gene-O5C65_001064;Name=O5C65_001064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001064 DALFDA020000006.1 Protein Homology CDS 77473 77706 . + 0 ID=cds-HJH9171215.1;Parent=gene-O5C65_001064;Dbxref=NCBI_GP:HJH9171215.1;Name=HJH9171215.1;Ontology_term=GO:0001907,GO:0019835,GO:0140911;gbkey=CDS;go_function=pore-forming activity|0140911||IEA;go_process=symbiont-mediated killing of host cell|0001907||IEA,cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001312301.1;locus_tag=O5C65_001064;product=phage holin;protein_id=HJH9171215.1;transl_table=11 DALFDA020000006.1 tpg gene 77684 78172 . + . ID=gene-O5C65_001065;Name=O5C65_001065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001065 DALFDA020000006.1 Protein Homology CDS 77684 78172 . + 0 ID=cds-HJH9171216.1;Parent=gene-O5C65_001065;Dbxref=NCBI_GP:HJH9171216.1;Name=HJH9171216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001208103.1;locus_tag=O5C65_001065;product=lysozyme;protein_id=HJH9171216.1;transl_table=11 DALFDA020000006.1 tpg gene 78169 78636 . + . ID=gene-O5C65_001066;Name=O5C65_001066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001066 DALFDA020000006.1 Protein Homology CDS 78169 78636 . + 0 ID=cds-HJH9171217.1;Parent=gene-O5C65_001066;Dbxref=NCBI_GP:HJH9171217.1;Name=HJH9171217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835730.1;locus_tag=O5C65_001066;product=lysis protein;protein_id=HJH9171217.1;transl_table=11 DALFDA020000006.1 tpg gene 78760 79197 . + . ID=gene-O5C65_001067;Name=O5C65_001067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001067 DALFDA020000006.1 Protein Homology CDS 78760 79197 . + 0 ID=cds-HJH9171218.1;Parent=gene-O5C65_001067;Dbxref=NCBI_GP:HJH9171218.1;Name=HJH9171218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113731.1;locus_tag=O5C65_001067;product=terminase;protein_id=HJH9171218.1;transl_table=11 DALFDA020000006.1 tpg gene 79184 80539 . + . ID=gene-O5C65_001068;Name=O5C65_001068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001068 DALFDA020000006.1 Protein Homology CDS 79184 80539 . + 0 ID=cds-HJH9171219.1;Parent=gene-O5C65_001068;Dbxref=NCBI_GP:HJH9171219.1;Name=HJH9171219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004094681.1;locus_tag=O5C65_001068;product=PBSX family phage terminase large subunit;protein_id=HJH9171219.1;transl_table=11 DALFDA020000006.1 tpg gene 80539 81987 . + . ID=gene-O5C65_001069;Name=O5C65_001069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001069 DALFDA020000006.1 Protein Homology CDS 80539 81987 . + 0 ID=cds-HJH9171220.1;Parent=gene-O5C65_001069;Dbxref=NCBI_GP:HJH9171220.1;Name=HJH9171220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526488.1;locus_tag=O5C65_001069;product=DUF1073 domain-containing protein;protein_id=HJH9171220.1;transl_table=11 DALFDA020000006.1 tpg gene 81953 82660 . + . ID=gene-O5C65_001070;Name=O5C65_001070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001070 DALFDA020000006.1 Protein Homology CDS 81953 82660 . + 0 ID=cds-HJH9171221.1;Parent=gene-O5C65_001070;Dbxref=NCBI_GP:HJH9171221.1;Name=HJH9171221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010848172.1;locus_tag=O5C65_001070;product=phage minor head protein;protein_id=HJH9171221.1;transl_table=11 DALFDA020000006.1 tpg gene 82657 83928 . + . ID=gene-O5C65_001071;Name=O5C65_001071;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001071 DALFDA020000006.1 Protein Homology CDS 82657 83928 . + 0 ID=cds-HJH9171222.1;Parent=gene-O5C65_001071;Dbxref=NCBI_GP:HJH9171222.1;Name=HJH9171222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118737.1;locus_tag=O5C65_001071;product=DUF2213 domain-containing protein;protein_id=HJH9171222.1;transl_table=11 DALFDA020000006.1 tpg gene 83928 84425 . + . ID=gene-O5C65_001072;Name=O5C65_001072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001072 DALFDA020000006.1 Protein Homology CDS 83928 84425 . + 0 ID=cds-HJH9171223.1;Parent=gene-O5C65_001072;Dbxref=NCBI_GP:HJH9171223.1;Name=HJH9171223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411636.1;locus_tag=O5C65_001072;product=structural cement protein Gp24;protein_id=HJH9171223.1;transl_table=11 DALFDA020000006.1 tpg gene 84441 85385 . + . ID=gene-O5C65_001073;Name=O5C65_001073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001073 DALFDA020000006.1 Protein Homology CDS 84441 85385 . + 0 ID=cds-HJH9171224.1;Parent=gene-O5C65_001073;Dbxref=NCBI_GP:HJH9171224.1;Name=HJH9171224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120172.1;locus_tag=O5C65_001073;product=DUF2184 domain-containing protein;protein_id=HJH9171224.1;transl_table=11 DALFDA020000006.1 tpg gene 85420 85815 . + . ID=gene-O5C65_001074;Name=O5C65_001074;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001074 DALFDA020000006.1 Protein Homology CDS 85420 85815 . + 0 ID=cds-HJH9171225.1;Parent=gene-O5C65_001074;Dbxref=NCBI_GP:HJH9171225.1;Name=HJH9171225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411634.1;locus_tag=O5C65_001074;product=DUF4054 domain-containing protein;protein_id=HJH9171225.1;transl_table=11 DALFDA020000006.1 tpg gene 85812 86429 . + . ID=gene-O5C65_001075;Name=O5C65_001075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001075 DALFDA020000006.1 Protein Homology CDS 85812 86429 . + 0 ID=cds-HJH9171226.1;Parent=gene-O5C65_001075;Dbxref=NCBI_GP:HJH9171226.1;Name=HJH9171226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118741.1;locus_tag=O5C65_001075;product=hypothetical protein;protein_id=HJH9171226.1;transl_table=11 DALFDA020000006.1 tpg gene 86429 86815 . + . ID=gene-O5C65_001076;Name=O5C65_001076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001076 DALFDA020000006.1 Protein Homology CDS 86429 86815 . + 0 ID=cds-HJH9171227.1;Parent=gene-O5C65_001076;Dbxref=NCBI_GP:HJH9171227.1;Name=HJH9171227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001687820.1;locus_tag=O5C65_001076;product=head-tail adaptor;protein_id=HJH9171227.1;transl_table=11 DALFDA020000006.1 tpg gene 86799 87353 . + . ID=gene-O5C65_001077;Name=O5C65_001077;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001077 DALFDA020000006.1 Protein Homology CDS 86799 87353 . + 0 ID=cds-HJH9171228.1;Parent=gene-O5C65_001077;Dbxref=NCBI_GP:HJH9171228.1;Name=HJH9171228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013578257.1;locus_tag=O5C65_001077;product=phage neck terminator protein;protein_id=HJH9171228.1;transl_table=11 DALFDA020000006.1 tpg gene 87358 88836 . + . ID=gene-O5C65_001078;Name=O5C65_001078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001078 DALFDA020000006.1 Protein Homology CDS 87358 88836 . + 0 ID=cds-HJH9171229.1;Parent=gene-O5C65_001078;Dbxref=NCBI_GP:HJH9171229.1;Name=HJH9171229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411485.1;locus_tag=O5C65_001078;product=DUF3383 domain-containing protein;protein_id=HJH9171229.1;transl_table=11 DALFDA020000006.1 tpg gene 88846 89289 . + . ID=gene-O5C65_001079;Name=O5C65_001079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001079 DALFDA020000006.1 Protein Homology CDS 88846 89289 . + 0 ID=cds-HJH9171230.1;Parent=gene-O5C65_001079;Dbxref=NCBI_GP:HJH9171230.1;Name=HJH9171230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000017200.1;locus_tag=O5C65_001079;product=phage structural protein;protein_id=HJH9171230.1;transl_table=11 DALFDA020000006.1 tpg gene 89293 89700 . + . ID=gene-O5C65_001080;Name=O5C65_001080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001080 DALFDA020000006.1 Protein Homology CDS 89293 89700 . + 0 ID=cds-HJH9171231.1;Parent=gene-O5C65_001080;Dbxref=NCBI_GP:HJH9171231.1;Name=HJH9171231.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152564.1;locus_tag=O5C65_001080;product=phage tail assembly chaperone;protein_id=HJH9171231.1;transl_table=11 DALFDA020000006.1 tpg gene 89745 89897 . + . ID=gene-O5C65_001081;Name=O5C65_001081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001081 DALFDA020000006.1 Protein Homology CDS 89745 89897 . + 0 ID=cds-HJH9171232.1;Parent=gene-O5C65_001081;Dbxref=NCBI_GP:HJH9171232.1;Name=HJH9171232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915210.1;locus_tag=O5C65_001081;product=DUF6889 family protein;protein_id=HJH9171232.1;transl_table=11 DALFDA020000006.1 tpg gene 89887 91974 . + . ID=gene-O5C65_001082;Name=O5C65_001082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001082 DALFDA020000006.1 GeneMarkS-2+ CDS 89887 91974 . + 0 ID=cds-HJH9171233.1;Parent=gene-O5C65_001082;Dbxref=NCBI_GP:HJH9171233.1;Name=HJH9171233.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_001082;product=lytic transglycosylase;protein_id=HJH9171233.1;transl_table=11 DALFDA020000006.1 tpg gene 92037 92570 . + . ID=gene-O5C65_001083;Name=O5C65_001083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001083 DALFDA020000006.1 Protein Homology CDS 92037 92570 . + 0 ID=cds-HJH9171234.1;Parent=gene-O5C65_001083;Dbxref=NCBI_GP:HJH9171234.1;Name=HJH9171234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000353817.1;locus_tag=O5C65_001083;product=phage baseplate protein;protein_id=HJH9171234.1;transl_table=11 DALFDA020000006.1 tpg gene 92567 92872 . + . ID=gene-O5C65_001084;Name=O5C65_001084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001084 DALFDA020000006.1 Protein Homology CDS 92567 92872 . + 0 ID=cds-HJH9171235.1;Parent=gene-O5C65_001084;Dbxref=NCBI_GP:HJH9171235.1;Name=HJH9171235.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046292.2;locus_tag=O5C65_001084;product=phage baseplate plug family protein;protein_id=HJH9171235.1;transl_table=11 DALFDA020000006.1 tpg gene 92876 93877 . + . ID=gene-O5C65_001085;Name=O5C65_001085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001085 DALFDA020000006.1 Protein Homology CDS 92876 93877 . + 0 ID=cds-HJH9171236.1;Parent=gene-O5C65_001085;Dbxref=NCBI_GP:HJH9171236.1;Name=HJH9171236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551483.1;locus_tag=O5C65_001085;product=hypothetical protein;protein_id=HJH9171236.1;transl_table=11 DALFDA020000006.1 tpg gene 93884 94222 . + . ID=gene-O5C65_001086;Name=O5C65_001086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001086 DALFDA020000006.1 Protein Homology CDS 93884 94222 . + 0 ID=cds-HJH9171237.1;Parent=gene-O5C65_001086;Dbxref=NCBI_GP:HJH9171237.1;Name=HJH9171237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000832851.1;locus_tag=O5C65_001086;product=hypothetical protein;protein_id=HJH9171237.1;transl_table=11 DALFDA020000006.1 tpg gene 94450 95199 . + . ID=gene-O5C65_001087;Name=O5C65_001087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001087 DALFDA020000006.1 Protein Homology CDS 94450 95199 . + 0 ID=cds-HJH9171238.1;Parent=gene-O5C65_001087;Dbxref=NCBI_GP:HJH9171238.1;Name=HJH9171238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192275.1;locus_tag=O5C65_001087;product=Gp138 family membrane-puncturing spike protein;protein_id=HJH9171238.1;transl_table=11 DALFDA020000006.1 tpg gene 95196 95543 . + . ID=gene-O5C65_001088;Name=O5C65_001088;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001088 DALFDA020000006.1 Protein Homology CDS 95196 95543 . + 0 ID=cds-HJH9171239.1;Parent=gene-O5C65_001088;Dbxref=NCBI_GP:HJH9171239.1;Name=HJH9171239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001270645.1;locus_tag=O5C65_001088;product=hypothetical protein;protein_id=HJH9171239.1;transl_table=11 DALFDA020000006.1 tpg gene 95536 96729 . + . ID=gene-O5C65_001089;Name=O5C65_001089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001089 DALFDA020000006.1 Protein Homology CDS 95536 96729 . + 0 ID=cds-HJH9171240.1;Parent=gene-O5C65_001089;Dbxref=NCBI_GP:HJH9171240.1;Name=HJH9171240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004393463.1;locus_tag=O5C65_001089;product=baseplate J/gp47 family protein;protein_id=HJH9171240.1;transl_table=11 DALFDA020000006.1 tpg gene 96726 97301 . + . ID=gene-O5C65_001090;Name=O5C65_001090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001090 DALFDA020000006.1 Protein Homology CDS 96726 97301 . + 0 ID=cds-HJH9171241.1;Parent=gene-O5C65_001090;Dbxref=NCBI_GP:HJH9171241.1;Name=HJH9171241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147243.1;locus_tag=O5C65_001090;product=DUF2612 domain-containing protein;protein_id=HJH9171241.1;transl_table=11 DALFDA020000006.1 tpg pseudogene 97783 98334 . + . ID=gene-O5C65_001091;Name=O5C65_001091;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_001091;pseudo=true DALFDA020000006.1 Protein Homology CDS 97783 98334 . + 0 ID=cds-O5C65_001091;Parent=gene-O5C65_001091;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459903.1;locus_tag=O5C65_001091;product=phage tail protein;pseudo=true;transl_table=11 DALFDA020000006.1 tpg gene 98334 99089 . + . ID=gene-O5C65_001092;Name=O5C65_001092;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001092 DALFDA020000006.1 Protein Homology CDS 98334 99089 . + 0 ID=cds-HJH9171242.1;Parent=gene-O5C65_001092;Dbxref=NCBI_GP:HJH9171242.1;Name=HJH9171242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406345.1;locus_tag=O5C65_001092;product=DUF4376 domain-containing protein;protein_id=HJH9171242.1;transl_table=11 DALFDA020000006.1 tpg gene 99076 100050 . + . ID=gene-O5C65_001093;Name=O5C65_001093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001093 DALFDA020000006.1 Protein Homology CDS 99076 100050 . + 0 ID=cds-HJH9171243.1;Parent=gene-O5C65_001093;Dbxref=NCBI_GP:HJH9171243.1;Name=HJH9171243.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019996.6;locus_tag=O5C65_001093;product=prophage tail fiber N-terminal domain-containing protein;protein_id=HJH9171243.1;transl_table=11 DALFDA020000006.1 tpg gene 100060 100638 . + . ID=gene-O5C65_001094;Name=O5C65_001094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001094 DALFDA020000006.1 Protein Homology CDS 100060 100638 . + 0 ID=cds-HJH9171244.1;Parent=gene-O5C65_001094;Dbxref=NCBI_GP:HJH9171244.1;Name=HJH9171244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001021562.1;locus_tag=O5C65_001094;product=DUF4376 domain-containing protein;protein_id=HJH9171244.1;transl_table=11 DALFDA020000006.1 tpg gene 100762 101136 . + . ID=gene-O5C65_001095;Name=O5C65_001095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001095 DALFDA020000006.1 Protein Homology CDS 100762 101136 . + 0 ID=cds-HJH9171245.1;Parent=gene-O5C65_001095;Dbxref=NCBI_GP:HJH9171245.1;Name=HJH9171245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000033281.1;locus_tag=O5C65_001095;product=DUF1353 domain-containing protein;protein_id=HJH9171245.1;transl_table=11 DALFDA020000006.1 tpg gene 101805 102002 . - . ID=gene-O5C65_001096;Name=O5C65_001096;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001096 DALFDA020000006.1 Protein Homology CDS 101805 102002 . - 0 ID=cds-HJH9171246.1;Parent=gene-O5C65_001096;Dbxref=NCBI_GP:HJH9171246.1;Name=HJH9171246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913868.1;locus_tag=O5C65_001096;product=hypothetical protein;protein_id=HJH9171246.1;transl_table=11 DALFDA020000006.1 tpg gene 102696 103553 . + . ID=gene-O5C65_001097;Name=yibB;gbkey=Gene;gene=yibB;gene_biotype=protein_coding;locus_tag=O5C65_001097 DALFDA020000006.1 Protein Homology CDS 102696 103553 . + 0 ID=cds-HJH9171247.1;Parent=gene-O5C65_001097;Dbxref=NCBI_GP:HJH9171247.1;Name=HJH9171247.1;gbkey=CDS;gene=yibB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000842825.1;locus_tag=O5C65_001097;product=protein YibB;protein_id=HJH9171247.1;transl_table=11 DALFDA020000006.1 tpg gene 103623 105164 . - . ID=gene-O5C65_001098;Name=O5C65_001098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001098 DALFDA020000006.1 Protein Homology CDS 103623 105164 . - 0 ID=cds-HJH9171248.1;Parent=gene-O5C65_001098;Dbxref=NCBI_GP:HJH9171248.1;Name=HJH9171248.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000813703.1;locus_tag=O5C65_001098;product=sulfatase-like hydrolase/transferase;protein_id=HJH9171248.1;transl_table=11 DALFDA020000006.1 tpg gene 105728 106408 . - . ID=gene-O5C65_001099;Name=pipA;gbkey=Gene;gene=pipA;gene_biotype=protein_coding;locus_tag=O5C65_001099 DALFDA020000006.1 Protein Homology CDS 105728 106408 . - 0 ID=cds-HJH9171249.1;Parent=gene-O5C65_001099;Dbxref=NCBI_GP:HJH9171249.1;Name=HJH9171249.1;gbkey=CDS;gene=pipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460060.1;locus_tag=O5C65_001099;product=type III secretion system effector protease PipA;protein_id=HJH9171249.1;transl_table=11 DALFDA020000006.1 tpg gene 106630 107505 . - . ID=gene-O5C65_001100;Name=pipB;gbkey=Gene;gene=pipB;gene_biotype=protein_coding;locus_tag=O5C65_001100 DALFDA020000006.1 Protein Homology CDS 106630 107505 . - 0 ID=cds-HJH9171250.1;Parent=gene-O5C65_001100;Dbxref=NCBI_GP:HJH9171250.1;Name=HJH9171250.1;gbkey=CDS;gene=pipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460061.1;locus_tag=O5C65_001100;product=SPI-2 type III secretion system effector PipB;protein_id=HJH9171250.1;transl_table=11 DALFDA020000006.1 tpg gene 108077 108301 . - . ID=gene-O5C65_001101;Name=O5C65_001101;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001101 DALFDA020000006.1 Protein Homology CDS 108077 108301 . - 0 ID=cds-HJH9171251.1;Parent=gene-O5C65_001101;Dbxref=NCBI_GP:HJH9171251.1;Name=HJH9171251.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026627.6;locus_tag=O5C65_001101;product=PagK family vesicle-borne virulence factor;protein_id=HJH9171251.1;transl_table=11 DALFDA020000006.1 tpg gene 108337 108657 . + . ID=gene-O5C65_001102;Name=O5C65_001102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001102 DALFDA020000006.1 Protein Homology CDS 108337 108657 . + 0 ID=cds-HJH9171252.1;Parent=gene-O5C65_001102;Dbxref=NCBI_GP:HJH9171252.1;Name=HJH9171252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460062.1;locus_tag=O5C65_001102;product=hypothetical protein;protein_id=HJH9171252.1;transl_table=11 DALFDA020000006.1 tpg gene 108667 109008 . - . ID=gene-O5C65_001103;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=O5C65_001103 DALFDA020000006.1 Protein Homology CDS 108667 109008 . - 0 ID=cds-HJH9171253.1;Parent=gene-O5C65_001103;Dbxref=NCBI_GP:HJH9171253.1;Name=HJH9171253.1;gbkey=CDS;gene=sigE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460063.1;locus_tag=O5C65_001103;product=type III secretion system chaperone SigE;protein_id=HJH9171253.1;transl_table=11 DALFDA020000006.1 tpg gene 109025 110710 . - . ID=gene-O5C65_001104;Name=sopB;gbkey=Gene;gene=sopB;gene_biotype=protein_coding;locus_tag=O5C65_001104 DALFDA020000006.1 Protein Homology CDS 109025 110710 . - 0 ID=cds-HJH9171254.1;Parent=gene-O5C65_001104;Dbxref=NCBI_GP:HJH9171254.1;Name=HJH9171254.1;gbkey=CDS;gene=sopB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460064.1;locus_tag=O5C65_001104;product=SPI-1 type III secretion system effector inositol phosphate phosphatase SopB;protein_id=HJH9171254.1;transl_table=11 DALFDA020000006.1 tpg gene 111043 111213 . + . ID=gene-O5C65_001105;Name=O5C65_001105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001105 DALFDA020000006.1 Protein Homology CDS 111043 111213 . + 0 ID=cds-HJH9171255.1;Parent=gene-O5C65_001105;Dbxref=NCBI_GP:HJH9171255.1;Name=HJH9171255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460065.1;locus_tag=O5C65_001105;product=YlcI/YnfO family protein;protein_id=HJH9171255.1;transl_table=11 DALFDA020000006.1 tpg gene 111214 111324 . - . ID=gene-O5C65_001106;Name=O5C65_001106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001106 DALFDA020000006.1 Protein Homology CDS 111214 111324 . - 0 ID=cds-HJH9171256.1;Parent=gene-O5C65_001106;Dbxref=NCBI_GP:HJH9171256.1;Name=HJH9171256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447525.1;locus_tag=O5C65_001106;product=hypothetical protein;protein_id=HJH9171256.1;transl_table=11 DALFDA020000006.1 tpg gene 111433 112902 . - . ID=gene-O5C65_001107;Name=O5C65_001107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001107 DALFDA020000006.1 Protein Homology CDS 111433 112902 . - 0 ID=cds-HJH9171257.1;Parent=gene-O5C65_001107;Dbxref=NCBI_GP:HJH9171257.1;Name=HJH9171257.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460067.1;locus_tag=O5C65_001107;product=C69 family dipeptidase;protein_id=HJH9171257.1;transl_table=11 DALFDA020000006.1 tpg gene 113075 114439 . - . ID=gene-O5C65_001108;Name=O5C65_001108;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001108 DALFDA020000006.1 Protein Homology CDS 113075 114439 . - 0 ID=cds-HJH9171258.1;Parent=gene-O5C65_001108;Dbxref=NCBI_GP:HJH9171258.1;Name=HJH9171258.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447527.1;locus_tag=O5C65_001108;product=heavy metal sensor histidine kinase;protein_id=HJH9171258.1;transl_table=11 DALFDA020000006.1 tpg gene 114432 115112 . - . ID=gene-O5C65_001109;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=O5C65_001109 DALFDA020000006.1 Protein Homology CDS 114432 115112 . - 0 ID=cds-HJH9171259.1;Parent=gene-O5C65_001109;Dbxref=NCBI_GP:HJH9171259.1;Name=HJH9171259.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698203.1;locus_tag=O5C65_001109;product=response regulator transcription factor HprR;protein_id=HJH9171259.1;transl_table=11 DALFDA020000006.1 tpg gene 115248 115658 . + . ID=gene-O5C65_001110;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=O5C65_001110 DALFDA020000006.1 Protein Homology CDS 115248 115658 . + 0 ID=cds-HJH9171260.1;Parent=gene-O5C65_001110;Dbxref=NCBI_GP:HJH9171260.1;Name=HJH9171260.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460070.1;locus_tag=O5C65_001110;product=hydroxyisourate hydrolase;protein_id=HJH9171260.1;transl_table=11 DALFDA020000006.1 tpg gene 115991 116503 . - . ID=gene-O5C65_001111;Name=O5C65_001111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001111 DALFDA020000006.1 Protein Homology CDS 115991 116503 . - 0 ID=cds-HJH9171261.1;Parent=gene-O5C65_001111;Dbxref=NCBI_GP:HJH9171261.1;Name=HJH9171261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460071.1;locus_tag=O5C65_001111;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=HJH9171261.1;transl_table=11 DALFDA020000006.1 tpg gene 116521 118083 . - . ID=gene-O5C65_001112;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=O5C65_001112 DALFDA020000006.1 Protein Homology CDS 116521 118083 . - 0 ID=cds-HJH9171262.1;Parent=gene-O5C65_001112;Dbxref=NCBI_GP:HJH9171262.1;Name=HJH9171262.1;Ontology_term=GO:0010124,GO:0016712,GO:0050660;gbkey=CDS;gene=hpaB;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C reduced flavin or flavoprotein as one donor%2C and incorporation of one atom of oxygen|0016712||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=O5C65_001112;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=HJH9171262.1;transl_table=11 DALFDA020000006.1 tpg gene 118301 118741 . - . ID=gene-O5C65_001113;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=O5C65_001113 DALFDA020000006.1 Protein Homology CDS 118301 118741 . - 0 ID=cds-HJH9171263.1;Parent=gene-O5C65_001113;Dbxref=NCBI_GP:HJH9171263.1;Name=HJH9171263.1;Ontology_term=GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460073.1;locus_tag=O5C65_001113;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=HJH9171263.1;transl_table=11 DALFDA020000006.1 tpg gene 119017 120306 . + . ID=gene-O5C65_001114;Name=hpaG;gbkey=Gene;gene=hpaG;gene_biotype=protein_coding;locus_tag=O5C65_001114 DALFDA020000006.1 Protein Homology CDS 119017 120306 . + 0 ID=cds-HJH9171264.1;Parent=gene-O5C65_001114;Dbxref=NCBI_GP:HJH9171264.1;Name=HJH9171264.1;Ontology_term=GO:1901023,GO:0008704,GO:0018800;gbkey=CDS;gene=hpaG;go_function=5-carboxymethyl-2-hydroxymuconate delta-isomerase activity|0008704||IEA,5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase activity|0018800||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460074.1;locus_tag=O5C65_001114;product=4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase;protein_id=HJH9171264.1;transl_table=11 DALFDA020000006.1 tpg gene 120303 121769 . + . ID=gene-O5C65_001115;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=O5C65_001115 DALFDA020000006.1 Protein Homology CDS 120303 121769 . + 0 ID=cds-HJH9171265.1;Parent=gene-O5C65_001115;Dbxref=NCBI_GP:HJH9171265.1;Name=HJH9171265.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460075.1;locus_tag=O5C65_001115;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=HJH9171265.1;transl_table=11 DALFDA020000006.1 tpg gene 121771 122622 . + . ID=gene-O5C65_001116;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=O5C65_001116 DALFDA020000006.1 Protein Homology CDS 121771 122622 . + 0 ID=cds-HJH9171266.1;Parent=gene-O5C65_001116;Dbxref=NCBI_GP:HJH9171266.1;Name=HJH9171266.1;Ontology_term=GO:0008152,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460076.1;locus_tag=O5C65_001116;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=HJH9171266.1;transl_table=11 DALFDA020000006.1 tpg gene 122632 123012 . + . ID=gene-O5C65_001117;Name=O5C65_001117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001117 DALFDA020000006.1 Protein Homology CDS 122632 123012 . + 0 ID=cds-HJH9171267.1;Parent=gene-O5C65_001117;Dbxref=NCBI_GP:HJH9171267.1;Name=HJH9171267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460077.1;locus_tag=O5C65_001117;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=HJH9171267.1;transl_table=11 DALFDA020000006.1 tpg gene 123156 123959 . + . ID=gene-O5C65_001118;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=O5C65_001118 DALFDA020000006.1 Protein Homology CDS 123156 123959 . + 0 ID=cds-HJH9171268.1;Parent=gene-O5C65_001118;Dbxref=NCBI_GP:HJH9171268.1;Name=HJH9171268.1;Ontology_term=GO:0009056,GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460078.1;locus_tag=O5C65_001118;product=2-oxo-hept-4-ene-1%2C7-dioate hydratase;protein_id=HJH9171268.1;transl_table=11 DALFDA020000006.1 tpg gene 123970 124761 . + . ID=gene-O5C65_001119;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=O5C65_001119 DALFDA020000006.1 Protein Homology CDS 123970 124761 . + 0 ID=cds-HJH9171269.1;Parent=gene-O5C65_001119;Dbxref=NCBI_GP:HJH9171269.1;Name=HJH9171269.1;Ontology_term=GO:0010124;gbkey=CDS;gene=hpaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460079.1;locus_tag=O5C65_001119;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=HJH9171269.1;transl_table=11 DALFDA020000006.1 tpg gene 124834 126210 . + . ID=gene-O5C65_001120;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=O5C65_001120 DALFDA020000006.1 Protein Homology CDS 124834 126210 . + 0 ID=cds-HJH9171270.1;Parent=gene-O5C65_001120;Dbxref=NCBI_GP:HJH9171270.1;Name=HJH9171270.1;Ontology_term=GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=O5C65_001120;product=4-hydroxyphenylacetate permease;protein_id=HJH9171270.1;transl_table=11 DALFDA020000006.1 tpg gene 126220 127116 . + . ID=gene-O5C65_001121;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=O5C65_001121 DALFDA020000006.1 Protein Homology CDS 126220 127116 . + 0 ID=cds-HJH9171271.1;Parent=gene-O5C65_001121;Dbxref=NCBI_GP:HJH9171271.1;Name=HJH9171271.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460081.1;locus_tag=O5C65_001121;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=HJH9171271.1;transl_table=11 DALFDA020000006.1 tpg gene 127130 128068 . + . ID=gene-O5C65_001122;Name=O5C65_001122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001122 DALFDA020000006.1 Protein Homology CDS 127130 128068 . + 0 ID=cds-HJH9171272.1;Parent=gene-O5C65_001122;Dbxref=NCBI_GP:HJH9171272.1;Name=HJH9171272.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460082.1;locus_tag=O5C65_001122;product=MBL fold metallo-hydrolase;protein_id=HJH9171272.1;transl_table=11 DALFDA020000006.1 tpg gene 128476 128838 . - . ID=gene-O5C65_001123;Name=O5C65_001123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001123 DALFDA020000006.1 Protein Homology CDS 128476 128838 . - 0 ID=cds-HJH9171273.1;Parent=gene-O5C65_001123;Dbxref=NCBI_GP:HJH9171273.1;Name=HJH9171273.1;Ontology_term=GO:0043856,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460083.1;locus_tag=O5C65_001123;product=anti-adapter protein IraM;protein_id=HJH9171273.1;transl_table=11 DALFDA020000006.1 tpg gene 129492 129797 . - . ID=gene-O5C65_001124;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=O5C65_001124 DALFDA020000006.1 Protein Homology CDS 129492 129797 . - 0 ID=cds-HJH9171274.1;Parent=gene-O5C65_001124;Dbxref=NCBI_GP:HJH9171274.1;Name=HJH9171274.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460084.1;locus_tag=O5C65_001124;product=chaperone modulator CbpM;protein_id=HJH9171274.1;transl_table=11 DALFDA020000006.1 tpg gene 129797 130717 . - . ID=gene-O5C65_001125;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=O5C65_001125 DALFDA020000006.1 Protein Homology CDS 129797 130717 . - 0 ID=cds-HJH9171275.1;Parent=gene-O5C65_001125;Dbxref=NCBI_GP:HJH9171275.1;Name=HJH9171275.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460085.1;locus_tag=O5C65_001125;product=curved DNA-binding protein;protein_id=HJH9171275.1;transl_table=11 DALFDA020000006.1 tpg gene 130952 131314 . + . ID=gene-O5C65_001126;Name=O5C65_001126;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001126 DALFDA020000006.1 Protein Homology CDS 130952 131314 . + 0 ID=cds-HJH9171276.1;Parent=gene-O5C65_001126;Dbxref=NCBI_GP:HJH9171276.1;Name=HJH9171276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460086.1;locus_tag=O5C65_001126;product=copper resistance protein;protein_id=HJH9171276.1;transl_table=11 DALFDA020000006.1 tpg gene 131363 133249 . + . ID=gene-O5C65_001127;Name=O5C65_001127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001127 DALFDA020000006.1 Protein Homology CDS 131363 133249 . + 0 ID=cds-HJH9171277.1;Parent=gene-O5C65_001127;Dbxref=NCBI_GP:HJH9171277.1;Name=HJH9171277.1;Ontology_term=GO:0009055,GO:0015036;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460087.1;locus_tag=O5C65_001127;product=protein-disulfide reductase DsbD family protein;protein_id=HJH9171277.1;transl_table=11 DALFDA020000006.1 tpg gene 133246 133869 . + . ID=gene-O5C65_001128;Name=O5C65_001128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001128 DALFDA020000006.1 Protein Homology CDS 133246 133869 . + 0 ID=cds-HJH9171278.1;Parent=gene-O5C65_001128;Dbxref=NCBI_GP:HJH9171278.1;Name=HJH9171278.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460088.1;locus_tag=O5C65_001128;product=DsbA family protein;protein_id=HJH9171278.1;transl_table=11 DALFDA020000006.1 tpg gene 133859 134365 . + . ID=gene-O5C65_001129;Name=O5C65_001129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001129 DALFDA020000006.1 Protein Homology CDS 133859 134365 . + 0 ID=cds-HJH9171279.1;Parent=gene-O5C65_001129;Dbxref=NCBI_GP:HJH9171279.1;Name=HJH9171279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460089.1;locus_tag=O5C65_001129;product=protein disulfide oxidoreductase;protein_id=HJH9171279.1;transl_table=11 DALFDA020000006.1 tpg gene 134498 135739 . + . ID=gene-O5C65_001130;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=O5C65_001130 DALFDA020000006.1 Protein Homology CDS 134498 135739 . + 0 ID=cds-HJH9171280.1;Parent=gene-O5C65_001130;Dbxref=NCBI_GP:HJH9171280.1;Name=HJH9171280.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460090.1;locus_tag=O5C65_001130;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=HJH9171280.1;transl_table=11 DALFDA020000006.1 tpg gene 135773 136000 . - . ID=gene-O5C65_001131;Name=O5C65_001131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001131 DALFDA020000006.1 Protein Homology CDS 135773 136000 . - 0 ID=cds-HJH9171281.1;Parent=gene-O5C65_001131;Dbxref=NCBI_GP:HJH9171281.1;Name=HJH9171281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=O5C65_001131;product=YccJ family protein;protein_id=HJH9171281.1;transl_table=11 DALFDA020000006.1 tpg gene 136021 136617 . - . ID=gene-O5C65_001132;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=O5C65_001132 DALFDA020000006.1 Protein Homology CDS 136021 136617 . - 0 ID=cds-HJH9171282.1;Parent=gene-O5C65_001132;Dbxref=NCBI_GP:HJH9171282.1;Name=HJH9171282.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460092.1;locus_tag=O5C65_001132;product=NAD(P)H:quinone oxidoreductase;protein_id=HJH9171282.1;transl_table=11 DALFDA020000006.1 tpg gene 137002 137169 . + . ID=gene-O5C65_001133;Name=O5C65_001133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001133 DALFDA020000006.1 Protein Homology CDS 137002 137169 . + 0 ID=cds-HJH9171283.1;Parent=gene-O5C65_001133;Dbxref=NCBI_GP:HJH9171283.1;Name=HJH9171283.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460093.1;locus_tag=O5C65_001133;product=general stress protein;protein_id=HJH9171283.1;transl_table=11 DALFDA020000006.1 tpg gene 137306 137944 . + . ID=gene-O5C65_001134;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=O5C65_001134 DALFDA020000006.1 Protein Homology CDS 137306 137944 . + 0 ID=cds-HJH9171284.1;Parent=gene-O5C65_001134;Dbxref=NCBI_GP:HJH9171284.1;Name=HJH9171284.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460094.1;locus_tag=O5C65_001134;product=HTH-type transcriptional regulator RutR;protein_id=HJH9171284.1;transl_table=11 DALFDA020000006.1 tpg gene 137941 138336 . - . ID=gene-O5C65_001135;Name=O5C65_001135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001135 DALFDA020000006.1 Protein Homology CDS 137941 138336 . - 0 ID=cds-HJH9171285.1;Parent=gene-O5C65_001135;Dbxref=NCBI_GP:HJH9171285.1;Name=HJH9171285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460095.1;locus_tag=O5C65_001135;product=lysozyme inhibitor LprI family protein;protein_id=HJH9171285.1;transl_table=11 DALFDA020000006.1 tpg gene 138395 142357 . - . ID=gene-O5C65_001136;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=O5C65_001136 DALFDA020000006.1 Protein Homology CDS 138395 142357 . - 0 ID=cds-HJH9171286.1;Parent=gene-O5C65_001136;Dbxref=NCBI_GP:HJH9171286.1;Name=HJH9171286.1;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447555.1;locus_tag=O5C65_001136;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=HJH9171286.1;transl_table=11 DALFDA020000006.1 tpg gene 142778 144286 . + . ID=gene-O5C65_001137;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=O5C65_001137 DALFDA020000006.1 Protein Homology CDS 142778 144286 . + 0 ID=cds-HJH9171287.1;Parent=gene-O5C65_001137;Dbxref=NCBI_GP:HJH9171287.1;Name=HJH9171287.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460097.1;locus_tag=O5C65_001137;product=sodium/proline symporter PutP;protein_id=HJH9171287.1;transl_table=11 DALFDA020000006.1 tpg gene 145179 145967 . + . ID=gene-O5C65_001138;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=O5C65_001138 DALFDA020000006.1 Protein Homology CDS 145179 145967 . + 0 ID=cds-HJH9171288.1;Parent=gene-O5C65_001138;Dbxref=NCBI_GP:HJH9171288.1;Name=HJH9171288.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=O5C65_001138;product=phosphate starvation-inducible protein PhoH;protein_id=HJH9171288.1;transl_table=11 DALFDA020000006.1 tpg gene 146072 146953 . - . ID=gene-O5C65_001139;Name=O5C65_001139;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001139 DALFDA020000006.1 Protein Homology CDS 146072 146953 . - 0 ID=cds-HJH9171289.1;Parent=gene-O5C65_001139;Dbxref=NCBI_GP:HJH9171289.1;Name=HJH9171289.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460099.1;locus_tag=O5C65_001139;product=MurR/RpiR family transcriptional regulator;protein_id=HJH9171289.1;transl_table=11 DALFDA020000006.1 tpg gene 147239 148735 . - . ID=gene-O5C65_001140;Name=O5C65_001140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001140 DALFDA020000006.1 Protein Homology CDS 147239 148735 . - 0 ID=cds-HJH9171290.1;Parent=gene-O5C65_001140;Dbxref=NCBI_GP:HJH9171290.1;Name=HJH9171290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460100.1;locus_tag=O5C65_001140;product=sodium:solute symporter;protein_id=HJH9171290.1;transl_table=11 DALFDA020000006.1 tpg gene 149072 149752 . - . ID=gene-O5C65_001141;Name=O5C65_001141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001141 DALFDA020000006.1 Protein Homology CDS 149072 149752 . - 0 ID=cds-HJH9171291.1;Parent=gene-O5C65_001141;Dbxref=NCBI_GP:HJH9171291.1;Name=HJH9171291.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460101.1;locus_tag=O5C65_001141;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=HJH9171291.1;transl_table=11 DALFDA020000006.1 tpg gene 150258 151418 . + . ID=gene-O5C65_001142;Name=O5C65_001142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001142 DALFDA020000006.1 Protein Homology CDS 150258 151418 . + 0 ID=cds-HJH9171292.1;Parent=gene-O5C65_001142;Dbxref=NCBI_GP:HJH9171292.1;Name=HJH9171292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460102.1;locus_tag=O5C65_001142;product=N-acetylneuraminate epimerase;protein_id=HJH9171292.1;transl_table=11 DALFDA020000006.1 tpg gene 151464 152156 . + . ID=gene-O5C65_001143;Name=O5C65_001143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001143 DALFDA020000006.1 Protein Homology CDS 151464 152156 . + 0 ID=cds-HJH9171293.1;Parent=gene-O5C65_001143;Dbxref=NCBI_GP:HJH9171293.1;Name=HJH9171293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460103.1;locus_tag=O5C65_001143;product=oligogalacturonate-specific porin KdgM family protein;protein_id=HJH9171293.1;transl_table=11 DALFDA020000006.1 tpg gene 152439 153719 . + . ID=gene-O5C65_001144;Name=O5C65_001144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001144 DALFDA020000006.1 Protein Homology CDS 152439 153719 . + 0 ID=cds-HJH9171294.1;Parent=gene-O5C65_001144;Dbxref=NCBI_GP:HJH9171294.1;Name=HJH9171294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460104.1;locus_tag=O5C65_001144;product=MFS transporter;protein_id=HJH9171294.1;transl_table=11 DALFDA020000006.1 tpg gene 153730 154836 . + . ID=gene-O5C65_001145;Name=O5C65_001145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001145 DALFDA020000006.1 Protein Homology CDS 153730 154836 . + 0 ID=cds-HJH9171295.1;Parent=gene-O5C65_001145;Dbxref=NCBI_GP:HJH9171295.1;Name=HJH9171295.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460105.1;locus_tag=O5C65_001145;product=Gfo/Idh/MocA family protein;protein_id=HJH9171295.1;transl_table=11 DALFDA020000006.1 tpg pseudogene 155003 155295 . - . ID=gene-O5C65_001146;Name=O5C65_001146;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_001146;pseudo=true DALFDA020000006.1 Protein Homology CDS 155003 155295 . - 0 ID=cds-O5C65_001146;Parent=gene-O5C65_001146;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806398.1;locus_tag=O5C65_001146;product=YciI family protein;pseudo=true;transl_table=11 DALFDA020000006.1 tpg gene 155374 155544 . + . ID=gene-O5C65_001147;Name=O5C65_001147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001147 DALFDA020000006.1 Protein Homology CDS 155374 155544 . + 0 ID=cds-HJH9171296.1;Parent=gene-O5C65_001147;Dbxref=NCBI_GP:HJH9171296.1;Name=HJH9171296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574160.1;locus_tag=O5C65_001147;product=hypothetical protein;protein_id=HJH9171296.1;transl_table=11 DALFDA020000006.1 tpg gene 156147 156605 . - . ID=gene-O5C65_001148;Name=O5C65_001148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001148 DALFDA020000006.1 Protein Homology CDS 156147 156605 . - 0 ID=cds-HJH9171297.1;Parent=gene-O5C65_001148;Dbxref=NCBI_GP:HJH9171297.1;Name=HJH9171297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000623372.1;locus_tag=O5C65_001148;product=lysozyme inhibitor LprI family protein;protein_id=HJH9171297.1;transl_table=11 DALFDA020000006.1 tpg gene 156729 157100 . - . ID=gene-O5C65_001149;Name=O5C65_001149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001149 DALFDA020000006.1 Protein Homology CDS 156729 157100 . - 0 ID=cds-HJH9171298.1;Parent=gene-O5C65_001149;Dbxref=NCBI_GP:HJH9171298.1;Name=HJH9171298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747240.1;locus_tag=O5C65_001149;product=hypothetical protein;protein_id=HJH9171298.1;transl_table=11 DALFDA020000006.1 tpg gene 157109 157549 . - . ID=gene-O5C65_001150;Name=O5C65_001150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001150 DALFDA020000006.1 Protein Homology CDS 157109 157549 . - 0 ID=cds-HJH9171299.1;Parent=gene-O5C65_001150;Dbxref=NCBI_GP:HJH9171299.1;Name=HJH9171299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001022123.1;locus_tag=O5C65_001150;product=hypothetical protein;protein_id=HJH9171299.1;transl_table=11 DALFDA020000006.1 tpg gene 157569 158441 . - . ID=gene-O5C65_001151;Name=O5C65_001151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001151 DALFDA020000006.1 Protein Homology CDS 157569 158441 . - 0 ID=cds-HJH9171300.1;Parent=gene-O5C65_001151;Dbxref=NCBI_GP:HJH9171300.1;Name=HJH9171300.1;Ontology_term=GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712141.1;locus_tag=O5C65_001151;product=LysM peptidoglycan-binding domain-containing protein;protein_id=HJH9171300.1;transl_table=11 DALFDA020000006.1 tpg gene 158474 158953 . - . ID=gene-O5C65_001152;Name=O5C65_001152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001152 DALFDA020000006.1 Protein Homology CDS 158474 158953 . - 0 ID=cds-HJH9171301.1;Parent=gene-O5C65_001152;Dbxref=NCBI_GP:HJH9171301.1;Name=HJH9171301.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284963.1;locus_tag=O5C65_001152;product=Hcp family type VI secretion system effector;protein_id=HJH9171301.1;transl_table=11 DALFDA020000006.1 tpg gene 158969 160333 . - . ID=gene-O5C65_001153;Name=impA;gbkey=Gene;gene=impA;gene_biotype=protein_coding;locus_tag=O5C65_001153 DALFDA020000006.1 Protein Homology CDS 158969 160333 . - 0 ID=cds-HJH9171302.1;Parent=gene-O5C65_001153;Dbxref=NCBI_GP:HJH9171302.1;Name=HJH9171302.1;gbkey=CDS;gene=impA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000076066.1;locus_tag=O5C65_001153;product=type VI secretion system protein impA;protein_id=HJH9171302.1;transl_table=11 DALFDA020000006.1 tpg gene 160344 163853 . - . ID=gene-O5C65_001154;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=O5C65_001154 DALFDA020000006.1 Protein Homology CDS 160344 163853 . - 0 ID=cds-HJH9171303.1;Parent=gene-O5C65_001154;Dbxref=NCBI_GP:HJH9171303.1;Name=HJH9171303.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssM;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001612399.1;locus_tag=O5C65_001154;product=type VI secretion system membrane subunit TssM;protein_id=HJH9171303.1;transl_table=11 DALFDA020000006.1 tpg gene 163872 165284 . - . ID=gene-O5C65_001155;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=O5C65_001155 DALFDA020000006.1 Protein Homology CDS 163872 165284 . - 0 ID=cds-HJH9171304.1;Parent=gene-O5C65_001155;Dbxref=NCBI_GP:HJH9171304.1;Name=HJH9171304.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001752219.1;locus_tag=O5C65_001155;product=type VI secretion system protein TssA;protein_id=HJH9171304.1;transl_table=11 DALFDA020000006.1 tpg gene 165286 166023 . - . ID=gene-O5C65_001156;Name=vasI;gbkey=Gene;gene=vasI;gene_biotype=protein_coding;locus_tag=O5C65_001156 DALFDA020000006.1 Protein Homology CDS 165286 166023 . - 0 ID=cds-HJH9171305.1;Parent=gene-O5C65_001156;Dbxref=NCBI_GP:HJH9171305.1;Name=HJH9171305.1;gbkey=CDS;gene=vasI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089149.1;locus_tag=O5C65_001156;product=type VI secretion system-associated protein VasI;protein_id=HJH9171305.1;transl_table=11 DALFDA020000006.1 tpg gene 166020 168782 . - . ID=gene-O5C65_001157;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=O5C65_001157 DALFDA020000006.1 Protein Homology CDS 166020 168782 . - 0 ID=cds-HJH9171306.1;Parent=gene-O5C65_001157;Dbxref=NCBI_GP:HJH9171306.1;Name=HJH9171306.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308250.1;locus_tag=O5C65_001157;product=type VI secretion system ATPase TssH;protein_id=HJH9171306.1;transl_table=11 DALFDA020000006.1 tpg gene 168795 169553 . - . ID=gene-O5C65_001158;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=O5C65_001158 DALFDA020000006.1 Protein Homology CDS 168795 169553 . - 0 ID=cds-HJH9171307.1;Parent=gene-O5C65_001158;Dbxref=NCBI_GP:HJH9171307.1;Name=HJH9171307.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343977.1;locus_tag=O5C65_001158;product=type IVB secretion system protein IcmH/DotU;protein_id=HJH9171307.1;transl_table=11 DALFDA020000006.1 tpg gene 169558 170889 . - . ID=gene-O5C65_001159;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=O5C65_001159 DALFDA020000006.1 Protein Homology CDS 169558 170889 . - 0 ID=cds-HJH9171308.1;Parent=gene-O5C65_001159;Dbxref=NCBI_GP:HJH9171308.1;Name=HJH9171308.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308252.1;locus_tag=O5C65_001159;product=type VI secretion system baseplate subunit TssK;protein_id=HJH9171308.1;transl_table=11 DALFDA020000006.1 tpg gene 170892 171425 . - . ID=gene-O5C65_001160;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=O5C65_001160 DALFDA020000006.1 Protein Homology CDS 170892 171425 . - 0 ID=cds-HJH9171309.1;Parent=gene-O5C65_001160;Dbxref=NCBI_GP:HJH9171309.1;Name=HJH9171309.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308253.1;locus_tag=O5C65_001160;product=type VI secretion system lipoprotein TssJ;protein_id=HJH9171309.1;transl_table=11 DALFDA020000006.1 tpg gene 171422 172708 . - . ID=gene-O5C65_001161;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=O5C65_001161 DALFDA020000006.1 Protein Homology CDS 171422 172708 . - 0 ID=cds-HJH9171310.1;Parent=gene-O5C65_001161;Dbxref=NCBI_GP:HJH9171310.1;Name=HJH9171310.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tagH;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308254.1;locus_tag=O5C65_001161;product=type VI secretion system-associated FHA domain protein TagH;protein_id=HJH9171310.1;transl_table=11 DALFDA020000006.1 tpg gene 172733 173821 . - . ID=gene-O5C65_001162;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=O5C65_001162 DALFDA020000006.1 Protein Homology CDS 172733 173821 . - 0 ID=cds-HJH9171311.1;Parent=gene-O5C65_001162;Dbxref=NCBI_GP:HJH9171311.1;Name=HJH9171311.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509052.1;locus_tag=O5C65_001162;product=type VI secretion system baseplate subunit TssG;protein_id=HJH9171311.1;transl_table=11 DALFDA020000006.1 tpg gene 173785 175638 . - . ID=gene-O5C65_001163;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=O5C65_001163 DALFDA020000006.1 Protein Homology CDS 173785 175638 . - 0 ID=cds-HJH9171312.1;Parent=gene-O5C65_001163;Dbxref=NCBI_GP:HJH9171312.1;Name=HJH9171312.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308256.1;locus_tag=O5C65_001163;product=type VI secretion system baseplate subunit TssF;protein_id=HJH9171312.1;transl_table=11 DALFDA020000006.1 tpg gene 175643 176059 . - . ID=gene-O5C65_001164;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=O5C65_001164 DALFDA020000006.1 Protein Homology CDS 175643 176059 . - 0 ID=cds-HJH9171313.1;Parent=gene-O5C65_001164;Dbxref=NCBI_GP:HJH9171313.1;Name=HJH9171313.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686004.1;locus_tag=O5C65_001164;product=type VI secretion system baseplate subunit TssE;protein_id=HJH9171313.1;transl_table=11 DALFDA020000006.1 tpg gene 176056 177528 . - . ID=gene-O5C65_001165;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=O5C65_001165 DALFDA020000006.1 Protein Homology CDS 176056 177528 . - 0 ID=cds-HJH9171314.1;Parent=gene-O5C65_001165;Dbxref=NCBI_GP:HJH9171314.1;Name=HJH9171314.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000056998.1;locus_tag=O5C65_001165;product=type VI secretion system contractile sheath large subunit;protein_id=HJH9171314.1;transl_table=11 DALFDA020000006.1 tpg gene 177577 177789 . - . ID=gene-O5C65_001166;Name=O5C65_001166;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001166 DALFDA020000006.1 Protein Homology CDS 177577 177789 . - 0 ID=cds-HJH9171315.1;Parent=gene-O5C65_001166;Dbxref=NCBI_GP:HJH9171315.1;Name=HJH9171315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000524272.1;locus_tag=O5C65_001166;product=hypothetical protein;protein_id=HJH9171315.1;transl_table=11 DALFDA020000006.1 tpg gene 177819 178322 . - . ID=gene-O5C65_001167;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=O5C65_001167 DALFDA020000006.1 Protein Homology CDS 177819 178322 . - 0 ID=cds-HJH9171316.1;Parent=gene-O5C65_001167;Dbxref=NCBI_GP:HJH9171316.1;Name=HJH9171316.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308260.1;locus_tag=O5C65_001167;product=type VI secretion system contractile sheath small subunit;protein_id=HJH9171316.1;transl_table=11 DALFDA020000006.1 tpg gene 178950 179468 . + . ID=gene-O5C65_001168;Name=O5C65_001168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001168 DALFDA020000006.1 Protein Homology CDS 178950 179468 . + 0 ID=cds-HJH9171317.1;Parent=gene-O5C65_001168;Dbxref=NCBI_GP:HJH9171317.1;Name=HJH9171317.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308261.1;locus_tag=O5C65_001168;product=Hcp family type VI secretion system effector;protein_id=HJH9171317.1;transl_table=11 DALFDA020000006.1 tpg gene 179691 181832 . + . ID=gene-O5C65_001169;Name=O5C65_001169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001169 DALFDA020000006.1 Protein Homology CDS 179691 181832 . + 0 ID=cds-HJH9171318.1;Parent=gene-O5C65_001169;Dbxref=NCBI_GP:HJH9171318.1;Name=HJH9171318.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308263.1;locus_tag=O5C65_001169;product=type VI secretion system tip protein VgrG;protein_id=HJH9171318.1;transl_table=11 DALFDA020000006.1 tpg gene 181901 182178 . + . ID=gene-O5C65_001170;Name=O5C65_001170;end_range=182178,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001170;partial=true DALFDA020000006.1 Protein Homology CDS 181901 182178 . + 0 ID=cds-HJH9171319.1;Parent=gene-O5C65_001170;Dbxref=NCBI_GP:HJH9171319.1;Name=HJH9171319.1;end_range=182178,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014739.1;locus_tag=O5C65_001170;partial=true;product=DUF6531 domain-containing protein;protein_id=HJH9171319.1;transl_table=11 ##sequence-region DALFDA020000007.1 1 181099 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000007.1 tpg region 1 181099 . + . ID=DALFDA020000007.1:1..181099;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000007.1 tpg gene 392 1507 . + . ID=gene-O5C65_001171;Name=iroB;gbkey=Gene;gene=iroB;gene_biotype=protein_coding;locus_tag=O5C65_001171 DALFDA020000007.1 Protein Homology CDS 392 1507 . + 0 ID=cds-HJH9171320.1;Parent=gene-O5C65_001171;Dbxref=NCBI_GP:HJH9171320.1;Name=HJH9171320.1;gbkey=CDS;gene=iroB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461700.1;locus_tag=O5C65_001171;product=salmochelin biosynthesis C-glycosyltransferase IroB;protein_id=HJH9171320.1;transl_table=11 DALFDA020000007.1 tpg gene 1588 5244 . + . ID=gene-O5C65_001172;Name=iroC;gbkey=Gene;gene=iroC;gene_biotype=protein_coding;locus_tag=O5C65_001172 DALFDA020000007.1 Protein Homology CDS 1588 5244 . + 0 ID=cds-HJH9171321.1;Parent=gene-O5C65_001172;Dbxref=NCBI_GP:HJH9171321.1;Name=HJH9171321.1;gbkey=CDS;gene=iroC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461701.1;locus_tag=O5C65_001172;product=salmochelin/enterobactin export ABC transporter IroC;protein_id=HJH9171321.1;transl_table=11 DALFDA020000007.1 tpg gene 5354 6598 . + . ID=gene-O5C65_001173;Name=O5C65_001173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001173 DALFDA020000007.1 Protein Homology CDS 5354 6598 . + 0 ID=cds-HJH9171322.1;Parent=gene-O5C65_001173;Dbxref=NCBI_GP:HJH9171322.1;Name=HJH9171322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461702.1;locus_tag=O5C65_001173;product=alpha/beta hydrolase-fold protein;protein_id=HJH9171322.1;transl_table=11 DALFDA020000007.1 tpg gene 6630 7565 . + . ID=gene-O5C65_001174;Name=O5C65_001174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001174 DALFDA020000007.1 Protein Homology CDS 6630 7565 . + 0 ID=cds-HJH9171323.1;Parent=gene-O5C65_001174;Dbxref=NCBI_GP:HJH9171323.1;Name=HJH9171323.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461703.1;locus_tag=O5C65_001174;product=alpha/beta hydrolase;protein_id=HJH9171323.1;transl_table=11 DALFDA020000007.1 tpg gene 7607 9781 . - . ID=gene-O5C65_001175;Name=O5C65_001175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001175 DALFDA020000007.1 Protein Homology CDS 7607 9781 . - 0 ID=cds-HJH9171324.1;Parent=gene-O5C65_001175;Dbxref=NCBI_GP:HJH9171324.1;Name=HJH9171324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542215.1;locus_tag=O5C65_001175;product=TonB-dependent siderophore receptor;protein_id=HJH9171324.1;transl_table=11 DALFDA020000007.1 tpg gene 10825 11877 . - . ID=gene-O5C65_001176;Name=pipB2;gbkey=Gene;gene=pipB2;gene_biotype=protein_coding;locus_tag=O5C65_001176 DALFDA020000007.1 Protein Homology CDS 10825 11877 . - 0 ID=cds-HJH9171325.1;Parent=gene-O5C65_001176;Dbxref=NCBI_GP:HJH9171325.1;Name=HJH9171325.1;gbkey=CDS;gene=pipB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461706.1;locus_tag=O5C65_001176;product=SPI-2 type III secretion system effector PipB2;protein_id=HJH9171325.1;transl_table=11 DALFDA020000007.1 tpg gene 12396 13325 . + . ID=gene-O5C65_001177;Name=O5C65_001177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001177 DALFDA020000007.1 Protein Homology CDS 12396 13325 . + 0 ID=cds-HJH9171326.1;Parent=gene-O5C65_001177;Dbxref=NCBI_GP:HJH9171326.1;Name=HJH9171326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461707.1;locus_tag=O5C65_001177;product=VirK family antimicrobial peptide resistance protein;protein_id=HJH9171326.1;transl_table=11 DALFDA020000007.1 tpg gene 13619 14515 . + . ID=gene-O5C65_001178;Name=O5C65_001178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001178 DALFDA020000007.1 Protein Homology CDS 13619 14515 . + 0 ID=cds-HJH9171327.1;Parent=gene-O5C65_001178;Dbxref=NCBI_GP:HJH9171327.1;Name=HJH9171327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461708.1;locus_tag=O5C65_001178;product=antimicrobial resistance protein Mig-14;protein_id=HJH9171327.1;transl_table=11 DALFDA020000007.1 tpg gene 15237 16250 . - . ID=gene-O5C65_001179;Name=O5C65_001179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001179 DALFDA020000007.1 Protein Homology CDS 15237 16250 . - 0 ID=cds-HJH9171328.1;Parent=gene-O5C65_001179;Dbxref=NCBI_GP:HJH9171328.1;Name=HJH9171328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461709.1;locus_tag=O5C65_001179;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=HJH9171328.1;transl_table=11 DALFDA020000007.1 tpg gene 16383 17798 . - . ID=gene-O5C65_001180;Name=O5C65_001180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001180 DALFDA020000007.1 Protein Homology CDS 16383 17798 . - 0 ID=cds-HJH9171329.1;Parent=gene-O5C65_001180;Dbxref=NCBI_GP:HJH9171329.1;Name=HJH9171329.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461710.1;locus_tag=O5C65_001180;product=sensor histidine kinase;protein_id=HJH9171329.1;transl_table=11 DALFDA020000007.1 tpg gene 17785 18459 . - . ID=gene-O5C65_001181;Name=tctD;gbkey=Gene;gene=tctD;gene_biotype=protein_coding;locus_tag=O5C65_001181 DALFDA020000007.1 Protein Homology CDS 17785 18459 . - 0 ID=cds-HJH9171330.1;Parent=gene-O5C65_001181;Dbxref=NCBI_GP:HJH9171330.1;Name=HJH9171330.1;gbkey=CDS;gene=tctD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461711.1;locus_tag=O5C65_001181;product=transcriptional regulator TctD;protein_id=HJH9171330.1;transl_table=11 DALFDA020000007.1 tpg gene 18614 19591 . + . ID=gene-O5C65_001182;Name=O5C65_001182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001182 DALFDA020000007.1 Protein Homology CDS 18614 19591 . + 0 ID=cds-HJH9171331.1;Parent=gene-O5C65_001182;Dbxref=NCBI_GP:HJH9171331.1;Name=HJH9171331.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=O5C65_001182;product=Bug family tripartite tricarboxylate transporter substrate binding protein;protein_id=HJH9171331.1;transl_table=11 DALFDA020000007.1 tpg gene 19603 20037 . + . ID=gene-O5C65_001183;Name=O5C65_001183;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001183 DALFDA020000007.1 Protein Homology CDS 19603 20037 . + 0 ID=cds-HJH9171332.1;Parent=gene-O5C65_001183;Dbxref=NCBI_GP:HJH9171332.1;Name=HJH9171332.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461713.3;locus_tag=O5C65_001183;product=tripartite tricarboxylate transporter TctB family protein;protein_id=HJH9171332.1;transl_table=11 DALFDA020000007.1 tpg gene 20048 21562 . + . ID=gene-O5C65_001184;Name=O5C65_001184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001184 DALFDA020000007.1 Protein Homology CDS 20048 21562 . + 0 ID=cds-HJH9171333.1;Parent=gene-O5C65_001184;Dbxref=NCBI_GP:HJH9171333.1;Name=HJH9171333.1;Ontology_term=GO:0006810,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461714.1;locus_tag=O5C65_001184;product=tripartite tricarboxylate transporter permease;protein_id=HJH9171333.1;transl_table=11 DALFDA020000007.1 tpg gene 21865 22842 . + . ID=gene-O5C65_001185;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=O5C65_001185 DALFDA020000007.1 Protein Homology CDS 21865 22842 . + 0 ID=cds-HJH9171334.1;Parent=gene-O5C65_001185;Dbxref=NCBI_GP:HJH9171334.1;Name=HJH9171334.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417145.4;locus_tag=O5C65_001185;product=glutarate dioxygenase GlaH;protein_id=HJH9171334.1;transl_table=11 DALFDA020000007.1 tpg gene 22868 24136 . + . ID=gene-O5C65_001186;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=O5C65_001186 DALFDA020000007.1 Protein Homology CDS 22868 24136 . + 0 ID=cds-HJH9171335.1;Parent=gene-O5C65_001186;Dbxref=NCBI_GP:HJH9171335.1;Name=HJH9171335.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461716.1;locus_tag=O5C65_001186;product=L-2-hydroxyglutarate oxidase;protein_id=HJH9171335.1;transl_table=11 DALFDA020000007.1 tpg gene 24158 25606 . + . ID=gene-O5C65_001187;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=O5C65_001187 DALFDA020000007.1 Protein Homology CDS 24158 25606 . + 0 ID=cds-HJH9171336.1;Parent=gene-O5C65_001187;Dbxref=NCBI_GP:HJH9171336.1;Name=HJH9171336.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461717.1;locus_tag=O5C65_001187;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=HJH9171336.1;transl_table=11 DALFDA020000007.1 tpg gene 25621 26904 . + . ID=gene-O5C65_001188;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=O5C65_001188 DALFDA020000007.1 Protein Homology CDS 25621 26904 . + 0 ID=cds-HJH9171337.1;Parent=gene-O5C65_001188;Dbxref=NCBI_GP:HJH9171337.1;Name=HJH9171337.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;gene=gabT;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461718.1;locus_tag=O5C65_001188;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=HJH9171337.1;transl_table=11 DALFDA020000007.1 tpg gene 27034 28434 . + . ID=gene-O5C65_001189;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=O5C65_001189 DALFDA020000007.1 Protein Homology CDS 27034 28434 . + 0 ID=cds-HJH9171338.1;Parent=gene-O5C65_001189;Dbxref=NCBI_GP:HJH9171338.1;Name=HJH9171338.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461719.1;locus_tag=O5C65_001189;product=GABA permease;protein_id=HJH9171338.1;transl_table=11 DALFDA020000007.1 tpg gene 28476 29153 . + . ID=gene-O5C65_001190;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=O5C65_001190 DALFDA020000007.1 Protein Homology CDS 28476 29153 . + 0 ID=cds-HJH9171339.1;Parent=gene-O5C65_001190;Dbxref=NCBI_GP:HJH9171339.1;Name=HJH9171339.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461720.1;locus_tag=O5C65_001190;product=DNA-binding transcriptional regulator CsiR;protein_id=HJH9171339.1;transl_table=11 DALFDA020000007.1 tpg gene 29175 29624 . - . ID=gene-O5C65_001191;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=O5C65_001191 DALFDA020000007.1 Protein Homology CDS 29175 29624 . - 0 ID=cds-HJH9171340.1;Parent=gene-O5C65_001191;Dbxref=NCBI_GP:HJH9171340.1;Name=HJH9171340.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461721.1;locus_tag=O5C65_001191;product=peptidoglycan-binding protein LysM;protein_id=HJH9171340.1;transl_table=11 DALFDA020000007.1 tpg gene 29724 29882 . - . ID=gene-O5C65_001192;Name=O5C65_001192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001192 DALFDA020000007.1 Protein Homology CDS 29724 29882 . - 0 ID=cds-HJH9171341.1;Parent=gene-O5C65_001192;Dbxref=NCBI_GP:HJH9171341.1;Name=HJH9171341.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461722.1;locus_tag=O5C65_001192;product=YqaE/Pmp3 family membrane protein;protein_id=HJH9171341.1;transl_table=11 DALFDA020000007.1 tpg gene 30065 30364 . + . ID=gene-O5C65_001193;Name=O5C65_001193;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001193 DALFDA020000007.1 Protein Homology CDS 30065 30364 . + 0 ID=cds-HJH9171342.1;Parent=gene-O5C65_001193;Dbxref=NCBI_GP:HJH9171342.1;Name=HJH9171342.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461723.1;locus_tag=O5C65_001193;product=ArsR/SmtB family transcription factor;protein_id=HJH9171342.1;transl_table=11 DALFDA020000007.1 tpg gene 30374 30901 . + . ID=gene-O5C65_001194;Name=O5C65_001194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001194 DALFDA020000007.1 Protein Homology CDS 30374 30901 . + 0 ID=cds-HJH9171343.1;Parent=gene-O5C65_001194;Dbxref=NCBI_GP:HJH9171343.1;Name=HJH9171343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461724.1;locus_tag=O5C65_001194;product=rhodanese family protein;protein_id=HJH9171343.1;transl_table=11 DALFDA020000007.1 tpg gene 30980 31159 . + . ID=gene-O5C65_001195;Name=O5C65_001195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001195 DALFDA020000007.1 Protein Homology CDS 30980 31159 . + 0 ID=cds-HJH9171344.1;Parent=gene-O5C65_001195;Dbxref=NCBI_GP:HJH9171344.1;Name=HJH9171344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494935.1;locus_tag=O5C65_001195;product=hypothetical protein;protein_id=HJH9171344.1;transl_table=11 DALFDA020000007.1 tpg gene 31249 31650 . - . ID=gene-O5C65_001196;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=O5C65_001196 DALFDA020000007.1 Protein Homology CDS 31249 31650 . - 0 ID=cds-HJH9171345.1;Parent=gene-O5C65_001196;Dbxref=NCBI_GP:HJH9171345.1;Name=HJH9171345.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461725.1;locus_tag=O5C65_001196;product=DNA-binding protein StpA;protein_id=HJH9171345.1;transl_table=11 DALFDA020000007.1 tpg gene 32549 32998 . + . ID=gene-O5C65_001197;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=O5C65_001197 DALFDA020000007.1 Protein Homology CDS 32549 32998 . + 0 ID=cds-HJH9171346.1;Parent=gene-O5C65_001197;Dbxref=NCBI_GP:HJH9171346.1;Name=HJH9171346.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461726.1;locus_tag=O5C65_001197;product=L-alanine exporter AlaE;protein_id=HJH9171346.1;transl_table=11 DALFDA020000007.1 tpg gene 33033 33383 . - . ID=gene-O5C65_001198;Name=O5C65_001198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001198 DALFDA020000007.1 Protein Homology CDS 33033 33383 . - 0 ID=cds-HJH9171347.1;Parent=gene-O5C65_001198;Dbxref=NCBI_GP:HJH9171347.1;Name=HJH9171347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461727.1;locus_tag=O5C65_001198;product=DUF2002 family protein;protein_id=HJH9171347.1;transl_table=11 DALFDA020000007.1 tpg gene 33545 33871 . + . ID=gene-O5C65_001199;Name=O5C65_001199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001199 DALFDA020000007.1 Protein Homology CDS 33545 33871 . + 0 ID=cds-HJH9171348.1;Parent=gene-O5C65_001199;Dbxref=NCBI_GP:HJH9171348.1;Name=HJH9171348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528627.1;locus_tag=O5C65_001199;product=DUF883 domain-containing protein;protein_id=HJH9171348.1;transl_table=11 DALFDA020000007.1 tpg gene 33955 35289 . - . ID=gene-O5C65_001200;Name=O5C65_001200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001200 DALFDA020000007.1 Protein Homology CDS 33955 35289 . - 0 ID=cds-HJH9171349.1;Parent=gene-O5C65_001200;Dbxref=NCBI_GP:HJH9171349.1;Name=HJH9171349.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=O5C65_001200;product=PLP-dependent aminotransferase family protein;protein_id=HJH9171349.1;transl_table=11 DALFDA020000007.1 tpg gene 35378 35809 . + . ID=gene-O5C65_001201;Name=O5C65_001201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001201 DALFDA020000007.1 Protein Homology CDS 35378 35809 . + 0 ID=cds-HJH9171350.1;Parent=gene-O5C65_001201;Dbxref=NCBI_GP:HJH9171350.1;Name=HJH9171350.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461730.1;locus_tag=O5C65_001201;product=carboxymuconolactone decarboxylase family protein;protein_id=HJH9171350.1;transl_table=11 DALFDA020000007.1 tpg gene 36081 36326 . + . ID=gene-O5C65_001202;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=O5C65_001202 DALFDA020000007.1 Protein Homology CDS 36081 36326 . + 0 ID=cds-HJH9171351.1;Parent=gene-O5C65_001202;Dbxref=NCBI_GP:HJH9171351.1;Name=HJH9171351.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461731.1;locus_tag=O5C65_001202;product=glutaredoxin-like protein NrdH;protein_id=HJH9171351.1;transl_table=11 DALFDA020000007.1 tpg gene 36323 36733 . + . ID=gene-O5C65_001203;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=O5C65_001203 DALFDA020000007.1 Protein Homology CDS 36323 36733 . + 0 ID=cds-HJH9171352.1;Parent=gene-O5C65_001203;Dbxref=NCBI_GP:HJH9171352.1;Name=HJH9171352.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461732.1;locus_tag=O5C65_001203;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=HJH9171352.1;transl_table=11 DALFDA020000007.1 tpg gene 36706 38850 . + . ID=gene-O5C65_001204;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=O5C65_001204 DALFDA020000007.1 Protein Homology CDS 36706 38850 . + 0 ID=cds-HJH9171353.1;Parent=gene-O5C65_001204;Dbxref=NCBI_GP:HJH9171353.1;Name=HJH9171353.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461733.1;locus_tag=O5C65_001204;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=HJH9171353.1;transl_table=11 DALFDA020000007.1 tpg gene 38861 39820 . + . ID=gene-O5C65_001205;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=O5C65_001205 DALFDA020000007.1 Protein Homology CDS 38861 39820 . + 0 ID=cds-HJH9171354.1;Parent=gene-O5C65_001205;Dbxref=NCBI_GP:HJH9171354.1;Name=HJH9171354.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461734.1;locus_tag=O5C65_001205;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=HJH9171354.1;transl_table=11 DALFDA020000007.1 tpg gene 40175 41377 . + . ID=gene-O5C65_001206;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=O5C65_001206 DALFDA020000007.1 Protein Homology CDS 40175 41377 . + 0 ID=cds-HJH9171355.1;Parent=gene-O5C65_001206;Dbxref=NCBI_GP:HJH9171355.1;Name=HJH9171355.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=O5C65_001206;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=HJH9171355.1;transl_table=11 DALFDA020000007.1 tpg gene 41370 42434 . + . ID=gene-O5C65_001207;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=O5C65_001207 DALFDA020000007.1 Protein Homology CDS 41370 42434 . + 0 ID=cds-HJH9171356.1;Parent=gene-O5C65_001207;Dbxref=NCBI_GP:HJH9171356.1;Name=HJH9171356.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461736.1;locus_tag=O5C65_001207;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=HJH9171356.1;transl_table=11 DALFDA020000007.1 tpg gene 42504 43499 . + . ID=gene-O5C65_001208;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=O5C65_001208 DALFDA020000007.1 Protein Homology CDS 42504 43499 . + 0 ID=cds-HJH9171357.1;Parent=gene-O5C65_001208;Dbxref=NCBI_GP:HJH9171357.1;Name=HJH9171357.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461737.1;locus_tag=O5C65_001208;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=HJH9171357.1;transl_table=11 DALFDA020000007.1 tpg gene 43664 44848 . + . ID=gene-O5C65_001209;Name=O5C65_001209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001209 DALFDA020000007.1 Protein Homology CDS 43664 44848 . + 0 ID=cds-HJH9171358.1;Parent=gene-O5C65_001209;Dbxref=NCBI_GP:HJH9171358.1;Name=HJH9171358.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461738.1;locus_tag=O5C65_001209;product=MFS transporter;protein_id=HJH9171358.1;transl_table=11 DALFDA020000007.1 tpg gene 45345 45875 . + . ID=gene-O5C65_001210;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=O5C65_001210 DALFDA020000007.1 Protein Homology CDS 45345 45875 . + 0 ID=cds-HJH9171359.1;Parent=gene-O5C65_001210;Dbxref=NCBI_GP:HJH9171359.1;Name=HJH9171359.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461739.1;locus_tag=O5C65_001210;product=transcriptional repressor MprA;protein_id=HJH9171359.1;transl_table=11 DALFDA020000007.1 tpg gene 46002 47174 . + . ID=gene-O5C65_001211;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=O5C65_001211 DALFDA020000007.1 Protein Homology CDS 46002 47174 . + 0 ID=cds-HJH9171360.1;Parent=gene-O5C65_001211;Dbxref=NCBI_GP:HJH9171360.1;Name=HJH9171360.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461740.1;locus_tag=O5C65_001211;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=HJH9171360.1;transl_table=11 DALFDA020000007.1 tpg gene 47191 48729 . + . ID=gene-O5C65_001212;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=O5C65_001212 DALFDA020000007.1 Protein Homology CDS 47191 48729 . + 0 ID=cds-HJH9171361.1;Parent=gene-O5C65_001212;Dbxref=NCBI_GP:HJH9171361.1;Name=HJH9171361.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461741.1;locus_tag=O5C65_001212;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=HJH9171361.1;transl_table=11 DALFDA020000007.1 tpg gene 48778 50148 . - . ID=gene-O5C65_001213;Name=O5C65_001213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001213 DALFDA020000007.1 Protein Homology CDS 48778 50148 . - 0 ID=cds-HJH9171362.1;Parent=gene-O5C65_001213;Dbxref=NCBI_GP:HJH9171362.1;Name=HJH9171362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461742.1;locus_tag=O5C65_001213;product=carbohydrate porin;protein_id=HJH9171362.1;transl_table=11 DALFDA020000007.1 tpg gene 50494 51009 . - . ID=gene-O5C65_001214;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=O5C65_001214 DALFDA020000007.1 Protein Homology CDS 50494 51009 . - 0 ID=cds-HJH9171363.1;Parent=gene-O5C65_001214;Dbxref=NCBI_GP:HJH9171363.1;Name=HJH9171363.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=O5C65_001214;product=S-ribosylhomocysteine lyase;protein_id=HJH9171363.1;transl_table=11 DALFDA020000007.1 tpg gene 51159 52715 . - . ID=gene-O5C65_001215;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=O5C65_001215 DALFDA020000007.1 Protein Homology CDS 51159 52715 . - 0 ID=cds-HJH9171364.1;Parent=gene-O5C65_001215;Dbxref=NCBI_GP:HJH9171364.1;Name=HJH9171364.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461744.1;locus_tag=O5C65_001215;product=glutamate--cysteine ligase;protein_id=HJH9171364.1;transl_table=11 DALFDA020000007.1 tpg gene 52792 53217 . - . ID=gene-O5C65_001216;Name=O5C65_001216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001216 DALFDA020000007.1 Protein Homology CDS 52792 53217 . - 0 ID=cds-HJH9171365.1;Parent=gene-O5C65_001216;Dbxref=NCBI_GP:HJH9171365.1;Name=HJH9171365.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461745.1;locus_tag=O5C65_001216;product=YqaA family protein;protein_id=HJH9171365.1;transl_table=11 DALFDA020000007.1 tpg gene 53214 53780 . - . ID=gene-O5C65_001217;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=O5C65_001217 DALFDA020000007.1 Protein Homology CDS 53214 53780 . - 0 ID=cds-HJH9171366.1;Parent=gene-O5C65_001217;Dbxref=NCBI_GP:HJH9171366.1;Name=HJH9171366.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461746.1;locus_tag=O5C65_001217;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=HJH9171366.1;transl_table=11 DALFDA020000007.1 tpg gene 54017 54093 . - . ID=gene-O5C65_001218;Name=O5C65_001218;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_001218 DALFDA020000007.1 tRNAscan-SE tRNA 54017 54093 . - . ID=rna-O5C65_001218;Parent=gene-O5C65_001218;anticodon=(pos:complement(54057..54059));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_001218;product=tRNA-Arg DALFDA020000007.1 tRNAscan-SE exon 54017 54093 . - . ID=exon-O5C65_001218-1;Parent=rna-O5C65_001218;anticodon=(pos:complement(54057..54059));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_001218;product=tRNA-Arg DALFDA020000007.1 tpg gene 54287 54363 . - . ID=gene-O5C65_001219;Name=O5C65_001219;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_001219 DALFDA020000007.1 tRNAscan-SE tRNA 54287 54363 . - . ID=rna-O5C65_001219;Parent=gene-O5C65_001219;anticodon=(pos:complement(54327..54329));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_001219;product=tRNA-Arg DALFDA020000007.1 tRNAscan-SE exon 54287 54363 . - . ID=exon-O5C65_001219-1;Parent=rna-O5C65_001219;anticodon=(pos:complement(54327..54329));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_001219;product=tRNA-Arg DALFDA020000007.1 tpg gene 54426 54502 . - . ID=gene-O5C65_001220;Name=O5C65_001220;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_001220 DALFDA020000007.1 tRNAscan-SE tRNA 54426 54502 . - . ID=rna-O5C65_001220;Parent=gene-O5C65_001220;anticodon=(pos:complement(54466..54468));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_001220;product=tRNA-Arg DALFDA020000007.1 tRNAscan-SE exon 54426 54502 . - . ID=exon-O5C65_001220-1;Parent=rna-O5C65_001220;anticodon=(pos:complement(54466..54468));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_001220;product=tRNA-Arg DALFDA020000007.1 tpg gene 54564 54640 . - . ID=gene-O5C65_001221;Name=O5C65_001221;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_001221 DALFDA020000007.1 tRNAscan-SE tRNA 54564 54640 . - . ID=rna-O5C65_001221;Parent=gene-O5C65_001221;anticodon=(pos:complement(54604..54606));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_001221;product=tRNA-Arg DALFDA020000007.1 tRNAscan-SE exon 54564 54640 . - . ID=exon-O5C65_001221-1;Parent=rna-O5C65_001221;anticodon=(pos:complement(54604..54606));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_001221;product=tRNA-Arg DALFDA020000007.1 tpg gene 54644 54736 . - . ID=gene-O5C65_001222;Name=O5C65_001222;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_001222 DALFDA020000007.1 tRNAscan-SE tRNA 54644 54736 . - . ID=rna-O5C65_001222;Parent=gene-O5C65_001222;anticodon=(pos:complement(54700..54702));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_001222;product=tRNA-Ser DALFDA020000007.1 tRNAscan-SE exon 54644 54736 . - . ID=exon-O5C65_001222-1;Parent=rna-O5C65_001222;anticodon=(pos:complement(54700..54702));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_001222;product=tRNA-Ser DALFDA020000007.1 tpg gene 55040 55225 . - . ID=gene-O5C65_001223;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=O5C65_001223 DALFDA020000007.1 Protein Homology CDS 55040 55225 . - 0 ID=cds-HJH9171367.1;Parent=gene-O5C65_001223;Dbxref=NCBI_GP:HJH9171367.1;Name=HJH9171367.1;Ontology_term=GO:0006109,GO:0006402,GO:0003723;gbkey=CDS;gene=csrA;go_function=RNA binding|0003723||IEA;go_process=regulation of carbohydrate metabolic process|0006109||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=O5C65_001223;product=carbon storage regulator CsrA;protein_id=HJH9171367.1;transl_table=11 DALFDA020000007.1 tpg gene 55460 58090 . - . ID=gene-O5C65_001224;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=O5C65_001224 DALFDA020000007.1 Protein Homology CDS 55460 58090 . - 0 ID=cds-HJH9171368.1;Parent=gene-O5C65_001224;Dbxref=NCBI_GP:HJH9171368.1;Name=HJH9171368.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461748.1;locus_tag=O5C65_001224;product=alanine--tRNA ligase;protein_id=HJH9171368.1;transl_table=11 DALFDA020000007.1 tpg gene 58326 58826 . - . ID=gene-O5C65_001225;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=O5C65_001225 DALFDA020000007.1 Protein Homology CDS 58326 58826 . - 0 ID=cds-HJH9171369.1;Parent=gene-O5C65_001225;Dbxref=NCBI_GP:HJH9171369.1;Name=HJH9171369.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461749.1;locus_tag=O5C65_001225;product=recombination regulator RecX;protein_id=HJH9171369.1;transl_table=11 DALFDA020000007.1 tpg gene 58943 60004 . - . ID=gene-O5C65_001226;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=O5C65_001226 DALFDA020000007.1 Protein Homology CDS 58943 60004 . - 0 ID=cds-HJH9171370.1;Parent=gene-O5C65_001226;Dbxref=NCBI_GP:HJH9171370.1;Name=HJH9171370.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461750.1;locus_tag=O5C65_001226;product=recombinase RecA;protein_id=HJH9171370.1;transl_table=11 DALFDA020000007.1 tpg gene 60089 60586 . - . ID=gene-O5C65_001227;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=O5C65_001227 DALFDA020000007.1 Protein Homology CDS 60089 60586 . - 0 ID=cds-HJH9171371.1;Parent=gene-O5C65_001227;Dbxref=NCBI_GP:HJH9171371.1;Name=HJH9171371.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461751.1;locus_tag=O5C65_001227;product=nicotinamide-nucleotide amidase;protein_id=HJH9171371.1;transl_table=11 DALFDA020000007.1 tpg gene 60782 61027 . + . ID=gene-O5C65_001228;Name=O5C65_001228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001228 DALFDA020000007.1 Protein Homology CDS 60782 61027 . + 0 ID=cds-HJH9171372.1;Parent=gene-O5C65_001228;Dbxref=NCBI_GP:HJH9171372.1;Name=HJH9171372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053775.1;locus_tag=O5C65_001228;product=hypothetical protein;protein_id=HJH9171372.1;transl_table=11 DALFDA020000007.1 tpg gene 61065 62144 . - . ID=gene-O5C65_001229;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=O5C65_001229 DALFDA020000007.1 Protein Homology CDS 61065 62144 . - 0 ID=cds-HJH9171373.1;Parent=gene-O5C65_001229;Dbxref=NCBI_GP:HJH9171373.1;Name=HJH9171373.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461752.1;locus_tag=O5C65_001229;product=lytic murein transglycosylase B;protein_id=HJH9171373.1;transl_table=11 DALFDA020000007.1 tpg gene 62397 62960 . + . ID=gene-O5C65_001230;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=O5C65_001230 DALFDA020000007.1 Protein Homology CDS 62397 62960 . + 0 ID=cds-HJH9171374.1;Parent=gene-O5C65_001230;Dbxref=NCBI_GP:HJH9171374.1;Name=HJH9171374.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461753.1;locus_tag=O5C65_001230;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=HJH9171374.1;transl_table=11 DALFDA020000007.1 tpg gene 62957 63928 . + . ID=gene-O5C65_001231;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=O5C65_001231 DALFDA020000007.1 Protein Homology CDS 62957 63928 . + 0 ID=cds-HJH9171375.1;Parent=gene-O5C65_001231;Dbxref=NCBI_GP:HJH9171375.1;Name=HJH9171375.1;Ontology_term=GO:0009401,GO:0015795,GO:0008982,GO:0016301;gbkey=CDS;gene=srlE;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461754.1;locus_tag=O5C65_001231;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=HJH9171375.1;transl_table=11 DALFDA020000007.1 tpg gene 63940 64302 . + . ID=gene-O5C65_001232;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=O5C65_001232 DALFDA020000007.1 Protein Homology CDS 63940 64302 . + 0 ID=cds-HJH9171376.1;Parent=gene-O5C65_001232;Dbxref=NCBI_GP:HJH9171376.1;Name=HJH9171376.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461755.1;locus_tag=O5C65_001232;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=HJH9171376.1;transl_table=11 DALFDA020000007.1 tpg gene 64314 65093 . + . ID=gene-O5C65_001233;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=O5C65_001233 DALFDA020000007.1 Protein Homology CDS 64314 65093 . + 0 ID=cds-HJH9171377.1;Parent=gene-O5C65_001233;Dbxref=NCBI_GP:HJH9171377.1;Name=HJH9171377.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461756.1;locus_tag=O5C65_001233;product=sorbitol-6-phosphate dehydrogenase;protein_id=HJH9171377.1;transl_table=11 DALFDA020000007.1 tpg gene 65170 65529 . + . ID=gene-O5C65_001234;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=O5C65_001234 DALFDA020000007.1 Protein Homology CDS 65170 65529 . + 0 ID=cds-HJH9171378.1;Parent=gene-O5C65_001234;Dbxref=NCBI_GP:HJH9171378.1;Name=HJH9171378.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461757.1;locus_tag=O5C65_001234;product=transcriptional regulator GutM;protein_id=HJH9171378.1;transl_table=11 DALFDA020000007.1 tpg gene 65727 66500 . + . ID=gene-O5C65_001235;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=O5C65_001235 DALFDA020000007.1 Protein Homology CDS 65727 66500 . + 0 ID=cds-HJH9171379.1;Parent=gene-O5C65_001235;Dbxref=NCBI_GP:HJH9171379.1;Name=HJH9171379.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=srlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461758.1;locus_tag=O5C65_001235;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=HJH9171379.1;transl_table=11 DALFDA020000007.1 tpg gene 66493 67458 . + . ID=gene-O5C65_001236;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=O5C65_001236 DALFDA020000007.1 Protein Homology CDS 66493 67458 . + 0 ID=cds-HJH9171380.1;Parent=gene-O5C65_001236;Dbxref=NCBI_GP:HJH9171380.1;Name=HJH9171380.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=O5C65_001236;product=arabinose-5-phosphate isomerase GutQ;protein_id=HJH9171380.1;transl_table=11 DALFDA020000007.1 tpg gene 67455 68975 . - . ID=gene-O5C65_001237;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=O5C65_001237 DALFDA020000007.1 Protein Homology CDS 67455 68975 . - 0 ID=cds-HJH9171381.1;Parent=gene-O5C65_001237;Dbxref=NCBI_GP:HJH9171381.1;Name=HJH9171381.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461760.1;locus_tag=O5C65_001237;product=nitric oxide reductase transcriptional regulator NorR;protein_id=HJH9171381.1;transl_table=11 DALFDA020000007.1 tpg gene 69161 70600 . + . ID=gene-O5C65_001238;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=O5C65_001238 DALFDA020000007.1 Protein Homology CDS 69161 70600 . + 0 ID=cds-HJH9171382.1;Parent=gene-O5C65_001238;Dbxref=NCBI_GP:HJH9171382.1;Name=HJH9171382.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461761.1;locus_tag=O5C65_001238;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=HJH9171382.1;transl_table=11 DALFDA020000007.1 tpg gene 70597 71730 . + . ID=gene-O5C65_001239;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=O5C65_001239 DALFDA020000007.1 Protein Homology CDS 70597 71730 . + 0 ID=cds-HJH9171383.1;Parent=gene-O5C65_001239;Dbxref=NCBI_GP:HJH9171383.1;Name=HJH9171383.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461762.1;locus_tag=O5C65_001239;product=NADH:flavorubredoxin reductase NorW;protein_id=HJH9171383.1;transl_table=11 DALFDA020000007.1 tpg gene 71827 74067 . - . ID=gene-O5C65_001240;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=O5C65_001240 DALFDA020000007.1 Protein Homology CDS 71827 74067 . - 0 ID=cds-HJH9171384.1;Parent=gene-O5C65_001240;Dbxref=NCBI_GP:HJH9171384.1;Name=HJH9171384.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461763.1;locus_tag=O5C65_001240;product=carbamoyltransferase HypF;protein_id=HJH9171384.1;transl_table=11 DALFDA020000007.1 tpg gene 74213 74758 . - . ID=gene-O5C65_001241;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=O5C65_001241 DALFDA020000007.1 Protein Homology CDS 74213 74758 . - 0 ID=cds-HJH9171385.1;Parent=gene-O5C65_001241;Dbxref=NCBI_GP:HJH9171385.1;Name=HJH9171385.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461764.1;locus_tag=O5C65_001241;product=electron transport protein HydN;protein_id=HJH9171385.1;transl_table=11 DALFDA020000007.1 tpg gene 74959 75768 . - . ID=gene-O5C65_001242;Name=O5C65_001242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001242 DALFDA020000007.1 Protein Homology CDS 74959 75768 . - 0 ID=cds-HJH9171386.1;Parent=gene-O5C65_001242;Dbxref=NCBI_GP:HJH9171386.1;Name=HJH9171386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461765.1;locus_tag=O5C65_001242;product=hypothetical protein;protein_id=HJH9171386.1;transl_table=11 DALFDA020000007.1 tpg gene 75795 76265 . - . ID=gene-O5C65_001243;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=O5C65_001243 DALFDA020000007.1 Protein Homology CDS 75795 76265 . - 0 ID=cds-HJH9171387.1;Parent=gene-O5C65_001243;Dbxref=NCBI_GP:HJH9171387.1;Name=HJH9171387.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461766.1;locus_tag=O5C65_001243;product=hydrogenase maturation peptidase HycI;protein_id=HJH9171387.1;transl_table=11 DALFDA020000007.1 tpg gene 76258 76668 . - . ID=gene-O5C65_001244;Name=O5C65_001244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001244 DALFDA020000007.1 Protein Homology CDS 76258 76668 . - 0 ID=cds-HJH9171388.1;Parent=gene-O5C65_001244;Dbxref=NCBI_GP:HJH9171388.1;Name=HJH9171388.1;Ontology_term=GO:0065003;gbkey=CDS;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461767.1;locus_tag=O5C65_001244;product=formate hydrogenlyase maturation HycH family protein;protein_id=HJH9171388.1;transl_table=11 DALFDA020000007.1 tpg gene 76665 77432 . - . ID=gene-O5C65_001245;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=O5C65_001245 DALFDA020000007.1 Protein Homology CDS 76665 77432 . - 0 ID=cds-HJH9171389.1;Parent=gene-O5C65_001245;Dbxref=NCBI_GP:HJH9171389.1;Name=HJH9171389.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461768.1;locus_tag=O5C65_001245;product=formate hydrogenlyase subunit HycG;protein_id=HJH9171389.1;transl_table=11 DALFDA020000007.1 tpg gene 77432 77974 . - . ID=gene-O5C65_001246;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=O5C65_001246 DALFDA020000007.1 Protein Homology CDS 77432 77974 . - 0 ID=cds-HJH9171390.1;Parent=gene-O5C65_001246;Dbxref=NCBI_GP:HJH9171390.1;Name=HJH9171390.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461769.1;locus_tag=O5C65_001246;product=formate hydrogenlyase subunit HycF;protein_id=HJH9171390.1;transl_table=11 DALFDA020000007.1 tpg gene 77984 79693 . - . ID=gene-O5C65_001247;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=O5C65_001247 DALFDA020000007.1 Protein Homology CDS 77984 79693 . - 0 ID=cds-HJH9171391.1;Parent=gene-O5C65_001247;Dbxref=NCBI_GP:HJH9171391.1;Name=HJH9171391.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=O5C65_001247;product=formate hydrogenlyase subunit HycE;protein_id=HJH9171391.1;transl_table=11 DALFDA020000007.1 tpg gene 79711 80634 . - . ID=gene-O5C65_001248;Name=O5C65_001248;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001248 DALFDA020000007.1 Protein Homology CDS 79711 80634 . - 0 ID=cds-HJH9171392.1;Parent=gene-O5C65_001248;Dbxref=NCBI_GP:HJH9171392.1;Name=HJH9171392.1;Ontology_term=GO:0022900,GO:0016491,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=oxidoreductase activity|0016491||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461771.1;locus_tag=O5C65_001248;product=respiratory chain complex I subunit 1 family protein;protein_id=HJH9171392.1;transl_table=11 DALFDA020000007.1 tpg gene 80637 82463 . - . ID=gene-O5C65_001249;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=O5C65_001249 DALFDA020000007.1 Protein Homology CDS 80637 82463 . - 0 ID=cds-HJH9171393.1;Parent=gene-O5C65_001249;Dbxref=NCBI_GP:HJH9171393.1;Name=HJH9171393.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461772.2;locus_tag=O5C65_001249;product=formate hydrogenlyase subunit 3;protein_id=HJH9171393.1;transl_table=11 DALFDA020000007.1 tpg gene 82463 83071 . - . ID=gene-O5C65_001250;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=O5C65_001250 DALFDA020000007.1 Protein Homology CDS 82463 83071 . - 0 ID=cds-HJH9171394.1;Parent=gene-O5C65_001250;Dbxref=NCBI_GP:HJH9171394.1;Name=HJH9171394.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461773.1;locus_tag=O5C65_001250;product=formate hydrogenlyase subunit HycB;protein_id=HJH9171394.1;transl_table=11 DALFDA020000007.1 tpg gene 83217 83678 . - . ID=gene-O5C65_001251;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=O5C65_001251 DALFDA020000007.1 Protein Homology CDS 83217 83678 . - 0 ID=cds-HJH9171395.1;Parent=gene-O5C65_001251;Dbxref=NCBI_GP:HJH9171395.1;Name=HJH9171395.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461774.1;locus_tag=O5C65_001251;product=formate hydrogenlyase regulator HycA;protein_id=HJH9171395.1;transl_table=11 DALFDA020000007.1 tpg gene 83888 84244 . + . ID=gene-O5C65_001252;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=O5C65_001252 DALFDA020000007.1 Protein Homology CDS 83888 84244 . + 0 ID=cds-HJH9171396.1;Parent=gene-O5C65_001252;Dbxref=NCBI_GP:HJH9171396.1;Name=HJH9171396.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461775.1;locus_tag=O5C65_001252;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=HJH9171396.1;transl_table=11 DALFDA020000007.1 tpg gene 84313 85185 . + . ID=gene-O5C65_001253;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=O5C65_001253 DALFDA020000007.1 Protein Homology CDS 84313 85185 . + 0 ID=cds-HJH9171397.1;Parent=gene-O5C65_001253;Dbxref=NCBI_GP:HJH9171397.1;Name=HJH9171397.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461776.1;locus_tag=O5C65_001253;product=hydrogenase nickel incorporation protein HypB;protein_id=HJH9171397.1;transl_table=11 DALFDA020000007.1 tpg gene 85176 85448 . + . ID=gene-O5C65_001254;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=O5C65_001254 DALFDA020000007.1 Protein Homology CDS 85176 85448 . + 0 ID=cds-HJH9171398.1;Parent=gene-O5C65_001254;Dbxref=NCBI_GP:HJH9171398.1;Name=HJH9171398.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461777.1;locus_tag=O5C65_001254;product=hydrogenase 3 maturation protein HypC;protein_id=HJH9171398.1;transl_table=11 DALFDA020000007.1 tpg gene 85448 86569 . + . ID=gene-O5C65_001255;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=O5C65_001255 DALFDA020000007.1 Protein Homology CDS 85448 86569 . + 0 ID=cds-HJH9171399.1;Parent=gene-O5C65_001255;Dbxref=NCBI_GP:HJH9171399.1;Name=HJH9171399.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461778.2;locus_tag=O5C65_001255;product=hydrogenase formation protein HypD;protein_id=HJH9171399.1;transl_table=11 DALFDA020000007.1 tpg gene 86566 87576 . + . ID=gene-O5C65_001256;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=O5C65_001256 DALFDA020000007.1 Protein Homology CDS 86566 87576 . + 0 ID=cds-HJH9171400.1;Parent=gene-O5C65_001256;Dbxref=NCBI_GP:HJH9171400.1;Name=HJH9171400.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=O5C65_001256;product=hydrogenase expression/formation protein HypE;protein_id=HJH9171400.1;transl_table=11 DALFDA020000007.1 tpg gene 87795 89873 . + . ID=gene-O5C65_001257;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=O5C65_001257 DALFDA020000007.1 Protein Homology CDS 87795 89873 . + 0 ID=cds-HJH9171401.1;Parent=gene-O5C65_001257;Dbxref=NCBI_GP:HJH9171401.1;Name=HJH9171401.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461780.1;locus_tag=O5C65_001257;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=HJH9171401.1;transl_table=11 DALFDA020000007.1 tpg gene 89935 90279 . - . ID=gene-O5C65_001258;Name=O5C65_001258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001258 DALFDA020000007.1 Protein Homology CDS 89935 90279 . - 0 ID=cds-HJH9171402.1;Parent=gene-O5C65_001258;Dbxref=NCBI_GP:HJH9171402.1;Name=HJH9171402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461781.1;locus_tag=O5C65_001258;product=nitrous oxide-stimulated promoter family protein;protein_id=HJH9171402.1;transl_table=11 DALFDA020000007.1 tpg gene 90461 91378 . + . ID=gene-O5C65_001259;Name=sitA;gbkey=Gene;gene=sitA;gene_biotype=protein_coding;locus_tag=O5C65_001259 DALFDA020000007.1 Protein Homology CDS 90461 91378 . + 0 ID=cds-HJH9171403.1;Parent=gene-O5C65_001259;Dbxref=NCBI_GP:HJH9171403.1;Name=HJH9171403.1;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461782.1;locus_tag=O5C65_001259;product=iron/manganese ABC transporter substrate-binding protein SitA;protein_id=HJH9171403.1;transl_table=11 DALFDA020000007.1 tpg gene 91375 92196 . + . ID=gene-O5C65_001260;Name=sitB;gbkey=Gene;gene=sitB;gene_biotype=protein_coding;locus_tag=O5C65_001260 DALFDA020000007.1 Protein Homology CDS 91375 92196 . + 0 ID=cds-HJH9171404.1;Parent=gene-O5C65_001260;Dbxref=NCBI_GP:HJH9171404.1;Name=HJH9171404.1;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461783.1;locus_tag=O5C65_001260;product=iron/manganese ABC transporter ATP-binding protein SitB;protein_id=HJH9171404.1;transl_table=11 DALFDA020000007.1 tpg gene 92193 93053 . + . ID=gene-O5C65_001261;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=O5C65_001261 DALFDA020000007.1 Protein Homology CDS 92193 93053 . + 0 ID=cds-HJH9171405.1;Parent=gene-O5C65_001261;Dbxref=NCBI_GP:HJH9171405.1;Name=HJH9171405.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461784.1;locus_tag=O5C65_001261;product=iron/manganese ABC transporter permease subunit SitC;protein_id=HJH9171405.1;transl_table=11 DALFDA020000007.1 tpg gene 93044 93892 . + . ID=gene-O5C65_001262;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=protein_coding;locus_tag=O5C65_001262 DALFDA020000007.1 Protein Homology CDS 93044 93892 . + 0 ID=cds-HJH9171406.1;Parent=gene-O5C65_001262;Dbxref=NCBI_GP:HJH9171406.1;Name=HJH9171406.1;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461785.1;locus_tag=O5C65_001262;product=iron/manganese ABC transporter permease subunit SitD;protein_id=HJH9171406.1;transl_table=11 DALFDA020000007.1 tpg gene 93991 94899 . - . ID=gene-O5C65_001263;Name=avrA;gbkey=Gene;gene=avrA;gene_biotype=protein_coding;locus_tag=O5C65_001263 DALFDA020000007.1 Protein Homology CDS 93991 94899 . - 0 ID=cds-HJH9171407.1;Parent=gene-O5C65_001263;Dbxref=NCBI_GP:HJH9171407.1;Name=HJH9171407.1;gbkey=CDS;gene=avrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461786.1;locus_tag=O5C65_001263;product=type III secretion system YopJ family effector AvrA;protein_id=HJH9171407.1;transl_table=11 DALFDA020000007.1 tpg gene 95060 95815 . - . ID=gene-O5C65_001264;Name=sprB;gbkey=Gene;gene=sprB;gene_biotype=protein_coding;locus_tag=O5C65_001264 DALFDA020000007.1 Protein Homology CDS 95060 95815 . - 0 ID=cds-HJH9171408.1;Parent=gene-O5C65_001264;Dbxref=NCBI_GP:HJH9171408.1;Name=HJH9171408.1;gbkey=CDS;gene=sprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461787.1;locus_tag=O5C65_001264;product=transcriptional regulator SprB;protein_id=HJH9171408.1;transl_table=11 DALFDA020000007.1 tpg gene 96200 97087 . - . ID=gene-O5C65_001265;Name=hilC;gbkey=Gene;gene=hilC;gene_biotype=protein_coding;locus_tag=O5C65_001265 DALFDA020000007.1 Protein Homology CDS 96200 97087 . - 0 ID=cds-HJH9171409.1;Parent=gene-O5C65_001265;Dbxref=NCBI_GP:HJH9171409.1;Name=HJH9171409.1;gbkey=CDS;gene=hilC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461788.1;locus_tag=O5C65_001265;product=invasion transcriptional regulator HilC;protein_id=HJH9171409.1;transl_table=11 DALFDA020000007.1 tpg gene 97423 97875 . - . ID=gene-O5C65_001266;Name=O5C65_001266;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001266 DALFDA020000007.1 Protein Homology CDS 97423 97875 . - 0 ID=cds-HJH9171410.1;Parent=gene-O5C65_001266;Dbxref=NCBI_GP:HJH9171410.1;Name=HJH9171410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461789.1;locus_tag=O5C65_001266;product=type III secretion system effector protein OrgC;protein_id=HJH9171410.1;transl_table=11 DALFDA020000007.1 tpg gene 97872 98552 . - . ID=gene-O5C65_001267;Name=orgB;gbkey=Gene;gene=orgB;gene_biotype=protein_coding;locus_tag=O5C65_001267 DALFDA020000007.1 Protein Homology CDS 97872 98552 . - 0 ID=cds-HJH9171411.1;Parent=gene-O5C65_001267;Dbxref=NCBI_GP:HJH9171411.1;Name=HJH9171411.1;gbkey=CDS;gene=orgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461790.1;locus_tag=O5C65_001267;product=type III secretion system linker protein OrgB;protein_id=HJH9171411.1;transl_table=11 DALFDA020000007.1 tpg gene 98509 99108 . - . ID=gene-O5C65_001268;Name=orgA;gbkey=Gene;gene=orgA;gene_biotype=protein_coding;locus_tag=O5C65_001268 DALFDA020000007.1 Protein Homology CDS 98509 99108 . - 0 ID=cds-HJH9171412.1;Parent=gene-O5C65_001268;Dbxref=NCBI_GP:HJH9171412.1;Name=HJH9171412.1;gbkey=CDS;gene=orgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461791.1;locus_tag=O5C65_001268;product=oxygen-regulated invasion protein OrgA;protein_id=HJH9171412.1;transl_table=11 DALFDA020000007.1 tpg gene 99080 99838 . - . ID=gene-O5C65_001269;Name=prgK;gbkey=Gene;gene=prgK;gene_biotype=protein_coding;locus_tag=O5C65_001269 DALFDA020000007.1 Protein Homology CDS 99080 99838 . - 0 ID=cds-HJH9171413.1;Parent=gene-O5C65_001269;Dbxref=NCBI_GP:HJH9171413.1;Name=HJH9171413.1;gbkey=CDS;gene=prgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461792.1;locus_tag=O5C65_001269;product=type III secretion system inner membrane ring lipoprotein PrgK;protein_id=HJH9171413.1;transl_table=11 DALFDA020000007.1 tpg gene 99835 100140 . - . ID=gene-O5C65_001270;Name=prgJ;gbkey=Gene;gene=prgJ;gene_biotype=protein_coding;locus_tag=O5C65_001270 DALFDA020000007.1 Protein Homology CDS 99835 100140 . - 0 ID=cds-HJH9171414.1;Parent=gene-O5C65_001270;Dbxref=NCBI_GP:HJH9171414.1;Name=HJH9171414.1;gbkey=CDS;gene=prgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461793.1;locus_tag=O5C65_001270;product=type III secretion system inner rod protein PrgJ;protein_id=HJH9171414.1;transl_table=11 DALFDA020000007.1 tpg gene 100159 100401 . - . ID=gene-O5C65_001271;Name=O5C65_001271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001271 DALFDA020000007.1 Protein Homology CDS 100159 100401 . - 0 ID=cds-HJH9171415.1;Parent=gene-O5C65_001271;Dbxref=NCBI_GP:HJH9171415.1;Name=HJH9171415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461794.1;locus_tag=O5C65_001271;product=type III secretion system needle complex protein;protein_id=HJH9171415.1;transl_table=11 DALFDA020000007.1 tpg gene 100426 101604 . - . ID=gene-O5C65_001272;Name=prgH;gbkey=Gene;gene=prgH;gene_biotype=protein_coding;locus_tag=O5C65_001272 DALFDA020000007.1 Protein Homology CDS 100426 101604 . - 0 ID=cds-HJH9171416.1;Parent=gene-O5C65_001272;Dbxref=NCBI_GP:HJH9171416.1;Name=HJH9171416.1;gbkey=CDS;gene=prgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461795.1;locus_tag=O5C65_001272;product=type III secretion system inner membrane ring protein PrgH;protein_id=HJH9171416.1;transl_table=11 DALFDA020000007.1 tpg gene 101920 102849 . + . ID=gene-O5C65_001273;Name=hilD;gbkey=Gene;gene=hilD;gene_biotype=protein_coding;locus_tag=O5C65_001273 DALFDA020000007.1 Protein Homology CDS 101920 102849 . + 0 ID=cds-HJH9171417.1;Parent=gene-O5C65_001273;Dbxref=NCBI_GP:HJH9171417.1;Name=HJH9171417.1;gbkey=CDS;gene=hilD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461796.1;locus_tag=O5C65_001273;product=transcriptional regulator HilD;protein_id=HJH9171417.1;transl_table=11 DALFDA020000007.1 tpg gene 103939 105600 . + . ID=gene-O5C65_001274;Name=hilA;gbkey=Gene;gene=hilA;gene_biotype=protein_coding;locus_tag=O5C65_001274 DALFDA020000007.1 Protein Homology CDS 103939 105600 . + 0 ID=cds-HJH9171418.1;Parent=gene-O5C65_001274;Dbxref=NCBI_GP:HJH9171418.1;Name=HJH9171418.1;gbkey=CDS;gene=hilA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461797.1;locus_tag=O5C65_001274;product=transcriptional regulator HilA;protein_id=HJH9171418.1;transl_table=11 DALFDA020000007.1 tpg gene 105618 106100 . + . ID=gene-O5C65_001275;Name=iagB;gbkey=Gene;gene=iagB;gene_biotype=protein_coding;locus_tag=O5C65_001275 DALFDA020000007.1 Protein Homology CDS 105618 106100 . + 0 ID=cds-HJH9171419.1;Parent=gene-O5C65_001275;Dbxref=NCBI_GP:HJH9171419.1;Name=HJH9171419.1;gbkey=CDS;gene=iagB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461798.1;locus_tag=O5C65_001275;product=SPI-1 type III secretion system invasion protein IagB;protein_id=HJH9171419.1;transl_table=11 DALFDA020000007.1 tpg gene 106154 107785 . - . ID=gene-O5C65_001276;Name=sptP;gbkey=Gene;gene=sptP;gene_biotype=protein_coding;locus_tag=O5C65_001276 DALFDA020000007.1 Protein Homology CDS 106154 107785 . - 0 ID=cds-HJH9171420.1;Parent=gene-O5C65_001276;Dbxref=NCBI_GP:HJH9171420.1;Name=HJH9171420.1;gbkey=CDS;gene=sptP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461799.1;locus_tag=O5C65_001276;product=SPI-1 type III secretion system effector GTPase-activating protein SptP;protein_id=HJH9171420.1;transl_table=11 DALFDA020000007.1 tpg gene 107772 108164 . - . ID=gene-O5C65_001277;Name=sicP;gbkey=Gene;gene=sicP;gene_biotype=protein_coding;locus_tag=O5C65_001277 DALFDA020000007.1 Protein Homology CDS 107772 108164 . - 0 ID=cds-HJH9171421.1;Parent=gene-O5C65_001277;Dbxref=NCBI_GP:HJH9171421.1;Name=HJH9171421.1;gbkey=CDS;gene=sicP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461800.1;locus_tag=O5C65_001277;product=chaperone SicP;protein_id=HJH9171421.1;transl_table=11 DALFDA020000007.1 tpg gene 108191 108451 . - . ID=gene-O5C65_001278;Name=O5C65_001278;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001278 DALFDA020000007.1 Protein Homology CDS 108191 108451 . - 0 ID=cds-HJH9171422.1;Parent=gene-O5C65_001278;Dbxref=NCBI_GP:HJH9171422.1;Name=HJH9171422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449260.1;locus_tag=O5C65_001278;product=hypothetical protein;protein_id=HJH9171422.1;transl_table=11 DALFDA020000007.1 tpg gene 108495 108743 . - . ID=gene-O5C65_001279;Name=O5C65_001279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001279 DALFDA020000007.1 Protein Homology CDS 108495 108743 . - 0 ID=cds-HJH9171423.1;Parent=gene-O5C65_001279;Dbxref=NCBI_GP:HJH9171423.1;Name=HJH9171423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461802.1;locus_tag=O5C65_001279;product=acyl carrier protein;protein_id=HJH9171423.1;transl_table=11 DALFDA020000007.1 tpg gene 108762 110819 . - . ID=gene-O5C65_001280;Name=sipA;gbkey=Gene;gene=sipA;gene_biotype=protein_coding;locus_tag=O5C65_001280 DALFDA020000007.1 Protein Homology CDS 108762 110819 . - 0 ID=cds-HJH9171424.1;Parent=gene-O5C65_001280;Dbxref=NCBI_GP:HJH9171424.1;Name=HJH9171424.1;gbkey=CDS;gene=sipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461803.1;locus_tag=O5C65_001280;product=SPI-1 type III secretion system effector SipA;protein_id=HJH9171424.1;transl_table=11 DALFDA020000007.1 tpg gene 110838 111869 . - . ID=gene-O5C65_001281;Name=sipD;gbkey=Gene;gene=sipD;gene_biotype=protein_coding;locus_tag=O5C65_001281 DALFDA020000007.1 Protein Homology CDS 110838 111869 . - 0 ID=cds-HJH9171425.1;Parent=gene-O5C65_001281;Dbxref=NCBI_GP:HJH9171425.1;Name=HJH9171425.1;gbkey=CDS;gene=sipD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461804.1;locus_tag=O5C65_001281;product=SPI-1 type III secretion system needle tip complex protein SipD;protein_id=HJH9171425.1;transl_table=11 DALFDA020000007.1 tpg gene 111940 113169 . - . ID=gene-O5C65_001282;Name=sipC;gbkey=Gene;gene=sipC;gene_biotype=protein_coding;locus_tag=O5C65_001282 DALFDA020000007.1 Protein Homology CDS 111940 113169 . - 0 ID=cds-HJH9171426.1;Parent=gene-O5C65_001282;Dbxref=NCBI_GP:HJH9171426.1;Name=HJH9171426.1;gbkey=CDS;gene=sipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461805.1;locus_tag=O5C65_001282;product=SPI-1 type III secretion system needle tip complex protein SipC;protein_id=HJH9171426.1;transl_table=11 DALFDA020000007.1 tpg gene 113197 114978 . - . ID=gene-O5C65_001283;Name=sipB;gbkey=Gene;gene=sipB;gene_biotype=protein_coding;locus_tag=O5C65_001283 DALFDA020000007.1 Protein Homology CDS 113197 114978 . - 0 ID=cds-HJH9171427.1;Parent=gene-O5C65_001283;Dbxref=NCBI_GP:HJH9171427.1;Name=HJH9171427.1;gbkey=CDS;gene=sipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461806.1;locus_tag=O5C65_001283;product=SPI-1 type III secretion system needle tip complex protein SipB;protein_id=HJH9171427.1;transl_table=11 DALFDA020000007.1 tpg gene 114981 115478 . - . ID=gene-O5C65_001284;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=protein_coding;locus_tag=O5C65_001284 DALFDA020000007.1 Protein Homology CDS 114981 115478 . - 0 ID=cds-HJH9171428.1;Parent=gene-O5C65_001284;Dbxref=NCBI_GP:HJH9171428.1;Name=HJH9171428.1;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461807.1;locus_tag=O5C65_001284;product=SycD/LcrH family type III secretion system chaperone SicA;protein_id=HJH9171428.1;transl_table=11 DALFDA020000007.1 tpg gene 115616 116686 . - . ID=gene-O5C65_001285;Name=spaS;gbkey=Gene;gene=spaS;gene_biotype=protein_coding;locus_tag=O5C65_001285 DALFDA020000007.1 Protein Homology CDS 115616 116686 . - 0 ID=cds-HJH9171429.1;Parent=gene-O5C65_001285;Dbxref=NCBI_GP:HJH9171429.1;Name=HJH9171429.1;gbkey=CDS;gene=spaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461808.1;locus_tag=O5C65_001285;product=SPI-1 type III secretion system export apparatus protein SpaS;protein_id=HJH9171429.1;transl_table=11 DALFDA020000007.1 tpg gene 116673 117464 . - . ID=gene-O5C65_001286;Name=spaR;gbkey=Gene;gene=spaR;gene_biotype=protein_coding;locus_tag=O5C65_001286 DALFDA020000007.1 Protein Homology CDS 116673 117464 . - 0 ID=cds-HJH9171430.1;Parent=gene-O5C65_001286;Dbxref=NCBI_GP:HJH9171430.1;Name=HJH9171430.1;gbkey=CDS;gene=spaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461809.1;locus_tag=O5C65_001286;product=SPI-1 type III secretion system export apparatus protein SpaR;protein_id=HJH9171430.1;transl_table=11 DALFDA020000007.1 tpg gene 117468 117728 . - . ID=gene-O5C65_001287;Name=spaQ;gbkey=Gene;gene=spaQ;gene_biotype=protein_coding;locus_tag=O5C65_001287 DALFDA020000007.1 Protein Homology CDS 117468 117728 . - 0 ID=cds-HJH9171431.1;Parent=gene-O5C65_001287;Dbxref=NCBI_GP:HJH9171431.1;Name=HJH9171431.1;gbkey=CDS;gene=spaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461810.1;locus_tag=O5C65_001287;product=SPI-1 type III secretion system export apparatus protein SpaQ;protein_id=HJH9171431.1;transl_table=11 DALFDA020000007.1 tpg gene 117754 118428 . - . ID=gene-O5C65_001288;Name=spaP;gbkey=Gene;gene=spaP;gene_biotype=protein_coding;locus_tag=O5C65_001288 DALFDA020000007.1 Protein Homology CDS 117754 118428 . - 0 ID=cds-HJH9171432.1;Parent=gene-O5C65_001288;Dbxref=NCBI_GP:HJH9171432.1;Name=HJH9171432.1;gbkey=CDS;gene=spaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461811.1;locus_tag=O5C65_001288;product=SPI-1 type III secretion system export apparatus protein SpaP;protein_id=HJH9171432.1;transl_table=11 DALFDA020000007.1 tpg gene 118418 119329 . - . ID=gene-O5C65_001289;Name=spaO;gbkey=Gene;gene=spaO;gene_biotype=protein_coding;locus_tag=O5C65_001289 DALFDA020000007.1 Protein Homology CDS 118418 119329 . - 0 ID=cds-HJH9171433.1;Parent=gene-O5C65_001289;Dbxref=NCBI_GP:HJH9171433.1;Name=HJH9171433.1;gbkey=CDS;gene=spaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461812.1;locus_tag=O5C65_001289;product=SPI-1 type III secretion system protein SpaO;protein_id=HJH9171433.1;transl_table=11 DALFDA020000007.1 tpg gene 119329 120339 . - . ID=gene-O5C65_001290;Name=spaN;gbkey=Gene;gene=spaN;gene_biotype=protein_coding;locus_tag=O5C65_001290 DALFDA020000007.1 Protein Homology CDS 119329 120339 . - 0 ID=cds-HJH9171434.1;Parent=gene-O5C65_001290;Dbxref=NCBI_GP:HJH9171434.1;Name=HJH9171434.1;gbkey=CDS;gene=spaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461813.1;locus_tag=O5C65_001290;product=SPI-1 type III secretion system protein SpaN;protein_id=HJH9171434.1;transl_table=11 DALFDA020000007.1 tpg gene 120339 120782 . - . ID=gene-O5C65_001291;Name=spaM;gbkey=Gene;gene=spaM;gene_biotype=protein_coding;locus_tag=O5C65_001291 DALFDA020000007.1 Protein Homology CDS 120339 120782 . - 0 ID=cds-HJH9171435.1;Parent=gene-O5C65_001291;Dbxref=NCBI_GP:HJH9171435.1;Name=HJH9171435.1;gbkey=CDS;gene=spaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461814.1;locus_tag=O5C65_001291;product=SPI-1 type III secretion system protein SpaM;protein_id=HJH9171435.1;transl_table=11 DALFDA020000007.1 tpg gene 120760 122055 . - . ID=gene-O5C65_001292;Name=invC;gbkey=Gene;gene=invC;gene_biotype=protein_coding;locus_tag=O5C65_001292 DALFDA020000007.1 Protein Homology CDS 120760 122055 . - 0 ID=cds-HJH9171436.1;Parent=gene-O5C65_001292;Dbxref=NCBI_GP:HJH9171436.1;Name=HJH9171436.1;gbkey=CDS;gene=invC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461815.1;locus_tag=O5C65_001292;product=SctN family type III secretion system ATPase InvC;protein_id=HJH9171436.1;transl_table=11 DALFDA020000007.1 tpg gene 122052 122459 . - . ID=gene-O5C65_001293;Name=spaK;gbkey=Gene;gene=spaK;gene_biotype=protein_coding;locus_tag=O5C65_001293 DALFDA020000007.1 Protein Homology CDS 122052 122459 . - 0 ID=cds-HJH9171437.1;Parent=gene-O5C65_001293;Dbxref=NCBI_GP:HJH9171437.1;Name=HJH9171437.1;gbkey=CDS;gene=spaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461816.1;locus_tag=O5C65_001293;product=SPI-1 type III secretion system chaperone SpaK;protein_id=HJH9171437.1;transl_table=11 DALFDA020000007.1 tpg gene 122483 124540 . - . ID=gene-O5C65_001294;Name=invA;gbkey=Gene;gene=invA;gene_biotype=protein_coding;locus_tag=O5C65_001294 DALFDA020000007.1 Protein Homology CDS 122483 124540 . - 0 ID=cds-HJH9171438.1;Parent=gene-O5C65_001294;Dbxref=NCBI_GP:HJH9171438.1;Name=HJH9171438.1;gbkey=CDS;gene=invA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461817.1;locus_tag=O5C65_001294;product=type III secretion system export apparatus protein InvA;protein_id=HJH9171438.1;transl_table=11 DALFDA020000007.1 tpg gene 124565 125683 . - . ID=gene-O5C65_001295;Name=invE;gbkey=Gene;gene=invE;gene_biotype=protein_coding;locus_tag=O5C65_001295 DALFDA020000007.1 Protein Homology CDS 124565 125683 . - 0 ID=cds-HJH9171439.1;Parent=gene-O5C65_001295;Dbxref=NCBI_GP:HJH9171439.1;Name=HJH9171439.1;gbkey=CDS;gene=invE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461818.1;locus_tag=O5C65_001295;product=type III secretion system gatekeeper InvE;protein_id=HJH9171439.1;transl_table=11 DALFDA020000007.1 tpg gene 125680 127368 . - . ID=gene-O5C65_001296;Name=invG;gbkey=Gene;gene=invG;gene_biotype=protein_coding;locus_tag=O5C65_001296 DALFDA020000007.1 Protein Homology CDS 125680 127368 . - 0 ID=cds-HJH9171440.1;Parent=gene-O5C65_001296;Dbxref=NCBI_GP:HJH9171440.1;Name=HJH9171440.1;gbkey=CDS;gene=invG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461819.1;locus_tag=O5C65_001296;product=type III secretion system outer membrane ring protein InvG;protein_id=HJH9171440.1;transl_table=11 DALFDA020000007.1 tpg gene 127365 128015 . - . ID=gene-O5C65_001297;Name=invF;gbkey=Gene;gene=invF;gene_biotype=protein_coding;locus_tag=O5C65_001297 DALFDA020000007.1 Protein Homology CDS 127365 128015 . - 0 ID=cds-HJH9171441.1;Parent=gene-O5C65_001297;Dbxref=NCBI_GP:HJH9171441.1;Name=HJH9171441.1;gbkey=CDS;gene=invF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461820.1;locus_tag=O5C65_001297;product=type III secretion system transcriptional activator InvF;protein_id=HJH9171441.1;transl_table=11 DALFDA020000007.1 tpg gene 128472 128915 . + . ID=gene-O5C65_001298;Name=invH;gbkey=Gene;gene=invH;gene_biotype=protein_coding;locus_tag=O5C65_001298 DALFDA020000007.1 Protein Homology CDS 128472 128915 . + 0 ID=cds-HJH9171442.1;Parent=gene-O5C65_001298;Dbxref=NCBI_GP:HJH9171442.1;Name=HJH9171442.1;gbkey=CDS;gene=invH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461821.1;locus_tag=O5C65_001298;product=SPI-1 type III secretion system invasion lipoprotein InvH;protein_id=HJH9171442.1;transl_table=11 DALFDA020000007.1 tpg pseudogene 129319 129497 . + . ID=gene-O5C65_001299;Name=O5C65_001299;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_001299;pseudo=true DALFDA020000007.1 Protein Homology CDS 129319 129497 . + 0 ID=cds-O5C65_001299;Parent=gene-O5C65_001299;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612101.1;locus_tag=O5C65_001299;product=IS3 family transposase;pseudo=true;transl_table=11 DALFDA020000007.1 tpg gene 129766 130056 . + . ID=gene-O5C65_001300;Name=O5C65_001300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001300 DALFDA020000007.1 Protein Homology CDS 129766 130056 . + 0 ID=cds-HJH9171443.1;Parent=gene-O5C65_001300;Dbxref=NCBI_GP:HJH9171443.1;Name=HJH9171443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461825.1;locus_tag=O5C65_001300;product=DUF1778 domain-containing protein;protein_id=HJH9171443.1;transl_table=11 DALFDA020000007.1 tpg gene 130053 130580 . + . ID=gene-O5C65_001301;Name=O5C65_001301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001301 DALFDA020000007.1 Protein Homology CDS 130053 130580 . + 0 ID=cds-HJH9171444.1;Parent=gene-O5C65_001301;Dbxref=NCBI_GP:HJH9171444.1;Name=HJH9171444.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461826.1;locus_tag=O5C65_001301;product=GNAT family N-acetyltransferase;protein_id=HJH9171444.1;transl_table=11 DALFDA020000007.1 tpg pseudogene 130653 130867 . - . ID=gene-O5C65_001302;Name=O5C65_001302;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_001302;pseudo=true DALFDA020000007.1 Protein Homology CDS 130653 130867 . - 0 ID=cds-O5C65_001302;Parent=gene-O5C65_001302;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011791210.1;locus_tag=O5C65_001302;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 DALFDA020000007.1 tpg gene 131205 131861 . + . ID=gene-O5C65_001303;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=O5C65_001303 DALFDA020000007.1 Protein Homology CDS 131205 131861 . + 0 ID=cds-HJH9171445.1;Parent=gene-O5C65_001303;Dbxref=NCBI_GP:HJH9171445.1;Name=HJH9171445.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461828.1;locus_tag=O5C65_001303;product=protein-serine/threonine phosphatase;protein_id=HJH9171445.1;transl_table=11 DALFDA020000007.1 tpg gene 132032 132553 . - . ID=gene-O5C65_001304;Name=O5C65_001304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001304 DALFDA020000007.1 Protein Homology CDS 132032 132553 . - 0 ID=cds-HJH9171446.1;Parent=gene-O5C65_001304;Dbxref=NCBI_GP:HJH9171446.1;Name=HJH9171446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461829.1;locus_tag=O5C65_001304;product=cytoplasmic protein;protein_id=HJH9171446.1;transl_table=11 DALFDA020000007.1 tpg gene 132711 135278 . + . ID=gene-O5C65_001305;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=O5C65_001305 DALFDA020000007.1 Protein Homology CDS 132711 135278 . + 0 ID=cds-HJH9171447.1;Parent=gene-O5C65_001305;Dbxref=NCBI_GP:HJH9171447.1;Name=HJH9171447.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461830.1;locus_tag=O5C65_001305;product=DNA mismatch repair protein MutS;protein_id=HJH9171447.1;transl_table=11 DALFDA020000007.1 tpg gene 135334 135714 . - . ID=gene-O5C65_001306;Name=O5C65_001306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001306 DALFDA020000007.1 Protein Homology CDS 135334 135714 . - 0 ID=cds-HJH9171448.1;Parent=gene-O5C65_001306;Dbxref=NCBI_GP:HJH9171448.1;Name=HJH9171448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461831.1;locus_tag=O5C65_001306;product=DUF4440 domain-containing protein;protein_id=HJH9171448.1;transl_table=11 DALFDA020000007.1 tpg gene 135711 136919 . - . ID=gene-O5C65_001307;Name=O5C65_001307;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001307 DALFDA020000007.1 Protein Homology CDS 135711 136919 . - 0 ID=cds-HJH9171449.1;Parent=gene-O5C65_001307;Dbxref=NCBI_GP:HJH9171449.1;Name=HJH9171449.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461832.1;locus_tag=O5C65_001307;product=MFS transporter;protein_id=HJH9171449.1;transl_table=11 DALFDA020000007.1 tpg gene 137007 137939 . + . ID=gene-O5C65_001308;Name=O5C65_001308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001308 DALFDA020000007.1 Protein Homology CDS 137007 137939 . + 0 ID=cds-HJH9171450.1;Parent=gene-O5C65_001308;Dbxref=NCBI_GP:HJH9171450.1;Name=HJH9171450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216314.1;locus_tag=O5C65_001308;product=LysR substrate-binding domain-containing protein;protein_id=HJH9171450.1;transl_table=11 DALFDA020000007.1 tpg gene 137981 139477 . - . ID=gene-O5C65_001309;Name=O5C65_001309;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001309 DALFDA020000007.1 Protein Homology CDS 137981 139477 . - 0 ID=cds-HJH9171451.1;Parent=gene-O5C65_001309;Dbxref=NCBI_GP:HJH9171451.1;Name=HJH9171451.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461834.1;locus_tag=O5C65_001309;product=GntP family permease;protein_id=HJH9171451.1;transl_table=11 DALFDA020000007.1 tpg gene 139474 140424 . - . ID=gene-O5C65_001310;Name=denD;gbkey=Gene;gene=denD;gene_biotype=protein_coding;locus_tag=O5C65_001310 DALFDA020000007.1 Protein Homology CDS 139474 140424 . - 0 ID=cds-HJH9171452.1;Parent=gene-O5C65_001310;Dbxref=NCBI_GP:HJH9171452.1;Name=HJH9171452.1;Ontology_term=GO:0005975,GO:0016491;gbkey=CDS;gene=denD;go_function=oxidoreductase activity|0016491||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461835.1;locus_tag=O5C65_001310;product=D-erythronate dehydrogenase;protein_id=HJH9171452.1;transl_table=11 DALFDA020000007.1 tpg gene 140464 141240 . - . ID=gene-O5C65_001311;Name=O5C65_001311;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001311 DALFDA020000007.1 Protein Homology CDS 140464 141240 . - 0 ID=cds-HJH9171453.1;Parent=gene-O5C65_001311;Dbxref=NCBI_GP:HJH9171453.1;Name=HJH9171453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461836.1;locus_tag=O5C65_001311;product=HPr family phosphocarrier protein;protein_id=HJH9171453.1;transl_table=11 DALFDA020000007.1 tpg gene 141245 141883 . - . ID=gene-O5C65_001312;Name=O5C65_001312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001312 DALFDA020000007.1 Protein Homology CDS 141245 141883 . - 0 ID=cds-HJH9171454.1;Parent=gene-O5C65_001312;Dbxref=NCBI_GP:HJH9171454.1;Name=HJH9171454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461837.1;locus_tag=O5C65_001312;product=aldolase;protein_id=HJH9171454.1;transl_table=11 DALFDA020000007.1 tpg gene 141880 143142 . - . ID=gene-O5C65_001313;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=O5C65_001313 DALFDA020000007.1 Protein Homology CDS 141880 143142 . - 0 ID=cds-HJH9171455.1;Parent=gene-O5C65_001313;Dbxref=NCBI_GP:HJH9171455.1;Name=HJH9171455.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461838.1;locus_tag=O5C65_001313;product=3-oxo-tetronate kinase;protein_id=HJH9171455.1;transl_table=11 DALFDA020000007.1 tpg gene 143136 144059 . - . ID=gene-O5C65_001314;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=O5C65_001314 DALFDA020000007.1 Protein Homology CDS 143136 144059 . - 0 ID=cds-HJH9171456.1;Parent=gene-O5C65_001314;Dbxref=NCBI_GP:HJH9171456.1;Name=HJH9171456.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461839.1;locus_tag=O5C65_001314;product=L-threonate dehydrogenase;protein_id=HJH9171456.1;transl_table=11 DALFDA020000007.1 tpg gene 144256 145020 . + . ID=gene-O5C65_001315;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=O5C65_001315 DALFDA020000007.1 Protein Homology CDS 144256 145020 . + 0 ID=cds-HJH9171457.1;Parent=gene-O5C65_001315;Dbxref=NCBI_GP:HJH9171457.1;Name=HJH9171457.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461840.1;locus_tag=O5C65_001315;product=DNA-binding transcriptional repressor YgbI;protein_id=HJH9171457.1;transl_table=11 DALFDA020000007.1 tpg gene 145039 145443 . - . ID=gene-O5C65_001316;Name=O5C65_001316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001316 DALFDA020000007.1 Protein Homology CDS 145039 145443 . - 0 ID=cds-HJH9171458.1;Parent=gene-O5C65_001316;Dbxref=NCBI_GP:HJH9171458.1;Name=HJH9171458.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461841.1;locus_tag=O5C65_001316;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=HJH9171458.1;transl_table=11 DALFDA020000007.1 tpg gene 145614 146207 . + . ID=gene-O5C65_001317;Name=O5C65_001317;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001317 DALFDA020000007.1 Protein Homology CDS 145614 146207 . + 0 ID=cds-HJH9171459.1;Parent=gene-O5C65_001317;Dbxref=NCBI_GP:HJH9171459.1;Name=HJH9171459.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461842.1;locus_tag=O5C65_001317;product=non-oxidative hydroxyarylic acid decarboxylases subunit B;protein_id=HJH9171459.1;transl_table=11 DALFDA020000007.1 tpg gene 146207 147634 . + . ID=gene-O5C65_001318;Name=O5C65_001318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001318 DALFDA020000007.1 Protein Homology CDS 146207 147634 . + 0 ID=cds-HJH9171460.1;Parent=gene-O5C65_001318;Dbxref=NCBI_GP:HJH9171460.1;Name=HJH9171460.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461843.1;locus_tag=O5C65_001318;product=non-oxidative hydroxyarylic acid decarboxylases subunit C;protein_id=HJH9171460.1;transl_table=11 DALFDA020000007.1 tpg gene 147645 147881 . + . ID=gene-O5C65_001319;Name=O5C65_001319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001319 DALFDA020000007.1 Protein Homology CDS 147645 147881 . + 0 ID=cds-HJH9171461.1;Parent=gene-O5C65_001319;Dbxref=NCBI_GP:HJH9171461.1;Name=HJH9171461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461844.1;locus_tag=O5C65_001319;product=non-oxidative hydroxyarylic acid decarboxylases subunit D;protein_id=HJH9171461.1;transl_table=11 DALFDA020000007.1 tpg gene 147926 148918 . - . ID=gene-O5C65_001320;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=O5C65_001320 DALFDA020000007.1 Protein Homology CDS 147926 148918 . - 0 ID=cds-HJH9171462.1;Parent=gene-O5C65_001320;Dbxref=NCBI_GP:HJH9171462.1;Name=HJH9171462.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=O5C65_001320;product=RNA polymerase sigma factor RpoS;protein_id=HJH9171462.1;transl_table=11 DALFDA020000007.1 tpg gene 148981 150063 . - . ID=gene-O5C65_001321;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=O5C65_001321 DALFDA020000007.1 Protein Homology CDS 148981 150063 . - 0 ID=cds-HJH9171463.1;Parent=gene-O5C65_001321;Dbxref=NCBI_GP:HJH9171463.1;Name=HJH9171463.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461846.1;locus_tag=O5C65_001321;product=murein hydrolase activator NlpD;protein_id=HJH9171463.1;transl_table=11 DALFDA020000007.1 tpg gene 149993 150151 . + . ID=gene-O5C65_001322;Name=O5C65_001322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001322 DALFDA020000007.1 Protein Homology CDS 149993 150151 . + 0 ID=cds-HJH9171464.1;Parent=gene-O5C65_001322;Dbxref=NCBI_GP:HJH9171464.1;Name=HJH9171464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541719.1;locus_tag=O5C65_001322;product=peptidase;protein_id=HJH9171464.1;transl_table=11 DALFDA020000007.1 tpg gene 150290 150916 . - . ID=gene-O5C65_001323;Name=O5C65_001323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001323 DALFDA020000007.1 Protein Homology CDS 150290 150916 . - 0 ID=cds-HJH9171465.1;Parent=gene-O5C65_001323;Dbxref=NCBI_GP:HJH9171465.1;Name=HJH9171465.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=O5C65_001323;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=HJH9171465.1;transl_table=11 DALFDA020000007.1 tpg gene 150910 151671 . - . ID=gene-O5C65_001324;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=O5C65_001324 DALFDA020000007.1 Protein Homology CDS 150910 151671 . - 0 ID=cds-HJH9171466.1;Parent=gene-O5C65_001324;Dbxref=NCBI_GP:HJH9171466.1;Name=HJH9171466.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461848.1;locus_tag=O5C65_001324;product=5'/3'-nucleotidase SurE;protein_id=HJH9171466.1;transl_table=11 DALFDA020000007.1 tpg gene 151652 152701 . - . ID=gene-O5C65_001325;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=O5C65_001325 DALFDA020000007.1 Protein Homology CDS 151652 152701 . - 0 ID=cds-HJH9171467.1;Parent=gene-O5C65_001325;Dbxref=NCBI_GP:HJH9171467.1;Name=HJH9171467.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461849.1;locus_tag=O5C65_001325;product=tRNA pseudouridine(13) synthase TruD;protein_id=HJH9171467.1;transl_table=11 DALFDA020000007.1 tpg gene 152698 153177 . - . ID=gene-O5C65_001326;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=O5C65_001326 DALFDA020000007.1 Protein Homology CDS 152698 153177 . - 0 ID=cds-HJH9171468.1;Parent=gene-O5C65_001326;Dbxref=NCBI_GP:HJH9171468.1;Name=HJH9171468.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461850.1;locus_tag=O5C65_001326;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=HJH9171468.1;transl_table=11 DALFDA020000007.1 tpg gene 153177 153887 . - . ID=gene-O5C65_001327;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=O5C65_001327 DALFDA020000007.1 Protein Homology CDS 153177 153887 . - 0 ID=cds-HJH9171469.1;Parent=gene-O5C65_001327;Dbxref=NCBI_GP:HJH9171469.1;Name=HJH9171469.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461851.1;locus_tag=O5C65_001327;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=HJH9171469.1;transl_table=11 DALFDA020000007.1 tpg gene 153906 154217 . - . ID=gene-O5C65_001328;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=O5C65_001328 DALFDA020000007.1 Protein Homology CDS 153906 154217 . - 0 ID=cds-HJH9171470.1;Parent=gene-O5C65_001328;Dbxref=NCBI_GP:HJH9171470.1;Name=HJH9171470.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461852.1;locus_tag=O5C65_001328;product=cell division protein FtsB;protein_id=HJH9171470.1;transl_table=11 DALFDA020000007.1 tpg gene 154408 154731 . - . ID=gene-O5C65_001329;Name=O5C65_001329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001329 DALFDA020000007.1 Protein Homology CDS 154408 154731 . - 0 ID=cds-HJH9171471.1;Parent=gene-O5C65_001329;Dbxref=NCBI_GP:HJH9171471.1;Name=HJH9171471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246104.1;locus_tag=O5C65_001329;product=DUF3561 family protein;protein_id=HJH9171471.1;transl_table=11 DALFDA020000007.1 tpg gene 154782 155387 . - . ID=gene-O5C65_001330;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=O5C65_001330 DALFDA020000007.1 Protein Homology CDS 154782 155387 . - 0 ID=cds-HJH9171472.1;Parent=gene-O5C65_001330;Dbxref=NCBI_GP:HJH9171472.1;Name=HJH9171472.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461854.1;locus_tag=O5C65_001330;product=adenylyl-sulfate kinase;protein_id=HJH9171472.1;transl_table=11 DALFDA020000007.1 tpg gene 155374 156813 . - . ID=gene-O5C65_001331;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=O5C65_001331 DALFDA020000007.1 Protein Homology CDS 155374 156813 . - 0 ID=cds-HJH9171473.1;Parent=gene-O5C65_001331;Dbxref=NCBI_GP:HJH9171473.1;Name=HJH9171473.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461855.1;locus_tag=O5C65_001331;product=sulfate adenylyltransferase subunit CysN;protein_id=HJH9171473.1;transl_table=11 DALFDA020000007.1 tpg gene 156823 157731 . - . ID=gene-O5C65_001332;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=O5C65_001332 DALFDA020000007.1 Protein Homology CDS 156823 157731 . - 0 ID=cds-HJH9171474.1;Parent=gene-O5C65_001332;Dbxref=NCBI_GP:HJH9171474.1;Name=HJH9171474.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=O5C65_001332;product=sulfate adenylyltransferase subunit CysD;protein_id=HJH9171474.1;transl_table=11 DALFDA020000007.1 tpg gene 157982 159028 . + . ID=gene-O5C65_001333;Name=O5C65_001333;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001333 DALFDA020000007.1 Protein Homology CDS 157982 159028 . + 0 ID=cds-HJH9171475.1;Parent=gene-O5C65_001333;Dbxref=NCBI_GP:HJH9171475.1;Name=HJH9171475.1;Ontology_term=GO:0008235;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461857.1;locus_tag=O5C65_001333;product=aminopeptidase;protein_id=HJH9171475.1;transl_table=11 DALFDA020000007.1 tpg direct_repeat 159043 159376 . + . ID=id-DALFDA020000007.1:159043..159376;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=159043..159071;rpt_unit_seq=cggtttatccccgctggcgcggggaacac DALFDA020000007.1 tpg gene 159473 159766 . - . ID=gene-O5C65_001334;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=O5C65_001334 DALFDA020000007.1 Protein Homology CDS 159473 159766 . - 0 ID=cds-HJH9171476.1;Parent=gene-O5C65_001334;Dbxref=NCBI_GP:HJH9171476.1;Name=HJH9171476.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2e;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311635.1;locus_tag=O5C65_001334;product=type I-E CRISPR-associated endoribonuclease Cas2e;protein_id=HJH9171476.1;transl_table=11 DALFDA020000007.1 tpg gene 159766 160686 . - . ID=gene-O5C65_001335;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=O5C65_001335 DALFDA020000007.1 Protein Homology CDS 159766 160686 . - 0 ID=cds-HJH9171477.1;Parent=gene-O5C65_001335;Dbxref=NCBI_GP:HJH9171477.1;Name=HJH9171477.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1e;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461859.1;locus_tag=O5C65_001335;product=type I-E CRISPR-associated endonuclease Cas1e;protein_id=HJH9171477.1;transl_table=11 DALFDA020000007.1 tpg gene 160683 161333 . - . ID=gene-O5C65_001336;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=O5C65_001336 DALFDA020000007.1 Protein Homology CDS 160683 161333 . - 0 ID=cds-HJH9171478.1;Parent=gene-O5C65_001336;Dbxref=NCBI_GP:HJH9171478.1;Name=HJH9171478.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas6e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461860.1;locus_tag=O5C65_001336;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=HJH9171478.1;transl_table=11 DALFDA020000007.1 tpg gene 161315 162061 . - . ID=gene-O5C65_001337;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=O5C65_001337 DALFDA020000007.1 Protein Homology CDS 161315 162061 . - 0 ID=cds-HJH9171479.1;Parent=gene-O5C65_001337;Dbxref=NCBI_GP:HJH9171479.1;Name=HJH9171479.1;Ontology_term=GO:0043571,GO:0051607,GO:0003723;gbkey=CDS;gene=cas5e;go_function=RNA binding|0003723||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461861.1;locus_tag=O5C65_001337;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=HJH9171479.1;transl_table=11 DALFDA020000007.1 tpg gene 162072 163130 . - . ID=gene-O5C65_001338;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=O5C65_001338 DALFDA020000007.1 Protein Homology CDS 162072 163130 . - 0 ID=cds-HJH9171480.1;Parent=gene-O5C65_001338;Dbxref=NCBI_GP:HJH9171480.1;Name=HJH9171480.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas7e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461862.1;locus_tag=O5C65_001338;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=HJH9171480.1;transl_table=11 DALFDA020000007.1 tpg gene 163144 163692 . - . ID=gene-O5C65_001339;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;gene_synonym=cse2;locus_tag=O5C65_001339 DALFDA020000007.1 Protein Homology CDS 163144 163692 . - 0 ID=cds-HJH9171481.1;Parent=gene-O5C65_001339;Dbxref=NCBI_GP:HJH9171481.1;Name=HJH9171481.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casB;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540805.1;locus_tag=O5C65_001339;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=HJH9171481.1;transl_table=11 DALFDA020000007.1 tpg gene 163689 165248 . - . ID=gene-O5C65_001340;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;gene_synonym=cse1;locus_tag=O5C65_001340 DALFDA020000007.1 Protein Homology CDS 163689 165248 . - 0 ID=cds-HJH9171482.1;Parent=gene-O5C65_001340;Dbxref=NCBI_GP:HJH9171482.1;Name=HJH9171482.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461864.1;locus_tag=O5C65_001340;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=HJH9171482.1;transl_table=11 DALFDA020000007.1 tpg gene 165260 167923 . - . ID=gene-O5C65_001341;Name=cas3;gbkey=Gene;gene=cas3;gene_biotype=protein_coding;locus_tag=O5C65_001341 DALFDA020000007.1 Protein Homology CDS 165260 167923 . - 0 ID=cds-HJH9171483.1;Parent=gene-O5C65_001341;Dbxref=NCBI_GP:HJH9171483.1;Name=HJH9171483.1;Ontology_term=GO:0043571,GO:0004386;gbkey=CDS;gene=cas3;go_function=helicase activity|0004386||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461865.1;locus_tag=O5C65_001341;product=CRISPR-associated helicase Cas3';protein_id=HJH9171483.1;transl_table=11 DALFDA020000007.1 tpg gene 168367 169320 . + . ID=gene-O5C65_001342;Name=sopD;gbkey=Gene;gene=sopD;gene_biotype=protein_coding;locus_tag=O5C65_001342 DALFDA020000007.1 Protein Homology CDS 168367 169320 . + 0 ID=cds-HJH9171484.1;Parent=gene-O5C65_001342;Dbxref=NCBI_GP:HJH9171484.1;Name=HJH9171484.1;gbkey=CDS;gene=sopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461866.1;locus_tag=O5C65_001342;product=SPI-1 type III secretion system effector SopD;protein_id=HJH9171484.1;transl_table=11 DALFDA020000007.1 tpg gene 169408 170142 . - . ID=gene-O5C65_001343;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=O5C65_001343 DALFDA020000007.1 Protein Homology CDS 169408 170142 . - 0 ID=cds-HJH9171485.1;Parent=gene-O5C65_001343;Dbxref=NCBI_GP:HJH9171485.1;Name=HJH9171485.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461867.1;locus_tag=O5C65_001343;product=phosphoadenosine phosphosulfate reductase;protein_id=HJH9171485.1;transl_table=11 DALFDA020000007.1 tpg gene 170218 171930 . - . ID=gene-O5C65_001344;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=O5C65_001344 DALFDA020000007.1 Protein Homology CDS 170218 171930 . - 0 ID=cds-HJH9171486.1;Parent=gene-O5C65_001344;Dbxref=NCBI_GP:HJH9171486.1;Name=HJH9171486.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=O5C65_001344;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=HJH9171486.1;transl_table=11 DALFDA020000007.1 tpg gene 171930 173729 . - . ID=gene-O5C65_001345;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=O5C65_001345 DALFDA020000007.1 Protein Homology CDS 171930 173729 . - 0 ID=cds-HJH9171487.1;Parent=gene-O5C65_001345;Dbxref=NCBI_GP:HJH9171487.1;Name=HJH9171487.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461869.1;locus_tag=O5C65_001345;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=HJH9171487.1;transl_table=11 DALFDA020000007.1 tpg gene 174152 174514 . + . ID=gene-O5C65_001346;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=O5C65_001346 DALFDA020000007.1 Protein Homology CDS 174152 174514 . + 0 ID=cds-HJH9171488.1;Parent=gene-O5C65_001346;Dbxref=NCBI_GP:HJH9171488.1;Name=HJH9171488.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461870.1;locus_tag=O5C65_001346;product=6-carboxytetrahydropterin synthase QueD;protein_id=HJH9171488.1;transl_table=11 DALFDA020000007.1 tpg gene 174602 175399 . - . ID=gene-O5C65_001347;Name=O5C65_001347;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001347 DALFDA020000007.1 Protein Homology CDS 174602 175399 . - 0 ID=cds-HJH9171489.1;Parent=gene-O5C65_001347;Dbxref=NCBI_GP:HJH9171489.1;Name=HJH9171489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461871.1;locus_tag=O5C65_001347;product=MBL fold metallo-hydrolase;protein_id=HJH9171489.1;transl_table=11 DALFDA020000007.1 tpg gene 175883 176554 . - . ID=gene-O5C65_001348;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=O5C65_001348 DALFDA020000007.1 Protein Homology CDS 175883 176554 . - 0 ID=cds-HJH9171490.1;Parent=gene-O5C65_001348;Dbxref=NCBI_GP:HJH9171490.1;Name=HJH9171490.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=O5C65_001348;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=HJH9171490.1;transl_table=11 DALFDA020000007.1 tpg gene 176690 177988 . - . ID=gene-O5C65_001349;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=O5C65_001349 DALFDA020000007.1 Protein Homology CDS 176690 177988 . - 0 ID=cds-HJH9171491.1;Parent=gene-O5C65_001349;Dbxref=NCBI_GP:HJH9171491.1;Name=HJH9171491.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=O5C65_001349;product=phosphopyruvate hydratase;protein_id=HJH9171491.1;transl_table=11 DALFDA020000007.1 tpg gene 178071 179708 . - . ID=gene-O5C65_001350;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=O5C65_001350 DALFDA020000007.1 Protein Homology CDS 178071 179708 . - 0 ID=cds-HJH9171492.1;Parent=gene-O5C65_001350;Dbxref=NCBI_GP:HJH9171492.1;Name=HJH9171492.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=O5C65_001350;product=glutamine hydrolyzing CTP synthase;protein_id=HJH9171492.1;transl_table=11 DALFDA020000007.1 tpg gene 179936 180736 . - . ID=gene-O5C65_001351;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=O5C65_001351 DALFDA020000007.1 Protein Homology CDS 179936 180736 . - 0 ID=cds-HJH9171493.1;Parent=gene-O5C65_001351;Dbxref=NCBI_GP:HJH9171493.1;Name=HJH9171493.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461875.1;locus_tag=O5C65_001351;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=HJH9171493.1;transl_table=11 ##sequence-region DALFDA020000008.1 1 177109 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000008.1 tpg region 1 177109 . + . ID=DALFDA020000008.1:1..177109;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000008.1 tpg gene 56 1489 . - . ID=gene-O5C65_001352;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=O5C65_001352 DALFDA020000008.1 Protein Homology CDS 56 1489 . - 0 ID=cds-HJH9171494.1;Parent=gene-O5C65_001352;Dbxref=NCBI_GP:HJH9171494.1;Name=HJH9171494.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462211.1;locus_tag=O5C65_001352;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=HJH9171494.1;transl_table=11 DALFDA020000008.1 tpg gene 1737 2213 . + . ID=gene-O5C65_001353;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=O5C65_001353 DALFDA020000008.1 Protein Homology CDS 1737 2213 . + 0 ID=cds-HJH9171495.1;Parent=gene-O5C65_001353;Dbxref=NCBI_GP:HJH9171495.1;Name=HJH9171495.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=O5C65_001353;product=transcription elongation factor GreA;protein_id=HJH9171495.1;transl_table=11 DALFDA020000008.1 tpg gene 2369 2662 . - . ID=gene-O5C65_001354;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=O5C65_001354 DALFDA020000008.1 Protein Homology CDS 2369 2662 . - 0 ID=cds-HJH9171496.1;Parent=gene-O5C65_001354;Dbxref=NCBI_GP:HJH9171496.1;Name=HJH9171496.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=O5C65_001354;product=ribosome assembly RNA-binding protein YhbY;protein_id=HJH9171496.1;transl_table=11 DALFDA020000008.1 tpg gene 2789 3415 . + . ID=gene-O5C65_001355;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=O5C65_001355 DALFDA020000008.1 Protein Homology CDS 2789 3415 . + 0 ID=cds-HJH9171497.1;Parent=gene-O5C65_001355;Dbxref=NCBI_GP:HJH9171497.1;Name=HJH9171497.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462208.1;locus_tag=O5C65_001355;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=HJH9171497.1;transl_table=11 DALFDA020000008.1 tpg gene 3519 5453 . + . ID=gene-O5C65_001356;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=O5C65_001356 DALFDA020000008.1 Protein Homology CDS 3519 5453 . + 0 ID=cds-HJH9171498.1;Parent=gene-O5C65_001356;Dbxref=NCBI_GP:HJH9171498.1;Name=HJH9171498.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=O5C65_001356;product=ATP-dependent zinc metalloprotease FtsH;protein_id=HJH9171498.1;transl_table=11 DALFDA020000008.1 tpg gene 5557 6405 . + . ID=gene-O5C65_001357;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=O5C65_001357 DALFDA020000008.1 Protein Homology CDS 5557 6405 . + 0 ID=cds-HJH9171499.1;Parent=gene-O5C65_001357;Dbxref=NCBI_GP:HJH9171499.1;Name=HJH9171499.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462206.1;locus_tag=O5C65_001357;product=dihydropteroate synthase;protein_id=HJH9171499.1;transl_table=11 DALFDA020000008.1 tpg gene 6398 7735 . + . ID=gene-O5C65_001358;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=O5C65_001358 DALFDA020000008.1 Protein Homology CDS 6398 7735 . + 0 ID=cds-HJH9171500.1;Parent=gene-O5C65_001358;Dbxref=NCBI_GP:HJH9171500.1;Name=HJH9171500.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462205.1;locus_tag=O5C65_001358;product=phosphoglucosamine mutase;protein_id=HJH9171500.1;transl_table=11 DALFDA020000008.1 tpg gene 7958 8290 . + . ID=gene-O5C65_001359;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=O5C65_001359 DALFDA020000008.1 Protein Homology CDS 7958 8290 . + 0 ID=cds-HJH9171501.1;Parent=gene-O5C65_001359;Dbxref=NCBI_GP:HJH9171501.1;Name=HJH9171501.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462204.1;locus_tag=O5C65_001359;product=preprotein translocase subunit SecG;protein_id=HJH9171501.1;transl_table=11 DALFDA020000008.1 tpg gene 8304 8390 . + . ID=gene-O5C65_001360;Name=O5C65_001360;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_001360 DALFDA020000008.1 tRNAscan-SE tRNA 8304 8390 . + . ID=rna-O5C65_001360;Parent=gene-O5C65_001360;anticodon=(pos:8338..8340);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_001360;product=tRNA-Leu DALFDA020000008.1 tRNAscan-SE exon 8304 8390 . + . ID=exon-O5C65_001360-1;Parent=rna-O5C65_001360;anticodon=(pos:8338..8340);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_001360;product=tRNA-Leu DALFDA020000008.1 tpg gene 8588 9931 . - . ID=gene-O5C65_001361;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=O5C65_001361 DALFDA020000008.1 Protein Homology CDS 8588 9931 . - 0 ID=cds-HJH9171502.1;Parent=gene-O5C65_001361;Dbxref=NCBI_GP:HJH9171502.1;Name=HJH9171502.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=O5C65_001361;product=argininosuccinate synthase;protein_id=HJH9171502.1;transl_table=11 DALFDA020000008.1 tpg gene 10275 10351 . + . ID=gene-O5C65_001362;Name=O5C65_001362;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_001362 DALFDA020000008.1 tRNAscan-SE tRNA 10275 10351 . + . ID=rna-O5C65_001362;Parent=gene-O5C65_001362;anticodon=(pos:10309..10311);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_001362;product=tRNA-Met DALFDA020000008.1 tRNAscan-SE exon 10275 10351 . + . ID=exon-O5C65_001362-1;Parent=rna-O5C65_001362;anticodon=(pos:10309..10311);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_001362;product=tRNA-Met DALFDA020000008.1 tpg gene 10559 11011 . + . ID=gene-O5C65_001363;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=O5C65_001363 DALFDA020000008.1 Protein Homology CDS 10559 11011 . + 0 ID=cds-HJH9171503.1;Parent=gene-O5C65_001363;Dbxref=NCBI_GP:HJH9171503.1;Name=HJH9171503.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=O5C65_001363;product=ribosome maturation factor RimP;protein_id=HJH9171503.1;transl_table=11 DALFDA020000008.1 tpg gene 11039 12541 . + . ID=gene-O5C65_001364;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=O5C65_001364 DALFDA020000008.1 Protein Homology CDS 11039 12541 . + 0 ID=cds-HJH9171504.1;Parent=gene-O5C65_001364;Dbxref=NCBI_GP:HJH9171504.1;Name=HJH9171504.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=O5C65_001364;product=transcription termination factor NusA;protein_id=HJH9171504.1;transl_table=11 DALFDA020000008.1 tpg gene 12566 15244 . + . ID=gene-O5C65_001365;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=O5C65_001365 DALFDA020000008.1 Protein Homology CDS 12566 15244 . + 0 ID=cds-HJH9171505.1;Parent=gene-O5C65_001365;Dbxref=NCBI_GP:HJH9171505.1;Name=HJH9171505.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462199.1;locus_tag=O5C65_001365;product=translation initiation factor IF-2;protein_id=HJH9171505.1;transl_table=11 DALFDA020000008.1 tpg gene 15465 15866 . + . ID=gene-O5C65_001366;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=O5C65_001366 DALFDA020000008.1 Protein Homology CDS 15465 15866 . + 0 ID=cds-HJH9171506.1;Parent=gene-O5C65_001366;Dbxref=NCBI_GP:HJH9171506.1;Name=HJH9171506.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=O5C65_001366;product=30S ribosome-binding factor RbfA;protein_id=HJH9171506.1;transl_table=11 DALFDA020000008.1 tpg gene 15866 16810 . + . ID=gene-O5C65_001367;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=O5C65_001367 DALFDA020000008.1 Protein Homology CDS 15866 16810 . + 0 ID=cds-HJH9171507.1;Parent=gene-O5C65_001367;Dbxref=NCBI_GP:HJH9171507.1;Name=HJH9171507.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462197.1;locus_tag=O5C65_001367;product=tRNA pseudouridine(55) synthase TruB;protein_id=HJH9171507.1;transl_table=11 DALFDA020000008.1 tpg gene 16961 17230 . + . ID=gene-O5C65_001368;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=O5C65_001368 DALFDA020000008.1 Protein Homology CDS 16961 17230 . + 0 ID=cds-HJH9171508.1;Parent=gene-O5C65_001368;Dbxref=NCBI_GP:HJH9171508.1;Name=HJH9171508.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=O5C65_001368;product=30S ribosomal protein S15;protein_id=HJH9171508.1;transl_table=11 DALFDA020000008.1 tpg gene 17472 19607 . + . ID=gene-O5C65_001369;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=O5C65_001369 DALFDA020000008.1 Protein Homology CDS 17472 19607 . + 0 ID=cds-HJH9171509.1;Parent=gene-O5C65_001369;Dbxref=NCBI_GP:HJH9171509.1;Name=HJH9171509.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462195.1;locus_tag=O5C65_001369;product=polyribonucleotide nucleotidyltransferase;protein_id=HJH9171509.1;transl_table=11 DALFDA020000008.1 tpg gene 19717 20601 . + . ID=gene-O5C65_001370;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=O5C65_001370 DALFDA020000008.1 Protein Homology CDS 19717 20601 . + 0 ID=cds-HJH9171510.1;Parent=gene-O5C65_001370;Dbxref=NCBI_GP:HJH9171510.1;Name=HJH9171510.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=O5C65_001370;product=lipoprotein NlpI;protein_id=HJH9171510.1;transl_table=11 DALFDA020000008.1 tpg gene 20707 20787 . + . ID=gene-O5C65_001371;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=O5C65_001371 DALFDA020000008.1 Protein Homology CDS 20707 20787 . + 0 ID=cds-HJH9171511.1;Parent=gene-O5C65_001371;Dbxref=NCBI_GP:HJH9171511.1;Name=HJH9171511.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=O5C65_001371;product=protein YrbN;protein_id=HJH9171511.1;transl_table=11 DALFDA020000008.1 tpg gene 20780 22669 . + . ID=gene-O5C65_001372;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=O5C65_001372 DALFDA020000008.1 Protein Homology CDS 20780 22669 . + 0 ID=cds-HJH9171512.1;Parent=gene-O5C65_001372;Dbxref=NCBI_GP:HJH9171512.1;Name=HJH9171512.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312070.2;locus_tag=O5C65_001372;product=ATP-dependent RNA helicase DeaD;protein_id=HJH9171512.1;transl_table=11 DALFDA020000008.1 tpg gene 22823 24067 . + . ID=gene-O5C65_001373;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=O5C65_001373 DALFDA020000008.1 Protein Homology CDS 22823 24067 . + 0 ID=cds-HJH9171513.1;Parent=gene-O5C65_001373;Dbxref=NCBI_GP:HJH9171513.1;Name=HJH9171513.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462192.1;locus_tag=O5C65_001373;product=tryptophan permease;protein_id=HJH9171513.1;transl_table=11 DALFDA020000008.1 tpg gene 24158 25165 . - . ID=gene-O5C65_001374;Name=O5C65_001374;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001374 DALFDA020000008.1 Protein Homology CDS 24158 25165 . - 0 ID=cds-HJH9171514.1;Parent=gene-O5C65_001374;Dbxref=NCBI_GP:HJH9171514.1;Name=HJH9171514.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462189.1;locus_tag=O5C65_001374;product=luciferase-like monooxygenase;protein_id=HJH9171514.1;transl_table=11 DALFDA020000008.1 tpg gene 25343 26221 . - . ID=gene-O5C65_001375;Name=O5C65_001375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001375 DALFDA020000008.1 Protein Homology CDS 25343 26221 . - 0 ID=cds-HJH9171515.1;Parent=gene-O5C65_001375;Dbxref=NCBI_GP:HJH9171515.1;Name=HJH9171515.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312067.2;locus_tag=O5C65_001375;product=U32 family peptidase;protein_id=HJH9171515.1;transl_table=11 DALFDA020000008.1 tpg gene 26230 27225 . - . ID=gene-O5C65_001376;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=O5C65_001376 DALFDA020000008.1 Protein Homology CDS 26230 27225 . - 0 ID=cds-HJH9171516.1;Parent=gene-O5C65_001376;Dbxref=NCBI_GP:HJH9171516.1;Name=HJH9171516.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=O5C65_001376;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=HJH9171516.1;transl_table=11 DALFDA020000008.1 tpg gene 27442 27966 . + . ID=gene-O5C65_001377;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=O5C65_001377 DALFDA020000008.1 Protein Homology CDS 27442 27966 . + 0 ID=cds-HJH9171517.1;Parent=gene-O5C65_001377;Dbxref=NCBI_GP:HJH9171517.1;Name=HJH9171517.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462186.1;locus_tag=O5C65_001377;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=HJH9171517.1;transl_table=11 DALFDA020000008.1 tpg gene 27960 28463 . + . ID=gene-O5C65_001378;Name=O5C65_001378;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001378 DALFDA020000008.1 Protein Homology CDS 27960 28463 . + 0 ID=cds-HJH9171518.1;Parent=gene-O5C65_001378;Dbxref=NCBI_GP:HJH9171518.1;Name=HJH9171518.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462185.1;locus_tag=O5C65_001378;product=GNAT family N-acetyltransferase;protein_id=HJH9171518.1;transl_table=11 DALFDA020000008.1 tpg gene 28450 28767 . - . ID=gene-O5C65_001379;Name=O5C65_001379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001379 DALFDA020000008.1 Protein Homology CDS 28450 28767 . - 0 ID=cds-HJH9171519.1;Parent=gene-O5C65_001379;Dbxref=NCBI_GP:HJH9171519.1;Name=HJH9171519.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462184.3;locus_tag=O5C65_001379;product=GIY-YIG nuclease family protein;protein_id=HJH9171519.1;transl_table=11 DALFDA020000008.1 tpg gene 28805 29248 . + . ID=gene-O5C65_001380;Name=O5C65_001380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001380 DALFDA020000008.1 Protein Homology CDS 28805 29248 . + 0 ID=cds-HJH9171520.1;Parent=gene-O5C65_001380;Dbxref=NCBI_GP:HJH9171520.1;Name=HJH9171520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462183.1;locus_tag=O5C65_001380;product=YhbP family protein;protein_id=HJH9171520.1;transl_table=11 DALFDA020000008.1 tpg gene 29228 29746 . - . ID=gene-O5C65_001381;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=O5C65_001381 DALFDA020000008.1 Protein Homology CDS 29228 29746 . - 0 ID=cds-HJH9171521.1;Parent=gene-O5C65_001381;Dbxref=NCBI_GP:HJH9171521.1;Name=HJH9171521.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462182.1;locus_tag=O5C65_001381;product=protein/nucleic acid deglycase;protein_id=HJH9171521.1;transl_table=11 DALFDA020000008.1 tpg gene 29877 30512 . + . ID=gene-O5C65_001382;Name=O5C65_001382;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001382 DALFDA020000008.1 Protein Homology CDS 29877 30512 . + 0 ID=cds-HJH9171522.1;Parent=gene-O5C65_001382;Dbxref=NCBI_GP:HJH9171522.1;Name=HJH9171522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084527.1;locus_tag=O5C65_001382;product=NAD(P)H-binding protein;protein_id=HJH9171522.1;transl_table=11 DALFDA020000008.1 tpg gene 30579 31154 . - . ID=gene-O5C65_001383;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=O5C65_001383 DALFDA020000008.1 Protein Homology CDS 30579 31154 . - 0 ID=cds-HJH9171523.1;Parent=gene-O5C65_001383;Dbxref=NCBI_GP:HJH9171523.1;Name=HJH9171523.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462180.1;locus_tag=O5C65_001383;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=HJH9171523.1;transl_table=11 DALFDA020000008.1 tpg gene 31164 31754 . - . ID=gene-O5C65_001384;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=O5C65_001384 DALFDA020000008.1 Protein Homology CDS 31164 31754 . - 0 ID=cds-HJH9171524.1;Parent=gene-O5C65_001384;Dbxref=NCBI_GP:HJH9171524.1;Name=HJH9171524.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462179.1;locus_tag=O5C65_001384;product=DnaA initiator-associating protein DiaA;protein_id=HJH9171524.1;transl_table=11 DALFDA020000008.1 tpg gene 31776 32171 . - . ID=gene-O5C65_001385;Name=O5C65_001385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001385 DALFDA020000008.1 Protein Homology CDS 31776 32171 . - 0 ID=cds-HJH9171525.1;Parent=gene-O5C65_001385;Dbxref=NCBI_GP:HJH9171525.1;Name=HJH9171525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462178.1;locus_tag=O5C65_001385;product=YraN family protein;protein_id=HJH9171525.1;transl_table=11 DALFDA020000008.1 tpg gene 32129 34171 . - . ID=gene-O5C65_001386;Name=O5C65_001386;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001386 DALFDA020000008.1 Protein Homology CDS 32129 34171 . - 0 ID=cds-HJH9171526.1;Parent=gene-O5C65_001386;Dbxref=NCBI_GP:HJH9171526.1;Name=HJH9171526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462177.1;locus_tag=O5C65_001386;product=penicillin-binding protein activator;protein_id=HJH9171526.1;transl_table=11 DALFDA020000008.1 tpg gene 34235 35098 . + . ID=gene-O5C65_001387;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=O5C65_001387 DALFDA020000008.1 Protein Homology CDS 34235 35098 . + 0 ID=cds-HJH9171527.1;Parent=gene-O5C65_001387;Dbxref=NCBI_GP:HJH9171527.1;Name=HJH9171527.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462176.1;locus_tag=O5C65_001387;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=HJH9171527.1;transl_table=11 DALFDA020000008.1 tpg gene 35256 36029 . - . ID=gene-O5C65_001388;Name=O5C65_001388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001388 DALFDA020000008.1 Protein Homology CDS 35256 36029 . - 0 ID=cds-HJH9171528.1;Parent=gene-O5C65_001388;Dbxref=NCBI_GP:HJH9171528.1;Name=HJH9171528.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462175.1;locus_tag=O5C65_001388;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=HJH9171528.1;transl_table=11 DALFDA020000008.1 tpg gene 36140 37183 . - . ID=gene-O5C65_001389;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=O5C65_001389 DALFDA020000008.1 Protein Homology CDS 36140 37183 . - 0 ID=cds-HJH9171529.1;Parent=gene-O5C65_001389;Dbxref=NCBI_GP:HJH9171529.1;Name=HJH9171529.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=gatD;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462174.1;locus_tag=O5C65_001389;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=HJH9171529.1;transl_table=11 DALFDA020000008.1 tpg gene 37227 38600 . - . ID=gene-O5C65_001390;Name=O5C65_001390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001390 DALFDA020000008.1 Protein Homology CDS 37227 38600 . - 0 ID=cds-HJH9171530.1;Parent=gene-O5C65_001390;Dbxref=NCBI_GP:HJH9171530.1;Name=HJH9171530.1;Ontology_term=GO:0009401,GO:0015796,GO:0015577,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=galactitol transmembrane transporter activity|0015577||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,galactitol transmembrane transport|0015796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462173.1;locus_tag=O5C65_001390;product=galactitol-specific PTS transporter subunit IIC;protein_id=HJH9171530.1;transl_table=11 DALFDA020000008.1 tpg gene 38604 38888 . - . ID=gene-O5C65_001391;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=O5C65_001391 DALFDA020000008.1 Protein Homology CDS 38604 38888 . - 0 ID=cds-HJH9171531.1;Parent=gene-O5C65_001391;Dbxref=NCBI_GP:HJH9171531.1;Name=HJH9171531.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462172.1;locus_tag=O5C65_001391;product=PTS galactitol transporter subunit IIB;protein_id=HJH9171531.1;transl_table=11 DALFDA020000008.1 tpg gene 38919 39383 . - . ID=gene-O5C65_001392;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=O5C65_001392 DALFDA020000008.1 Protein Homology CDS 38919 39383 . - 0 ID=cds-HJH9171532.1;Parent=gene-O5C65_001392;Dbxref=NCBI_GP:HJH9171532.1;Name=HJH9171532.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462171.1;locus_tag=O5C65_001392;product=PTS galactitol transporter subunit IIA;protein_id=HJH9171532.1;transl_table=11 DALFDA020000008.1 tpg gene 39398 40669 . - . ID=gene-O5C65_001393;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=O5C65_001393 DALFDA020000008.1 Protein Homology CDS 39398 40669 . - 0 ID=cds-HJH9171533.1;Parent=gene-O5C65_001393;Dbxref=NCBI_GP:HJH9171533.1;Name=HJH9171533.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462170.1;locus_tag=O5C65_001393;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=HJH9171533.1;transl_table=11 DALFDA020000008.1 tpg gene 40789 41643 . - . ID=gene-O5C65_001394;Name=O5C65_001394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001394 DALFDA020000008.1 Protein Homology CDS 40789 41643 . - 0 ID=cds-HJH9171534.1;Parent=gene-O5C65_001394;Dbxref=NCBI_GP:HJH9171534.1;Name=HJH9171534.1;Ontology_term=GO:0005975,GO:0008270,GO:0009025;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462166.1;locus_tag=O5C65_001394;product=tagatose bisphosphate family class II aldolase;protein_id=HJH9171534.1;transl_table=11 DALFDA020000008.1 tpg gene 41901 43472 . - . ID=gene-O5C65_001395;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=O5C65_001395 DALFDA020000008.1 Protein Homology CDS 41901 43472 . - 0 ID=cds-HJH9171535.1;Parent=gene-O5C65_001395;Dbxref=NCBI_GP:HJH9171535.1;Name=HJH9171535.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462163.1;locus_tag=O5C65_001395;product=galactarate dehydratase;protein_id=HJH9171535.1;transl_table=11 DALFDA020000008.1 tpg gene 44002 44772 . + . ID=gene-O5C65_001396;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=O5C65_001396 DALFDA020000008.1 Protein Homology CDS 44002 44772 . + 0 ID=cds-HJH9171536.1;Parent=gene-O5C65_001396;Dbxref=NCBI_GP:HJH9171536.1;Name=HJH9171536.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462162.1;locus_tag=O5C65_001396;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=HJH9171536.1;transl_table=11 DALFDA020000008.1 tpg gene 44798 45688 . + . ID=gene-O5C65_001397;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=O5C65_001397 DALFDA020000008.1 Protein Homology CDS 44798 45688 . + 0 ID=cds-HJH9171537.1;Parent=gene-O5C65_001397;Dbxref=NCBI_GP:HJH9171537.1;Name=HJH9171537.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=O5C65_001397;product=2-hydroxy-3-oxopropionate reductase;protein_id=HJH9171537.1;transl_table=11 DALFDA020000008.1 tpg gene 45786 46931 . + . ID=gene-O5C65_001398;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=O5C65_001398 DALFDA020000008.1 Protein Homology CDS 45786 46931 . + 0 ID=cds-HJH9171538.1;Parent=gene-O5C65_001398;Dbxref=NCBI_GP:HJH9171538.1;Name=HJH9171538.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462160.1;locus_tag=O5C65_001398;product=glycerate 2-kinase;protein_id=HJH9171538.1;transl_table=11 DALFDA020000008.1 tpg gene 46964 47338 . + . ID=gene-O5C65_001399;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=O5C65_001399 DALFDA020000008.1 cmsearch RNase_P_RNA 46964 47338 . + . ID=rna-O5C65_001399;Parent=gene-O5C65_001399;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_001399;product=RNase P RNA component class A DALFDA020000008.1 cmsearch exon 46964 47338 . + . ID=exon-O5C65_001399-1;Parent=rna-O5C65_001399;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_001399;product=RNase P RNA component class A DALFDA020000008.1 tpg gene 48741 49679 . + . ID=gene-O5C65_001400;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=O5C65_001400 DALFDA020000008.1 Protein Homology CDS 48741 49679 . + 0 ID=cds-HJH9171539.1;Parent=gene-O5C65_001400;Dbxref=NCBI_GP:HJH9171539.1;Name=HJH9171539.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462159.1;locus_tag=O5C65_001400;product=transcriptional regulator TdcA;protein_id=HJH9171539.1;transl_table=11 DALFDA020000008.1 tpg gene 49777 50766 . + . ID=gene-O5C65_001401;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=O5C65_001401 DALFDA020000008.1 Protein Homology CDS 49777 50766 . + 0 ID=cds-HJH9171540.1;Parent=gene-O5C65_001401;Dbxref=NCBI_GP:HJH9171540.1;Name=HJH9171540.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462158.1;locus_tag=O5C65_001401;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=HJH9171540.1;transl_table=11 DALFDA020000008.1 tpg gene 50787 52118 . + . ID=gene-O5C65_001402;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=O5C65_001402 DALFDA020000008.1 Protein Homology CDS 50787 52118 . + 0 ID=cds-HJH9171541.1;Parent=gene-O5C65_001402;Dbxref=NCBI_GP:HJH9171541.1;Name=HJH9171541.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462157.1;locus_tag=O5C65_001402;product=threonine/serine transporter TdcC;protein_id=HJH9171541.1;transl_table=11 DALFDA020000008.1 tpg gene 52184 53392 . + . ID=gene-O5C65_001403;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=O5C65_001403 DALFDA020000008.1 Protein Homology CDS 52184 53392 . + 0 ID=cds-HJH9171542.1;Parent=gene-O5C65_001403;Dbxref=NCBI_GP:HJH9171542.1;Name=HJH9171542.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462156.1;locus_tag=O5C65_001403;product=propionate kinase;protein_id=HJH9171542.1;transl_table=11 DALFDA020000008.1 tpg gene 53426 55720 . + . ID=gene-O5C65_001404;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=O5C65_001404 DALFDA020000008.1 Protein Homology CDS 53426 55720 . + 0 ID=cds-HJH9171543.1;Parent=gene-O5C65_001404;Dbxref=NCBI_GP:HJH9171543.1;Name=HJH9171543.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462155.1;locus_tag=O5C65_001404;product=formate C-acetyltransferase;protein_id=HJH9171543.1;transl_table=11 DALFDA020000008.1 tpg gene 55790 57154 . + . ID=gene-O5C65_001405;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=protein_coding;locus_tag=O5C65_001405 DALFDA020000008.1 Protein Homology CDS 55790 57154 . + 0 ID=cds-HJH9171544.1;Parent=gene-O5C65_001405;Dbxref=NCBI_GP:HJH9171544.1;Name=HJH9171544.1;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462154.1;locus_tag=O5C65_001405;product=L-serine ammonia-lyase;protein_id=HJH9171544.1;transl_table=11 DALFDA020000008.1 tpg gene 57470 58801 . + . ID=gene-O5C65_001406;Name=O5C65_001406;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001406 DALFDA020000008.1 Protein Homology CDS 57470 58801 . + 0 ID=cds-HJH9171545.1;Parent=gene-O5C65_001406;Dbxref=NCBI_GP:HJH9171545.1;Name=HJH9171545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462153.1;locus_tag=O5C65_001406;product=amino acid permease;protein_id=HJH9171545.1;transl_table=11 DALFDA020000008.1 tpg gene 58827 60137 . + . ID=gene-O5C65_001407;Name=O5C65_001407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001407 DALFDA020000008.1 Protein Homology CDS 58827 60137 . + 0 ID=cds-HJH9171546.1;Parent=gene-O5C65_001407;Dbxref=NCBI_GP:HJH9171546.1;Name=HJH9171546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675866.1;locus_tag=O5C65_001407;product=serine dehydratase subunit alpha family protein;protein_id=HJH9171546.1;transl_table=11 DALFDA020000008.1 tpg gene 60250 60414 . - . ID=gene-O5C65_001408;Name=O5C65_001408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001408 DALFDA020000008.1 Protein Homology CDS 60250 60414 . - 0 ID=cds-HJH9171547.1;Parent=gene-O5C65_001408;Dbxref=NCBI_GP:HJH9171547.1;Name=HJH9171547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462151.1;locus_tag=O5C65_001408;product=hypothetical protein;protein_id=HJH9171547.1;transl_table=11 DALFDA020000008.1 tpg gene 60438 61139 . - . ID=gene-O5C65_001409;Name=O5C65_001409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001409 DALFDA020000008.1 Protein Homology CDS 60438 61139 . - 0 ID=cds-HJH9171548.1;Parent=gene-O5C65_001409;Dbxref=NCBI_GP:HJH9171548.1;Name=HJH9171548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462150.1;locus_tag=O5C65_001409;product=pirin family protein;protein_id=HJH9171548.1;transl_table=11 DALFDA020000008.1 tpg gene 61244 62140 . + . ID=gene-O5C65_001410;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=O5C65_001410 DALFDA020000008.1 Protein Homology CDS 61244 62140 . + 0 ID=cds-HJH9171549.1;Parent=gene-O5C65_001410;Dbxref=NCBI_GP:HJH9171549.1;Name=HJH9171549.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462149.1;locus_tag=O5C65_001410;product=DNA-binding transcriptional regulator YhaJ;protein_id=HJH9171549.1;transl_table=11 DALFDA020000008.1 tpg gene 62179 62544 . - . ID=gene-O5C65_001411;Name=O5C65_001411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001411 DALFDA020000008.1 Protein Homology CDS 62179 62544 . - 0 ID=cds-HJH9171550.1;Parent=gene-O5C65_001411;Dbxref=NCBI_GP:HJH9171550.1;Name=HJH9171550.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462148.1;locus_tag=O5C65_001411;product=DUF805 domain-containing protein;protein_id=HJH9171550.1;transl_table=11 DALFDA020000008.1 tpg gene 62668 63654 . - . ID=gene-O5C65_001412;Name=O5C65_001412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001412 DALFDA020000008.1 Protein Homology CDS 62668 63654 . - 0 ID=cds-HJH9171551.1;Parent=gene-O5C65_001412;Dbxref=NCBI_GP:HJH9171551.1;Name=HJH9171551.1;Ontology_term=GO:0004364,GO:0016491;gbkey=CDS;go_function=glutathione transferase activity|0004364||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462147.1;locus_tag=O5C65_001412;product=glutathione S-transferase family protein;protein_id=HJH9171551.1;transl_table=11 DALFDA020000008.1 tpg gene 63722 64114 . - . ID=gene-O5C65_001413;Name=O5C65_001413;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001413 DALFDA020000008.1 Protein Homology CDS 63722 64114 . - 0 ID=cds-HJH9171552.1;Parent=gene-O5C65_001413;Dbxref=NCBI_GP:HJH9171552.1;Name=HJH9171552.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=O5C65_001413;product=DoxX family protein;protein_id=HJH9171552.1;transl_table=11 DALFDA020000008.1 tpg gene 64362 64661 . - . ID=gene-O5C65_001414;Name=O5C65_001414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001414 DALFDA020000008.1 Protein Homology CDS 64362 64661 . - 0 ID=cds-HJH9171553.1;Parent=gene-O5C65_001414;Dbxref=NCBI_GP:HJH9171553.1;Name=HJH9171553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462145.1;locus_tag=O5C65_001414;product=YqjK-like family protein;protein_id=HJH9171553.1;transl_table=11 DALFDA020000008.1 tpg gene 64658 65056 . - . ID=gene-O5C65_001415;Name=O5C65_001415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001415 DALFDA020000008.1 Protein Homology CDS 64658 65056 . - 0 ID=cds-HJH9171554.1;Parent=gene-O5C65_001415;Dbxref=NCBI_GP:HJH9171554.1;Name=HJH9171554.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462144.1;locus_tag=O5C65_001415;product=phage holin family protein;protein_id=HJH9171554.1;transl_table=11 DALFDA020000008.1 tpg gene 65059 65364 . - . ID=gene-O5C65_001416;Name=O5C65_001416;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001416 DALFDA020000008.1 Protein Homology CDS 65059 65364 . - 0 ID=cds-HJH9171555.1;Parent=gene-O5C65_001416;Dbxref=NCBI_GP:HJH9171555.1;Name=HJH9171555.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462143.1;locus_tag=O5C65_001416;product=DUF883 family protein;protein_id=HJH9171555.1;transl_table=11 DALFDA020000008.1 tpg gene 65406 65774 . - . ID=gene-O5C65_001417;Name=O5C65_001417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001417 DALFDA020000008.1 Protein Homology CDS 65406 65774 . - 0 ID=cds-HJH9171556.1;Parent=gene-O5C65_001417;Dbxref=NCBI_GP:HJH9171556.1;Name=HJH9171556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462142.1;locus_tag=O5C65_001417;product=DUF1090 domain-containing protein;protein_id=HJH9171556.1;transl_table=11 DALFDA020000008.1 tpg gene 65919 66302 . - . ID=gene-O5C65_001418;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=O5C65_001418 DALFDA020000008.1 Protein Homology CDS 65919 66302 . - 0 ID=cds-HJH9171557.1;Parent=gene-O5C65_001418;Dbxref=NCBI_GP:HJH9171557.1;Name=HJH9171557.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462141.1;locus_tag=O5C65_001418;product=EnvZ/OmpR regulon moderator MzrA;protein_id=HJH9171557.1;transl_table=11 DALFDA020000008.1 tpg gene 66306 66968 . - . ID=gene-O5C65_001419;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=O5C65_001419 DALFDA020000008.1 Protein Homology CDS 66306 66968 . - 0 ID=cds-HJH9171558.1;Parent=gene-O5C65_001419;Dbxref=NCBI_GP:HJH9171558.1;Name=HJH9171558.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462140.1;locus_tag=O5C65_001419;product=DedA family general envelope maintenance protein YqjA;protein_id=HJH9171558.1;transl_table=11 DALFDA020000008.1 tpg gene 67418 68662 . - . ID=gene-O5C65_001420;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=O5C65_001420 DALFDA020000008.1 Protein Homology CDS 67418 68662 . - 0 ID=cds-HJH9171559.1;Parent=gene-O5C65_001420;Dbxref=NCBI_GP:HJH9171559.1;Name=HJH9171559.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462139.1;locus_tag=O5C65_001420;product=serine/threonine transporter SstT;protein_id=HJH9171559.1;transl_table=11 DALFDA020000008.1 tpg gene 68917 69885 . - . ID=gene-O5C65_001421;Name=O5C65_001421;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001421 DALFDA020000008.1 Protein Homology CDS 68917 69885 . - 0 ID=cds-HJH9171560.1;Parent=gene-O5C65_001421;Dbxref=NCBI_GP:HJH9171560.1;Name=HJH9171560.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462138.1;locus_tag=O5C65_001421;product=TerC family protein;protein_id=HJH9171560.1;transl_table=11 DALFDA020000008.1 tpg gene 70156 71154 . - . ID=gene-O5C65_001422;Name=O5C65_001422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001422 DALFDA020000008.1 Protein Homology CDS 70156 71154 . - 0 ID=cds-HJH9171561.1;Parent=gene-O5C65_001422;Dbxref=NCBI_GP:HJH9171561.1;Name=HJH9171561.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462137.1;locus_tag=O5C65_001422;product=Gfo/Idh/MocA family protein;protein_id=HJH9171561.1;transl_table=11 DALFDA020000008.1 tpg gene 71243 71935 . - . ID=gene-O5C65_001423;Name=O5C65_001423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001423 DALFDA020000008.1 Protein Homology CDS 71243 71935 . - 0 ID=cds-HJH9171562.1;Parent=gene-O5C65_001423;Dbxref=NCBI_GP:HJH9171562.1;Name=HJH9171562.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462136.1;locus_tag=O5C65_001423;product=SanA/YdcF family protein;protein_id=HJH9171562.1;transl_table=11 DALFDA020000008.1 tpg gene 72087 72584 . - . ID=gene-O5C65_001424;Name=O5C65_001424;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001424 DALFDA020000008.1 Protein Homology CDS 72087 72584 . - 0 ID=cds-HJH9171563.1;Parent=gene-O5C65_001424;Dbxref=NCBI_GP:HJH9171563.1;Name=HJH9171563.1;Ontology_term=GO:0006508,GO:0008237,GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462135.1;locus_tag=O5C65_001424;product=M48 family metallopeptidase;protein_id=HJH9171563.1;transl_table=11 DALFDA020000008.1 tpg gene 72670 73806 . + . ID=gene-O5C65_001425;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=O5C65_001425 DALFDA020000008.1 Protein Homology CDS 72670 73806 . + 0 ID=cds-HJH9171564.1;Parent=gene-O5C65_001425;Dbxref=NCBI_GP:HJH9171564.1;Name=HJH9171564.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462134.1;locus_tag=O5C65_001425;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=HJH9171564.1;transl_table=11 DALFDA020000008.1 tpg gene 73887 75905 . - . ID=gene-O5C65_001426;Name=O5C65_001426;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001426 DALFDA020000008.1 Protein Homology CDS 73887 75905 . - 0 ID=cds-HJH9171565.1;Parent=gene-O5C65_001426;Dbxref=NCBI_GP:HJH9171565.1;Name=HJH9171565.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462133.1;locus_tag=O5C65_001426;product=FAD-dependent oxidoreductase;protein_id=HJH9171565.1;transl_table=11 DALFDA020000008.1 tpg gene 76076 77455 . - . ID=gene-O5C65_001427;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=O5C65_001427 DALFDA020000008.1 Protein Homology CDS 76076 77455 . - 0 ID=cds-HJH9171566.1;Parent=gene-O5C65_001427;Dbxref=NCBI_GP:HJH9171566.1;Name=HJH9171566.1;Ontology_term=GO:0009447,GO:0030170,GO:0033094;gbkey=CDS;gene=ygjG;go_function=pyridoxal phosphate binding|0030170||IEA,putrescine--2-oxoglutarate transaminase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894971.1;locus_tag=O5C65_001427;product=putrescine aminotransferase;protein_id=HJH9171566.1;transl_table=11 DALFDA020000008.1 tpg gene 77885 79405 . + . ID=gene-O5C65_001428;Name=O5C65_001428;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001428 DALFDA020000008.1 Protein Homology CDS 77885 79405 . + 0 ID=cds-HJH9171567.1;Parent=gene-O5C65_001428;Dbxref=NCBI_GP:HJH9171567.1;Name=HJH9171567.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462131.1;locus_tag=O5C65_001428;product=methyl-accepting chemotaxis protein;protein_id=HJH9171567.1;transl_table=11 DALFDA020000008.1 tpg gene 79793 81358 . + . ID=gene-O5C65_001429;Name=O5C65_001429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001429 DALFDA020000008.1 Protein Homology CDS 79793 81358 . + 0 ID=cds-HJH9171568.1;Parent=gene-O5C65_001429;Dbxref=NCBI_GP:HJH9171568.1;Name=HJH9171568.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462130.1;locus_tag=O5C65_001429;product=methyl-accepting chemotaxis protein;protein_id=HJH9171568.1;transl_table=11 DALFDA020000008.1 tpg gene 81355 82002 . - . ID=gene-O5C65_001430;Name=O5C65_001430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001430 DALFDA020000008.1 Protein Homology CDS 81355 82002 . - 0 ID=cds-HJH9171569.1;Parent=gene-O5C65_001430;Dbxref=NCBI_GP:HJH9171569.1;Name=HJH9171569.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462129.1;locus_tag=O5C65_001430;product=PadR family transcriptional regulator;protein_id=HJH9171569.1;transl_table=11 DALFDA020000008.1 tpg gene 82234 83001 . + . ID=gene-O5C65_001431;Name=O5C65_001431;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001431 DALFDA020000008.1 Protein Homology CDS 82234 83001 . + 0 ID=cds-HJH9171570.1;Parent=gene-O5C65_001431;Dbxref=NCBI_GP:HJH9171570.1;Name=HJH9171570.1;Ontology_term=GO:0015891,GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462128.1;locus_tag=O5C65_001431;product=siderophore-interacting protein;protein_id=HJH9171570.1;transl_table=11 DALFDA020000008.1 tpg gene 83212 84249 . - . ID=gene-O5C65_001432;Name=O5C65_001432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001432 DALFDA020000008.1 Protein Homology CDS 83212 84249 . - 0 ID=cds-HJH9171571.1;Parent=gene-O5C65_001432;Dbxref=NCBI_GP:HJH9171571.1;Name=HJH9171571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001145218.1;locus_tag=O5C65_001432;product=phage integrase;protein_id=HJH9171571.1;transl_table=11 DALFDA020000008.1 tpg gene 84253 84819 . - . ID=gene-O5C65_001433;Name=O5C65_001433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001433 DALFDA020000008.1 Protein Homology CDS 84253 84819 . - 0 ID=cds-HJH9171572.1;Parent=gene-O5C65_001433;Dbxref=NCBI_GP:HJH9171572.1;Name=HJH9171572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014885296.1;locus_tag=O5C65_001433;product=PH domain-containing protein;protein_id=HJH9171572.1;transl_table=11 DALFDA020000008.1 tpg gene 84836 85417 . - . ID=gene-O5C65_001434;Name=O5C65_001434;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001434 DALFDA020000008.1 Protein Homology CDS 84836 85417 . - 0 ID=cds-HJH9171573.1;Parent=gene-O5C65_001434;Dbxref=NCBI_GP:HJH9171573.1;Name=HJH9171573.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000514631.1;locus_tag=O5C65_001434;product=phage repressor protein CI;protein_id=HJH9171573.1;transl_table=11 DALFDA020000008.1 tpg gene 85558 85779 . + . ID=gene-O5C65_001435;Name=O5C65_001435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001435 DALFDA020000008.1 Protein Homology CDS 85558 85779 . + 0 ID=cds-HJH9171574.1;Parent=gene-O5C65_001435;Dbxref=NCBI_GP:HJH9171574.1;Name=HJH9171574.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010836041.1;locus_tag=O5C65_001435;product=helix-turn-helix transcriptional regulator;protein_id=HJH9171574.1;transl_table=11 DALFDA020000008.1 tpg gene 85810 86313 . + . ID=gene-O5C65_001436;Name=O5C65_001436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001436 DALFDA020000008.1 Protein Homology CDS 85810 86313 . + 0 ID=cds-HJH9171575.1;Parent=gene-O5C65_001436;Dbxref=NCBI_GP:HJH9171575.1;Name=HJH9171575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000460876.1;locus_tag=O5C65_001436;product=phage regulatory CII family protein;protein_id=HJH9171575.1;transl_table=11 DALFDA020000008.1 tpg gene 86323 86550 . + . ID=gene-O5C65_001437;Name=O5C65_001437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001437 DALFDA020000008.1 Protein Homology CDS 86323 86550 . + 0 ID=cds-HJH9171576.1;Parent=gene-O5C65_001437;Dbxref=NCBI_GP:HJH9171576.1;Name=HJH9171576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000643374.1;locus_tag=O5C65_001437;product=phage filamentation protein Fil family protein;protein_id=HJH9171576.1;transl_table=11 DALFDA020000008.1 tpg gene 86540 86965 . + . ID=gene-O5C65_001438;Name=O5C65_001438;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001438 DALFDA020000008.1 Protein Homology CDS 86540 86965 . + 0 ID=cds-HJH9171577.1;Parent=gene-O5C65_001438;Dbxref=NCBI_GP:HJH9171577.1;Name=HJH9171577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996837.1;locus_tag=O5C65_001438;product=hypothetical protein;protein_id=HJH9171577.1;transl_table=11 DALFDA020000008.1 tpg gene 86965 87366 . + . ID=gene-O5C65_001439;Name=O5C65_001439;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001439 DALFDA020000008.1 Protein Homology CDS 86965 87366 . + 0 ID=cds-HJH9171578.1;Parent=gene-O5C65_001439;Dbxref=NCBI_GP:HJH9171578.1;Name=HJH9171578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738709.1;locus_tag=O5C65_001439;product=hypothetical protein;protein_id=HJH9171578.1;transl_table=11 DALFDA020000008.1 tpg gene 87434 87667 . + . ID=gene-O5C65_001440;Name=O5C65_001440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001440 DALFDA020000008.1 Protein Homology CDS 87434 87667 . + 0 ID=cds-HJH9171579.1;Parent=gene-O5C65_001440;Dbxref=NCBI_GP:HJH9171579.1;Name=HJH9171579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738711.1;locus_tag=O5C65_001440;product=DUF2732 family protein;protein_id=HJH9171579.1;transl_table=11 DALFDA020000008.1 tpg gene 87658 88518 . + . ID=gene-O5C65_001441;Name=O5C65_001441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001441 DALFDA020000008.1 Protein Homology CDS 87658 88518 . + 0 ID=cds-HJH9171580.1;Parent=gene-O5C65_001441;Dbxref=NCBI_GP:HJH9171580.1;Name=HJH9171580.1;Ontology_term=GO:0032775,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000279404.1;locus_tag=O5C65_001441;product=DNA adenine methylase;protein_id=HJH9171580.1;transl_table=11 DALFDA020000008.1 tpg gene 88515 90536 . + . ID=gene-O5C65_001442;Name=O5C65_001442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001442 DALFDA020000008.1 Protein Homology CDS 88515 90536 . + 0 ID=cds-HJH9171581.1;Parent=gene-O5C65_001442;Dbxref=NCBI_GP:HJH9171581.1;Name=HJH9171581.1;Ontology_term=GO:0006260,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000170880.1;locus_tag=O5C65_001442;product=replication endonuclease;protein_id=HJH9171581.1;transl_table=11 DALFDA020000008.1 tpg gene 90656 90862 . + . ID=gene-O5C65_001443;Name=O5C65_001443;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001443 DALFDA020000008.1 Protein Homology CDS 90656 90862 . + 0 ID=cds-HJH9171582.1;Parent=gene-O5C65_001443;Dbxref=NCBI_GP:HJH9171582.1;Name=HJH9171582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000353144.1;locus_tag=O5C65_001443;product=hypothetical protein;protein_id=HJH9171582.1;transl_table=11 DALFDA020000008.1 tpg gene 90836 91159 . - . ID=gene-O5C65_001444;Name=O5C65_001444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001444 DALFDA020000008.1 Protein Homology CDS 90836 91159 . - 0 ID=cds-HJH9171583.1;Parent=gene-O5C65_001444;Dbxref=NCBI_GP:HJH9171583.1;Name=HJH9171583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001552031.1;locus_tag=O5C65_001444;product=ogr/Delta-like zinc finger family protein;protein_id=HJH9171583.1;transl_table=11 DALFDA020000008.1 tpg gene 91156 92217 . - . ID=gene-O5C65_001445;Name=O5C65_001445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001445 DALFDA020000008.1 Protein Homology CDS 91156 92217 . - 0 ID=cds-HJH9171584.1;Parent=gene-O5C65_001445;Dbxref=NCBI_GP:HJH9171584.1;Name=HJH9171584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000038213.1;locus_tag=O5C65_001445;product=phage portal protein;protein_id=HJH9171584.1;transl_table=11 DALFDA020000008.1 tpg gene 92214 93989 . - . ID=gene-O5C65_001446;Name=O5C65_001446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001446 DALFDA020000008.1 Protein Homology CDS 92214 93989 . - 0 ID=cds-HJH9171585.1;Parent=gene-O5C65_001446;Dbxref=NCBI_GP:HJH9171585.1;Name=HJH9171585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151939.1;locus_tag=O5C65_001446;product=terminase large subunit domain-containing protein;protein_id=HJH9171585.1;transl_table=11 DALFDA020000008.1 tpg gene 94150 94953 . + . ID=gene-O5C65_001447;Name=O5C65_001447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001447 DALFDA020000008.1 Protein Homology CDS 94150 94953 . + 0 ID=cds-HJH9171586.1;Parent=gene-O5C65_001447;Dbxref=NCBI_GP:HJH9171586.1;Name=HJH9171586.1;Ontology_term=GO:0019069;gbkey=CDS;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000018795.1;locus_tag=O5C65_001447;product=GPO family capsid scaffolding protein;protein_id=HJH9171586.1;transl_table=11 DALFDA020000008.1 tpg gene 95015 96037 . + . ID=gene-O5C65_001448;Name=O5C65_001448;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001448 DALFDA020000008.1 Protein Homology CDS 95015 96037 . + 0 ID=cds-HJH9171587.1;Parent=gene-O5C65_001448;Dbxref=NCBI_GP:HJH9171587.1;Name=HJH9171587.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000550496.1;locus_tag=O5C65_001448;product=phage major capsid protein%2C P2 family;protein_id=HJH9171587.1;transl_table=11 DALFDA020000008.1 tpg gene 96041 96742 . + . ID=gene-O5C65_001449;Name=gpM;gbkey=Gene;gene=gpM;gene_biotype=protein_coding;locus_tag=O5C65_001449 DALFDA020000008.1 Protein Homology CDS 96041 96742 . + 0 ID=cds-HJH9171588.1;Parent=gene-O5C65_001449;Dbxref=NCBI_GP:HJH9171588.1;Name=HJH9171588.1;Ontology_term=GO:0019069,GO:0003677,GO:0004519;gbkey=CDS;gene=gpM;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218529.1;locus_tag=O5C65_001449;product=phage terminase small subunit;protein_id=HJH9171588.1;transl_table=11 DALFDA020000008.1 tpg gene 96839 97291 . + . ID=gene-O5C65_001450;Name=O5C65_001450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001450 DALFDA020000008.1 Protein Homology CDS 96839 97291 . + 0 ID=cds-HJH9171589.1;Parent=gene-O5C65_001450;Dbxref=NCBI_GP:HJH9171589.1;Name=HJH9171589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738723.1;locus_tag=O5C65_001450;product=head completion/stabilization protein;protein_id=HJH9171589.1;transl_table=11 DALFDA020000008.1 tpg gene 97288 97794 . + . ID=gene-O5C65_001451;Name=O5C65_001451;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001451 DALFDA020000008.1 Protein Homology CDS 97288 97794 . + 0 ID=cds-HJH9171590.1;Parent=gene-O5C65_001451;Dbxref=NCBI_GP:HJH9171590.1;Name=HJH9171590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084219.1;locus_tag=O5C65_001451;product=phage tail protein;protein_id=HJH9171590.1;transl_table=11 DALFDA020000008.1 tpg gene 97791 98498 . + . ID=gene-O5C65_001452;Name=O5C65_001452;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001452 DALFDA020000008.1 Protein Homology CDS 97791 98498 . + 0 ID=cds-HJH9171591.1;Parent=gene-O5C65_001452;Dbxref=NCBI_GP:HJH9171591.1;Name=HJH9171591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560077.1;locus_tag=O5C65_001452;product=hypothetical protein;protein_id=HJH9171591.1;transl_table=11 DALFDA020000008.1 tpg gene 98495 99622 . + . ID=gene-O5C65_001453;Name=O5C65_001453;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001453 DALFDA020000008.1 Protein Homology CDS 98495 99622 . + 0 ID=cds-HJH9171592.1;Parent=gene-O5C65_001453;Dbxref=NCBI_GP:HJH9171592.1;Name=HJH9171592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748631.1;locus_tag=O5C65_001453;product=DUF2586 domain-containing protein;protein_id=HJH9171592.1;transl_table=11 DALFDA020000008.1 tpg gene 99619 100074 . + . ID=gene-O5C65_001454;Name=O5C65_001454;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001454 DALFDA020000008.1 Protein Homology CDS 99619 100074 . + 0 ID=cds-HJH9171593.1;Parent=gene-O5C65_001454;Dbxref=NCBI_GP:HJH9171593.1;Name=HJH9171593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000044254.1;locus_tag=O5C65_001454;product=phage protein;protein_id=HJH9171593.1;transl_table=11 DALFDA020000008.1 tpg gene 100084 100377 . + . ID=gene-O5C65_001455;Name=O5C65_001455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001455 DALFDA020000008.1 Protein Homology CDS 100084 100377 . + 0 ID=cds-HJH9171594.1;Parent=gene-O5C65_001455;Dbxref=NCBI_GP:HJH9171594.1;Name=HJH9171594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001154425.1;locus_tag=O5C65_001455;product=phage holin family protein;protein_id=HJH9171594.1;transl_table=11 DALFDA020000008.1 tpg gene 100374 100715 . + . ID=gene-O5C65_001456;Name=O5C65_001456;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001456 DALFDA020000008.1 Protein Homology CDS 100374 100715 . + 0 ID=cds-HJH9171595.1;Parent=gene-O5C65_001456;Dbxref=NCBI_GP:HJH9171595.1;Name=HJH9171595.1;Ontology_term=GO:0006508,GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007710822.1;locus_tag=O5C65_001456;product=M15 family metallopeptidase;protein_id=HJH9171595.1;transl_table=11 DALFDA020000008.1 tpg gene 100715 101047 . + . ID=gene-O5C65_001457;Name=O5C65_001457;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001457 DALFDA020000008.1 Protein Homology CDS 100715 101047 . + 0 ID=cds-HJH9171596.1;Parent=gene-O5C65_001457;Dbxref=NCBI_GP:HJH9171596.1;Name=HJH9171596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376378.1;locus_tag=O5C65_001457;product=hypothetical protein;protein_id=HJH9171596.1;transl_table=11 DALFDA020000008.1 tpg gene 101019 101207 . + . ID=gene-O5C65_001458;Name=O5C65_001458;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001458 DALFDA020000008.1 Protein Homology CDS 101019 101207 . + 0 ID=cds-HJH9171597.1;Parent=gene-O5C65_001458;Dbxref=NCBI_GP:HJH9171597.1;Name=HJH9171597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669961.1;locus_tag=O5C65_001458;product=hypothetical protein;protein_id=HJH9171597.1;transl_table=11 DALFDA020000008.1 tpg gene 101194 101451 . + . ID=gene-O5C65_001459;Name=O5C65_001459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001459 DALFDA020000008.1 Protein Homology CDS 101194 101451 . + 0 ID=cds-HJH9171598.1;Parent=gene-O5C65_001459;Dbxref=NCBI_GP:HJH9171598.1;Name=HJH9171598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000435058.1;locus_tag=O5C65_001459;product=putative phage tail assembly chaperone;protein_id=HJH9171598.1;transl_table=11 DALFDA020000008.1 tpg gene 101499 101642 . + . ID=gene-O5C65_001460;Name=O5C65_001460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001460 DALFDA020000008.1 Protein Homology CDS 101499 101642 . + 0 ID=cds-HJH9171599.1;Parent=gene-O5C65_001460;Dbxref=NCBI_GP:HJH9171599.1;Name=HJH9171599.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046438.2;locus_tag=O5C65_001460;product=DUF6890 family protein;protein_id=HJH9171599.1;transl_table=11 DALFDA020000008.1 tpg gene 101639 103609 . + . ID=gene-O5C65_001461;Name=O5C65_001461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001461 DALFDA020000008.1 Protein Homology CDS 101639 103609 . + 0 ID=cds-HJH9171600.1;Parent=gene-O5C65_001461;Dbxref=NCBI_GP:HJH9171600.1;Name=HJH9171600.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000811087.1;locus_tag=O5C65_001461;product=phage tail tape measure protein;protein_id=HJH9171600.1;transl_table=11 DALFDA020000008.1 tpg gene 103606 103935 . + . ID=gene-O5C65_001462;Name=O5C65_001462;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001462 DALFDA020000008.1 Protein Homology CDS 103606 103935 . + 0 ID=cds-HJH9171601.1;Parent=gene-O5C65_001462;Dbxref=NCBI_GP:HJH9171601.1;Name=HJH9171601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001289823.1;locus_tag=O5C65_001462;product=DUF2590 family protein;protein_id=HJH9171601.1;transl_table=11 DALFDA020000008.1 tpg gene 103932 105116 . + . ID=gene-O5C65_001463;Name=O5C65_001463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001463 DALFDA020000008.1 Protein Homology CDS 103932 105116 . + 0 ID=cds-HJH9171602.1;Parent=gene-O5C65_001463;Dbxref=NCBI_GP:HJH9171602.1;Name=HJH9171602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507090.1;locus_tag=O5C65_001463;product=baseplate J/gp47 family protein;protein_id=HJH9171602.1;transl_table=11 DALFDA020000008.1 tpg gene 105109 105696 . + . ID=gene-O5C65_001464;Name=O5C65_001464;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001464 DALFDA020000008.1 Protein Homology CDS 105109 105696 . + 0 ID=cds-HJH9171603.1;Parent=gene-O5C65_001464;Dbxref=NCBI_GP:HJH9171603.1;Name=HJH9171603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006772868.1;locus_tag=O5C65_001464;product=phage tail protein;protein_id=HJH9171603.1;transl_table=11 DALFDA020000008.1 tpg gene 105706 107946 . + . ID=gene-O5C65_001465;Name=O5C65_001465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001465 DALFDA020000008.1 Protein Homology CDS 105706 107946 . + 0 ID=cds-HJH9171604.1;Parent=gene-O5C65_001465;Dbxref=NCBI_GP:HJH9171604.1;Name=HJH9171604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534882.1;locus_tag=O5C65_001465;product=phage tail protein;protein_id=HJH9171604.1;transl_table=11 DALFDA020000008.1 tpg gene 107916 108521 . + . ID=gene-O5C65_001466;Name=O5C65_001466;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001466 DALFDA020000008.1 Protein Homology CDS 107916 108521 . + 0 ID=cds-HJH9171605.1;Parent=gene-O5C65_001466;Dbxref=NCBI_GP:HJH9171605.1;Name=HJH9171605.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015701331.1;locus_tag=O5C65_001466;product=tail fiber assembly protein;protein_id=HJH9171605.1;transl_table=11 DALFDA020000008.1 tpg gene 108511 109236 . + . ID=gene-O5C65_001467;Name=O5C65_001467;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001467 DALFDA020000008.1 Protein Homology CDS 108511 109236 . + 0 ID=cds-HJH9171606.1;Parent=gene-O5C65_001467;Dbxref=NCBI_GP:HJH9171606.1;Name=HJH9171606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000267957.1;locus_tag=O5C65_001467;product=hypothetical protein;protein_id=HJH9171606.1;transl_table=11 DALFDA020000008.1 tpg gene 109208 109753 . + . ID=gene-O5C65_001468;Name=O5C65_001468;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001468 DALFDA020000008.1 Protein Homology CDS 109208 109753 . + 0 ID=cds-HJH9171607.1;Parent=gene-O5C65_001468;Dbxref=NCBI_GP:HJH9171607.1;Name=HJH9171607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000200792.1;locus_tag=O5C65_001468;product=hypothetical protein;protein_id=HJH9171607.1;transl_table=11 DALFDA020000008.1 tpg gene 109753 111456 . + . ID=gene-O5C65_001469;Name=O5C65_001469;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001469 DALFDA020000008.1 Protein Homology CDS 109753 111456 . + 0 ID=cds-HJH9171608.1;Parent=gene-O5C65_001469;Dbxref=NCBI_GP:HJH9171608.1;Name=HJH9171608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534868.1;locus_tag=O5C65_001469;product=hypothetical protein;protein_id=HJH9171608.1;transl_table=11 DALFDA020000008.1 tpg gene 112106 112729 . - . ID=gene-O5C65_001470;Name=O5C65_001470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001470 DALFDA020000008.1 GeneMarkS-2+ CDS 112106 112729 . - 0 ID=cds-HJH9171609.1;Parent=gene-O5C65_001470;Dbxref=NCBI_GP:HJH9171609.1;Name=HJH9171609.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_001470;product=hypothetical protein;protein_id=HJH9171609.1;transl_table=11 DALFDA020000008.1 tpg gene 112841 112916 . - . ID=gene-O5C65_001471;Name=O5C65_001471;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_001471 DALFDA020000008.1 tRNAscan-SE tRNA 112841 112916 . - . ID=rna-O5C65_001471;Parent=gene-O5C65_001471;anticodon=(pos:complement(112881..112883));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_001471;product=tRNA-Ile DALFDA020000008.1 tRNAscan-SE exon 112841 112916 . - . ID=exon-O5C65_001471-1;Parent=rna-O5C65_001471;anticodon=(pos:complement(112881..112883));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_001471;product=tRNA-Ile DALFDA020000008.1 tpg gene 113042 113548 . + . ID=gene-O5C65_001472;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=O5C65_001472 DALFDA020000008.1 Protein Homology CDS 113042 113548 . + 0 ID=cds-HJH9171610.1;Parent=gene-O5C65_001472;Dbxref=NCBI_GP:HJH9171610.1;Name=HJH9171610.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462127.1;locus_tag=O5C65_001472;product=G/U mismatch-specific DNA glycosylase;protein_id=HJH9171610.1;transl_table=11 DALFDA020000008.1 tpg gene 113672 115654 . - . ID=gene-O5C65_001473;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=O5C65_001473 DALFDA020000008.1 Protein Homology CDS 113672 115654 . - 0 ID=cds-HJH9171611.1;Parent=gene-O5C65_001473;Dbxref=NCBI_GP:HJH9171611.1;Name=HJH9171611.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF004208.0;locus_tag=O5C65_001473;product=RNA polymerase sigma factor RpoD;protein_id=HJH9171611.1;transl_table=11 DALFDA020000008.1 tpg gene 115669 117414 . - . ID=gene-O5C65_001474;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=O5C65_001474 DALFDA020000008.1 Protein Homology CDS 115669 117414 . - 0 ID=cds-HJH9171612.1;Parent=gene-O5C65_001474;Dbxref=NCBI_GP:HJH9171612.1;Name=HJH9171612.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462125.1;locus_tag=O5C65_001474;product=DNA primase;protein_id=HJH9171612.1;transl_table=11 DALFDA020000008.1 tpg gene 117650 117865 . - . ID=gene-O5C65_001475;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=O5C65_001475 DALFDA020000008.1 Protein Homology CDS 117650 117865 . - 0 ID=cds-HJH9171613.1;Parent=gene-O5C65_001475;Dbxref=NCBI_GP:HJH9171613.1;Name=HJH9171613.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=O5C65_001475;product=30S ribosomal protein S21;protein_id=HJH9171613.1;transl_table=11 DALFDA020000008.1 tpg gene 118093 119106 . + . ID=gene-O5C65_001476;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=O5C65_001476 DALFDA020000008.1 Protein Homology CDS 118093 119106 . + 0 ID=cds-HJH9171614.1;Parent=gene-O5C65_001476;Dbxref=NCBI_GP:HJH9171614.1;Name=HJH9171614.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=O5C65_001476;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=HJH9171614.1;transl_table=11 DALFDA020000008.1 tpg pseudogene 119229 119372 . - . ID=gene-O5C65_001477;Name=O5C65_001477;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_001477;pseudo=true DALFDA020000008.1 Protein Homology CDS 119229 119372 . - 0 ID=cds-O5C65_001477;Parent=gene-O5C65_001477;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311971.1;locus_tag=O5C65_001477;product=fumarate hydratase;pseudo=true;transl_table=11 DALFDA020000008.1 tpg gene 119356 119967 . - . ID=gene-O5C65_001478;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=O5C65_001478 DALFDA020000008.1 Protein Homology CDS 119356 119967 . - 0 ID=cds-HJH9171615.1;Parent=gene-O5C65_001478;Dbxref=NCBI_GP:HJH9171615.1;Name=HJH9171615.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462122.1;locus_tag=O5C65_001478;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=HJH9171615.1;transl_table=11 DALFDA020000008.1 tpg gene 120074 120433 . + . ID=gene-O5C65_001479;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=O5C65_001479 DALFDA020000008.1 Protein Homology CDS 120074 120433 . + 0 ID=cds-HJH9171616.1;Parent=gene-O5C65_001479;Dbxref=NCBI_GP:HJH9171616.1;Name=HJH9171616.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681574.1;locus_tag=O5C65_001479;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=HJH9171616.1;transl_table=11 DALFDA020000008.1 tpg gene 120531 121352 . + . ID=gene-O5C65_001480;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=O5C65_001480 DALFDA020000008.1 Protein Homology CDS 120531 121352 . + 0 ID=cds-HJH9171617.1;Parent=gene-O5C65_001480;Dbxref=NCBI_GP:HJH9171617.1;Name=HJH9171617.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=O5C65_001480;product=undecaprenyl-diphosphate phosphatase;protein_id=HJH9171617.1;transl_table=11 DALFDA020000008.1 tpg gene 121457 122698 . - . ID=gene-O5C65_001481;Name=O5C65_001481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001481 DALFDA020000008.1 Protein Homology CDS 121457 122698 . - 0 ID=cds-HJH9171618.1;Parent=gene-O5C65_001481;Dbxref=NCBI_GP:HJH9171618.1;Name=HJH9171618.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462119.1;locus_tag=O5C65_001481;product=multifunctional CCA addition/repair protein;protein_id=HJH9171618.1;transl_table=11 DALFDA020000008.1 tpg gene 122761 123375 . - . ID=gene-O5C65_001482;Name=O5C65_001482;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001482 DALFDA020000008.1 Protein Homology CDS 122761 123375 . - 0 ID=cds-HJH9171619.1;Parent=gene-O5C65_001482;Dbxref=NCBI_GP:HJH9171619.1;Name=HJH9171619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462118.1;locus_tag=O5C65_001482;product=TIGR04211 family SH3 domain-containing protein;protein_id=HJH9171619.1;transl_table=11 DALFDA020000008.1 tpg gene 123617 124918 . + . ID=gene-O5C65_001483;Name=O5C65_001483;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001483 DALFDA020000008.1 Protein Homology CDS 123617 124918 . + 0 ID=cds-HJH9171620.1;Parent=gene-O5C65_001483;Dbxref=NCBI_GP:HJH9171620.1;Name=HJH9171620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462117.1;locus_tag=O5C65_001483;product=inorganic triphosphatase;protein_id=HJH9171620.1;transl_table=11 DALFDA020000008.1 tpg gene 125036 127879 . + . ID=gene-O5C65_001484;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=O5C65_001484 DALFDA020000008.1 Protein Homology CDS 125036 127879 . + 0 ID=cds-HJH9171621.1;Parent=gene-O5C65_001484;Dbxref=NCBI_GP:HJH9171621.1;Name=HJH9171621.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462116.1;locus_tag=O5C65_001484;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=HJH9171621.1;transl_table=11 DALFDA020000008.1 tpg gene 127927 129360 . + . ID=gene-O5C65_001485;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=O5C65_001485 DALFDA020000008.1 Protein Homology CDS 127927 129360 . + 0 ID=cds-HJH9171622.1;Parent=gene-O5C65_001485;Dbxref=NCBI_GP:HJH9171622.1;Name=HJH9171622.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462115.1;locus_tag=O5C65_001485;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=HJH9171622.1;transl_table=11 DALFDA020000008.1 tpg gene 129520 129579 . - . ID=gene-O5C65_001486;Name=O5C65_001486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001486 DALFDA020000008.1 Protein Homology CDS 129520 129579 . - 0 ID=cds-HJH9171623.1;Parent=gene-O5C65_001486;Dbxref=NCBI_GP:HJH9171623.1;Name=HJH9171623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=O5C65_001486;product=type I toxin-antitoxin system Ibs family toxin;protein_id=HJH9171623.1;transl_table=11 DALFDA020000008.1 tpg gene 129819 131498 . - . ID=gene-O5C65_001487;Name=O5C65_001487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001487 DALFDA020000008.1 Protein Homology CDS 129819 131498 . - 0 ID=cds-HJH9171624.1;Parent=gene-O5C65_001487;Dbxref=NCBI_GP:HJH9171624.1;Name=HJH9171624.1;Ontology_term=GO:0016020,GO:0016600;gbkey=CDS;go_component=membrane|0016020||IEA,flotillin complex|0016600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462114.1;locus_tag=O5C65_001487;product=flotillin family protein;protein_id=HJH9171624.1;transl_table=11 DALFDA020000008.1 tpg gene 131517 132137 . - . ID=gene-O5C65_001488;Name=O5C65_001488;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001488 DALFDA020000008.1 Protein Homology CDS 131517 132137 . - 0 ID=cds-HJH9171625.1;Parent=gene-O5C65_001488;Dbxref=NCBI_GP:HJH9171625.1;Name=HJH9171625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462113.1;locus_tag=O5C65_001488;product=OB-fold-containig protein;protein_id=HJH9171625.1;transl_table=11 DALFDA020000008.1 tpg gene 132395 132604 . + . ID=gene-O5C65_001489;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=O5C65_001489 DALFDA020000008.1 Protein Homology CDS 132395 132604 . + 0 ID=cds-HJH9171626.1;Parent=gene-O5C65_001489;Dbxref=NCBI_GP:HJH9171626.1;Name=HJH9171626.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462112.1;locus_tag=O5C65_001489;product=cell surface composition regulator GlgS;protein_id=HJH9171626.1;transl_table=11 DALFDA020000008.1 tpg gene 132679 132975 . - . ID=gene-O5C65_001490;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=O5C65_001490 DALFDA020000008.1 Protein Homology CDS 132679 132975 . - 0 ID=cds-HJH9171627.1;Parent=gene-O5C65_001490;Dbxref=NCBI_GP:HJH9171627.1;Name=HJH9171627.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566826.1;locus_tag=O5C65_001490;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=HJH9171627.1;transl_table=11 DALFDA020000008.1 cmsearch riboswitch 133108 133306 . + . ID=id-DALFDA020000008.1:133108..133306;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch DALFDA020000008.1 tpg gene 133412 134065 . + . ID=gene-O5C65_001491;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=O5C65_001491 DALFDA020000008.1 Protein Homology CDS 133412 134065 . + 0 ID=cds-HJH9171628.1;Parent=gene-O5C65_001491;Dbxref=NCBI_GP:HJH9171628.1;Name=HJH9171628.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462110.1;locus_tag=O5C65_001491;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=HJH9171628.1;transl_table=11 DALFDA020000008.1 tpg gene 134236 134913 . - . ID=gene-O5C65_001492;Name=dsbI;gbkey=Gene;gene=dsbI;gene_biotype=protein_coding;locus_tag=O5C65_001492 DALFDA020000008.1 Protein Homology CDS 134236 134913 . - 0 ID=cds-HJH9171629.1;Parent=gene-O5C65_001492;Dbxref=NCBI_GP:HJH9171629.1;Name=HJH9171629.1;gbkey=CDS;gene=dsbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462109.1;locus_tag=O5C65_001492;product=protein-disulfide oxidoreductase DsbI;protein_id=HJH9171629.1;transl_table=11 DALFDA020000008.1 tpg gene 134928 135599 . - . ID=gene-O5C65_001493;Name=O5C65_001493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001493 DALFDA020000008.1 Protein Homology CDS 134928 135599 . - 0 ID=cds-HJH9171630.1;Parent=gene-O5C65_001493;Dbxref=NCBI_GP:HJH9171630.1;Name=HJH9171630.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462108.1;locus_tag=O5C65_001493;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=HJH9171630.1;transl_table=11 DALFDA020000008.1 tpg gene 135619 137415 . - . ID=gene-O5C65_001494;Name=O5C65_001494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001494 DALFDA020000008.1 Protein Homology CDS 135619 137415 . - 0 ID=cds-HJH9171631.1;Parent=gene-O5C65_001494;Dbxref=NCBI_GP:HJH9171631.1;Name=HJH9171631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016159766.1;locus_tag=O5C65_001494;product=aryl-sulfate sulfotransferase;protein_id=HJH9171631.1;transl_table=11 DALFDA020000008.1 tpg gene 137815 137991 . + . ID=gene-O5C65_001495;Name=O5C65_001495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001495 DALFDA020000008.1 Protein Homology CDS 137815 137991 . + 0 ID=cds-HJH9171632.1;Parent=gene-O5C65_001495;Dbxref=NCBI_GP:HJH9171632.1;Name=HJH9171632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=O5C65_001495;product=hypothetical protein;protein_id=HJH9171632.1;transl_table=11 DALFDA020000008.1 tpg gene 138058 138831 . - . ID=gene-O5C65_001496;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=O5C65_001496 DALFDA020000008.1 Protein Homology CDS 138058 138831 . - 0 ID=cds-HJH9171633.1;Parent=gene-O5C65_001496;Dbxref=NCBI_GP:HJH9171633.1;Name=HJH9171633.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462105.1;locus_tag=O5C65_001496;product=zinc transporter ZupT;protein_id=HJH9171633.1;transl_table=11 DALFDA020000008.1 tpg gene 138972 139760 . + . ID=gene-O5C65_001497;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=O5C65_001497 DALFDA020000008.1 Protein Homology CDS 138972 139760 . + 0 ID=cds-HJH9171634.1;Parent=gene-O5C65_001497;Dbxref=NCBI_GP:HJH9171634.1;Name=HJH9171634.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=O5C65_001497;product=4%2C5-DOPA dioxygenase extradiol;protein_id=HJH9171634.1;transl_table=11 DALFDA020000008.1 tpg gene 139821 140984 . - . ID=gene-O5C65_001498;Name=O5C65_001498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001498 DALFDA020000008.1 Protein Homology CDS 139821 140984 . - 0 ID=cds-HJH9171635.1;Parent=gene-O5C65_001498;Dbxref=NCBI_GP:HJH9171635.1;Name=HJH9171635.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462103.1;locus_tag=O5C65_001498;product=glutathionylspermidine synthase family protein;protein_id=HJH9171635.1;transl_table=11 DALFDA020000008.1 tpg gene 140990 141661 . - . ID=gene-O5C65_001499;Name=O5C65_001499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001499 DALFDA020000008.1 Protein Homology CDS 140990 141661 . - 0 ID=cds-HJH9171636.1;Parent=gene-O5C65_001499;Dbxref=NCBI_GP:HJH9171636.1;Name=HJH9171636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462102.1;locus_tag=O5C65_001499;product=DUF1190 family protein;protein_id=HJH9171636.1;transl_table=11 DALFDA020000008.1 tpg gene 141874 143349 . - . ID=gene-O5C65_001500;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=O5C65_001500 DALFDA020000008.1 Protein Homology CDS 141874 143349 . - 0 ID=cds-HJH9171637.1;Parent=gene-O5C65_001500;Dbxref=NCBI_GP:HJH9171637.1;Name=HJH9171637.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462101.3;locus_tag=O5C65_001500;product=outer membrane channel protein TolC;protein_id=HJH9171637.1;transl_table=11 DALFDA020000008.1 tpg gene 143550 144182 . + . ID=gene-O5C65_001501;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=O5C65_001501 DALFDA020000008.1 Protein Homology CDS 143550 144182 . + 0 ID=cds-HJH9171638.1;Parent=gene-O5C65_001501;Dbxref=NCBI_GP:HJH9171638.1;Name=HJH9171638.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462100.1;locus_tag=O5C65_001501;product=ADP-ribose diphosphatase;protein_id=HJH9171638.1;transl_table=11 DALFDA020000008.1 tpg gene 144179 144601 . + . ID=gene-O5C65_001502;Name=O5C65_001502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001502 DALFDA020000008.1 Protein Homology CDS 144179 144601 . + 0 ID=cds-HJH9171639.1;Parent=gene-O5C65_001502;Dbxref=NCBI_GP:HJH9171639.1;Name=HJH9171639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462099.1;locus_tag=O5C65_001502;product=DUF1249 family protein;protein_id=HJH9171639.1;transl_table=11 DALFDA020000008.1 tpg gene 144626 145453 . + . ID=gene-O5C65_001503;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=O5C65_001503 DALFDA020000008.1 Protein Homology CDS 144626 145453 . + 0 ID=cds-HJH9171640.1;Parent=gene-O5C65_001503;Dbxref=NCBI_GP:HJH9171640.1;Name=HJH9171640.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462098.1;locus_tag=O5C65_001503;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=HJH9171640.1;transl_table=11 DALFDA020000008.1 tpg gene 145453 146034 . + . ID=gene-O5C65_001504;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=O5C65_001504 DALFDA020000008.1 Protein Homology CDS 145453 146034 . + 0 ID=cds-HJH9171641.1;Parent=gene-O5C65_001504;Dbxref=NCBI_GP:HJH9171641.1;Name=HJH9171641.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462097.1;locus_tag=O5C65_001504;product=esterase YqiA;protein_id=HJH9171641.1;transl_table=11 DALFDA020000008.1 tpg gene 146062 147954 . + . ID=gene-O5C65_001505;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=O5C65_001505 DALFDA020000008.1 Protein Homology CDS 146062 147954 . + 0 ID=cds-HJH9171642.1;Parent=gene-O5C65_001505;Dbxref=NCBI_GP:HJH9171642.1;Name=HJH9171642.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462096.1;locus_tag=O5C65_001505;product=DNA topoisomerase IV subunit B;protein_id=HJH9171642.1;transl_table=11 DALFDA020000008.1 tpg gene 148079 148393 . - . ID=gene-O5C65_001506;Name=O5C65_001506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001506 DALFDA020000008.1 Protein Homology CDS 148079 148393 . - 0 ID=cds-HJH9171643.1;Parent=gene-O5C65_001506;Dbxref=NCBI_GP:HJH9171643.1;Name=HJH9171643.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462095.1;locus_tag=O5C65_001506;product=putative quinol monooxygenase;protein_id=HJH9171643.1;transl_table=11 DALFDA020000008.1 tpg gene 148425 149006 . - . ID=gene-O5C65_001507;Name=O5C65_001507;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001507 DALFDA020000008.1 Protein Homology CDS 148425 149006 . - 0 ID=cds-HJH9171644.1;Parent=gene-O5C65_001507;Dbxref=NCBI_GP:HJH9171644.1;Name=HJH9171644.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462094.1;locus_tag=O5C65_001507;product=NAD(P)H-dependent oxidoreductase;protein_id=HJH9171644.1;transl_table=11 DALFDA020000008.1 tpg gene 149113 150462 . - . ID=gene-O5C65_001508;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=O5C65_001508 DALFDA020000008.1 Protein Homology CDS 149113 150462 . - 0 ID=cds-HJH9171645.1;Parent=gene-O5C65_001508;Dbxref=NCBI_GP:HJH9171645.1;Name=HJH9171645.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462093.1;locus_tag=O5C65_001508;product=quorum sensing histidine kinase QseC;protein_id=HJH9171645.1;transl_table=11 DALFDA020000008.1 tpg gene 150459 151118 . - . ID=gene-O5C65_001509;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=O5C65_001509 DALFDA020000008.1 Protein Homology CDS 150459 151118 . - 0 ID=cds-HJH9171646.1;Parent=gene-O5C65_001509;Dbxref=NCBI_GP:HJH9171646.1;Name=HJH9171646.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462092.1;locus_tag=O5C65_001509;product=quorum sensing response regulator transcription factor QseB;protein_id=HJH9171646.1;transl_table=11 DALFDA020000008.1 tpg gene 151270 151662 . + . ID=gene-O5C65_001510;Name=O5C65_001510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001510 DALFDA020000008.1 Protein Homology CDS 151270 151662 . + 0 ID=cds-HJH9171647.1;Parent=gene-O5C65_001510;Dbxref=NCBI_GP:HJH9171647.1;Name=HJH9171647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462091.1;locus_tag=O5C65_001510;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=HJH9171647.1;transl_table=11 DALFDA020000008.1 tpg gene 151734 152600 . + . ID=gene-O5C65_001511;Name=O5C65_001511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001511 DALFDA020000008.1 Protein Homology CDS 151734 152600 . + 0 ID=cds-HJH9171648.1;Parent=gene-O5C65_001511;Dbxref=NCBI_GP:HJH9171648.1;Name=HJH9171648.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462090.1;locus_tag=O5C65_001511;product=AraC family transcriptional regulator;protein_id=HJH9171648.1;transl_table=11 DALFDA020000008.1 tpg gene 152711 154969 . + . ID=gene-O5C65_001512;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=O5C65_001512 DALFDA020000008.1 Protein Homology CDS 152711 154969 . + 0 ID=cds-HJH9171649.1;Parent=gene-O5C65_001512;Dbxref=NCBI_GP:HJH9171649.1;Name=HJH9171649.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462089.1;locus_tag=O5C65_001512;product=DNA topoisomerase IV subunit A;protein_id=HJH9171649.1;transl_table=11 DALFDA020000008.1 tpg gene 155226 155963 . + . ID=gene-O5C65_001513;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=O5C65_001513 DALFDA020000008.1 Protein Homology CDS 155226 155963 . + 0 ID=cds-HJH9171650.1;Parent=gene-O5C65_001513;Dbxref=NCBI_GP:HJH9171650.1;Name=HJH9171650.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462088.1;locus_tag=O5C65_001513;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=HJH9171650.1;transl_table=11 DALFDA020000008.1 tpg gene 156037 157449 . + . ID=gene-O5C65_001514;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=O5C65_001514 DALFDA020000008.1 Protein Homology CDS 156037 157449 . + 0 ID=cds-HJH9171651.1;Parent=gene-O5C65_001514;Dbxref=NCBI_GP:HJH9171651.1;Name=HJH9171651.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462087.1;locus_tag=O5C65_001514;product=cell division protein FtsP;protein_id=HJH9171651.1;transl_table=11 DALFDA020000008.1 tpg gene 157470 158390 . + . ID=gene-O5C65_001515;Name=O5C65_001515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001515 DALFDA020000008.1 Protein Homology CDS 157470 158390 . + 0 ID=cds-HJH9171652.1;Parent=gene-O5C65_001515;Dbxref=NCBI_GP:HJH9171652.1;Name=HJH9171652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001222782.1;locus_tag=O5C65_001515;product=hypothetical protein;protein_id=HJH9171652.1;transl_table=11 DALFDA020000008.1 tpg gene 159080 159985 . + . ID=gene-O5C65_001516;Name=O5C65_001516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001516 DALFDA020000008.1 Protein Homology CDS 159080 159985 . + 0 ID=cds-HJH9171653.1;Parent=gene-O5C65_001516;Dbxref=NCBI_GP:HJH9171653.1;Name=HJH9171653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001269658.1;locus_tag=O5C65_001516;product=hypothetical protein;protein_id=HJH9171653.1;transl_table=11 DALFDA020000008.1 tpg gene 160001 161425 . + . ID=gene-O5C65_001517;Name=O5C65_001517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001517 DALFDA020000008.1 Protein Homology CDS 160001 161425 . + 0 ID=cds-HJH9171654.1;Parent=gene-O5C65_001517;Dbxref=NCBI_GP:HJH9171654.1;Name=HJH9171654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000384560.1;locus_tag=O5C65_001517;product=hypothetical protein;protein_id=HJH9171654.1;transl_table=11 DALFDA020000008.1 tpg gene 161495 162916 . + . ID=gene-O5C65_001518;Name=O5C65_001518;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001518 DALFDA020000008.1 Protein Homology CDS 161495 162916 . + 0 ID=cds-HJH9171655.1;Parent=gene-O5C65_001518;Dbxref=NCBI_GP:HJH9171655.1;Name=HJH9171655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528005.1;locus_tag=O5C65_001518;product=DUF4459 domain-containing protein;protein_id=HJH9171655.1;transl_table=11 DALFDA020000008.1 tpg gene 163051 165222 . + . ID=gene-O5C65_001519;Name=O5C65_001519;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001519 DALFDA020000008.1 Protein Homology CDS 163051 165222 . + 0 ID=cds-HJH9171656.1;Parent=gene-O5C65_001519;Dbxref=NCBI_GP:HJH9171656.1;Name=HJH9171656.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462083.1;locus_tag=O5C65_001519;product=YgiQ family radical SAM protein;protein_id=HJH9171656.1;transl_table=11 DALFDA020000008.1 tpg gene 165425 165619 . + . ID=gene-O5C65_001520;Name=O5C65_001520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001520 DALFDA020000008.1 GeneMarkS-2+ CDS 165425 165619 . + 0 ID=cds-HJH9171657.1;Parent=gene-O5C65_001520;Dbxref=NCBI_GP:HJH9171657.1;Name=HJH9171657.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_001520;product=hypothetical protein;protein_id=HJH9171657.1;transl_table=11 DALFDA020000008.1 tpg gene 165777 166232 . - . ID=gene-O5C65_001521;Name=O5C65_001521;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001521 DALFDA020000008.1 Protein Homology CDS 165777 166232 . - 0 ID=cds-HJH9171658.1;Parent=gene-O5C65_001521;Dbxref=NCBI_GP:HJH9171658.1;Name=HJH9171658.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462082.1;locus_tag=O5C65_001521;product=HIT family protein;protein_id=HJH9171658.1;transl_table=11 DALFDA020000008.1 tpg pseudogene 166277 167762 . - . ID=gene-O5C65_001522;Name=O5C65_001522;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_001522;pseudo=true DALFDA020000008.1 Protein Homology CDS 166277 167762 . - 0 ID=cds-O5C65_001522;Parent=gene-O5C65_001522;Note=frameshifted;Ontology_term=GO:0006820,GO:0008509,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462081.3;locus_tag=O5C65_001522;product=DASS family sodium-coupled anion symporter;pseudo=true;transl_table=11 DALFDA020000008.1 tpg gene 167928 168755 . - . ID=gene-O5C65_001523;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=O5C65_001523 DALFDA020000008.1 Protein Homology CDS 167928 168755 . - 0 ID=cds-HJH9171659.1;Parent=gene-O5C65_001523;Dbxref=NCBI_GP:HJH9171659.1;Name=HJH9171659.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462080.1;locus_tag=O5C65_001523;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=HJH9171659.1;transl_table=11 DALFDA020000008.1 tpg gene 168861 170024 . - . ID=gene-O5C65_001524;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=O5C65_001524 DALFDA020000008.1 Protein Homology CDS 168861 170024 . - 0 ID=cds-HJH9171660.1;Parent=gene-O5C65_001524;Dbxref=NCBI_GP:HJH9171660.1;Name=HJH9171660.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase (NAD+) activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462079.1;locus_tag=O5C65_001524;product=alcohol dehydrogenase;protein_id=HJH9171660.1;transl_table=11 DALFDA020000008.1 tpg gene 170217 171116 . + . ID=gene-O5C65_001525;Name=O5C65_001525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001525 DALFDA020000008.1 Protein Homology CDS 170217 171116 . + 0 ID=cds-HJH9171661.1;Parent=gene-O5C65_001525;Dbxref=NCBI_GP:HJH9171661.1;Name=HJH9171661.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=O5C65_001525;product=AraC family transcriptional regulator;protein_id=HJH9171661.1;transl_table=11 DALFDA020000008.1 tpg gene 171180 171839 . - . ID=gene-O5C65_001526;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=O5C65_001526 DALFDA020000008.1 Protein Homology CDS 171180 171839 . - 0 ID=cds-HJH9171662.1;Parent=gene-O5C65_001526;Dbxref=NCBI_GP:HJH9171662.1;Name=HJH9171662.1;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462077.1;locus_tag=O5C65_001526;product=DedA family general envelope maintenance protein YghB;protein_id=HJH9171662.1;transl_table=11 DALFDA020000008.1 tpg gene 171979 173166 . - . ID=gene-O5C65_001527;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=O5C65_001527 DALFDA020000008.1 Protein Homology CDS 171979 173166 . - 0 ID=cds-HJH9171663.1;Parent=gene-O5C65_001527;Dbxref=NCBI_GP:HJH9171663.1;Name=HJH9171663.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462076.1;locus_tag=O5C65_001527;product=cystathionine beta-lyase;protein_id=HJH9171663.1;transl_table=11 DALFDA020000008.1 tpg gene 173418 174152 . + . ID=gene-O5C65_001528;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=O5C65_001528 DALFDA020000008.1 Protein Homology CDS 173418 174152 . + 0 ID=cds-HJH9171664.1;Parent=gene-O5C65_001528;Dbxref=NCBI_GP:HJH9171664.1;Name=HJH9171664.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462074.1;locus_tag=O5C65_001528;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=HJH9171664.1;transl_table=11 DALFDA020000008.1 tpg gene 174159 174584 . + . ID=gene-O5C65_001529;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=O5C65_001529 DALFDA020000008.1 Protein Homology CDS 174159 174584 . + 0 ID=cds-HJH9171665.1;Parent=gene-O5C65_001529;Dbxref=NCBI_GP:HJH9171665.1;Name=HJH9171665.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462073.1;locus_tag=O5C65_001529;product=TonB system transport protein ExbD;protein_id=HJH9171665.1;transl_table=11 DALFDA020000008.1 tpg gene 174697 175581 . - . ID=gene-O5C65_001530;Name=O5C65_001530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001530 DALFDA020000008.1 Protein Homology CDS 174697 175581 . - 0 ID=cds-HJH9171666.1;Parent=gene-O5C65_001530;Dbxref=NCBI_GP:HJH9171666.1;Name=HJH9171666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462072.1;locus_tag=O5C65_001530;product=SDR family oxidoreductase;protein_id=HJH9171666.1;transl_table=11 DALFDA020000008.1 tpg gene 175705 176109 . - . ID=gene-O5C65_001531;Name=O5C65_001531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001531 DALFDA020000008.1 Protein Homology CDS 175705 176109 . - 0 ID=cds-HJH9171667.1;Parent=gene-O5C65_001531;Dbxref=NCBI_GP:HJH9171667.1;Name=HJH9171667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462071.1;locus_tag=O5C65_001531;product=cytoplasmic protein;protein_id=HJH9171667.1;transl_table=11 DALFDA020000008.1 tpg gene 176096 176506 . - . ID=gene-O5C65_001532;Name=O5C65_001532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001532 DALFDA020000008.1 Protein Homology CDS 176096 176506 . - 0 ID=cds-HJH9171668.1;Parent=gene-O5C65_001532;Dbxref=NCBI_GP:HJH9171668.1;Name=HJH9171668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462070.1;locus_tag=O5C65_001532;product=hypothetical protein;protein_id=HJH9171668.1;transl_table=11 DALFDA020000008.1 tpg gene 176609 177109 . + . ID=gene-O5C65_001533;Name=O5C65_001533;end_range=177109,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001533;partial=true DALFDA020000008.1 Protein Homology CDS 176609 177109 . + 0 ID=cds-HJH9171669.1;Parent=gene-O5C65_001533;Dbxref=NCBI_GP:HJH9171669.1;Name=HJH9171669.1;end_range=177109,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441059.1;locus_tag=O5C65_001533;partial=true;product=ESA_00282 family adhesion-associated protein;protein_id=HJH9171669.1;transl_table=11 ##sequence-region DALFDA020000009.1 1 175128 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000009.1 tpg region 1 175128 . + . ID=DALFDA020000009.1:1..175128;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000009.1 tpg gene 143 258 . + . ID=gene-O5C65_001534;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=O5C65_001534 DALFDA020000009.1 cmsearch rRNA 143 258 . + . ID=rna-O5C65_001534;Parent=gene-O5C65_001534;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_001534;product=5S ribosomal RNA DALFDA020000009.1 cmsearch exon 143 258 . + . ID=exon-O5C65_001534-1;Parent=rna-O5C65_001534;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_001534;product=5S ribosomal RNA DALFDA020000009.1 tpg gene 683 1138 . + . ID=gene-O5C65_001535;Name=O5C65_001535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001535 DALFDA020000009.1 Protein Homology CDS 683 1138 . + 0 ID=cds-HJH9171670.1;Parent=gene-O5C65_001535;Dbxref=NCBI_GP:HJH9171670.1;Name=HJH9171670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461590.1;locus_tag=O5C65_001535;product=DUF4385 domain-containing protein;protein_id=HJH9171670.1;transl_table=11 DALFDA020000009.1 tpg gene 1242 2543 . + . ID=gene-O5C65_001536;Name=O5C65_001536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001536 DALFDA020000009.1 Protein Homology CDS 1242 2543 . + 0 ID=cds-HJH9171671.1;Parent=gene-O5C65_001536;Dbxref=NCBI_GP:HJH9171671.1;Name=HJH9171671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461589.1;locus_tag=O5C65_001536;product=MFS transporter;protein_id=HJH9171671.1;transl_table=11 DALFDA020000009.1 tpg gene 2540 2863 . - . ID=gene-O5C65_001537;Name=O5C65_001537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001537 DALFDA020000009.1 Protein Homology CDS 2540 2863 . - 0 ID=cds-HJH9171672.1;Parent=gene-O5C65_001537;Dbxref=NCBI_GP:HJH9171672.1;Name=HJH9171672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461588.1;locus_tag=O5C65_001537;product=YfiM family lipoprotein;protein_id=HJH9171672.1;transl_table=11 DALFDA020000009.1 tpg gene 2908 4263 . - . ID=gene-O5C65_001538;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=O5C65_001538 DALFDA020000009.1 Protein Homology CDS 2908 4263 . - 0 ID=cds-HJH9171673.1;Parent=gene-O5C65_001538;Dbxref=NCBI_GP:HJH9171673.1;Name=HJH9171673.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=O5C65_001538;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=HJH9171673.1;transl_table=11 DALFDA020000009.1 tpg gene 4378 7038 . - . ID=gene-O5C65_001539;Name=pat;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=O5C65_001539 DALFDA020000009.1 Protein Homology CDS 4378 7038 . - 0 ID=cds-HJH9171674.1;Parent=gene-O5C65_001539;Dbxref=NCBI_GP:HJH9171674.1;Name=HJH9171674.1;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461586.1;locus_tag=O5C65_001539;product=protein lysine acetyltransferase;protein_id=HJH9171674.1;transl_table=11 DALFDA020000009.1 tpg gene 7092 7772 . - . ID=gene-O5C65_001540;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=O5C65_001540 DALFDA020000009.1 Protein Homology CDS 7092 7772 . - 0 ID=cds-HJH9171675.1;Parent=gene-O5C65_001540;Dbxref=NCBI_GP:HJH9171675.1;Name=HJH9171675.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461585.1;locus_tag=O5C65_001540;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=HJH9171675.1;transl_table=11 DALFDA020000009.1 tpg gene 7845 8264 . - . ID=gene-O5C65_001541;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=O5C65_001541 DALFDA020000009.1 Protein Homology CDS 7845 8264 . - 0 ID=cds-HJH9171676.1;Parent=gene-O5C65_001541;Dbxref=NCBI_GP:HJH9171676.1;Name=HJH9171676.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461584.1;locus_tag=O5C65_001541;product=thioredoxin TrxC;protein_id=HJH9171676.1;transl_table=11 DALFDA020000009.1 tpg gene 8468 9505 . + . ID=gene-O5C65_001542;Name=O5C65_001542;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001542 DALFDA020000009.1 Protein Homology CDS 8468 9505 . + 0 ID=cds-HJH9171677.1;Parent=gene-O5C65_001542;Dbxref=NCBI_GP:HJH9171677.1;Name=HJH9171677.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461583.1;locus_tag=O5C65_001542;product=tRNA/rRNA methyltransferase;protein_id=HJH9171677.1;transl_table=11 DALFDA020000009.1 tpg gene 9621 10310 . - . ID=gene-O5C65_001543;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=O5C65_001543 DALFDA020000009.1 Protein Homology CDS 9621 10310 . - 0 ID=cds-HJH9171678.1;Parent=gene-O5C65_001543;Dbxref=NCBI_GP:HJH9171678.1;Name=HJH9171678.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461582.1;locus_tag=O5C65_001543;product=uracil-DNA glycosylase;protein_id=HJH9171678.1;transl_table=11 DALFDA020000009.1 tpg gene 10629 11012 . + . ID=gene-O5C65_001544;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=O5C65_001544 DALFDA020000009.1 Protein Homology CDS 10629 11012 . + 0 ID=cds-HJH9171679.1;Parent=gene-O5C65_001544;Dbxref=NCBI_GP:HJH9171679.1;Name=HJH9171679.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=O5C65_001544;product=autonomous glycyl radical cofactor GrcA;protein_id=HJH9171679.1;transl_table=11 DALFDA020000009.1 tpg gene 11074 11661 . - . ID=gene-O5C65_001545;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=O5C65_001545 DALFDA020000009.1 Protein Homology CDS 11074 11661 . - 0 ID=cds-HJH9171680.1;Parent=gene-O5C65_001545;Dbxref=NCBI_GP:HJH9171680.1;Name=HJH9171680.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461580.1;locus_tag=O5C65_001545;product=cysteine/O-acetylserine transporter;protein_id=HJH9171680.1;transl_table=11 DALFDA020000009.1 tpg gene 11764 12663 . + . ID=gene-O5C65_001546;Name=O5C65_001546;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001546 DALFDA020000009.1 Protein Homology CDS 11764 12663 . + 0 ID=cds-HJH9171681.1;Parent=gene-O5C65_001546;Dbxref=NCBI_GP:HJH9171681.1;Name=HJH9171681.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461579.1;locus_tag=O5C65_001546;product=LysR family transcriptional regulator;protein_id=HJH9171681.1;transl_table=11 DALFDA020000009.1 tpg gene 12681 14015 . - . ID=gene-O5C65_001547;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=O5C65_001547 DALFDA020000009.1 Protein Homology CDS 12681 14015 . - 0 ID=cds-HJH9171682.1;Parent=gene-O5C65_001547;Dbxref=NCBI_GP:HJH9171682.1;Name=HJH9171682.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461578.1;locus_tag=O5C65_001547;product=ATP-dependent RNA helicase SrmB;protein_id=HJH9171682.1;transl_table=11 DALFDA020000009.1 tpg gene 14146 14883 . + . ID=gene-O5C65_001548;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=O5C65_001548 DALFDA020000009.1 Protein Homology CDS 14146 14883 . + 0 ID=cds-HJH9171683.1;Parent=gene-O5C65_001548;Dbxref=NCBI_GP:HJH9171683.1;Name=HJH9171683.1;Ontology_term=GO:0030488,GO:0003676,GO:0016430;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461577.1;locus_tag=O5C65_001548;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=HJH9171683.1;transl_table=11 DALFDA020000009.1 tpg gene 14868 16490 . - . ID=gene-O5C65_001549;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=O5C65_001549 DALFDA020000009.1 Protein Homology CDS 14868 16490 . - 0 ID=cds-HJH9171684.1;Parent=gene-O5C65_001549;Dbxref=NCBI_GP:HJH9171684.1;Name=HJH9171684.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461576.1;locus_tag=O5C65_001549;product=L-aspartate oxidase;protein_id=HJH9171684.1;transl_table=11 DALFDA020000009.1 tpg gene 16754 16918 . + . ID=gene-O5C65_001550;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=O5C65_001550 DALFDA020000009.1 Protein Homology CDS 16754 16918 . + 0 ID=cds-HJH9171685.1;Parent=gene-O5C65_001550;Dbxref=NCBI_GP:HJH9171685.1;Name=HJH9171685.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344135.1;locus_tag=O5C65_001550;product=rpoE leader peptide RseD;protein_id=HJH9171685.1;transl_table=11 DALFDA020000009.1 tpg gene 16915 17490 . + . ID=gene-O5C65_001551;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=O5C65_001551 DALFDA020000009.1 Protein Homology CDS 16915 17490 . + 0 ID=cds-HJH9171686.1;Parent=gene-O5C65_001551;Dbxref=NCBI_GP:HJH9171686.1;Name=HJH9171686.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=O5C65_001551;product=RNA polymerase sigma factor RpoE;protein_id=HJH9171686.1;transl_table=11 DALFDA020000009.1 tpg gene 17522 18172 . + . ID=gene-O5C65_001552;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=O5C65_001552 DALFDA020000009.1 Protein Homology CDS 17522 18172 . + 0 ID=cds-HJH9171687.1;Parent=gene-O5C65_001552;Dbxref=NCBI_GP:HJH9171687.1;Name=HJH9171687.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461574.1;locus_tag=O5C65_001552;product=anti-sigma-E factor RseA;protein_id=HJH9171687.1;transl_table=11 DALFDA020000009.1 tpg gene 18172 19128 . + . ID=gene-O5C65_001553;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=O5C65_001553 DALFDA020000009.1 Protein Homology CDS 18172 19128 . + 0 ID=cds-HJH9171688.1;Parent=gene-O5C65_001553;Dbxref=NCBI_GP:HJH9171688.1;Name=HJH9171688.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461573.1;locus_tag=O5C65_001553;product=sigma-E factor regulatory protein RseB;protein_id=HJH9171688.1;transl_table=11 DALFDA020000009.1 tpg gene 19125 19604 . + . ID=gene-O5C65_001554;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=O5C65_001554 DALFDA020000009.1 Protein Homology CDS 19125 19604 . + 0 ID=cds-HJH9171689.1;Parent=gene-O5C65_001554;Dbxref=NCBI_GP:HJH9171689.1;Name=HJH9171689.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461572.1;locus_tag=O5C65_001554;product=SoxR-reducing system protein RseC;protein_id=HJH9171689.1;transl_table=11 DALFDA020000009.1 tpg gene 19856 21655 . + . ID=gene-O5C65_001555;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=O5C65_001555 DALFDA020000009.1 Protein Homology CDS 19856 21655 . + 0 ID=cds-HJH9171690.1;Parent=gene-O5C65_001555;Dbxref=NCBI_GP:HJH9171690.1;Name=HJH9171690.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461518.1;locus_tag=O5C65_001555;product=translation elongation factor 4;protein_id=HJH9171690.1;transl_table=11 DALFDA020000009.1 tpg gene 21672 22646 . + . ID=gene-O5C65_001556;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=O5C65_001556 DALFDA020000009.1 Protein Homology CDS 21672 22646 . + 0 ID=cds-HJH9171691.1;Parent=gene-O5C65_001556;Dbxref=NCBI_GP:HJH9171691.1;Name=HJH9171691.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461517.1;locus_tag=O5C65_001556;product=signal peptidase I;protein_id=HJH9171691.1;transl_table=11 DALFDA020000009.1 tpg gene 22920 23600 . + . ID=gene-O5C65_001557;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=O5C65_001557 DALFDA020000009.1 Protein Homology CDS 22920 23600 . + 0 ID=cds-HJH9171692.1;Parent=gene-O5C65_001557;Dbxref=NCBI_GP:HJH9171692.1;Name=HJH9171692.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=O5C65_001557;product=ribonuclease III;protein_id=HJH9171692.1;transl_table=11 DALFDA020000009.1 tpg gene 23597 24502 . + . ID=gene-O5C65_001558;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=O5C65_001558 DALFDA020000009.1 Protein Homology CDS 23597 24502 . + 0 ID=cds-HJH9171693.1;Parent=gene-O5C65_001558;Dbxref=NCBI_GP:HJH9171693.1;Name=HJH9171693.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461515.1;locus_tag=O5C65_001558;product=GTPase Era;protein_id=HJH9171693.1;transl_table=11 DALFDA020000009.1 tpg gene 24514 25242 . + . ID=gene-O5C65_001559;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=O5C65_001559 DALFDA020000009.1 Protein Homology CDS 24514 25242 . + 0 ID=cds-HJH9171694.1;Parent=gene-O5C65_001559;Dbxref=NCBI_GP:HJH9171694.1;Name=HJH9171694.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461514.1;locus_tag=O5C65_001559;product=DNA repair protein RecO;protein_id=HJH9171694.1;transl_table=11 DALFDA020000009.1 tpg gene 25254 25985 . + . ID=gene-O5C65_001560;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=O5C65_001560 DALFDA020000009.1 Protein Homology CDS 25254 25985 . + 0 ID=cds-HJH9171695.1;Parent=gene-O5C65_001560;Dbxref=NCBI_GP:HJH9171695.1;Name=HJH9171695.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461513.1;locus_tag=O5C65_001560;product=pyridoxine 5'-phosphate synthase;protein_id=HJH9171695.1;transl_table=11 DALFDA020000009.1 tpg gene 25985 26365 . + . ID=gene-O5C65_001561;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=O5C65_001561 DALFDA020000009.1 Protein Homology CDS 25985 26365 . + 0 ID=cds-HJH9171696.1;Parent=gene-O5C65_001561;Dbxref=NCBI_GP:HJH9171696.1;Name=HJH9171696.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461512.1;locus_tag=O5C65_001561;product=holo-ACP synthase;protein_id=HJH9171696.1;transl_table=11 DALFDA020000009.1 tpg gene 26477 26737 . - . ID=gene-O5C65_001562;Name=O5C65_001562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001562 DALFDA020000009.1 Protein Homology CDS 26477 26737 . - 0 ID=cds-HJH9171697.1;Parent=gene-O5C65_001562;Dbxref=NCBI_GP:HJH9171697.1;Name=HJH9171697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461511.1;locus_tag=O5C65_001562;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=HJH9171697.1;transl_table=11 DALFDA020000009.1 tpg gene 26790 27701 . - . ID=gene-O5C65_001563;Name=O5C65_001563;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001563 DALFDA020000009.1 Protein Homology CDS 26790 27701 . - 0 ID=cds-HJH9171698.1;Parent=gene-O5C65_001563;Dbxref=NCBI_GP:HJH9171698.1;Name=HJH9171698.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001581956.1;locus_tag=O5C65_001563;product=LysR family transcriptional regulator;protein_id=HJH9171698.1;transl_table=11 DALFDA020000009.1 tpg gene 27817 29013 . + . ID=gene-O5C65_001564;Name=O5C65_001564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001564 DALFDA020000009.1 Protein Homology CDS 27817 29013 . + 0 ID=cds-HJH9171699.1;Parent=gene-O5C65_001564;Dbxref=NCBI_GP:HJH9171699.1;Name=HJH9171699.1;Ontology_term=GO:0015129;gbkey=CDS;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461509.1;locus_tag=O5C65_001564;product=L-lactate MFS transporter;protein_id=HJH9171699.1;transl_table=11 DALFDA020000009.1 tpg gene 29035 29952 . + . ID=gene-O5C65_001565;Name=O5C65_001565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001565 DALFDA020000009.1 Protein Homology CDS 29035 29952 . + 0 ID=cds-HJH9171700.1;Parent=gene-O5C65_001565;Dbxref=NCBI_GP:HJH9171700.1;Name=HJH9171700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461508.1;locus_tag=O5C65_001565;product=oxidoreductase;protein_id=HJH9171700.1;transl_table=11 DALFDA020000009.1 tpg gene 29991 30839 . - . ID=gene-O5C65_001566;Name=O5C65_001566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001566 DALFDA020000009.1 Protein Homology CDS 29991 30839 . - 0 ID=cds-HJH9171701.1;Parent=gene-O5C65_001566;Dbxref=NCBI_GP:HJH9171701.1;Name=HJH9171701.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461507.1;locus_tag=O5C65_001566;product=MurR/RpiR family transcriptional regulator;protein_id=HJH9171701.1;transl_table=11 DALFDA020000009.1 tpg gene 30955 31848 . + . ID=gene-O5C65_001567;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=O5C65_001567 DALFDA020000009.1 Protein Homology CDS 30955 31848 . + 0 ID=cds-HJH9171702.1;Parent=gene-O5C65_001567;Dbxref=NCBI_GP:HJH9171702.1;Name=HJH9171702.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461506.1;locus_tag=O5C65_001567;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=HJH9171702.1;transl_table=11 DALFDA020000009.1 tpg gene 31859 33220 . + . ID=gene-O5C65_001568;Name=O5C65_001568;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001568 DALFDA020000009.1 Protein Homology CDS 31859 33220 . + 0 ID=cds-HJH9171703.1;Parent=gene-O5C65_001568;Dbxref=NCBI_GP:HJH9171703.1;Name=HJH9171703.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461505.1;locus_tag=O5C65_001568;product=PTS transporter subunit EIIC;protein_id=HJH9171703.1;transl_table=11 DALFDA020000009.1 tpg gene 33224 33859 . + . ID=gene-O5C65_001569;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=O5C65_001569 DALFDA020000009.1 Protein Homology CDS 33224 33859 . + 0 ID=cds-HJH9171704.1;Parent=gene-O5C65_001569;Dbxref=NCBI_GP:HJH9171704.1;Name=HJH9171704.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461504.1;locus_tag=O5C65_001569;product=phosphatidylglycerophosphatase C;protein_id=HJH9171704.1;transl_table=11 DALFDA020000009.1 tpg gene 33884 34435 . + . ID=gene-O5C65_001570;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=O5C65_001570 DALFDA020000009.1 Protein Homology CDS 33884 34435 . + 0 ID=cds-HJH9171705.1;Parent=gene-O5C65_001570;Dbxref=NCBI_GP:HJH9171705.1;Name=HJH9171705.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461503.1;locus_tag=O5C65_001570;product=tRNA adenosine(34) deaminase TadA;protein_id=HJH9171705.1;transl_table=11 DALFDA020000009.1 tpg gene 34486 36030 . - . ID=gene-O5C65_001571;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=O5C65_001571 DALFDA020000009.1 Protein Homology CDS 34486 36030 . - 0 ID=cds-HJH9171706.1;Parent=gene-O5C65_001571;Dbxref=NCBI_GP:HJH9171706.1;Name=HJH9171706.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461502.1;locus_tag=O5C65_001571;product=membrane-bound lytic murein transglycosylase MltF;protein_id=HJH9171706.1;transl_table=11 DALFDA020000009.1 tpg gene 36031 36264 . - . ID=gene-O5C65_001572;Name=O5C65_001572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001572 DALFDA020000009.1 Protein Homology CDS 36031 36264 . - 0 ID=cds-HJH9171707.1;Parent=gene-O5C65_001572;Dbxref=NCBI_GP:HJH9171707.1;Name=HJH9171707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461501.1;locus_tag=O5C65_001572;product=hypothetical protein;protein_id=HJH9171707.1;transl_table=11 DALFDA020000009.1 tpg gene 36286 40173 . + . ID=gene-O5C65_001573;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=O5C65_001573 DALFDA020000009.1 Protein Homology CDS 36286 40173 . + 0 ID=cds-HJH9171708.1;Parent=gene-O5C65_001573;Dbxref=NCBI_GP:HJH9171708.1;Name=HJH9171708.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461500.1;locus_tag=O5C65_001573;product=phosphoribosylformylglycinamidine synthase;protein_id=HJH9171708.1;transl_table=11 DALFDA020000009.1 tpg gene 40823 42253 . + . ID=gene-O5C65_001574;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=O5C65_001574 DALFDA020000009.1 Protein Homology CDS 40823 42253 . + 0 ID=cds-HJH9171709.1;Parent=gene-O5C65_001574;Dbxref=NCBI_GP:HJH9171709.1;Name=HJH9171709.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001676035.1;locus_tag=O5C65_001574;product=two component system sensor histidine kinase QseE/GlrK;protein_id=HJH9171709.1;transl_table=11 DALFDA020000009.1 tpg gene 42255 43019 . + . ID=gene-O5C65_001575;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=O5C65_001575 DALFDA020000009.1 Protein Homology CDS 42255 43019 . + 0 ID=cds-HJH9171710.1;Parent=gene-O5C65_001575;Dbxref=NCBI_GP:HJH9171710.1;Name=HJH9171710.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461498.1;locus_tag=O5C65_001575;product=two-component system QseEF-associated lipoprotein QseG;protein_id=HJH9171710.1;transl_table=11 DALFDA020000009.1 tpg gene 43016 44353 . + . ID=gene-O5C65_001576;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=O5C65_001576 DALFDA020000009.1 Protein Homology CDS 43016 44353 . + 0 ID=cds-HJH9171711.1;Parent=gene-O5C65_001576;Dbxref=NCBI_GP:HJH9171711.1;Name=HJH9171711.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461497.1;locus_tag=O5C65_001576;product=two-component system response regulator GlrR;protein_id=HJH9171711.1;transl_table=11 DALFDA020000009.1 tpg gene 44430 44768 . + . ID=gene-O5C65_001577;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=O5C65_001577 DALFDA020000009.1 Protein Homology CDS 44430 44768 . + 0 ID=cds-HJH9171712.1;Parent=gene-O5C65_001577;Dbxref=NCBI_GP:HJH9171712.1;Name=HJH9171712.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=O5C65_001577;product=nitrogen regulatory protein P-II;protein_id=HJH9171712.1;transl_table=11 DALFDA020000009.1 tpg gene 44817 46277 . - . ID=gene-O5C65_001578;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=O5C65_001578 DALFDA020000009.1 Protein Homology CDS 44817 46277 . - 0 ID=cds-HJH9171713.1;Parent=gene-O5C65_001578;Dbxref=NCBI_GP:HJH9171713.1;Name=HJH9171713.1;Ontology_term=GO:0006857,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpD;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=oligopeptide transport|0006857||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461495.1;locus_tag=O5C65_001578;product=dipeptide permease DtpD;protein_id=HJH9171713.1;transl_table=11 DALFDA020000009.1 tpg gene 46333 48477 . - . ID=gene-O5C65_001579;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=O5C65_001579 DALFDA020000009.1 Protein Homology CDS 46333 48477 . - 0 ID=cds-HJH9171714.1;Parent=gene-O5C65_001579;Dbxref=NCBI_GP:HJH9171714.1;Name=HJH9171714.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461494.1;locus_tag=O5C65_001579;product=lysine decarboxylase CadA;protein_id=HJH9171714.1;transl_table=11 DALFDA020000009.1 tpg gene 48560 49891 . - . ID=gene-O5C65_001580;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=O5C65_001580 DALFDA020000009.1 Protein Homology CDS 48560 49891 . - 0 ID=cds-HJH9171715.1;Parent=gene-O5C65_001580;Dbxref=NCBI_GP:HJH9171715.1;Name=HJH9171715.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461493.1;locus_tag=O5C65_001580;product=cadaverine/lysine antiporter;protein_id=HJH9171715.1;transl_table=11 DALFDA020000009.1 tpg gene 50252 51793 . - . ID=gene-O5C65_001581;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=O5C65_001581 DALFDA020000009.1 Protein Homology CDS 50252 51793 . - 0 ID=cds-HJH9171716.1;Parent=gene-O5C65_001581;Dbxref=NCBI_GP:HJH9171716.1;Name=HJH9171716.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=cadC;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461492.1;locus_tag=O5C65_001581;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=HJH9171716.1;transl_table=11 DALFDA020000009.1 tpg gene 51975 53165 . - . ID=gene-O5C65_001582;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=O5C65_001582 DALFDA020000009.1 Protein Homology CDS 51975 53165 . - 0 ID=cds-HJH9171717.1;Parent=gene-O5C65_001582;Dbxref=NCBI_GP:HJH9171717.1;Name=HJH9171717.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461491.1;locus_tag=O5C65_001582;product=NO-inducible flavohemoprotein;protein_id=HJH9171717.1;transl_table=11 DALFDA020000009.1 tpg gene 53490 54743 . + . ID=gene-O5C65_001583;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=O5C65_001583 DALFDA020000009.1 Protein Homology CDS 53490 54743 . + 0 ID=cds-HJH9171718.1;Parent=gene-O5C65_001583;Dbxref=NCBI_GP:HJH9171718.1;Name=HJH9171718.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=O5C65_001583;product=serine hydroxymethyltransferase;protein_id=HJH9171718.1;transl_table=11 DALFDA020000009.1 tpg gene 54939 56078 . + . ID=gene-O5C65_001584;Name=O5C65_001584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001584 DALFDA020000009.1 Protein Homology CDS 54939 56078 . + 0 ID=cds-HJH9171719.1;Parent=gene-O5C65_001584;Dbxref=NCBI_GP:HJH9171719.1;Name=HJH9171719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461489.1;locus_tag=O5C65_001584;product=3-phenylpropionate MFS transporter;protein_id=HJH9171719.1;transl_table=11 DALFDA020000009.1 tpg gene 56073 57350 . - . ID=gene-O5C65_001585;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=O5C65_001585 DALFDA020000009.1 Protein Homology CDS 56073 57350 . - 0 ID=cds-HJH9171720.1;Parent=gene-O5C65_001585;Dbxref=NCBI_GP:HJH9171720.1;Name=HJH9171720.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461488.1;locus_tag=O5C65_001585;product=stationary phase inducible protein CsiE;protein_id=HJH9171720.1;transl_table=11 DALFDA020000009.1 tpg gene 57476 58114 . + . ID=gene-O5C65_001586;Name=O5C65_001586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001586 DALFDA020000009.1 Protein Homology CDS 57476 58114 . + 0 ID=cds-HJH9171721.1;Parent=gene-O5C65_001586;Dbxref=NCBI_GP:HJH9171721.1;Name=HJH9171721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461487.1;locus_tag=O5C65_001586;product=DUF1007 family protein;protein_id=HJH9171721.1;transl_table=11 DALFDA020000009.1 tpg gene 58105 59091 . + . ID=gene-O5C65_001587;Name=O5C65_001587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001587 DALFDA020000009.1 Protein Homology CDS 58105 59091 . + 0 ID=cds-HJH9171722.1;Parent=gene-O5C65_001587;Dbxref=NCBI_GP:HJH9171722.1;Name=HJH9171722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461486.1;locus_tag=O5C65_001587;product=nickel/cobalt transporter;protein_id=HJH9171722.1;transl_table=11 DALFDA020000009.1 tpg gene 59092 60105 . - . ID=gene-O5C65_001588;Name=asrC;gbkey=Gene;gene=asrC;gene_biotype=protein_coding;locus_tag=O5C65_001588 DALFDA020000009.1 Protein Homology CDS 59092 60105 . - 0 ID=cds-HJH9171723.1;Parent=gene-O5C65_001588;Dbxref=NCBI_GP:HJH9171723.1;Name=HJH9171723.1;Ontology_term=GO:0006790,GO:0016002;gbkey=CDS;gene=asrC;go_function=sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461485.1;locus_tag=O5C65_001588;product=sulfite reductase subunit C;protein_id=HJH9171723.1;transl_table=11 DALFDA020000009.1 tpg gene 60116 60934 . - . ID=gene-O5C65_001589;Name=asrB;gbkey=Gene;gene=asrB;gene_biotype=protein_coding;locus_tag=O5C65_001589 DALFDA020000009.1 Protein Homology CDS 60116 60934 . - 0 ID=cds-HJH9171724.1;Parent=gene-O5C65_001589;Dbxref=NCBI_GP:HJH9171724.1;Name=HJH9171724.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrB;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461484.1;locus_tag=O5C65_001589;product=anaerobic sulfite reductase subunit AsrB;protein_id=HJH9171724.1;transl_table=11 DALFDA020000009.1 tpg gene 60938 61981 . - . ID=gene-O5C65_001590;Name=asrA;gbkey=Gene;gene=asrA;gene_biotype=protein_coding;locus_tag=O5C65_001590 DALFDA020000009.1 Protein Homology CDS 60938 61981 . - 0 ID=cds-HJH9171725.1;Parent=gene-O5C65_001590;Dbxref=NCBI_GP:HJH9171725.1;Name=HJH9171725.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrA;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461483.1;locus_tag=O5C65_001590;product=anaerobic sulfite reductase subunit AsrA;protein_id=HJH9171725.1;transl_table=11 DALFDA020000009.1 tpg gene 62163 63041 . - . ID=gene-O5C65_001591;Name=O5C65_001591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001591 DALFDA020000009.1 Protein Homology CDS 62163 63041 . - 0 ID=cds-HJH9171726.1;Parent=gene-O5C65_001591;Dbxref=NCBI_GP:HJH9171726.1;Name=HJH9171726.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461482.1;locus_tag=O5C65_001591;product=alpha/beta hydrolase;protein_id=HJH9171726.1;transl_table=11 DALFDA020000009.1 tpg gene 63186 63989 . - . ID=gene-O5C65_001592;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=O5C65_001592 DALFDA020000009.1 Protein Homology CDS 63186 63989 . - 0 ID=cds-HJH9171727.1;Parent=gene-O5C65_001592;Dbxref=NCBI_GP:HJH9171727.1;Name=HJH9171727.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=O5C65_001592;product=inositol-1-monophosphatase;protein_id=HJH9171727.1;transl_table=11 DALFDA020000009.1 tpg gene 64108 64839 . + . ID=gene-O5C65_001593;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=O5C65_001593 DALFDA020000009.1 Protein Homology CDS 64108 64839 . + 0 ID=cds-HJH9171728.1;Parent=gene-O5C65_001593;Dbxref=NCBI_GP:HJH9171728.1;Name=HJH9171728.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461480.1;locus_tag=O5C65_001593;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=HJH9171728.1;transl_table=11 DALFDA020000009.1 tpg gene 64999 65493 . + . ID=gene-O5C65_001594;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=O5C65_001594 DALFDA020000009.1 Protein Homology CDS 64999 65493 . + 0 ID=cds-HJH9171729.1;Parent=gene-O5C65_001594;Dbxref=NCBI_GP:HJH9171729.1;Name=HJH9171729.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241352.1;locus_tag=O5C65_001594;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=HJH9171729.1;transl_table=11 DALFDA020000009.1 tpg gene 65674 66888 . + . ID=gene-O5C65_001595;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=O5C65_001595 DALFDA020000009.1 Protein Homology CDS 65674 66888 . + 0 ID=cds-HJH9171730.1;Parent=gene-O5C65_001595;Dbxref=NCBI_GP:HJH9171730.1;Name=HJH9171730.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=O5C65_001595;product=cysteine desulfurase;protein_id=HJH9171730.1;transl_table=11 DALFDA020000009.1 tpg gene 66916 67302 . + . ID=gene-O5C65_001596;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=O5C65_001596 DALFDA020000009.1 Protein Homology CDS 66916 67302 . + 0 ID=cds-HJH9171731.1;Parent=gene-O5C65_001596;Dbxref=NCBI_GP:HJH9171731.1;Name=HJH9171731.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=O5C65_001596;product=Fe-S cluster assembly scaffold IscU;protein_id=HJH9171731.1;transl_table=11 DALFDA020000009.1 tpg gene 67331 67654 . + . ID=gene-O5C65_001597;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=O5C65_001597 DALFDA020000009.1 Protein Homology CDS 67331 67654 . + 0 ID=cds-HJH9171732.1;Parent=gene-O5C65_001597;Dbxref=NCBI_GP:HJH9171732.1;Name=HJH9171732.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461476.1;locus_tag=O5C65_001597;product=iron-sulfur cluster assembly protein IscA;protein_id=HJH9171732.1;transl_table=11 DALFDA020000009.1 tpg gene 67850 68365 . + . ID=gene-O5C65_001598;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=O5C65_001598 DALFDA020000009.1 Protein Homology CDS 67850 68365 . + 0 ID=cds-HJH9171733.1;Parent=gene-O5C65_001598;Dbxref=NCBI_GP:HJH9171733.1;Name=HJH9171733.1;Ontology_term=GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461475.1;locus_tag=O5C65_001598;product=co-chaperone HscB;protein_id=HJH9171733.1;transl_table=11 DALFDA020000009.1 tpg gene 68378 70228 . + . ID=gene-O5C65_001599;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=O5C65_001599 DALFDA020000009.1 Protein Homology CDS 68378 70228 . + 0 ID=cds-HJH9171734.1;Parent=gene-O5C65_001599;Dbxref=NCBI_GP:HJH9171734.1;Name=HJH9171734.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=O5C65_001599;product=Fe-S protein assembly chaperone HscA;protein_id=HJH9171734.1;transl_table=11 DALFDA020000009.1 tpg gene 70230 70565 . + . ID=gene-O5C65_001600;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=O5C65_001600 DALFDA020000009.1 Protein Homology CDS 70230 70565 . + 0 ID=cds-HJH9171735.1;Parent=gene-O5C65_001600;Dbxref=NCBI_GP:HJH9171735.1;Name=HJH9171735.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=O5C65_001600;product=ISC system 2Fe-2S type ferredoxin;protein_id=HJH9171735.1;transl_table=11 DALFDA020000009.1 tpg gene 70577 70777 . + . ID=gene-O5C65_001601;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=O5C65_001601 DALFDA020000009.1 Protein Homology CDS 70577 70777 . + 0 ID=cds-HJH9171736.1;Parent=gene-O5C65_001601;Dbxref=NCBI_GP:HJH9171736.1;Name=HJH9171736.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=O5C65_001601;product=Fe-S cluster assembly protein IscX;protein_id=HJH9171736.1;transl_table=11 DALFDA020000009.1 tpg gene 70831 72114 . + . ID=gene-O5C65_001602;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=O5C65_001602 DALFDA020000009.1 Protein Homology CDS 70831 72114 . + 0 ID=cds-HJH9171737.1;Parent=gene-O5C65_001602;Dbxref=NCBI_GP:HJH9171737.1;Name=HJH9171737.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461471.1;locus_tag=O5C65_001602;product=aminopeptidase PepB;protein_id=HJH9171737.1;transl_table=11 DALFDA020000009.1 tpg gene 72224 73000 . + . ID=gene-O5C65_001603;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=O5C65_001603 DALFDA020000009.1 Protein Homology CDS 72224 73000 . + 0 ID=cds-HJH9171738.1;Parent=gene-O5C65_001603;Dbxref=NCBI_GP:HJH9171738.1;Name=HJH9171738.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311415.2;locus_tag=O5C65_001603;product=enhanced serine sensitivity protein SseB;protein_id=HJH9171738.1;transl_table=11 DALFDA020000009.1 tpg gene 73037 73153 . - . ID=gene-O5C65_001604;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=O5C65_001604 DALFDA020000009.1 Protein Homology CDS 73037 73153 . - 0 ID=cds-HJH9171739.1;Parent=gene-O5C65_001604;Dbxref=NCBI_GP:HJH9171739.1;Name=HJH9171739.1;gbkey=CDS;gene=timP;inference=COORDINATES: protein motif:HMM:NF040796.1;locus_tag=O5C65_001604;product=small toxic inner membrane protein TimP;protein_id=HJH9171739.1;transl_table=11 DALFDA020000009.1 tpg gene 73569 74237 . - . ID=gene-O5C65_001605;Name=O5C65_001605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001605 DALFDA020000009.1 Protein Homology CDS 73569 74237 . - 0 ID=cds-HJH9171740.1;Parent=gene-O5C65_001605;Dbxref=NCBI_GP:HJH9171740.1;Name=HJH9171740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461469.1;locus_tag=O5C65_001605;product=DUF5066 family protein;protein_id=HJH9171740.1;transl_table=11 DALFDA020000009.1 tpg gene 74280 74504 . + . ID=gene-O5C65_001606;Name=O5C65_001606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001606 DALFDA020000009.1 Protein Homology CDS 74280 74504 . + 0 ID=cds-HJH9171741.1;Parent=gene-O5C65_001606;Dbxref=NCBI_GP:HJH9171741.1;Name=HJH9171741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344128.1;locus_tag=O5C65_001606;product=hypothetical protein;protein_id=HJH9171741.1;transl_table=11 DALFDA020000009.1 tpg gene 74484 75326 . - . ID=gene-O5C65_001607;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=O5C65_001607 DALFDA020000009.1 Protein Homology CDS 74484 75326 . - 0 ID=cds-HJH9171742.1;Parent=gene-O5C65_001607;Dbxref=NCBI_GP:HJH9171742.1;Name=HJH9171742.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461468.1;locus_tag=O5C65_001607;product=3-mercaptopyruvate sulfurtransferase;protein_id=HJH9171742.1;transl_table=11 DALFDA020000009.1 tpg gene 75535 80469 . + . ID=gene-O5C65_001608;Name=O5C65_001608;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001608 DALFDA020000009.1 Protein Homology CDS 75535 80469 . + 0 ID=cds-HJH9171743.1;Parent=gene-O5C65_001608;Dbxref=NCBI_GP:HJH9171743.1;Name=HJH9171743.1;Ontology_term=GO:0010951,GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;go_process=negative regulation of endopeptidase activity|0010951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461467.1;locus_tag=O5C65_001608;product=alpha-2-macroglobulin family protein;protein_id=HJH9171743.1;transl_table=11 DALFDA020000009.1 tpg gene 80470 82785 . + . ID=gene-O5C65_001609;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=O5C65_001609 DALFDA020000009.1 Protein Homology CDS 80470 82785 . + 0 ID=cds-HJH9171744.1;Parent=gene-O5C65_001609;Dbxref=NCBI_GP:HJH9171744.1;Name=HJH9171744.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461466.1;locus_tag=O5C65_001609;product=peptidoglycan glycosyltransferase PbpC;protein_id=HJH9171744.1;transl_table=11 DALFDA020000009.1 tpg gene 82941 85319 . + . ID=gene-O5C65_001610;Name=O5C65_001610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001610 DALFDA020000009.1 Protein Homology CDS 82941 85319 . + 0 ID=cds-HJH9171745.1;Parent=gene-O5C65_001610;Dbxref=NCBI_GP:HJH9171745.1;Name=HJH9171745.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664463.1;locus_tag=O5C65_001610;product=DMSO/selenate family reductase complex A subunit;protein_id=HJH9171745.1;transl_table=11 DALFDA020000009.1 tpg gene 85316 85945 . + . ID=gene-O5C65_001611;Name=O5C65_001611;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001611 DALFDA020000009.1 Protein Homology CDS 85316 85945 . + 0 ID=cds-HJH9171746.1;Parent=gene-O5C65_001611;Dbxref=NCBI_GP:HJH9171746.1;Name=HJH9171746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461464.1;locus_tag=O5C65_001611;product=DMSO/selenate family reductase complex B subunit;protein_id=HJH9171746.1;transl_table=11 DALFDA020000009.1 tpg gene 85938 86747 . + . ID=gene-O5C65_001612;Name=O5C65_001612;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001612 DALFDA020000009.1 Protein Homology CDS 85938 86747 . + 0 ID=cds-HJH9171747.1;Parent=gene-O5C65_001612;Dbxref=NCBI_GP:HJH9171747.1;Name=HJH9171747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461463.2;locus_tag=O5C65_001612;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=HJH9171747.1;transl_table=11 DALFDA020000009.1 tpg gene 86747 87610 . + . ID=gene-O5C65_001613;Name=O5C65_001613;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001613 DALFDA020000009.1 Protein Homology CDS 86747 87610 . + 0 ID=cds-HJH9171748.1;Parent=gene-O5C65_001613;Dbxref=NCBI_GP:HJH9171748.1;Name=HJH9171748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461462.1;locus_tag=O5C65_001613;product=4Fe-4S binding protein;protein_id=HJH9171748.1;transl_table=11 DALFDA020000009.1 tpg gene 87731 88162 . + . ID=gene-O5C65_001614;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=O5C65_001614 DALFDA020000009.1 Protein Homology CDS 87731 88162 . + 0 ID=cds-HJH9171749.1;Parent=gene-O5C65_001614;Dbxref=NCBI_GP:HJH9171749.1;Name=HJH9171749.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=O5C65_001614;product=nucleoside-diphosphate kinase;protein_id=HJH9171749.1;transl_table=11 DALFDA020000009.1 tpg gene 88369 89535 . + . ID=gene-O5C65_001615;Name=O5C65_001615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001615 DALFDA020000009.1 Protein Homology CDS 88369 89535 . + 0 ID=cds-HJH9171750.1;Parent=gene-O5C65_001615;Dbxref=NCBI_GP:HJH9171750.1;Name=HJH9171750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461460.1;locus_tag=O5C65_001615;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=HJH9171750.1;transl_table=11 DALFDA020000009.1 tpg gene 89827 90843 . + . ID=gene-O5C65_001616;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=O5C65_001616 DALFDA020000009.1 Protein Homology CDS 89827 90843 . + 0 ID=cds-HJH9171751.1;Parent=gene-O5C65_001616;Dbxref=NCBI_GP:HJH9171751.1;Name=HJH9171751.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461459.1;locus_tag=O5C65_001616;product=cytoskeleton protein RodZ;protein_id=HJH9171751.1;transl_table=11 DALFDA020000009.1 tpg gene 90870 91988 . + . ID=gene-O5C65_001617;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=O5C65_001617 DALFDA020000009.1 Protein Homology CDS 90870 91988 . + 0 ID=cds-HJH9171752.1;Parent=gene-O5C65_001617;Dbxref=NCBI_GP:HJH9171752.1;Name=HJH9171752.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461458.1;locus_tag=O5C65_001617;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=HJH9171752.1;transl_table=11 DALFDA020000009.1 tpg gene 92099 93373 . + . ID=gene-O5C65_001618;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=O5C65_001618 DALFDA020000009.1 Protein Homology CDS 92099 93373 . + 0 ID=cds-HJH9171753.1;Parent=gene-O5C65_001618;Dbxref=NCBI_GP:HJH9171753.1;Name=HJH9171753.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461457.1;locus_tag=O5C65_001618;product=histidine--tRNA ligase;protein_id=HJH9171753.1;transl_table=11 DALFDA020000009.1 tpg gene 93387 94007 . + . ID=gene-O5C65_001619;Name=O5C65_001619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001619 DALFDA020000009.1 Protein Homology CDS 93387 94007 . + 0 ID=cds-HJH9171754.1;Parent=gene-O5C65_001619;Dbxref=NCBI_GP:HJH9171754.1;Name=HJH9171754.1;Ontology_term=GO:0005515,GO:0044877;gbkey=CDS;go_function=protein binding|0005515||IEA,protein-containing complex binding|0044877||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461456.1;locus_tag=O5C65_001619;product=YfgM family protein;protein_id=HJH9171754.1;transl_table=11 DALFDA020000009.1 tpg gene 94018 95196 . + . ID=gene-O5C65_001620;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=O5C65_001620 DALFDA020000009.1 Protein Homology CDS 94018 95196 . + 0 ID=cds-HJH9171755.1;Parent=gene-O5C65_001620;Dbxref=NCBI_GP:HJH9171755.1;Name=HJH9171755.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461455.1;locus_tag=O5C65_001620;product=outer membrane protein assembly factor BamB;protein_id=HJH9171755.1;transl_table=11 DALFDA020000009.1 tpg gene 95313 96785 . + . ID=gene-O5C65_001621;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=O5C65_001621 DALFDA020000009.1 Protein Homology CDS 95313 96785 . + 0 ID=cds-HJH9171756.1;Parent=gene-O5C65_001621;Dbxref=NCBI_GP:HJH9171756.1;Name=HJH9171756.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=O5C65_001621;product=ribosome biogenesis GTPase Der;protein_id=HJH9171756.1;transl_table=11 DALFDA020000009.1 tpg gene 96874 97095 . + . ID=gene-O5C65_001622;Name=O5C65_001622;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001622 DALFDA020000009.1 Protein Homology CDS 96874 97095 . + 0 ID=cds-HJH9171757.1;Parent=gene-O5C65_001622;Dbxref=NCBI_GP:HJH9171757.1;Name=HJH9171757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461453.1;locus_tag=O5C65_001622;product=zinc ribbon domain-containing protein;protein_id=HJH9171757.1;transl_table=11 DALFDA020000009.1 tpg gene 97441 99633 . + . ID=gene-O5C65_001623;Name=sinH;gbkey=Gene;gene=sinH;gene_biotype=protein_coding;locus_tag=O5C65_001623 DALFDA020000009.1 Protein Homology CDS 97441 99633 . + 0 ID=cds-HJH9171758.1;Parent=gene-O5C65_001623;Dbxref=NCBI_GP:HJH9171758.1;Name=HJH9171758.1;gbkey=CDS;gene=sinH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461452.1;locus_tag=O5C65_001623;product=intimin-like inverse autotransporter SinH;protein_id=HJH9171758.1;transl_table=11 DALFDA020000009.1 tpg gene 99691 100662 . + . ID=gene-O5C65_001624;Name=O5C65_001624;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001624 DALFDA020000009.1 Protein Homology CDS 99691 100662 . + 0 ID=cds-HJH9171759.1;Parent=gene-O5C65_001624;Dbxref=NCBI_GP:HJH9171759.1;Name=HJH9171759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461451.1;locus_tag=O5C65_001624;product=SinI family autotransporter-associated protein;protein_id=HJH9171759.1;transl_table=11 DALFDA020000009.1 tpg gene 100782 106373 . + . ID=gene-O5C65_001625;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;locus_tag=O5C65_001625 DALFDA020000009.1 Protein Homology CDS 100782 106373 . + 0 ID=cds-HJH9171760.1;Parent=gene-O5C65_001625;Dbxref=NCBI_GP:HJH9171760.1;Name=HJH9171760.1;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461450.1;locus_tag=O5C65_001625;product=DUF823/DUF824 repeat adhesin RatA;protein_id=HJH9171760.1;transl_table=11 DALFDA020000009.1 tpg gene 106539 113849 . + . ID=gene-O5C65_001626;Name=ratB;gbkey=Gene;gene=ratB;gene_biotype=protein_coding;locus_tag=O5C65_001626 DALFDA020000009.1 Protein Homology CDS 106539 113849 . + 0 ID=cds-HJH9171761.1;Parent=gene-O5C65_001626;Dbxref=NCBI_GP:HJH9171761.1;Name=HJH9171761.1;gbkey=CDS;gene=ratB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=O5C65_001626;product=DUF823/DUF824 repeat adhesin RatB;protein_id=HJH9171761.1;transl_table=11 DALFDA020000009.1 tpg pseudogene 113850 113950 . + . ID=gene-O5C65_001627;Name=O5C65_001627;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_001627;pseudo=true DALFDA020000009.1 Protein Homology CDS 113850 113950 . + 0 ID=cds-O5C65_001627;Parent=gene-O5C65_001627;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_309258417.1;locus_tag=O5C65_001627;product=IS1 family transposase;pseudo=true;transl_table=11 DALFDA020000009.1 tpg gene 114508 120651 . + . ID=gene-O5C65_001628;Name=shdA;gbkey=Gene;gene=shdA;gene_biotype=protein_coding;locus_tag=O5C65_001628 DALFDA020000009.1 Protein Homology CDS 114508 120651 . + 0 ID=cds-HJH9171762.1;Parent=gene-O5C65_001628;Dbxref=NCBI_GP:HJH9171762.1;Name=HJH9171762.1;Ontology_term=GO:0019867;gbkey=CDS;gene=shdA;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835909.1;locus_tag=O5C65_001628;product=fibronectin-binding autotransporter adhesin ShdA;protein_id=HJH9171762.1;transl_table=11 DALFDA020000009.1 tpg gene 120813 122162 . - . ID=gene-O5C65_001629;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=O5C65_001629 DALFDA020000009.1 Protein Homology CDS 120813 122162 . - 0 ID=cds-HJH9171763.1;Parent=gene-O5C65_001629;Dbxref=NCBI_GP:HJH9171763.1;Name=HJH9171763.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461447.1;locus_tag=O5C65_001629;product=exodeoxyribonuclease VII large subunit;protein_id=HJH9171763.1;transl_table=11 DALFDA020000009.1 tpg gene 122323 123789 . + . ID=gene-O5C65_001630;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=O5C65_001630 DALFDA020000009.1 Protein Homology CDS 122323 123789 . + 0 ID=cds-HJH9171764.1;Parent=gene-O5C65_001630;Dbxref=NCBI_GP:HJH9171764.1;Name=HJH9171764.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=O5C65_001630;product=IMP dehydrogenase;protein_id=HJH9171764.1;transl_table=11 DALFDA020000009.1 tpg gene 123859 125436 . + . ID=gene-O5C65_001631;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=O5C65_001631 DALFDA020000009.1 Protein Homology CDS 123859 125436 . + 0 ID=cds-HJH9171765.1;Parent=gene-O5C65_001631;Dbxref=NCBI_GP:HJH9171765.1;Name=HJH9171765.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=O5C65_001631;product=glutamine-hydrolyzing GMP synthase;protein_id=HJH9171765.1;transl_table=11 DALFDA020000009.1 tpg pseudogene 125572 125891 . + . ID=gene-O5C65_001632;Name=O5C65_001632;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_001632;pseudo=true DALFDA020000009.1 Protein Homology CDS 125572 125891 . + 0 ID=cds-O5C65_001632;Parent=gene-O5C65_001632;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611898.1;locus_tag=O5C65_001632;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 DALFDA020000009.1 tpg gene 125968 126297 . - . ID=gene-O5C65_001633;Name=O5C65_001633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001633 DALFDA020000009.1 Protein Homology CDS 125968 126297 . - 0 ID=cds-HJH9171766.1;Parent=gene-O5C65_001633;Dbxref=NCBI_GP:HJH9171766.1;Name=HJH9171766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461443.1;locus_tag=O5C65_001633;product=DUF1493 family protein;protein_id=HJH9171766.1;transl_table=11 DALFDA020000009.1 tpg gene 126282 126743 . - . ID=gene-O5C65_001634;Name=O5C65_001634;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001634 DALFDA020000009.1 Protein Homology CDS 126282 126743 . - 0 ID=cds-HJH9171767.1;Parent=gene-O5C65_001634;Dbxref=NCBI_GP:HJH9171767.1;Name=HJH9171767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_154057295.1;locus_tag=O5C65_001634;product=STM2901 family protein;protein_id=HJH9171767.1;transl_table=11 DALFDA020000009.1 tpg pseudogene 126883 127002 . + . ID=gene-O5C65_001635;Name=O5C65_001635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_001635;pseudo=true DALFDA020000009.1 Protein Homology CDS 126883 127002 . + 0 ID=cds-O5C65_001635;Parent=gene-O5C65_001635;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448901.1;locus_tag=O5C65_001635;product=hypothetical protein;pseudo=true;transl_table=11 DALFDA020000009.1 tpg gene 127080 127271 . - . ID=gene-O5C65_001636;Name=O5C65_001636;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001636 DALFDA020000009.1 Protein Homology CDS 127080 127271 . - 0 ID=cds-HJH9171768.1;Parent=gene-O5C65_001636;Dbxref=NCBI_GP:HJH9171768.1;Name=HJH9171768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461441.1;locus_tag=O5C65_001636;product=YfgG family protein;protein_id=HJH9171768.1;transl_table=11 DALFDA020000009.1 tpg gene 127450 127587 . + . ID=gene-O5C65_001637;Name=O5C65_001637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001637 DALFDA020000009.1 Protein Homology CDS 127450 127587 . + 0 ID=cds-HJH9171769.1;Parent=gene-O5C65_001637;Dbxref=NCBI_GP:HJH9171769.1;Name=HJH9171769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448898.1;locus_tag=O5C65_001637;product=hypothetical protein;protein_id=HJH9171769.1;transl_table=11 DALFDA020000009.1 tpg gene 127684 129897 . + . ID=gene-O5C65_001638;Name=O5C65_001638;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001638 DALFDA020000009.1 Protein Homology CDS 127684 129897 . + 0 ID=cds-HJH9171770.1;Parent=gene-O5C65_001638;Dbxref=NCBI_GP:HJH9171770.1;Name=HJH9171770.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0071111;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461438.1;locus_tag=O5C65_001638;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=HJH9171770.1;transl_table=11 DALFDA020000009.1 tpg gene 129933 131474 . - . ID=gene-O5C65_001639;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=O5C65_001639 DALFDA020000009.1 Protein Homology CDS 129933 131474 . - 0 ID=cds-HJH9171771.1;Parent=gene-O5C65_001639;Dbxref=NCBI_GP:HJH9171771.1;Name=HJH9171771.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461437.1;locus_tag=O5C65_001639;product=exopolyphosphatase;protein_id=HJH9171771.1;transl_table=11 DALFDA020000009.1 tpg gene 131479 133545 . - . ID=gene-O5C65_001640;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=O5C65_001640 DALFDA020000009.1 Protein Homology CDS 131479 133545 . - 0 ID=cds-HJH9171772.1;Parent=gene-O5C65_001640;Dbxref=NCBI_GP:HJH9171772.1;Name=HJH9171772.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461436.1;locus_tag=O5C65_001640;product=polyphosphate kinase 1;protein_id=HJH9171772.1;transl_table=11 DALFDA020000009.1 tpg gene 133734 134372 . - . ID=gene-O5C65_001641;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=O5C65_001641 DALFDA020000009.1 Protein Homology CDS 133734 134372 . - 0 ID=cds-HJH9171773.1;Parent=gene-O5C65_001641;Dbxref=NCBI_GP:HJH9171773.1;Name=HJH9171773.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461435.1;locus_tag=O5C65_001641;product=phosphoribosylglycinamide formyltransferase;protein_id=HJH9171773.1;transl_table=11 DALFDA020000009.1 tpg gene 134372 135409 . - . ID=gene-O5C65_001642;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=O5C65_001642 DALFDA020000009.1 Protein Homology CDS 134372 135409 . - 0 ID=cds-HJH9171774.1;Parent=gene-O5C65_001642;Dbxref=NCBI_GP:HJH9171774.1;Name=HJH9171774.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001656828.1;locus_tag=O5C65_001642;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=HJH9171774.1;transl_table=11 DALFDA020000009.1 tpg gene 135823 136449 . + . ID=gene-O5C65_001643;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=O5C65_001643 DALFDA020000009.1 Protein Homology CDS 135823 136449 . + 0 ID=cds-HJH9171775.1;Parent=gene-O5C65_001643;Dbxref=NCBI_GP:HJH9171775.1;Name=HJH9171775.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=O5C65_001643;product=uracil phosphoribosyltransferase;protein_id=HJH9171775.1;transl_table=11 DALFDA020000009.1 tpg gene 136537 137826 . + . ID=gene-O5C65_001644;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=O5C65_001644 DALFDA020000009.1 Protein Homology CDS 136537 137826 . + 0 ID=cds-HJH9171776.1;Parent=gene-O5C65_001644;Dbxref=NCBI_GP:HJH9171776.1;Name=HJH9171776.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461432.1;locus_tag=O5C65_001644;product=uracil permease;protein_id=HJH9171776.1;transl_table=11 DALFDA020000009.1 tpg gene 137921 138622 . + . ID=gene-O5C65_001645;Name=O5C65_001645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001645 DALFDA020000009.1 Protein Homology CDS 137921 138622 . + 0 ID=cds-HJH9171777.1;Parent=gene-O5C65_001645;Dbxref=NCBI_GP:HJH9171777.1;Name=HJH9171777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=O5C65_001645;product=DnaA inactivator Hda;protein_id=HJH9171777.1;transl_table=11 DALFDA020000009.1 tpg gene 138649 139008 . - . ID=gene-O5C65_001646;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=O5C65_001646 DALFDA020000009.1 Protein Homology CDS 138649 139008 . - 0 ID=cds-HJH9171778.1;Parent=gene-O5C65_001646;Dbxref=NCBI_GP:HJH9171778.1;Name=HJH9171778.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461430.1;locus_tag=O5C65_001646;product=arsenate reductase (glutaredoxin);protein_id=HJH9171778.1;transl_table=11 DALFDA020000009.1 tpg gene 139048 140511 . - . ID=gene-O5C65_001647;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=O5C65_001647 DALFDA020000009.1 Protein Homology CDS 139048 140511 . - 0 ID=cds-HJH9171779.1;Parent=gene-O5C65_001647;Dbxref=NCBI_GP:HJH9171779.1;Name=HJH9171779.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461429.1;locus_tag=O5C65_001647;product=beta-barrel assembly-enhancing protease;protein_id=HJH9171779.1;transl_table=11 DALFDA020000009.1 tpg gene 140719 141786 . + . ID=gene-O5C65_001648;Name=O5C65_001648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001648 DALFDA020000009.1 Protein Homology CDS 140719 141786 . + 0 ID=cds-HJH9171780.1;Parent=gene-O5C65_001648;Dbxref=NCBI_GP:HJH9171780.1;Name=HJH9171780.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461428.1;locus_tag=O5C65_001648;product=AI-2E family transporter;protein_id=HJH9171780.1;transl_table=11 DALFDA020000009.1 tpg gene 142062 143249 . + . ID=gene-O5C65_001649;Name=O5C65_001649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001649 DALFDA020000009.1 Protein Homology CDS 142062 143249 . + 0 ID=cds-HJH9171781.1;Parent=gene-O5C65_001649;Dbxref=NCBI_GP:HJH9171781.1;Name=HJH9171781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667973.1;locus_tag=O5C65_001649;product=sugar diacid recognition domain-containing protein;protein_id=HJH9171781.1;transl_table=11 DALFDA020000009.1 tpg gene 143317 144585 . + . ID=gene-O5C65_001650;Name=O5C65_001650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001650 DALFDA020000009.1 Protein Homology CDS 143317 144585 . + 0 ID=cds-HJH9171782.1;Parent=gene-O5C65_001650;Dbxref=NCBI_GP:HJH9171782.1;Name=HJH9171782.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090684.1;locus_tag=O5C65_001650;product=GntP family permease;protein_id=HJH9171782.1;transl_table=11 DALFDA020000009.1 tpg gene 144591 145730 . + . ID=gene-O5C65_001651;Name=O5C65_001651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001651 DALFDA020000009.1 Protein Homology CDS 144591 145730 . + 0 ID=cds-HJH9171783.1;Parent=gene-O5C65_001651;Dbxref=NCBI_GP:HJH9171783.1;Name=HJH9171783.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000706371.1;locus_tag=O5C65_001651;product=glycerate kinase;protein_id=HJH9171783.1;transl_table=11 DALFDA020000009.1 tpg gene 145777 146247 . - . ID=gene-O5C65_001652;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=O5C65_001652 DALFDA020000009.1 Protein Homology CDS 145777 146247 . - 0 ID=cds-HJH9171784.1;Parent=gene-O5C65_001652;Dbxref=NCBI_GP:HJH9171784.1;Name=HJH9171784.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461426.1;locus_tag=O5C65_001652;product=thioredoxin-dependent thiol peroxidase;protein_id=HJH9171784.1;transl_table=11 DALFDA020000009.1 tpg gene 146247 146819 . - . ID=gene-O5C65_001653;Name=O5C65_001653;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001653 DALFDA020000009.1 Protein Homology CDS 146247 146819 . - 0 ID=cds-HJH9171785.1;Parent=gene-O5C65_001653;Dbxref=NCBI_GP:HJH9171785.1;Name=HJH9171785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=O5C65_001653;product=glycine cleavage system transcriptional repressor;protein_id=HJH9171785.1;transl_table=11 DALFDA020000009.1 tpg gene 146965 147843 . + . ID=gene-O5C65_001654;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=O5C65_001654 DALFDA020000009.1 Protein Homology CDS 146965 147843 . + 0 ID=cds-HJH9171786.1;Parent=gene-O5C65_001654;Dbxref=NCBI_GP:HJH9171786.1;Name=HJH9171786.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=O5C65_001654;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=HJH9171786.1;transl_table=11 DALFDA020000009.1 tpg gene 147860 148894 . + . ID=gene-O5C65_001655;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=O5C65_001655 DALFDA020000009.1 Protein Homology CDS 147860 148894 . + 0 ID=cds-HJH9171787.1;Parent=gene-O5C65_001655;Dbxref=NCBI_GP:HJH9171787.1;Name=HJH9171787.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461423.1;locus_tag=O5C65_001655;product=outer membrane protein assembly factor BamC;protein_id=HJH9171787.1;transl_table=11 DALFDA020000009.1 tpg gene 149069 149782 . + . ID=gene-O5C65_001656;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=O5C65_001656 DALFDA020000009.1 Protein Homology CDS 149069 149782 . + 0 ID=cds-HJH9171788.1;Parent=gene-O5C65_001656;Dbxref=NCBI_GP:HJH9171788.1;Name=HJH9171788.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=O5C65_001656;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=HJH9171788.1;transl_table=11 DALFDA020000009.1 tpg gene 149913 150776 . + . ID=gene-O5C65_001657;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=O5C65_001657 DALFDA020000009.1 Protein Homology CDS 149913 150776 . + 0 ID=cds-HJH9171789.1;Parent=gene-O5C65_001657;Dbxref=NCBI_GP:HJH9171789.1;Name=HJH9171789.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461421.1;locus_tag=O5C65_001657;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=HJH9171789.1;transl_table=11 DALFDA020000009.1 tpg gene 150792 152810 . + . ID=gene-O5C65_001658;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=O5C65_001658 DALFDA020000009.1 Protein Homology CDS 150792 152810 . + 0 ID=cds-HJH9171790.1;Parent=gene-O5C65_001658;Dbxref=NCBI_GP:HJH9171790.1;Name=HJH9171790.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461420.1;locus_tag=O5C65_001658;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=HJH9171790.1;transl_table=11 DALFDA020000009.1 tpg gene 152837 153037 . - . ID=gene-O5C65_001659;Name=O5C65_001659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001659 DALFDA020000009.1 Protein Homology CDS 152837 153037 . - 0 ID=cds-HJH9171791.1;Parent=gene-O5C65_001659;Dbxref=NCBI_GP:HJH9171791.1;Name=HJH9171791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461419.1;locus_tag=O5C65_001659;product=YpfN family protein;protein_id=HJH9171791.1;transl_table=11 DALFDA020000009.1 tpg gene 153065 154192 . - . ID=gene-O5C65_001660;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=O5C65_001660 DALFDA020000009.1 Protein Homology CDS 153065 154192 . - 0 ID=cds-HJH9171792.1;Parent=gene-O5C65_001660;Dbxref=NCBI_GP:HJH9171792.1;Name=HJH9171792.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=O5C65_001660;product=succinyl-diaminopimelate desuccinylase;protein_id=HJH9171792.1;transl_table=11 DALFDA020000009.1 tpg gene 154196 154552 . - . ID=gene-O5C65_001661;Name=O5C65_001661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001661 DALFDA020000009.1 Protein Homology CDS 154196 154552 . - 0 ID=cds-HJH9171793.1;Parent=gene-O5C65_001661;Dbxref=NCBI_GP:HJH9171793.1;Name=HJH9171793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461417.1;locus_tag=O5C65_001661;product=ArsC family reductase;protein_id=HJH9171793.1;transl_table=11 DALFDA020000009.1 tpg gene 154965 155024 . + . ID=gene-O5C65_001662;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=O5C65_001662 DALFDA020000009.1 Protein Homology CDS 154965 155024 . + 0 ID=cds-HJH9171794.1;Parent=gene-O5C65_001662;Dbxref=NCBI_GP:HJH9171794.1;Name=HJH9171794.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=O5C65_001662;product=protein YpfM;protein_id=HJH9171794.1;transl_table=11 DALFDA020000009.1 tpg gene 155126 158239 . - . ID=gene-O5C65_001663;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=O5C65_001663 DALFDA020000009.1 Protein Homology CDS 155126 158239 . - 0 ID=cds-HJH9171795.1;Parent=gene-O5C65_001663;Dbxref=NCBI_GP:HJH9171795.1;Name=HJH9171795.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461416.1;locus_tag=O5C65_001663;product=multidrug efflux RND transporter permease AcrD;protein_id=HJH9171795.1;transl_table=11 DALFDA020000009.1 tpg gene 158424 160124 . - . ID=gene-O5C65_001664;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=O5C65_001664 DALFDA020000009.1 Protein Homology CDS 158424 160124 . - 0 ID=cds-HJH9171796.1;Parent=gene-O5C65_001664;Dbxref=NCBI_GP:HJH9171796.1;Name=HJH9171796.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461415.1;locus_tag=O5C65_001664;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=HJH9171796.1;transl_table=11 DALFDA020000009.1 tpg gene 160310 162271 . + . ID=gene-O5C65_001665;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=O5C65_001665 DALFDA020000009.1 Protein Homology CDS 160310 162271 . + 0 ID=cds-HJH9171797.1;Parent=gene-O5C65_001665;Dbxref=NCBI_GP:HJH9171797.1;Name=HJH9171797.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461414.1;locus_tag=O5C65_001665;product=formate-dependent uric acid utilization protein AegA;protein_id=HJH9171797.1;transl_table=11 DALFDA020000009.1 tpg gene 162720 164018 . - . ID=gene-O5C65_001666;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=O5C65_001666 DALFDA020000009.1 Protein Homology CDS 162720 164018 . - 0 ID=cds-HJH9171798.1;Parent=gene-O5C65_001666;Dbxref=NCBI_GP:HJH9171798.1;Name=HJH9171798.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461413.1;locus_tag=O5C65_001666;product=penicillin binding protein PBP4B;protein_id=HJH9171798.1;transl_table=11 DALFDA020000009.1 tpg gene 164222 164797 . + . ID=gene-O5C65_001667;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=O5C65_001667 DALFDA020000009.1 Protein Homology CDS 164222 164797 . + 0 ID=cds-HJH9171799.1;Parent=gene-O5C65_001667;Dbxref=NCBI_GP:HJH9171799.1;Name=HJH9171799.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461412.1;locus_tag=O5C65_001667;product=GDP-mannose pyrophosphatase NudK;protein_id=HJH9171799.1;transl_table=11 DALFDA020000009.1 tpg gene 164922 165965 . + . ID=gene-O5C65_001668;Name=O5C65_001668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001668 DALFDA020000009.1 Protein Homology CDS 164922 165965 . + 0 ID=cds-HJH9171800.1;Parent=gene-O5C65_001668;Dbxref=NCBI_GP:HJH9171800.1;Name=HJH9171800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461411.1;locus_tag=O5C65_001668;product=DUF1176 domain-containing protein;protein_id=HJH9171800.1;transl_table=11 DALFDA020000009.1 tpg gene 166093 166323 . + . ID=gene-O5C65_001669;Name=O5C65_001669;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001669 DALFDA020000009.1 Protein Homology CDS 166093 166323 . + 0 ID=cds-HJH9171801.1;Parent=gene-O5C65_001669;Dbxref=NCBI_GP:HJH9171801.1;Name=HJH9171801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461410.1;locus_tag=O5C65_001669;product=hypothetical protein;protein_id=HJH9171801.1;transl_table=11 DALFDA020000009.1 tpg gene 166386 168386 . - . ID=gene-O5C65_001670;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=O5C65_001670 DALFDA020000009.1 Protein Homology CDS 166386 168386 . - 0 ID=cds-HJH9171802.1;Parent=gene-O5C65_001670;Dbxref=NCBI_GP:HJH9171802.1;Name=HJH9171802.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461409.1;locus_tag=O5C65_001670;product=transketolase;protein_id=HJH9171802.1;transl_table=11 DALFDA020000009.1 tpg gene 168406 169356 . - . ID=gene-O5C65_001671;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=O5C65_001671 DALFDA020000009.1 Protein Homology CDS 168406 169356 . - 0 ID=cds-HJH9171803.1;Parent=gene-O5C65_001671;Dbxref=NCBI_GP:HJH9171803.1;Name=HJH9171803.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461408.1;locus_tag=O5C65_001671;product=transaldolase;protein_id=HJH9171803.1;transl_table=11 DALFDA020000009.1 tpg gene 169628 171907 . + . ID=gene-O5C65_001672;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=O5C65_001672 DALFDA020000009.1 Protein Homology CDS 169628 171907 . + 0 ID=cds-HJH9171804.1;Parent=gene-O5C65_001672;Dbxref=NCBI_GP:HJH9171804.1;Name=HJH9171804.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461407.1;locus_tag=O5C65_001672;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=HJH9171804.1;transl_table=11 DALFDA020000009.1 tpg gene 172324 172659 . + . ID=gene-O5C65_001673;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=O5C65_001673 DALFDA020000009.1 Protein Homology CDS 172324 172659 . + 0 ID=cds-HJH9171805.1;Parent=gene-O5C65_001673;Dbxref=NCBI_GP:HJH9171805.1;Name=HJH9171805.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461405.1;locus_tag=O5C65_001673;product=ethanolamine utilization microcompartment protein EutS;protein_id=HJH9171805.1;transl_table=11 DALFDA020000009.1 tpg gene 172672 173151 . + . ID=gene-O5C65_001674;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=O5C65_001674 DALFDA020000009.1 Protein Homology CDS 172672 173151 . + 0 ID=cds-HJH9171806.1;Parent=gene-O5C65_001674;Dbxref=NCBI_GP:HJH9171806.1;Name=HJH9171806.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461404.1;locus_tag=O5C65_001674;product=ethanolamine utilization acetate kinase EutP;protein_id=HJH9171806.1;transl_table=11 DALFDA020000009.1 tpg gene 173129 173818 . + . ID=gene-O5C65_001675;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=O5C65_001675 DALFDA020000009.1 Protein Homology CDS 173129 173818 . + 0 ID=cds-HJH9171807.1;Parent=gene-O5C65_001675;Dbxref=NCBI_GP:HJH9171807.1;Name=HJH9171807.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461403.1;locus_tag=O5C65_001675;product=ethanolamine utilization acetate kinase EutQ;protein_id=HJH9171807.1;transl_table=11 DALFDA020000009.1 tpg gene 173815 174618 . + . ID=gene-O5C65_001676;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=O5C65_001676 DALFDA020000009.1 Protein Homology CDS 173815 174618 . + 0 ID=cds-HJH9171808.1;Parent=gene-O5C65_001676;Dbxref=NCBI_GP:HJH9171808.1;Name=HJH9171808.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461402.1;locus_tag=O5C65_001676;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=HJH9171808.1;transl_table=11 DALFDA020000009.1 tpg gene 174615 175128 . + . ID=gene-O5C65_001677;Name=O5C65_001677;end_range=175128,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001677;partial=true DALFDA020000009.1 Protein Homology CDS 174615 175128 . + 0 ID=cds-HJH9171809.1;Parent=gene-O5C65_001677;Dbxref=NCBI_GP:HJH9171809.1;Name=HJH9171809.1;Ontology_term=GO:0016746;end_range=175128,.;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461401.1;locus_tag=O5C65_001677;partial=true;product=phosphate acyltransferase;protein_id=HJH9171809.1;transl_table=11 ##sequence-region DALFDA020000010.1 1 168763 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000010.1 tpg region 1 168763 . + . ID=DALFDA020000010.1:1..168763;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000010.1 tpg gene 78 899 . - . ID=gene-O5C65_001678;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=O5C65_001678 DALFDA020000010.1 Protein Homology CDS 78 899 . - 0 ID=cds-HJH9171810.1;Parent=gene-O5C65_001678;Dbxref=NCBI_GP:HJH9171810.1;Name=HJH9171810.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459069.1;locus_tag=O5C65_001678;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=HJH9171810.1;transl_table=11 DALFDA020000010.1 tpg gene 1072 1992 . - . ID=gene-O5C65_001679;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=O5C65_001679 DALFDA020000010.1 Protein Homology CDS 1072 1992 . - 0 ID=cds-HJH9171811.1;Parent=gene-O5C65_001679;Dbxref=NCBI_GP:HJH9171811.1;Name=HJH9171811.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459056.1;locus_tag=O5C65_001679;product=ribonucleoside hydrolase RihC;protein_id=HJH9171811.1;transl_table=11 DALFDA020000010.1 tpg gene 2008 3210 . - . ID=gene-O5C65_001680;Name=O5C65_001680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001680 DALFDA020000010.1 Protein Homology CDS 2008 3210 . - 0 ID=cds-HJH9171812.1;Parent=gene-O5C65_001680;Dbxref=NCBI_GP:HJH9171812.1;Name=HJH9171812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459055.1;locus_tag=O5C65_001680;product=XAC2610-related protein;protein_id=HJH9171812.1;transl_table=11 DALFDA020000010.1 tpg gene 3410 4360 . - . ID=gene-O5C65_001681;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=O5C65_001681 DALFDA020000010.1 Protein Homology CDS 3410 4360 . - 0 ID=cds-HJH9171813.1;Parent=gene-O5C65_001681;Dbxref=NCBI_GP:HJH9171813.1;Name=HJH9171813.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=O5C65_001681;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=HJH9171813.1;transl_table=11 DALFDA020000010.1 tpg gene 4363 4812 . - . ID=gene-O5C65_001682;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=O5C65_001682 DALFDA020000010.1 Protein Homology CDS 4363 4812 . - 0 ID=cds-HJH9171814.1;Parent=gene-O5C65_001682;Dbxref=NCBI_GP:HJH9171814.1;Name=HJH9171814.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459053.1;locus_tag=O5C65_001682;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=HJH9171814.1;transl_table=11 DALFDA020000010.1 tpg gene 4967 5467 . - . ID=gene-O5C65_001683;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=O5C65_001683 DALFDA020000010.1 Protein Homology CDS 4967 5467 . - 0 ID=cds-HJH9171815.1;Parent=gene-O5C65_001683;Dbxref=NCBI_GP:HJH9171815.1;Name=HJH9171815.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459052.1;locus_tag=O5C65_001683;product=signal peptidase II;protein_id=HJH9171815.1;transl_table=11 DALFDA020000010.1 tpg gene 5467 8301 . - . ID=gene-O5C65_001684;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=O5C65_001684 DALFDA020000010.1 Protein Homology CDS 5467 8301 . - 0 ID=cds-HJH9171816.1;Parent=gene-O5C65_001684;Dbxref=NCBI_GP:HJH9171816.1;Name=HJH9171816.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459051.1;locus_tag=O5C65_001684;product=isoleucine--tRNA ligase;protein_id=HJH9171816.1;transl_table=11 DALFDA020000010.1 tpg gene 8346 9284 . - . ID=gene-O5C65_001685;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=O5C65_001685 DALFDA020000010.1 Protein Homology CDS 8346 9284 . - 0 ID=cds-HJH9171817.1;Parent=gene-O5C65_001685;Dbxref=NCBI_GP:HJH9171817.1;Name=HJH9171817.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459050.1;locus_tag=O5C65_001685;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=HJH9171817.1;transl_table=11 DALFDA020000010.1 tpg gene 9292 9507 . - . ID=gene-O5C65_001686;Name=O5C65_001686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001686 DALFDA020000010.1 Protein Homology CDS 9292 9507 . - 0 ID=cds-HJH9171818.1;Parent=gene-O5C65_001686;Dbxref=NCBI_GP:HJH9171818.1;Name=HJH9171818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459049.1;locus_tag=O5C65_001686;product=DUF2575 family protein;protein_id=HJH9171818.1;transl_table=11 DALFDA020000010.1 tpg gene 9613 9876 . + . ID=gene-O5C65_001687;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=O5C65_001687 DALFDA020000010.1 Protein Homology CDS 9613 9876 . + 0 ID=cds-HJH9171819.1;Parent=gene-O5C65_001687;Dbxref=NCBI_GP:HJH9171819.1;Name=HJH9171819.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=O5C65_001687;product=30S ribosomal protein S20;protein_id=HJH9171819.1;transl_table=11 DALFDA020000010.1 tpg gene 10332 11705 . + . ID=gene-O5C65_001688;Name=O5C65_001688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001688 DALFDA020000010.1 Protein Homology CDS 10332 11705 . + 0 ID=cds-HJH9171820.1;Parent=gene-O5C65_001688;Dbxref=NCBI_GP:HJH9171820.1;Name=HJH9171820.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459047.1;locus_tag=O5C65_001688;product=MFS transporter;protein_id=HJH9171820.1;transl_table=11 DALFDA020000010.1 tpg gene 11745 13784 . + . ID=gene-O5C65_001689;Name=O5C65_001689;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001689 DALFDA020000010.1 Protein Homology CDS 11745 13784 . + 0 ID=cds-HJH9171821.1;Parent=gene-O5C65_001689;Dbxref=NCBI_GP:HJH9171821.1;Name=HJH9171821.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459046.1;locus_tag=O5C65_001689;product=glycoside hydrolase family 31 protein;protein_id=HJH9171821.1;transl_table=11 DALFDA020000010.1 tpg gene 13839 14738 . - . ID=gene-O5C65_001690;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=O5C65_001690 DALFDA020000010.1 Protein Homology CDS 13839 14738 . - 0 ID=cds-HJH9171822.1;Parent=gene-O5C65_001690;Dbxref=NCBI_GP:HJH9171822.1;Name=HJH9171822.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459045.1;locus_tag=O5C65_001690;product=transcriptional activator NhaR;protein_id=HJH9171822.1;transl_table=11 DALFDA020000010.1 tpg gene 14800 15966 . - . ID=gene-O5C65_001691;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=O5C65_001691 DALFDA020000010.1 Protein Homology CDS 14800 15966 . - 0 ID=cds-HJH9171823.1;Parent=gene-O5C65_001691;Dbxref=NCBI_GP:HJH9171823.1;Name=HJH9171823.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459044.1;locus_tag=O5C65_001691;product=Na+/H+ antiporter NhaA;protein_id=HJH9171823.1;transl_table=11 DALFDA020000010.1 tpg gene 16129 17844 . - . ID=gene-O5C65_001692;Name=O5C65_001692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001692 DALFDA020000010.1 Protein Homology CDS 16129 17844 . - 0 ID=cds-HJH9171824.1;Parent=gene-O5C65_001692;Dbxref=NCBI_GP:HJH9171824.1;Name=HJH9171824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459043.1;locus_tag=O5C65_001692;product=aryl-sulfate sulfotransferase;protein_id=HJH9171824.1;transl_table=11 DALFDA020000010.1 tpg gene 17971 19224 . - . ID=gene-O5C65_001693;Name=O5C65_001693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001693 DALFDA020000010.1 Protein Homology CDS 17971 19224 . - 0 ID=cds-HJH9171825.1;Parent=gene-O5C65_001693;Dbxref=NCBI_GP:HJH9171825.1;Name=HJH9171825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459042.1;locus_tag=O5C65_001693;product=IS1/IS1595 family N-terminal zinc-binding domain-containing protein;protein_id=HJH9171825.1;transl_table=11 DALFDA020000010.1 tpg gene 19243 20433 . - . ID=gene-O5C65_001694;Name=O5C65_001694;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001694 DALFDA020000010.1 Protein Homology CDS 19243 20433 . - 0 ID=cds-HJH9171826.1;Parent=gene-O5C65_001694;Dbxref=NCBI_GP:HJH9171826.1;Name=HJH9171826.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459041.1;locus_tag=O5C65_001694;product=anaerobic sulfatase maturase;protein_id=HJH9171826.1;transl_table=11 DALFDA020000010.1 tpg gene 20532 22025 . - . ID=gene-O5C65_001695;Name=O5C65_001695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001695 DALFDA020000010.1 Protein Homology CDS 20532 22025 . - 0 ID=cds-HJH9171827.1;Parent=gene-O5C65_001695;Dbxref=NCBI_GP:HJH9171827.1;Name=HJH9171827.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459040.1;locus_tag=O5C65_001695;product=sulfatase family protein;protein_id=HJH9171827.1;transl_table=11 DALFDA020000010.1 tpg gene 22620 23381 . + . ID=gene-O5C65_001696;Name=O5C65_001696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001696 DALFDA020000010.1 Protein Homology CDS 22620 23381 . + 0 ID=cds-HJH9171828.1;Parent=gene-O5C65_001696;Dbxref=NCBI_GP:HJH9171828.1;Name=HJH9171828.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459039.1;locus_tag=O5C65_001696;product=outer membrane protein OmpK;protein_id=HJH9171828.1;transl_table=11 DALFDA020000010.1 tpg gene 23480 25051 . + . ID=gene-O5C65_001697;Name=O5C65_001697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001697 DALFDA020000010.1 Protein Homology CDS 23480 25051 . + 0 ID=cds-HJH9171829.1;Parent=gene-O5C65_001697;Dbxref=NCBI_GP:HJH9171829.1;Name=HJH9171829.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459038.1;locus_tag=O5C65_001697;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=HJH9171829.1;transl_table=11 DALFDA020000010.1 tpg gene 25097 26815 . - . ID=gene-O5C65_001698;Name=O5C65_001698;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001698 DALFDA020000010.1 Protein Homology CDS 25097 26815 . - 0 ID=cds-HJH9171830.1;Parent=gene-O5C65_001698;Dbxref=NCBI_GP:HJH9171830.1;Name=HJH9171830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459037.1;locus_tag=O5C65_001698;product=aryl-sulfate sulfotransferase;protein_id=HJH9171830.1;transl_table=11 DALFDA020000010.1 tpg gene 27338 27775 . + . ID=gene-O5C65_001699;Name=O5C65_001699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001699 DALFDA020000010.1 Protein Homology CDS 27338 27775 . + 0 ID=cds-HJH9171831.1;Parent=gene-O5C65_001699;Dbxref=NCBI_GP:HJH9171831.1;Name=HJH9171831.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459036.1;locus_tag=O5C65_001699;product=winged helix-turn-helix domain-containing protein;protein_id=HJH9171831.1;transl_table=11 DALFDA020000010.1 tpg gene 27783 28787 . - . ID=gene-O5C65_001700;Name=O5C65_001700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001700 DALFDA020000010.1 Protein Homology CDS 27783 28787 . - 0 ID=cds-HJH9171832.1;Parent=gene-O5C65_001700;Dbxref=NCBI_GP:HJH9171832.1;Name=HJH9171832.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459035.1;locus_tag=O5C65_001700;product=LysR family transcriptional regulator;protein_id=HJH9171832.1;transl_table=11 DALFDA020000010.1 tpg gene 29157 29606 . + . ID=gene-O5C65_001701;Name=O5C65_001701;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001701 DALFDA020000010.1 Protein Homology CDS 29157 29606 . + 0 ID=cds-HJH9171833.1;Parent=gene-O5C65_001701;Dbxref=NCBI_GP:HJH9171833.1;Name=HJH9171833.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459034.1;locus_tag=O5C65_001701;product=winged helix-turn-helix domain-containing protein;protein_id=HJH9171833.1;transl_table=11 DALFDA020000010.1 tpg gene 29706 29993 . - . ID=gene-O5C65_001702;Name=O5C65_001702;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001702 DALFDA020000010.1 Protein Homology CDS 29706 29993 . - 0 ID=cds-HJH9171834.1;Parent=gene-O5C65_001702;Dbxref=NCBI_GP:HJH9171834.1;Name=HJH9171834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000839835.1;locus_tag=O5C65_001702;product=hypothetical protein;protein_id=HJH9171834.1;transl_table=11 DALFDA020000010.1 tpg gene 30032 30877 . - . ID=gene-O5C65_001703;Name=O5C65_001703;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001703 DALFDA020000010.1 Protein Homology CDS 30032 30877 . - 0 ID=cds-HJH9171835.1;Parent=gene-O5C65_001703;Dbxref=NCBI_GP:HJH9171835.1;Name=HJH9171835.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459033.1;locus_tag=O5C65_001703;product=DsbA family protein;protein_id=HJH9171835.1;transl_table=11 DALFDA020000010.1 tpg gene 30942 31673 . - . ID=gene-O5C65_001704;Name=bcfG;gbkey=Gene;gene=bcfG;gene_biotype=protein_coding;locus_tag=O5C65_001704 DALFDA020000010.1 Protein Homology CDS 30942 31673 . - 0 ID=cds-HJH9171836.1;Parent=gene-O5C65_001704;Dbxref=NCBI_GP:HJH9171836.1;Name=HJH9171836.1;gbkey=CDS;gene=bcfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459032.1;locus_tag=O5C65_001704;product=fimbrial chaperone BcfG;protein_id=HJH9171836.1;transl_table=11 DALFDA020000010.1 tpg gene 31639 32157 . - . ID=gene-O5C65_001705;Name=O5C65_001705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001705 DALFDA020000010.1 Protein Homology CDS 31639 32157 . - 0 ID=cds-HJH9171837.1;Parent=gene-O5C65_001705;Dbxref=NCBI_GP:HJH9171837.1;Name=HJH9171837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459031.1;locus_tag=O5C65_001705;product=fimbrial protein BcfF;protein_id=HJH9171837.1;transl_table=11 DALFDA020000010.1 tpg gene 32173 32718 . - . ID=gene-O5C65_001706;Name=O5C65_001706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001706 DALFDA020000010.1 Protein Homology CDS 32173 32718 . - 0 ID=cds-HJH9171838.1;Parent=gene-O5C65_001706;Dbxref=NCBI_GP:HJH9171838.1;Name=HJH9171838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459030.1;locus_tag=O5C65_001706;product=fimbrial protein BcfE;protein_id=HJH9171838.1;transl_table=11 DALFDA020000010.1 tpg gene 32719 33726 . - . ID=gene-O5C65_001707;Name=O5C65_001707;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001707 DALFDA020000010.1 Protein Homology CDS 32719 33726 . - 0 ID=cds-HJH9171839.1;Parent=gene-O5C65_001707;Dbxref=NCBI_GP:HJH9171839.1;Name=HJH9171839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459029.1;locus_tag=O5C65_001707;product=fimbrial protein BcfD;protein_id=HJH9171839.1;transl_table=11 DALFDA020000010.1 tpg gene 33727 36348 . - . ID=gene-O5C65_001708;Name=bcfC;gbkey=Gene;gene=bcfC;gene_biotype=protein_coding;locus_tag=O5C65_001708 DALFDA020000010.1 Protein Homology CDS 33727 36348 . - 0 ID=cds-HJH9171840.1;Parent=gene-O5C65_001708;Dbxref=NCBI_GP:HJH9171840.1;Name=HJH9171840.1;gbkey=CDS;gene=bcfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459028.1;locus_tag=O5C65_001708;product=fimbrial usher BcfC;protein_id=HJH9171840.1;transl_table=11 DALFDA020000010.1 tpg gene 36353 37039 . - . ID=gene-O5C65_001709;Name=bcfB;gbkey=Gene;gene=bcfB;gene_biotype=protein_coding;locus_tag=O5C65_001709 DALFDA020000010.1 Protein Homology CDS 36353 37039 . - 0 ID=cds-HJH9171841.1;Parent=gene-O5C65_001709;Dbxref=NCBI_GP:HJH9171841.1;Name=HJH9171841.1;gbkey=CDS;gene=bcfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459027.1;locus_tag=O5C65_001709;product=fimbrial biogenesis chaperone BcfB;protein_id=HJH9171841.1;transl_table=11 DALFDA020000010.1 tpg gene 37140 37682 . - . ID=gene-O5C65_001710;Name=O5C65_001710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001710 DALFDA020000010.1 Protein Homology CDS 37140 37682 . - 0 ID=cds-HJH9171842.1;Parent=gene-O5C65_001710;Dbxref=NCBI_GP:HJH9171842.1;Name=HJH9171842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459026.1;locus_tag=O5C65_001710;product=fimbrial protein BcfA;protein_id=HJH9171842.1;transl_table=11 DALFDA020000010.1 tpg gene 38112 38807 . - . ID=gene-O5C65_001711;Name=O5C65_001711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001711 DALFDA020000010.1 Protein Homology CDS 38112 38807 . - 0 ID=cds-HJH9171843.1;Parent=gene-O5C65_001711;Dbxref=NCBI_GP:HJH9171843.1;Name=HJH9171843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527260.1;locus_tag=O5C65_001711;product=helix-turn-helix domain-containing protein;protein_id=HJH9171843.1;transl_table=11 DALFDA020000010.1 tpg gene 39098 42094 . - . ID=gene-O5C65_001712;Name=O5C65_001712;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001712 DALFDA020000010.1 Protein Homology CDS 39098 42094 . - 0 ID=cds-HJH9171844.1;Parent=gene-O5C65_001712;Dbxref=NCBI_GP:HJH9171844.1;Name=HJH9171844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459024.1;locus_tag=O5C65_001712;product=chitinase;protein_id=HJH9171844.1;transl_table=11 DALFDA020000010.1 tpg gene 42187 44292 . - . ID=gene-O5C65_001713;Name=O5C65_001713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001713 DALFDA020000010.1 Protein Homology CDS 42187 44292 . - 0 ID=cds-HJH9171845.1;Parent=gene-O5C65_001713;Dbxref=NCBI_GP:HJH9171845.1;Name=HJH9171845.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459023.1;locus_tag=O5C65_001713;product=glycosyl hydrolase family 18 protein;protein_id=HJH9171845.1;transl_table=11 DALFDA020000010.1 tpg gene 44673 45116 . + . ID=gene-O5C65_001714;Name=O5C65_001714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001714 DALFDA020000010.1 Protein Homology CDS 44673 45116 . + 0 ID=cds-HJH9171846.1;Parent=gene-O5C65_001714;Dbxref=NCBI_GP:HJH9171846.1;Name=HJH9171846.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459022.1;locus_tag=O5C65_001714;product=winged helix-turn-helix domain-containing protein;protein_id=HJH9171846.1;transl_table=11 DALFDA020000010.1 tpg gene 45133 45666 . + . ID=gene-O5C65_001715;Name=O5C65_001715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001715 DALFDA020000010.1 Protein Homology CDS 45133 45666 . + 0 ID=cds-HJH9171847.1;Parent=gene-O5C65_001715;Dbxref=NCBI_GP:HJH9171847.1;Name=HJH9171847.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459021.1;locus_tag=O5C65_001715;product=glycoside hydrolase family 108 protein;protein_id=HJH9171847.1;transl_table=11 DALFDA020000010.1 tpg gene 45727 46071 . - . ID=gene-O5C65_001716;Name=O5C65_001716;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001716 DALFDA020000010.1 Protein Homology CDS 45727 46071 . - 0 ID=cds-HJH9171848.1;Parent=gene-O5C65_001716;Dbxref=NCBI_GP:HJH9171848.1;Name=HJH9171848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459020.1;locus_tag=O5C65_001716;product=phage holin family protein;protein_id=HJH9171848.1;transl_table=11 DALFDA020000010.1 tpg gene 46198 47145 . - . ID=gene-O5C65_001717;Name=O5C65_001717;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001717 DALFDA020000010.1 Protein Homology CDS 46198 47145 . - 0 ID=cds-HJH9171849.1;Parent=gene-O5C65_001717;Dbxref=NCBI_GP:HJH9171849.1;Name=HJH9171849.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459019.1;locus_tag=O5C65_001717;product=LysR family transcriptional regulator;protein_id=HJH9171849.1;transl_table=11 DALFDA020000010.1 tpg gene 47426 48565 . - . ID=gene-O5C65_001718;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=O5C65_001718 DALFDA020000010.1 Protein Homology CDS 47426 48565 . - 0 ID=cds-HJH9171850.1;Parent=gene-O5C65_001718;Dbxref=NCBI_GP:HJH9171850.1;Name=HJH9171850.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459018.1;locus_tag=O5C65_001718;product=molecular chaperone DnaJ;protein_id=HJH9171850.1;transl_table=11 DALFDA020000010.1 tpg gene 48651 50567 . - . ID=gene-O5C65_001719;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=O5C65_001719 DALFDA020000010.1 Protein Homology CDS 48651 50567 . - 0 ID=cds-HJH9171851.1;Parent=gene-O5C65_001719;Dbxref=NCBI_GP:HJH9171851.1;Name=HJH9171851.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=O5C65_001719;product=molecular chaperone DnaK;protein_id=HJH9171851.1;transl_table=11 DALFDA020000010.1 tpg gene 50916 51320 . + . ID=gene-O5C65_001720;Name=O5C65_001720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001720 DALFDA020000010.1 Protein Homology CDS 50916 51320 . + 0 ID=cds-HJH9171852.1;Parent=gene-O5C65_001720;Dbxref=NCBI_GP:HJH9171852.1;Name=HJH9171852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459016.1;locus_tag=O5C65_001720;product=DUF2541 family protein;protein_id=HJH9171852.1;transl_table=11 DALFDA020000010.1 tpg gene 51356 52069 . + . ID=gene-O5C65_001721;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=O5C65_001721 DALFDA020000010.1 Protein Homology CDS 51356 52069 . + 0 ID=cds-HJH9171853.1;Parent=gene-O5C65_001721;Dbxref=NCBI_GP:HJH9171853.1;Name=HJH9171853.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459015.1;locus_tag=O5C65_001721;product=acidic protein MsyB;protein_id=HJH9171853.1;transl_table=11 DALFDA020000010.1 tpg gene 52219 52785 . + . ID=gene-O5C65_001722;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=O5C65_001722 DALFDA020000010.1 Protein Homology CDS 52219 52785 . + 0 ID=cds-HJH9171854.1;Parent=gene-O5C65_001722;Dbxref=NCBI_GP:HJH9171854.1;Name=HJH9171854.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459014.1;locus_tag=O5C65_001722;product=acetate uptake transporter;protein_id=HJH9171854.1;transl_table=11 DALFDA020000010.1 tpg gene 52842 53432 . - . ID=gene-O5C65_001723;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=O5C65_001723 DALFDA020000010.1 Protein Homology CDS 52842 53432 . - 0 ID=cds-HJH9171855.1;Parent=gene-O5C65_001723;Dbxref=NCBI_GP:HJH9171855.1;Name=HJH9171855.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380375.1;locus_tag=O5C65_001723;product=molybdopterin adenylyltransferase;protein_id=HJH9171855.1;transl_table=11 DALFDA020000010.1 tpg gene 53543 54496 . - . ID=gene-O5C65_001724;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=O5C65_001724 DALFDA020000010.1 Protein Homology CDS 53543 54496 . - 0 ID=cds-HJH9171856.1;Parent=gene-O5C65_001724;Dbxref=NCBI_GP:HJH9171856.1;Name=HJH9171856.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459012.1;locus_tag=O5C65_001724;product=transaldolase;protein_id=HJH9171856.1;transl_table=11 DALFDA020000010.1 tpg gene 54765 56195 . + . ID=gene-O5C65_001725;Name=O5C65_001725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001725 DALFDA020000010.1 Protein Homology CDS 54765 56195 . + 0 ID=cds-HJH9171857.1;Parent=gene-O5C65_001725;Dbxref=NCBI_GP:HJH9171857.1;Name=HJH9171857.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459011.1;locus_tag=O5C65_001725;product=alanine/glycine:cation symporter family protein;protein_id=HJH9171857.1;transl_table=11 DALFDA020000010.1 tpg gene 56274 57047 . + . ID=gene-O5C65_001726;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=O5C65_001726 DALFDA020000010.1 Protein Homology CDS 56274 57047 . + 0 ID=cds-HJH9171858.1;Parent=gene-O5C65_001726;Dbxref=NCBI_GP:HJH9171858.1;Name=HJH9171858.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459010.1;locus_tag=O5C65_001726;product=peroxide stress protein YaaA;protein_id=HJH9171858.1;transl_table=11 DALFDA020000010.1 tpg gene 57141 58427 . - . ID=gene-O5C65_001727;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=O5C65_001727 DALFDA020000010.1 Protein Homology CDS 57141 58427 . - 0 ID=cds-HJH9171859.1;Parent=gene-O5C65_001727;Dbxref=NCBI_GP:HJH9171859.1;Name=HJH9171859.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459009.1;locus_tag=O5C65_001727;product=threonine synthase;protein_id=HJH9171859.1;transl_table=11 DALFDA020000010.1 tpg gene 58431 59360 . - . ID=gene-O5C65_001728;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=O5C65_001728 DALFDA020000010.1 Protein Homology CDS 58431 59360 . - 0 ID=cds-HJH9171860.1;Parent=gene-O5C65_001728;Dbxref=NCBI_GP:HJH9171860.1;Name=HJH9171860.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459008.1;locus_tag=O5C65_001728;product=homoserine kinase;protein_id=HJH9171860.1;transl_table=11 DALFDA020000010.1 tpg gene 59362 61824 . - . ID=gene-O5C65_001729;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=O5C65_001729 DALFDA020000010.1 Protein Homology CDS 59362 61824 . - 0 ID=cds-HJH9171861.1;Parent=gene-O5C65_001729;Dbxref=NCBI_GP:HJH9171861.1;Name=HJH9171861.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=O5C65_001729;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=HJH9171861.1;transl_table=11 DALFDA020000010.1 cmsearch sequence_feature 61850 61970 . - . ID=id-DALFDA020000010.1:61850..61970;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 DALFDA020000010.1 tpg gene 61906 61971 . - . ID=gene-O5C65_001730;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=O5C65_001730 DALFDA020000010.1 Protein Homology CDS 61906 61971 . - 0 ID=cds-HJH9171862.1;Parent=gene-O5C65_001730;Dbxref=NCBI_GP:HJH9171862.1;Name=HJH9171862.1;Ontology_term=GO:0009088,GO:0031554,GO:0031556;gbkey=CDS;gene=thrL;go_process=threonine biosynthetic process|0009088||IEA,regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459006.1;locus_tag=O5C65_001730;product=thr operon leader peptide;protein_id=HJH9171862.1;transl_table=11 DALFDA020000010.1 tpg gene 62185 62871 . - . ID=gene-O5C65_001731;Name=O5C65_001731;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001731 DALFDA020000010.1 Protein Homology CDS 62185 62871 . - 0 ID=cds-HJH9171863.1;Parent=gene-O5C65_001731;Dbxref=NCBI_GP:HJH9171863.1;Name=HJH9171863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463456.1;locus_tag=O5C65_001731;product=tRNA/rRNA methyltransferase;protein_id=HJH9171863.1;transl_table=11 DALFDA020000010.1 tpg gene 63271 63411 . - . ID=gene-O5C65_001732;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=O5C65_001732 DALFDA020000010.1 Protein Homology CDS 63271 63411 . - 0 ID=cds-HJH9171864.1;Parent=gene-O5C65_001732;Dbxref=NCBI_GP:HJH9171864.1;Name=HJH9171864.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463455.1;locus_tag=O5C65_001732;product=protein YjjY;protein_id=HJH9171864.1;transl_table=11 DALFDA020000010.1 tpg gene 63507 64223 . + . ID=gene-O5C65_001733;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=O5C65_001733 DALFDA020000010.1 Protein Homology CDS 63507 64223 . + 0 ID=cds-HJH9171865.1;Parent=gene-O5C65_001733;Dbxref=NCBI_GP:HJH9171865.1;Name=HJH9171865.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=O5C65_001733;product=two-component system response regulator ArcA;protein_id=HJH9171865.1;transl_table=11 DALFDA020000010.1 tpg gene 64490 64804 . + . ID=gene-O5C65_001734;Name=O5C65_001734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001734 DALFDA020000010.1 Protein Homology CDS 64490 64804 . + 0 ID=cds-HJH9171866.1;Parent=gene-O5C65_001734;Dbxref=NCBI_GP:HJH9171866.1;Name=HJH9171866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463453.1;locus_tag=O5C65_001734;product=hypothetical protein;protein_id=HJH9171866.1;transl_table=11 DALFDA020000010.1 tpg gene 65187 65858 . + . ID=gene-O5C65_001735;Name=O5C65_001735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001735 DALFDA020000010.1 Protein Homology CDS 65187 65858 . + 0 ID=cds-HJH9171867.1;Parent=gene-O5C65_001735;Dbxref=NCBI_GP:HJH9171867.1;Name=HJH9171867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463452.1;locus_tag=O5C65_001735;product=helix-turn-helix domain-containing protein;protein_id=HJH9171867.1;transl_table=11 DALFDA020000010.1 tpg gene 66197 66742 . + . ID=gene-O5C65_001736;Name=O5C65_001736;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001736 DALFDA020000010.1 Protein Homology CDS 66197 66742 . + 0 ID=cds-HJH9171868.1;Parent=gene-O5C65_001736;Dbxref=NCBI_GP:HJH9171868.1;Name=HJH9171868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463451.1;locus_tag=O5C65_001736;product=fimbrial protein;protein_id=HJH9171868.1;transl_table=11 DALFDA020000010.1 tpg gene 66813 67496 . + . ID=gene-O5C65_001737;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=O5C65_001737 DALFDA020000010.1 Protein Homology CDS 66813 67496 . + 0 ID=cds-HJH9171869.1;Parent=gene-O5C65_001737;Dbxref=NCBI_GP:HJH9171869.1;Name=HJH9171869.1;gbkey=CDS;gene=sthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463450.1;locus_tag=O5C65_001737;product=fimbrial biogenesis chaperone SthA;protein_id=HJH9171869.1;transl_table=11 DALFDA020000010.1 tpg gene 67542 70079 . + . ID=gene-O5C65_001738;Name=O5C65_001738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001738 DALFDA020000010.1 Protein Homology CDS 67542 70079 . + 0 ID=cds-HJH9171870.1;Parent=gene-O5C65_001738;Dbxref=NCBI_GP:HJH9171870.1;Name=HJH9171870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463449.1;locus_tag=O5C65_001738;product=fimbrial outer membrane usher protein;protein_id=HJH9171870.1;transl_table=11 DALFDA020000010.1 tpg gene 70097 70654 . + . ID=gene-O5C65_001739;Name=O5C65_001739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001739 DALFDA020000010.1 Protein Homology CDS 70097 70654 . + 0 ID=cds-HJH9171871.1;Parent=gene-O5C65_001739;Dbxref=NCBI_GP:HJH9171871.1;Name=HJH9171871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463448.1;locus_tag=O5C65_001739;product=fimbrial protein;protein_id=HJH9171871.1;transl_table=11 DALFDA020000010.1 tpg gene 70695 71780 . + . ID=gene-O5C65_001740;Name=sthE;gbkey=Gene;gene=sthE;gene_biotype=protein_coding;locus_tag=O5C65_001740 DALFDA020000010.1 Protein Homology CDS 70695 71780 . + 0 ID=cds-HJH9171872.1;Parent=gene-O5C65_001740;Dbxref=NCBI_GP:HJH9171872.1;Name=HJH9171872.1;gbkey=CDS;gene=sthE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463447.1;locus_tag=O5C65_001740;product=fimbrial major subunit SthE;protein_id=HJH9171872.1;transl_table=11 DALFDA020000010.1 tpg gene 71838 73187 . - . ID=gene-O5C65_001741;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=O5C65_001741 DALFDA020000010.1 Protein Homology CDS 71838 73187 . - 0 ID=cds-HJH9171873.1;Parent=gene-O5C65_001741;Dbxref=NCBI_GP:HJH9171873.1;Name=HJH9171873.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463446.1;locus_tag=O5C65_001741;product=cell envelope integrity protein CreD;protein_id=HJH9171873.1;transl_table=11 DALFDA020000010.1 tpg gene 73245 74669 . - . ID=gene-O5C65_001742;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=O5C65_001742 DALFDA020000010.1 Protein Homology CDS 73245 74669 . - 0 ID=cds-HJH9171874.1;Parent=gene-O5C65_001742;Dbxref=NCBI_GP:HJH9171874.1;Name=HJH9171874.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463445.1;locus_tag=O5C65_001742;product=two-component system sensor histidine kinase CreC;protein_id=HJH9171874.1;transl_table=11 DALFDA020000010.1 tpg gene 74669 75358 . - . ID=gene-O5C65_001743;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=O5C65_001743 DALFDA020000010.1 Protein Homology CDS 74669 75358 . - 0 ID=cds-HJH9171875.1;Parent=gene-O5C65_001743;Dbxref=NCBI_GP:HJH9171875.1;Name=HJH9171875.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463444.1;locus_tag=O5C65_001743;product=two-component system response regulator CreB;protein_id=HJH9171875.1;transl_table=11 DALFDA020000010.1 tpg gene 75371 75844 . - . ID=gene-O5C65_001744;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=O5C65_001744 DALFDA020000010.1 Protein Homology CDS 75371 75844 . - 0 ID=cds-HJH9171876.1;Parent=gene-O5C65_001744;Dbxref=NCBI_GP:HJH9171876.1;Name=HJH9171876.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463443.1;locus_tag=O5C65_001744;product=protein CreA;protein_id=HJH9171876.1;transl_table=11 DALFDA020000010.1 tpg gene 76056 76925 . + . ID=gene-O5C65_001745;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=O5C65_001745 DALFDA020000010.1 Protein Homology CDS 76056 76925 . + 0 ID=cds-HJH9171877.1;Parent=gene-O5C65_001745;Dbxref=NCBI_GP:HJH9171877.1;Name=HJH9171877.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463442.1;locus_tag=O5C65_001745;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=HJH9171877.1;transl_table=11 DALFDA020000010.1 tpg gene 76922 77569 . - . ID=gene-O5C65_001746;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=O5C65_001746 DALFDA020000010.1 Protein Homology CDS 76922 77569 . - 0 ID=cds-HJH9171878.1;Parent=gene-O5C65_001746;Dbxref=NCBI_GP:HJH9171878.1;Name=HJH9171878.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463441.1;locus_tag=O5C65_001746;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=HJH9171878.1;transl_table=11 DALFDA020000010.1 tpg gene 77618 78133 . + . ID=gene-O5C65_001747;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=O5C65_001747 DALFDA020000010.1 Protein Homology CDS 77618 78133 . + 0 ID=cds-HJH9171879.1;Parent=gene-O5C65_001747;Dbxref=NCBI_GP:HJH9171879.1;Name=HJH9171879.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463440.1;locus_tag=O5C65_001747;product=inosine/xanthosine triphosphatase;protein_id=HJH9171879.1;transl_table=11 DALFDA020000010.1 tpg gene 78235 78561 . - . ID=gene-O5C65_001748;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=O5C65_001748 DALFDA020000010.1 Protein Homology CDS 78235 78561 . - 0 ID=cds-HJH9171880.1;Parent=gene-O5C65_001748;Dbxref=NCBI_GP:HJH9171880.1;Name=HJH9171880.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463439.1;locus_tag=O5C65_001748;product=trp operon repressor;protein_id=HJH9171880.1;transl_table=11 DALFDA020000010.1 tpg gene 78619 80556 . - . ID=gene-O5C65_001749;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=O5C65_001749 DALFDA020000010.1 Protein Homology CDS 78619 80556 . - 0 ID=cds-HJH9171881.1;Parent=gene-O5C65_001749;Dbxref=NCBI_GP:HJH9171881.1;Name=HJH9171881.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155637.1;locus_tag=O5C65_001749;product=murein transglycosylase;protein_id=HJH9171881.1;transl_table=11 DALFDA020000010.1 tpg gene 80765 82432 . + . ID=gene-O5C65_001750;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=O5C65_001750 DALFDA020000010.1 Protein Homology CDS 80765 82432 . + 0 ID=cds-HJH9171882.1;Parent=gene-O5C65_001750;Dbxref=NCBI_GP:HJH9171882.1;Name=HJH9171882.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=O5C65_001750;product=energy-dependent translational throttle protein EttA;protein_id=HJH9171882.1;transl_table=11 DALFDA020000010.1 tpg gene 82550 83782 . - . ID=gene-O5C65_001751;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=O5C65_001751 DALFDA020000010.1 Protein Homology CDS 82550 83782 . - 0 ID=cds-HJH9171883.1;Parent=gene-O5C65_001751;Dbxref=NCBI_GP:HJH9171883.1;Name=HJH9171883.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463436.5;locus_tag=O5C65_001751;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=HJH9171883.1;transl_table=11 DALFDA020000010.1 tpg gene 83933 85315 . - . ID=gene-O5C65_001752;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=O5C65_001752 DALFDA020000010.1 Protein Homology CDS 83933 85315 . - 0 ID=cds-HJH9171884.1;Parent=gene-O5C65_001752;Dbxref=NCBI_GP:HJH9171884.1;Name=HJH9171884.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=O5C65_001752;product=DNA repair protein RadA;protein_id=HJH9171884.1;transl_table=11 DALFDA020000010.1 tpg gene 85399 86367 . - . ID=gene-O5C65_001753;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=O5C65_001753 DALFDA020000010.1 Protein Homology CDS 85399 86367 . - 0 ID=cds-HJH9171885.1;Parent=gene-O5C65_001753;Dbxref=NCBI_GP:HJH9171885.1;Name=HJH9171885.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463434.1;locus_tag=O5C65_001753;product=phosphoserine phosphatase;protein_id=HJH9171885.1;transl_table=11 DALFDA020000010.1 tpg gene 86484 87128 . + . ID=gene-O5C65_001754;Name=O5C65_001754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001754 DALFDA020000010.1 Protein Homology CDS 86484 87128 . + 0 ID=cds-HJH9171886.1;Parent=gene-O5C65_001754;Dbxref=NCBI_GP:HJH9171886.1;Name=HJH9171886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463433.2;locus_tag=O5C65_001754;product=YtjB family periplasmic protein;protein_id=HJH9171886.1;transl_table=11 DALFDA020000010.1 tpg gene 87162 88178 . + . ID=gene-O5C65_001755;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=O5C65_001755 DALFDA020000010.1 Protein Homology CDS 87162 88178 . + 0 ID=cds-HJH9171887.1;Parent=gene-O5C65_001755;Dbxref=NCBI_GP:HJH9171887.1;Name=HJH9171887.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463432.1;locus_tag=O5C65_001755;product=lipoate--protein ligase LplA;protein_id=HJH9171887.1;transl_table=11 DALFDA020000010.1 tpg gene 88183 89511 . - . ID=gene-O5C65_001756;Name=yjjJ;gbkey=Gene;gene=yjjJ;gene_biotype=protein_coding;locus_tag=O5C65_001756 DALFDA020000010.1 Protein Homology CDS 88183 89511 . - 0 ID=cds-HJH9171888.1;Parent=gene-O5C65_001756;Dbxref=NCBI_GP:HJH9171888.1;Name=HJH9171888.1;gbkey=CDS;gene=yjjJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747246.1;locus_tag=O5C65_001756;product=type II toxin-antitoxin system HipA family toxin YjjJ;protein_id=HJH9171888.1;transl_table=11 DALFDA020000010.1 tpg gene 89690 90409 . - . ID=gene-O5C65_001757;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=O5C65_001757 DALFDA020000010.1 Protein Homology CDS 89690 90409 . - 0 ID=cds-HJH9171889.1;Parent=gene-O5C65_001757;Dbxref=NCBI_GP:HJH9171889.1;Name=HJH9171889.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463426.1;locus_tag=O5C65_001757;product=purine-nucleoside phosphorylase;protein_id=HJH9171889.1;transl_table=11 DALFDA020000010.1 tpg gene 90522 91745 . - . ID=gene-O5C65_001758;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=O5C65_001758 DALFDA020000010.1 Protein Homology CDS 90522 91745 . - 0 ID=cds-HJH9171890.1;Parent=gene-O5C65_001758;Dbxref=NCBI_GP:HJH9171890.1;Name=HJH9171890.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463425.1;locus_tag=O5C65_001758;product=phosphopentomutase;protein_id=HJH9171890.1;transl_table=11 DALFDA020000010.1 tpg gene 91797 93119 . - . ID=gene-O5C65_001759;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=O5C65_001759 DALFDA020000010.1 Protein Homology CDS 91797 93119 . - 0 ID=cds-HJH9171891.1;Parent=gene-O5C65_001759;Dbxref=NCBI_GP:HJH9171891.1;Name=HJH9171891.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=O5C65_001759;product=thymidine phosphorylase;protein_id=HJH9171891.1;transl_table=11 DALFDA020000010.1 tpg gene 93243 94022 . - . ID=gene-O5C65_001760;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=O5C65_001760 DALFDA020000010.1 Protein Homology CDS 93243 94022 . - 0 ID=cds-HJH9171892.1;Parent=gene-O5C65_001760;Dbxref=NCBI_GP:HJH9171892.1;Name=HJH9171892.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=O5C65_001760;product=deoxyribose-phosphate aldolase;protein_id=HJH9171892.1;transl_table=11 DALFDA020000010.1 tpg gene 94282 95832 . + . ID=gene-O5C65_001761;Name=O5C65_001761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001761 DALFDA020000010.1 Protein Homology CDS 94282 95832 . + 0 ID=cds-HJH9171893.1;Parent=gene-O5C65_001761;Dbxref=NCBI_GP:HJH9171893.1;Name=HJH9171893.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463422.1;locus_tag=O5C65_001761;product=YjjI family glycine radical enzyme;protein_id=HJH9171893.1;transl_table=11 DALFDA020000010.1 tpg gene 95804 96667 . + . ID=gene-O5C65_001762;Name=O5C65_001762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001762 DALFDA020000010.1 Protein Homology CDS 95804 96667 . + 0 ID=cds-HJH9171894.1;Parent=gene-O5C65_001762;Dbxref=NCBI_GP:HJH9171894.1;Name=HJH9171894.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463421.1;locus_tag=O5C65_001762;product=YjjW family glycine radical enzyme activase;protein_id=HJH9171894.1;transl_table=11 DALFDA020000010.1 tpg gene 96700 97473 . - . ID=gene-O5C65_001763;Name=O5C65_001763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001763 DALFDA020000010.1 Protein Homology CDS 96700 97473 . - 0 ID=cds-HJH9171895.1;Parent=gene-O5C65_001763;Dbxref=NCBI_GP:HJH9171895.1;Name=HJH9171895.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463420.1;locus_tag=O5C65_001763;product=metal-dependent hydrolase;protein_id=HJH9171895.1;transl_table=11 DALFDA020000010.1 tpg gene 97470 98543 . - . ID=gene-O5C65_001764;Name=O5C65_001764;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001764 DALFDA020000010.1 Protein Homology CDS 97470 98543 . - 0 ID=cds-HJH9171896.1;Parent=gene-O5C65_001764;Dbxref=NCBI_GP:HJH9171896.1;Name=HJH9171896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463419.1;locus_tag=O5C65_001764;product=patatin-like phospholipase family protein;protein_id=HJH9171896.1;transl_table=11 DALFDA020000010.1 tpg gene 98667 98828 . - . ID=gene-O5C65_001765;Name=O5C65_001765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001765 DALFDA020000010.1 Protein Homology CDS 98667 98828 . - 0 ID=cds-HJH9171897.1;Parent=gene-O5C65_001765;Dbxref=NCBI_GP:HJH9171897.1;Name=HJH9171897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=O5C65_001765;product=DUF1328 domain-containing protein;protein_id=HJH9171897.1;transl_table=11 DALFDA020000010.1 tpg gene 98957 99574 . - . ID=gene-O5C65_001766;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=O5C65_001766 DALFDA020000010.1 Protein Homology CDS 98957 99574 . - 0 ID=cds-HJH9171898.1;Parent=gene-O5C65_001766;Dbxref=NCBI_GP:HJH9171898.1;Name=HJH9171898.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463417.1;locus_tag=O5C65_001766;product=molecular chaperone OsmY;protein_id=HJH9171898.1;transl_table=11 DALFDA020000010.1 tpg gene 99976 101565 . - . ID=gene-O5C65_001767;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=O5C65_001767 DALFDA020000010.1 Protein Homology CDS 99976 101565 . - 0 ID=cds-HJH9171899.1;Parent=gene-O5C65_001767;Dbxref=NCBI_GP:HJH9171899.1;Name=HJH9171899.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=O5C65_001767;product=peptide chain release factor 3;protein_id=HJH9171899.1;transl_table=11 DALFDA020000010.1 tpg gene 101657 102334 . - . ID=gene-O5C65_001768;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=O5C65_001768 DALFDA020000010.1 Protein Homology CDS 101657 102334 . - 0 ID=cds-HJH9171900.1;Parent=gene-O5C65_001768;Dbxref=NCBI_GP:HJH9171900.1;Name=HJH9171900.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=O5C65_001768;product=pyrimidine 5'-nucleotidase;protein_id=HJH9171900.1;transl_table=11 DALFDA020000010.1 tpg gene 102356 102802 . - . ID=gene-O5C65_001769;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=O5C65_001769 DALFDA020000010.1 Protein Homology CDS 102356 102802 . - 0 ID=cds-HJH9171901.1;Parent=gene-O5C65_001769;Dbxref=NCBI_GP:HJH9171901.1;Name=HJH9171901.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463414.1;locus_tag=O5C65_001769;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=HJH9171901.1;transl_table=11 DALFDA020000010.1 tpg gene 102747 103184 . - . ID=gene-O5C65_001770;Name=O5C65_001770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001770 DALFDA020000010.1 Protein Homology CDS 102747 103184 . - 0 ID=cds-HJH9171902.1;Parent=gene-O5C65_001770;Dbxref=NCBI_GP:HJH9171902.1;Name=HJH9171902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463413.1;locus_tag=O5C65_001770;product=DNA polymerase III subunit psi;protein_id=HJH9171902.1;transl_table=11 DALFDA020000010.1 tpg gene 103287 104315 . + . ID=gene-O5C65_001771;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=O5C65_001771 DALFDA020000010.1 Protein Homology CDS 103287 104315 . + 0 ID=cds-HJH9171903.1;Parent=gene-O5C65_001771;Dbxref=NCBI_GP:HJH9171903.1;Name=HJH9171903.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463412.1;locus_tag=O5C65_001771;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=HJH9171903.1;transl_table=11 DALFDA020000010.1 tpg gene 104506 104592 . + . ID=gene-O5C65_001772;Name=O5C65_001772;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_001772 DALFDA020000010.1 tRNAscan-SE tRNA 104506 104592 . + . ID=rna-O5C65_001772;Parent=gene-O5C65_001772;anticodon=(pos:104540..104542);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_001772;product=tRNA-Leu DALFDA020000010.1 tRNAscan-SE exon 104506 104592 . + . ID=exon-O5C65_001772-1;Parent=rna-O5C65_001772;anticodon=(pos:104540..104542);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_001772;product=tRNA-Leu DALFDA020000010.1 tpg gene 104620 104706 . + . ID=gene-O5C65_001773;Name=O5C65_001773;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_001773 DALFDA020000010.1 tRNAscan-SE tRNA 104620 104706 . + . ID=rna-O5C65_001773;Parent=gene-O5C65_001773;anticodon=(pos:104654..104656);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_001773;product=tRNA-Leu DALFDA020000010.1 tRNAscan-SE exon 104620 104706 . + . ID=exon-O5C65_001773-1;Parent=rna-O5C65_001773;anticodon=(pos:104654..104656);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_001773;product=tRNA-Leu DALFDA020000010.1 tpg gene 104738 104824 . + . ID=gene-O5C65_001774;Name=O5C65_001774;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_001774 DALFDA020000010.1 tRNAscan-SE tRNA 104738 104824 . + . ID=rna-O5C65_001774;Parent=gene-O5C65_001774;anticodon=(pos:104772..104774);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_001774;product=tRNA-Leu DALFDA020000010.1 tRNAscan-SE exon 104738 104824 . + . ID=exon-O5C65_001774-1;Parent=rna-O5C65_001774;anticodon=(pos:104772..104774);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_001774;product=tRNA-Leu DALFDA020000010.1 tpg gene 104856 105092 . - . ID=gene-O5C65_001775;Name=O5C65_001775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001775 DALFDA020000010.1 Protein Homology CDS 104856 105092 . - 0 ID=cds-HJH9171904.1;Parent=gene-O5C65_001775;Dbxref=NCBI_GP:HJH9171904.1;Name=HJH9171904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463411.1;locus_tag=O5C65_001775;product=DUF1435 domain-containing protein;protein_id=HJH9171904.1;transl_table=11 DALFDA020000010.1 tpg gene 105343 106407 . + . ID=gene-O5C65_001776;Name=O5C65_001776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001776 DALFDA020000010.1 Protein Homology CDS 105343 106407 . + 0 ID=cds-HJH9171905.1;Parent=gene-O5C65_001776;Dbxref=NCBI_GP:HJH9171905.1;Name=HJH9171905.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463410.1;locus_tag=O5C65_001776;product=GGDEF domain-containing protein;protein_id=HJH9171905.1;transl_table=11 DALFDA020000010.1 tpg gene 106528 107316 . + . ID=gene-O5C65_001777;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=O5C65_001777 DALFDA020000010.1 Protein Homology CDS 106528 107316 . + 0 ID=cds-HJH9171906.1;Parent=gene-O5C65_001777;Dbxref=NCBI_GP:HJH9171906.1;Name=HJH9171906.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463409.1;locus_tag=O5C65_001777;product=siderophore-iron reductase FhuF;protein_id=HJH9171906.1;transl_table=11 DALFDA020000010.1 tpg gene 107467 107925 . + . ID=gene-O5C65_001778;Name=O5C65_001778;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001778 DALFDA020000010.1 Protein Homology CDS 107467 107925 . + 0 ID=cds-HJH9171907.1;Parent=gene-O5C65_001778;Dbxref=NCBI_GP:HJH9171907.1;Name=HJH9171907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463408.1;locus_tag=O5C65_001778;product=YbaK/EbsC family protein;protein_id=HJH9171907.1;transl_table=11 DALFDA020000010.1 tpg gene 107976 108650 . - . ID=gene-O5C65_001779;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=O5C65_001779 DALFDA020000010.1 Protein Homology CDS 107976 108650 . - 0 ID=cds-HJH9171908.1;Parent=gene-O5C65_001779;Dbxref=NCBI_GP:HJH9171908.1;Name=HJH9171908.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463407.3;locus_tag=O5C65_001779;product=DNA-binding transcriptional activator BglJ;protein_id=HJH9171908.1;transl_table=11 DALFDA020000010.1 tpg gene 108611 109336 . - . ID=gene-O5C65_001780;Name=O5C65_001780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001780 DALFDA020000010.1 Protein Homology CDS 108611 109336 . - 0 ID=cds-HJH9171909.1;Parent=gene-O5C65_001780;Dbxref=NCBI_GP:HJH9171909.1;Name=HJH9171909.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463406.1;locus_tag=O5C65_001780;product=helix-turn-helix transcriptional regulator;protein_id=HJH9171909.1;transl_table=11 DALFDA020000010.1 tpg gene 110049 110825 . + . ID=gene-O5C65_001781;Name=O5C65_001781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001781 DALFDA020000010.1 Protein Homology CDS 110049 110825 . + 0 ID=cds-HJH9171910.1;Parent=gene-O5C65_001781;Dbxref=NCBI_GP:HJH9171910.1;Name=HJH9171910.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=O5C65_001781;product=threonine/serine ThrE exporter family protein;protein_id=HJH9171910.1;transl_table=11 DALFDA020000010.1 tpg gene 110816 111289 . + . ID=gene-O5C65_001782;Name=O5C65_001782;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001782 DALFDA020000010.1 Protein Homology CDS 110816 111289 . + 0 ID=cds-HJH9171911.1;Parent=gene-O5C65_001782;Dbxref=NCBI_GP:HJH9171911.1;Name=HJH9171911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463404.1;locus_tag=O5C65_001782;product=threonine/serine exporter;protein_id=HJH9171911.1;transl_table=11 DALFDA020000010.1 tpg gene 111382 111921 . + . ID=gene-O5C65_001783;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=O5C65_001783 DALFDA020000010.1 Protein Homology CDS 111382 111921 . + 0 ID=cds-HJH9171912.1;Parent=gene-O5C65_001783;Dbxref=NCBI_GP:HJH9171912.1;Name=HJH9171912.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463403.1;locus_tag=O5C65_001783;product=primosomal protein DnaT;protein_id=HJH9171912.1;transl_table=11 DALFDA020000010.1 tpg gene 111924 112661 . + . ID=gene-O5C65_001784;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=O5C65_001784 DALFDA020000010.1 Protein Homology CDS 111924 112661 . + 0 ID=cds-HJH9171913.1;Parent=gene-O5C65_001784;Dbxref=NCBI_GP:HJH9171913.1;Name=HJH9171913.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463402.1;locus_tag=O5C65_001784;product=DNA replication protein DnaC;protein_id=HJH9171913.1;transl_table=11 DALFDA020000010.1 tpg gene 112719 113180 . + . ID=gene-O5C65_001785;Name=O5C65_001785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001785 DALFDA020000010.1 Protein Homology CDS 112719 113180 . + 0 ID=cds-HJH9171914.1;Parent=gene-O5C65_001785;Dbxref=NCBI_GP:HJH9171914.1;Name=HJH9171914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463401.1;locus_tag=O5C65_001785;product=DUF2501 domain-containing protein;protein_id=HJH9171914.1;transl_table=11 DALFDA020000010.1 tpg gene 113463 115754 . + . ID=gene-O5C65_001786;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=O5C65_001786 DALFDA020000010.1 Protein Homology CDS 113463 115754 . + 0 ID=cds-HJH9171915.1;Parent=gene-O5C65_001786;Dbxref=NCBI_GP:HJH9171915.1;Name=HJH9171915.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418779.2;locus_tag=O5C65_001786;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=HJH9171915.1;transl_table=11 DALFDA020000010.1 tpg gene 115888 116898 . - . ID=gene-O5C65_001787;Name=O5C65_001787;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001787 DALFDA020000010.1 Protein Homology CDS 115888 116898 . - 0 ID=cds-HJH9171916.1;Parent=gene-O5C65_001787;Dbxref=NCBI_GP:HJH9171916.1;Name=HJH9171916.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224961.1;locus_tag=O5C65_001787;product=SIS domain-containing protein;protein_id=HJH9171916.1;transl_table=11 DALFDA020000010.1 tpg gene 116916 117977 . - . ID=gene-O5C65_001788;Name=O5C65_001788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001788 DALFDA020000010.1 Protein Homology CDS 116916 117977 . - 0 ID=cds-HJH9171917.1;Parent=gene-O5C65_001788;Dbxref=NCBI_GP:HJH9171917.1;Name=HJH9171917.1;Ontology_term=GO:0005975,GO:0016787,GO:0097367;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463398.1;locus_tag=O5C65_001788;product=SIS domain-containing protein;protein_id=HJH9171917.1;transl_table=11 DALFDA020000010.1 tpg gene 117990 118838 . - . ID=gene-O5C65_001789;Name=O5C65_001789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001789 DALFDA020000010.1 Protein Homology CDS 117990 118838 . - 0 ID=cds-HJH9171918.1;Parent=gene-O5C65_001789;Dbxref=NCBI_GP:HJH9171918.1;Name=HJH9171918.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224959.1;locus_tag=O5C65_001789;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=HJH9171918.1;transl_table=11 DALFDA020000010.1 tpg gene 118816 119595 . - . ID=gene-O5C65_001790;Name=O5C65_001790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001790 DALFDA020000010.1 Protein Homology CDS 118816 119595 . - 0 ID=cds-HJH9171919.1;Parent=gene-O5C65_001790;Dbxref=NCBI_GP:HJH9171919.1;Name=HJH9171919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463396.1;locus_tag=O5C65_001790;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=HJH9171919.1;transl_table=11 DALFDA020000010.1 tpg gene 119621 120082 . - . ID=gene-O5C65_001791;Name=O5C65_001791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001791 DALFDA020000010.1 Protein Homology CDS 119621 120082 . - 0 ID=cds-HJH9171920.1;Parent=gene-O5C65_001791;Dbxref=NCBI_GP:HJH9171920.1;Name=HJH9171920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463395.1;locus_tag=O5C65_001791;product=PTS sugar transporter subunit IIB;protein_id=HJH9171920.1;transl_table=11 DALFDA020000010.1 tpg gene 120097 120519 . - . ID=gene-O5C65_001792;Name=O5C65_001792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001792 DALFDA020000010.1 Protein Homology CDS 120097 120519 . - 0 ID=cds-HJH9171921.1;Parent=gene-O5C65_001792;Dbxref=NCBI_GP:HJH9171921.1;Name=HJH9171921.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463394.1;locus_tag=O5C65_001792;product=PTS sugar transporter subunit IIA;protein_id=HJH9171921.1;transl_table=11 DALFDA020000010.1 tpg gene 120621 123386 . - . ID=gene-O5C65_001793;Name=O5C65_001793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001793 DALFDA020000010.1 Protein Homology CDS 120621 123386 . - 0 ID=cds-HJH9171922.1;Parent=gene-O5C65_001793;Dbxref=NCBI_GP:HJH9171922.1;Name=HJH9171922.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463393.1;locus_tag=O5C65_001793;product=sigma 54-interacting transcriptional regulator;protein_id=HJH9171922.1;transl_table=11 DALFDA020000010.1 tpg pseudogene 123523 123597 . + . ID=gene-O5C65_001794;Name=O5C65_001794;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_001794;pseudo=true DALFDA020000010.1 Protein Homology CDS 123523 123597 . + 0 ID=cds-O5C65_001794;Parent=gene-O5C65_001794;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012134222.1;locus_tag=O5C65_001794;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 DALFDA020000010.1 tpg gene 123710 125371 . - . ID=gene-O5C65_001795;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=O5C65_001795 DALFDA020000010.1 Protein Homology CDS 123710 125371 . - 0 ID=cds-HJH9171923.1;Parent=gene-O5C65_001795;Dbxref=NCBI_GP:HJH9171923.1;Name=HJH9171923.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463392.1;locus_tag=O5C65_001795;product=methyl-accepting chemotaxis protein;protein_id=HJH9171923.1;transl_table=11 DALFDA020000010.1 tpg gene 125738 127888 . + . ID=gene-O5C65_001796;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=O5C65_001796 DALFDA020000010.1 Protein Homology CDS 125738 127888 . + 0 ID=cds-HJH9171924.1;Parent=gene-O5C65_001796;Dbxref=NCBI_GP:HJH9171924.1;Name=HJH9171924.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463391.1;locus_tag=O5C65_001796;product=pyruvate/proton symporter BtsT;protein_id=HJH9171924.1;transl_table=11 DALFDA020000010.1 tpg gene 127983 128186 . + . ID=gene-O5C65_001797;Name=O5C65_001797;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001797 DALFDA020000010.1 Protein Homology CDS 127983 128186 . + 0 ID=cds-HJH9171925.1;Parent=gene-O5C65_001797;Dbxref=NCBI_GP:HJH9171925.1;Name=HJH9171925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463390.1;locus_tag=O5C65_001797;product=YbdD/YjiX family protein;protein_id=HJH9171925.1;transl_table=11 DALFDA020000010.1 tpg gene 128197 129153 . + . ID=gene-O5C65_001798;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=O5C65_001798 DALFDA020000010.1 Protein Homology CDS 128197 129153 . + 0 ID=cds-HJH9171926.1;Parent=gene-O5C65_001798;Dbxref=NCBI_GP:HJH9171926.1;Name=HJH9171926.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463389.1;locus_tag=O5C65_001798;product=GTPase;protein_id=HJH9171926.1;transl_table=11 DALFDA020000010.1 tpg gene 129228 129530 . - . ID=gene-O5C65_001799;Name=O5C65_001799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001799 DALFDA020000010.1 Protein Homology CDS 129228 129530 . - 0 ID=cds-HJH9171927.1;Parent=gene-O5C65_001799;Dbxref=NCBI_GP:HJH9171927.1;Name=HJH9171927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463388.1;locus_tag=O5C65_001799;product=BrnA antitoxin family protein;protein_id=HJH9171927.1;transl_table=11 DALFDA020000010.1 tpg gene 129517 129804 . - . ID=gene-O5C65_001800;Name=O5C65_001800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001800 DALFDA020000010.1 Protein Homology CDS 129517 129804 . - 0 ID=cds-HJH9171928.1;Parent=gene-O5C65_001800;Dbxref=NCBI_GP:HJH9171928.1;Name=HJH9171928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463387.1;locus_tag=O5C65_001800;product=BrnT family toxin;protein_id=HJH9171928.1;transl_table=11 DALFDA020000010.1 tpg gene 130073 130987 . - . ID=gene-O5C65_001801;Name=O5C65_001801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001801 DALFDA020000010.1 Protein Homology CDS 130073 130987 . - 0 ID=cds-HJH9171929.1;Parent=gene-O5C65_001801;Dbxref=NCBI_GP:HJH9171929.1;Name=HJH9171929.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463386.1;locus_tag=O5C65_001801;product=restriction endonuclease;protein_id=HJH9171929.1;transl_table=11 DALFDA020000010.1 tpg gene 131185 134694 . + . ID=gene-O5C65_001802;Name=hsdR;gbkey=Gene;gene=hsdR;gene_biotype=protein_coding;locus_tag=O5C65_001802 DALFDA020000010.1 Protein Homology CDS 131185 134694 . + 0 ID=cds-HJH9171930.1;Parent=gene-O5C65_001802;Dbxref=NCBI_GP:HJH9171930.1;Name=HJH9171930.1;gbkey=CDS;gene=hsdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463385.1;locus_tag=O5C65_001802;product=type I restriction-modification system endonuclease;protein_id=HJH9171930.1;transl_table=11 DALFDA020000010.1 tpg gene 134888 136477 . + . ID=gene-O5C65_001803;Name=O5C65_001803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001803 DALFDA020000010.1 Protein Homology CDS 134888 136477 . + 0 ID=cds-HJH9171931.1;Parent=gene-O5C65_001803;Dbxref=NCBI_GP:HJH9171931.1;Name=HJH9171931.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463384.1;locus_tag=O5C65_001803;product=N-6 DNA methylase;protein_id=HJH9171931.1;transl_table=11 DALFDA020000010.1 tpg gene 136474 137862 . + . ID=gene-O5C65_001804;Name=hsdS;gbkey=Gene;gene=hsdS;gene_biotype=protein_coding;locus_tag=O5C65_001804 DALFDA020000010.1 Protein Homology CDS 136474 137862 . + 0 ID=cds-HJH9171932.1;Parent=gene-O5C65_001804;Dbxref=NCBI_GP:HJH9171932.1;Name=HJH9171932.1;gbkey=CDS;gene=hsdS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505871.1;locus_tag=O5C65_001804;product=type I restriction-modification system specificity subunit;protein_id=HJH9171932.1;transl_table=11 DALFDA020000010.1 tpg pseudogene 138213 138407 . + . ID=gene-O5C65_001805;Name=O5C65_001805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_001805;pseudo=true DALFDA020000010.1 Protein Homology CDS 138213 138407 . + 0 ID=cds-O5C65_001805;Parent=gene-O5C65_001805;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463382.1;locus_tag=O5C65_001805;product=SymE family type I addiction module toxin;pseudo=true;transl_table=11 DALFDA020000010.1 tpg pseudogene 138499 139199 . + . ID=gene-O5C65_001806;Name=O5C65_001806;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_001806;pseudo=true DALFDA020000010.1 Protein Homology CDS 138499 139199 . + 0 ID=cds-O5C65_001806;Parent=gene-O5C65_001806;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463381.1;locus_tag=O5C65_001806;product=hypothetical protein;pseudo=true;transl_table=11 DALFDA020000010.1 tpg gene 139274 139438 . - . ID=gene-O5C65_001807;Name=yjiS;gbkey=Gene;gene=yjiS;gene_biotype=protein_coding;locus_tag=O5C65_001807 DALFDA020000010.1 Protein Homology CDS 139274 139438 . - 0 ID=cds-HJH9171933.1;Parent=gene-O5C65_001807;Dbxref=NCBI_GP:HJH9171933.1;Name=HJH9171933.1;gbkey=CDS;gene=yjiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463380.1;locus_tag=O5C65_001807;product=DUF1127 domain-containing protein YjiS;protein_id=HJH9171933.1;transl_table=11 DALFDA020000010.1 tpg gene 139405 139548 . + . ID=gene-O5C65_001808;Name=O5C65_001808;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001808 DALFDA020000010.1 Protein Homology CDS 139405 139548 . + 0 ID=cds-HJH9171934.1;Parent=gene-O5C65_001808;Dbxref=NCBI_GP:HJH9171934.1;Name=HJH9171934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463379.1;locus_tag=O5C65_001808;product=hypothetical protein;protein_id=HJH9171934.1;transl_table=11 DALFDA020000010.1 tpg gene 139643 141013 . - . ID=gene-O5C65_001809;Name=O5C65_001809;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001809 DALFDA020000010.1 Protein Homology CDS 139643 141013 . - 0 ID=cds-HJH9171935.1;Parent=gene-O5C65_001809;Dbxref=NCBI_GP:HJH9171935.1;Name=HJH9171935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463378.1;locus_tag=O5C65_001809;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=HJH9171935.1;transl_table=11 DALFDA020000010.1 tpg gene 141194 142159 . - . ID=gene-O5C65_001810;Name=O5C65_001810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001810 DALFDA020000010.1 Protein Homology CDS 141194 142159 . - 0 ID=cds-HJH9171936.1;Parent=gene-O5C65_001810;Dbxref=NCBI_GP:HJH9171936.1;Name=HJH9171936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000749539.1;locus_tag=O5C65_001810;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=HJH9171936.1;transl_table=11 DALFDA020000010.1 tpg gene 142638 143879 . + . ID=gene-O5C65_001811;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=O5C65_001811 DALFDA020000010.1 Protein Homology CDS 142638 143879 . + 0 ID=cds-HJH9171937.1;Parent=gene-O5C65_001811;Dbxref=NCBI_GP:HJH9171937.1;Name=HJH9171937.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463376.1;locus_tag=O5C65_001811;product=multidrug efflux MFS transporter MdtM;protein_id=HJH9171937.1;transl_table=11 DALFDA020000010.1 tpg gene 143966 145237 . + . ID=gene-O5C65_001812;Name=O5C65_001812;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001812 DALFDA020000010.1 Protein Homology CDS 143966 145237 . + 0 ID=cds-HJH9171938.1;Parent=gene-O5C65_001812;Dbxref=NCBI_GP:HJH9171938.1;Name=HJH9171938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463375.1;locus_tag=O5C65_001812;product=DUF445 domain-containing protein;protein_id=HJH9171938.1;transl_table=11 DALFDA020000010.1 tpg gene 145456 146640 . + . ID=gene-O5C65_001813;Name=O5C65_001813;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001813 DALFDA020000010.1 Protein Homology CDS 145456 146640 . + 0 ID=cds-HJH9171939.1;Parent=gene-O5C65_001813;Dbxref=NCBI_GP:HJH9171939.1;Name=HJH9171939.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463374.1;locus_tag=O5C65_001813;product=MFS transporter;protein_id=HJH9171939.1;transl_table=11 DALFDA020000010.1 tpg gene 147513 148184 . + . ID=gene-O5C65_001814;Name=O5C65_001814;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001814 DALFDA020000010.1 Protein Homology CDS 147513 148184 . + 0 ID=cds-HJH9171940.1;Parent=gene-O5C65_001814;Dbxref=NCBI_GP:HJH9171940.1;Name=HJH9171940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418750.2;locus_tag=O5C65_001814;product=nucleoside recognition domain-containing protein;protein_id=HJH9171940.1;transl_table=11 DALFDA020000010.1 tpg gene 148181 148642 . + . ID=gene-O5C65_001815;Name=O5C65_001815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001815 DALFDA020000010.1 Protein Homology CDS 148181 148642 . + 0 ID=cds-HJH9171941.1;Parent=gene-O5C65_001815;Dbxref=NCBI_GP:HJH9171941.1;Name=HJH9171941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463372.1;locus_tag=O5C65_001815;product=YjiG family protein;protein_id=HJH9171941.1;transl_table=11 DALFDA020000010.1 tpg gene 148655 149827 . + . ID=gene-O5C65_001816;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=O5C65_001816 DALFDA020000010.1 Protein Homology CDS 148655 149827 . + 0 ID=cds-HJH9171942.1;Parent=gene-O5C65_001816;Dbxref=NCBI_GP:HJH9171942.1;Name=HJH9171942.1;Ontology_term=GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463371.1;locus_tag=O5C65_001816;product=beta-aspartyl-peptidase;protein_id=HJH9171942.1;transl_table=11 DALFDA020000010.1 tpg gene 149946 150854 . + . ID=gene-O5C65_001817;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=O5C65_001817 DALFDA020000010.1 Protein Homology CDS 149946 150854 . + 0 ID=cds-HJH9171943.1;Parent=gene-O5C65_001817;Dbxref=NCBI_GP:HJH9171943.1;Name=HJH9171943.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463370.1;locus_tag=O5C65_001817;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=HJH9171943.1;transl_table=11 DALFDA020000010.1 tpg gene 150860 151594 . - . ID=gene-O5C65_001818;Name=O5C65_001818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001818 DALFDA020000010.1 Protein Homology CDS 150860 151594 . - 0 ID=cds-HJH9171944.1;Parent=gene-O5C65_001818;Dbxref=NCBI_GP:HJH9171944.1;Name=HJH9171944.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463369.1;locus_tag=O5C65_001818;product=aspartate/glutamate racemase family protein;protein_id=HJH9171944.1;transl_table=11 DALFDA020000010.1 tpg gene 151833 152363 . - . ID=gene-O5C65_001819;Name=O5C65_001819;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001819 DALFDA020000010.1 Protein Homology CDS 151833 152363 . - 0 ID=cds-HJH9171945.1;Parent=gene-O5C65_001819;Dbxref=NCBI_GP:HJH9171945.1;Name=HJH9171945.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463368.3;locus_tag=O5C65_001819;product=Hcp family type VI secretion system effector;protein_id=HJH9171945.1;transl_table=11 DALFDA020000010.1 tpg gene 153081 154094 . + . ID=gene-O5C65_001820;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=O5C65_001820 DALFDA020000010.1 Protein Homology CDS 153081 154094 . + 0 ID=cds-HJH9171946.1;Parent=gene-O5C65_001820;Dbxref=NCBI_GP:HJH9171946.1;Name=HJH9171946.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463367.1;locus_tag=O5C65_001820;product=tryptophan--tRNA ligase;protein_id=HJH9171946.1;transl_table=11 DALFDA020000010.1 tpg gene 154095 154868 . - . ID=gene-O5C65_001821;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=O5C65_001821 DALFDA020000010.1 Protein Homology CDS 154095 154868 . - 0 ID=cds-HJH9171947.1;Parent=gene-O5C65_001821;Dbxref=NCBI_GP:HJH9171947.1;Name=HJH9171947.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463366.1;locus_tag=O5C65_001821;product=Uxu operon transcriptional regulator;protein_id=HJH9171947.1;transl_table=11 DALFDA020000010.1 tpg gene 155218 155892 . + . ID=gene-O5C65_001822;Name=O5C65_001822;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001822 DALFDA020000010.1 Protein Homology CDS 155218 155892 . + 0 ID=cds-HJH9171948.1;Parent=gene-O5C65_001822;Dbxref=NCBI_GP:HJH9171948.1;Name=HJH9171948.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463365.1;locus_tag=O5C65_001822;product=dienelactone hydrolase family protein;protein_id=HJH9171948.1;transl_table=11 DALFDA020000010.1 tpg gene 155889 156350 . - . ID=gene-O5C65_001823;Name=O5C65_001823;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001823 DALFDA020000010.1 Protein Homology CDS 155889 156350 . - 0 ID=cds-HJH9171949.1;Parent=gene-O5C65_001823;Dbxref=NCBI_GP:HJH9171949.1;Name=HJH9171949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463364.1;locus_tag=O5C65_001823;product=DUF302 domain-containing protein;protein_id=HJH9171949.1;transl_table=11 DALFDA020000010.1 tpg gene 156555 157466 . - . ID=gene-O5C65_001824;Name=O5C65_001824;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001824 DALFDA020000010.1 Protein Homology CDS 156555 157466 . - 0 ID=cds-HJH9171950.1;Parent=gene-O5C65_001824;Dbxref=NCBI_GP:HJH9171950.1;Name=HJH9171950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463363.1;locus_tag=O5C65_001824;product=STM4504/CBY_0614 family protein;protein_id=HJH9171950.1;transl_table=11 DALFDA020000010.1 tpg gene 157820 158428 . - . ID=gene-O5C65_001825;Name=O5C65_001825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001825 DALFDA020000010.1 Protein Homology CDS 157820 158428 . - 0 ID=cds-HJH9171951.1;Parent=gene-O5C65_001825;Dbxref=NCBI_GP:HJH9171951.1;Name=HJH9171951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463361.1;locus_tag=O5C65_001825;product=DUF1062 domain-containing protein;protein_id=HJH9171951.1;transl_table=11 DALFDA020000010.1 tpg gene 158917 159174 . + . ID=gene-O5C65_001826;Name=O5C65_001826;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001826 DALFDA020000010.1 Protein Homology CDS 158917 159174 . + 0 ID=cds-HJH9171952.1;Parent=gene-O5C65_001826;Dbxref=NCBI_GP:HJH9171952.1;Name=HJH9171952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463360.1;locus_tag=O5C65_001826;product=YjhX family toxin;protein_id=HJH9171952.1;transl_table=11 DALFDA020000010.1 tpg gene 159179 160810 . + . ID=gene-O5C65_001827;Name=O5C65_001827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001827 DALFDA020000010.1 Protein Homology CDS 159179 160810 . + 0 ID=cds-HJH9171953.1;Parent=gene-O5C65_001827;Dbxref=NCBI_GP:HJH9171953.1;Name=HJH9171953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463359.1;locus_tag=O5C65_001827;product=methyltransferase domain-containing protein;protein_id=HJH9171953.1;transl_table=11 DALFDA020000010.1 tpg gene 161370 162086 . + . ID=gene-O5C65_001828;Name=O5C65_001828;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001828 DALFDA020000010.1 Protein Homology CDS 161370 162086 . + 0 ID=cds-HJH9171954.1;Parent=gene-O5C65_001828;Dbxref=NCBI_GP:HJH9171954.1;Name=HJH9171954.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416490.1;locus_tag=O5C65_001828;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=HJH9171954.1;transl_table=11 DALFDA020000010.1 tpg gene 162567 163442 . - . ID=gene-O5C65_001829;Name=O5C65_001829;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001829 DALFDA020000010.1 Protein Homology CDS 162567 163442 . - 0 ID=cds-HJH9171955.1;Parent=gene-O5C65_001829;Dbxref=NCBI_GP:HJH9171955.1;Name=HJH9171955.1;Ontology_term=GO:0009307,GO:0015666;gbkey=CDS;go_function=restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465694.1;locus_tag=O5C65_001829;product=phosphorothioated DNA-binding restriction endonuclease;protein_id=HJH9171955.1;transl_table=11 DALFDA020000010.1 tpg gene 163988 165013 . + . ID=gene-O5C65_001830;Name=O5C65_001830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001830 DALFDA020000010.1 Protein Homology CDS 163988 165013 . + 0 ID=cds-HJH9171956.1;Parent=gene-O5C65_001830;Dbxref=NCBI_GP:HJH9171956.1;Name=HJH9171956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000369883.1;locus_tag=O5C65_001830;product=phage portal protein;protein_id=HJH9171956.1;transl_table=11 DALFDA020000010.1 tpg gene 165041 166711 . - . ID=gene-O5C65_001831;Name=O5C65_001831;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001831 DALFDA020000010.1 Protein Homology CDS 165041 166711 . - 0 ID=cds-HJH9171957.1;Parent=gene-O5C65_001831;Dbxref=NCBI_GP:HJH9171957.1;Name=HJH9171957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368629.1;locus_tag=O5C65_001831;product=hypothetical protein;protein_id=HJH9171957.1;transl_table=11 DALFDA020000010.1 tpg gene 167027 167299 . - . ID=gene-O5C65_001832;Name=O5C65_001832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001832 DALFDA020000010.1 Protein Homology CDS 167027 167299 . - 0 ID=cds-HJH9171958.1;Parent=gene-O5C65_001832;Dbxref=NCBI_GP:HJH9171958.1;Name=HJH9171958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001185338.1;locus_tag=O5C65_001832;product=ogr/Delta-like zinc finger family protein;protein_id=HJH9171958.1;transl_table=11 DALFDA020000010.1 tpg gene 167299 168060 . - . ID=gene-O5C65_001833;Name=O5C65_001833;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001833 DALFDA020000010.1 Protein Homology CDS 167299 168060 . - 0 ID=cds-HJH9171959.1;Parent=gene-O5C65_001833;Dbxref=NCBI_GP:HJH9171959.1;Name=HJH9171959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001066197.1;locus_tag=O5C65_001833;product=septation initiation protein;protein_id=HJH9171959.1;transl_table=11 DALFDA020000010.1 tpg gene 168461 168763 . - . ID=gene-O5C65_001834;Name=O5C65_001834;end_range=168763,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001834;partial=true DALFDA020000010.1 Protein Homology CDS 168461 168763 . - 0 ID=cds-HJH9171960.1;Parent=gene-O5C65_001834;Dbxref=NCBI_GP:HJH9171960.1;Name=HJH9171960.1;end_range=168763,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211874.1;locus_tag=O5C65_001834;partial=true;product=alkaline-shock protein;protein_id=HJH9171960.1;transl_table=11 ##sequence-region DALFDA020000011.1 1 162333 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000011.1 tpg region 1 162333 . + . ID=DALFDA020000011.1:1..162333;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000011.1 tpg gene 550 1782 . - . ID=gene-O5C65_001835;Name=O5C65_001835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001835 DALFDA020000011.1 Protein Homology CDS 550 1782 . - 0 ID=cds-HJH9171961.1;Parent=gene-O5C65_001835;Dbxref=NCBI_GP:HJH9171961.1;Name=HJH9171961.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309326.1;locus_tag=O5C65_001835;product=tyrosine-type recombinase/integrase;protein_id=HJH9171961.1;transl_table=11 DALFDA020000011.1 tpg pseudogene 2415 2741 . + . ID=gene-O5C65_001836;Name=O5C65_001836;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_001836;pseudo=true DALFDA020000011.1 Protein Homology CDS 2415 2741 . + 0 ID=cds-O5C65_001836;Parent=gene-O5C65_001836;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001124531.1;locus_tag=O5C65_001836;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 DALFDA020000011.1 tpg gene 2930 3127 . + . ID=gene-O5C65_001837;Name=O5C65_001837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001837 DALFDA020000011.1 Protein Homology CDS 2930 3127 . + 0 ID=cds-HJH9171962.1;Parent=gene-O5C65_001837;Dbxref=NCBI_GP:HJH9171962.1;Name=HJH9171962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111984.1;locus_tag=O5C65_001837;product=hypothetical protein;protein_id=HJH9171962.1;transl_table=11 DALFDA020000011.1 tpg pseudogene 3321 4207 . + . ID=gene-O5C65_001838;Name=O5C65_001838;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_001838;pseudo=true DALFDA020000011.1 Protein Homology CDS 3321 4207 . + 0 ID=cds-O5C65_001838;Parent=gene-O5C65_001838;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=O5C65_001838;product=IS256 family transposase;pseudo=true;transl_table=11 DALFDA020000011.1 tpg gene 4187 4381 . + . ID=gene-O5C65_001839;Name=O5C65_001839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001839 DALFDA020000011.1 GeneMarkS-2+ CDS 4187 4381 . + 0 ID=cds-HJH9171963.1;Parent=gene-O5C65_001839;Dbxref=NCBI_GP:HJH9171963.1;Name=HJH9171963.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_001839;product=hypothetical protein;protein_id=HJH9171963.1;transl_table=11 DALFDA020000011.1 tpg gene 4401 4877 . + . ID=gene-O5C65_001840;Name=O5C65_001840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001840 DALFDA020000011.1 Protein Homology CDS 4401 4877 . + 0 ID=cds-HJH9171964.1;Parent=gene-O5C65_001840;Dbxref=NCBI_GP:HJH9171964.1;Name=HJH9171964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747668.1;locus_tag=O5C65_001840;product=adhesin;protein_id=HJH9171964.1;transl_table=11 DALFDA020000011.1 tpg gene 5375 7651 . - . ID=gene-O5C65_001841;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=O5C65_001841 DALFDA020000011.1 Protein Homology CDS 5375 7651 . - 0 ID=cds-HJH9171965.1;Parent=gene-O5C65_001841;Dbxref=NCBI_GP:HJH9171965.1;Name=HJH9171965.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459922.1;locus_tag=O5C65_001841;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=HJH9171965.1;transl_table=11 DALFDA020000011.1 tpg gene 7682 8002 . - . ID=gene-O5C65_001842;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=O5C65_001842 DALFDA020000011.1 Protein Homology CDS 7682 8002 . - 0 ID=cds-HJH9171966.1;Parent=gene-O5C65_001842;Dbxref=NCBI_GP:HJH9171966.1;Name=HJH9171966.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=O5C65_001842;product=ATP-dependent Clp protease adapter ClpS;protein_id=HJH9171966.1;transl_table=11 DALFDA020000011.1 tpg gene 8098 8175 . - . ID=gene-O5C65_001843;Name=O5C65_001843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001843 DALFDA020000011.1 Protein Homology CDS 8098 8175 . - 0 ID=cds-HJH9171967.1;Parent=gene-O5C65_001843;Dbxref=NCBI_GP:HJH9171967.1;Name=HJH9171967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=O5C65_001843;product=hypothetical protein;protein_id=HJH9171967.1;transl_table=11 DALFDA020000011.1 tpg gene 8326 8547 . + . ID=gene-O5C65_001844;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=O5C65_001844 DALFDA020000011.1 Protein Homology CDS 8326 8547 . + 0 ID=cds-HJH9171968.1;Parent=gene-O5C65_001844;Dbxref=NCBI_GP:HJH9171968.1;Name=HJH9171968.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459920.1;locus_tag=O5C65_001844;product=cold shock-like protein CspD;protein_id=HJH9171968.1;transl_table=11 DALFDA020000011.1 tpg gene 8677 10623 . - . ID=gene-O5C65_001845;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=O5C65_001845 DALFDA020000011.1 Protein Homology CDS 8677 10623 . - 0 ID=cds-HJH9171969.1;Parent=gene-O5C65_001845;Dbxref=NCBI_GP:HJH9171969.1;Name=HJH9171969.1;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459919.1;locus_tag=O5C65_001845;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=HJH9171969.1;transl_table=11 DALFDA020000011.1 tpg gene 10620 11738 . - . ID=gene-O5C65_001846;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=O5C65_001846 DALFDA020000011.1 Protein Homology CDS 10620 11738 . - 0 ID=cds-HJH9171970.1;Parent=gene-O5C65_001846;Dbxref=NCBI_GP:HJH9171970.1;Name=HJH9171970.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459918.1;locus_tag=O5C65_001846;product=macrolide transporter subunit MacA;protein_id=HJH9171970.1;transl_table=11 DALFDA020000011.1 tpg gene 11884 12834 . + . ID=gene-O5C65_001847;Name=O5C65_001847;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001847 DALFDA020000011.1 Protein Homology CDS 11884 12834 . + 0 ID=cds-HJH9171971.1;Parent=gene-O5C65_001847;Dbxref=NCBI_GP:HJH9171971.1;Name=HJH9171971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519667.1;locus_tag=O5C65_001847;product=VirK/YbjX family protein;protein_id=HJH9171971.1;transl_table=11 DALFDA020000011.1 tpg gene 12831 14489 . - . ID=gene-O5C65_001848;Name=O5C65_001848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001848 DALFDA020000011.1 Protein Homology CDS 12831 14489 . - 0 ID=cds-HJH9171972.1;Parent=gene-O5C65_001848;Dbxref=NCBI_GP:HJH9171972.1;Name=HJH9171972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459916.2;locus_tag=O5C65_001848;product=ATP-dependent endonuclease;protein_id=HJH9171972.1;transl_table=11 DALFDA020000011.1 tpg gene 14691 15590 . + . ID=gene-O5C65_001849;Name=O5C65_001849;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001849 DALFDA020000011.1 Protein Homology CDS 14691 15590 . + 0 ID=cds-HJH9171973.1;Parent=gene-O5C65_001849;Dbxref=NCBI_GP:HJH9171973.1;Name=HJH9171973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459915.1;locus_tag=O5C65_001849;product=lysine exporter LysO family protein;protein_id=HJH9171973.1;transl_table=11 DALFDA020000011.1 tpg gene 15734 17386 . + . ID=gene-O5C65_001850;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=O5C65_001850 DALFDA020000011.1 Protein Homology CDS 15734 17386 . + 0 ID=cds-HJH9171974.1;Parent=gene-O5C65_001850;Dbxref=NCBI_GP:HJH9171974.1;Name=HJH9171974.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=O5C65_001850;product=hydroxylamine reductase;protein_id=HJH9171974.1;transl_table=11 DALFDA020000011.1 tpg gene 17398 18366 . + . ID=gene-O5C65_001851;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=O5C65_001851 DALFDA020000011.1 Protein Homology CDS 17398 18366 . + 0 ID=cds-HJH9171975.1;Parent=gene-O5C65_001851;Dbxref=NCBI_GP:HJH9171975.1;Name=HJH9171975.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308985.1;locus_tag=O5C65_001851;product=NADH oxidoreductase;protein_id=HJH9171975.1;transl_table=11 DALFDA020000011.1 tpg gene 18524 20242 . + . ID=gene-O5C65_001852;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=O5C65_001852 DALFDA020000011.1 Protein Homology CDS 18524 20242 . + 0 ID=cds-HJH9171976.1;Parent=gene-O5C65_001852;Dbxref=NCBI_GP:HJH9171976.1;Name=HJH9171976.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459912.1;locus_tag=O5C65_001852;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=HJH9171976.1;transl_table=11 DALFDA020000011.1 tpg gene 20281 21282 . + . ID=gene-O5C65_001853;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=O5C65_001853 DALFDA020000011.1 Protein Homology CDS 20281 21282 . + 0 ID=cds-HJH9171977.1;Parent=gene-O5C65_001853;Dbxref=NCBI_GP:HJH9171977.1;Name=HJH9171977.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459911.1;locus_tag=O5C65_001853;product=low-specificity L-threonine aldolase;protein_id=HJH9171977.1;transl_table=11 DALFDA020000011.1 tpg gene 21293 22726 . + . ID=gene-O5C65_001854;Name=O5C65_001854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001854 DALFDA020000011.1 Protein Homology CDS 21293 22726 . + 0 ID=cds-HJH9171978.1;Parent=gene-O5C65_001854;Dbxref=NCBI_GP:HJH9171978.1;Name=HJH9171978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459910.1;locus_tag=O5C65_001854;product=DUF2867 domain-containing protein;protein_id=HJH9171978.1;transl_table=11 DALFDA020000011.1 tpg gene 22822 23835 . + . ID=gene-O5C65_001855;Name=O5C65_001855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001855 DALFDA020000011.1 Protein Homology CDS 22822 23835 . + 0 ID=cds-HJH9171979.1;Parent=gene-O5C65_001855;Dbxref=NCBI_GP:HJH9171979.1;Name=HJH9171979.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459909.1;locus_tag=O5C65_001855;product=NAD-dependent epimerase/dehydratase family protein;protein_id=HJH9171979.1;transl_table=11 DALFDA020000011.1 tpg gene 23832 24662 . - . ID=gene-O5C65_001856;Name=O5C65_001856;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001856 DALFDA020000011.1 Protein Homology CDS 23832 24662 . - 0 ID=cds-HJH9171980.1;Parent=gene-O5C65_001856;Dbxref=NCBI_GP:HJH9171980.1;Name=HJH9171980.1;Ontology_term=GO:0071555,GO:0008270,GO:0008745,GO:0042834,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459908.1;locus_tag=O5C65_001856;product=N-acetylmuramoyl-L-alanine amidase;protein_id=HJH9171980.1;transl_table=11 DALFDA020000011.1 tpg gene 24659 24982 . - . ID=gene-O5C65_001857;Name=O5C65_001857;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001857 DALFDA020000011.1 Protein Homology CDS 24659 24982 . - 0 ID=cds-HJH9171981.1;Parent=gene-O5C65_001857;Dbxref=NCBI_GP:HJH9171981.1;Name=HJH9171981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=O5C65_001857;product=heavy metal-binding domain-containing protein;protein_id=HJH9171981.1;transl_table=11 DALFDA020000011.1 tpg gene 25110 25625 . + . ID=gene-O5C65_001858;Name=O5C65_001858;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001858 DALFDA020000011.1 Protein Homology CDS 25110 25625 . + 0 ID=cds-HJH9171982.1;Parent=gene-O5C65_001858;Dbxref=NCBI_GP:HJH9171982.1;Name=HJH9171982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459868.1;locus_tag=O5C65_001858;product=lipoprotein;protein_id=HJH9171982.1;transl_table=11 DALFDA020000011.1 tpg gene 25855 26583 . + . ID=gene-O5C65_001859;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=O5C65_001859 DALFDA020000011.1 Protein Homology CDS 25855 26583 . + 0 ID=cds-HJH9171983.1;Parent=gene-O5C65_001859;Dbxref=NCBI_GP:HJH9171983.1;Name=HJH9171983.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=O5C65_001859;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=HJH9171983.1;transl_table=11 DALFDA020000011.1 tpg gene 26601 27332 . + . ID=gene-O5C65_001860;Name=artI;gbkey=Gene;gene=artI;gene_biotype=protein_coding;locus_tag=O5C65_001860 DALFDA020000011.1 Protein Homology CDS 26601 27332 . + 0 ID=cds-HJH9171984.1;Parent=gene-O5C65_001860;Dbxref=NCBI_GP:HJH9171984.1;Name=HJH9171984.1;Ontology_term=GO:0015424,GO:0043190;gbkey=CDS;gene=artI;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type amino acid transporter activity|0015424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459866.1;locus_tag=O5C65_001860;product=arginine ABC transporter substrate-binding protein ArtI;protein_id=HJH9171984.1;transl_table=11 DALFDA020000011.1 tpg gene 27339 28055 . + . ID=gene-O5C65_001861;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=O5C65_001861 DALFDA020000011.1 Protein Homology CDS 27339 28055 . + 0 ID=cds-HJH9171985.1;Parent=gene-O5C65_001861;Dbxref=NCBI_GP:HJH9171985.1;Name=HJH9171985.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459865.1;locus_tag=O5C65_001861;product=arginine ABC transporter permease ArtQ;protein_id=HJH9171985.1;transl_table=11 DALFDA020000011.1 tpg gene 28055 28723 . + . ID=gene-O5C65_001862;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=O5C65_001862 DALFDA020000011.1 Protein Homology CDS 28055 28723 . + 0 ID=cds-HJH9171986.1;Parent=gene-O5C65_001862;Dbxref=NCBI_GP:HJH9171986.1;Name=HJH9171986.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459864.1;locus_tag=O5C65_001862;product=arginine ABC transporter permease ArtM;protein_id=HJH9171986.1;transl_table=11 DALFDA020000011.1 tpg gene 28960 29691 . + . ID=gene-O5C65_001863;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=O5C65_001863 DALFDA020000011.1 Protein Homology CDS 28960 29691 . + 0 ID=cds-HJH9171987.1;Parent=gene-O5C65_001863;Dbxref=NCBI_GP:HJH9171987.1;Name=HJH9171987.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459863.1;locus_tag=O5C65_001863;product=arginine ABC transporter substrate-binding protein ArtJ;protein_id=HJH9171987.1;transl_table=11 DALFDA020000011.1 tpg gene 29910 31397 . - . ID=gene-O5C65_001864;Name=O5C65_001864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001864 DALFDA020000011.1 Protein Homology CDS 29910 31397 . - 0 ID=cds-HJH9171988.1;Parent=gene-O5C65_001864;Dbxref=NCBI_GP:HJH9171988.1;Name=HJH9171988.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459862.1;locus_tag=O5C65_001864;product=sulfatase;protein_id=HJH9171988.1;transl_table=11 DALFDA020000011.1 tpg gene 31407 31727 . - . ID=gene-O5C65_001865;Name=O5C65_001865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001865 DALFDA020000011.1 Protein Homology CDS 31407 31727 . - 0 ID=cds-HJH9171989.1;Parent=gene-O5C65_001865;Dbxref=NCBI_GP:HJH9171989.1;Name=HJH9171989.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459861.1;locus_tag=O5C65_001865;product=PTS sugar transporter subunit IIB;protein_id=HJH9171989.1;transl_table=11 DALFDA020000011.1 tpg gene 31757 33100 . - . ID=gene-O5C65_001866;Name=O5C65_001866;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001866 DALFDA020000011.1 Protein Homology CDS 31757 33100 . - 0 ID=cds-HJH9171990.1;Parent=gene-O5C65_001866;Dbxref=NCBI_GP:HJH9171990.1;Name=HJH9171990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459860.1;locus_tag=O5C65_001866;product=PTS sugar transporter subunit IIC;protein_id=HJH9171990.1;transl_table=11 DALFDA020000011.1 tpg gene 33395 34522 . - . ID=gene-O5C65_001867;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=O5C65_001867 DALFDA020000011.1 Protein Homology CDS 33395 34522 . - 0 ID=cds-HJH9171991.1;Parent=gene-O5C65_001867;Dbxref=NCBI_GP:HJH9171991.1;Name=HJH9171991.1;Ontology_term=GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001149796.1;locus_tag=O5C65_001867;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=HJH9171991.1;transl_table=11 DALFDA020000011.1 tpg gene 34565 35038 . - . ID=gene-O5C65_001868;Name=O5C65_001868;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001868 DALFDA020000011.1 Protein Homology CDS 34565 35038 . - 0 ID=cds-HJH9171992.1;Parent=gene-O5C65_001868;Dbxref=NCBI_GP:HJH9171992.1;Name=HJH9171992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459858.1;locus_tag=O5C65_001868;product=YbjO family protein;protein_id=HJH9171992.1;transl_table=11 DALFDA020000011.1 tpg gene 35112 35957 . - . ID=gene-O5C65_001869;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=O5C65_001869 DALFDA020000011.1 Protein Homology CDS 35112 35957 . - 0 ID=cds-HJH9171993.1;Parent=gene-O5C65_001869;Dbxref=NCBI_GP:HJH9171993.1;Name=HJH9171993.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459857.1;locus_tag=O5C65_001869;product=putrescine ABC transporter permease PotI;protein_id=HJH9171993.1;transl_table=11 DALFDA020000011.1 tpg gene 35954 36907 . - . ID=gene-O5C65_001870;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=O5C65_001870 DALFDA020000011.1 Protein Homology CDS 35954 36907 . - 0 ID=cds-HJH9171994.1;Parent=gene-O5C65_001870;Dbxref=NCBI_GP:HJH9171994.1;Name=HJH9171994.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459856.1;locus_tag=O5C65_001870;product=putrescine ABC transporter permease PotH;protein_id=HJH9171994.1;transl_table=11 DALFDA020000011.1 tpg gene 36917 38050 . - . ID=gene-O5C65_001871;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=O5C65_001871 DALFDA020000011.1 Protein Homology CDS 36917 38050 . - 0 ID=cds-HJH9171995.1;Parent=gene-O5C65_001871;Dbxref=NCBI_GP:HJH9171995.1;Name=HJH9171995.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=O5C65_001871;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=HJH9171995.1;transl_table=11 DALFDA020000011.1 tpg gene 38138 39250 . - . ID=gene-O5C65_001872;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=O5C65_001872 DALFDA020000011.1 Protein Homology CDS 38138 39250 . - 0 ID=cds-HJH9171996.1;Parent=gene-O5C65_001872;Dbxref=NCBI_GP:HJH9171996.1;Name=HJH9171996.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459854.1;locus_tag=O5C65_001872;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=HJH9171996.1;transl_table=11 DALFDA020000011.1 tpg gene 39599 40075 . - . ID=gene-O5C65_001873;Name=O5C65_001873;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001873 DALFDA020000011.1 Protein Homology CDS 39599 40075 . - 0 ID=cds-HJH9171997.1;Parent=gene-O5C65_001873;Dbxref=NCBI_GP:HJH9171997.1;Name=HJH9171997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459853.1;locus_tag=O5C65_001873;product=YbjN domain-containing protein;protein_id=HJH9171997.1;transl_table=11 DALFDA020000011.1 tpg gene 40172 41074 . - . ID=gene-O5C65_001874;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=O5C65_001874 DALFDA020000011.1 Protein Homology CDS 40172 41074 . - 0 ID=cds-HJH9171998.1;Parent=gene-O5C65_001874;Dbxref=NCBI_GP:HJH9171998.1;Name=HJH9171998.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459852.1;locus_tag=O5C65_001874;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=HJH9171998.1;transl_table=11 DALFDA020000011.1 tpg gene 41132 41854 . - . ID=gene-O5C65_001875;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=O5C65_001875 DALFDA020000011.1 Protein Homology CDS 41132 41854 . - 0 ID=cds-HJH9171999.1;Parent=gene-O5C65_001875;Dbxref=NCBI_GP:HJH9171999.1;Name=HJH9171999.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459851.1;locus_tag=O5C65_001875;product=nitroreductase NfsA;protein_id=HJH9171999.1;transl_table=11 DALFDA020000011.1 tpg gene 41838 42128 . - . ID=gene-O5C65_001876;Name=O5C65_001876;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001876 DALFDA020000011.1 Protein Homology CDS 41838 42128 . - 0 ID=cds-HJH9172000.1;Parent=gene-O5C65_001876;Dbxref=NCBI_GP:HJH9172000.1;Name=HJH9172000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459850.1;locus_tag=O5C65_001876;product=YbjC family protein;protein_id=HJH9172000.1;transl_table=11 DALFDA020000011.1 tpg gene 42298 42561 . + . ID=gene-O5C65_001877;Name=O5C65_001877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001877 DALFDA020000011.1 Protein Homology CDS 42298 42561 . + 0 ID=cds-HJH9172001.1;Parent=gene-O5C65_001877;Dbxref=NCBI_GP:HJH9172001.1;Name=HJH9172001.1;Ontology_term=GO:0045454,GO:0009055,GO:0015035;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459849.1;locus_tag=O5C65_001877;product=GrxA family glutaredoxin;protein_id=HJH9172001.1;transl_table=11 DALFDA020000011.1 tpg gene 42593 42970 . - . ID=gene-O5C65_001878;Name=O5C65_001878;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001878 DALFDA020000011.1 Protein Homology CDS 42593 42970 . - 0 ID=cds-HJH9172002.1;Parent=gene-O5C65_001878;Dbxref=NCBI_GP:HJH9172002.1;Name=HJH9172002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459848.1;locus_tag=O5C65_001878;product=inner membrane protein YbjM;protein_id=HJH9172002.1;transl_table=11 DALFDA020000011.1 tpg gene 43241 44926 . + . ID=gene-O5C65_001879;Name=O5C65_001879;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001879 DALFDA020000011.1 Protein Homology CDS 43241 44926 . + 0 ID=cds-HJH9172003.1;Parent=gene-O5C65_001879;Dbxref=NCBI_GP:HJH9172003.1;Name=HJH9172003.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=O5C65_001879;product=aspartate:alanine antiporter;protein_id=HJH9172003.1;transl_table=11 DALFDA020000011.1 tpg gene 45043 45663 . - . ID=gene-O5C65_001880;Name=O5C65_001880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001880 DALFDA020000011.1 Protein Homology CDS 45043 45663 . - 0 ID=cds-HJH9172004.1;Parent=gene-O5C65_001880;Dbxref=NCBI_GP:HJH9172004.1;Name=HJH9172004.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459846.1;locus_tag=O5C65_001880;product=TetR/AcrR family transcriptional regulator;protein_id=HJH9172004.1;transl_table=11 DALFDA020000011.1 tpg gene 45831 47042 . + . ID=gene-O5C65_001881;Name=O5C65_001881;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001881 DALFDA020000011.1 Protein Homology CDS 45831 47042 . + 0 ID=cds-HJH9172005.1;Parent=gene-O5C65_001881;Dbxref=NCBI_GP:HJH9172005.1;Name=HJH9172005.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459845.1;locus_tag=O5C65_001881;product=MFS transporter;protein_id=HJH9172005.1;transl_table=11 DALFDA020000011.1 tpg gene 47039 47854 . + . ID=gene-O5C65_001882;Name=O5C65_001882;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001882 DALFDA020000011.1 Protein Homology CDS 47039 47854 . + 0 ID=cds-HJH9172006.1;Parent=gene-O5C65_001882;Dbxref=NCBI_GP:HJH9172006.1;Name=HJH9172006.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459844.1;locus_tag=O5C65_001882;product=Cof-type HAD-IIB family hydrolase;protein_id=HJH9172006.1;transl_table=11 DALFDA020000011.1 tpg gene 47908 49140 . - . ID=gene-O5C65_001883;Name=O5C65_001883;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001883 DALFDA020000011.1 Protein Homology CDS 47908 49140 . - 0 ID=cds-HJH9172007.1;Parent=gene-O5C65_001883;Dbxref=NCBI_GP:HJH9172007.1;Name=HJH9172007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459843.1;locus_tag=O5C65_001883;product=MFS transporter;protein_id=HJH9172007.1;transl_table=11 DALFDA020000011.1 tpg gene 49453 50061 . + . ID=gene-O5C65_001884;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=O5C65_001884 DALFDA020000011.1 Protein Homology CDS 49453 50061 . + 0 ID=cds-HJH9172008.1;Parent=gene-O5C65_001884;Dbxref=NCBI_GP:HJH9172008.1;Name=HJH9172008.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459842.1;locus_tag=O5C65_001884;product=undecaprenyl-diphosphate phosphatase;protein_id=HJH9172008.1;transl_table=11 DALFDA020000011.1 tpg gene 50133 50891 . + . ID=gene-O5C65_001885;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=O5C65_001885 DALFDA020000011.1 Protein Homology CDS 50133 50891 . + 0 ID=cds-HJH9172009.1;Parent=gene-O5C65_001885;Dbxref=NCBI_GP:HJH9172009.1;Name=HJH9172009.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459841.1;locus_tag=O5C65_001885;product=DNA-binding transcriptional repressor DeoR;protein_id=HJH9172009.1;transl_table=11 DALFDA020000011.1 tpg gene 50937 52139 . - . ID=gene-O5C65_001886;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=O5C65_001886 DALFDA020000011.1 Protein Homology CDS 50937 52139 . - 0 ID=cds-HJH9172010.1;Parent=gene-O5C65_001886;Dbxref=NCBI_GP:HJH9172010.1;Name=HJH9172010.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459840.1;locus_tag=O5C65_001886;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=HJH9172010.1;transl_table=11 DALFDA020000011.1 tpg gene 52383 53009 . + . ID=gene-O5C65_001887;Name=O5C65_001887;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001887 DALFDA020000011.1 Protein Homology CDS 52383 53009 . + 0 ID=cds-HJH9172011.1;Parent=gene-O5C65_001887;Dbxref=NCBI_GP:HJH9172011.1;Name=HJH9172011.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459839.1;locus_tag=O5C65_001887;product=glutathione S-transferase family protein;protein_id=HJH9172011.1;transl_table=11 DALFDA020000011.1 tpg gene 53006 53533 . - . ID=gene-O5C65_001888;Name=O5C65_001888;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001888 DALFDA020000011.1 Protein Homology CDS 53006 53533 . - 0 ID=cds-HJH9172012.1;Parent=gene-O5C65_001888;Dbxref=NCBI_GP:HJH9172012.1;Name=HJH9172012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252732.1;locus_tag=O5C65_001888;product=PQQ-dependent sugar dehydrogenase;protein_id=HJH9172012.1;transl_table=11 DALFDA020000011.1 tpg pseudogene 53594 53689 . - . ID=gene-O5C65_001889;Name=O5C65_001889;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_001889;pseudo=true DALFDA020000011.1 Protein Homology CDS 53594 53689 . - 0 ID=cds-O5C65_001889;Parent=gene-O5C65_001889;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF015750.6;locus_tag=O5C65_001889;product=IS1 family transposase;pseudo=true;transl_table=11 DALFDA020000011.1 tpg gene 54033 54458 . + . ID=gene-O5C65_001890;Name=O5C65_001890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001890 DALFDA020000011.1 Protein Homology CDS 54033 54458 . + 0 ID=cds-HJH9172013.1;Parent=gene-O5C65_001890;Dbxref=NCBI_GP:HJH9172013.1;Name=HJH9172013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459837.1;locus_tag=O5C65_001890;product=GntP family permease;protein_id=HJH9172013.1;transl_table=11 DALFDA020000011.1 tpg gene 54723 55613 . + . ID=gene-O5C65_001891;Name=O5C65_001891;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001891 DALFDA020000011.1 Protein Homology CDS 54723 55613 . + 0 ID=cds-HJH9172014.1;Parent=gene-O5C65_001891;Dbxref=NCBI_GP:HJH9172014.1;Name=HJH9172014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459836.1;locus_tag=O5C65_001891;product=LysR family transcriptional regulator;protein_id=HJH9172014.1;transl_table=11 DALFDA020000011.1 tpg gene 55619 57304 . - . ID=gene-O5C65_001892;Name=O5C65_001892;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001892 DALFDA020000011.1 Protein Homology CDS 55619 57304 . - 0 ID=cds-HJH9172015.1;Parent=gene-O5C65_001892;Dbxref=NCBI_GP:HJH9172015.1;Name=HJH9172015.1;Ontology_term=GO:0022900,GO:0004174,GO:0046872,GO:0051539;gbkey=CDS;go_function=electron-transferring-flavoprotein dehydrogenase activity|0004174||IEA,metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459835.1;locus_tag=O5C65_001892;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=HJH9172015.1;transl_table=11 DALFDA020000011.1 tpg gene 57753 58916 . - . ID=gene-O5C65_001893;Name=O5C65_001893;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001893 DALFDA020000011.1 Protein Homology CDS 57753 58916 . - 0 ID=cds-HJH9172016.1;Parent=gene-O5C65_001893;Dbxref=NCBI_GP:HJH9172016.1;Name=HJH9172016.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459834.1;locus_tag=O5C65_001893;product=acyl-CoA dehydrogenase family protein;protein_id=HJH9172016.1;transl_table=11 DALFDA020000011.1 tpg gene 58913 59176 . - . ID=gene-O5C65_001894;Name=O5C65_001894;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001894 DALFDA020000011.1 GeneMarkS-2+ CDS 58913 59176 . - 0 ID=cds-HJH9172017.1;Parent=gene-O5C65_001894;Dbxref=NCBI_GP:HJH9172017.1;Name=HJH9172017.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_001894;product=hypothetical protein;protein_id=HJH9172017.1;transl_table=11 DALFDA020000011.1 tpg gene 59209 60162 . - . ID=gene-O5C65_001895;Name=O5C65_001895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001895 DALFDA020000011.1 Protein Homology CDS 59209 60162 . - 0 ID=cds-HJH9172018.1;Parent=gene-O5C65_001895;Dbxref=NCBI_GP:HJH9172018.1;Name=HJH9172018.1;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459833.1;locus_tag=O5C65_001895;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=HJH9172018.1;transl_table=11 DALFDA020000011.1 tpg gene 60173 60922 . - . ID=gene-O5C65_001896;Name=O5C65_001896;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001896 DALFDA020000011.1 Protein Homology CDS 60173 60922 . - 0 ID=cds-HJH9172019.1;Parent=gene-O5C65_001896;Dbxref=NCBI_GP:HJH9172019.1;Name=HJH9172019.1;Ontology_term=GO:0009055;gbkey=CDS;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002949615.1;locus_tag=O5C65_001896;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=HJH9172019.1;transl_table=11 DALFDA020000011.1 tpg gene 60945 61460 . - . ID=gene-O5C65_001897;Name=O5C65_001897;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001897 DALFDA020000011.1 Protein Homology CDS 60945 61460 . - 0 ID=cds-HJH9172020.1;Parent=gene-O5C65_001897;Dbxref=NCBI_GP:HJH9172020.1;Name=HJH9172020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459831.1;locus_tag=O5C65_001897;product=STM0854 family CoA ester lyase;protein_id=HJH9172020.1;transl_table=11 DALFDA020000011.1 tpg pseudogene 61786 62071 . - . ID=gene-O5C65_001898;Name=O5C65_001898;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_001898;pseudo=true DALFDA020000011.1 Protein Homology CDS 61786 62071 . - 0 ID=cds-O5C65_001898;Parent=gene-O5C65_001898;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_046881606.1;locus_tag=O5C65_001898;product=IS4-like element ISEc60 family transposase;pseudo=true;transl_table=11 DALFDA020000011.1 tpg gene 62173 62556 . - . ID=gene-O5C65_001899;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=O5C65_001899 DALFDA020000011.1 Protein Homology CDS 62173 62556 . - 0 ID=cds-HJH9172021.1;Parent=gene-O5C65_001899;Dbxref=NCBI_GP:HJH9172021.1;Name=HJH9172021.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459830.1;locus_tag=O5C65_001899;product=biofilm formation regulator BssR;protein_id=HJH9172021.1;transl_table=11 DALFDA020000011.1 tpg gene 62787 64112 . + . ID=gene-O5C65_001900;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=O5C65_001900 DALFDA020000011.1 Protein Homology CDS 62787 64112 . + 0 ID=cds-HJH9172022.1;Parent=gene-O5C65_001900;Dbxref=NCBI_GP:HJH9172022.1;Name=HJH9172022.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459829.1;locus_tag=O5C65_001900;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=HJH9172022.1;transl_table=11 DALFDA020000011.1 tpg gene 64203 65114 . - . ID=gene-O5C65_001901;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=O5C65_001901 DALFDA020000011.1 Protein Homology CDS 64203 65114 . - 0 ID=cds-HJH9172023.1;Parent=gene-O5C65_001901;Dbxref=NCBI_GP:HJH9172023.1;Name=HJH9172023.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459828.1;locus_tag=O5C65_001901;product=glutathione ABC transporter permease GsiD;protein_id=HJH9172023.1;transl_table=11 DALFDA020000011.1 tpg gene 65117 66037 . - . ID=gene-O5C65_001902;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=O5C65_001902 DALFDA020000011.1 Protein Homology CDS 65117 66037 . - 0 ID=cds-HJH9172024.1;Parent=gene-O5C65_001902;Dbxref=NCBI_GP:HJH9172024.1;Name=HJH9172024.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459827.1;locus_tag=O5C65_001902;product=glutathione ABC transporter permease GsiC;protein_id=HJH9172024.1;transl_table=11 DALFDA020000011.1 tpg gene 66098 67636 . - . ID=gene-O5C65_001903;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=O5C65_001903 DALFDA020000011.1 Protein Homology CDS 66098 67636 . - 0 ID=cds-HJH9172025.1;Parent=gene-O5C65_001903;Dbxref=NCBI_GP:HJH9172025.1;Name=HJH9172025.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459826.1;locus_tag=O5C65_001903;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=HJH9172025.1;transl_table=11 DALFDA020000011.1 tpg gene 67669 69540 . - . ID=gene-O5C65_001904;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=O5C65_001904 DALFDA020000011.1 Protein Homology CDS 67669 69540 . - 0 ID=cds-HJH9172026.1;Parent=gene-O5C65_001904;Dbxref=NCBI_GP:HJH9172026.1;Name=HJH9172026.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459825.1;locus_tag=O5C65_001904;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=HJH9172026.1;transl_table=11 DALFDA020000011.1 tpg gene 69551 70492 . - . ID=gene-O5C65_001905;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=O5C65_001905 DALFDA020000011.1 Protein Homology CDS 69551 70492 . - 0 ID=cds-HJH9172027.1;Parent=gene-O5C65_001905;Dbxref=NCBI_GP:HJH9172027.1;Name=HJH9172027.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459824.1;locus_tag=O5C65_001905;product=beta-aspartyl-peptidase;protein_id=HJH9172027.1;transl_table=11 DALFDA020000011.1 tpg gene 70696 71931 . + . ID=gene-O5C65_001906;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=O5C65_001906 DALFDA020000011.1 Protein Homology CDS 70696 71931 . + 0 ID=cds-HJH9172028.1;Parent=gene-O5C65_001906;Dbxref=NCBI_GP:HJH9172028.1;Name=HJH9172028.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308932.1;locus_tag=O5C65_001906;product=molybdopterin molybdotransferase MoeA;protein_id=HJH9172028.1;transl_table=11 DALFDA020000011.1 tpg gene 71931 72680 . + . ID=gene-O5C65_001907;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=O5C65_001907 DALFDA020000011.1 Protein Homology CDS 71931 72680 . + 0 ID=cds-HJH9172029.1;Parent=gene-O5C65_001907;Dbxref=NCBI_GP:HJH9172029.1;Name=HJH9172029.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459822.1;locus_tag=O5C65_001907;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=HJH9172029.1;transl_table=11 DALFDA020000011.1 tpg gene 72958 73857 . + . ID=gene-O5C65_001908;Name=O5C65_001908;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001908 DALFDA020000011.1 Protein Homology CDS 72958 73857 . + 0 ID=cds-HJH9172030.1;Parent=gene-O5C65_001908;Dbxref=NCBI_GP:HJH9172030.1;Name=HJH9172030.1;Ontology_term=GO:0043687,GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459821.1;locus_tag=O5C65_001908;product=glycyl-radical enzyme activating protein;protein_id=HJH9172030.1;transl_table=11 DALFDA020000011.1 tpg gene 73863 76295 . + . ID=gene-O5C65_001909;Name=O5C65_001909;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001909 DALFDA020000011.1 Protein Homology CDS 73863 76295 . + 0 ID=cds-HJH9172031.1;Parent=gene-O5C65_001909;Dbxref=NCBI_GP:HJH9172031.1;Name=HJH9172031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459820.1;locus_tag=O5C65_001909;product=glycyl radical protein;protein_id=HJH9172031.1;transl_table=11 DALFDA020000011.1 tpg gene 76373 77182 . - . ID=gene-O5C65_001910;Name=O5C65_001910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001910 DALFDA020000011.1 Protein Homology CDS 76373 77182 . - 0 ID=cds-HJH9172032.1;Parent=gene-O5C65_001910;Dbxref=NCBI_GP:HJH9172032.1;Name=HJH9172032.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459819.1;locus_tag=O5C65_001910;product=Cof-type HAD-IIB family hydrolase;protein_id=HJH9172032.1;transl_table=11 DALFDA020000011.1 tpg gene 77444 78709 . + . ID=gene-O5C65_001911;Name=O5C65_001911;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001911 DALFDA020000011.1 Protein Homology CDS 77444 78709 . + 0 ID=cds-HJH9172033.1;Parent=gene-O5C65_001911;Dbxref=NCBI_GP:HJH9172033.1;Name=HJH9172033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459818.1;locus_tag=O5C65_001911;product=DUF1479 domain-containing protein;protein_id=HJH9172033.1;transl_table=11 DALFDA020000011.1 tpg gene 78831 80426 . - . ID=gene-O5C65_001912;Name=O5C65_001912;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001912 DALFDA020000011.1 Protein Homology CDS 78831 80426 . - 0 ID=cds-HJH9172034.1;Parent=gene-O5C65_001912;Dbxref=NCBI_GP:HJH9172034.1;Name=HJH9172034.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961428.1;locus_tag=O5C65_001912;product=ABC-F family ATPase;protein_id=HJH9172034.1;transl_table=11 DALFDA020000011.1 tpg gene 80646 81566 . + . ID=gene-O5C65_001913;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=O5C65_001913 DALFDA020000011.1 Protein Homology CDS 80646 81566 . + 0 ID=cds-HJH9172035.1;Parent=gene-O5C65_001913;Dbxref=NCBI_GP:HJH9172035.1;Name=HJH9172035.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459814.1;locus_tag=O5C65_001913;product=L%2CD-transpeptidase;protein_id=HJH9172035.1;transl_table=11 DALFDA020000011.1 tpg gene 81610 82722 . - . ID=gene-O5C65_001914;Name=O5C65_001914;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001914 DALFDA020000011.1 Protein Homology CDS 81610 82722 . - 0 ID=cds-HJH9172036.1;Parent=gene-O5C65_001914;Dbxref=NCBI_GP:HJH9172036.1;Name=HJH9172036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459813.1;locus_tag=O5C65_001914;product=anion transporter;protein_id=HJH9172036.1;transl_table=11 DALFDA020000011.1 tpg gene 82719 83192 . - . ID=gene-O5C65_001915;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=O5C65_001915 DALFDA020000011.1 Protein Homology CDS 82719 83192 . - 0 ID=cds-HJH9172037.1;Parent=gene-O5C65_001915;Dbxref=NCBI_GP:HJH9172037.1;Name=HJH9172037.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459812.1;locus_tag=O5C65_001915;product=manganese-binding transcriptional regulator MntR;protein_id=HJH9172037.1;transl_table=11 DALFDA020000011.1 tpg gene 83378 83506 . + . ID=gene-O5C65_001916;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=O5C65_001916 DALFDA020000011.1 Protein Homology CDS 83378 83506 . + 0 ID=cds-HJH9172038.1;Parent=gene-O5C65_001916;Dbxref=NCBI_GP:HJH9172038.1;Name=HJH9172038.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=O5C65_001916;product=manganase accumulation protein MntS;protein_id=HJH9172038.1;transl_table=11 DALFDA020000011.1 tpg gene 83771 85351 . + . ID=gene-O5C65_001917;Name=O5C65_001917;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001917 DALFDA020000011.1 Protein Homology CDS 83771 85351 . + 0 ID=cds-HJH9172039.1;Parent=gene-O5C65_001917;Dbxref=NCBI_GP:HJH9172039.1;Name=HJH9172039.1;Ontology_term=GO:0009244,GO:1900727,GO:0016776;gbkey=CDS;go_function=phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA,osmoregulated periplasmic glucan biosynthetic process|1900727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459811.1;locus_tag=O5C65_001917;product=phosphoethanolamine transferase;protein_id=HJH9172039.1;transl_table=11 DALFDA020000011.1 tpg gene 85416 85931 . - . ID=gene-O5C65_001918;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=O5C65_001918 DALFDA020000011.1 Protein Homology CDS 85416 85931 . - 0 ID=cds-HJH9172040.1;Parent=gene-O5C65_001918;Dbxref=NCBI_GP:HJH9172040.1;Name=HJH9172040.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459810.1;locus_tag=O5C65_001918;product=outer membrane protein OmpX;protein_id=HJH9172040.1;transl_table=11 DALFDA020000011.1 tpg gene 86285 87172 . + . ID=gene-O5C65_001919;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=O5C65_001919 DALFDA020000011.1 Protein Homology CDS 86285 87172 . + 0 ID=cds-HJH9172041.1;Parent=gene-O5C65_001919;Dbxref=NCBI_GP:HJH9172041.1;Name=HJH9172041.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459809.1;locus_tag=O5C65_001919;product=threonine/homoserine exporter RhtA;protein_id=HJH9172041.1;transl_table=11 DALFDA020000011.1 tpg gene 87475 87978 . + . ID=gene-O5C65_001920;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=O5C65_001920 DALFDA020000011.1 Protein Homology CDS 87475 87978 . + 0 ID=cds-HJH9172042.1;Parent=gene-O5C65_001920;Dbxref=NCBI_GP:HJH9172042.1;Name=HJH9172042.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=O5C65_001920;product=DNA starvation/stationary phase protection protein Dps;protein_id=HJH9172042.1;transl_table=11 DALFDA020000011.1 tpg gene 88455 89201 . + . ID=gene-O5C65_001921;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=O5C65_001921 DALFDA020000011.1 Protein Homology CDS 88455 89201 . + 0 ID=cds-HJH9172043.1;Parent=gene-O5C65_001921;Dbxref=NCBI_GP:HJH9172043.1;Name=HJH9172043.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=O5C65_001921;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=HJH9172043.1;transl_table=11 DALFDA020000011.1 tpg gene 89347 90006 . + . ID=gene-O5C65_001922;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=O5C65_001922 DALFDA020000011.1 Protein Homology CDS 89347 90006 . + 0 ID=cds-HJH9172044.1;Parent=gene-O5C65_001922;Dbxref=NCBI_GP:HJH9172044.1;Name=HJH9172044.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=O5C65_001922;product=glutamine ABC transporter permease GlnP;protein_id=HJH9172044.1;transl_table=11 DALFDA020000011.1 tpg gene 90003 90725 . + . ID=gene-O5C65_001923;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=O5C65_001923 DALFDA020000011.1 Protein Homology CDS 90003 90725 . + 0 ID=cds-HJH9172045.1;Parent=gene-O5C65_001923;Dbxref=NCBI_GP:HJH9172045.1;Name=HJH9172045.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=O5C65_001923;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=HJH9172045.1;transl_table=11 DALFDA020000011.1 tpg gene 90844 93066 . + . ID=gene-O5C65_001924;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=O5C65_001924 DALFDA020000011.1 Protein Homology CDS 90844 93066 . + 0 ID=cds-HJH9172046.1;Parent=gene-O5C65_001924;Dbxref=NCBI_GP:HJH9172046.1;Name=HJH9172046.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459804.1;locus_tag=O5C65_001924;product=mechanosensitive channel protein;protein_id=HJH9172046.1;transl_table=11 DALFDA020000011.1 tpg gene 93063 93989 . - . ID=gene-O5C65_001925;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=O5C65_001925 DALFDA020000011.1 Protein Homology CDS 93063 93989 . - 0 ID=cds-HJH9172047.1;Parent=gene-O5C65_001925;Dbxref=NCBI_GP:HJH9172047.1;Name=HJH9172047.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459803.1;locus_tag=O5C65_001925;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=HJH9172047.1;transl_table=11 DALFDA020000011.1 tpg gene 94194 94460 . + . ID=gene-O5C65_001926;Name=O5C65_001926;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001926 DALFDA020000011.1 Protein Homology CDS 94194 94460 . + 0 ID=cds-HJH9172048.1;Parent=gene-O5C65_001926;Dbxref=NCBI_GP:HJH9172048.1;Name=HJH9172048.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459802.1;locus_tag=O5C65_001926;product=DksA/TraR family C4-type zinc finger protein;protein_id=HJH9172048.1;transl_table=11 DALFDA020000011.1 tpg gene 94745 95005 . + . ID=gene-O5C65_001927;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=O5C65_001927 DALFDA020000011.1 Protein Homology CDS 94745 95005 . + 0 ID=cds-HJH9172049.1;Parent=gene-O5C65_001927;Dbxref=NCBI_GP:HJH9172049.1;Name=HJH9172049.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459801.1;locus_tag=O5C65_001927;product=DUF1471 family protein YbiJ;protein_id=HJH9172049.1;transl_table=11 DALFDA020000011.1 tpg gene 95161 96135 . - . ID=gene-O5C65_001928;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=O5C65_001928 DALFDA020000011.1 Protein Homology CDS 95161 96135 . - 0 ID=cds-HJH9172050.1;Parent=gene-O5C65_001928;Dbxref=NCBI_GP:HJH9172050.1;Name=HJH9172050.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459800.1;locus_tag=O5C65_001928;product=DNA-binding protein YbiB;protein_id=HJH9172050.1;transl_table=11 DALFDA020000011.1 tpg gene 96165 98309 . - . ID=gene-O5C65_001929;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=O5C65_001929 DALFDA020000011.1 Protein Homology CDS 96165 98309 . - 0 ID=cds-HJH9172051.1;Parent=gene-O5C65_001929;Dbxref=NCBI_GP:HJH9172051.1;Name=HJH9172051.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459799.1;locus_tag=O5C65_001929;product=ATP-dependent DNA helicase DinG;protein_id=HJH9172051.1;transl_table=11 DALFDA020000011.1 tpg gene 98517 99875 . - . ID=gene-O5C65_001930;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=O5C65_001930 DALFDA020000011.1 Protein Homology CDS 98517 99875 . - 0 ID=cds-HJH9172052.1;Parent=gene-O5C65_001930;Dbxref=NCBI_GP:HJH9172052.1;Name=HJH9172052.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459798.1;locus_tag=O5C65_001930;product=ATP-dependent RNA helicase RhlE;protein_id=HJH9172052.1;transl_table=11 DALFDA020000011.1 tpg gene 100105 100779 . + . ID=gene-O5C65_001931;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=O5C65_001931 DALFDA020000011.1 Protein Homology CDS 100105 100779 . + 0 ID=cds-HJH9172053.1;Parent=gene-O5C65_001931;Dbxref=NCBI_GP:HJH9172053.1;Name=HJH9172053.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459797.1;locus_tag=O5C65_001931;product=transcriptional regulator CecR;protein_id=HJH9172053.1;transl_table=11 DALFDA020000011.1 tpg gene 100779 101774 . + . ID=gene-O5C65_001932;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=O5C65_001932 DALFDA020000011.1 Protein Homology CDS 100779 101774 . + 0 ID=cds-HJH9172054.1;Parent=gene-O5C65_001932;Dbxref=NCBI_GP:HJH9172054.1;Name=HJH9172054.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459796.1;locus_tag=O5C65_001932;product=secretion protein HlyD;protein_id=HJH9172054.1;transl_table=11 DALFDA020000011.1 tpg gene 101767 103503 . + . ID=gene-O5C65_001933;Name=O5C65_001933;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001933 DALFDA020000011.1 Protein Homology CDS 101767 103503 . + 0 ID=cds-HJH9172055.1;Parent=gene-O5C65_001933;Dbxref=NCBI_GP:HJH9172055.1;Name=HJH9172055.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459795.1;locus_tag=O5C65_001933;product=ATP-binding cassette domain-containing protein;protein_id=HJH9172055.1;transl_table=11 DALFDA020000011.1 tpg gene 103496 104626 . + . ID=gene-O5C65_001934;Name=O5C65_001934;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001934 DALFDA020000011.1 Protein Homology CDS 103496 104626 . + 0 ID=cds-HJH9172056.1;Parent=gene-O5C65_001934;Dbxref=NCBI_GP:HJH9172056.1;Name=HJH9172056.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459794.1;locus_tag=O5C65_001934;product=ABC transporter permease;protein_id=HJH9172056.1;transl_table=11 DALFDA020000011.1 tpg gene 104742 105848 . + . ID=gene-O5C65_001935;Name=O5C65_001935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001935 DALFDA020000011.1 Protein Homology CDS 104742 105848 . + 0 ID=cds-HJH9172057.1;Parent=gene-O5C65_001935;Dbxref=NCBI_GP:HJH9172057.1;Name=HJH9172057.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459793.1;locus_tag=O5C65_001935;product=ABC transporter permease;protein_id=HJH9172057.1;transl_table=11 DALFDA020000011.1 tpg gene 105810 106220 . - . ID=gene-O5C65_001936;Name=O5C65_001936;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001936 DALFDA020000011.1 Protein Homology CDS 105810 106220 . - 0 ID=cds-HJH9172058.1;Parent=gene-O5C65_001936;Dbxref=NCBI_GP:HJH9172058.1;Name=HJH9172058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459792.1;locus_tag=O5C65_001936;product=YbhQ family protein;protein_id=HJH9172058.1;transl_table=11 DALFDA020000011.1 tpg gene 106353 107111 . + . ID=gene-O5C65_001937;Name=O5C65_001937;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001937 DALFDA020000011.1 Protein Homology CDS 106353 107111 . + 0 ID=cds-HJH9172059.1;Parent=gene-O5C65_001937;Dbxref=NCBI_GP:HJH9172059.1;Name=HJH9172059.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459791.1;locus_tag=O5C65_001937;product=endonuclease/exonuclease/phosphatase family protein;protein_id=HJH9172059.1;transl_table=11 DALFDA020000011.1 tpg gene 107108 108349 . + . ID=gene-O5C65_001938;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=O5C65_001938 DALFDA020000011.1 Protein Homology CDS 107108 108349 . + 0 ID=cds-HJH9172060.1;Parent=gene-O5C65_001938;Dbxref=NCBI_GP:HJH9172060.1;Name=HJH9172060.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459790.1;locus_tag=O5C65_001938;product=cardiolipin synthase ClsB;protein_id=HJH9172060.1;transl_table=11 DALFDA020000011.1 tpg gene 108349 109311 . + . ID=gene-O5C65_001939;Name=O5C65_001939;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001939 DALFDA020000011.1 Protein Homology CDS 108349 109311 . + 0 ID=cds-HJH9172061.1;Parent=gene-O5C65_001939;Dbxref=NCBI_GP:HJH9172061.1;Name=HJH9172061.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459789.1;locus_tag=O5C65_001939;product=lysylphosphatidylglycerol synthase transmembrane domain-containing protein;protein_id=HJH9172061.1;transl_table=11 DALFDA020000011.1 tpg gene 109314 109874 . - . ID=gene-O5C65_001940;Name=O5C65_001940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001940 DALFDA020000011.1 Protein Homology CDS 109314 109874 . - 0 ID=cds-HJH9172062.1;Parent=gene-O5C65_001940;Dbxref=NCBI_GP:HJH9172062.1;Name=HJH9172062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459788.1;locus_tag=O5C65_001940;product=hypothetical protein;protein_id=HJH9172062.1;transl_table=11 DALFDA020000011.1 tpg gene 109882 110490 . - . ID=gene-O5C65_001941;Name=O5C65_001941;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001941 DALFDA020000011.1 Protein Homology CDS 109882 110490 . - 0 ID=cds-HJH9172063.1;Parent=gene-O5C65_001941;Dbxref=NCBI_GP:HJH9172063.1;Name=HJH9172063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459787.1;locus_tag=O5C65_001941;product=hypothetical protein;protein_id=HJH9172063.1;transl_table=11 DALFDA020000011.1 tpg gene 110514 111221 . - . ID=gene-O5C65_001942;Name=O5C65_001942;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001942 DALFDA020000011.1 Protein Homology CDS 110514 111221 . - 0 ID=cds-HJH9172064.1;Parent=gene-O5C65_001942;Dbxref=NCBI_GP:HJH9172064.1;Name=HJH9172064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459786.1;locus_tag=O5C65_001942;product=Bax inhibitor-1 family protein;protein_id=HJH9172064.1;transl_table=11 DALFDA020000011.1 tpg gene 111368 112072 . - . ID=gene-O5C65_001943;Name=O5C65_001943;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001943 DALFDA020000011.1 Protein Homology CDS 111368 112072 . - 0 ID=cds-HJH9172065.1;Parent=gene-O5C65_001943;Dbxref=NCBI_GP:HJH9172065.1;Name=HJH9172065.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459785.1;locus_tag=O5C65_001943;product=Bax inhibitor-1/YccA family protein;protein_id=HJH9172065.1;transl_table=11 DALFDA020000011.1 tpg gene 112120 112572 . - . ID=gene-O5C65_001944;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=O5C65_001944 DALFDA020000011.1 Protein Homology CDS 112120 112572 . - 0 ID=cds-HJH9172066.1;Parent=gene-O5C65_001944;Dbxref=NCBI_GP:HJH9172066.1;Name=HJH9172066.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459784.1;locus_tag=O5C65_001944;product=molybdopterin synthase catalytic subunit MoaE;protein_id=HJH9172066.1;transl_table=11 DALFDA020000011.1 tpg gene 112574 112819 . - . ID=gene-O5C65_001945;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=O5C65_001945 DALFDA020000011.1 Protein Homology CDS 112574 112819 . - 0 ID=cds-HJH9172067.1;Parent=gene-O5C65_001945;Dbxref=NCBI_GP:HJH9172067.1;Name=HJH9172067.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308889.1;locus_tag=O5C65_001945;product=molybdopterin synthase sulfur carrier subunit;protein_id=HJH9172067.1;transl_table=11 DALFDA020000011.1 tpg gene 112812 113297 . - . ID=gene-O5C65_001946;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=O5C65_001946 DALFDA020000011.1 Protein Homology CDS 112812 113297 . - 0 ID=cds-HJH9172068.1;Parent=gene-O5C65_001946;Dbxref=NCBI_GP:HJH9172068.1;Name=HJH9172068.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459782.1;locus_tag=O5C65_001946;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=HJH9172068.1;transl_table=11 DALFDA020000011.1 tpg gene 113300 113812 . - . ID=gene-O5C65_001947;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=O5C65_001947 DALFDA020000011.1 Protein Homology CDS 113300 113812 . - 0 ID=cds-HJH9172069.1;Parent=gene-O5C65_001947;Dbxref=NCBI_GP:HJH9172069.1;Name=HJH9172069.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=O5C65_001947;product=molybdenum cofactor biosynthesis protein B;protein_id=HJH9172069.1;transl_table=11 DALFDA020000011.1 tpg gene 113834 114823 . - . ID=gene-O5C65_001948;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=O5C65_001948 DALFDA020000011.1 Protein Homology CDS 113834 114823 . - 0 ID=cds-HJH9172070.1;Parent=gene-O5C65_001948;Dbxref=NCBI_GP:HJH9172070.1;Name=HJH9172070.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459780.1;locus_tag=O5C65_001948;product=GTP 3'%2C8-cyclase MoaA;protein_id=HJH9172070.1;transl_table=11 DALFDA020000011.1 cmsearch riboswitch 114811 114955 . - . ID=id-DALFDA020000011.1:114811..114955;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch DALFDA020000011.1 tpg gene 115220 116128 . + . ID=gene-O5C65_001949;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=O5C65_001949 DALFDA020000011.1 Protein Homology CDS 115220 116128 . + 0 ID=cds-HJH9172071.1;Parent=gene-O5C65_001949;Dbxref=NCBI_GP:HJH9172071.1;Name=HJH9172071.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459779.1;locus_tag=O5C65_001949;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=HJH9172071.1;transl_table=11 DALFDA020000011.1 tpg gene 116220 118517 . - . ID=gene-O5C65_001950;Name=slrP;gbkey=Gene;gene=slrP;gene_biotype=protein_coding;locus_tag=O5C65_001950 DALFDA020000011.1 Protein Homology CDS 116220 118517 . - 0 ID=cds-HJH9172072.1;Parent=gene-O5C65_001950;Dbxref=NCBI_GP:HJH9172072.1;Name=HJH9172072.1;gbkey=CDS;gene=slrP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459778.1;locus_tag=O5C65_001950;product=SPI-1 type III secretion system effector E3 ubiquitin transferase SlrP;protein_id=HJH9172072.1;transl_table=11 DALFDA020000011.1 tpg pseudogene 118525 118700 . - . ID=gene-O5C65_001951;Name=O5C65_001951;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_001951;pseudo=true DALFDA020000011.1 Protein Homology CDS 118525 118700 . - 0 ID=cds-O5C65_001951;Parent=gene-O5C65_001951;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447236.1;locus_tag=O5C65_001951;product=hypothetical protein;pseudo=true;transl_table=11 DALFDA020000011.1 tpg gene 119009 121030 . - . ID=gene-O5C65_001952;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=O5C65_001952 DALFDA020000011.1 Protein Homology CDS 119009 121030 . - 0 ID=cds-HJH9172073.1;Parent=gene-O5C65_001952;Dbxref=NCBI_GP:HJH9172073.1;Name=HJH9172073.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=O5C65_001952;product=excinuclease ABC subunit UvrB;protein_id=HJH9172073.1;transl_table=11 DALFDA020000011.1 tpg gene 121681 122367 . - . ID=gene-O5C65_001953;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=O5C65_001953 DALFDA020000011.1 Protein Homology CDS 121681 122367 . - 0 ID=cds-HJH9172074.1;Parent=gene-O5C65_001953;Dbxref=NCBI_GP:HJH9172074.1;Name=HJH9172074.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459775.1;locus_tag=O5C65_001953;product=dethiobiotin synthase;protein_id=HJH9172074.1;transl_table=11 DALFDA020000011.1 tpg gene 122360 123115 . - . ID=gene-O5C65_001954;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=O5C65_001954 DALFDA020000011.1 Protein Homology CDS 122360 123115 . - 0 ID=cds-HJH9172075.1;Parent=gene-O5C65_001954;Dbxref=NCBI_GP:HJH9172075.1;Name=HJH9172075.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459774.1;locus_tag=O5C65_001954;product=malonyl-ACP O-methyltransferase BioC;protein_id=HJH9172075.1;transl_table=11 DALFDA020000011.1 tpg gene 123099 124256 . - . ID=gene-O5C65_001955;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=O5C65_001955 DALFDA020000011.1 Protein Homology CDS 123099 124256 . - 0 ID=cds-HJH9172076.1;Parent=gene-O5C65_001955;Dbxref=NCBI_GP:HJH9172076.1;Name=HJH9172076.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459773.1;locus_tag=O5C65_001955;product=8-amino-7-oxononanoate synthase;protein_id=HJH9172076.1;transl_table=11 DALFDA020000011.1 tpg gene 124253 125293 . - . ID=gene-O5C65_001956;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=O5C65_001956 DALFDA020000011.1 Protein Homology CDS 124253 125293 . - 0 ID=cds-HJH9172077.1;Parent=gene-O5C65_001956;Dbxref=NCBI_GP:HJH9172077.1;Name=HJH9172077.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459772.1;locus_tag=O5C65_001956;product=biotin synthase BioB;protein_id=HJH9172077.1;transl_table=11 DALFDA020000011.1 tpg gene 125380 126669 . + . ID=gene-O5C65_001957;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=O5C65_001957 DALFDA020000011.1 Protein Homology CDS 125380 126669 . + 0 ID=cds-HJH9172078.1;Parent=gene-O5C65_001957;Dbxref=NCBI_GP:HJH9172078.1;Name=HJH9172078.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459771.1;locus_tag=O5C65_001957;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=HJH9172078.1;transl_table=11 DALFDA020000011.1 tpg gene 126727 127203 . + . ID=gene-O5C65_001958;Name=O5C65_001958;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001958 DALFDA020000011.1 Protein Homology CDS 126727 127203 . + 0 ID=cds-HJH9172079.1;Parent=gene-O5C65_001958;Dbxref=NCBI_GP:HJH9172079.1;Name=HJH9172079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459770.1;locus_tag=O5C65_001958;product=kinase inhibitor;protein_id=HJH9172079.1;transl_table=11 DALFDA020000011.1 tpg gene 127288 128808 . - . ID=gene-O5C65_001959;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=O5C65_001959 DALFDA020000011.1 Protein Homology CDS 127288 128808 . - 0 ID=cds-HJH9172080.1;Parent=gene-O5C65_001959;Dbxref=NCBI_GP:HJH9172080.1;Name=HJH9172080.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459769.1;locus_tag=O5C65_001959;product=histidine ammonia-lyase;protein_id=HJH9172080.1;transl_table=11 DALFDA020000011.1 tpg gene 128810 130495 . - . ID=gene-O5C65_001960;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=O5C65_001960 DALFDA020000011.1 Protein Homology CDS 128810 130495 . - 0 ID=cds-HJH9172081.1;Parent=gene-O5C65_001960;Dbxref=NCBI_GP:HJH9172081.1;Name=HJH9172081.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441920.1;locus_tag=O5C65_001960;product=urocanate hydratase;protein_id=HJH9172081.1;transl_table=11 DALFDA020000011.1 tpg gene 130692 131417 . - . ID=gene-O5C65_001961;Name=O5C65_001961;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001961 DALFDA020000011.1 Protein Homology CDS 130692 131417 . - 0 ID=cds-HJH9172082.1;Parent=gene-O5C65_001961;Dbxref=NCBI_GP:HJH9172082.1;Name=HJH9172082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459768.1;locus_tag=O5C65_001961;product=histidine utilization repressor;protein_id=HJH9172082.1;transl_table=11 DALFDA020000011.1 tpg gene 131462 132403 . - . ID=gene-O5C65_001962;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=O5C65_001962 DALFDA020000011.1 Protein Homology CDS 131462 132403 . - 0 ID=cds-HJH9172083.1;Parent=gene-O5C65_001962;Dbxref=NCBI_GP:HJH9172083.1;Name=HJH9172083.1;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459767.1;locus_tag=O5C65_001962;product=formimidoylglutamase;protein_id=HJH9172083.1;transl_table=11 DALFDA020000011.1 tpg gene 132400 133623 . - . ID=gene-O5C65_001963;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=O5C65_001963 DALFDA020000011.1 Protein Homology CDS 132400 133623 . - 0 ID=cds-HJH9172084.1;Parent=gene-O5C65_001963;Dbxref=NCBI_GP:HJH9172084.1;Name=HJH9172084.1;Ontology_term=GO:0019556,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459766.1;locus_tag=O5C65_001963;product=imidazolonepropionase;protein_id=HJH9172084.1;transl_table=11 DALFDA020000011.1 tpg gene 133861 135144 . + . ID=gene-O5C65_001964;Name=O5C65_001964;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001964 DALFDA020000011.1 Protein Homology CDS 133861 135144 . + 0 ID=cds-HJH9172085.1;Parent=gene-O5C65_001964;Dbxref=NCBI_GP:HJH9172085.1;Name=HJH9172085.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459765.1;locus_tag=O5C65_001964;product=putative acyl-CoA thioester hydrolase;protein_id=HJH9172085.1;transl_table=11 DALFDA020000011.1 tpg gene 135205 137463 . - . ID=gene-O5C65_001965;Name=O5C65_001965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001965 DALFDA020000011.1 Protein Homology CDS 135205 137463 . - 0 ID=cds-HJH9172086.1;Parent=gene-O5C65_001965;Dbxref=NCBI_GP:HJH9172086.1;Name=HJH9172086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000258265.1;locus_tag=O5C65_001965;product=hydratase;protein_id=HJH9172086.1;transl_table=11 DALFDA020000011.1 tpg gene 137566 138999 . - . ID=gene-O5C65_001966;Name=O5C65_001966;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001966 DALFDA020000011.1 Protein Homology CDS 137566 138999 . - 0 ID=cds-HJH9172087.1;Parent=gene-O5C65_001966;Dbxref=NCBI_GP:HJH9172087.1;Name=HJH9172087.1;Ontology_term=GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415291.1;locus_tag=O5C65_001966;product=anion permease;protein_id=HJH9172087.1;transl_table=11 DALFDA020000011.1 tpg gene 139082 140137 . - . ID=gene-O5C65_001967;Name=O5C65_001967;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001967 DALFDA020000011.1 Protein Homology CDS 139082 140137 . - 0 ID=cds-HJH9172088.1;Parent=gene-O5C65_001967;Dbxref=NCBI_GP:HJH9172088.1;Name=HJH9172088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000723616.1;locus_tag=O5C65_001967;product=4-oxalomesaconate tautomerase;protein_id=HJH9172088.1;transl_table=11 DALFDA020000011.1 tpg gene 140336 141268 . + . ID=gene-O5C65_001968;Name=O5C65_001968;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001968 DALFDA020000011.1 Protein Homology CDS 140336 141268 . + 0 ID=cds-HJH9172089.1;Parent=gene-O5C65_001968;Dbxref=NCBI_GP:HJH9172089.1;Name=HJH9172089.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632852.1;locus_tag=O5C65_001968;product=LysR family transcriptional regulator;protein_id=HJH9172089.1;transl_table=11 DALFDA020000011.1 tpg gene 141381 142376 . - . ID=gene-O5C65_001969;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=O5C65_001969 DALFDA020000011.1 Protein Homology CDS 141381 142376 . - 0 ID=cds-HJH9172090.1;Parent=gene-O5C65_001969;Dbxref=NCBI_GP:HJH9172090.1;Name=HJH9172090.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459764.1;locus_tag=O5C65_001969;product=6-phosphogluconolactonase;protein_id=HJH9172090.1;transl_table=11 DALFDA020000011.1 tpg gene 142540 143358 . + . ID=gene-O5C65_001970;Name=O5C65_001970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001970 DALFDA020000011.1 Protein Homology CDS 142540 143358 . + 0 ID=cds-HJH9172091.1;Parent=gene-O5C65_001970;Dbxref=NCBI_GP:HJH9172091.1;Name=HJH9172091.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459763.1;locus_tag=O5C65_001970;product=pyridoxal phosphatase;protein_id=HJH9172091.1;transl_table=11 DALFDA020000011.1 tpg gene 143359 144417 . - . ID=gene-O5C65_001971;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=O5C65_001971 DALFDA020000011.1 Protein Homology CDS 143359 144417 . - 0 ID=cds-HJH9172092.1;Parent=gene-O5C65_001971;Dbxref=NCBI_GP:HJH9172092.1;Name=HJH9172092.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459762.1;locus_tag=O5C65_001971;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=HJH9172092.1;transl_table=11 DALFDA020000011.1 tpg gene 144420 145109 . - . ID=gene-O5C65_001972;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=O5C65_001972 DALFDA020000011.1 Protein Homology CDS 144420 145109 . - 0 ID=cds-HJH9172093.1;Parent=gene-O5C65_001972;Dbxref=NCBI_GP:HJH9172093.1;Name=HJH9172093.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459761.1;locus_tag=O5C65_001972;product=molybdate ABC transporter permease subunit;protein_id=HJH9172093.1;transl_table=11 DALFDA020000011.1 tpg gene 145109 145882 . - . ID=gene-O5C65_001973;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=O5C65_001973 DALFDA020000011.1 Protein Homology CDS 145109 145882 . - 0 ID=cds-HJH9172094.1;Parent=gene-O5C65_001973;Dbxref=NCBI_GP:HJH9172094.1;Name=HJH9172094.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459760.1;locus_tag=O5C65_001973;product=molybdate ABC transporter substrate-binding protein;protein_id=HJH9172094.1;transl_table=11 DALFDA020000011.1 tpg gene 146049 146198 . - . ID=gene-O5C65_001974;Name=O5C65_001974;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001974 DALFDA020000011.1 Protein Homology CDS 146049 146198 . - 0 ID=cds-HJH9172095.1;Parent=gene-O5C65_001974;Dbxref=NCBI_GP:HJH9172095.1;Name=HJH9172095.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459759.1;locus_tag=O5C65_001974;product=AcrZ family multidrug efflux pump-associated protein;protein_id=HJH9172095.1;transl_table=11 DALFDA020000011.1 tpg gene 146327 147115 . + . ID=gene-O5C65_001975;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=O5C65_001975 DALFDA020000011.1 Protein Homology CDS 146327 147115 . + 0 ID=cds-HJH9172096.1;Parent=gene-O5C65_001975;Dbxref=NCBI_GP:HJH9172096.1;Name=HJH9172096.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459758.1;locus_tag=O5C65_001975;product=molybdenum-dependent transcriptional regulator;protein_id=HJH9172096.1;transl_table=11 DALFDA020000011.1 tpg gene 147183 148658 . + . ID=gene-O5C65_001976;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=O5C65_001976 DALFDA020000011.1 Protein Homology CDS 147183 148658 . + 0 ID=cds-HJH9172097.1;Parent=gene-O5C65_001976;Dbxref=NCBI_GP:HJH9172097.1;Name=HJH9172097.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459757.1;locus_tag=O5C65_001976;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=HJH9172097.1;transl_table=11 DALFDA020000011.1 tpg gene 148829 149737 . + . ID=gene-O5C65_001977;Name=O5C65_001977;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001977 DALFDA020000011.1 Protein Homology CDS 148829 149737 . + 0 ID=cds-HJH9172098.1;Parent=gene-O5C65_001977;Dbxref=NCBI_GP:HJH9172098.1;Name=HJH9172098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459756.1;locus_tag=O5C65_001977;product=DUF2167 domain-containing protein;protein_id=HJH9172098.1;transl_table=11 DALFDA020000011.1 tpg gene 149959 150975 . + . ID=gene-O5C65_001978;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=O5C65_001978 DALFDA020000011.1 Protein Homology CDS 149959 150975 . + 0 ID=cds-HJH9172099.1;Parent=gene-O5C65_001978;Dbxref=NCBI_GP:HJH9172099.1;Name=HJH9172099.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459755.1;locus_tag=O5C65_001978;product=UDP-glucose 4-epimerase GalE;protein_id=HJH9172099.1;transl_table=11 DALFDA020000011.1 tpg gene 150986 152032 . + . ID=gene-O5C65_001979;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=O5C65_001979 DALFDA020000011.1 Protein Homology CDS 150986 152032 . + 0 ID=cds-HJH9172100.1;Parent=gene-O5C65_001979;Dbxref=NCBI_GP:HJH9172100.1;Name=HJH9172100.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459754.1;locus_tag=O5C65_001979;product=galactose-1-phosphate uridylyltransferase;protein_id=HJH9172100.1;transl_table=11 DALFDA020000011.1 tpg gene 152035 153183 . + . ID=gene-O5C65_001980;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=O5C65_001980 DALFDA020000011.1 Protein Homology CDS 152035 153183 . + 0 ID=cds-HJH9172101.1;Parent=gene-O5C65_001980;Dbxref=NCBI_GP:HJH9172101.1;Name=HJH9172101.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=O5C65_001980;product=galactokinase;protein_id=HJH9172101.1;transl_table=11 DALFDA020000011.1 tpg gene 153177 154217 . + . ID=gene-O5C65_001981;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=O5C65_001981 DALFDA020000011.1 Protein Homology CDS 153177 154217 . + 0 ID=cds-HJH9172102.1;Parent=gene-O5C65_001981;Dbxref=NCBI_GP:HJH9172102.1;Name=HJH9172102.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459752.1;locus_tag=O5C65_001981;product=galactose-1-epimerase;protein_id=HJH9172102.1;transl_table=11 DALFDA020000011.1 tpg gene 154441 155193 . + . ID=gene-O5C65_001982;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=O5C65_001982 DALFDA020000011.1 Protein Homology CDS 154441 155193 . + 0 ID=cds-HJH9172103.1;Parent=gene-O5C65_001982;Dbxref=NCBI_GP:HJH9172103.1;Name=HJH9172103.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=O5C65_001982;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=HJH9172103.1;transl_table=11 DALFDA020000011.1 tpg gene 155284 156060 . - . ID=gene-O5C65_001983;Name=O5C65_001983;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001983 DALFDA020000011.1 Protein Homology CDS 155284 156060 . - 0 ID=cds-HJH9172104.1;Parent=gene-O5C65_001983;Dbxref=NCBI_GP:HJH9172104.1;Name=HJH9172104.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459750.1;locus_tag=O5C65_001983;product=ABC transporter ATP-binding protein;protein_id=HJH9172104.1;transl_table=11 DALFDA020000011.1 tpg gene 156060 157139 . - . ID=gene-O5C65_001984;Name=O5C65_001984;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001984 DALFDA020000011.1 Protein Homology CDS 156060 157139 . - 0 ID=cds-HJH9172105.1;Parent=gene-O5C65_001984;Dbxref=NCBI_GP:HJH9172105.1;Name=HJH9172105.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459749.1;locus_tag=O5C65_001984;product=FecCD family ABC transporter permease;protein_id=HJH9172105.1;transl_table=11 DALFDA020000011.1 tpg gene 157293 158345 . - . ID=gene-O5C65_001985;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=O5C65_001985 DALFDA020000011.1 Protein Homology CDS 157293 158345 . - 0 ID=cds-HJH9172106.1;Parent=gene-O5C65_001985;Dbxref=NCBI_GP:HJH9172106.1;Name=HJH9172106.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=O5C65_001985;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=HJH9172106.1;transl_table=11 DALFDA020000011.1 tpg gene 158665 159051 . + . ID=gene-O5C65_001986;Name=O5C65_001986;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_001986 DALFDA020000011.1 Protein Homology CDS 158665 159051 . + 0 ID=cds-HJH9172107.1;Parent=gene-O5C65_001986;Dbxref=NCBI_GP:HJH9172107.1;Name=HJH9172107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459739.1;locus_tag=O5C65_001986;product=YbgS-like family protein;protein_id=HJH9172107.1;transl_table=11 DALFDA020000011.1 tpg gene 159162 160100 . + . ID=gene-O5C65_001987;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=O5C65_001987 DALFDA020000011.1 Protein Homology CDS 159162 160100 . + 0 ID=cds-HJH9172108.1;Parent=gene-O5C65_001987;Dbxref=NCBI_GP:HJH9172108.1;Name=HJH9172108.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459738.1;locus_tag=O5C65_001987;product=CDF family zinc transporter ZitB;protein_id=HJH9172108.1;transl_table=11 DALFDA020000011.1 tpg gene 160097 160816 . - . ID=gene-O5C65_001988;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=O5C65_001988 DALFDA020000011.1 Protein Homology CDS 160097 160816 . - 0 ID=cds-HJH9172109.1;Parent=gene-O5C65_001988;Dbxref=NCBI_GP:HJH9172109.1;Name=HJH9172109.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459737.1;locus_tag=O5C65_001988;product=nicotinamide riboside transporter PnuC;protein_id=HJH9172109.1;transl_table=11 DALFDA020000011.1 tpg gene 160841 161884 . - . ID=gene-O5C65_001989;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=O5C65_001989 DALFDA020000011.1 Protein Homology CDS 160841 161884 . - 0 ID=cds-HJH9172110.1;Parent=gene-O5C65_001989;Dbxref=NCBI_GP:HJH9172110.1;Name=HJH9172110.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459736.1;locus_tag=O5C65_001989;product=quinolinate synthase NadA;protein_id=HJH9172110.1;transl_table=11 DALFDA020000011.1 tpg gene 162178 162305 . - . ID=gene-O5C65_001990;Name=O5C65_001990;gbkey=Gene;gene_biotype=ncRNA;locus_tag=O5C65_001990 DALFDA020000011.1 cmsearch ncRNA 162178 162305 . - . ID=rna-O5C65_001990;Parent=gene-O5C65_001990;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_001990;product=RtT sRNA DALFDA020000011.1 cmsearch exon 162178 162305 . - . ID=exon-O5C65_001990-1;Parent=rna-O5C65_001990;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_001990;product=RtT sRNA ##sequence-region DALFDA020000012.1 1 161900 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000012.1 tpg region 1 161900 . + . ID=DALFDA020000012.1:1..161900;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000012.1 tpg gene 1 495 . - . ID=gene-O5C65_001991;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=O5C65_001991;partial=true;start_range=.,1 DALFDA020000012.1 Protein Homology CDS 1 495 . - 0 ID=cds-HJH9172111.1;Parent=gene-O5C65_001991;Dbxref=NCBI_GP:HJH9172111.1;Name=HJH9172111.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707933.1;locus_tag=O5C65_001991;partial=true;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=HJH9172111.1;start_range=.,1;transl_table=11 DALFDA020000012.1 tpg gene 500 1378 . - . ID=gene-O5C65_001992;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=O5C65_001992 DALFDA020000012.1 Protein Homology CDS 500 1378 . - 0 ID=cds-HJH9172112.1;Parent=gene-O5C65_001992;Dbxref=NCBI_GP:HJH9172112.1;Name=HJH9172112.1;Ontology_term=GO:0000271,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000857511.1;locus_tag=O5C65_001992;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=HJH9172112.1;transl_table=11 DALFDA020000012.1 tpg gene 1426 2325 . - . ID=gene-O5C65_001993;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=O5C65_001993 DALFDA020000012.1 Protein Homology CDS 1426 2325 . - 0 ID=cds-HJH9172113.1;Parent=gene-O5C65_001993;Dbxref=NCBI_GP:HJH9172113.1;Name=HJH9172113.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461041.1;locus_tag=O5C65_001993;product=dTDP-4-dehydrorhamnose reductase;protein_id=HJH9172113.1;transl_table=11 DALFDA020000012.1 tpg gene 2325 3410 . - . ID=gene-O5C65_001994;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=O5C65_001994 DALFDA020000012.1 Protein Homology CDS 2325 3410 . - 0 ID=cds-HJH9172114.1;Parent=gene-O5C65_001994;Dbxref=NCBI_GP:HJH9172114.1;Name=HJH9172114.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461042.1;locus_tag=O5C65_001994;product=dTDP-glucose 4%2C6-dehydratase;protein_id=HJH9172114.1;transl_table=11 DALFDA020000012.1 tpg gene 3787 4680 . - . ID=gene-O5C65_001995;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=O5C65_001995 DALFDA020000012.1 Protein Homology CDS 3787 4680 . - 0 ID=cds-HJH9172115.1;Parent=gene-O5C65_001995;Dbxref=NCBI_GP:HJH9172115.1;Name=HJH9172115.1;Ontology_term=GO:0006011,GO:0030234;gbkey=CDS;gene=galF;go_function=enzyme regulator activity|0030234||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461043.1;locus_tag=O5C65_001995;product=GalU regulator GalF;protein_id=HJH9172115.1;transl_table=11 DALFDA020000012.1 tpg gene 4858 6261 . - . ID=gene-O5C65_001996;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=O5C65_001996 DALFDA020000012.1 Protein Homology CDS 4858 6261 . - 0 ID=cds-HJH9172116.1;Parent=gene-O5C65_001996;Dbxref=NCBI_GP:HJH9172116.1;Name=HJH9172116.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461044.1;locus_tag=O5C65_001996;product=colanic acid biosynthesis protein WcaM;protein_id=HJH9172116.1;transl_table=11 DALFDA020000012.1 tpg gene 6272 7492 . - . ID=gene-O5C65_001997;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=O5C65_001997 DALFDA020000012.1 Protein Homology CDS 6272 7492 . - 0 ID=cds-HJH9172117.1;Parent=gene-O5C65_001997;Dbxref=NCBI_GP:HJH9172117.1;Name=HJH9172117.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461045.1;locus_tag=O5C65_001997;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=HJH9172117.1;transl_table=11 DALFDA020000012.1 tpg gene 7489 8769 . - . ID=gene-O5C65_001998;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=O5C65_001998 DALFDA020000012.1 Protein Homology CDS 7489 8769 . - 0 ID=cds-HJH9172118.1;Parent=gene-O5C65_001998;Dbxref=NCBI_GP:HJH9172118.1;Name=HJH9172118.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=O5C65_001998;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=HJH9172118.1;transl_table=11 DALFDA020000012.1 tpg gene 8791 10269 . - . ID=gene-O5C65_001999;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=O5C65_001999 DALFDA020000012.1 Protein Homology CDS 8791 10269 . - 0 ID=cds-HJH9172119.1;Parent=gene-O5C65_001999;Dbxref=NCBI_GP:HJH9172119.1;Name=HJH9172119.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461047.1;locus_tag=O5C65_001999;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=HJH9172119.1;transl_table=11 DALFDA020000012.1 tpg gene 10371 11765 . - . ID=gene-O5C65_002000;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=O5C65_002000 DALFDA020000012.1 Protein Homology CDS 10371 11765 . - 0 ID=cds-HJH9172120.1;Parent=gene-O5C65_002000;Dbxref=NCBI_GP:HJH9172120.1;Name=HJH9172120.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461048.1;locus_tag=O5C65_002000;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=HJH9172120.1;transl_table=11 DALFDA020000012.1 tpg gene 11819 13189 . - . ID=gene-O5C65_002001;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=O5C65_002001 DALFDA020000012.1 Protein Homology CDS 11819 13189 . - 0 ID=cds-HJH9172121.1;Parent=gene-O5C65_002001;Dbxref=NCBI_GP:HJH9172121.1;Name=HJH9172121.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461049.1;locus_tag=O5C65_002001;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=HJH9172121.1;transl_table=11 DALFDA020000012.1 tpg gene 13300 14742 . - . ID=gene-O5C65_002002;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=O5C65_002002 DALFDA020000012.1 Protein Homology CDS 13300 14742 . - 0 ID=cds-HJH9172122.1;Parent=gene-O5C65_002002;Dbxref=NCBI_GP:HJH9172122.1;Name=HJH9172122.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461050.3;locus_tag=O5C65_002002;product=mannose-1-phosphate guanyltransferase;protein_id=HJH9172122.1;transl_table=11 DALFDA020000012.1 tpg gene 14739 15962 . - . ID=gene-O5C65_002003;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=O5C65_002003 DALFDA020000012.1 Protein Homology CDS 14739 15962 . - 0 ID=cds-HJH9172123.1;Parent=gene-O5C65_002003;Dbxref=NCBI_GP:HJH9172123.1;Name=HJH9172123.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461051.1;locus_tag=O5C65_002003;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=HJH9172123.1;transl_table=11 DALFDA020000012.1 tpg gene 15959 16432 . - . ID=gene-O5C65_002004;Name=O5C65_002004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002004 DALFDA020000012.1 Protein Homology CDS 15959 16432 . - 0 ID=cds-HJH9172124.1;Parent=gene-O5C65_002004;Dbxref=NCBI_GP:HJH9172124.1;Name=HJH9172124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526160.1;locus_tag=O5C65_002004;product=GDP-mannose mannosyl hydrolase;protein_id=HJH9172124.1;transl_table=11 DALFDA020000012.1 tpg gene 16435 17400 . - . ID=gene-O5C65_002005;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=protein_coding;gene_synonym=wcaG,yefB;locus_tag=O5C65_002005 DALFDA020000012.1 Protein Homology CDS 16435 17400 . - 0 ID=cds-HJH9172125.1;Parent=gene-O5C65_002005;Dbxref=NCBI_GP:HJH9172125.1;Name=HJH9172125.1;Ontology_term=GO:0042351,GO:0016853,GO:0050577;gbkey=CDS;gene=fcl;go_function=isomerase activity|0016853||IEA,GDP-L-fucose synthase activity|0050577||IEA;go_process='de novo' GDP-L-fucose biosynthetic process|0042351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461053.1;locus_tag=O5C65_002005;product=GDP-L-fucose synthase;protein_id=HJH9172125.1;transl_table=11 DALFDA020000012.1 tpg gene 17403 18524 . - . ID=gene-O5C65_002006;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=O5C65_002006 DALFDA020000012.1 Protein Homology CDS 17403 18524 . - 0 ID=cds-HJH9172126.1;Parent=gene-O5C65_002006;Dbxref=NCBI_GP:HJH9172126.1;Name=HJH9172126.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=O5C65_002006;product=GDP-mannose 4%2C6-dehydratase;protein_id=HJH9172126.1;transl_table=11 DALFDA020000012.1 tpg gene 18548 19102 . - . ID=gene-O5C65_002007;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=O5C65_002007 DALFDA020000012.1 Protein Homology CDS 18548 19102 . - 0 ID=cds-HJH9172127.1;Parent=gene-O5C65_002007;Dbxref=NCBI_GP:HJH9172127.1;Name=HJH9172127.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461055.1;locus_tag=O5C65_002007;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=HJH9172127.1;transl_table=11 DALFDA020000012.1 tpg gene 19118 19864 . - . ID=gene-O5C65_002008;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=O5C65_002008 DALFDA020000012.1 Protein Homology CDS 19118 19864 . - 0 ID=cds-HJH9172128.1;Parent=gene-O5C65_002008;Dbxref=NCBI_GP:HJH9172128.1;Name=HJH9172128.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461056.1;locus_tag=O5C65_002008;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=HJH9172128.1;transl_table=11 DALFDA020000012.1 tpg gene 19877 21091 . - . ID=gene-O5C65_002009;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=O5C65_002009 DALFDA020000012.1 Protein Homology CDS 19877 21091 . - 0 ID=cds-HJH9172129.1;Parent=gene-O5C65_002009;Dbxref=NCBI_GP:HJH9172129.1;Name=HJH9172129.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461057.1;locus_tag=O5C65_002009;product=colanic acid polymerase WcaD;protein_id=HJH9172129.1;transl_table=11 DALFDA020000012.1 tpg gene 21066 22283 . - . ID=gene-O5C65_002010;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=O5C65_002010 DALFDA020000012.1 Protein Homology CDS 21066 22283 . - 0 ID=cds-HJH9172130.1;Parent=gene-O5C65_002010;Dbxref=NCBI_GP:HJH9172130.1;Name=HJH9172130.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461058.1;locus_tag=O5C65_002010;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=HJH9172130.1;transl_table=11 DALFDA020000012.1 tpg gene 22280 22768 . - . ID=gene-O5C65_002011;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=O5C65_002011 DALFDA020000012.1 Protein Homology CDS 22280 22768 . - 0 ID=cds-HJH9172131.1;Parent=gene-O5C65_002011;Dbxref=NCBI_GP:HJH9172131.1;Name=HJH9172131.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461059.1;locus_tag=O5C65_002011;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=HJH9172131.1;transl_table=11 DALFDA020000012.1 tpg gene 22771 23613 . - . ID=gene-O5C65_002012;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=O5C65_002012 DALFDA020000012.1 Protein Homology CDS 22771 23613 . - 0 ID=cds-HJH9172132.1;Parent=gene-O5C65_002012;Dbxref=NCBI_GP:HJH9172132.1;Name=HJH9172132.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=O5C65_002012;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=HJH9172132.1;transl_table=11 DALFDA020000012.1 tpg gene 23700 25859 . - . ID=gene-O5C65_002013;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=O5C65_002013 DALFDA020000012.1 Protein Homology CDS 23700 25859 . - 0 ID=cds-HJH9172133.1;Parent=gene-O5C65_002013;Dbxref=NCBI_GP:HJH9172133.1;Name=HJH9172133.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461061.1;locus_tag=O5C65_002013;product=tyrosine-protein kinase Wzc;protein_id=HJH9172133.1;transl_table=11 DALFDA020000012.1 tpg gene 25856 26305 . - . ID=gene-O5C65_002014;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=O5C65_002014 DALFDA020000012.1 Protein Homology CDS 25856 26305 . - 0 ID=cds-HJH9172134.1;Parent=gene-O5C65_002014;Dbxref=NCBI_GP:HJH9172134.1;Name=HJH9172134.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461062.1;locus_tag=O5C65_002014;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=HJH9172134.1;transl_table=11 DALFDA020000012.1 tpg gene 26311 27450 . - . ID=gene-O5C65_002015;Name=O5C65_002015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002015 DALFDA020000012.1 Protein Homology CDS 26311 27450 . - 0 ID=cds-HJH9172135.1;Parent=gene-O5C65_002015;Dbxref=NCBI_GP:HJH9172135.1;Name=HJH9172135.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461063.1;locus_tag=O5C65_002015;product=polysaccharide export protein;protein_id=HJH9172135.1;transl_table=11 DALFDA020000012.1 tpg gene 28125 29705 . + . ID=gene-O5C65_002016;Name=O5C65_002016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002016 DALFDA020000012.1 Protein Homology CDS 28125 29705 . + 0 ID=cds-HJH9172136.1;Parent=gene-O5C65_002016;Dbxref=NCBI_GP:HJH9172136.1;Name=HJH9172136.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461064.1;locus_tag=O5C65_002016;product=TerC family protein;protein_id=HJH9172136.1;transl_table=11 DALFDA020000012.1 tpg gene 29791 31647 . - . ID=gene-O5C65_002017;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=O5C65_002017 DALFDA020000012.1 Protein Homology CDS 29791 31647 . - 0 ID=cds-HJH9172137.1;Parent=gene-O5C65_002017;Dbxref=NCBI_GP:HJH9172137.1;Name=HJH9172137.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461065.1;locus_tag=O5C65_002017;product=outer membrane assembly protein AsmA;protein_id=HJH9172137.1;transl_table=11 DALFDA020000012.1 tpg gene 31686 32267 . - . ID=gene-O5C65_002018;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=O5C65_002018 DALFDA020000012.1 Protein Homology CDS 31686 32267 . - 0 ID=cds-HJH9172138.1;Parent=gene-O5C65_002018;Dbxref=NCBI_GP:HJH9172138.1;Name=HJH9172138.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=O5C65_002018;product=dCTP deaminase;protein_id=HJH9172138.1;transl_table=11 DALFDA020000012.1 tpg gene 32358 32999 . - . ID=gene-O5C65_002019;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=O5C65_002019 DALFDA020000012.1 Protein Homology CDS 32358 32999 . - 0 ID=cds-HJH9172139.1;Parent=gene-O5C65_002019;Dbxref=NCBI_GP:HJH9172139.1;Name=HJH9172139.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461067.1;locus_tag=O5C65_002019;product=uridine kinase;protein_id=HJH9172139.1;transl_table=11 DALFDA020000012.1 tpg gene 33330 36320 . + . ID=gene-O5C65_002020;Name=O5C65_002020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002020 DALFDA020000012.1 Protein Homology CDS 33330 36320 . + 0 ID=cds-HJH9172140.1;Parent=gene-O5C65_002020;Dbxref=NCBI_GP:HJH9172140.1;Name=HJH9172140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461068.1;locus_tag=O5C65_002020;product=MASE1 domain-containing protein;protein_id=HJH9172140.1;transl_table=11 DALFDA020000012.1 tpg gene 36288 37157 . - . ID=gene-O5C65_002021;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=O5C65_002021 DALFDA020000012.1 Protein Homology CDS 36288 37157 . - 0 ID=cds-HJH9172141.1;Parent=gene-O5C65_002021;Dbxref=NCBI_GP:HJH9172141.1;Name=HJH9172141.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461069.1;locus_tag=O5C65_002021;product=DNA-3-methyladenine glycosylase 2;protein_id=HJH9172141.1;transl_table=11 DALFDA020000012.1 tpg gene 37291 38643 . + . ID=gene-O5C65_002022;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=O5C65_002022 DALFDA020000012.1 Protein Homology CDS 37291 38643 . + 0 ID=cds-HJH9172142.1;Parent=gene-O5C65_002022;Dbxref=NCBI_GP:HJH9172142.1;Name=HJH9172142.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461070.1;locus_tag=O5C65_002022;product=molecular chaperone;protein_id=HJH9172142.1;transl_table=11 DALFDA020000012.1 tpg gene 38742 38801 . - . ID=gene-O5C65_002023;Name=O5C65_002023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002023 DALFDA020000012.1 Protein Homology CDS 38742 38801 . - 0 ID=cds-HJH9172143.1;Parent=gene-O5C65_002023;Dbxref=NCBI_GP:HJH9172143.1;Name=HJH9172143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=O5C65_002023;product=type I toxin-antitoxin system Ibs family toxin;protein_id=HJH9172143.1;transl_table=11 DALFDA020000012.1 tpg gene 39084 40325 . + . ID=gene-O5C65_002024;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=O5C65_002024 DALFDA020000012.1 Protein Homology CDS 39084 40325 . + 0 ID=cds-HJH9172144.1;Parent=gene-O5C65_002024;Dbxref=NCBI_GP:HJH9172144.1;Name=HJH9172144.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461071.1;locus_tag=O5C65_002024;product=multidrug efflux RND transporter subunit MdtA;protein_id=HJH9172144.1;transl_table=11 DALFDA020000012.1 tpg gene 40325 43447 . + . ID=gene-O5C65_002025;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=O5C65_002025 DALFDA020000012.1 Protein Homology CDS 40325 43447 . + 0 ID=cds-HJH9172145.1;Parent=gene-O5C65_002025;Dbxref=NCBI_GP:HJH9172145.1;Name=HJH9172145.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461072.1;locus_tag=O5C65_002025;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=HJH9172145.1;transl_table=11 DALFDA020000012.1 tpg gene 43448 46528 . + . ID=gene-O5C65_002026;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=O5C65_002026 DALFDA020000012.1 Protein Homology CDS 43448 46528 . + 0 ID=cds-HJH9172146.1;Parent=gene-O5C65_002026;Dbxref=NCBI_GP:HJH9172146.1;Name=HJH9172146.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461073.1;locus_tag=O5C65_002026;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=HJH9172146.1;transl_table=11 DALFDA020000012.1 tpg gene 46525 47937 . + . ID=gene-O5C65_002027;Name=O5C65_002027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002027 DALFDA020000012.1 Protein Homology CDS 46525 47937 . + 0 ID=cds-HJH9172147.1;Parent=gene-O5C65_002027;Dbxref=NCBI_GP:HJH9172147.1;Name=HJH9172147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461074.1;locus_tag=O5C65_002027;product=MFS transporter;protein_id=HJH9172147.1;transl_table=11 DALFDA020000012.1 tpg gene 47937 49340 . + . ID=gene-O5C65_002028;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=O5C65_002028 DALFDA020000012.1 Protein Homology CDS 47937 49340 . + 0 ID=cds-HJH9172148.1;Parent=gene-O5C65_002028;Dbxref=NCBI_GP:HJH9172148.1;Name=HJH9172148.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461075.1;locus_tag=O5C65_002028;product=two-component system sensor histidine kinase BaeS;protein_id=HJH9172148.1;transl_table=11 DALFDA020000012.1 tpg gene 49337 50059 . + . ID=gene-O5C65_002029;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=O5C65_002029 DALFDA020000012.1 Protein Homology CDS 49337 50059 . + 0 ID=cds-HJH9172149.1;Parent=gene-O5C65_002029;Dbxref=NCBI_GP:HJH9172149.1;Name=HJH9172149.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461076.1;locus_tag=O5C65_002029;product=two-component system response regulator BaeR;protein_id=HJH9172149.1;transl_table=11 DALFDA020000012.1 tpg gene 50328 51530 . + . ID=gene-O5C65_002030;Name=O5C65_002030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002030 DALFDA020000012.1 Protein Homology CDS 50328 51530 . + 0 ID=cds-HJH9172150.1;Parent=gene-O5C65_002030;Dbxref=NCBI_GP:HJH9172150.1;Name=HJH9172150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141078.1;locus_tag=O5C65_002030;product=cytoplasmic protein;protein_id=HJH9172150.1;transl_table=11 DALFDA020000012.1 tpg gene 51530 52246 . + . ID=gene-O5C65_002031;Name=O5C65_002031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002031 DALFDA020000012.1 Protein Homology CDS 51530 52246 . + 0 ID=cds-HJH9172151.1;Parent=gene-O5C65_002031;Dbxref=NCBI_GP:HJH9172151.1;Name=HJH9172151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461078.1;locus_tag=O5C65_002031;product=DUF1266 domain-containing protein;protein_id=HJH9172151.1;transl_table=11 DALFDA020000012.1 tpg gene 52257 54368 . + . ID=gene-O5C65_002032;Name=O5C65_002032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002032 DALFDA020000012.1 Protein Homology CDS 52257 54368 . + 0 ID=cds-HJH9172152.1;Parent=gene-O5C65_002032;Dbxref=NCBI_GP:HJH9172152.1;Name=HJH9172152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461079.1;locus_tag=O5C65_002032;product=DUF4034 domain-containing protein;protein_id=HJH9172152.1;transl_table=11 DALFDA020000012.1 tpg gene 54373 55092 . + . ID=gene-O5C65_002033;Name=O5C65_002033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002033 DALFDA020000012.1 Protein Homology CDS 54373 55092 . + 0 ID=cds-HJH9172153.1;Parent=gene-O5C65_002033;Dbxref=NCBI_GP:HJH9172153.1;Name=HJH9172153.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000586683.1;locus_tag=O5C65_002033;product=tetratricopeptide repeat protein;protein_id=HJH9172153.1;transl_table=11 DALFDA020000012.1 tpg gene 55223 55960 . - . ID=gene-O5C65_002034;Name=O5C65_002034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002034 DALFDA020000012.1 Protein Homology CDS 55223 55960 . - 0 ID=cds-HJH9172154.1;Parent=gene-O5C65_002034;Dbxref=NCBI_GP:HJH9172154.1;Name=HJH9172154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497704.1;locus_tag=O5C65_002034;product=hypothetical protein;protein_id=HJH9172154.1;transl_table=11 DALFDA020000012.1 tpg gene 55999 56931 . - . ID=gene-O5C65_002035;Name=O5C65_002035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002035 DALFDA020000012.1 Protein Homology CDS 55999 56931 . - 0 ID=cds-HJH9172155.1;Parent=gene-O5C65_002035;Dbxref=NCBI_GP:HJH9172155.1;Name=HJH9172155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000092682.1;locus_tag=O5C65_002035;product=hypothetical protein;protein_id=HJH9172155.1;transl_table=11 DALFDA020000012.1 tpg pseudogene 57127 57413 . - . ID=gene-O5C65_002036;Name=O5C65_002036;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_002036;pseudo=true DALFDA020000012.1 Protein Homology CDS 57127 57413 . - 0 ID=cds-O5C65_002036;Parent=gene-O5C65_002036;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=O5C65_002036;product=ISAs1 family transposase;pseudo=true;transl_table=11 DALFDA020000012.1 tpg gene 57804 58247 . - . ID=gene-O5C65_002037;Name=O5C65_002037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002037 DALFDA020000012.1 Protein Homology CDS 57804 58247 . - 0 ID=cds-HJH9172156.1;Parent=gene-O5C65_002037;Dbxref=NCBI_GP:HJH9172156.1;Name=HJH9172156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646715.1;locus_tag=O5C65_002037;product=hypothetical protein;protein_id=HJH9172156.1;transl_table=11 DALFDA020000012.1 tpg gene 58800 59219 . - . ID=gene-O5C65_002038;Name=O5C65_002038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002038 DALFDA020000012.1 Protein Homology CDS 58800 59219 . - 0 ID=cds-HJH9172157.1;Parent=gene-O5C65_002038;Dbxref=NCBI_GP:HJH9172157.1;Name=HJH9172157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000502176.1;locus_tag=O5C65_002038;product=hypothetical protein;protein_id=HJH9172157.1;transl_table=11 DALFDA020000012.1 tpg gene 59875 60492 . - . ID=gene-O5C65_002039;Name=O5C65_002039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002039 DALFDA020000012.1 Protein Homology CDS 59875 60492 . - 0 ID=cds-HJH9172158.1;Parent=gene-O5C65_002039;Dbxref=NCBI_GP:HJH9172158.1;Name=HJH9172158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528503.1;locus_tag=O5C65_002039;product=hypothetical protein;protein_id=HJH9172158.1;transl_table=11 DALFDA020000012.1 tpg gene 60656 62017 . + . ID=gene-O5C65_002040;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=O5C65_002040 DALFDA020000012.1 Protein Homology CDS 60656 62017 . + 0 ID=cds-HJH9172159.1;Parent=gene-O5C65_002040;Dbxref=NCBI_GP:HJH9172159.1;Name=HJH9172159.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461080.1;locus_tag=O5C65_002040;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=HJH9172159.1;transl_table=11 DALFDA020000012.1 tpg pseudogene 62469 62648 . + . ID=gene-O5C65_002041;Name=O5C65_002041;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_002041;pseudo=true DALFDA020000012.1 Protein Homology CDS 62469 62648 . + 0 ID=cds-O5C65_002041;Parent=gene-O5C65_002041;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461081.1;locus_tag=O5C65_002041;product=non-LEE encoded effector protein NleB;pseudo=true;transl_table=11 DALFDA020000012.1 tpg gene 62658 63074 . - . ID=gene-O5C65_002042;Name=O5C65_002042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002042 DALFDA020000012.1 Protein Homology CDS 62658 63074 . - 0 ID=cds-HJH9172160.1;Parent=gene-O5C65_002042;Dbxref=NCBI_GP:HJH9172160.1;Name=HJH9172160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461082.1;locus_tag=O5C65_002042;product=CesT family type III secretion system chaperone;protein_id=HJH9172160.1;transl_table=11 DALFDA020000012.1 tpg gene 63196 63531 . - . ID=gene-O5C65_002043;Name=steD;gbkey=Gene;gene=steD;gene_biotype=protein_coding;locus_tag=O5C65_002043 DALFDA020000012.1 Protein Homology CDS 63196 63531 . - 0 ID=cds-HJH9172161.1;Parent=gene-O5C65_002043;Dbxref=NCBI_GP:HJH9172161.1;Name=HJH9172161.1;gbkey=CDS;gene=steD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461083.1;locus_tag=O5C65_002043;product=type III secretion system effector SteD;protein_id=HJH9172161.1;transl_table=11 DALFDA020000012.1 tpg gene 64093 64992 . + . ID=gene-O5C65_002044;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=O5C65_002044 DALFDA020000012.1 Protein Homology CDS 64093 64992 . + 0 ID=cds-HJH9172162.1;Parent=gene-O5C65_002044;Dbxref=NCBI_GP:HJH9172162.1;Name=HJH9172162.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461084.1;locus_tag=O5C65_002044;product=lipid kinase YegS;protein_id=HJH9172162.1;transl_table=11 DALFDA020000012.1 tpg gene 65045 66097 . - . ID=gene-O5C65_002045;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=O5C65_002045 DALFDA020000012.1 Protein Homology CDS 65045 66097 . - 0 ID=cds-HJH9172163.1;Parent=gene-O5C65_002045;Dbxref=NCBI_GP:HJH9172163.1;Name=HJH9172163.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=O5C65_002045;product=class I fructose-bisphosphate aldolase;protein_id=HJH9172163.1;transl_table=11 DALFDA020000012.1 tpg gene 66350 67621 . + . ID=gene-O5C65_002046;Name=O5C65_002046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002046 DALFDA020000012.1 Protein Homology CDS 66350 67621 . + 0 ID=cds-HJH9172164.1;Parent=gene-O5C65_002046;Dbxref=NCBI_GP:HJH9172164.1;Name=HJH9172164.1;Ontology_term=GO:0015858,GO:0005337,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461086.1;locus_tag=O5C65_002046;product=nucleoside permease;protein_id=HJH9172164.1;transl_table=11 DALFDA020000012.1 tpg gene 67618 68622 . + . ID=gene-O5C65_002047;Name=O5C65_002047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002047 DALFDA020000012.1 Protein Homology CDS 67618 68622 . + 0 ID=cds-HJH9172165.1;Parent=gene-O5C65_002047;Dbxref=NCBI_GP:HJH9172165.1;Name=HJH9172165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461087.1;locus_tag=O5C65_002047;product=ADP-ribosylglycohydrolase family protein;protein_id=HJH9172165.1;transl_table=11 DALFDA020000012.1 tpg gene 68619 69584 . + . ID=gene-O5C65_002048;Name=O5C65_002048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002048 DALFDA020000012.1 Protein Homology CDS 68619 69584 . + 0 ID=cds-HJH9172166.1;Parent=gene-O5C65_002048;Dbxref=NCBI_GP:HJH9172166.1;Name=HJH9172166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461088.1;locus_tag=O5C65_002048;product=PfkB family carbohydrate kinase;protein_id=HJH9172166.1;transl_table=11 DALFDA020000012.1 tpg gene 69558 70304 . - . ID=gene-O5C65_002049;Name=O5C65_002049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002049 DALFDA020000012.1 Protein Homology CDS 69558 70304 . - 0 ID=cds-HJH9172167.1;Parent=gene-O5C65_002049;Dbxref=NCBI_GP:HJH9172167.1;Name=HJH9172167.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461089.1;locus_tag=O5C65_002049;product=GntR family transcriptional regulator;protein_id=HJH9172167.1;transl_table=11 DALFDA020000012.1 tpg gene 70340 71140 . - . ID=gene-O5C65_002050;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=O5C65_002050 DALFDA020000012.1 Protein Homology CDS 70340 71140 . - 0 ID=cds-HJH9172168.1;Parent=gene-O5C65_002050;Dbxref=NCBI_GP:HJH9172168.1;Name=HJH9172168.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461090.1;locus_tag=O5C65_002050;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=HJH9172168.1;transl_table=11 DALFDA020000012.1 tpg gene 71127 71924 . - . ID=gene-O5C65_002051;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=O5C65_002051 DALFDA020000012.1 Protein Homology CDS 71127 71924 . - 0 ID=cds-HJH9172169.1;Parent=gene-O5C65_002051;Dbxref=NCBI_GP:HJH9172169.1;Name=HJH9172169.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461091.1;locus_tag=O5C65_002051;product=hydroxyethylthiazole kinase;protein_id=HJH9172169.1;transl_table=11 DALFDA020000012.1 cmsearch riboswitch 71956 72052 . - . ID=id-DALFDA020000012.1:71956..72052;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch DALFDA020000012.1 tpg gene 72334 72648 . + . ID=gene-O5C65_002052;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=O5C65_002052 DALFDA020000012.1 Protein Homology CDS 72334 72648 . + 0 ID=cds-HJH9172170.1;Parent=gene-O5C65_002052;Dbxref=NCBI_GP:HJH9172170.1;Name=HJH9172170.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461092.1;locus_tag=O5C65_002052;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=HJH9172170.1;transl_table=11 DALFDA020000012.1 tpg gene 72690 73697 . - . ID=gene-O5C65_002053;Name=O5C65_002053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002053 DALFDA020000012.1 Protein Homology CDS 72690 73697 . - 0 ID=cds-HJH9172171.1;Parent=gene-O5C65_002053;Dbxref=NCBI_GP:HJH9172171.1;Name=HJH9172171.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001269814.1;locus_tag=O5C65_002053;product=fimbrial protein;protein_id=HJH9172171.1;transl_table=11 DALFDA020000012.1 tpg gene 73706 76186 . - . ID=gene-O5C65_002054;Name=O5C65_002054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002054 DALFDA020000012.1 Protein Homology CDS 73706 76186 . - 0 ID=cds-HJH9172172.1;Parent=gene-O5C65_002054;Dbxref=NCBI_GP:HJH9172172.1;Name=HJH9172172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310942.1;locus_tag=O5C65_002054;product=fimbrial biogenesis outer membrane usher protein;protein_id=HJH9172172.1;transl_table=11 DALFDA020000012.1 tpg gene 76199 76879 . - . ID=gene-O5C65_002055;Name=O5C65_002055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002055 DALFDA020000012.1 Protein Homology CDS 76199 76879 . - 0 ID=cds-HJH9172173.1;Parent=gene-O5C65_002055;Dbxref=NCBI_GP:HJH9172173.1;Name=HJH9172173.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734581.1;locus_tag=O5C65_002055;product=fimbria/pilus periplasmic chaperone;protein_id=HJH9172173.1;transl_table=11 DALFDA020000012.1 tpg gene 76926 77471 . - . ID=gene-O5C65_002056;Name=O5C65_002056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002056 DALFDA020000012.1 Protein Homology CDS 76926 77471 . - 0 ID=cds-HJH9172174.1;Parent=gene-O5C65_002056;Dbxref=NCBI_GP:HJH9172174.1;Name=HJH9172174.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830494.1;locus_tag=O5C65_002056;product=fimbrial protein;protein_id=HJH9172174.1;transl_table=11 DALFDA020000012.1 tpg gene 77750 78031 . - . ID=gene-O5C65_002057;Name=O5C65_002057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002057 DALFDA020000012.1 Protein Homology CDS 77750 78031 . - 0 ID=cds-HJH9172175.1;Parent=gene-O5C65_002057;Dbxref=NCBI_GP:HJH9172175.1;Name=HJH9172175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000760407.1;locus_tag=O5C65_002057;product=DUF2574 family protein;protein_id=HJH9172175.1;transl_table=11 DALFDA020000012.1 tpg gene 78298 79407 . - . ID=gene-O5C65_002058;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=O5C65_002058 DALFDA020000012.1 Protein Homology CDS 78298 79407 . - 0 ID=cds-HJH9172176.1;Parent=gene-O5C65_002058;Dbxref=NCBI_GP:HJH9172176.1;Name=HJH9172176.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461098.1;locus_tag=O5C65_002058;product=iron-sulfur cluster carrier protein ApbC;protein_id=HJH9172176.1;transl_table=11 DALFDA020000012.1 tpg gene 79572 81605 . + . ID=gene-O5C65_002059;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=O5C65_002059 DALFDA020000012.1 Protein Homology CDS 79572 81605 . + 0 ID=cds-HJH9172177.1;Parent=gene-O5C65_002059;Dbxref=NCBI_GP:HJH9172177.1;Name=HJH9172177.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461099.1;locus_tag=O5C65_002059;product=methionine--tRNA ligase;protein_id=HJH9172177.1;transl_table=11 DALFDA020000012.1 tpg gene 81846 82304 . + . ID=gene-O5C65_002060;Name=O5C65_002060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002060 DALFDA020000012.1 Protein Homology CDS 81846 82304 . + 0 ID=cds-HJH9172178.1;Parent=gene-O5C65_002060;Dbxref=NCBI_GP:HJH9172178.1;Name=HJH9172178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461100.1;locus_tag=O5C65_002060;product=YehR family lipoprotein;protein_id=HJH9172178.1;transl_table=11 DALFDA020000012.1 tpg gene 82476 83006 . + . ID=gene-O5C65_002061;Name=O5C65_002061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002061 DALFDA020000012.1 Protein Homology CDS 82476 83006 . + 0 ID=cds-HJH9172179.1;Parent=gene-O5C65_002061;Dbxref=NCBI_GP:HJH9172179.1;Name=HJH9172179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461101.1;locus_tag=O5C65_002061;product=YehR family lipoprotein;protein_id=HJH9172179.1;transl_table=11 DALFDA020000012.1 tpg gene 83063 83530 . - . ID=gene-O5C65_002062;Name=O5C65_002062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002062 DALFDA020000012.1 Protein Homology CDS 83063 83530 . - 0 ID=cds-HJH9172180.1;Parent=gene-O5C65_002062;Dbxref=NCBI_GP:HJH9172180.1;Name=HJH9172180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461102.1;locus_tag=O5C65_002062;product=DUF1456 family protein;protein_id=HJH9172180.1;transl_table=11 DALFDA020000012.1 tpg gene 83577 84296 . - . ID=gene-O5C65_002063;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=O5C65_002063 DALFDA020000012.1 Protein Homology CDS 83577 84296 . - 0 ID=cds-HJH9172181.1;Parent=gene-O5C65_002063;Dbxref=NCBI_GP:HJH9172181.1;Name=HJH9172181.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461103.1;locus_tag=O5C65_002063;product=two-component system response regulator BtsR;protein_id=HJH9172181.1;transl_table=11 DALFDA020000012.1 tpg gene 84293 85978 . - . ID=gene-O5C65_002064;Name=O5C65_002064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002064 DALFDA020000012.1 Protein Homology CDS 84293 85978 . - 0 ID=cds-HJH9172182.1;Parent=gene-O5C65_002064;Dbxref=NCBI_GP:HJH9172182.1;Name=HJH9172182.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461104.1;locus_tag=O5C65_002064;product=LytS/YhcK type 5TM receptor domain-containing protein;protein_id=HJH9172182.1;transl_table=11 DALFDA020000012.1 tpg gene 86201 86932 . + . ID=gene-O5C65_002065;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=O5C65_002065 DALFDA020000012.1 Protein Homology CDS 86201 86932 . + 0 ID=cds-HJH9172183.1;Parent=gene-O5C65_002065;Dbxref=NCBI_GP:HJH9172183.1;Name=HJH9172183.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461105.1;locus_tag=O5C65_002065;product=HTH-type transcriptional regulator MlrA;protein_id=HJH9172183.1;transl_table=11 DALFDA020000012.1 tpg gene 86992 87099 . + . ID=gene-O5C65_002066;Name=O5C65_002066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002066 DALFDA020000012.1 Protein Homology CDS 86992 87099 . + 0 ID=cds-HJH9172184.1;Parent=gene-O5C65_002066;Dbxref=NCBI_GP:HJH9172184.1;Name=HJH9172184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461106.1;locus_tag=O5C65_002066;product=protein YohO;protein_id=HJH9172184.1;transl_table=11 DALFDA020000012.1 tpg gene 87080 87811 . - . ID=gene-O5C65_002067;Name=O5C65_002067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002067 DALFDA020000012.1 Protein Homology CDS 87080 87811 . - 0 ID=cds-HJH9172185.1;Parent=gene-O5C65_002067;Dbxref=NCBI_GP:HJH9172185.1;Name=HJH9172185.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461107.1;locus_tag=O5C65_002067;product=ABC transporter permease;protein_id=HJH9172185.1;transl_table=11 DALFDA020000012.1 tpg gene 87795 88742 . - . ID=gene-O5C65_002068;Name=O5C65_002068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002068 DALFDA020000012.1 Protein Homology CDS 87795 88742 . - 0 ID=cds-HJH9172186.1;Parent=gene-O5C65_002068;Dbxref=NCBI_GP:HJH9172186.1;Name=HJH9172186.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461108.1;locus_tag=O5C65_002068;product=ABC transporter ATP-binding protein;protein_id=HJH9172186.1;transl_table=11 DALFDA020000012.1 tpg gene 88735 89904 . - . ID=gene-O5C65_002069;Name=O5C65_002069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002069 DALFDA020000012.1 Protein Homology CDS 88735 89904 . - 0 ID=cds-HJH9172187.1;Parent=gene-O5C65_002069;Dbxref=NCBI_GP:HJH9172187.1;Name=HJH9172187.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461109.1;locus_tag=O5C65_002069;product=ABC transporter permease;protein_id=HJH9172187.1;transl_table=11 DALFDA020000012.1 tpg gene 89908 90825 . - . ID=gene-O5C65_002070;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=O5C65_002070 DALFDA020000012.1 Protein Homology CDS 89908 90825 . - 0 ID=cds-HJH9172188.1;Parent=gene-O5C65_002070;Dbxref=NCBI_GP:HJH9172188.1;Name=HJH9172188.1;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461110.1;locus_tag=O5C65_002070;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=HJH9172188.1;transl_table=11 DALFDA020000012.1 tpg gene 91006 93303 . - . ID=gene-O5C65_002071;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=O5C65_002071 DALFDA020000012.1 Protein Homology CDS 91006 93303 . - 0 ID=cds-HJH9172189.1;Parent=gene-O5C65_002071;Dbxref=NCBI_GP:HJH9172189.1;Name=HJH9172189.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461111.1;locus_tag=O5C65_002071;product=beta-glucosidase BglX;protein_id=HJH9172189.1;transl_table=11 DALFDA020000012.1 tpg gene 93570 95300 . + . ID=gene-O5C65_002072;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=O5C65_002072 DALFDA020000012.1 Protein Homology CDS 93570 95300 . + 0 ID=cds-HJH9172190.1;Parent=gene-O5C65_002072;Dbxref=NCBI_GP:HJH9172190.1;Name=HJH9172190.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461112.1;locus_tag=O5C65_002072;product=D-lactate dehydrogenase;protein_id=HJH9172190.1;transl_table=11 DALFDA020000012.1 tpg gene 95359 96306 . - . ID=gene-O5C65_002073;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=O5C65_002073 DALFDA020000012.1 Protein Homology CDS 95359 96306 . - 0 ID=cds-HJH9172191.1;Parent=gene-O5C65_002073;Dbxref=NCBI_GP:HJH9172191.1;Name=HJH9172191.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461113.1;locus_tag=O5C65_002073;product=D-alanyl-D-alanine endopeptidase;protein_id=HJH9172191.1;transl_table=11 DALFDA020000012.1 tpg gene 96472 97059 . - . ID=gene-O5C65_002074;Name=O5C65_002074;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002074 DALFDA020000012.1 Protein Homology CDS 96472 97059 . - 0 ID=cds-HJH9172192.1;Parent=gene-O5C65_002074;Dbxref=NCBI_GP:HJH9172192.1;Name=HJH9172192.1;Ontology_term=GO:0016192,GO:0031267;gbkey=CDS;go_function=small GTPase binding|0031267||IEA;go_process=vesicle-mediated transport|0016192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=O5C65_002074;product=Yip1 family protein;protein_id=HJH9172192.1;transl_table=11 DALFDA020000012.1 tpg gene 97218 97787 . + . ID=gene-O5C65_002075;Name=O5C65_002075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002075 DALFDA020000012.1 Protein Homology CDS 97218 97787 . + 0 ID=cds-HJH9172193.1;Parent=gene-O5C65_002075;Dbxref=NCBI_GP:HJH9172193.1;Name=HJH9172193.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669449.1;locus_tag=O5C65_002075;product=DedA family protein;protein_id=HJH9172193.1;transl_table=11 DALFDA020000012.1 tpg gene 97836 98597 . - . ID=gene-O5C65_002076;Name=O5C65_002076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002076 DALFDA020000012.1 Protein Homology CDS 97836 98597 . - 0 ID=cds-HJH9172194.1;Parent=gene-O5C65_002076;Dbxref=NCBI_GP:HJH9172194.1;Name=HJH9172194.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461116.1;locus_tag=O5C65_002076;product=SDR family oxidoreductase;protein_id=HJH9172194.1;transl_table=11 DALFDA020000012.1 tpg gene 98663 100099 . - . ID=gene-O5C65_002077;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=O5C65_002077 DALFDA020000012.1 Protein Homology CDS 98663 100099 . - 0 ID=cds-HJH9172195.1;Parent=gene-O5C65_002077;Dbxref=NCBI_GP:HJH9172195.1;Name=HJH9172195.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461117.1;locus_tag=O5C65_002077;product=multidrug resistance outer membrane protein MdtQ;protein_id=HJH9172195.1;transl_table=11 DALFDA020000012.1 tpg gene 100417 100500 . + . ID=gene-O5C65_002078;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=O5C65_002078 DALFDA020000012.1 Protein Homology CDS 100417 100500 . + 0 ID=cds-HJH9172196.1;Parent=gene-O5C65_002078;Dbxref=NCBI_GP:HJH9172196.1;Name=HJH9172196.1;gbkey=CDS;gene=yohP;inference=COORDINATES: protein motif:HMM:NF011345.0;locus_tag=O5C65_002078;product=small membrane protein YohP;protein_id=HJH9172196.1;transl_table=11 DALFDA020000012.1 tpg gene 100558 101496 . - . ID=gene-O5C65_002079;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=O5C65_002079 DALFDA020000012.1 Protein Homology CDS 100558 101496 . - 0 ID=cds-HJH9172197.1;Parent=gene-O5C65_002079;Dbxref=NCBI_GP:HJH9172197.1;Name=HJH9172197.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461119.1;locus_tag=O5C65_002079;product=tRNA dihydrouridine(16) synthase DusC;protein_id=HJH9172197.1;transl_table=11 DALFDA020000012.1 tpg gene 101605 102798 . - . ID=gene-O5C65_002080;Name=O5C65_002080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002080 DALFDA020000012.1 Protein Homology CDS 101605 102798 . - 0 ID=cds-HJH9172198.1;Parent=gene-O5C65_002080;Dbxref=NCBI_GP:HJH9172198.1;Name=HJH9172198.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461120.1;locus_tag=O5C65_002080;product=3-hydroxybenzoate 6-monooxygenase;protein_id=HJH9172198.1;transl_table=11 DALFDA020000012.1 tpg gene 102813 103457 . - . ID=gene-O5C65_002081;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=O5C65_002081 DALFDA020000012.1 Protein Homology CDS 102813 103457 . - 0 ID=cds-HJH9172199.1;Parent=gene-O5C65_002081;Dbxref=NCBI_GP:HJH9172199.1;Name=HJH9172199.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034,GO:0005737;gbkey=CDS;gene=maiA;go_component=cytoplasm|0005737||IEA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461121.1;locus_tag=O5C65_002081;product=maleylacetoacetate isomerase;protein_id=HJH9172199.1;transl_table=11 DALFDA020000012.1 tpg gene 103466 104167 . - . ID=gene-O5C65_002082;Name=O5C65_002082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002082 DALFDA020000012.1 Protein Homology CDS 103466 104167 . - 0 ID=cds-HJH9172200.1;Parent=gene-O5C65_002082;Dbxref=NCBI_GP:HJH9172200.1;Name=HJH9172200.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461122.1;locus_tag=O5C65_002082;product=fumarylacetoacetate hydrolase family protein;protein_id=HJH9172200.1;transl_table=11 DALFDA020000012.1 tpg gene 104183 105220 . - . ID=gene-O5C65_002083;Name=gtdA;gbkey=Gene;gene=gtdA;gene_biotype=protein_coding;locus_tag=O5C65_002083 DALFDA020000012.1 Protein Homology CDS 104183 105220 . - 0 ID=cds-HJH9172201.1;Parent=gene-O5C65_002083;Dbxref=NCBI_GP:HJH9172201.1;Name=HJH9172201.1;Ontology_term=GO:0047922;gbkey=CDS;gene=gtdA;go_function=gentisate 1%2C2-dioxygenase activity|0047922||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461123.1;locus_tag=O5C65_002083;product=gentisate 1%2C2-dioxygenase;protein_id=HJH9172201.1;transl_table=11 DALFDA020000012.1 tpg gene 105232 106590 . - . ID=gene-O5C65_002084;Name=mhbT;gbkey=Gene;gene=mhbT;gene_biotype=protein_coding;locus_tag=O5C65_002084 DALFDA020000012.1 Protein Homology CDS 105232 106590 . - 0 ID=cds-HJH9172202.1;Parent=gene-O5C65_002084;Dbxref=NCBI_GP:HJH9172202.1;Name=HJH9172202.1;gbkey=CDS;gene=mhbT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461124.1;locus_tag=O5C65_002084;product=3-hydroxybenzoate transporter MhbT;protein_id=HJH9172202.1;transl_table=11 DALFDA020000012.1 tpg gene 106716 107624 . + . ID=gene-O5C65_002085;Name=O5C65_002085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002085 DALFDA020000012.1 Protein Homology CDS 106716 107624 . + 0 ID=cds-HJH9172203.1;Parent=gene-O5C65_002085;Dbxref=NCBI_GP:HJH9172203.1;Name=HJH9172203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461125.1;locus_tag=O5C65_002085;product=LysR substrate-binding domain-containing protein;protein_id=HJH9172203.1;transl_table=11 DALFDA020000012.1 tpg gene 107756 108154 . + . ID=gene-O5C65_002086;Name=O5C65_002086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002086 DALFDA020000012.1 Protein Homology CDS 107756 108154 . + 0 ID=cds-HJH9172204.1;Parent=gene-O5C65_002086;Dbxref=NCBI_GP:HJH9172204.1;Name=HJH9172204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461126.1;locus_tag=O5C65_002086;product=CidA/LrgA family protein;protein_id=HJH9172204.1;transl_table=11 DALFDA020000012.1 tpg gene 108151 108846 . + . ID=gene-O5C65_002087;Name=O5C65_002087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002087 DALFDA020000012.1 Protein Homology CDS 108151 108846 . + 0 ID=cds-HJH9172205.1;Parent=gene-O5C65_002087;Dbxref=NCBI_GP:HJH9172205.1;Name=HJH9172205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461127.1;locus_tag=O5C65_002087;product=CidB/LrgB family autolysis modulator;protein_id=HJH9172205.1;transl_table=11 DALFDA020000012.1 tpg gene 109000 109884 . + . ID=gene-O5C65_002088;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=O5C65_002088 DALFDA020000012.1 Protein Homology CDS 109000 109884 . + 0 ID=cds-HJH9172206.1;Parent=gene-O5C65_002088;Dbxref=NCBI_GP:HJH9172206.1;Name=HJH9172206.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461128.1;locus_tag=O5C65_002088;product=cytidine deaminase;protein_id=HJH9172206.1;transl_table=11 DALFDA020000012.1 tpg gene 110061 110780 . + . ID=gene-O5C65_002089;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=O5C65_002089 DALFDA020000012.1 Protein Homology CDS 110061 110780 . + 0 ID=cds-HJH9172207.1;Parent=gene-O5C65_002089;Dbxref=NCBI_GP:HJH9172207.1;Name=HJH9172207.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461129.1;locus_tag=O5C65_002089;product=outer membrane permeability protein SanA;protein_id=HJH9172207.1;transl_table=11 DALFDA020000012.1 tpg gene 110777 111022 . + . ID=gene-O5C65_002090;Name=O5C65_002090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002090 DALFDA020000012.1 Protein Homology CDS 110777 111022 . + 0 ID=cds-HJH9172208.1;Parent=gene-O5C65_002090;Dbxref=NCBI_GP:HJH9172208.1;Name=HJH9172208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461130.1;locus_tag=O5C65_002090;product=DUF2542 family protein;protein_id=HJH9172208.1;transl_table=11 DALFDA020000012.1 tpg gene 111227 112468 . + . ID=gene-O5C65_002091;Name=O5C65_002091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002091 DALFDA020000012.1 Protein Homology CDS 111227 112468 . + 0 ID=cds-HJH9172209.1;Parent=gene-O5C65_002091;Dbxref=NCBI_GP:HJH9172209.1;Name=HJH9172209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461131.1;locus_tag=O5C65_002091;product=NAD(P)-dependent oxidoreductase;protein_id=HJH9172209.1;transl_table=11 DALFDA020000012.1 tpg gene 112462 113697 . + . ID=gene-O5C65_002092;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=O5C65_002092 DALFDA020000012.1 Protein Homology CDS 112462 113697 . + 0 ID=cds-HJH9172210.1;Parent=gene-O5C65_002092;Dbxref=NCBI_GP:HJH9172210.1;Name=HJH9172210.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=O5C65_002092;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=HJH9172210.1;transl_table=11 DALFDA020000012.1 tpg gene 113772 114782 . - . ID=gene-O5C65_002093;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=O5C65_002093 DALFDA020000012.1 Protein Homology CDS 113772 114782 . - 0 ID=cds-HJH9172211.1;Parent=gene-O5C65_002093;Dbxref=NCBI_GP:HJH9172211.1;Name=HJH9172211.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=O5C65_002093;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=HJH9172211.1;transl_table=11 DALFDA020000012.1 tpg gene 114798 116318 . - . ID=gene-O5C65_002094;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=O5C65_002094 DALFDA020000012.1 Protein Homology CDS 114798 116318 . - 0 ID=cds-HJH9172212.1;Parent=gene-O5C65_002094;Dbxref=NCBI_GP:HJH9172212.1;Name=HJH9172212.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=O5C65_002094;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=HJH9172212.1;transl_table=11 DALFDA020000012.1 tpg gene 116452 117450 . - . ID=gene-O5C65_002095;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=O5C65_002095 DALFDA020000012.1 Protein Homology CDS 116452 117450 . - 0 ID=cds-HJH9172213.1;Parent=gene-O5C65_002095;Dbxref=NCBI_GP:HJH9172213.1;Name=HJH9172213.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461135.1;locus_tag=O5C65_002095;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=HJH9172213.1;transl_table=11 DALFDA020000012.1 tpg gene 117949 118971 . - . ID=gene-O5C65_002096;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=O5C65_002096 DALFDA020000012.1 Protein Homology CDS 117949 118971 . - 0 ID=cds-HJH9172214.1;Parent=gene-O5C65_002096;Dbxref=NCBI_GP:HJH9172214.1;Name=HJH9172214.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461136.1;locus_tag=O5C65_002096;product=HTH-type transcriptional regulator GalS;protein_id=HJH9172214.1;transl_table=11 DALFDA020000012.1 tpg gene 119121 120263 . - . ID=gene-O5C65_002097;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=O5C65_002097 DALFDA020000012.1 Protein Homology CDS 119121 120263 . - 0 ID=cds-HJH9172215.1;Parent=gene-O5C65_002097;Dbxref=NCBI_GP:HJH9172215.1;Name=HJH9172215.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461137.1;locus_tag=O5C65_002097;product=DUF418 domain-containing protein YeiB;protein_id=HJH9172215.1;transl_table=11 DALFDA020000012.1 tpg gene 120278 120946 . - . ID=gene-O5C65_002098;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=O5C65_002098 DALFDA020000012.1 Protein Homology CDS 120278 120946 . - 0 ID=cds-HJH9172216.1;Parent=gene-O5C65_002098;Dbxref=NCBI_GP:HJH9172216.1;Name=HJH9172216.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461138.1;locus_tag=O5C65_002098;product=GTP cyclohydrolase I FolE;protein_id=HJH9172216.1;transl_table=11 DALFDA020000012.1 tpg gene 121276 122133 . + . ID=gene-O5C65_002099;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=O5C65_002099 DALFDA020000012.1 Protein Homology CDS 121276 122133 . + 0 ID=cds-HJH9172217.1;Parent=gene-O5C65_002099;Dbxref=NCBI_GP:HJH9172217.1;Name=HJH9172217.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461139.2;locus_tag=O5C65_002099;product=S-formylglutathione hydrolase;protein_id=HJH9172217.1;transl_table=11 DALFDA020000012.1 tpg gene 122122 122511 . - . ID=gene-O5C65_002100;Name=O5C65_002100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002100 DALFDA020000012.1 Protein Homology CDS 122122 122511 . - 0 ID=cds-HJH9172218.1;Parent=gene-O5C65_002100;Dbxref=NCBI_GP:HJH9172218.1;Name=HJH9172218.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461140.1;locus_tag=O5C65_002100;product=helix-turn-helix domain-containing protein;protein_id=HJH9172218.1;transl_table=11 DALFDA020000012.1 tpg gene 122516 123883 . - . ID=gene-O5C65_002101;Name=O5C65_002101;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002101 DALFDA020000012.1 Protein Homology CDS 122516 123883 . - 0 ID=cds-HJH9172219.1;Parent=gene-O5C65_002101;Dbxref=NCBI_GP:HJH9172219.1;Name=HJH9172219.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461141.1;locus_tag=O5C65_002101;product=L-serine ammonia-lyase;protein_id=HJH9172219.1;transl_table=11 DALFDA020000012.1 tpg gene 124100 124987 . + . ID=gene-O5C65_002102;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=O5C65_002102 DALFDA020000012.1 Protein Homology CDS 124100 124987 . + 0 ID=cds-HJH9172220.1;Parent=gene-O5C65_002102;Dbxref=NCBI_GP:HJH9172220.1;Name=HJH9172220.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461142.1;locus_tag=O5C65_002102;product=phosphoserine phosphatase SerB;protein_id=HJH9172220.1;transl_table=11 DALFDA020000012.1 tpg gene 125020 126342 . + . ID=gene-O5C65_002103;Name=O5C65_002103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002103 DALFDA020000012.1 Protein Homology CDS 125020 126342 . + 0 ID=cds-HJH9172221.1;Parent=gene-O5C65_002103;Dbxref=NCBI_GP:HJH9172221.1;Name=HJH9172221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461143.1;locus_tag=O5C65_002103;product=MFS transporter;protein_id=HJH9172221.1;transl_table=11 DALFDA020000012.1 tpg gene 126386 128377 . - . ID=gene-O5C65_002104;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=O5C65_002104 DALFDA020000012.1 Protein Homology CDS 126386 128377 . - 0 ID=cds-HJH9172222.1;Parent=gene-O5C65_002104;Dbxref=NCBI_GP:HJH9172222.1;Name=HJH9172222.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461144.1;locus_tag=O5C65_002104;product=catecholate siderophore receptor CirA;protein_id=HJH9172222.1;transl_table=11 DALFDA020000012.1 tpg gene 128724 130193 . - . ID=gene-O5C65_002105;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=O5C65_002105 DALFDA020000012.1 Protein Homology CDS 128724 130193 . - 0 ID=cds-HJH9172223.1;Parent=gene-O5C65_002105;Dbxref=NCBI_GP:HJH9172223.1;Name=HJH9172223.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461145.1;locus_tag=O5C65_002105;product=lysine-specific permease;protein_id=HJH9172223.1;transl_table=11 DALFDA020000012.1 tpg gene 130383 131246 . - . ID=gene-O5C65_002106;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=O5C65_002106 DALFDA020000012.1 Protein Homology CDS 130383 131246 . - 0 ID=cds-HJH9172224.1;Parent=gene-O5C65_002106;Dbxref=NCBI_GP:HJH9172224.1;Name=HJH9172224.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461146.1;locus_tag=O5C65_002106;product=DNA-binding transcriptional regulator YeiE;protein_id=HJH9172224.1;transl_table=11 DALFDA020000012.1 tpg gene 131367 132416 . + . ID=gene-O5C65_002107;Name=O5C65_002107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002107 DALFDA020000012.1 Protein Homology CDS 131367 132416 . + 0 ID=cds-HJH9172225.1;Parent=gene-O5C65_002107;Dbxref=NCBI_GP:HJH9172225.1;Name=HJH9172225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461147.1;locus_tag=O5C65_002107;product=YeiH family protein;protein_id=HJH9172225.1;transl_table=11 DALFDA020000012.1 tpg gene 132495 133352 . + . ID=gene-O5C65_002108;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=O5C65_002108 DALFDA020000012.1 Protein Homology CDS 132495 133352 . + 0 ID=cds-HJH9172226.1;Parent=gene-O5C65_002108;Dbxref=NCBI_GP:HJH9172226.1;Name=HJH9172226.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461148.1;locus_tag=O5C65_002108;product=deoxyribonuclease IV;protein_id=HJH9172226.1;transl_table=11 DALFDA020000012.1 tpg gene 133417 135105 . - . ID=gene-O5C65_002109;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=O5C65_002109 DALFDA020000012.1 Protein Homology CDS 133417 135105 . - 0 ID=cds-HJH9172227.1;Parent=gene-O5C65_002109;Dbxref=NCBI_GP:HJH9172227.1;Name=HJH9172227.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461149.1;locus_tag=O5C65_002109;product=PTS fructose transporter subunit IIBC;protein_id=HJH9172227.1;transl_table=11 DALFDA020000012.1 tpg gene 135122 136060 . - . ID=gene-O5C65_002110;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=O5C65_002110 DALFDA020000012.1 Protein Homology CDS 135122 136060 . - 0 ID=cds-HJH9172228.1;Parent=gene-O5C65_002110;Dbxref=NCBI_GP:HJH9172228.1;Name=HJH9172228.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461150.1;locus_tag=O5C65_002110;product=1-phosphofructokinase;protein_id=HJH9172228.1;transl_table=11 DALFDA020000012.1 tpg gene 136060 137190 . - . ID=gene-O5C65_002111;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=O5C65_002111 DALFDA020000012.1 Protein Homology CDS 136060 137190 . - 0 ID=cds-HJH9172229.1;Parent=gene-O5C65_002111;Dbxref=NCBI_GP:HJH9172229.1;Name=HJH9172229.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461151.1;locus_tag=O5C65_002111;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=HJH9172229.1;transl_table=11 DALFDA020000012.1 tpg gene 137559 138740 . + . ID=gene-O5C65_002112;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=O5C65_002112 DALFDA020000012.1 Protein Homology CDS 137559 138740 . + 0 ID=cds-HJH9172230.1;Parent=gene-O5C65_002112;Dbxref=NCBI_GP:HJH9172230.1;Name=HJH9172230.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461152.1;locus_tag=O5C65_002112;product=sugar efflux transporter SetB;protein_id=HJH9172230.1;transl_table=11 DALFDA020000012.1 tpg gene 138805 139470 . - . ID=gene-O5C65_002113;Name=O5C65_002113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002113 DALFDA020000012.1 Protein Homology CDS 138805 139470 . - 0 ID=cds-HJH9172231.1;Parent=gene-O5C65_002113;Dbxref=NCBI_GP:HJH9172231.1;Name=HJH9172231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461153.1;locus_tag=O5C65_002113;product=GNVR domain-containing protein;protein_id=HJH9172231.1;transl_table=11 DALFDA020000012.1 tpg gene 139472 139594 . - . ID=gene-O5C65_002114;Name=O5C65_002114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002114 DALFDA020000012.1 Protein Homology CDS 139472 139594 . - 0 ID=cds-HJH9172232.1;Parent=gene-O5C65_002114;Dbxref=NCBI_GP:HJH9172232.1;Name=HJH9172232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461154.1;locus_tag=O5C65_002114;product=hypothetical protein;protein_id=HJH9172232.1;transl_table=11 DALFDA020000012.1 tpg gene 139982 140236 . - . ID=gene-O5C65_002115;Name=O5C65_002115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002115 DALFDA020000012.1 Protein Homology CDS 139982 140236 . - 0 ID=cds-HJH9172233.1;Parent=gene-O5C65_002115;Dbxref=NCBI_GP:HJH9172233.1;Name=HJH9172233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675765.1;locus_tag=O5C65_002115;product=YkgJ family cysteine cluster protein;protein_id=HJH9172233.1;transl_table=11 DALFDA020000012.1 tpg gene 140560 141132 . + . ID=gene-O5C65_002116;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=O5C65_002116 DALFDA020000012.1 Protein Homology CDS 140560 141132 . + 0 ID=cds-HJH9172234.1;Parent=gene-O5C65_002116;Dbxref=NCBI_GP:HJH9172234.1;Name=HJH9172234.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=O5C65_002116;product=elongation factor P-like protein YeiP;protein_id=HJH9172234.1;transl_table=11 DALFDA020000012.1 tpg gene 141343 142329 . + . ID=gene-O5C65_002117;Name=O5C65_002117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002117 DALFDA020000012.1 Protein Homology CDS 141343 142329 . + 0 ID=cds-HJH9172235.1;Parent=gene-O5C65_002117;Dbxref=NCBI_GP:HJH9172235.1;Name=HJH9172235.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461156.1;locus_tag=O5C65_002117;product=CobW family GTP-binding protein;protein_id=HJH9172235.1;transl_table=11 DALFDA020000012.1 tpg gene 142359 143078 . + . ID=gene-O5C65_002118;Name=O5C65_002118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002118 DALFDA020000012.1 Protein Homology CDS 142359 143078 . + 0 ID=cds-HJH9172236.1;Parent=gene-O5C65_002118;Dbxref=NCBI_GP:HJH9172236.1;Name=HJH9172236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461157.1;locus_tag=O5C65_002118;product=phosphatase PAP2 family protein;protein_id=HJH9172236.1;transl_table=11 DALFDA020000012.1 tpg gene 143492 144064 . + . ID=gene-O5C65_002119;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=O5C65_002119 DALFDA020000012.1 Protein Homology CDS 143492 144064 . + 0 ID=cds-HJH9172237.1;Parent=gene-O5C65_002119;Dbxref=NCBI_GP:HJH9172237.1;Name=HJH9172237.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461158.1;locus_tag=O5C65_002119;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=HJH9172237.1;transl_table=11 DALFDA020000012.1 tpg gene 144390 145946 . + . ID=gene-O5C65_002120;Name=O5C65_002120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002120 DALFDA020000012.1 Protein Homology CDS 144390 145946 . + 0 ID=cds-HJH9172238.1;Parent=gene-O5C65_002120;Dbxref=NCBI_GP:HJH9172238.1;Name=HJH9172238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461159.1;locus_tag=O5C65_002120;product=cyclic di-GMP phosphodiesterase;protein_id=HJH9172238.1;transl_table=11 DALFDA020000012.1 tpg gene 146053 147858 . + . ID=gene-O5C65_002121;Name=O5C65_002121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002121 DALFDA020000012.1 Protein Homology CDS 146053 147858 . + 0 ID=cds-HJH9172239.1;Parent=gene-O5C65_002121;Dbxref=NCBI_GP:HJH9172239.1;Name=HJH9172239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461160.1;locus_tag=O5C65_002121;product=extracellular solute-binding protein;protein_id=HJH9172239.1;transl_table=11 DALFDA020000012.1 tpg gene 147868 148962 . + . ID=gene-O5C65_002122;Name=O5C65_002122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002122 DALFDA020000012.1 Protein Homology CDS 147868 148962 . + 0 ID=cds-HJH9172240.1;Parent=gene-O5C65_002122;Dbxref=NCBI_GP:HJH9172240.1;Name=HJH9172240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461161.1;locus_tag=O5C65_002122;product=microcin C ABC transporter permease YejB;protein_id=HJH9172240.1;transl_table=11 DALFDA020000012.1 tpg gene 148962 149987 . + . ID=gene-O5C65_002123;Name=O5C65_002123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002123 DALFDA020000012.1 Protein Homology CDS 148962 149987 . + 0 ID=cds-HJH9172241.1;Parent=gene-O5C65_002123;Dbxref=NCBI_GP:HJH9172241.1;Name=HJH9172241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461162.1;locus_tag=O5C65_002123;product=ABC transporter permease;protein_id=HJH9172241.1;transl_table=11 DALFDA020000012.1 tpg gene 149989 151578 . + . ID=gene-O5C65_002124;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=O5C65_002124 DALFDA020000012.1 Protein Homology CDS 149989 151578 . + 0 ID=cds-HJH9172242.1;Parent=gene-O5C65_002124;Dbxref=NCBI_GP:HJH9172242.1;Name=HJH9172242.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461163.1;locus_tag=O5C65_002124;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=HJH9172242.1;transl_table=11 DALFDA020000012.1 tpg gene 151582 151926 . - . ID=gene-O5C65_002125;Name=O5C65_002125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002125 DALFDA020000012.1 Protein Homology CDS 151582 151926 . - 0 ID=cds-HJH9172243.1;Parent=gene-O5C65_002125;Dbxref=NCBI_GP:HJH9172243.1;Name=HJH9172243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461164.1;locus_tag=O5C65_002125;product=YejG family protein;protein_id=HJH9172243.1;transl_table=11 DALFDA020000012.1 tpg gene 152317 153507 . - . ID=gene-O5C65_002126;Name=O5C65_002126;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002126 DALFDA020000012.1 Protein Homology CDS 152317 153507 . - 0 ID=cds-HJH9172244.1;Parent=gene-O5C65_002126;Dbxref=NCBI_GP:HJH9172244.1;Name=HJH9172244.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461165.1;locus_tag=O5C65_002126;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=HJH9172244.1;transl_table=11 DALFDA020000012.1 tpg gene 153535 154230 . - . ID=gene-O5C65_002127;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=O5C65_002127 DALFDA020000012.1 Protein Homology CDS 153535 154230 . - 0 ID=cds-HJH9172245.1;Parent=gene-O5C65_002127;Dbxref=NCBI_GP:HJH9172245.1;Name=HJH9172245.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461166.1;locus_tag=O5C65_002127;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=HJH9172245.1;transl_table=11 DALFDA020000012.1 tpg gene 154382 156142 . + . ID=gene-O5C65_002128;Name=O5C65_002128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002128 DALFDA020000012.1 Protein Homology CDS 154382 156142 . + 0 ID=cds-HJH9172246.1;Parent=gene-O5C65_002128;Dbxref=NCBI_GP:HJH9172246.1;Name=HJH9172246.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461167.1;locus_tag=O5C65_002128;product=DEAD/DEAH box helicase;protein_id=HJH9172246.1;transl_table=11 DALFDA020000012.1 tpg gene 156267 156551 . + . ID=gene-O5C65_002129;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=O5C65_002129 DALFDA020000012.1 Protein Homology CDS 156267 156551 . + 0 ID=cds-HJH9172247.1;Parent=gene-O5C65_002129;Dbxref=NCBI_GP:HJH9172247.1;Name=HJH9172247.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=O5C65_002129;product=50S ribosomal protein L25;protein_id=HJH9172247.1;transl_table=11 DALFDA020000012.1 tpg gene 156660 157280 . - . ID=gene-O5C65_002130;Name=O5C65_002130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002130 DALFDA020000012.1 Protein Homology CDS 156660 157280 . - 0 ID=cds-HJH9172248.1;Parent=gene-O5C65_002130;Dbxref=NCBI_GP:HJH9172248.1;Name=HJH9172248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461169.1;locus_tag=O5C65_002130;product=hypothetical protein;protein_id=HJH9172248.1;transl_table=11 DALFDA020000012.1 tpg gene 157308 158315 . - . ID=gene-O5C65_002131;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=O5C65_002131 DALFDA020000012.1 Protein Homology CDS 157308 158315 . - 0 ID=cds-HJH9172249.1;Parent=gene-O5C65_002131;Dbxref=NCBI_GP:HJH9172249.1;Name=HJH9172249.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461170.1;locus_tag=O5C65_002131;product=nucleoid-associated protein YejK;protein_id=HJH9172249.1;transl_table=11 DALFDA020000012.1 tpg gene 158495 158722 . + . ID=gene-O5C65_002132;Name=O5C65_002132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002132 DALFDA020000012.1 Protein Homology CDS 158495 158722 . + 0 ID=cds-HJH9172250.1;Parent=gene-O5C65_002132;Dbxref=NCBI_GP:HJH9172250.1;Name=HJH9172250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461171.1;locus_tag=O5C65_002132;product=YejL family protein;protein_id=HJH9172250.1;transl_table=11 DALFDA020000012.1 tpg gene 158754 160514 . + . ID=gene-O5C65_002133;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=O5C65_002133 DALFDA020000012.1 Protein Homology CDS 158754 160514 . + 0 ID=cds-HJH9172251.1;Parent=gene-O5C65_002133;Dbxref=NCBI_GP:HJH9172251.1;Name=HJH9172251.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=O5C65_002133;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=HJH9172251.1;transl_table=11 DALFDA020000012.1 tpg gene 160588 160664 . + . ID=gene-O5C65_002134;Name=O5C65_002134;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_002134 DALFDA020000012.1 tRNAscan-SE tRNA 160588 160664 . + . ID=rna-O5C65_002134;Parent=gene-O5C65_002134;anticodon=(pos:160622..160624);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_002134;product=tRNA-Pro DALFDA020000012.1 tRNAscan-SE exon 160588 160664 . + . ID=exon-O5C65_002134-1;Parent=rna-O5C65_002134;anticodon=(pos:160622..160624);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_002134;product=tRNA-Pro DALFDA020000012.1 tpg pseudogene 160974 161196 . - . ID=gene-O5C65_002135;Name=O5C65_002135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_002135;pseudo=true DALFDA020000012.1 Protein Homology CDS 160974 161196 . - 0 ID=cds-O5C65_002135;Parent=gene-O5C65_002135;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=O5C65_002135;product=DUF4113 domain-containing protein;pseudo=true;transl_table=11 DALFDA020000012.1 tpg gene 161284 161900 . - . ID=gene-O5C65_002136;Name=sspH2;end_range=161900,.;gbkey=Gene;gene=sspH2;gene_biotype=protein_coding;locus_tag=O5C65_002136;partial=true DALFDA020000012.1 Protein Homology CDS 161284 161900 . - 2 ID=cds-HJH9172252.1;Parent=gene-O5C65_002136;Dbxref=NCBI_GP:HJH9172252.1;Name=HJH9172252.1;end_range=161900,.;gbkey=CDS;gene=sspH2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461184.1;locus_tag=O5C65_002136;partial=true;product=SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2;protein_id=HJH9172252.1;transl_table=11 ##sequence-region DALFDA020000013.1 1 148180 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000013.1 tpg region 1 148180 . + . ID=DALFDA020000013.1:1..148180;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000013.1 tpg gene 61 849 . + . ID=gene-O5C65_002137;Name=aadA;gbkey=Gene;gene=aadA;gene_biotype=protein_coding;locus_tag=O5C65_002137 DALFDA020000013.1 Protein Homology CDS 61 849 . + 0 ID=cds-HJH9172253.1;Parent=gene-O5C65_002137;Dbxref=NCBI_GP:HJH9172253.1;Name=HJH9172253.1;gbkey=CDS;gene=aadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460230.1;locus_tag=O5C65_002137;product=cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9);protein_id=HJH9172253.1;transl_table=11 DALFDA020000013.1 tpg gene 994 1587 . + . ID=gene-O5C65_002138;Name=O5C65_002138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002138 DALFDA020000013.1 Protein Homology CDS 994 1587 . + 0 ID=cds-HJH9172254.1;Parent=gene-O5C65_002138;Dbxref=NCBI_GP:HJH9172254.1;Name=HJH9172254.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460231.1;locus_tag=O5C65_002138;product=helix-turn-helix domain-containing protein;protein_id=HJH9172254.1;transl_table=11 DALFDA020000013.1 tpg gene 1656 2504 . + . ID=gene-O5C65_002139;Name=O5C65_002139;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002139 DALFDA020000013.1 Protein Homology CDS 1656 2504 . + 0 ID=cds-HJH9172255.1;Parent=gene-O5C65_002139;Dbxref=NCBI_GP:HJH9172255.1;Name=HJH9172255.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460232.1;locus_tag=O5C65_002139;product=MerR family transcriptional regulator;protein_id=HJH9172255.1;transl_table=11 DALFDA020000013.1 tpg gene 2759 3007 . - . ID=gene-O5C65_002140;Name=O5C65_002140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002140 DALFDA020000013.1 Protein Homology CDS 2759 3007 . - 0 ID=cds-HJH9172256.1;Parent=gene-O5C65_002140;Dbxref=NCBI_GP:HJH9172256.1;Name=HJH9172256.1;Ontology_term=GO:0071468,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460233.1;locus_tag=O5C65_002140;product=biofilm/acid-resistance regulator YmgB/AriR;protein_id=HJH9172256.1;transl_table=11 DALFDA020000013.1 tpg pseudogene 3086 3240 . - . ID=gene-O5C65_002141;Name=O5C65_002141;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_002141;pseudo=true DALFDA020000013.1 Protein Homology CDS 3086 3240 . - 0 ID=cds-O5C65_002141;Parent=gene-O5C65_002141;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460234.1;locus_tag=O5C65_002141;product=hypothetical protein;pseudo=true;transl_table=11 DALFDA020000013.1 tpg gene 3323 3868 . + . ID=gene-O5C65_002142;Name=O5C65_002142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002142 DALFDA020000013.1 Protein Homology CDS 3323 3868 . + 0 ID=cds-HJH9172257.1;Parent=gene-O5C65_002142;Dbxref=NCBI_GP:HJH9172257.1;Name=HJH9172257.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460235.1;locus_tag=O5C65_002142;product=chorismate mutase;protein_id=HJH9172257.1;transl_table=11 DALFDA020000013.1 tpg gene 4066 4704 . + . ID=gene-O5C65_002143;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=O5C65_002143 DALFDA020000013.1 Protein Homology CDS 4066 4704 . + 0 ID=cds-HJH9172258.1;Parent=gene-O5C65_002143;Dbxref=NCBI_GP:HJH9172258.1;Name=HJH9172258.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460236.1;locus_tag=O5C65_002143;product=leucine efflux protein LeuE;protein_id=HJH9172258.1;transl_table=11 DALFDA020000013.1 tpg gene 4877 5239 . + . ID=gene-O5C65_002144;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=O5C65_002144 DALFDA020000013.1 Protein Homology CDS 4877 5239 . + 0 ID=cds-HJH9172259.1;Parent=gene-O5C65_002144;Dbxref=NCBI_GP:HJH9172259.1;Name=HJH9172259.1;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460237.1;locus_tag=O5C65_002144;product=DUF1971 domain-containing protein YeaR;protein_id=HJH9172259.1;transl_table=11 DALFDA020000013.1 tpg gene 5242 5424 . + . ID=gene-O5C65_002145;Name=O5C65_002145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002145 DALFDA020000013.1 Protein Homology CDS 5242 5424 . + 0 ID=cds-HJH9172260.1;Parent=gene-O5C65_002145;Dbxref=NCBI_GP:HJH9172260.1;Name=HJH9172260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460238.1;locus_tag=O5C65_002145;product=DUF1869 domain-containing protein;protein_id=HJH9172260.1;transl_table=11 DALFDA020000013.1 tpg gene 5654 6295 . + . ID=gene-O5C65_002146;Name=O5C65_002146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002146 DALFDA020000013.1 Protein Homology CDS 5654 6295 . + 0 ID=cds-HJH9172261.1;Parent=gene-O5C65_002146;Dbxref=NCBI_GP:HJH9172261.1;Name=HJH9172261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460239.1;locus_tag=O5C65_002146;product=hypothetical protein;protein_id=HJH9172261.1;transl_table=11 DALFDA020000013.1 tpg gene 6609 6857 . + . ID=gene-O5C65_002147;Name=O5C65_002147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002147 DALFDA020000013.1 Protein Homology CDS 6609 6857 . + 0 ID=cds-HJH9172262.1;Parent=gene-O5C65_002147;Dbxref=NCBI_GP:HJH9172262.1;Name=HJH9172262.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460240.1;locus_tag=O5C65_002147;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=HJH9172262.1;transl_table=11 DALFDA020000013.1 tpg gene 6997 7095 . - . ID=gene-O5C65_002148;Name=O5C65_002148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002148 DALFDA020000013.1 Protein Homology CDS 6997 7095 . - 0 ID=cds-HJH9172263.1;Parent=gene-O5C65_002148;Dbxref=NCBI_GP:HJH9172263.1;Name=HJH9172263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=O5C65_002148;product=YoaK family small membrane protein;protein_id=HJH9172263.1;transl_table=11 DALFDA020000013.1 tpg gene 7291 7542 . + . ID=gene-O5C65_002149;Name=O5C65_002149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002149 DALFDA020000013.1 Protein Homology CDS 7291 7542 . + 0 ID=cds-HJH9172264.1;Parent=gene-O5C65_002149;Dbxref=NCBI_GP:HJH9172264.1;Name=HJH9172264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460241.1;locus_tag=O5C65_002149;product=putative hemolysin;protein_id=HJH9172264.1;transl_table=11 DALFDA020000013.1 tpg gene 7611 7922 . + . ID=gene-O5C65_002150;Name=O5C65_002150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002150 DALFDA020000013.1 Protein Homology CDS 7611 7922 . + 0 ID=cds-HJH9172265.1;Parent=gene-O5C65_002150;Dbxref=NCBI_GP:HJH9172265.1;Name=HJH9172265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460242.1;locus_tag=O5C65_002150;product=hypothetical protein;protein_id=HJH9172265.1;transl_table=11 DALFDA020000013.1 tpg gene 7908 8255 . - . ID=gene-O5C65_002151;Name=O5C65_002151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002151 DALFDA020000013.1 Protein Homology CDS 7908 8255 . - 0 ID=cds-HJH9172266.1;Parent=gene-O5C65_002151;Dbxref=NCBI_GP:HJH9172266.1;Name=HJH9172266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460243.1;locus_tag=O5C65_002151;product=DUF488 domain-containing protein;protein_id=HJH9172266.1;transl_table=11 DALFDA020000013.1 tpg gene 8374 9558 . - . ID=gene-O5C65_002152;Name=O5C65_002152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002152 DALFDA020000013.1 Protein Homology CDS 8374 9558 . - 0 ID=cds-HJH9172267.1;Parent=gene-O5C65_002152;Dbxref=NCBI_GP:HJH9172267.1;Name=HJH9172267.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460244.1;locus_tag=O5C65_002152;product=CynX/NimT family MFS transporter;protein_id=HJH9172267.1;transl_table=11 DALFDA020000013.1 tpg gene 9659 10453 . + . ID=gene-O5C65_002153;Name=O5C65_002153;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002153 DALFDA020000013.1 Protein Homology CDS 9659 10453 . + 0 ID=cds-HJH9172268.1;Parent=gene-O5C65_002153;Dbxref=NCBI_GP:HJH9172268.1;Name=HJH9172268.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460245.1;locus_tag=O5C65_002153;product=AraC family transcriptional regulator;protein_id=HJH9172268.1;transl_table=11 DALFDA020000013.1 tpg gene 10433 10879 . - . ID=gene-O5C65_002154;Name=O5C65_002154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002154 DALFDA020000013.1 Protein Homology CDS 10433 10879 . - 0 ID=cds-HJH9172269.1;Parent=gene-O5C65_002154;Dbxref=NCBI_GP:HJH9172269.1;Name=HJH9172269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460246.2;locus_tag=O5C65_002154;product=DUF441 domain-containing protein;protein_id=HJH9172269.1;transl_table=11 DALFDA020000013.1 tpg gene 11085 11192 . + . ID=gene-O5C65_002155;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=O5C65_002155 DALFDA020000013.1 Protein Homology CDS 11085 11192 . + 0 ID=cds-HJH9172270.1;Parent=gene-O5C65_002155;Dbxref=NCBI_GP:HJH9172270.1;Name=HJH9172270.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460247.1;locus_tag=O5C65_002155;product=small membrane protein YoaI;protein_id=HJH9172270.1;transl_table=11 DALFDA020000013.1 tpg gene 11189 11707 . - . ID=gene-O5C65_002156;Name=O5C65_002156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002156 DALFDA020000013.1 Protein Homology CDS 11189 11707 . - 0 ID=cds-HJH9172271.1;Parent=gene-O5C65_002156;Dbxref=NCBI_GP:HJH9172271.1;Name=HJH9172271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460248.1;locus_tag=O5C65_002156;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=HJH9172271.1;transl_table=11 DALFDA020000013.1 tpg gene 11757 13250 . - . ID=gene-O5C65_002157;Name=dgcJ;gbkey=Gene;gene=dgcJ;gene_biotype=protein_coding;locus_tag=O5C65_002157 DALFDA020000013.1 Protein Homology CDS 11757 13250 . - 0 ID=cds-HJH9172272.1;Parent=gene-O5C65_002157;Dbxref=NCBI_GP:HJH9172272.1;Name=HJH9172272.1;Ontology_term=GO:0043709,GO:1902201,GO:0052621;gbkey=CDS;gene=dgcJ;go_function=diguanylate cyclase activity|0052621||IEA;go_process=cell adhesion involved in single-species biofilm formation|0043709||IEA,negative regulation of bacterial-type flagellum-dependent cell motility|1902201||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460249.1;locus_tag=O5C65_002157;product=diguanylate cyclase DgcJ;protein_id=HJH9172272.1;transl_table=11 DALFDA020000013.1 tpg gene 13545 13745 . + . ID=gene-O5C65_002158;Name=O5C65_002158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002158 DALFDA020000013.1 GeneMarkS-2+ CDS 13545 13745 . + 0 ID=cds-HJH9172273.1;Parent=gene-O5C65_002158;Dbxref=NCBI_GP:HJH9172273.1;Name=HJH9172273.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_002158;product=hypothetical protein;protein_id=HJH9172273.1;transl_table=11 DALFDA020000013.1 tpg gene 13890 15176 . - . ID=gene-O5C65_002159;Name=O5C65_002159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002159 DALFDA020000013.1 Protein Homology CDS 13890 15176 . - 0 ID=cds-HJH9172274.1;Parent=gene-O5C65_002159;Dbxref=NCBI_GP:HJH9172274.1;Name=HJH9172274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460250.1;locus_tag=O5C65_002159;product=YeaH/YhbH family protein;protein_id=HJH9172274.1;transl_table=11 DALFDA020000013.1 tpg gene 15299 17233 . - . ID=gene-O5C65_002160;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=O5C65_002160 DALFDA020000013.1 Protein Homology CDS 15299 17233 . - 0 ID=cds-HJH9172275.1;Parent=gene-O5C65_002160;Dbxref=NCBI_GP:HJH9172275.1;Name=HJH9172275.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411173.1;locus_tag=O5C65_002160;product=protein kinase YeaG;protein_id=HJH9172275.1;transl_table=11 DALFDA020000013.1 tpg gene 17660 18406 . + . ID=gene-O5C65_002161;Name=O5C65_002161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002161 DALFDA020000013.1 Protein Homology CDS 17660 18406 . + 0 ID=cds-HJH9172276.1;Parent=gene-O5C65_002161;Dbxref=NCBI_GP:HJH9172276.1;Name=HJH9172276.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460252.1;locus_tag=O5C65_002161;product=MipA/OmpV family protein;protein_id=HJH9172276.1;transl_table=11 DALFDA020000013.1 tpg gene 18696 19892 . + . ID=gene-O5C65_002162;Name=O5C65_002162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002162 DALFDA020000013.1 Protein Homology CDS 18696 19892 . + 0 ID=cds-HJH9172277.1;Parent=gene-O5C65_002162;Dbxref=NCBI_GP:HJH9172277.1;Name=HJH9172277.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460253.1;locus_tag=O5C65_002162;product=anaerobic sulfatase maturase;protein_id=HJH9172277.1;transl_table=11 DALFDA020000013.1 tpg gene 19990 20847 . + . ID=gene-O5C65_002163;Name=O5C65_002163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002163 DALFDA020000013.1 Protein Homology CDS 19990 20847 . + 0 ID=cds-HJH9172278.1;Parent=gene-O5C65_002163;Dbxref=NCBI_GP:HJH9172278.1;Name=HJH9172278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460254.1;locus_tag=O5C65_002163;product=aldo/keto reductase;protein_id=HJH9172278.1;transl_table=11 DALFDA020000013.1 tpg gene 20946 21830 . - . ID=gene-O5C65_002164;Name=O5C65_002164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002164 DALFDA020000013.1 Protein Homology CDS 20946 21830 . - 0 ID=cds-HJH9172279.1;Parent=gene-O5C65_002164;Dbxref=NCBI_GP:HJH9172279.1;Name=HJH9172279.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460255.1;locus_tag=O5C65_002164;product=D-hexose-6-phosphate mutarotase;protein_id=HJH9172279.1;transl_table=11 DALFDA020000013.1 tpg gene 22165 23160 . - . ID=gene-O5C65_002165;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=O5C65_002165 DALFDA020000013.1 Protein Homology CDS 22165 23160 . - 0 ID=cds-HJH9172280.1;Parent=gene-O5C65_002165;Dbxref=NCBI_GP:HJH9172280.1;Name=HJH9172280.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=O5C65_002165;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=HJH9172280.1;transl_table=11 DALFDA020000013.1 tpg gene 23502 23915 . + . ID=gene-O5C65_002166;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=O5C65_002166 DALFDA020000013.1 Protein Homology CDS 23502 23915 . + 0 ID=cds-HJH9172281.1;Parent=gene-O5C65_002166;Dbxref=NCBI_GP:HJH9172281.1;Name=HJH9172281.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=O5C65_002166;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=HJH9172281.1;transl_table=11 DALFDA020000013.1 tpg gene 23957 24235 . + . ID=gene-O5C65_002167;Name=O5C65_002167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002167 DALFDA020000013.1 Protein Homology CDS 23957 24235 . + 0 ID=cds-HJH9172282.1;Parent=gene-O5C65_002167;Dbxref=NCBI_GP:HJH9172282.1;Name=HJH9172282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460258.1;locus_tag=O5C65_002167;product=YeaC family protein;protein_id=HJH9172282.1;transl_table=11 DALFDA020000013.1 tpg pseudogene 24338 24835 . - . ID=gene-O5C65_002168;Name=O5C65_002168;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_002168;pseudo=true DALFDA020000013.1 Protein Homology CDS 24338 24835 . - 0 ID=cds-O5C65_002168;Parent=gene-O5C65_002168;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884440.1;locus_tag=O5C65_002168;product=glycosyl hydrolase family 18 protein;pseudo=true;transl_table=11 DALFDA020000013.1 tpg gene 25128 26204 . + . ID=gene-O5C65_002169;Name=O5C65_002169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002169 DALFDA020000013.1 Protein Homology CDS 25128 26204 . + 0 ID=cds-HJH9172283.1;Parent=gene-O5C65_002169;Dbxref=NCBI_GP:HJH9172283.1;Name=HJH9172283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310512.1;locus_tag=O5C65_002169;product=zinc-binding dehydrogenase;protein_id=HJH9172283.1;transl_table=11 DALFDA020000013.1 tpg gene 26231 27610 . + . ID=gene-O5C65_002170;Name=O5C65_002170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002170 DALFDA020000013.1 Protein Homology CDS 26231 27610 . + 0 ID=cds-HJH9172284.1;Parent=gene-O5C65_002170;Dbxref=NCBI_GP:HJH9172284.1;Name=HJH9172284.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416289.1;locus_tag=O5C65_002170;product=MFS transporter;protein_id=HJH9172284.1;transl_table=11 DALFDA020000013.1 tpg gene 27621 28664 . + . ID=gene-O5C65_002171;Name=O5C65_002171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002171 DALFDA020000013.1 Protein Homology CDS 27621 28664 . + 0 ID=cds-HJH9172285.1;Parent=gene-O5C65_002171;Dbxref=NCBI_GP:HJH9172285.1;Name=HJH9172285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416288.1;locus_tag=O5C65_002171;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=HJH9172285.1;transl_table=11 DALFDA020000013.1 tpg gene 28686 29522 . + . ID=gene-O5C65_002172;Name=O5C65_002172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002172 DALFDA020000013.1 Protein Homology CDS 28686 29522 . + 0 ID=cds-HJH9172286.1;Parent=gene-O5C65_002172;Dbxref=NCBI_GP:HJH9172286.1;Name=HJH9172286.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416287.1;locus_tag=O5C65_002172;product=ketose-bisphosphate aldolase;protein_id=HJH9172286.1;transl_table=11 DALFDA020000013.1 tpg gene 29527 30474 . + . ID=gene-O5C65_002173;Name=O5C65_002173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002173 DALFDA020000013.1 Protein Homology CDS 29527 30474 . + 0 ID=cds-HJH9172287.1;Parent=gene-O5C65_002173;Dbxref=NCBI_GP:HJH9172287.1;Name=HJH9172287.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416286.4;locus_tag=O5C65_002173;product=sugar kinase;protein_id=HJH9172287.1;transl_table=11 DALFDA020000013.1 tpg gene 30484 31467 . + . ID=gene-O5C65_002174;Name=ydjG;gbkey=Gene;gene=ydjG;gene_biotype=protein_coding;locus_tag=O5C65_002174 DALFDA020000013.1 Protein Homology CDS 30484 31467 . + 0 ID=cds-HJH9172288.1;Parent=gene-O5C65_002174;Dbxref=NCBI_GP:HJH9172288.1;Name=HJH9172288.1;Ontology_term=GO:0019170;gbkey=CDS;gene=ydjG;go_function=methylglyoxal reductase (NADH) activity|0019170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000782140.1;locus_tag=O5C65_002174;product=NADH-dependent methylglyoxal reductase;protein_id=HJH9172288.1;transl_table=11 DALFDA020000013.1 tpg gene 31597 32355 . + . ID=gene-O5C65_002175;Name=O5C65_002175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002175 DALFDA020000013.1 Protein Homology CDS 31597 32355 . + 0 ID=cds-HJH9172289.1;Parent=gene-O5C65_002175;Dbxref=NCBI_GP:HJH9172289.1;Name=HJH9172289.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226392.1;locus_tag=O5C65_002175;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=HJH9172289.1;transl_table=11 DALFDA020000013.1 tpg gene 32491 33849 . + . ID=gene-O5C65_002176;Name=O5C65_002176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002176 DALFDA020000013.1 Protein Homology CDS 32491 33849 . + 0 ID=cds-HJH9172290.1;Parent=gene-O5C65_002176;Dbxref=NCBI_GP:HJH9172290.1;Name=HJH9172290.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000389924.1;locus_tag=O5C65_002176;product=MFS transporter;protein_id=HJH9172290.1;transl_table=11 DALFDA020000013.1 tpg gene 33952 34608 . - . ID=gene-O5C65_002177;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=O5C65_002177 DALFDA020000013.1 Protein Homology CDS 33952 34608 . - 0 ID=cds-HJH9172291.1;Parent=gene-O5C65_002177;Dbxref=NCBI_GP:HJH9172291.1;Name=HJH9172291.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460259.1;locus_tag=O5C65_002177;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=HJH9172291.1;transl_table=11 DALFDA020000013.1 tpg gene 34635 35651 . - . ID=gene-O5C65_002178;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=O5C65_002178 DALFDA020000013.1 Protein Homology CDS 34635 35651 . - 0 ID=cds-HJH9172292.1;Parent=gene-O5C65_002178;Dbxref=NCBI_GP:HJH9172292.1;Name=HJH9172292.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460260.1;locus_tag=O5C65_002178;product=asparaginase;protein_id=HJH9172292.1;transl_table=11 DALFDA020000013.1 tpg gene 35747 37603 . - . ID=gene-O5C65_002179;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=O5C65_002179 DALFDA020000013.1 Protein Homology CDS 35747 37603 . - 0 ID=cds-HJH9172293.1;Parent=gene-O5C65_002179;Dbxref=NCBI_GP:HJH9172293.1;Name=HJH9172293.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460261.1;locus_tag=O5C65_002179;product=signal peptide peptidase SppA;protein_id=HJH9172293.1;transl_table=11 DALFDA020000013.1 tpg gene 37777 38328 . + . ID=gene-O5C65_002180;Name=O5C65_002180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002180 DALFDA020000013.1 Protein Homology CDS 37777 38328 . + 0 ID=cds-HJH9172294.1;Parent=gene-O5C65_002180;Dbxref=NCBI_GP:HJH9172294.1;Name=HJH9172294.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460262.1;locus_tag=O5C65_002180;product=NAD(P)H nitroreductase;protein_id=HJH9172294.1;transl_table=11 DALFDA020000013.1 tpg gene 38446 39489 . + . ID=gene-O5C65_002181;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=O5C65_002181 DALFDA020000013.1 Protein Homology CDS 38446 39489 . + 0 ID=cds-HJH9172295.1;Parent=gene-O5C65_002181;Dbxref=NCBI_GP:HJH9172295.1;Name=HJH9172295.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460263.1;locus_tag=O5C65_002181;product=selenide%2C water dikinase SelD;protein_id=HJH9172295.1;transl_table=11 DALFDA020000013.1 tpg gene 39494 41443 . + . ID=gene-O5C65_002182;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=O5C65_002182 DALFDA020000013.1 Protein Homology CDS 39494 41443 . + 0 ID=cds-HJH9172296.1;Parent=gene-O5C65_002182;Dbxref=NCBI_GP:HJH9172296.1;Name=HJH9172296.1;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460264.1;locus_tag=O5C65_002182;product=DNA topoisomerase III;protein_id=HJH9172296.1;transl_table=11 DALFDA020000013.1 tpg gene 41473 42816 . - . ID=gene-O5C65_002183;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=O5C65_002183 DALFDA020000013.1 Protein Homology CDS 41473 42816 . - 0 ID=cds-HJH9172297.1;Parent=gene-O5C65_002183;Dbxref=NCBI_GP:HJH9172297.1;Name=HJH9172297.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460265.1;locus_tag=O5C65_002183;product=NADP-specific glutamate dehydrogenase;protein_id=HJH9172297.1;transl_table=11 DALFDA020000013.1 tpg gene 43055 43330 . + . ID=gene-O5C65_002184;Name=O5C65_002184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002184 DALFDA020000013.1 Protein Homology CDS 43055 43330 . + 0 ID=cds-HJH9172298.1;Parent=gene-O5C65_002184;Dbxref=NCBI_GP:HJH9172298.1;Name=HJH9172298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465441.1;locus_tag=O5C65_002184;product=YnjH family protein;protein_id=HJH9172298.1;transl_table=11 DALFDA020000013.1 tpg gene 43290 43706 . - . ID=gene-O5C65_002185;Name=O5C65_002185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002185 DALFDA020000013.1 Protein Homology CDS 43290 43706 . - 0 ID=cds-HJH9172299.1;Parent=gene-O5C65_002185;Dbxref=NCBI_GP:HJH9172299.1;Name=HJH9172299.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460267.1;locus_tag=O5C65_002185;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=HJH9172299.1;transl_table=11 DALFDA020000013.1 tpg gene 43779 44585 . - . ID=gene-O5C65_002186;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=O5C65_002186 DALFDA020000013.1 Protein Homology CDS 43779 44585 . - 0 ID=cds-HJH9172300.1;Parent=gene-O5C65_002186;Dbxref=NCBI_GP:HJH9172300.1;Name=HJH9172300.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460268.1;locus_tag=O5C65_002186;product=exodeoxyribonuclease III;protein_id=HJH9172300.1;transl_table=11 DALFDA020000013.1 tpg gene 45031 46257 . + . ID=gene-O5C65_002187;Name=O5C65_002187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002187 DALFDA020000013.1 Protein Homology CDS 45031 46257 . + 0 ID=cds-HJH9172301.1;Parent=gene-O5C65_002187;Dbxref=NCBI_GP:HJH9172301.1;Name=HJH9172301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460269.1;locus_tag=O5C65_002187;product=aspartate aminotransferase family protein;protein_id=HJH9172301.1;transl_table=11 DALFDA020000013.1 tpg gene 46248 47282 . + . ID=gene-O5C65_002188;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=O5C65_002188 DALFDA020000013.1 Protein Homology CDS 46248 47282 . + 0 ID=cds-HJH9172302.1;Parent=gene-O5C65_002188;Dbxref=NCBI_GP:HJH9172302.1;Name=HJH9172302.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460270.1;locus_tag=O5C65_002188;product=arginine N-succinyltransferase;protein_id=HJH9172302.1;transl_table=11 DALFDA020000013.1 tpg gene 47279 48757 . + . ID=gene-O5C65_002189;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=O5C65_002189 DALFDA020000013.1 Protein Homology CDS 47279 48757 . + 0 ID=cds-HJH9172303.1;Parent=gene-O5C65_002189;Dbxref=NCBI_GP:HJH9172303.1;Name=HJH9172303.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460271.1;locus_tag=O5C65_002189;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=HJH9172303.1;transl_table=11 DALFDA020000013.1 tpg gene 48754 50097 . + . ID=gene-O5C65_002190;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=O5C65_002190 DALFDA020000013.1 Protein Homology CDS 48754 50097 . + 0 ID=cds-HJH9172304.1;Parent=gene-O5C65_002190;Dbxref=NCBI_GP:HJH9172304.1;Name=HJH9172304.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460272.1;locus_tag=O5C65_002190;product=N-succinylarginine dihydrolase;protein_id=HJH9172304.1;transl_table=11 DALFDA020000013.1 tpg gene 50090 51058 . + . ID=gene-O5C65_002191;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=O5C65_002191 DALFDA020000013.1 Protein Homology CDS 50090 51058 . + 0 ID=cds-HJH9172305.1;Parent=gene-O5C65_002191;Dbxref=NCBI_GP:HJH9172305.1;Name=HJH9172305.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460273.1;locus_tag=O5C65_002191;product=succinylglutamate desuccinylase;protein_id=HJH9172305.1;transl_table=11 DALFDA020000013.1 tpg gene 51394 51879 . + . ID=gene-O5C65_002192;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=O5C65_002192 DALFDA020000013.1 Protein Homology CDS 51394 51879 . + 0 ID=cds-HJH9172306.1;Parent=gene-O5C65_002192;Dbxref=NCBI_GP:HJH9172306.1;Name=HJH9172306.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460274.1;locus_tag=O5C65_002192;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=HJH9172306.1;transl_table=11 DALFDA020000013.1 tpg gene 51954 52835 . - . ID=gene-O5C65_002193;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=O5C65_002193 DALFDA020000013.1 Protein Homology CDS 51954 52835 . - 0 ID=cds-HJH9172307.1;Parent=gene-O5C65_002193;Dbxref=NCBI_GP:HJH9172307.1;Name=HJH9172307.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233065.1;locus_tag=O5C65_002193;product=excinuclease Cho;protein_id=HJH9172307.1;transl_table=11 DALFDA020000013.1 tpg gene 52956 53783 . - . ID=gene-O5C65_002194;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=O5C65_002194 DALFDA020000013.1 Protein Homology CDS 52956 53783 . - 0 ID=cds-HJH9172308.1;Parent=gene-O5C65_002194;Dbxref=NCBI_GP:HJH9172308.1;Name=HJH9172308.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460276.1;locus_tag=O5C65_002194;product=ammonia-dependent NAD(+) synthetase;protein_id=HJH9172308.1;transl_table=11 DALFDA020000013.1 tpg gene 54002 54343 . + . ID=gene-O5C65_002195;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=O5C65_002195 DALFDA020000013.1 Protein Homology CDS 54002 54343 . + 0 ID=cds-HJH9172309.1;Parent=gene-O5C65_002195;Dbxref=NCBI_GP:HJH9172309.1;Name=HJH9172309.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460277.1;locus_tag=O5C65_002195;product=osmotically-inducible lipoprotein OsmE;protein_id=HJH9172309.1;transl_table=11 DALFDA020000013.1 tpg gene 54644 54964 . + . ID=gene-O5C65_002196;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=O5C65_002196 DALFDA020000013.1 Protein Homology CDS 54644 54964 . + 0 ID=cds-HJH9172310.1;Parent=gene-O5C65_002196;Dbxref=NCBI_GP:HJH9172310.1;Name=HJH9172310.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460278.1;locus_tag=O5C65_002196;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=HJH9172310.1;transl_table=11 DALFDA020000013.1 tpg gene 55047 56405 . + . ID=gene-O5C65_002197;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=O5C65_002197 DALFDA020000013.1 Protein Homology CDS 55047 56405 . + 0 ID=cds-HJH9172311.1;Parent=gene-O5C65_002197;Dbxref=NCBI_GP:HJH9172311.1;Name=HJH9172311.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460279.1;locus_tag=O5C65_002197;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=HJH9172311.1;transl_table=11 DALFDA020000013.1 tpg gene 56456 56803 . + . ID=gene-O5C65_002198;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=O5C65_002198 DALFDA020000013.1 Protein Homology CDS 56456 56803 . + 0 ID=cds-HJH9172312.1;Parent=gene-O5C65_002198;Dbxref=NCBI_GP:HJH9172312.1;Name=HJH9172312.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460280.1;locus_tag=O5C65_002198;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=HJH9172312.1;transl_table=11 DALFDA020000013.1 tpg gene 56814 57656 . + . ID=gene-O5C65_002199;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=O5C65_002199 DALFDA020000013.1 Protein Homology CDS 56814 57656 . + 0 ID=cds-HJH9172313.1;Parent=gene-O5C65_002199;Dbxref=NCBI_GP:HJH9172313.1;Name=HJH9172313.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460281.1;locus_tag=O5C65_002199;product=transcriptional regulator ChbR;protein_id=HJH9172313.1;transl_table=11 DALFDA020000013.1 tpg gene 57781 59136 . + . ID=gene-O5C65_002200;Name=O5C65_002200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002200 DALFDA020000013.1 Protein Homology CDS 57781 59136 . + 0 ID=cds-HJH9172314.1;Parent=gene-O5C65_002200;Dbxref=NCBI_GP:HJH9172314.1;Name=HJH9172314.1;Ontology_term=GO:0005975,GO:0008706,GO:0046872;gbkey=CDS;go_function=6-phospho-beta-glucosidase activity|0008706||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460282.1;locus_tag=O5C65_002200;product=6-phospho-beta-glucosidase;protein_id=HJH9172314.1;transl_table=11 DALFDA020000013.1 tpg gene 59149 59907 . + . ID=gene-O5C65_002201;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=O5C65_002201 DALFDA020000013.1 Protein Homology CDS 59149 59907 . + 0 ID=cds-HJH9172315.1;Parent=gene-O5C65_002201;Dbxref=NCBI_GP:HJH9172315.1;Name=HJH9172315.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460283.1;locus_tag=O5C65_002201;product=chitin disaccharide deacetylase;protein_id=HJH9172315.1;transl_table=11 DALFDA020000013.1 tpg gene 59951 62203 . - . ID=gene-O5C65_002202;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=O5C65_002202 DALFDA020000013.1 Protein Homology CDS 59951 62203 . - 0 ID=cds-HJH9172316.1;Parent=gene-O5C65_002202;Dbxref=NCBI_GP:HJH9172316.1;Name=HJH9172316.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460284.1;locus_tag=O5C65_002202;product=catalase HPII;protein_id=HJH9172316.1;transl_table=11 DALFDA020000013.1 tpg gene 62420 62662 . + . ID=gene-O5C65_002203;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=O5C65_002203 DALFDA020000013.1 Protein Homology CDS 62420 62662 . + 0 ID=cds-HJH9172317.1;Parent=gene-O5C65_002203;Dbxref=NCBI_GP:HJH9172317.1;Name=HJH9172317.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460285.1;locus_tag=O5C65_002203;product=cell division activator CedA;protein_id=HJH9172317.1;transl_table=11 DALFDA020000013.1 tpg gene 62765 64156 . - . ID=gene-O5C65_002204;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=O5C65_002204 DALFDA020000013.1 Protein Homology CDS 62765 64156 . - 0 ID=cds-HJH9172318.1;Parent=gene-O5C65_002204;Dbxref=NCBI_GP:HJH9172318.1;Name=HJH9172318.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=O5C65_002204;product=cystine/sulfocysteine:cation symporter;protein_id=HJH9172318.1;transl_table=11 DALFDA020000013.1 tpg gene 64293 64892 . - . ID=gene-O5C65_002205;Name=O5C65_002205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002205 DALFDA020000013.1 Protein Homology CDS 64293 64892 . - 0 ID=cds-HJH9172319.1;Parent=gene-O5C65_002205;Dbxref=NCBI_GP:HJH9172319.1;Name=HJH9172319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460287.3;locus_tag=O5C65_002205;product=metal-dependent hydrolase;protein_id=HJH9172319.1;transl_table=11 DALFDA020000013.1 tpg gene 65030 65698 . - . ID=gene-O5C65_002206;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=O5C65_002206 DALFDA020000013.1 Protein Homology CDS 65030 65698 . - 0 ID=cds-HJH9172320.1;Parent=gene-O5C65_002206;Dbxref=NCBI_GP:HJH9172320.1;Name=HJH9172320.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460288.1;locus_tag=O5C65_002206;product=hexitol phosphatase HxpB;protein_id=HJH9172320.1;transl_table=11 DALFDA020000013.1 tpg gene 65847 66383 . + . ID=gene-O5C65_002207;Name=O5C65_002207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002207 DALFDA020000013.1 Protein Homology CDS 65847 66383 . + 0 ID=cds-HJH9172321.1;Parent=gene-O5C65_002207;Dbxref=NCBI_GP:HJH9172321.1;Name=HJH9172321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460289.1;locus_tag=O5C65_002207;product=YniB family protein;protein_id=HJH9172321.1;transl_table=11 DALFDA020000013.1 tpg gene 66426 67286 . - . ID=gene-O5C65_002208;Name=O5C65_002208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002208 DALFDA020000013.1 Protein Homology CDS 66426 67286 . - 0 ID=cds-HJH9172322.1;Parent=gene-O5C65_002208;Dbxref=NCBI_GP:HJH9172322.1;Name=HJH9172322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460290.1;locus_tag=O5C65_002208;product=fructosamine kinase family protein;protein_id=HJH9172322.1;transl_table=11 DALFDA020000013.1 tpg gene 67393 67683 . - . ID=gene-O5C65_002209;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=O5C65_002209 DALFDA020000013.1 Protein Homology CDS 67393 67683 . - 0 ID=cds-HJH9172323.1;Parent=gene-O5C65_002209;Dbxref=NCBI_GP:HJH9172323.1;Name=HJH9172323.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460291.1;locus_tag=O5C65_002209;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=HJH9172323.1;transl_table=11 DALFDA020000013.1 tpg gene 67780 68712 . - . ID=gene-O5C65_002210;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=O5C65_002210 DALFDA020000013.1 Protein Homology CDS 67780 68712 . - 0 ID=cds-HJH9172324.1;Parent=gene-O5C65_002210;Dbxref=NCBI_GP:HJH9172324.1;Name=HJH9172324.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460292.1;locus_tag=O5C65_002210;product=6-phosphofructokinase II;protein_id=HJH9172324.1;transl_table=11 DALFDA020000013.1 tpg gene 69001 69759 . + . ID=gene-O5C65_002211;Name=O5C65_002211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002211 DALFDA020000013.1 Protein Homology CDS 69001 69759 . + 0 ID=cds-HJH9172325.1;Parent=gene-O5C65_002211;Dbxref=NCBI_GP:HJH9172325.1;Name=HJH9172325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460293.1;locus_tag=O5C65_002211;product=DUF481 domain-containing protein;protein_id=HJH9172325.1;transl_table=11 DALFDA020000013.1 tpg gene 69808 70767 . - . ID=gene-O5C65_002212;Name=O5C65_002212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002212 DALFDA020000013.1 Protein Homology CDS 69808 70767 . - 0 ID=cds-HJH9172326.1;Parent=gene-O5C65_002212;Dbxref=NCBI_GP:HJH9172326.1;Name=HJH9172326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460294.1;locus_tag=O5C65_002212;product=lipid A deacylase LpxR family protein;protein_id=HJH9172326.1;transl_table=11 DALFDA020000013.1 tpg gene 70909 71223 . + . ID=gene-O5C65_002213;Name=O5C65_002213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002213 DALFDA020000013.1 Protein Homology CDS 70909 71223 . + 0 ID=cds-HJH9172327.1;Parent=gene-O5C65_002213;Dbxref=NCBI_GP:HJH9172327.1;Name=HJH9172327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460295.1;locus_tag=O5C65_002213;product=hypothetical protein;protein_id=HJH9172327.1;transl_table=11 DALFDA020000013.1 tpg gene 71220 72074 . + . ID=gene-O5C65_002214;Name=O5C65_002214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002214 DALFDA020000013.1 Protein Homology CDS 71220 72074 . + 0 ID=cds-HJH9172328.1;Parent=gene-O5C65_002214;Dbxref=NCBI_GP:HJH9172328.1;Name=HJH9172328.1;Ontology_term=GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460296.1;locus_tag=O5C65_002214;product=DNA/RNA non-specific endonuclease;protein_id=HJH9172328.1;transl_table=11 DALFDA020000013.1 tpg gene 72334 74262 . + . ID=gene-O5C65_002215;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=O5C65_002215 DALFDA020000013.1 Protein Homology CDS 72334 74262 . + 0 ID=cds-HJH9172329.1;Parent=gene-O5C65_002215;Dbxref=NCBI_GP:HJH9172329.1;Name=HJH9172329.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=O5C65_002215;product=threonine--tRNA ligase;protein_id=HJH9172329.1;transl_table=11 DALFDA020000013.1 tpg gene 74266 74808 . + . ID=gene-O5C65_002216;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=O5C65_002216 DALFDA020000013.1 Protein Homology CDS 74266 74808 . + 0 ID=cds-HJH9172330.1;Parent=gene-O5C65_002216;Dbxref=NCBI_GP:HJH9172330.1;Name=HJH9172330.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=O5C65_002216;product=translation initiation factor IF-3;protein_id=HJH9172330.1;transl_table=11 DALFDA020000013.1 tpg gene 74904 75101 . + . ID=gene-O5C65_002217;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=O5C65_002217 DALFDA020000013.1 Protein Homology CDS 74904 75101 . + 0 ID=cds-HJH9172331.1;Parent=gene-O5C65_002217;Dbxref=NCBI_GP:HJH9172331.1;Name=HJH9172331.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=O5C65_002217;product=50S ribosomal protein L35;protein_id=HJH9172331.1;transl_table=11 DALFDA020000013.1 tpg gene 75152 75508 . + . ID=gene-O5C65_002218;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=O5C65_002218 DALFDA020000013.1 Protein Homology CDS 75152 75508 . + 0 ID=cds-HJH9172332.1;Parent=gene-O5C65_002218;Dbxref=NCBI_GP:HJH9172332.1;Name=HJH9172332.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=O5C65_002218;product=50S ribosomal protein L20;protein_id=HJH9172332.1;transl_table=11 DALFDA020000013.1 cmsearch sequence_feature 75624 75747 . + . ID=id-DALFDA020000013.1:75624..75747;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 DALFDA020000013.1 tpg gene 75629 75673 . + . ID=gene-O5C65_002219;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=O5C65_002219 DALFDA020000013.1 Protein Homology CDS 75629 75673 . + 0 ID=cds-HJH9172333.1;Parent=gene-O5C65_002219;Dbxref=NCBI_GP:HJH9172333.1;Name=HJH9172333.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=O5C65_002219;product=pheST operon leader peptide PheM;protein_id=HJH9172333.1;transl_table=11 DALFDA020000013.1 tpg gene 75810 76793 . + . ID=gene-O5C65_002220;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=O5C65_002220 DALFDA020000013.1 Protein Homology CDS 75810 76793 . + 0 ID=cds-HJH9172334.1;Parent=gene-O5C65_002220;Dbxref=NCBI_GP:HJH9172334.1;Name=HJH9172334.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=O5C65_002220;product=phenylalanine--tRNA ligase subunit alpha;protein_id=HJH9172334.1;transl_table=11 DALFDA020000013.1 tpg gene 76809 79196 . + . ID=gene-O5C65_002221;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=O5C65_002221 DALFDA020000013.1 Protein Homology CDS 76809 79196 . + 0 ID=cds-HJH9172335.1;Parent=gene-O5C65_002221;Dbxref=NCBI_GP:HJH9172335.1;Name=HJH9172335.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460304.1;locus_tag=O5C65_002221;product=phenylalanine--tRNA ligase subunit beta;protein_id=HJH9172335.1;transl_table=11 DALFDA020000013.1 tpg gene 79201 79500 . + . ID=gene-O5C65_002222;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=O5C65_002222 DALFDA020000013.1 Protein Homology CDS 79201 79500 . + 0 ID=cds-HJH9172336.1;Parent=gene-O5C65_002222;Dbxref=NCBI_GP:HJH9172336.1;Name=HJH9172336.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460305.1;locus_tag=O5C65_002222;product=integration host factor subunit alpha;protein_id=HJH9172336.1;transl_table=11 DALFDA020000013.1 tpg gene 79703 80683 . + . ID=gene-O5C65_002223;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=O5C65_002223 DALFDA020000013.1 Protein Homology CDS 79703 80683 . + 0 ID=cds-HJH9172337.1;Parent=gene-O5C65_002223;Dbxref=NCBI_GP:HJH9172337.1;Name=HJH9172337.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460306.1;locus_tag=O5C65_002223;product=vitamin B12 ABC transporter permease BtuC;protein_id=HJH9172337.1;transl_table=11 DALFDA020000013.1 tpg gene 80775 81326 . + . ID=gene-O5C65_002224;Name=O5C65_002224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002224 DALFDA020000013.1 Protein Homology CDS 80775 81326 . + 0 ID=cds-HJH9172338.1;Parent=gene-O5C65_002224;Dbxref=NCBI_GP:HJH9172338.1;Name=HJH9172338.1;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460307.1;locus_tag=O5C65_002224;product=glutathione peroxidase;protein_id=HJH9172338.1;transl_table=11 DALFDA020000013.1 tpg gene 81326 82075 . + . ID=gene-O5C65_002225;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=O5C65_002225 DALFDA020000013.1 Protein Homology CDS 81326 82075 . + 0 ID=cds-HJH9172339.1;Parent=gene-O5C65_002225;Dbxref=NCBI_GP:HJH9172339.1;Name=HJH9172339.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460308.1;locus_tag=O5C65_002225;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=HJH9172339.1;transl_table=11 DALFDA020000013.1 tpg gene 82152 82616 . + . ID=gene-O5C65_002226;Name=O5C65_002226;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002226 DALFDA020000013.1 Protein Homology CDS 82152 82616 . + 0 ID=cds-HJH9172340.1;Parent=gene-O5C65_002226;Dbxref=NCBI_GP:HJH9172340.1;Name=HJH9172340.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460309.1;locus_tag=O5C65_002226;product=C40 family peptidase;protein_id=HJH9172340.1;transl_table=11 DALFDA020000013.1 tpg gene 82929 83642 . + . ID=gene-O5C65_002227;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=O5C65_002227 DALFDA020000013.1 Protein Homology CDS 82929 83642 . + 0 ID=cds-HJH9172341.1;Parent=gene-O5C65_002227;Dbxref=NCBI_GP:HJH9172341.1;Name=HJH9172341.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460310.1;locus_tag=O5C65_002227;product=anti-FlhDC factor YdiV;protein_id=HJH9172341.1;transl_table=11 DALFDA020000013.1 tpg gene 83704 85146 . + . ID=gene-O5C65_002228;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=O5C65_002228 DALFDA020000013.1 Protein Homology CDS 83704 85146 . + 0 ID=cds-HJH9172342.1;Parent=gene-O5C65_002228;Dbxref=NCBI_GP:HJH9172342.1;Name=HJH9172342.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460311.1;locus_tag=O5C65_002228;product=protein adenylyltransferase SelO;protein_id=HJH9172342.1;transl_table=11 DALFDA020000013.1 tpg gene 85181 85372 . - . ID=gene-O5C65_002229;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=O5C65_002229 DALFDA020000013.1 Protein Homology CDS 85181 85372 . - 0 ID=cds-HJH9172343.1;Parent=gene-O5C65_002229;Dbxref=NCBI_GP:HJH9172343.1;Name=HJH9172343.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460312.1;locus_tag=O5C65_002229;product=hemin uptake protein HemP;protein_id=HJH9172343.1;transl_table=11 DALFDA020000013.1 tpg gene 85529 86575 . - . ID=gene-O5C65_002230;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=O5C65_002230 DALFDA020000013.1 Protein Homology CDS 85529 86575 . - 0 ID=cds-HJH9172344.1;Parent=gene-O5C65_002230;Dbxref=NCBI_GP:HJH9172344.1;Name=HJH9172344.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460313.1;locus_tag=O5C65_002230;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=HJH9172344.1;transl_table=11 DALFDA020000013.1 tpg gene 86731 87564 . - . ID=gene-O5C65_002231;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=O5C65_002231 DALFDA020000013.1 Protein Homology CDS 86731 87564 . - 0 ID=cds-HJH9172345.1;Parent=gene-O5C65_002231;Dbxref=NCBI_GP:HJH9172345.1;Name=HJH9172345.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460314.1;locus_tag=O5C65_002231;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=HJH9172345.1;transl_table=11 DALFDA020000013.1 tpg gene 87901 90279 . + . ID=gene-O5C65_002232;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=O5C65_002232 DALFDA020000013.1 Protein Homology CDS 87901 90279 . + 0 ID=cds-HJH9172346.1;Parent=gene-O5C65_002232;Dbxref=NCBI_GP:HJH9172346.1;Name=HJH9172346.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460315.1;locus_tag=O5C65_002232;product=phosphoenolpyruvate synthase;protein_id=HJH9172346.1;transl_table=11 DALFDA020000013.1 tpg gene 90321 91961 . - . ID=gene-O5C65_002233;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=O5C65_002233 DALFDA020000013.1 Protein Homology CDS 90321 91961 . - 0 ID=cds-HJH9172347.1;Parent=gene-O5C65_002233;Dbxref=NCBI_GP:HJH9172347.1;Name=HJH9172347.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460316.1;locus_tag=O5C65_002233;product=medium-chain fatty-acid--CoA ligase;protein_id=HJH9172347.1;transl_table=11 DALFDA020000013.1 tpg gene 92051 92344 . - . ID=gene-O5C65_002234;Name=O5C65_002234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002234 DALFDA020000013.1 Protein Homology CDS 92051 92344 . - 0 ID=cds-HJH9172348.1;Parent=gene-O5C65_002234;Dbxref=NCBI_GP:HJH9172348.1;Name=HJH9172348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460317.1;locus_tag=O5C65_002234;product=ferredoxin family protein;protein_id=HJH9172348.1;transl_table=11 DALFDA020000013.1 tpg gene 92341 93627 . - . ID=gene-O5C65_002235;Name=O5C65_002235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002235 DALFDA020000013.1 Protein Homology CDS 92341 93627 . - 0 ID=cds-HJH9172349.1;Parent=gene-O5C65_002235;Dbxref=NCBI_GP:HJH9172349.1;Name=HJH9172349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460318.1;locus_tag=O5C65_002235;product=FAD-dependent oxidoreductase;protein_id=HJH9172349.1;transl_table=11 DALFDA020000013.1 tpg gene 93684 94619 . - . ID=gene-O5C65_002236;Name=O5C65_002236;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002236 DALFDA020000013.1 Protein Homology CDS 93684 94619 . - 0 ID=cds-HJH9172350.1;Parent=gene-O5C65_002236;Dbxref=NCBI_GP:HJH9172350.1;Name=HJH9172350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460319.1;locus_tag=O5C65_002236;product=electron transfer flavoprotein subunit alpha;protein_id=HJH9172350.1;transl_table=11 DALFDA020000013.1 tpg gene 94641 95405 . - . ID=gene-O5C65_002237;Name=O5C65_002237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002237 DALFDA020000013.1 Protein Homology CDS 94641 95405 . - 0 ID=cds-HJH9172351.1;Parent=gene-O5C65_002237;Dbxref=NCBI_GP:HJH9172351.1;Name=HJH9172351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460320.1;locus_tag=O5C65_002237;product=electron transfer flavoprotein;protein_id=HJH9172351.1;transl_table=11 DALFDA020000013.1 tpg gene 95868 96758 . + . ID=gene-O5C65_002238;Name=O5C65_002238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002238 DALFDA020000013.1 Protein Homology CDS 95868 96758 . + 0 ID=cds-HJH9172352.1;Parent=gene-O5C65_002238;Dbxref=NCBI_GP:HJH9172352.1;Name=HJH9172352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460321.1;locus_tag=O5C65_002238;product=AraC family transcriptional regulator;protein_id=HJH9172352.1;transl_table=11 DALFDA020000013.1 tpg gene 96834 97985 . - . ID=gene-O5C65_002239;Name=O5C65_002239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002239 DALFDA020000013.1 Protein Homology CDS 96834 97985 . - 0 ID=cds-HJH9172353.1;Parent=gene-O5C65_002239;Dbxref=NCBI_GP:HJH9172353.1;Name=HJH9172353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460322.1;locus_tag=O5C65_002239;product=acyl-CoA dehydrogenase;protein_id=HJH9172353.1;transl_table=11 DALFDA020000013.1 tpg gene 97999 99594 . - . ID=gene-O5C65_002240;Name=O5C65_002240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002240 DALFDA020000013.1 Protein Homology CDS 97999 99594 . - 0 ID=cds-HJH9172354.1;Parent=gene-O5C65_002240;Dbxref=NCBI_GP:HJH9172354.1;Name=HJH9172354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=O5C65_002240;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=HJH9172354.1;transl_table=11 DALFDA020000013.1 tpg gene 99748 100506 . - . ID=gene-O5C65_002241;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=O5C65_002241 DALFDA020000013.1 Protein Homology CDS 99748 100506 . - 0 ID=cds-HJH9172355.1;Parent=gene-O5C65_002241;Dbxref=NCBI_GP:HJH9172355.1;Name=HJH9172355.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460324.1;locus_tag=O5C65_002241;product=type I 3-dehydroquinate dehydratase;protein_id=HJH9172355.1;transl_table=11 DALFDA020000013.1 tpg gene 100551 101417 . - . ID=gene-O5C65_002242;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=O5C65_002242 DALFDA020000013.1 Protein Homology CDS 100551 101417 . - 0 ID=cds-HJH9172356.1;Parent=gene-O5C65_002242;Dbxref=NCBI_GP:HJH9172356.1;Name=HJH9172356.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460325.1;locus_tag=O5C65_002242;product=quinate/shikimate dehydrogenase;protein_id=HJH9172356.1;transl_table=11 DALFDA020000013.1 tpg gene 101484 102719 . - . ID=gene-O5C65_002243;Name=O5C65_002243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002243 DALFDA020000013.1 Protein Homology CDS 101484 102719 . - 0 ID=cds-HJH9172357.1;Parent=gene-O5C65_002243;Dbxref=NCBI_GP:HJH9172357.1;Name=HJH9172357.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460326.1;locus_tag=O5C65_002243;product=MFS transporter;protein_id=HJH9172357.1;transl_table=11 DALFDA020000013.1 tpg gene 103083 104294 . - . ID=gene-O5C65_002244;Name=O5C65_002244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002244 DALFDA020000013.1 Protein Homology CDS 103083 104294 . - 0 ID=cds-HJH9172358.1;Parent=gene-O5C65_002244;Dbxref=NCBI_GP:HJH9172358.1;Name=HJH9172358.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460327.1;locus_tag=O5C65_002244;product=MFS transporter;protein_id=HJH9172358.1;transl_table=11 DALFDA020000013.1 tpg gene 104435 104794 . - . ID=gene-O5C65_002245;Name=O5C65_002245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002245 DALFDA020000013.1 Protein Homology CDS 104435 104794 . - 0 ID=cds-HJH9172359.1;Parent=gene-O5C65_002245;Dbxref=NCBI_GP:HJH9172359.1;Name=HJH9172359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460328.1;locus_tag=O5C65_002245;product=YdiL family protein;protein_id=HJH9172359.1;transl_table=11 DALFDA020000013.1 tpg gene 104962 105069 . - . ID=gene-O5C65_002246;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=O5C65_002246 DALFDA020000013.1 cmsearch antisense_RNA 104962 105069 . - . ID=rna-O5C65_002246;Parent=gene-O5C65_002246;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_002246;product=antisense sRNA RprA DALFDA020000013.1 cmsearch exon 104962 105069 . - . ID=exon-O5C65_002246-1;Parent=rna-O5C65_002246;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_002246;product=antisense sRNA RprA DALFDA020000013.1 tpg gene 105252 106370 . - . ID=gene-O5C65_002247;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=O5C65_002247 DALFDA020000013.1 Protein Homology CDS 105252 106370 . - 0 ID=cds-HJH9172360.1;Parent=gene-O5C65_002247;Dbxref=NCBI_GP:HJH9172360.1;Name=HJH9172360.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460329.1;locus_tag=O5C65_002247;product=AI-2E family transporter YdiK;protein_id=HJH9172360.1;transl_table=11 DALFDA020000013.1 tpg gene 106635 109691 . + . ID=gene-O5C65_002248;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=O5C65_002248 DALFDA020000013.1 Protein Homology CDS 106635 109691 . + 0 ID=cds-HJH9172361.1;Parent=gene-O5C65_002248;Dbxref=NCBI_GP:HJH9172361.1;Name=HJH9172361.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460330.1;locus_tag=O5C65_002248;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=HJH9172361.1;transl_table=11 DALFDA020000013.1 tpg gene 109688 110098 . + . ID=gene-O5C65_002249;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=O5C65_002249 DALFDA020000013.1 Protein Homology CDS 109688 110098 . + 0 ID=cds-HJH9172362.1;Parent=gene-O5C65_002249;Dbxref=NCBI_GP:HJH9172362.1;Name=HJH9172362.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460331.1;locus_tag=O5C65_002249;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=HJH9172362.1;transl_table=11 DALFDA020000013.1 tpg gene 110197 110385 . + . ID=gene-O5C65_002250;Name=O5C65_002250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002250 DALFDA020000013.1 Protein Homology CDS 110197 110385 . + 0 ID=cds-HJH9172363.1;Parent=gene-O5C65_002250;Dbxref=NCBI_GP:HJH9172363.1;Name=HJH9172363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=O5C65_002250;product=YdiH family protein;protein_id=HJH9172363.1;transl_table=11 DALFDA020000013.1 tpg gene 110673 112019 . - . ID=gene-O5C65_002251;Name=O5C65_002251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002251 DALFDA020000013.1 Protein Homology CDS 110673 112019 . - 0 ID=cds-HJH9172364.1;Parent=gene-O5C65_002251;Dbxref=NCBI_GP:HJH9172364.1;Name=HJH9172364.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460333.1;locus_tag=O5C65_002251;product=cation:dicarboxylate symporter family transporter;protein_id=HJH9172364.1;transl_table=11 DALFDA020000013.1 tpg gene 112446 112814 . + . ID=gene-O5C65_002252;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=O5C65_002252 DALFDA020000013.1 Protein Homology CDS 112446 112814 . + 0 ID=cds-HJH9172365.1;Parent=gene-O5C65_002252;Dbxref=NCBI_GP:HJH9172365.1;Name=HJH9172365.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460334.1;locus_tag=O5C65_002252;product=Fe-S cluster assembly scaffold SufA;protein_id=HJH9172365.1;transl_table=11 DALFDA020000013.1 tpg gene 112823 114310 . + . ID=gene-O5C65_002253;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=O5C65_002253 DALFDA020000013.1 Protein Homology CDS 112823 114310 . + 0 ID=cds-HJH9172366.1;Parent=gene-O5C65_002253;Dbxref=NCBI_GP:HJH9172366.1;Name=HJH9172366.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=O5C65_002253;product=Fe-S cluster assembly protein SufB;protein_id=HJH9172366.1;transl_table=11 DALFDA020000013.1 tpg gene 114327 115073 . + . ID=gene-O5C65_002254;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=O5C65_002254 DALFDA020000013.1 Protein Homology CDS 114327 115073 . + 0 ID=cds-HJH9172367.1;Parent=gene-O5C65_002254;Dbxref=NCBI_GP:HJH9172367.1;Name=HJH9172367.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=O5C65_002254;product=Fe-S cluster assembly ATPase SufC;protein_id=HJH9172367.1;transl_table=11 DALFDA020000013.1 tpg gene 115048 116319 . + . ID=gene-O5C65_002255;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=O5C65_002255 DALFDA020000013.1 Protein Homology CDS 115048 116319 . + 0 ID=cds-HJH9172368.1;Parent=gene-O5C65_002255;Dbxref=NCBI_GP:HJH9172368.1;Name=HJH9172368.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460337.1;locus_tag=O5C65_002255;product=Fe-S cluster assembly protein SufD;protein_id=HJH9172368.1;transl_table=11 DALFDA020000013.1 tpg gene 116316 117536 . + . ID=gene-O5C65_002256;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=O5C65_002256 DALFDA020000013.1 Protein Homology CDS 116316 117536 . + 0 ID=cds-HJH9172369.1;Parent=gene-O5C65_002256;Dbxref=NCBI_GP:HJH9172369.1;Name=HJH9172369.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460338.1;locus_tag=O5C65_002256;product=cysteine desulfurase SufS;protein_id=HJH9172369.1;transl_table=11 DALFDA020000013.1 tpg gene 117549 117965 . + . ID=gene-O5C65_002257;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=O5C65_002257 DALFDA020000013.1 Protein Homology CDS 117549 117965 . + 0 ID=cds-HJH9172370.1;Parent=gene-O5C65_002257;Dbxref=NCBI_GP:HJH9172370.1;Name=HJH9172370.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460339.1;locus_tag=O5C65_002257;product=cysteine desulfuration protein SufE;protein_id=HJH9172370.1;transl_table=11 DALFDA020000013.1 tpg gene 118120 119121 . + . ID=gene-O5C65_002258;Name=ldtE;gbkey=Gene;gene=ldtE;gene_biotype=protein_coding;locus_tag=O5C65_002258 DALFDA020000013.1 Protein Homology CDS 118120 119121 . + 0 ID=cds-HJH9172371.1;Parent=gene-O5C65_002258;Dbxref=NCBI_GP:HJH9172371.1;Name=HJH9172371.1;Ontology_term=GO:0009252,GO:0018104,GO:0016757,GO:0071972;gbkey=CDS;gene=ldtE;go_function=glycosyltransferase activity|0016757||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460340.1;locus_tag=O5C65_002258;product=L%2CD-transpeptidase LdtE;protein_id=HJH9172371.1;transl_table=11 DALFDA020000013.1 tpg gene 119188 119427 . - . ID=gene-O5C65_002259;Name=O5C65_002259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002259 DALFDA020000013.1 Protein Homology CDS 119188 119427 . - 0 ID=cds-HJH9172372.1;Parent=gene-O5C65_002259;Dbxref=NCBI_GP:HJH9172372.1;Name=HJH9172372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460341.1;locus_tag=O5C65_002259;product=major outer membrane lipoprotein;protein_id=HJH9172372.1;transl_table=11 DALFDA020000013.1 tpg gene 119510 119746 . - . ID=gene-O5C65_002260;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=O5C65_002260 DALFDA020000013.1 Protein Homology CDS 119510 119746 . - 0 ID=cds-HJH9172373.1;Parent=gene-O5C65_002260;Dbxref=NCBI_GP:HJH9172373.1;Name=HJH9172373.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460342.1;locus_tag=O5C65_002260;product=murein lipoprotein Lpp;protein_id=HJH9172373.1;transl_table=11 DALFDA020000013.1 tpg gene 120057 121469 . - . ID=gene-O5C65_002261;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=O5C65_002261 DALFDA020000013.1 Protein Homology CDS 120057 121469 . - 0 ID=cds-HJH9172374.1;Parent=gene-O5C65_002261;Dbxref=NCBI_GP:HJH9172374.1;Name=HJH9172374.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=O5C65_002261;product=pyruvate kinase PykF;protein_id=HJH9172374.1;transl_table=11 DALFDA020000013.1 tpg gene 121477 121707 . - . ID=gene-O5C65_002262;Name=O5C65_002262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002262 DALFDA020000013.1 Protein Homology CDS 121477 121707 . - 0 ID=cds-HJH9172375.1;Parent=gene-O5C65_002262;Dbxref=NCBI_GP:HJH9172375.1;Name=HJH9172375.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049534.1;locus_tag=O5C65_002262;product=hypothetical protein;protein_id=HJH9172375.1;transl_table=11 DALFDA020000013.1 tpg gene 121871 123214 . - . ID=gene-O5C65_002263;Name=O5C65_002263;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002263 DALFDA020000013.1 Protein Homology CDS 121871 123214 . - 0 ID=cds-HJH9172376.1;Parent=gene-O5C65_002263;Dbxref=NCBI_GP:HJH9172376.1;Name=HJH9172376.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460344.1;locus_tag=O5C65_002263;product=APC family permease;protein_id=HJH9172376.1;transl_table=11 DALFDA020000013.1 tpg gene 123236 124129 . - . ID=gene-O5C65_002264;Name=O5C65_002264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002264 DALFDA020000013.1 Protein Homology CDS 123236 124129 . - 0 ID=cds-HJH9172377.1;Parent=gene-O5C65_002264;Dbxref=NCBI_GP:HJH9172377.1;Name=HJH9172377.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460345.1;locus_tag=O5C65_002264;product=proline iminopeptidase-family hydrolase;protein_id=HJH9172377.1;transl_table=11 DALFDA020000013.1 tpg gene 124187 124924 . - . ID=gene-O5C65_002265;Name=O5C65_002265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002265 DALFDA020000013.1 Protein Homology CDS 124187 124924 . - 0 ID=cds-HJH9172378.1;Parent=gene-O5C65_002265;Dbxref=NCBI_GP:HJH9172378.1;Name=HJH9172378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460346.1;locus_tag=O5C65_002265;product=glutamine amidotransferase;protein_id=HJH9172378.1;transl_table=11 DALFDA020000013.1 tpg gene 124936 126162 . - . ID=gene-O5C65_002266;Name=O5C65_002266;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002266 DALFDA020000013.1 Protein Homology CDS 124936 126162 . - 0 ID=cds-HJH9172379.1;Parent=gene-O5C65_002266;Dbxref=NCBI_GP:HJH9172379.1;Name=HJH9172379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460347.1;locus_tag=O5C65_002266;product=PfkB family carbohydrate kinase;protein_id=HJH9172379.1;transl_table=11 DALFDA020000013.1 tpg gene 126485 129547 . - . ID=gene-O5C65_002267;Name=ttrA;gbkey=Gene;gene=ttrA;gene_biotype=protein_coding;locus_tag=O5C65_002267 DALFDA020000013.1 Protein Homology CDS 126485 129547 . - 0 ID=cds-HJH9172380.1;Parent=gene-O5C65_002267;Dbxref=NCBI_GP:HJH9172380.1;Name=HJH9172380.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;gene=ttrA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460348.1;locus_tag=O5C65_002267;product=tetrathionate reductase subunit TtrA;protein_id=HJH9172380.1;transl_table=11 DALFDA020000013.1 tpg gene 129540 130562 . - . ID=gene-O5C65_002268;Name=ttrC;gbkey=Gene;gene=ttrC;gene_biotype=protein_coding;locus_tag=O5C65_002268 DALFDA020000013.1 Protein Homology CDS 129540 130562 . - 0 ID=cds-HJH9172381.1;Parent=gene-O5C65_002268;Dbxref=NCBI_GP:HJH9172381.1;Name=HJH9172381.1;gbkey=CDS;gene=ttrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460349.1;locus_tag=O5C65_002268;product=tetrathionate reductase subunit TtrC;protein_id=HJH9172381.1;transl_table=11 DALFDA020000013.1 tpg gene 130563 131297 . - . ID=gene-O5C65_002269;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=protein_coding;locus_tag=O5C65_002269 DALFDA020000013.1 Protein Homology CDS 130563 131297 . - 0 ID=cds-HJH9172382.1;Parent=gene-O5C65_002269;Dbxref=NCBI_GP:HJH9172382.1;Name=HJH9172382.1;gbkey=CDS;gene=ttrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518945.1;locus_tag=O5C65_002269;product=tetrathionate reductase subunit TtrB;protein_id=HJH9172382.1;transl_table=11 DALFDA020000013.1 tpg gene 131479 133257 . + . ID=gene-O5C65_002270;Name=ttrS;gbkey=Gene;gene=ttrS;gene_biotype=protein_coding;locus_tag=O5C65_002270 DALFDA020000013.1 Protein Homology CDS 131479 133257 . + 0 ID=cds-HJH9172383.1;Parent=gene-O5C65_002270;Dbxref=NCBI_GP:HJH9172383.1;Name=HJH9172383.1;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460351.1;locus_tag=O5C65_002270;product=tetrathionate respiration histidine kinase TtrS;protein_id=HJH9172383.1;transl_table=11 DALFDA020000013.1 tpg gene 133232 133852 . + . ID=gene-O5C65_002271;Name=ttrR;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=O5C65_002271 DALFDA020000013.1 Protein Homology CDS 133232 133852 . + 0 ID=cds-HJH9172384.1;Parent=gene-O5C65_002271;Dbxref=NCBI_GP:HJH9172384.1;Name=HJH9172384.1;gbkey=CDS;gene=ttrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460352.3;locus_tag=O5C65_002271;product=tetrathionate respiration response regulator TtrR;protein_id=HJH9172384.1;transl_table=11 DALFDA020000013.1 tpg gene 133950 134162 . + . ID=gene-O5C65_002272;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=O5C65_002272 DALFDA020000013.1 Protein Homology CDS 133950 134162 . + 0 ID=cds-HJH9172385.1;Parent=gene-O5C65_002272;Dbxref=NCBI_GP:HJH9172385.1;Name=HJH9172385.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460353.1;locus_tag=O5C65_002272;product=fumarate hydratase FumD;protein_id=HJH9172385.1;transl_table=11 DALFDA020000013.1 tpg gene 134258 135217 . - . ID=gene-O5C65_002273;Name=mlrB;gbkey=Gene;gene=mlrB;gene_biotype=protein_coding;locus_tag=O5C65_002273 DALFDA020000013.1 Protein Homology CDS 134258 135217 . - 0 ID=cds-HJH9172386.1;Parent=gene-O5C65_002273;Dbxref=NCBI_GP:HJH9172386.1;Name=HJH9172386.1;gbkey=CDS;gene=mlrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460354.1;locus_tag=O5C65_002273;product=transcriptional regulator MlrB;protein_id=HJH9172386.1;transl_table=11 DALFDA020000013.1 tpg gene 135389 136117 . - . ID=gene-O5C65_002274;Name=O5C65_002274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002274 DALFDA020000013.1 Protein Homology CDS 135389 136117 . - 0 ID=cds-HJH9172387.1;Parent=gene-O5C65_002274;Dbxref=NCBI_GP:HJH9172387.1;Name=HJH9172387.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460355.1;locus_tag=O5C65_002274;product=MerR family transcriptional regulator;protein_id=HJH9172387.1;transl_table=11 DALFDA020000013.1 tpg gene 136296 136934 . - . ID=gene-O5C65_002275;Name=O5C65_002275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002275 DALFDA020000013.1 Protein Homology CDS 136296 136934 . - 0 ID=cds-HJH9172388.1;Parent=gene-O5C65_002275;Dbxref=NCBI_GP:HJH9172388.1;Name=HJH9172388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460356.1;locus_tag=O5C65_002275;product=two component system response regulator;protein_id=HJH9172388.1;transl_table=11 DALFDA020000013.1 tpg gene 136965 139727 . - . ID=gene-O5C65_002276;Name=O5C65_002276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002276 DALFDA020000013.1 Protein Homology CDS 136965 139727 . - 0 ID=cds-HJH9172389.1;Parent=gene-O5C65_002276;Dbxref=NCBI_GP:HJH9172389.1;Name=HJH9172389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460357.1;locus_tag=O5C65_002276;product=two component system sensor kinase;protein_id=HJH9172389.1;transl_table=11 DALFDA020000013.1 tpg gene 140128 140529 . + . ID=gene-O5C65_002277;Name=spiC;gbkey=Gene;gene=spiC;gene_biotype=protein_coding;locus_tag=O5C65_002277 DALFDA020000013.1 Protein Homology CDS 140128 140529 . + 0 ID=cds-HJH9172390.1;Parent=gene-O5C65_002277;Dbxref=NCBI_GP:HJH9172390.1;Name=HJH9172390.1;gbkey=CDS;gene=spiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460358.1;locus_tag=O5C65_002277;product=SPI-2 type III secretion system protein SpiC;protein_id=HJH9172390.1;transl_table=11 DALFDA020000013.1 tpg gene 140531 142024 . + . ID=gene-O5C65_002278;Name=spiA;gbkey=Gene;gene=spiA;gene_biotype=protein_coding;locus_tag=O5C65_002278 DALFDA020000013.1 Protein Homology CDS 140531 142024 . + 0 ID=cds-HJH9172391.1;Parent=gene-O5C65_002278;Dbxref=NCBI_GP:HJH9172391.1;Name=HJH9172391.1;gbkey=CDS;gene=spiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460359.1;locus_tag=O5C65_002278;product=SPI-2 type III secretion system protein SpiA;protein_id=HJH9172391.1;transl_table=11 DALFDA020000013.1 tpg gene 142005 143216 . + . ID=gene-O5C65_002279;Name=ssaD;gbkey=Gene;gene=ssaD;gene_biotype=protein_coding;locus_tag=O5C65_002279 DALFDA020000013.1 Protein Homology CDS 142005 143216 . + 0 ID=cds-HJH9172392.1;Parent=gene-O5C65_002279;Dbxref=NCBI_GP:HJH9172392.1;Name=HJH9172392.1;gbkey=CDS;gene=ssaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460360.1;locus_tag=O5C65_002279;product=SctD family type III secretion system inner membrane ring subunit SsaD;protein_id=HJH9172392.1;transl_table=11 DALFDA020000013.1 tpg gene 143224 143466 . + . ID=gene-O5C65_002280;Name=ssaE;gbkey=Gene;gene=ssaE;gene_biotype=protein_coding;locus_tag=O5C65_002280 DALFDA020000013.1 Protein Homology CDS 143224 143466 . + 0 ID=cds-HJH9172393.1;Parent=gene-O5C65_002280;Dbxref=NCBI_GP:HJH9172393.1;Name=HJH9172393.1;gbkey=CDS;gene=ssaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460361.1;locus_tag=O5C65_002280;product=YscE family type III secretion system co-chaperone SsaE;protein_id=HJH9172393.1;transl_table=11 DALFDA020000013.1 tpg gene 143729 144055 . + . ID=gene-O5C65_002281;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=O5C65_002281 DALFDA020000013.1 Protein Homology CDS 143729 144055 . + 0 ID=cds-HJH9172394.1;Parent=gene-O5C65_002281;Dbxref=NCBI_GP:HJH9172394.1;Name=HJH9172394.1;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460362.1;locus_tag=O5C65_002281;product=SPI-2 type III secretion system chaperone SseA;protein_id=HJH9172394.1;transl_table=11 DALFDA020000013.1 tpg gene 144062 144652 . + . ID=gene-O5C65_002282;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=O5C65_002282 DALFDA020000013.1 Protein Homology CDS 144062 144652 . + 0 ID=cds-HJH9172395.1;Parent=gene-O5C65_002282;Dbxref=NCBI_GP:HJH9172395.1;Name=HJH9172395.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460363.1;locus_tag=O5C65_002282;product=SPI-2 type III secretion system translocon protein SseB;protein_id=HJH9172395.1;transl_table=11 DALFDA020000013.1 tpg gene 144649 145122 . + . ID=gene-O5C65_002283;Name=sscA;gbkey=Gene;gene=sscA;gene_biotype=protein_coding;locus_tag=O5C65_002283 DALFDA020000013.1 Protein Homology CDS 144649 145122 . + 0 ID=cds-HJH9172396.1;Parent=gene-O5C65_002283;Dbxref=NCBI_GP:HJH9172396.1;Name=HJH9172396.1;gbkey=CDS;gene=sscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460364.1;locus_tag=O5C65_002283;product=SycD/LcrH family type III secretion system chaperone SscA;protein_id=HJH9172396.1;transl_table=11 DALFDA020000013.1 tpg gene 145125 146579 . + . ID=gene-O5C65_002284;Name=O5C65_002284;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002284 DALFDA020000013.1 Protein Homology CDS 145125 146579 . + 0 ID=cds-HJH9172397.1;Parent=gene-O5C65_002284;Dbxref=NCBI_GP:HJH9172397.1;Name=HJH9172397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460365.1;locus_tag=O5C65_002284;product=type III secretion system translocon protein;protein_id=HJH9172397.1;transl_table=11 DALFDA020000013.1 tpg gene 146595 147182 . + . ID=gene-O5C65_002285;Name=sseD;gbkey=Gene;gene=sseD;gene_biotype=protein_coding;locus_tag=O5C65_002285 DALFDA020000013.1 Protein Homology CDS 146595 147182 . + 0 ID=cds-HJH9172398.1;Parent=gene-O5C65_002285;Dbxref=NCBI_GP:HJH9172398.1;Name=HJH9172398.1;gbkey=CDS;gene=sseD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460366.1;locus_tag=O5C65_002285;product=SPI-2 type III secretion system translocon protein SseD;protein_id=HJH9172398.1;transl_table=11 DALFDA020000013.1 tpg gene 147185 147601 . + . ID=gene-O5C65_002286;Name=sseE;gbkey=Gene;gene=sseE;gene_biotype=protein_coding;locus_tag=O5C65_002286 DALFDA020000013.1 Protein Homology CDS 147185 147601 . + 0 ID=cds-HJH9172399.1;Parent=gene-O5C65_002286;Dbxref=NCBI_GP:HJH9172399.1;Name=HJH9172399.1;gbkey=CDS;gene=sseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460367.1;locus_tag=O5C65_002286;product=LcrR family type III secretion system chaperone SseE;protein_id=HJH9172399.1;transl_table=11 DALFDA020000013.1 tpg gene 147653 148087 . + . ID=gene-O5C65_002287;Name=sscB;gbkey=Gene;gene=sscB;gene_biotype=protein_coding;locus_tag=O5C65_002287 DALFDA020000013.1 Protein Homology CDS 147653 148087 . + 0 ID=cds-HJH9172400.1;Parent=gene-O5C65_002287;Dbxref=NCBI_GP:HJH9172400.1;Name=HJH9172400.1;gbkey=CDS;gene=sscB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460368.1;locus_tag=O5C65_002287;product=SycD/LcrH family type III secretion system chaperone SscB;protein_id=HJH9172400.1;transl_table=11 DALFDA020000013.1 tpg gene 148103 148180 . + . ID=gene-O5C65_002288;Name=O5C65_002288;end_range=148180,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002288;partial=true DALFDA020000013.1 Protein Homology CDS 148103 148180 . + 0 ID=cds-HJH9172401.1;Parent=gene-O5C65_002288;Dbxref=NCBI_GP:HJH9172401.1;Name=HJH9172401.1;Note=with SseG is involved in the aggregation of the host endosomes;end_range=148180,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460369.1;locus_tag=O5C65_002288;partial=true;product=type III secretion systems effector SseF;protein_id=HJH9172401.1;transl_table=11 ##sequence-region DALFDA020000014.1 1 141810 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000014.1 tpg region 1 141810 . + . ID=DALFDA020000014.1:1..141810;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000014.1 tpg gene 85 600 . - . ID=gene-O5C65_002289;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=O5C65_002289 DALFDA020000014.1 Protein Homology CDS 85 600 . - 0 ID=cds-HJH9172402.1;Parent=gene-O5C65_002289;Dbxref=NCBI_GP:HJH9172402.1;Name=HJH9172402.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462873.1;locus_tag=O5C65_002289;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=HJH9172402.1;transl_table=11 DALFDA020000014.1 tpg gene 597 1181 . - . ID=gene-O5C65_002290;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=O5C65_002290 DALFDA020000014.1 Protein Homology CDS 597 1181 . - 0 ID=cds-HJH9172403.1;Parent=gene-O5C65_002290;Dbxref=NCBI_GP:HJH9172403.1;Name=HJH9172403.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462874.1;locus_tag=O5C65_002290;product=molybdenum cofactor guanylyltransferase MobA;protein_id=HJH9172403.1;transl_table=11 DALFDA020000014.1 tpg gene 1251 1520 . + . ID=gene-O5C65_002291;Name=O5C65_002291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002291 DALFDA020000014.1 Protein Homology CDS 1251 1520 . + 0 ID=cds-HJH9172404.1;Parent=gene-O5C65_002291;Dbxref=NCBI_GP:HJH9172404.1;Name=HJH9172404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=O5C65_002291;product=YihD family protein;protein_id=HJH9172404.1;transl_table=11 DALFDA020000014.1 tpg gene 1597 2583 . + . ID=gene-O5C65_002292;Name=O5C65_002292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002292 DALFDA020000014.1 Protein Homology CDS 1597 2583 . + 0 ID=cds-HJH9172405.1;Parent=gene-O5C65_002292;Dbxref=NCBI_GP:HJH9172405.1;Name=HJH9172405.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462876.1;locus_tag=O5C65_002292;product=serine/threonine protein kinase;protein_id=HJH9172405.1;transl_table=11 DALFDA020000014.1 tpg gene 2600 3223 . + . ID=gene-O5C65_002293;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=O5C65_002293 DALFDA020000014.1 Protein Homology CDS 2600 3223 . + 0 ID=cds-HJH9172406.1;Parent=gene-O5C65_002293;Dbxref=NCBI_GP:HJH9172406.1;Name=HJH9172406.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462877.1;locus_tag=O5C65_002293;product=thiol:disulfide interchange protein DsbA;protein_id=HJH9172406.1;transl_table=11 DALFDA020000014.1 tpg gene 3236 4144 . - . ID=gene-O5C65_002294;Name=O5C65_002294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002294 DALFDA020000014.1 Protein Homology CDS 3236 4144 . - 0 ID=cds-HJH9172407.1;Parent=gene-O5C65_002294;Dbxref=NCBI_GP:HJH9172407.1;Name=HJH9172407.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462878.1;locus_tag=O5C65_002294;product=acyltransferase;protein_id=HJH9172407.1;transl_table=11 DALFDA020000014.1 tpg gene 4532 7318 . + . ID=gene-O5C65_002295;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=O5C65_002295 DALFDA020000014.1 Protein Homology CDS 4532 7318 . + 0 ID=cds-HJH9172408.1;Parent=gene-O5C65_002295;Dbxref=NCBI_GP:HJH9172408.1;Name=HJH9172408.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462879.1;locus_tag=O5C65_002295;product=DNA polymerase I;protein_id=HJH9172408.1;transl_table=11 DALFDA020000014.1 tpg gene 7653 8285 . - . ID=gene-O5C65_002296;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=O5C65_002296 DALFDA020000014.1 Protein Homology CDS 7653 8285 . - 0 ID=cds-HJH9172409.1;Parent=gene-O5C65_002296;Dbxref=NCBI_GP:HJH9172409.1;Name=HJH9172409.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462881.1;locus_tag=O5C65_002296;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=HJH9172409.1;transl_table=11 DALFDA020000014.1 tpg gene 8525 8749 . + . ID=gene-O5C65_002297;Name=O5C65_002297;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002297 DALFDA020000014.1 Protein Homology CDS 8525 8749 . + 0 ID=cds-HJH9172410.1;Parent=gene-O5C65_002297;Dbxref=NCBI_GP:HJH9172410.1;Name=HJH9172410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462882.1;locus_tag=O5C65_002297;product=hypothetical protein;protein_id=HJH9172410.1;transl_table=11 DALFDA020000014.1 tpg gene 8868 9383 . + . ID=gene-O5C65_002298;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=O5C65_002298 DALFDA020000014.1 Protein Homology CDS 8868 9383 . + 0 ID=cds-HJH9172411.1;Parent=gene-O5C65_002298;Dbxref=NCBI_GP:HJH9172411.1;Name=HJH9172411.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462883.1;locus_tag=O5C65_002298;product=Der GTPase-activating protein YihI;protein_id=HJH9172411.1;transl_table=11 DALFDA020000014.1 tpg gene 9572 10945 . + . ID=gene-O5C65_002299;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=O5C65_002299 DALFDA020000014.1 Protein Homology CDS 9572 10945 . + 0 ID=cds-HJH9172412.1;Parent=gene-O5C65_002299;Dbxref=NCBI_GP:HJH9172412.1;Name=HJH9172412.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462884.1;locus_tag=O5C65_002299;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=HJH9172412.1;transl_table=11 DALFDA020000014.1 tpg gene 11035 11145 . - . ID=gene-O5C65_002300;Name=O5C65_002300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002300 DALFDA020000014.1 Protein Homology CDS 11035 11145 . - 0 ID=cds-HJH9172413.1;Parent=gene-O5C65_002300;Dbxref=NCBI_GP:HJH9172413.1;Name=HJH9172413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=O5C65_002300;product=YshB family small membrane protein;protein_id=HJH9172413.1;transl_table=11 DALFDA020000014.1 tpg gene 11258 12667 . - . ID=gene-O5C65_002301;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=O5C65_002301 DALFDA020000014.1 Protein Homology CDS 11258 12667 . - 0 ID=cds-HJH9172414.1;Parent=gene-O5C65_002301;Dbxref=NCBI_GP:HJH9172414.1;Name=HJH9172414.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=O5C65_002301;product=nitrogen regulation protein NR(I);protein_id=HJH9172414.1;transl_table=11 DALFDA020000014.1 tpg gene 12676 13725 . - . ID=gene-O5C65_002302;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=O5C65_002302 DALFDA020000014.1 Protein Homology CDS 12676 13725 . - 0 ID=cds-HJH9172415.1;Parent=gene-O5C65_002302;Dbxref=NCBI_GP:HJH9172415.1;Name=HJH9172415.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462886.1;locus_tag=O5C65_002302;product=nitrogen regulation protein NR(II);protein_id=HJH9172415.1;transl_table=11 DALFDA020000014.1 tpg gene 14000 15409 . - . ID=gene-O5C65_002303;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=O5C65_002303 DALFDA020000014.1 Protein Homology CDS 14000 15409 . - 0 ID=cds-HJH9172416.1;Parent=gene-O5C65_002303;Dbxref=NCBI_GP:HJH9172416.1;Name=HJH9172416.1;Ontology_term=GO:0006542,GO:0008152,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=O5C65_002303;product=glutamate--ammonia ligase;protein_id=HJH9172416.1;transl_table=11 DALFDA020000014.1 tpg gene 15785 17608 . + . ID=gene-O5C65_002304;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=O5C65_002304 DALFDA020000014.1 Protein Homology CDS 15785 17608 . + 0 ID=cds-HJH9172417.1;Parent=gene-O5C65_002304;Dbxref=NCBI_GP:HJH9172417.1;Name=HJH9172417.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462889.1;locus_tag=O5C65_002304;product=ribosome-dependent GTPase TypA;protein_id=HJH9172417.1;transl_table=11 DALFDA020000014.1 tpg gene 17663 18397 . - . ID=gene-O5C65_002305;Name=O5C65_002305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002305 DALFDA020000014.1 Protein Homology CDS 17663 18397 . - 0 ID=cds-HJH9172418.1;Parent=gene-O5C65_002305;Dbxref=NCBI_GP:HJH9172418.1;Name=HJH9172418.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462890.1;locus_tag=O5C65_002305;product=Cof-type HAD-IIB family hydrolase;protein_id=HJH9172418.1;transl_table=11 DALFDA020000014.1 tpg gene 18382 19260 . - . ID=gene-O5C65_002306;Name=O5C65_002306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002306 DALFDA020000014.1 Protein Homology CDS 18382 19260 . - 0 ID=cds-HJH9172419.1;Parent=gene-O5C65_002306;Dbxref=NCBI_GP:HJH9172419.1;Name=HJH9172419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462891.1;locus_tag=O5C65_002306;product=STM4011 family radical SAM protein;protein_id=HJH9172419.1;transl_table=11 DALFDA020000014.1 tpg gene 19257 20498 . - . ID=gene-O5C65_002307;Name=O5C65_002307;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002307 DALFDA020000014.1 Protein Homology CDS 19257 20498 . - 0 ID=cds-HJH9172420.1;Parent=gene-O5C65_002307;Dbxref=NCBI_GP:HJH9172420.1;Name=HJH9172420.1;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462892.1;locus_tag=O5C65_002307;product=STM4012 family radical SAM protein;protein_id=HJH9172420.1;transl_table=11 DALFDA020000014.1 tpg gene 20500 21375 . - . ID=gene-O5C65_002308;Name=O5C65_002308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002308 DALFDA020000014.1 Protein Homology CDS 20500 21375 . - 0 ID=cds-HJH9172421.1;Parent=gene-O5C65_002308;Dbxref=NCBI_GP:HJH9172421.1;Name=HJH9172421.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462893.3;locus_tag=O5C65_002308;product=STM4013/SEN3800 family hydrolase;protein_id=HJH9172421.1;transl_table=11 DALFDA020000014.1 tpg gene 21368 22393 . - . ID=gene-O5C65_002309;Name=O5C65_002309;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002309 DALFDA020000014.1 Protein Homology CDS 21368 22393 . - 0 ID=cds-HJH9172422.1;Parent=gene-O5C65_002309;Dbxref=NCBI_GP:HJH9172422.1;Name=HJH9172422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462894.3;locus_tag=O5C65_002309;product=STM4014 family protein;protein_id=HJH9172422.1;transl_table=11 DALFDA020000014.1 tpg gene 22406 23254 . - . ID=gene-O5C65_002310;Name=O5C65_002310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002310 DALFDA020000014.1 Protein Homology CDS 22406 23254 . - 0 ID=cds-HJH9172423.1;Parent=gene-O5C65_002310;Dbxref=NCBI_GP:HJH9172423.1;Name=HJH9172423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462895.1;locus_tag=O5C65_002310;product=STM4015 family protein;protein_id=HJH9172423.1;transl_table=11 DALFDA020000014.1 tpg gene 23411 24103 . - . ID=gene-O5C65_002311;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=O5C65_002311 DALFDA020000014.1 Protein Homology CDS 23411 24103 . - 0 ID=cds-HJH9172424.1;Parent=gene-O5C65_002311;Dbxref=NCBI_GP:HJH9172424.1;Name=HJH9172424.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462896.1;locus_tag=O5C65_002311;product=porin OmpL;protein_id=HJH9172424.1;transl_table=11 DALFDA020000014.1 tpg gene 24171 25592 . - . ID=gene-O5C65_002312;Name=O5C65_002312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002312 DALFDA020000014.1 Protein Homology CDS 24171 25592 . - 0 ID=cds-HJH9172425.1;Parent=gene-O5C65_002312;Dbxref=NCBI_GP:HJH9172425.1;Name=HJH9172425.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462897.1;locus_tag=O5C65_002312;product=MFS transporter;protein_id=HJH9172425.1;transl_table=11 DALFDA020000014.1 tpg gene 25638 27020 . - . ID=gene-O5C65_002313;Name=O5C65_002313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002313 DALFDA020000014.1 Protein Homology CDS 25638 27020 . - 0 ID=cds-HJH9172426.1;Parent=gene-O5C65_002313;Dbxref=NCBI_GP:HJH9172426.1;Name=HJH9172426.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462898.1;locus_tag=O5C65_002313;product=MFS transporter;protein_id=HJH9172426.1;transl_table=11 DALFDA020000014.1 tpg gene 27066 29102 . - . ID=gene-O5C65_002314;Name=O5C65_002314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002314 DALFDA020000014.1 Protein Homology CDS 27066 29102 . - 0 ID=cds-HJH9172427.1;Parent=gene-O5C65_002314;Dbxref=NCBI_GP:HJH9172427.1;Name=HJH9172427.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462899.1;locus_tag=O5C65_002314;product=alpha-glucosidase;protein_id=HJH9172427.1;transl_table=11 DALFDA020000014.1 tpg gene 29146 30003 . - . ID=gene-O5C65_002315;Name=O5C65_002315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002315 DALFDA020000014.1 Protein Homology CDS 29146 30003 . - 0 ID=cds-HJH9172428.1;Parent=gene-O5C65_002315;Dbxref=NCBI_GP:HJH9172428.1;Name=HJH9172428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462900.3;locus_tag=O5C65_002315;product=aldose-1-epimerase;protein_id=HJH9172428.1;transl_table=11 DALFDA020000014.1 tpg gene 30007 31248 . - . ID=gene-O5C65_002316;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=O5C65_002316 DALFDA020000014.1 Protein Homology CDS 30007 31248 . - 0 ID=cds-HJH9172429.1;Parent=gene-O5C65_002316;Dbxref=NCBI_GP:HJH9172429.1;Name=HJH9172429.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462901.1;locus_tag=O5C65_002316;product=sulfoquinovose isomerase;protein_id=HJH9172429.1;transl_table=11 DALFDA020000014.1 tpg gene 31264 32142 . - . ID=gene-O5C65_002317;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=O5C65_002317 DALFDA020000014.1 Protein Homology CDS 31264 32142 . - 0 ID=cds-HJH9172430.1;Parent=gene-O5C65_002317;Dbxref=NCBI_GP:HJH9172430.1;Name=HJH9172430.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462902.1;locus_tag=O5C65_002317;product=sulfofructosephosphate aldolase;protein_id=HJH9172430.1;transl_table=11 DALFDA020000014.1 tpg gene 32165 33061 . - . ID=gene-O5C65_002318;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=O5C65_002318 DALFDA020000014.1 Protein Homology CDS 32165 33061 . - 0 ID=cds-HJH9172431.1;Parent=gene-O5C65_002318;Dbxref=NCBI_GP:HJH9172431.1;Name=HJH9172431.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462903.1;locus_tag=O5C65_002318;product=sulfolactaldehyde 3-reductase;protein_id=HJH9172431.1;transl_table=11 DALFDA020000014.1 tpg gene 33226 34122 . + . ID=gene-O5C65_002319;Name=O5C65_002319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002319 DALFDA020000014.1 Protein Homology CDS 33226 34122 . + 0 ID=cds-HJH9172432.1;Parent=gene-O5C65_002319;Dbxref=NCBI_GP:HJH9172432.1;Name=HJH9172432.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462904.3;locus_tag=O5C65_002319;product=sugar kinase;protein_id=HJH9172432.1;transl_table=11 DALFDA020000014.1 tpg gene 34156 34959 . + . ID=gene-O5C65_002320;Name=O5C65_002320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002320 DALFDA020000014.1 Protein Homology CDS 34156 34959 . + 0 ID=cds-HJH9172433.1;Parent=gene-O5C65_002320;Dbxref=NCBI_GP:HJH9172433.1;Name=HJH9172433.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462905.1;locus_tag=O5C65_002320;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=HJH9172433.1;transl_table=11 DALFDA020000014.1 tpg gene 35150 35749 . + . ID=gene-O5C65_002321;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=O5C65_002321 DALFDA020000014.1 Protein Homology CDS 35150 35749 . + 0 ID=cds-HJH9172434.1;Parent=gene-O5C65_002321;Dbxref=NCBI_GP:HJH9172434.1;Name=HJH9172434.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462906.1;locus_tag=O5C65_002321;product=glucose-1-phosphatase;protein_id=HJH9172434.1;transl_table=11 DALFDA020000014.1 tpg gene 35743 36615 . + . ID=gene-O5C65_002322;Name=O5C65_002322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002322 DALFDA020000014.1 Protein Homology CDS 35743 36615 . + 0 ID=cds-HJH9172435.1;Parent=gene-O5C65_002322;Dbxref=NCBI_GP:HJH9172435.1;Name=HJH9172435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462907.1;locus_tag=O5C65_002322;product=virulence factor BrkB family protein;protein_id=HJH9172435.1;transl_table=11 DALFDA020000014.1 tpg gene 36612 37049 . + . ID=gene-O5C65_002323;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=O5C65_002323 DALFDA020000014.1 Protein Homology CDS 36612 37049 . + 0 ID=cds-HJH9172436.1;Parent=gene-O5C65_002323;Dbxref=NCBI_GP:HJH9172436.1;Name=HJH9172436.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=O5C65_002323;product=D-aminoacyl-tRNA deacylase;protein_id=HJH9172436.1;transl_table=11 DALFDA020000014.1 tpg gene 37094 38035 . + . ID=gene-O5C65_002324;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=O5C65_002324 DALFDA020000014.1 Protein Homology CDS 37094 38035 . + 0 ID=cds-HJH9172437.1;Parent=gene-O5C65_002324;Dbxref=NCBI_GP:HJH9172437.1;Name=HJH9172437.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=O5C65_002324;product=fatty acid biosynthesis protein FabY;protein_id=HJH9172437.1;transl_table=11 DALFDA020000014.1 tpg gene 38050 38496 . - . ID=gene-O5C65_002325;Name=O5C65_002325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002325 DALFDA020000014.1 Protein Homology CDS 38050 38496 . - 0 ID=cds-HJH9172438.1;Parent=gene-O5C65_002325;Dbxref=NCBI_GP:HJH9172438.1;Name=HJH9172438.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462910.3;locus_tag=O5C65_002325;product=helix-turn-helix domain-containing protein;protein_id=HJH9172438.1;transl_table=11 DALFDA020000014.1 tpg gene 38493 38804 . - . ID=gene-O5C65_002326;Name=O5C65_002326;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002326 DALFDA020000014.1 Protein Homology CDS 38493 38804 . - 0 ID=cds-HJH9172439.1;Parent=gene-O5C65_002326;Dbxref=NCBI_GP:HJH9172439.1;Name=HJH9172439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462911.1;locus_tag=O5C65_002326;product=type II toxin-antitoxin system HigB family toxin;protein_id=HJH9172439.1;transl_table=11 DALFDA020000014.1 tpg gene 38890 39819 . - . ID=gene-O5C65_002327;Name=O5C65_002327;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002327 DALFDA020000014.1 Protein Homology CDS 38890 39819 . - 0 ID=cds-HJH9172440.1;Parent=gene-O5C65_002327;Dbxref=NCBI_GP:HJH9172440.1;Name=HJH9172440.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462912.1;locus_tag=O5C65_002327;product=alpha/beta hydrolase;protein_id=HJH9172440.1;transl_table=11 DALFDA020000014.1 tpg gene 40037 40348 . + . ID=gene-O5C65_002328;Name=O5C65_002328;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002328 DALFDA020000014.1 Protein Homology CDS 40037 40348 . + 0 ID=cds-HJH9172441.1;Parent=gene-O5C65_002328;Dbxref=NCBI_GP:HJH9172441.1;Name=HJH9172441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001159636.1;locus_tag=O5C65_002328;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=HJH9172441.1;transl_table=11 DALFDA020000014.1 tpg gene 40349 40639 . + . ID=gene-O5C65_002329;Name=O5C65_002329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002329 DALFDA020000014.1 Protein Homology CDS 40349 40639 . + 0 ID=cds-HJH9172442.1;Parent=gene-O5C65_002329;Dbxref=NCBI_GP:HJH9172442.1;Name=HJH9172442.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264433.1;locus_tag=O5C65_002329;product=helix-turn-helix domain-containing protein;protein_id=HJH9172442.1;transl_table=11 DALFDA020000014.1 tpg gene 40686 41615 . - . ID=gene-O5C65_002330;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=O5C65_002330 DALFDA020000014.1 Protein Homology CDS 40686 41615 . - 0 ID=cds-HJH9172443.1;Parent=gene-O5C65_002330;Dbxref=NCBI_GP:HJH9172443.1;Name=HJH9172443.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=O5C65_002330;product=formate dehydrogenase accessory protein FdhE;protein_id=HJH9172443.1;transl_table=11 DALFDA020000014.1 tpg gene 41612 42247 . - . ID=gene-O5C65_002331;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=O5C65_002331 DALFDA020000014.1 Protein Homology CDS 41612 42247 . - 0 ID=cds-HJH9172444.1;Parent=gene-O5C65_002331;Dbxref=NCBI_GP:HJH9172444.1;Name=HJH9172444.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462915.1;locus_tag=O5C65_002331;product=formate dehydrogenase cytochrome b556 subunit;protein_id=HJH9172444.1;transl_table=11 DALFDA020000014.1 tpg gene 42244 43146 . - . ID=gene-O5C65_002332;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=O5C65_002332 DALFDA020000014.1 Protein Homology CDS 42244 43146 . - 0 ID=cds-HJH9172445.1;Parent=gene-O5C65_002332;Dbxref=NCBI_GP:HJH9172445.1;Name=HJH9172445.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462916.1;locus_tag=O5C65_002332;product=formate dehydrogenase subunit beta;protein_id=HJH9172445.1;transl_table=11 DALFDA020000014.1 tpg gene 43159 46209 . - . ID=gene-O5C65_002333;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=O5C65_002333 DALFDA020000014.1 Protein Homology CDS 43159 46209 . - 0 ID=cds-HJH9172446.1;Parent=gene-O5C65_002333;Dbxref=NCBI_GP:HJH9172446.1;Name=HJH9172446.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=O5C65_002333;product=formate dehydrogenase-N subunit alpha;protein_id=HJH9172446.1;transl_except=(pos:complement(45622..45624)%2Caa:Sec);transl_table=11 DALFDA020000014.1 tpg gene 46404 47240 . + . ID=gene-O5C65_002334;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=O5C65_002334 DALFDA020000014.1 Protein Homology CDS 46404 47240 . + 0 ID=cds-HJH9172447.1;Parent=gene-O5C65_002334;Dbxref=NCBI_GP:HJH9172447.1;Name=HJH9172447.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462918.1;locus_tag=O5C65_002334;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=HJH9172447.1;transl_table=11 DALFDA020000014.1 tpg gene 47433 48533 . + . ID=gene-O5C65_002335;Name=O5C65_002335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002335 DALFDA020000014.1 Protein Homology CDS 47433 48533 . + 0 ID=cds-HJH9172448.1;Parent=gene-O5C65_002335;Dbxref=NCBI_GP:HJH9172448.1;Name=HJH9172448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828052.1;locus_tag=O5C65_002335;product=DUF3829 domain-containing protein;protein_id=HJH9172448.1;transl_table=11 DALFDA020000014.1 tpg gene 48889 49212 . - . ID=gene-O5C65_002336;Name=O5C65_002336;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002336 DALFDA020000014.1 Protein Homology CDS 48889 49212 . - 0 ID=cds-HJH9172449.1;Parent=gene-O5C65_002336;Dbxref=NCBI_GP:HJH9172449.1;Name=HJH9172449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462921.1;locus_tag=O5C65_002336;product=AzlD domain-containing protein;protein_id=HJH9172449.1;transl_table=11 DALFDA020000014.1 tpg gene 49212 49871 . - . ID=gene-O5C65_002337;Name=O5C65_002337;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002337 DALFDA020000014.1 Protein Homology CDS 49212 49871 . - 0 ID=cds-HJH9172450.1;Parent=gene-O5C65_002337;Dbxref=NCBI_GP:HJH9172450.1;Name=HJH9172450.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462922.1;locus_tag=O5C65_002337;product=AzlC family ABC transporter permease;protein_id=HJH9172450.1;transl_table=11 DALFDA020000014.1 tpg gene 49972 50520 . + . ID=gene-O5C65_002338;Name=O5C65_002338;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002338 DALFDA020000014.1 Protein Homology CDS 49972 50520 . + 0 ID=cds-HJH9172451.1;Parent=gene-O5C65_002338;Dbxref=NCBI_GP:HJH9172451.1;Name=HJH9172451.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855902.1;locus_tag=O5C65_002338;product=helix-turn-helix domain-containing protein;protein_id=HJH9172451.1;transl_table=11 DALFDA020000014.1 tpg gene 50609 50923 . - . ID=gene-O5C65_002339;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=O5C65_002339 DALFDA020000014.1 Protein Homology CDS 50609 50923 . - 0 ID=cds-HJH9172452.1;Parent=gene-O5C65_002339;Dbxref=NCBI_GP:HJH9172452.1;Name=HJH9172452.1;Ontology_term=GO:0019299,GO:0016857,GO:0062192,GO:0005737;gbkey=CDS;gene=rhaM;go_component=cytoplasm|0005737||IEA;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,L-rhamnose mutarotase activity|0062192||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462924.1;locus_tag=O5C65_002339;product=L-rhamnose mutarotase;protein_id=HJH9172452.1;transl_table=11 DALFDA020000014.1 tpg gene 50920 52068 . - . ID=gene-O5C65_002340;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=O5C65_002340 DALFDA020000014.1 Protein Homology CDS 50920 52068 . - 0 ID=cds-HJH9172453.1;Parent=gene-O5C65_002340;Dbxref=NCBI_GP:HJH9172453.1;Name=HJH9172453.1;Ontology_term=GO:0008912;gbkey=CDS;gene=fucO;go_function=lactaldehyde reductase activity|0008912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462925.1;locus_tag=O5C65_002340;product=lactaldehyde reductase;protein_id=HJH9172453.1;transl_table=11 DALFDA020000014.1 tpg gene 52195 53022 . - . ID=gene-O5C65_002341;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=O5C65_002341 DALFDA020000014.1 Protein Homology CDS 52195 53022 . - 0 ID=cds-HJH9172454.1;Parent=gene-O5C65_002341;Dbxref=NCBI_GP:HJH9172454.1;Name=HJH9172454.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462926.1;locus_tag=O5C65_002341;product=rhamnulose-1-phosphate aldolase;protein_id=HJH9172454.1;transl_table=11 DALFDA020000014.1 tpg gene 53165 54424 . - . ID=gene-O5C65_002342;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=O5C65_002342 DALFDA020000014.1 Protein Homology CDS 53165 54424 . - 0 ID=cds-HJH9172455.1;Parent=gene-O5C65_002342;Dbxref=NCBI_GP:HJH9172455.1;Name=HJH9172455.1;Ontology_term=GO:0019299,GO:0008740,GO:0030145;gbkey=CDS;gene=rhaA;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462927.1;locus_tag=O5C65_002342;product=L-rhamnose isomerase;protein_id=HJH9172455.1;transl_table=11 DALFDA020000014.1 tpg gene 54421 55890 . - . ID=gene-O5C65_002343;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=O5C65_002343 DALFDA020000014.1 Protein Homology CDS 54421 55890 . - 0 ID=cds-HJH9172456.1;Parent=gene-O5C65_002343;Dbxref=NCBI_GP:HJH9172456.1;Name=HJH9172456.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462928.1;locus_tag=O5C65_002343;product=rhamnulokinase;protein_id=HJH9172456.1;transl_table=11 DALFDA020000014.1 tpg gene 56178 57014 . + . ID=gene-O5C65_002344;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=O5C65_002344 DALFDA020000014.1 Protein Homology CDS 56178 57014 . + 0 ID=cds-HJH9172457.1;Parent=gene-O5C65_002344;Dbxref=NCBI_GP:HJH9172457.1;Name=HJH9172457.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462929.1;locus_tag=O5C65_002344;product=HTH-type transcriptional activator RhaS;protein_id=HJH9172457.1;transl_table=11 DALFDA020000014.1 tpg gene 57167 58015 . + . ID=gene-O5C65_002345;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=O5C65_002345 DALFDA020000014.1 Protein Homology CDS 57167 58015 . + 0 ID=cds-HJH9172458.1;Parent=gene-O5C65_002345;Dbxref=NCBI_GP:HJH9172458.1;Name=HJH9172458.1;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462930.1;locus_tag=O5C65_002345;product=HTH-type transcriptional activator RhaR;protein_id=HJH9172458.1;transl_table=11 DALFDA020000014.1 tpg gene 58012 59046 . - . ID=gene-O5C65_002346;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=O5C65_002346 DALFDA020000014.1 Protein Homology CDS 58012 59046 . - 0 ID=cds-HJH9172459.1;Parent=gene-O5C65_002346;Dbxref=NCBI_GP:HJH9172459.1;Name=HJH9172459.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462931.1;locus_tag=O5C65_002346;product=L-rhamnose/proton symporter RhaT;protein_id=HJH9172459.1;transl_table=11 DALFDA020000014.1 tpg gene 59665 60348 . + . ID=gene-O5C65_002347;Name=O5C65_002347;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002347 DALFDA020000014.1 Protein Homology CDS 59665 60348 . + 0 ID=cds-HJH9172460.1;Parent=gene-O5C65_002347;Dbxref=NCBI_GP:HJH9172460.1;Name=HJH9172460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462932.3;locus_tag=O5C65_002347;product=oligogalacturonate-specific porin KdgM family protein;protein_id=HJH9172460.1;transl_table=11 DALFDA020000014.1 tpg gene 60506 61813 . - . ID=gene-O5C65_002348;Name=O5C65_002348;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002348 DALFDA020000014.1 Protein Homology CDS 60506 61813 . - 0 ID=cds-HJH9172461.1;Parent=gene-O5C65_002348;Dbxref=NCBI_GP:HJH9172461.1;Name=HJH9172461.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462933.1;locus_tag=O5C65_002348;product=TRAP transporter large permease;protein_id=HJH9172461.1;transl_table=11 DALFDA020000014.1 tpg gene 61806 62321 . - . ID=gene-O5C65_002349;Name=O5C65_002349;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002349 DALFDA020000014.1 Protein Homology CDS 61806 62321 . - 0 ID=cds-HJH9172462.1;Parent=gene-O5C65_002349;Dbxref=NCBI_GP:HJH9172462.1;Name=HJH9172462.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462934.1;locus_tag=O5C65_002349;product=TRAP transporter small permease;protein_id=HJH9172462.1;transl_table=11 DALFDA020000014.1 tpg gene 62340 63323 . - . ID=gene-O5C65_002350;Name=O5C65_002350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002350 DALFDA020000014.1 Protein Homology CDS 62340 63323 . - 0 ID=cds-HJH9172463.1;Parent=gene-O5C65_002350;Dbxref=NCBI_GP:HJH9172463.1;Name=HJH9172463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462935.1;locus_tag=O5C65_002350;product=TRAP transporter substrate-binding protein;protein_id=HJH9172463.1;transl_table=11 DALFDA020000014.1 tpg gene 63652 64272 . + . ID=gene-O5C65_002351;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=O5C65_002351 DALFDA020000014.1 Protein Homology CDS 63652 64272 . + 0 ID=cds-HJH9172464.1;Parent=gene-O5C65_002351;Dbxref=NCBI_GP:HJH9172464.1;Name=HJH9172464.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=O5C65_002351;product=superoxide dismutase [Mn];protein_id=HJH9172464.1;transl_table=11 DALFDA020000014.1 tpg gene 64342 65031 . + . ID=gene-O5C65_002352;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=O5C65_002352 DALFDA020000014.1 Protein Homology CDS 64342 65031 . + 0 ID=cds-HJH9172465.1;Parent=gene-O5C65_002352;Dbxref=NCBI_GP:HJH9172465.1;Name=HJH9172465.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559227.1;locus_tag=O5C65_002352;product=6-hydroxyaminopurine reductase;protein_id=HJH9172465.1;transl_table=11 DALFDA020000014.1 tpg gene 65043 65438 . + . ID=gene-O5C65_002353;Name=O5C65_002353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002353 DALFDA020000014.1 Protein Homology CDS 65043 65438 . + 0 ID=cds-HJH9172466.1;Parent=gene-O5C65_002353;Dbxref=NCBI_GP:HJH9172466.1;Name=HJH9172466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462938.1;locus_tag=O5C65_002353;product=nuclear transport factor 2 family protein;protein_id=HJH9172466.1;transl_table=11 DALFDA020000014.1 tpg gene 65489 66862 . - . ID=gene-O5C65_002354;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=O5C65_002354 DALFDA020000014.1 Protein Homology CDS 65489 66862 . - 0 ID=cds-HJH9172467.1;Parent=gene-O5C65_002354;Dbxref=NCBI_GP:HJH9172467.1;Name=HJH9172467.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462939.1;locus_tag=O5C65_002354;product=envelope stress sensor histidine kinase CpxA;protein_id=HJH9172467.1;transl_table=11 DALFDA020000014.1 tpg gene 66859 67557 . - . ID=gene-O5C65_002355;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=O5C65_002355 DALFDA020000014.1 Protein Homology CDS 66859 67557 . - 0 ID=cds-HJH9172468.1;Parent=gene-O5C65_002355;Dbxref=NCBI_GP:HJH9172468.1;Name=HJH9172468.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=O5C65_002355;product=envelope stress response regulator transcription factor CpxR;protein_id=HJH9172468.1;transl_table=11 DALFDA020000014.1 tpg gene 67708 68208 . + . ID=gene-O5C65_002356;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=O5C65_002356 DALFDA020000014.1 Protein Homology CDS 67708 68208 . + 0 ID=cds-HJH9172469.1;Parent=gene-O5C65_002356;Dbxref=NCBI_GP:HJH9172469.1;Name=HJH9172469.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462941.1;locus_tag=O5C65_002356;product=cell-envelope stress modulator CpxP;protein_id=HJH9172469.1;transl_table=11 DALFDA020000014.1 tpg gene 68560 69342 . + . ID=gene-O5C65_002357;Name=O5C65_002357;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002357 DALFDA020000014.1 Protein Homology CDS 68560 69342 . + 0 ID=cds-HJH9172470.1;Parent=gene-O5C65_002357;Dbxref=NCBI_GP:HJH9172470.1;Name=HJH9172470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932274.1;locus_tag=O5C65_002357;product=peptide transporter;protein_id=HJH9172470.1;transl_table=11 DALFDA020000014.1 tpg gene 69667 70569 . + . ID=gene-O5C65_002358;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=O5C65_002358 DALFDA020000014.1 Protein Homology CDS 69667 70569 . + 0 ID=cds-HJH9172471.1;Parent=gene-O5C65_002358;Dbxref=NCBI_GP:HJH9172471.1;Name=HJH9172471.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462942.1;locus_tag=O5C65_002358;product=CDF family cation-efflux transporter FieF;protein_id=HJH9172471.1;transl_table=11 DALFDA020000014.1 tpg gene 70754 71716 . + . ID=gene-O5C65_002359;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=O5C65_002359 DALFDA020000014.1 Protein Homology CDS 70754 71716 . + 0 ID=cds-HJH9172472.1;Parent=gene-O5C65_002359;Dbxref=NCBI_GP:HJH9172472.1;Name=HJH9172472.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=O5C65_002359;product=6-phosphofructokinase;protein_id=HJH9172472.1;transl_table=11 DALFDA020000014.1 tpg gene 71920 72909 . + . ID=gene-O5C65_002360;Name=O5C65_002360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002360 DALFDA020000014.1 Protein Homology CDS 71920 72909 . + 0 ID=cds-HJH9172473.1;Parent=gene-O5C65_002360;Dbxref=NCBI_GP:HJH9172473.1;Name=HJH9172473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=O5C65_002360;product=sulfate ABC transporter substrate-binding protein;protein_id=HJH9172473.1;transl_table=11 DALFDA020000014.1 tpg gene 73010 73765 . + . ID=gene-O5C65_002361;Name=O5C65_002361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002361 DALFDA020000014.1 Protein Homology CDS 73010 73765 . + 0 ID=cds-HJH9172474.1;Parent=gene-O5C65_002361;Dbxref=NCBI_GP:HJH9172474.1;Name=HJH9172474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=O5C65_002361;product=CDP-diacylglycerol diphosphatase;protein_id=HJH9172474.1;transl_table=11 DALFDA020000014.1 tpg gene 74028 75362 . + . ID=gene-O5C65_002362;Name=O5C65_002362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002362 DALFDA020000014.1 Protein Homology CDS 74028 75362 . + 0 ID=cds-HJH9172475.1;Parent=gene-O5C65_002362;Dbxref=NCBI_GP:HJH9172475.1;Name=HJH9172475.1;Ontology_term=GO:0008643,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462946.1;locus_tag=O5C65_002362;product=MFS transporter;protein_id=HJH9172475.1;transl_table=11 DALFDA020000014.1 tpg gene 75373 76332 . + . ID=gene-O5C65_002363;Name=O5C65_002363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002363 DALFDA020000014.1 Protein Homology CDS 75373 76332 . + 0 ID=cds-HJH9172476.1;Parent=gene-O5C65_002363;Dbxref=NCBI_GP:HJH9172476.1;Name=HJH9172476.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462947.1;locus_tag=O5C65_002363;product=aminoimidazole riboside kinase;protein_id=HJH9172476.1;transl_table=11 DALFDA020000014.1 tpg gene 76342 77382 . + . ID=gene-O5C65_002364;Name=O5C65_002364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002364 DALFDA020000014.1 Protein Homology CDS 76342 77382 . + 0 ID=cds-HJH9172477.1;Parent=gene-O5C65_002364;Dbxref=NCBI_GP:HJH9172477.1;Name=HJH9172477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462948.1;locus_tag=O5C65_002364;product=ADP-ribosylglycohydrolase family protein;protein_id=HJH9172477.1;transl_table=11 DALFDA020000014.1 tpg gene 77445 78167 . + . ID=gene-O5C65_002365;Name=O5C65_002365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002365 DALFDA020000014.1 Protein Homology CDS 77445 78167 . + 0 ID=cds-HJH9172478.1;Parent=gene-O5C65_002365;Dbxref=NCBI_GP:HJH9172478.1;Name=HJH9172478.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462949.1;locus_tag=O5C65_002365;product=GntR family transcriptional regulator;protein_id=HJH9172478.1;transl_table=11 DALFDA020000014.1 tpg pseudogene 78265 78390 . + . ID=gene-O5C65_002366;Name=O5C65_002366;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_002366;pseudo=true DALFDA020000014.1 Protein Homology CDS 78265 78390 . + 0 ID=cds-O5C65_002366;Parent=gene-O5C65_002366;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229472.1;locus_tag=O5C65_002366;product=hypothetical protein;pseudo=true;transl_table=11 DALFDA020000014.1 tpg pseudogene 78442 78582 . + . ID=gene-O5C65_002367;Name=O5C65_002367;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_002367;pseudo=true DALFDA020000014.1 Protein Homology CDS 78442 78582 . + 0 ID=cds-O5C65_002367;Parent=gene-O5C65_002367;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008654,GO:0008715,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol diphosphatase activity|0008715||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=O5C65_002367;product=CDP-diacylglycerol diphosphatase;pseudo=true;transl_table=11 DALFDA020000014.1 tpg gene 78672 79022 . - . ID=gene-O5C65_002368;Name=O5C65_002368;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002368 DALFDA020000014.1 Protein Homology CDS 78672 79022 . - 0 ID=cds-HJH9172479.1;Parent=gene-O5C65_002368;Dbxref=NCBI_GP:HJH9172479.1;Name=HJH9172479.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742380.1;locus_tag=O5C65_002368;product=cupin domain-containing protein;protein_id=HJH9172479.1;transl_table=11 DALFDA020000014.1 tpg gene 79036 80628 . - . ID=gene-O5C65_002369;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=O5C65_002369 DALFDA020000014.1 Protein Homology CDS 79036 80628 . - 0 ID=cds-HJH9172480.1;Parent=gene-O5C65_002369;Dbxref=NCBI_GP:HJH9172480.1;Name=HJH9172480.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462953.1;locus_tag=O5C65_002369;product=autoinducer-2 kinase;protein_id=HJH9172480.1;transl_table=11 DALFDA020000014.1 tpg gene 80717 81676 . - . ID=gene-O5C65_002370;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=O5C65_002370 DALFDA020000014.1 Protein Homology CDS 80717 81676 . - 0 ID=cds-HJH9172481.1;Parent=gene-O5C65_002370;Dbxref=NCBI_GP:HJH9172481.1;Name=HJH9172481.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462954.1;locus_tag=O5C65_002370;product=transcriptional regulator LsrR;protein_id=HJH9172481.1;transl_table=11 DALFDA020000014.1 tpg gene 81932 83467 . + . ID=gene-O5C65_002371;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=O5C65_002371 DALFDA020000014.1 Protein Homology CDS 81932 83467 . + 0 ID=cds-HJH9172482.1;Parent=gene-O5C65_002371;Dbxref=NCBI_GP:HJH9172482.1;Name=HJH9172482.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462955.1;locus_tag=O5C65_002371;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=HJH9172482.1;transl_table=11 DALFDA020000014.1 tpg gene 83461 84504 . + . ID=gene-O5C65_002372;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=O5C65_002372 DALFDA020000014.1 Protein Homology CDS 83461 84504 . + 0 ID=cds-HJH9172483.1;Parent=gene-O5C65_002372;Dbxref=NCBI_GP:HJH9172483.1;Name=HJH9172483.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462956.1;locus_tag=O5C65_002372;product=autoinducer 2 ABC transporter permease LsrC;protein_id=HJH9172483.1;transl_table=11 DALFDA020000014.1 tpg gene 84501 85502 . + . ID=gene-O5C65_002373;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=O5C65_002373 DALFDA020000014.1 Protein Homology CDS 84501 85502 . + 0 ID=cds-HJH9172484.1;Parent=gene-O5C65_002373;Dbxref=NCBI_GP:HJH9172484.1;Name=HJH9172484.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462957.1;locus_tag=O5C65_002373;product=autoinducer 2 ABC transporter permease LsrD;protein_id=HJH9172484.1;transl_table=11 DALFDA020000014.1 tpg gene 85531 86553 . + . ID=gene-O5C65_002374;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=O5C65_002374 DALFDA020000014.1 Protein Homology CDS 85531 86553 . + 0 ID=cds-HJH9172485.1;Parent=gene-O5C65_002374;Dbxref=NCBI_GP:HJH9172485.1;Name=HJH9172485.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462958.1;locus_tag=O5C65_002374;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=HJH9172485.1;transl_table=11 DALFDA020000014.1 tpg gene 86582 87457 . + . ID=gene-O5C65_002375;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=O5C65_002375 DALFDA020000014.1 Protein Homology CDS 86582 87457 . + 0 ID=cds-HJH9172486.1;Parent=gene-O5C65_002375;Dbxref=NCBI_GP:HJH9172486.1;Name=HJH9172486.1;gbkey=CDS;gene=lsrF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774144.1;locus_tag=O5C65_002375;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase LsrF;protein_id=HJH9172486.1;transl_table=11 DALFDA020000014.1 tpg gene 87540 87830 . + . ID=gene-O5C65_002376;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=O5C65_002376 DALFDA020000014.1 Protein Homology CDS 87540 87830 . + 0 ID=cds-HJH9172487.1;Parent=gene-O5C65_002376;Dbxref=NCBI_GP:HJH9172487.1;Name=HJH9172487.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=O5C65_002376;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=HJH9172487.1;transl_table=11 DALFDA020000014.1 tpg gene 87840 88604 . + . ID=gene-O5C65_002377;Name=O5C65_002377;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002377 DALFDA020000014.1 Protein Homology CDS 87840 88604 . + 0 ID=cds-HJH9172488.1;Parent=gene-O5C65_002377;Dbxref=NCBI_GP:HJH9172488.1;Name=HJH9172488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462961.1;locus_tag=O5C65_002377;product=epimerase;protein_id=HJH9172488.1;transl_table=11 DALFDA020000014.1 tpg gene 88696 89463 . - . ID=gene-O5C65_002378;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=O5C65_002378 DALFDA020000014.1 Protein Homology CDS 88696 89463 . - 0 ID=cds-HJH9172489.1;Parent=gene-O5C65_002378;Dbxref=NCBI_GP:HJH9172489.1;Name=HJH9172489.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462962.1;locus_tag=O5C65_002378;product=triose-phosphate isomerase;protein_id=HJH9172489.1;transl_table=11 DALFDA020000014.1 tpg gene 89576 90172 . - . ID=gene-O5C65_002379;Name=O5C65_002379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002379 DALFDA020000014.1 Protein Homology CDS 89576 90172 . - 0 ID=cds-HJH9172490.1;Parent=gene-O5C65_002379;Dbxref=NCBI_GP:HJH9172490.1;Name=HJH9172490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462963.1;locus_tag=O5C65_002379;product=YiiQ family protein;protein_id=HJH9172490.1;transl_table=11 DALFDA020000014.1 tpg gene 90273 90701 . + . ID=gene-O5C65_002380;Name=O5C65_002380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002380 DALFDA020000014.1 Protein Homology CDS 90273 90701 . + 0 ID=cds-HJH9172491.1;Parent=gene-O5C65_002380;Dbxref=NCBI_GP:HJH9172491.1;Name=HJH9172491.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462964.1;locus_tag=O5C65_002380;product=DUF805 domain-containing protein;protein_id=HJH9172491.1;transl_table=11 DALFDA020000014.1 tpg gene 90808 91554 . - . ID=gene-O5C65_002381;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=O5C65_002381 DALFDA020000014.1 Protein Homology CDS 90808 91554 . - 0 ID=cds-HJH9172492.1;Parent=gene-O5C65_002381;Dbxref=NCBI_GP:HJH9172492.1;Name=HJH9172492.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462965.1;locus_tag=O5C65_002381;product=ferredoxin--NADP(+) reductase;protein_id=HJH9172492.1;transl_table=11 DALFDA020000014.1 tpg gene 91651 92661 . - . ID=gene-O5C65_002382;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=O5C65_002382 DALFDA020000014.1 Protein Homology CDS 91651 92661 . - 0 ID=cds-HJH9172493.1;Parent=gene-O5C65_002382;Dbxref=NCBI_GP:HJH9172493.1;Name=HJH9172493.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462966.1;locus_tag=O5C65_002382;product=class II fructose-bisphosphatase;protein_id=HJH9172493.1;transl_table=11 DALFDA020000014.1 tpg gene 92773 94281 . - . ID=gene-O5C65_002383;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=O5C65_002383 DALFDA020000014.1 Protein Homology CDS 92773 94281 . - 0 ID=cds-HJH9172494.1;Parent=gene-O5C65_002383;Dbxref=NCBI_GP:HJH9172494.1;Name=HJH9172494.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462967.1;locus_tag=O5C65_002383;product=glycerol kinase GlpK;protein_id=HJH9172494.1;transl_table=11 DALFDA020000014.1 tpg gene 94302 95147 . - . ID=gene-O5C65_002384;Name=O5C65_002384;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002384 DALFDA020000014.1 Protein Homology CDS 94302 95147 . - 0 ID=cds-HJH9172495.1;Parent=gene-O5C65_002384;Dbxref=NCBI_GP:HJH9172495.1;Name=HJH9172495.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462968.1;locus_tag=O5C65_002384;product=MIP/aquaporin family protein;protein_id=HJH9172495.1;transl_table=11 DALFDA020000014.1 tpg gene 95546 95785 . + . ID=gene-O5C65_002385;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=O5C65_002385 DALFDA020000014.1 Protein Homology CDS 95546 95785 . + 0 ID=cds-HJH9172496.1;Parent=gene-O5C65_002385;Dbxref=NCBI_GP:HJH9172496.1;Name=HJH9172496.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229475.1;locus_tag=O5C65_002385;product=septal ring assembly protein ZapB;protein_id=HJH9172496.1;transl_table=11 DALFDA020000014.1 tpg gene 96007 96492 . - . ID=gene-O5C65_002386;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=O5C65_002386 DALFDA020000014.1 Protein Homology CDS 96007 96492 . - 0 ID=cds-HJH9172497.1;Parent=gene-O5C65_002386;Dbxref=NCBI_GP:HJH9172497.1;Name=HJH9172497.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=O5C65_002386;product=ribonuclease E activity regulator RraA;protein_id=HJH9172497.1;transl_table=11 DALFDA020000014.1 tpg gene 96585 97514 . - . ID=gene-O5C65_002387;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=O5C65_002387 DALFDA020000014.1 Protein Homology CDS 96585 97514 . - 0 ID=cds-HJH9172498.1;Parent=gene-O5C65_002387;Dbxref=NCBI_GP:HJH9172498.1;Name=HJH9172498.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462971.1;locus_tag=O5C65_002387;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=HJH9172498.1;transl_table=11 DALFDA020000014.1 tpg gene 97581 98912 . - . ID=gene-O5C65_002388;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=O5C65_002388 DALFDA020000014.1 Protein Homology CDS 97581 98912 . - 0 ID=cds-HJH9172499.1;Parent=gene-O5C65_002388;Dbxref=NCBI_GP:HJH9172499.1;Name=HJH9172499.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=O5C65_002388;product=HslU--HslV peptidase ATPase subunit;protein_id=HJH9172499.1;transl_table=11 DALFDA020000014.1 tpg gene 98922 99452 . - . ID=gene-O5C65_002389;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=O5C65_002389 DALFDA020000014.1 Protein Homology CDS 98922 99452 . - 0 ID=cds-HJH9172500.1;Parent=gene-O5C65_002389;Dbxref=NCBI_GP:HJH9172500.1;Name=HJH9172500.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462973.1;locus_tag=O5C65_002389;product=ATP-dependent protease subunit HslV;protein_id=HJH9172500.1;transl_table=11 DALFDA020000014.1 tpg gene 99544 100512 . - . ID=gene-O5C65_002390;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=O5C65_002390 DALFDA020000014.1 Protein Homology CDS 99544 100512 . - 0 ID=cds-HJH9172501.1;Parent=gene-O5C65_002390;Dbxref=NCBI_GP:HJH9172501.1;Name=HJH9172501.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462974.1;locus_tag=O5C65_002390;product=cell division protein FtsN;protein_id=HJH9172501.1;transl_table=11 DALFDA020000014.1 tpg gene 100606 101631 . - . ID=gene-O5C65_002391;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=O5C65_002391 DALFDA020000014.1 Protein Homology CDS 100606 101631 . - 0 ID=cds-HJH9172502.1;Parent=gene-O5C65_002391;Dbxref=NCBI_GP:HJH9172502.1;Name=HJH9172502.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462975.1;locus_tag=O5C65_002391;product=DNA-binding transcriptional regulator CytR;protein_id=HJH9172502.1;transl_table=11 DALFDA020000014.1 tpg gene 101786 103984 . - . ID=gene-O5C65_002392;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=O5C65_002392 DALFDA020000014.1 Protein Homology CDS 101786 103984 . - 0 ID=cds-HJH9172503.1;Parent=gene-O5C65_002392;Dbxref=NCBI_GP:HJH9172503.1;Name=HJH9172503.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462976.1;locus_tag=O5C65_002392;product=primosomal protein N';protein_id=HJH9172503.1;transl_table=11 DALFDA020000014.1 tpg gene 104188 104400 . + . ID=gene-O5C65_002393;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=O5C65_002393 DALFDA020000014.1 Protein Homology CDS 104188 104400 . + 0 ID=cds-HJH9172504.1;Parent=gene-O5C65_002393;Dbxref=NCBI_GP:HJH9172504.1;Name=HJH9172504.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462977.1;locus_tag=O5C65_002393;product=50S ribosomal protein L31;protein_id=HJH9172504.1;transl_table=11 DALFDA020000014.1 tpg pseudogene 104680 104793 . + . ID=gene-O5C65_002394;Name=O5C65_002394;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_002394;pseudo=true DALFDA020000014.1 Protein Homology CDS 104680 104793 . + 0 ID=cds-O5C65_002394;Parent=gene-O5C65_002394;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308587.2;locus_tag=O5C65_002394;product=hypothetical protein;pseudo=true;transl_table=11 DALFDA020000014.1 tpg gene 105396 107186 . - . ID=gene-O5C65_002395;Name=O5C65_002395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002395 DALFDA020000014.1 Protein Homology CDS 105396 107186 . - 0 ID=cds-HJH9172505.1;Parent=gene-O5C65_002395;Dbxref=NCBI_GP:HJH9172505.1;Name=HJH9172505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462979.1;locus_tag=O5C65_002395;product=aryl-sulfate sulfotransferase;protein_id=HJH9172505.1;transl_table=11 DALFDA020000014.1 tpg gene 107643 107960 . - . ID=gene-O5C65_002396;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=O5C65_002396 DALFDA020000014.1 Protein Homology CDS 107643 107960 . - 0 ID=cds-HJH9172506.1;Parent=gene-O5C65_002396;Dbxref=NCBI_GP:HJH9172506.1;Name=HJH9172506.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=O5C65_002396;product=met regulon transcriptional regulator MetJ;protein_id=HJH9172506.1;transl_table=11 DALFDA020000014.1 tpg gene 108225 109385 . + . ID=gene-O5C65_002397;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=O5C65_002397 DALFDA020000014.1 Protein Homology CDS 108225 109385 . + 0 ID=cds-HJH9172507.1;Parent=gene-O5C65_002397;Dbxref=NCBI_GP:HJH9172507.1;Name=HJH9172507.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462981.1;locus_tag=O5C65_002397;product=cystathionine gamma-synthase;protein_id=HJH9172507.1;transl_table=11 DALFDA020000014.1 tpg gene 109388 111820 . + . ID=gene-O5C65_002398;Name=O5C65_002398;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002398 DALFDA020000014.1 Protein Homology CDS 109388 111820 . + 0 ID=cds-HJH9172508.1;Parent=gene-O5C65_002398;Dbxref=NCBI_GP:HJH9172508.1;Name=HJH9172508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=O5C65_002398;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=HJH9172508.1;transl_table=11 DALFDA020000014.1 tpg gene 111946 112803 . - . ID=gene-O5C65_002399;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=O5C65_002399 DALFDA020000014.1 Protein Homology CDS 111946 112803 . - 0 ID=cds-HJH9172509.1;Parent=gene-O5C65_002399;Dbxref=NCBI_GP:HJH9172509.1;Name=HJH9172509.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462983.1;locus_tag=O5C65_002399;product=small-conductance mechanosensitive channel MscS;protein_id=HJH9172509.1;transl_table=11 DALFDA020000014.1 tpg gene 112806 113804 . - . ID=gene-O5C65_002400;Name=O5C65_002400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002400 DALFDA020000014.1 Protein Homology CDS 112806 113804 . - 0 ID=cds-HJH9172510.1;Parent=gene-O5C65_002400;Dbxref=NCBI_GP:HJH9172510.1;Name=HJH9172510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406820.1;locus_tag=O5C65_002400;product=hypothetical protein;protein_id=HJH9172510.1;transl_table=11 DALFDA020000014.1 tpg gene 114039 115163 . - . ID=gene-O5C65_002401;Name=O5C65_002401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002401 DALFDA020000014.1 Protein Homology CDS 114039 115163 . - 0 ID=cds-HJH9172511.1;Parent=gene-O5C65_002401;Dbxref=NCBI_GP:HJH9172511.1;Name=HJH9172511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462984.1;locus_tag=O5C65_002401;product=cytoplasmic protein;protein_id=HJH9172511.1;transl_table=11 DALFDA020000014.1 tpg gene 115299 116855 . + . ID=gene-O5C65_002402;Name=O5C65_002402;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002402 DALFDA020000014.1 Protein Homology CDS 115299 116855 . + 0 ID=cds-HJH9172512.1;Parent=gene-O5C65_002402;Dbxref=NCBI_GP:HJH9172512.1;Name=HJH9172512.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462985.1;locus_tag=O5C65_002402;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=HJH9172512.1;transl_table=11 DALFDA020000014.1 tpg gene 117050 117940 . + . ID=gene-O5C65_002403;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=O5C65_002403 DALFDA020000014.1 Protein Homology CDS 117050 117940 . + 0 ID=cds-HJH9172513.1;Parent=gene-O5C65_002403;Dbxref=NCBI_GP:HJH9172513.1;Name=HJH9172513.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462986.1;locus_tag=O5C65_002403;product=methylenetetrahydrofolate reductase;protein_id=HJH9172513.1;transl_table=11 DALFDA020000014.1 tpg gene 118105 120285 . + . ID=gene-O5C65_002404;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=O5C65_002404 DALFDA020000014.1 Protein Homology CDS 118105 120285 . + 0 ID=cds-HJH9172514.1;Parent=gene-O5C65_002404;Dbxref=NCBI_GP:HJH9172514.1;Name=HJH9172514.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462987.1;locus_tag=O5C65_002404;product=catalase/peroxidase HPI;protein_id=HJH9172514.1;transl_table=11 DALFDA020000014.1 tpg gene 120343 120966 . - . ID=gene-O5C65_002405;Name=O5C65_002405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002405 DALFDA020000014.1 Protein Homology CDS 120343 120966 . - 0 ID=cds-HJH9172515.1;Parent=gene-O5C65_002405;Dbxref=NCBI_GP:HJH9172515.1;Name=HJH9172515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462988.1;locus_tag=O5C65_002405;product=DUF1287 domain-containing protein;protein_id=HJH9172515.1;transl_table=11 DALFDA020000014.1 tpg gene 121225 122328 . - . ID=gene-O5C65_002406;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=O5C65_002406 DALFDA020000014.1 Protein Homology CDS 121225 122328 . - 0 ID=cds-HJH9172516.1;Parent=gene-O5C65_002406;Dbxref=NCBI_GP:HJH9172516.1;Name=HJH9172516.1;Ontology_term=GO:0019588,GO:0051596,GO:0008888,GO:0019147;gbkey=CDS;gene=gldA;go_function=glycerol dehydrogenase (NAD+) activity|0008888||IEA,(R)-aminopropanol dehydrogenase activity|0019147||IEA;go_process=anaerobic glycerol catabolic process|0019588||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462989.1;locus_tag=O5C65_002406;product=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;protein_id=HJH9172516.1;transl_table=11 DALFDA020000014.1 tpg gene 122340 123002 . - . ID=gene-O5C65_002407;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=O5C65_002407 DALFDA020000014.1 Protein Homology CDS 122340 123002 . - 0 ID=cds-HJH9172517.1;Parent=gene-O5C65_002407;Dbxref=NCBI_GP:HJH9172517.1;Name=HJH9172517.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462990.1;locus_tag=O5C65_002407;product=fructose-6-phosphate aldolase;protein_id=HJH9172517.1;transl_table=11 DALFDA020000014.1 tpg gene 123257 124093 . - . ID=gene-O5C65_002408;Name=O5C65_002408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002408 DALFDA020000014.1 Protein Homology CDS 123257 124093 . - 0 ID=cds-HJH9172518.1;Parent=gene-O5C65_002408;Dbxref=NCBI_GP:HJH9172518.1;Name=HJH9172518.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506508.1;locus_tag=O5C65_002408;product=helix-turn-helix transcriptional regulator;protein_id=HJH9172518.1;transl_table=11 DALFDA020000014.1 tpg gene 124254 125987 . - . ID=gene-O5C65_002409;Name=O5C65_002409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002409 DALFDA020000014.1 Protein Homology CDS 124254 125987 . - 0 ID=cds-HJH9172519.1;Parent=gene-O5C65_002409;Dbxref=NCBI_GP:HJH9172519.1;Name=HJH9172519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462998.1;locus_tag=O5C65_002409;product=phosphoethanolamine transferase CptA;protein_id=HJH9172519.1;transl_table=11 DALFDA020000014.1 tpg gene 126198 128849 . - . ID=gene-O5C65_002410;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=O5C65_002410 DALFDA020000014.1 Protein Homology CDS 126198 128849 . - 0 ID=cds-HJH9172520.1;Parent=gene-O5C65_002410;Dbxref=NCBI_GP:HJH9172520.1;Name=HJH9172520.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=O5C65_002410;product=phosphoenolpyruvate carboxylase;protein_id=HJH9172520.1;transl_table=11 DALFDA020000014.1 tpg gene 129218 130369 . - . ID=gene-O5C65_002411;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=O5C65_002411 DALFDA020000014.1 Protein Homology CDS 129218 130369 . - 0 ID=cds-HJH9172521.1;Parent=gene-O5C65_002411;Dbxref=NCBI_GP:HJH9172521.1;Name=HJH9172521.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463000.1;locus_tag=O5C65_002411;product=acetylornithine deacetylase;protein_id=HJH9172521.1;transl_table=11 DALFDA020000014.1 tpg gene 130458 131462 . + . ID=gene-O5C65_002412;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=O5C65_002412 DALFDA020000014.1 Protein Homology CDS 130458 131462 . + 0 ID=cds-HJH9172522.1;Parent=gene-O5C65_002412;Dbxref=NCBI_GP:HJH9172522.1;Name=HJH9172522.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=O5C65_002412;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=HJH9172522.1;transl_table=11 DALFDA020000014.1 tpg gene 131470 132246 . + . ID=gene-O5C65_002413;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=O5C65_002413 DALFDA020000014.1 Protein Homology CDS 131470 132246 . + 0 ID=cds-HJH9172523.1;Parent=gene-O5C65_002413;Dbxref=NCBI_GP:HJH9172523.1;Name=HJH9172523.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463002.3;locus_tag=O5C65_002413;product=acetylglutamate kinase;protein_id=HJH9172523.1;transl_table=11 DALFDA020000014.1 tpg gene 132364 133740 . + . ID=gene-O5C65_002414;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=O5C65_002414 DALFDA020000014.1 Protein Homology CDS 132364 133740 . + 0 ID=cds-HJH9172524.1;Parent=gene-O5C65_002414;Dbxref=NCBI_GP:HJH9172524.1;Name=HJH9172524.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463003.1;locus_tag=O5C65_002414;product=argininosuccinate lyase;protein_id=HJH9172524.1;transl_table=11 DALFDA020000014.1 tpg gene 134025 134942 . + . ID=gene-O5C65_002415;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=O5C65_002415 DALFDA020000014.1 Protein Homology CDS 134025 134942 . + 0 ID=cds-HJH9172525.1;Parent=gene-O5C65_002415;Dbxref=NCBI_GP:HJH9172525.1;Name=HJH9172525.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=O5C65_002415;product=DNA-binding transcriptional regulator OxyR;protein_id=HJH9172525.1;transl_table=11 DALFDA020000014.1 tpg gene 134925 136325 . - . ID=gene-O5C65_002416;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=O5C65_002416 DALFDA020000014.1 Protein Homology CDS 134925 136325 . - 0 ID=cds-HJH9172526.1;Parent=gene-O5C65_002416;Dbxref=NCBI_GP:HJH9172526.1;Name=HJH9172526.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=O5C65_002416;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=HJH9172526.1;transl_table=11 DALFDA020000014.1 tpg gene 136524 137159 . + . ID=gene-O5C65_002417;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=O5C65_002417 DALFDA020000014.1 Protein Homology CDS 136524 137159 . + 0 ID=cds-HJH9172527.1;Parent=gene-O5C65_002417;Dbxref=NCBI_GP:HJH9172527.1;Name=HJH9172527.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463006.3;locus_tag=O5C65_002417;product=HTH-type transcriptional repressor FabR;protein_id=HJH9172527.1;transl_table=11 DALFDA020000014.1 tpg gene 137175 137534 . + . ID=gene-O5C65_002418;Name=O5C65_002418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002418 DALFDA020000014.1 Protein Homology CDS 137175 137534 . + 0 ID=cds-HJH9172528.1;Parent=gene-O5C65_002418;Dbxref=NCBI_GP:HJH9172528.1;Name=HJH9172528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463007.1;locus_tag=O5C65_002418;product=YijD family membrane protein;protein_id=HJH9172528.1;transl_table=11 DALFDA020000014.1 tpg gene 137581 138681 . - . ID=gene-O5C65_002419;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=O5C65_002419 DALFDA020000014.1 Protein Homology CDS 137581 138681 . - 0 ID=cds-HJH9172529.1;Parent=gene-O5C65_002419;Dbxref=NCBI_GP:HJH9172529.1;Name=HJH9172529.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463008.1;locus_tag=O5C65_002419;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=HJH9172529.1;transl_table=11 DALFDA020000014.1 cmsearch riboswitch 138796 138988 . + . ID=id-DALFDA020000014.1:138796..138988;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch DALFDA020000014.1 tpg pseudogene 139055 140899 . + . ID=gene-O5C65_002420;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=pseudogene;locus_tag=O5C65_002420;pseudo=true DALFDA020000014.1 Protein Homology CDS 139055 140899 . + 0 ID=cds-O5C65_002420;Parent=gene-O5C65_002420;Note=internal stop;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463009.1;locus_tag=O5C65_002420;product=TonB-dependent vitamin B12 receptor BtuB;pseudo=true;transl_table=11 DALFDA020000014.1 tpg gene 140844 141695 . + . ID=gene-O5C65_002421;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=O5C65_002421 DALFDA020000014.1 Protein Homology CDS 140844 141695 . + 0 ID=cds-HJH9172530.1;Parent=gene-O5C65_002421;Dbxref=NCBI_GP:HJH9172530.1;Name=HJH9172530.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463010.1;locus_tag=O5C65_002421;product=glutamate racemase;protein_id=HJH9172530.1;transl_table=11 ##sequence-region DALFDA020000015.1 1 126928 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000015.1 tpg region 1 126928 . + . ID=DALFDA020000015.1:1..126928;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000015.1 tpg gene 37 717 . - . ID=gene-O5C65_002422;Name=O5C65_002422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002422 DALFDA020000015.1 Protein Homology CDS 37 717 . - 0 ID=cds-HJH9172531.1;Parent=gene-O5C65_002422;Dbxref=NCBI_GP:HJH9172531.1;Name=HJH9172531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462660.1;locus_tag=O5C65_002422;product=isochorismatase family protein;protein_id=HJH9172531.1;transl_table=11 DALFDA020000015.1 tpg gene 1501 2358 . + . ID=gene-O5C65_002423;Name=O5C65_002423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002423 DALFDA020000015.1 Protein Homology CDS 1501 2358 . + 0 ID=cds-HJH9172532.1;Parent=gene-O5C65_002423;Dbxref=NCBI_GP:HJH9172532.1;Name=HJH9172532.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462658.4;locus_tag=O5C65_002423;product=winged helix-turn-helix domain-containing protein;protein_id=HJH9172532.1;transl_table=11 DALFDA020000015.1 tpg gene 2369 2833 . + . ID=gene-O5C65_002424;Name=O5C65_002424;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002424 DALFDA020000015.1 Protein Homology CDS 2369 2833 . + 0 ID=cds-HJH9172533.1;Parent=gene-O5C65_002424;Dbxref=NCBI_GP:HJH9172533.1;Name=HJH9172533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462657.1;locus_tag=O5C65_002424;product=hypothetical protein;protein_id=HJH9172533.1;transl_table=11 DALFDA020000015.1 tpg gene 2928 5795 . - . ID=gene-O5C65_002425;Name=misL;gbkey=Gene;gene=misL;gene_biotype=protein_coding;locus_tag=O5C65_002425 DALFDA020000015.1 Protein Homology CDS 2928 5795 . - 0 ID=cds-HJH9172534.1;Parent=gene-O5C65_002425;Dbxref=NCBI_GP:HJH9172534.1;Name=HJH9172534.1;gbkey=CDS;gene=misL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462656.1;locus_tag=O5C65_002425;product=intestinal colonization autotransporter adhesin MisL;protein_id=HJH9172534.1;transl_table=11 DALFDA020000015.1 tpg gene 5870 6487 . - . ID=gene-O5C65_002426;Name=O5C65_002426;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002426 DALFDA020000015.1 Protein Homology CDS 5870 6487 . - 0 ID=cds-HJH9172535.1;Parent=gene-O5C65_002426;Dbxref=NCBI_GP:HJH9172535.1;Name=HJH9172535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462655.1;locus_tag=O5C65_002426;product=helix-turn-helix transcriptional regulator;protein_id=HJH9172535.1;transl_table=11 DALFDA020000015.1 tpg pseudogene 7244 7354 . - . ID=gene-O5C65_002427;Name=O5C65_002427;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_002427;pseudo=true DALFDA020000015.1 Protein Homology CDS 7244 7354 . - 0 ID=cds-O5C65_002427;Parent=gene-O5C65_002427;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671526.1;locus_tag=O5C65_002427;product=transposase;pseudo=true;transl_table=11 DALFDA020000015.1 tpg pseudogene 7501 7632 . + . ID=gene-O5C65_002428;Name=O5C65_002428;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_002428;pseudo=true DALFDA020000015.1 Protein Homology CDS 7501 7632 . + 0 ID=cds-O5C65_002428;Parent=gene-O5C65_002428;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_354625806.1;locus_tag=O5C65_002428;product=transposase;pseudo=true;transl_table=11 DALFDA020000015.1 tpg gene 7786 8823 . - . ID=gene-O5C65_002429;Name=rhuM;gbkey=Gene;gene=rhuM;gene_biotype=protein_coding;locus_tag=O5C65_002429 DALFDA020000015.1 Protein Homology CDS 7786 8823 . - 0 ID=cds-HJH9172536.1;Parent=gene-O5C65_002429;Dbxref=NCBI_GP:HJH9172536.1;Name=HJH9172536.1;gbkey=CDS;gene=rhuM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462654.1;locus_tag=O5C65_002429;product=virulence protein RhuM;protein_id=HJH9172536.1;transl_table=11 DALFDA020000015.1 tpg pseudogene 8911 9327 . - . ID=gene-O5C65_002430;Name=O5C65_002430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_002430;pseudo=true DALFDA020000015.1 Protein Homology CDS 8911 9327 . - 0 ID=cds-O5C65_002430;Parent=gene-O5C65_002430;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227719.1;locus_tag=O5C65_002430;product=DUF4942 domain-containing protein;pseudo=true;transl_table=11 DALFDA020000015.1 tpg pseudogene 9357 10547 . - . ID=gene-O5C65_002431;Name=O5C65_002431;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_002431;pseudo=true DALFDA020000015.1 Protein Homology CDS 9357 10547 . - 0 ID=cds-O5C65_002431;Parent=gene-O5C65_002431;Note=internal stop;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462652.1;locus_tag=O5C65_002431;product=AAA family ATPase;pseudo=true;transl_table=11 DALFDA020000015.1 tpg gene 10682 10849 . - . ID=gene-O5C65_002432;Name=O5C65_002432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002432 DALFDA020000015.1 Protein Homology CDS 10682 10849 . - 0 ID=cds-HJH9172537.1;Parent=gene-O5C65_002432;Dbxref=NCBI_GP:HJH9172537.1;Name=HJH9172537.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018465.6;locus_tag=O5C65_002432;product=TA system toxin CbtA family protein;protein_id=HJH9172537.1;transl_table=11 DALFDA020000015.1 tpg gene 11221 11565 . + . ID=gene-O5C65_002433;Name=O5C65_002433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002433 DALFDA020000015.1 Protein Homology CDS 11221 11565 . + 0 ID=cds-HJH9172538.1;Parent=gene-O5C65_002433;Dbxref=NCBI_GP:HJH9172538.1;Name=HJH9172538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462651.1;locus_tag=O5C65_002433;product=hypothetical protein;protein_id=HJH9172538.1;transl_table=11 DALFDA020000015.1 tpg gene 12199 14532 . - . ID=gene-O5C65_002434;Name=O5C65_002434;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002434 DALFDA020000015.1 Protein Homology CDS 12199 14532 . - 0 ID=cds-HJH9172539.1;Parent=gene-O5C65_002434;Dbxref=NCBI_GP:HJH9172539.1;Name=HJH9172539.1;Ontology_term=GO:0003899,GO:0004386,GO:0008270;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA,helicase activity|0004386||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000783702.1;locus_tag=O5C65_002434;product=primase-helicase zinc-binding domain-containing protein;protein_id=HJH9172539.1;transl_table=11 DALFDA020000015.1 tpg gene 14547 14867 . - . ID=gene-O5C65_002435;Name=O5C65_002435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002435 DALFDA020000015.1 Protein Homology CDS 14547 14867 . - 0 ID=cds-HJH9172540.1;Parent=gene-O5C65_002435;Dbxref=NCBI_GP:HJH9172540.1;Name=HJH9172540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224852.1;locus_tag=O5C65_002435;product=DUF5375 domain-containing protein;protein_id=HJH9172540.1;transl_table=11 DALFDA020000015.1 tpg gene 14864 15091 . - . ID=gene-O5C65_002436;Name=O5C65_002436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002436 DALFDA020000015.1 Protein Homology CDS 14864 15091 . - 0 ID=cds-HJH9172541.1;Parent=gene-O5C65_002436;Dbxref=NCBI_GP:HJH9172541.1;Name=HJH9172541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001216597.1;locus_tag=O5C65_002436;product=hypothetical protein;protein_id=HJH9172541.1;transl_table=11 DALFDA020000015.1 tpg gene 15088 15639 . - . ID=gene-O5C65_002437;Name=O5C65_002437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002437 DALFDA020000015.1 Protein Homology CDS 15088 15639 . - 0 ID=cds-HJH9172542.1;Parent=gene-O5C65_002437;Dbxref=NCBI_GP:HJH9172542.1;Name=HJH9172542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136111.1;locus_tag=O5C65_002437;product=host cell division inhibitor Icd-like protein;protein_id=HJH9172542.1;transl_table=11 DALFDA020000015.1 tpg gene 15636 15902 . - . ID=gene-O5C65_002438;Name=O5C65_002438;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002438 DALFDA020000015.1 Protein Homology CDS 15636 15902 . - 0 ID=cds-HJH9172543.1;Parent=gene-O5C65_002438;Dbxref=NCBI_GP:HJH9172543.1;Name=HJH9172543.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224849.1;locus_tag=O5C65_002438;product=helix-turn-helix transcriptional regulator;protein_id=HJH9172543.1;transl_table=11 DALFDA020000015.1 tpg gene 16442 17179 . + . ID=gene-O5C65_002439;Name=O5C65_002439;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002439 DALFDA020000015.1 Protein Homology CDS 16442 17179 . + 0 ID=cds-HJH9172544.1;Parent=gene-O5C65_002439;Dbxref=NCBI_GP:HJH9172544.1;Name=HJH9172544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016234818.1;locus_tag=O5C65_002439;product=glycoprotein 3;protein_id=HJH9172544.1;transl_table=11 DALFDA020000015.1 tpg gene 17176 17421 . + . ID=gene-O5C65_002440;Name=O5C65_002440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002440 DALFDA020000015.1 Protein Homology CDS 17176 17421 . + 0 ID=cds-HJH9172545.1;Parent=gene-O5C65_002440;Dbxref=NCBI_GP:HJH9172545.1;Name=HJH9172545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000984207.1;locus_tag=O5C65_002440;product=ogr/Delta-like zinc finger family protein;protein_id=HJH9172545.1;transl_table=11 DALFDA020000015.1 tpg gene 17438 18004 . + . ID=gene-O5C65_002441;Name=O5C65_002441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002441 DALFDA020000015.1 Protein Homology CDS 17438 18004 . + 0 ID=cds-HJH9172546.1;Parent=gene-O5C65_002441;Dbxref=NCBI_GP:HJH9172546.1;Name=HJH9172546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210078.1;locus_tag=O5C65_002441;product=phage polarity suppression protein;protein_id=HJH9172546.1;transl_table=11 DALFDA020000015.1 tpg gene 18398 19030 . - . ID=gene-O5C65_002442;Name=O5C65_002442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002442 DALFDA020000015.1 Protein Homology CDS 18398 19030 . - 0 ID=cds-HJH9172547.1;Parent=gene-O5C65_002442;Dbxref=NCBI_GP:HJH9172547.1;Name=HJH9172547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001720775.1;locus_tag=O5C65_002442;product=hypothetical protein;protein_id=HJH9172547.1;transl_table=11 DALFDA020000015.1 tpg gene 19032 19898 . - . ID=gene-O5C65_002443;Name=O5C65_002443;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002443 DALFDA020000015.1 Protein Homology CDS 19032 19898 . - 0 ID=cds-HJH9172548.1;Parent=gene-O5C65_002443;Dbxref=NCBI_GP:HJH9172548.1;Name=HJH9172548.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754434.1;locus_tag=O5C65_002443;product=HAD family hydrolase;protein_id=HJH9172548.1;transl_table=11 DALFDA020000015.1 tpg gene 19955 21133 . - . ID=gene-O5C65_002444;Name=O5C65_002444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002444 DALFDA020000015.1 Protein Homology CDS 19955 21133 . - 0 ID=cds-HJH9172549.1;Parent=gene-O5C65_002444;Dbxref=NCBI_GP:HJH9172549.1;Name=HJH9172549.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001547907.1;locus_tag=O5C65_002444;product=tyrosine-type recombinase/integrase;protein_id=HJH9172549.1;transl_table=11 DALFDA020000015.1 tpg gene 21295 21389 . - . ID=gene-O5C65_002445;Name=O5C65_002445;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_002445 DALFDA020000015.1 tRNAscan-SE tRNA 21295 21389 . - . ID=rna-O5C65_002445;Parent=gene-O5C65_002445;anticodon=(pos:complement(21353..21355));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_002445;product=tRNA-Sec DALFDA020000015.1 tRNAscan-SE exon 21295 21389 . - . ID=exon-O5C65_002445-1;Parent=rna-O5C65_002445;anticodon=(pos:complement(21353..21355));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_002445;product=tRNA-Sec DALFDA020000015.1 tpg pseudogene 21677 23063 . + . ID=gene-O5C65_002446;Name=O5C65_002446;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_002446;pseudo=true DALFDA020000015.1 Protein Homology CDS 21677 23063 . + 0 ID=cds-O5C65_002446;Parent=gene-O5C65_002446;Note=frameshifted;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462650.1;locus_tag=O5C65_002446;product=glycoside-pentoside-hexuronide family transporter;pseudo=true;transl_table=11 DALFDA020000015.1 tpg gene 23075 25393 . + . ID=gene-O5C65_002447;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=O5C65_002447 DALFDA020000015.1 Protein Homology CDS 23075 25393 . + 0 ID=cds-HJH9172550.1;Parent=gene-O5C65_002447;Dbxref=NCBI_GP:HJH9172550.1;Name=HJH9172550.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462649.1;locus_tag=O5C65_002447;product=alpha-xylosidase;protein_id=HJH9172550.1;transl_table=11 DALFDA020000015.1 tpg gene 25496 27205 . - . ID=gene-O5C65_002448;Name=O5C65_002448;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002448 DALFDA020000015.1 Protein Homology CDS 25496 27205 . - 0 ID=cds-HJH9172551.1;Parent=gene-O5C65_002448;Dbxref=NCBI_GP:HJH9172551.1;Name=HJH9172551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462648.1;locus_tag=O5C65_002448;product=AsmA family protein;protein_id=HJH9172551.1;transl_table=11 DALFDA020000015.1 tpg gene 27326 28717 . - . ID=gene-O5C65_002449;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=O5C65_002449 DALFDA020000015.1 Protein Homology CDS 27326 28717 . - 0 ID=cds-HJH9172552.1;Parent=gene-O5C65_002449;Dbxref=NCBI_GP:HJH9172552.1;Name=HJH9172552.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462647.1;locus_tag=O5C65_002449;product=xanthine/proton symporter XanP;protein_id=HJH9172552.1;transl_table=11 DALFDA020000015.1 tpg gene 28945 30150 . + . ID=gene-O5C65_002450;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=O5C65_002450 DALFDA020000015.1 Protein Homology CDS 28945 30150 . + 0 ID=cds-HJH9172553.1;Parent=gene-O5C65_002450;Dbxref=NCBI_GP:HJH9172553.1;Name=HJH9172553.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462646.1;locus_tag=O5C65_002450;product=sodium/glutamate symporter;protein_id=HJH9172553.1;transl_table=11 DALFDA020000015.1 tpg gene 30153 31004 . + . ID=gene-O5C65_002451;Name=O5C65_002451;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002451 DALFDA020000015.1 Protein Homology CDS 30153 31004 . + 0 ID=cds-HJH9172554.1;Parent=gene-O5C65_002451;Dbxref=NCBI_GP:HJH9172554.1;Name=HJH9172554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462645.1;locus_tag=O5C65_002451;product=hypothetical protein;protein_id=HJH9172554.1;transl_table=11 DALFDA020000015.1 tpg gene 31007 33088 . - . ID=gene-O5C65_002452;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=O5C65_002452 DALFDA020000015.1 Protein Homology CDS 31007 33088 . - 0 ID=cds-HJH9172555.1;Parent=gene-O5C65_002452;Dbxref=NCBI_GP:HJH9172555.1;Name=HJH9172555.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462644.1;locus_tag=O5C65_002452;product=ATP-dependent DNA helicase RecG;protein_id=HJH9172555.1;transl_table=11 DALFDA020000015.1 tpg gene 33094 33783 . - . ID=gene-O5C65_002453;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=O5C65_002453 DALFDA020000015.1 Protein Homology CDS 33094 33783 . - 0 ID=cds-HJH9172556.1;Parent=gene-O5C65_002453;Dbxref=NCBI_GP:HJH9172556.1;Name=HJH9172556.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462643.1;locus_tag=O5C65_002453;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=HJH9172556.1;transl_table=11 DALFDA020000015.1 tpg gene 33788 35899 . - . ID=gene-O5C65_002454;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=O5C65_002454 DALFDA020000015.1 Protein Homology CDS 33788 35899 . - 0 ID=cds-HJH9172557.1;Parent=gene-O5C65_002454;Dbxref=NCBI_GP:HJH9172557.1;Name=HJH9172557.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462642.1;locus_tag=O5C65_002454;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=HJH9172557.1;transl_table=11 DALFDA020000015.1 tpg gene 35918 36193 . - . ID=gene-O5C65_002455;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=O5C65_002455 DALFDA020000015.1 Protein Homology CDS 35918 36193 . - 0 ID=cds-HJH9172558.1;Parent=gene-O5C65_002455;Dbxref=NCBI_GP:HJH9172558.1;Name=HJH9172558.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=O5C65_002455;product=DNA-directed RNA polymerase subunit omega;protein_id=HJH9172558.1;transl_table=11 DALFDA020000015.1 tpg gene 36248 36871 . - . ID=gene-O5C65_002456;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=O5C65_002456 DALFDA020000015.1 Protein Homology CDS 36248 36871 . - 0 ID=cds-HJH9172559.1;Parent=gene-O5C65_002456;Dbxref=NCBI_GP:HJH9172559.1;Name=HJH9172559.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=O5C65_002456;product=guanylate kinase;protein_id=HJH9172559.1;transl_table=11 DALFDA020000015.1 tpg gene 37128 38813 . + . ID=gene-O5C65_002457;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=O5C65_002457 DALFDA020000015.1 Protein Homology CDS 37128 38813 . + 0 ID=cds-HJH9172560.1;Parent=gene-O5C65_002457;Dbxref=NCBI_GP:HJH9172560.1;Name=HJH9172560.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462639.1;locus_tag=O5C65_002457;product=NAD-dependent DNA ligase LigB;protein_id=HJH9172560.1;transl_table=11 DALFDA020000015.1 tpg gene 38810 39427 . - . ID=gene-O5C65_002458;Name=O5C65_002458;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002458 DALFDA020000015.1 Protein Homology CDS 38810 39427 . - 0 ID=cds-HJH9172561.1;Parent=gene-O5C65_002458;Dbxref=NCBI_GP:HJH9172561.1;Name=HJH9172561.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462638.1;locus_tag=O5C65_002458;product=trimeric intracellular cation channel family protein;protein_id=HJH9172561.1;transl_table=11 DALFDA020000015.1 tpg gene 39675 40559 . - . ID=gene-O5C65_002459;Name=O5C65_002459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002459 DALFDA020000015.1 Protein Homology CDS 39675 40559 . - 0 ID=cds-HJH9172562.1;Parent=gene-O5C65_002459;Dbxref=NCBI_GP:HJH9172562.1;Name=HJH9172562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001083230.1;locus_tag=O5C65_002459;product=HARLDQ motif MBL-fold protein;protein_id=HJH9172562.1;transl_table=11 DALFDA020000015.1 tpg gene 40633 41535 . + . ID=gene-O5C65_002460;Name=O5C65_002460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002460 DALFDA020000015.1 Protein Homology CDS 40633 41535 . + 0 ID=cds-HJH9172563.1;Parent=gene-O5C65_002460;Dbxref=NCBI_GP:HJH9172563.1;Name=HJH9172563.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462636.1;locus_tag=O5C65_002460;product=LysR family transcriptional regulator;protein_id=HJH9172563.1;transl_table=11 DALFDA020000015.1 tpg gene 41585 42448 . - . ID=gene-O5C65_002461;Name=O5C65_002461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002461 DALFDA020000015.1 Protein Homology CDS 41585 42448 . - 0 ID=cds-HJH9172564.1;Parent=gene-O5C65_002461;Dbxref=NCBI_GP:HJH9172564.1;Name=HJH9172564.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=O5C65_002461;product=YicC/YloC family endoribonuclease;protein_id=HJH9172564.1;transl_table=11 DALFDA020000015.1 tpg gene 42574 43290 . + . ID=gene-O5C65_002462;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=O5C65_002462 DALFDA020000015.1 Protein Homology CDS 42574 43290 . + 0 ID=cds-HJH9172565.1;Parent=gene-O5C65_002462;Dbxref=NCBI_GP:HJH9172565.1;Name=HJH9172565.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=O5C65_002462;product=ribonuclease PH;protein_id=HJH9172565.1;transl_table=11 DALFDA020000015.1 tpg gene 43369 44010 . + . ID=gene-O5C65_002463;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=O5C65_002463 DALFDA020000015.1 Protein Homology CDS 43369 44010 . + 0 ID=cds-HJH9172566.1;Parent=gene-O5C65_002463;Dbxref=NCBI_GP:HJH9172566.1;Name=HJH9172566.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462633.1;locus_tag=O5C65_002463;product=orotate phosphoribosyltransferase;protein_id=HJH9172566.1;transl_table=11 DALFDA020000015.1 tpg gene 44088 44684 . - . ID=gene-O5C65_002464;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=O5C65_002464 DALFDA020000015.1 Protein Homology CDS 44088 44684 . - 0 ID=cds-HJH9172567.1;Parent=gene-O5C65_002464;Dbxref=NCBI_GP:HJH9172567.1;Name=HJH9172567.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=O5C65_002464;product=nucleoid occlusion factor SlmA;protein_id=HJH9172567.1;transl_table=11 DALFDA020000015.1 tpg gene 44792 45250 . - . ID=gene-O5C65_002465;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=O5C65_002465 DALFDA020000015.1 Protein Homology CDS 44792 45250 . - 0 ID=cds-HJH9172568.1;Parent=gene-O5C65_002465;Dbxref=NCBI_GP:HJH9172568.1;Name=HJH9172568.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=O5C65_002465;product=dUTP diphosphatase;protein_id=HJH9172568.1;transl_table=11 DALFDA020000015.1 tpg gene 45228 46448 . - . ID=gene-O5C65_002466;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=O5C65_002466 DALFDA020000015.1 Protein Homology CDS 45228 46448 . - 0 ID=cds-HJH9172569.1;Parent=gene-O5C65_002466;Dbxref=NCBI_GP:HJH9172569.1;Name=HJH9172569.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=O5C65_002466;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=HJH9172569.1;transl_table=11 DALFDA020000015.1 tpg gene 46624 47289 . + . ID=gene-O5C65_002467;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=O5C65_002467 DALFDA020000015.1 Protein Homology CDS 46624 47289 . + 0 ID=cds-HJH9172570.1;Parent=gene-O5C65_002467;Dbxref=NCBI_GP:HJH9172570.1;Name=HJH9172570.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462629.1;locus_tag=O5C65_002467;product=RadC family protein;protein_id=HJH9172570.1;transl_table=11 DALFDA020000015.1 tpg gene 47507 47743 . + . ID=gene-O5C65_002468;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=O5C65_002468 DALFDA020000015.1 Protein Homology CDS 47507 47743 . + 0 ID=cds-HJH9172571.1;Parent=gene-O5C65_002468;Dbxref=NCBI_GP:HJH9172571.1;Name=HJH9172571.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=O5C65_002468;product=50S ribosomal protein L28;protein_id=HJH9172571.1;transl_table=11 DALFDA020000015.1 tpg gene 47764 47931 . + . ID=gene-O5C65_002469;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=O5C65_002469 DALFDA020000015.1 Protein Homology CDS 47764 47931 . + 0 ID=cds-HJH9172572.1;Parent=gene-O5C65_002469;Dbxref=NCBI_GP:HJH9172572.1;Name=HJH9172572.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=O5C65_002469;product=50S ribosomal protein L33;protein_id=HJH9172572.1;transl_table=11 DALFDA020000015.1 tpg gene 48029 48838 . + . ID=gene-O5C65_002470;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=O5C65_002470 DALFDA020000015.1 Protein Homology CDS 48029 48838 . + 0 ID=cds-HJH9172573.1;Parent=gene-O5C65_002470;Dbxref=NCBI_GP:HJH9172573.1;Name=HJH9172573.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462626.1;locus_tag=O5C65_002470;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=HJH9172573.1;transl_table=11 DALFDA020000015.1 tpg gene 48866 49345 . - . ID=gene-O5C65_002471;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=O5C65_002471 DALFDA020000015.1 Protein Homology CDS 48866 49345 . - 0 ID=cds-HJH9172574.1;Parent=gene-O5C65_002471;Dbxref=NCBI_GP:HJH9172574.1;Name=HJH9172574.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462625.1;locus_tag=O5C65_002471;product=pantetheine-phosphate adenylyltransferase;protein_id=HJH9172574.1;transl_table=11 DALFDA020000015.1 tpg gene 49354 50631 . - . ID=gene-O5C65_002472;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=O5C65_002472 DALFDA020000015.1 Protein Homology CDS 49354 50631 . - 0 ID=cds-HJH9172575.1;Parent=gene-O5C65_002472;Dbxref=NCBI_GP:HJH9172575.1;Name=HJH9172575.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462624.1;locus_tag=O5C65_002472;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=HJH9172575.1;transl_table=11 DALFDA020000015.1 tpg gene 51040 52110 . + . ID=gene-O5C65_002473;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=O5C65_002473 DALFDA020000015.1 Protein Homology CDS 51040 52110 . + 0 ID=cds-HJH9172576.1;Parent=gene-O5C65_002473;Dbxref=NCBI_GP:HJH9172576.1;Name=HJH9172576.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521713.1;locus_tag=O5C65_002473;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=HJH9172576.1;transl_table=11 DALFDA020000015.1 tpg gene 52107 53231 . + . ID=gene-O5C65_002474;Name=O5C65_002474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002474 DALFDA020000015.1 Protein Homology CDS 52107 53231 . + 0 ID=cds-HJH9172577.1;Parent=gene-O5C65_002474;Dbxref=NCBI_GP:HJH9172577.1;Name=HJH9172577.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462622.1;locus_tag=O5C65_002474;product=glycosyltransferase family 4 protein;protein_id=HJH9172577.1;transl_table=11 DALFDA020000015.1 tpg gene 53224 54021 . + . ID=gene-O5C65_002475;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=O5C65_002475 DALFDA020000015.1 Protein Homology CDS 53224 54021 . + 0 ID=cds-HJH9172578.1;Parent=gene-O5C65_002475;Dbxref=NCBI_GP:HJH9172578.1;Name=HJH9172578.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462621.1;locus_tag=O5C65_002475;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=HJH9172578.1;transl_table=11 DALFDA020000015.1 tpg gene 54127 54999 . + . ID=gene-O5C65_002476;Name=O5C65_002476;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002476 DALFDA020000015.1 Protein Homology CDS 54127 54999 . + 0 ID=cds-HJH9172579.1;Parent=gene-O5C65_002476;Dbxref=NCBI_GP:HJH9172579.1;Name=HJH9172579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000280506.1;locus_tag=O5C65_002476;product=glycosyltransferase family 52;protein_id=HJH9172579.1;transl_table=11 DALFDA020000015.1 tpg gene 55085 56164 . + . ID=gene-O5C65_002477;Name=waaB;gbkey=Gene;gene=waaB;gene_biotype=protein_coding;gene_synonym=rfaB;locus_tag=O5C65_002477 DALFDA020000015.1 Protein Homology CDS 55085 56164 . + 0 ID=cds-HJH9172580.1;Parent=gene-O5C65_002477;Dbxref=NCBI_GP:HJH9172580.1;Name=HJH9172580.1;gbkey=CDS;gene=waaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462619.1;locus_tag=O5C65_002477;product=lipopolysaccharide 1%2C6-galactosyltransferase;protein_id=HJH9172580.1;transl_table=11 DALFDA020000015.1 tpg gene 56170 57183 . + . ID=gene-O5C65_002478;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=O5C65_002478 DALFDA020000015.1 Protein Homology CDS 56170 57183 . + 0 ID=cds-HJH9172581.1;Parent=gene-O5C65_002478;Dbxref=NCBI_GP:HJH9172581.1;Name=HJH9172581.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462618.1;locus_tag=O5C65_002478;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=HJH9172581.1;transl_table=11 DALFDA020000015.1 tpg gene 57201 58211 . + . ID=gene-O5C65_002479;Name=rfaJ;gbkey=Gene;gene=rfaJ;gene_biotype=protein_coding;locus_tag=O5C65_002479 DALFDA020000015.1 Protein Homology CDS 57201 58211 . + 0 ID=cds-HJH9172582.1;Parent=gene-O5C65_002479;Dbxref=NCBI_GP:HJH9172582.1;Name=HJH9172582.1;gbkey=CDS;gene=rfaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462617.1;locus_tag=O5C65_002479;product=lipopolysaccharide 1%2C2-glucosyltransferase RfaJ;protein_id=HJH9172582.1;transl_table=11 DALFDA020000015.1 tpg gene 58234 58932 . + . ID=gene-O5C65_002480;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=O5C65_002480 DALFDA020000015.1 Protein Homology CDS 58234 58932 . + 0 ID=cds-HJH9172583.1;Parent=gene-O5C65_002480;Dbxref=NCBI_GP:HJH9172583.1;Name=HJH9172583.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462616.1;locus_tag=O5C65_002480;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=HJH9172583.1;transl_table=11 DALFDA020000015.1 tpg gene 59082 59891 . + . ID=gene-O5C65_002481;Name=waaZ;gbkey=Gene;gene=waaZ;gene_biotype=protein_coding;locus_tag=O5C65_002481 DALFDA020000015.1 Protein Homology CDS 59082 59891 . + 0 ID=cds-HJH9172584.1;Parent=gene-O5C65_002481;Dbxref=NCBI_GP:HJH9172584.1;Name=HJH9172584.1;gbkey=CDS;gene=waaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462615.1;locus_tag=O5C65_002481;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;protein_id=HJH9172584.1;transl_table=11 DALFDA020000015.1 tpg gene 59991 61136 . + . ID=gene-O5C65_002482;Name=O5C65_002482;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002482 DALFDA020000015.1 Protein Homology CDS 59991 61136 . + 0 ID=cds-HJH9172585.1;Parent=gene-O5C65_002482;Dbxref=NCBI_GP:HJH9172585.1;Name=HJH9172585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462614.1;locus_tag=O5C65_002482;product=lipopolysaccharide N-acetylglucosaminyltransferase;protein_id=HJH9172585.1;transl_table=11 DALFDA020000015.1 tpg gene 61193 62407 . - . ID=gene-O5C65_002483;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=protein_coding;locus_tag=O5C65_002483 DALFDA020000015.1 Protein Homology CDS 61193 62407 . - 0 ID=cds-HJH9172586.1;Parent=gene-O5C65_002483;Dbxref=NCBI_GP:HJH9172586.1;Name=HJH9172586.1;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462613.1;locus_tag=O5C65_002483;product=O-antigen ligase RfaL;protein_id=HJH9172586.1;transl_table=11 DALFDA020000015.1 tpg gene 62447 63400 . - . ID=gene-O5C65_002484;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=O5C65_002484 DALFDA020000015.1 Protein Homology CDS 62447 63400 . - 0 ID=cds-HJH9172587.1;Parent=gene-O5C65_002484;Dbxref=NCBI_GP:HJH9172587.1;Name=HJH9172587.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462612.1;locus_tag=O5C65_002484;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=HJH9172587.1;transl_table=11 DALFDA020000015.1 tpg gene 63400 64446 . - . ID=gene-O5C65_002485;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=O5C65_002485 DALFDA020000015.1 Protein Homology CDS 63400 64446 . - 0 ID=cds-HJH9172588.1;Parent=gene-O5C65_002485;Dbxref=NCBI_GP:HJH9172588.1;Name=HJH9172588.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462611.1;locus_tag=O5C65_002485;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=HJH9172588.1;transl_table=11 DALFDA020000015.1 tpg gene 64449 65381 . - . ID=gene-O5C65_002486;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=O5C65_002486 DALFDA020000015.1 Protein Homology CDS 64449 65381 . - 0 ID=cds-HJH9172589.1;Parent=gene-O5C65_002486;Dbxref=NCBI_GP:HJH9172589.1;Name=HJH9172589.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=O5C65_002486;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=HJH9172589.1;transl_table=11 DALFDA020000015.1 tpg gene 65584 66780 . + . ID=gene-O5C65_002487;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=O5C65_002487 DALFDA020000015.1 Protein Homology CDS 65584 66780 . + 0 ID=cds-HJH9172590.1;Parent=gene-O5C65_002487;Dbxref=NCBI_GP:HJH9172590.1;Name=HJH9172590.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=O5C65_002487;product=glycine C-acetyltransferase;protein_id=HJH9172590.1;transl_table=11 DALFDA020000015.1 tpg gene 66790 67815 . + . ID=gene-O5C65_002488;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=O5C65_002488 DALFDA020000015.1 Protein Homology CDS 66790 67815 . + 0 ID=cds-HJH9172591.1;Parent=gene-O5C65_002488;Dbxref=NCBI_GP:HJH9172591.1;Name=HJH9172591.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=O5C65_002488;product=L-threonine 3-dehydrogenase;protein_id=HJH9172591.1;transl_table=11 DALFDA020000015.1 tpg pseudogene 68109 69132 . + . ID=gene-O5C65_002489;Name=O5C65_002489;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_002489;pseudo=true DALFDA020000015.1 Protein Homology CDS 68109 69132 . + 0 ID=cds-O5C65_002489;Parent=gene-O5C65_002489;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462607.1;locus_tag=O5C65_002489;product=glycosyltransferase;pseudo=true;transl_table=11 DALFDA020000015.1 tpg gene 69119 70081 . - . ID=gene-O5C65_002490;Name=O5C65_002490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002490 DALFDA020000015.1 Protein Homology CDS 69119 70081 . - 0 ID=cds-HJH9172592.1;Parent=gene-O5C65_002490;Dbxref=NCBI_GP:HJH9172592.1;Name=HJH9172592.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462606.1;locus_tag=O5C65_002490;product=divergent polysaccharide deacetylase family protein;protein_id=HJH9172592.1;transl_table=11 DALFDA020000015.1 tpg gene 70085 71344 . - . ID=gene-O5C65_002491;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=O5C65_002491 DALFDA020000015.1 Protein Homology CDS 70085 71344 . - 0 ID=cds-HJH9172593.1;Parent=gene-O5C65_002491;Dbxref=NCBI_GP:HJH9172593.1;Name=HJH9172593.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=O5C65_002491;product=murein hydrolase activator EnvC;protein_id=HJH9172593.1;transl_table=11 DALFDA020000015.1 tpg gene 71378 72922 . - . ID=gene-O5C65_002492;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=O5C65_002492 DALFDA020000015.1 Protein Homology CDS 71378 72922 . - 0 ID=cds-HJH9172594.1;Parent=gene-O5C65_002492;Dbxref=NCBI_GP:HJH9172594.1;Name=HJH9172594.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462604.1;locus_tag=O5C65_002492;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=HJH9172594.1;transl_table=11 DALFDA020000015.1 tpg gene 73170 73601 . + . ID=gene-O5C65_002493;Name=O5C65_002493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002493 DALFDA020000015.1 Protein Homology CDS 73170 73601 . + 0 ID=cds-HJH9172595.1;Parent=gene-O5C65_002493;Dbxref=NCBI_GP:HJH9172595.1;Name=HJH9172595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462603.1;locus_tag=O5C65_002493;product=rhodanese-like domain-containing protein;protein_id=HJH9172595.1;transl_table=11 DALFDA020000015.1 tpg gene 73687 73938 . + . ID=gene-O5C65_002494;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=O5C65_002494 DALFDA020000015.1 Protein Homology CDS 73687 73938 . + 0 ID=cds-HJH9172596.1;Parent=gene-O5C65_002494;Dbxref=NCBI_GP:HJH9172596.1;Name=HJH9172596.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462602.1;locus_tag=O5C65_002494;product=glutaredoxin 3;protein_id=HJH9172596.1;transl_table=11 DALFDA020000015.1 tpg gene 73982 74449 . + . ID=gene-O5C65_002495;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=O5C65_002495 DALFDA020000015.1 Protein Homology CDS 73982 74449 . + 0 ID=cds-HJH9172597.1;Parent=gene-O5C65_002495;Dbxref=NCBI_GP:HJH9172597.1;Name=HJH9172597.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=O5C65_002495;product=protein-export chaperone SecB;protein_id=HJH9172597.1;transl_table=11 DALFDA020000015.1 tpg gene 74449 75468 . + . ID=gene-O5C65_002496;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=O5C65_002496 DALFDA020000015.1 Protein Homology CDS 74449 75468 . + 0 ID=cds-HJH9172598.1;Parent=gene-O5C65_002496;Dbxref=NCBI_GP:HJH9172598.1;Name=HJH9172598.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462600.1;locus_tag=O5C65_002496;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=HJH9172598.1;transl_table=11 DALFDA020000015.1 tpg gene 75546 76367 . + . ID=gene-O5C65_002497;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=O5C65_002497 DALFDA020000015.1 Protein Homology CDS 75546 76367 . + 0 ID=cds-HJH9172599.1;Parent=gene-O5C65_002497;Dbxref=NCBI_GP:HJH9172599.1;Name=HJH9172599.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=O5C65_002497;product=serine O-acetyltransferase;protein_id=HJH9172599.1;transl_table=11 DALFDA020000015.1 tpg gene 76450 77760 . - . ID=gene-O5C65_002498;Name=O5C65_002498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002498 DALFDA020000015.1 Protein Homology CDS 76450 77760 . - 0 ID=cds-HJH9172600.1;Parent=gene-O5C65_002498;Dbxref=NCBI_GP:HJH9172600.1;Name=HJH9172600.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462598.1;locus_tag=O5C65_002498;product=MFS transporter;protein_id=HJH9172600.1;transl_table=11 DALFDA020000015.1 tpg gene 77834 79030 . - . ID=gene-O5C65_002499;Name=O5C65_002499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002499 DALFDA020000015.1 Protein Homology CDS 77834 79030 . - 0 ID=cds-HJH9172601.1;Parent=gene-O5C65_002499;Dbxref=NCBI_GP:HJH9172601.1;Name=HJH9172601.1;Ontology_term=GO:0046392,GO:1903663,GO:0008867,GO:1990594;gbkey=CDS;go_function=galactarate dehydratase activity|0008867||IEA,L-altrarate dehydratase activity|1990594||IEA;go_process=galactarate catabolic process|0046392||IEA,L-altrarate catabolic process|1903663||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462597.1;locus_tag=O5C65_002499;product=L-talarate/galactarate dehydratase;protein_id=HJH9172601.1;transl_table=11 DALFDA020000015.1 tpg gene 79349 80353 . + . ID=gene-O5C65_002500;Name=O5C65_002500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002500 DALFDA020000015.1 Protein Homology CDS 79349 80353 . + 0 ID=cds-HJH9172602.1;Parent=gene-O5C65_002500;Dbxref=NCBI_GP:HJH9172602.1;Name=HJH9172602.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462596.1;locus_tag=O5C65_002500;product=LacI family DNA-binding transcriptional regulator;protein_id=HJH9172602.1;transl_table=11 DALFDA020000015.1 tpg gene 80421 80894 . - . ID=gene-O5C65_002501;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=O5C65_002501 DALFDA020000015.1 Protein Homology CDS 80421 80894 . - 0 ID=cds-HJH9172603.1;Parent=gene-O5C65_002501;Dbxref=NCBI_GP:HJH9172603.1;Name=HJH9172603.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=O5C65_002501;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=HJH9172603.1;transl_table=11 DALFDA020000015.1 tpg gene 80959 82149 . - . ID=gene-O5C65_002502;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=O5C65_002502 DALFDA020000015.1 Protein Homology CDS 80959 82149 . - 0 ID=cds-HJH9172604.1;Parent=gene-O5C65_002502;Dbxref=NCBI_GP:HJH9172604.1;Name=HJH9172604.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462594.1;locus_tag=O5C65_002502;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=HJH9172604.1;transl_table=11 DALFDA020000015.1 tpg gene 82146 82922 . - . ID=gene-O5C65_002503;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=O5C65_002503 DALFDA020000015.1 Protein Homology CDS 82146 82922 . - 0 ID=cds-HJH9172605.1;Parent=gene-O5C65_002503;Dbxref=NCBI_GP:HJH9172605.1;Name=HJH9172605.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462593.1;locus_tag=O5C65_002503;product=transcriptional regulator LldR;protein_id=HJH9172605.1;transl_table=11 DALFDA020000015.1 tpg gene 82919 84574 . - . ID=gene-O5C65_002504;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=O5C65_002504 DALFDA020000015.1 Protein Homology CDS 82919 84574 . - 0 ID=cds-HJH9172606.1;Parent=gene-O5C65_002504;Dbxref=NCBI_GP:HJH9172606.1;Name=HJH9172606.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462592.1;locus_tag=O5C65_002504;product=L-lactate permease;protein_id=HJH9172606.1;transl_table=11 DALFDA020000015.1 tpg gene 84848 85210 . - . ID=gene-O5C65_002505;Name=O5C65_002505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002505 DALFDA020000015.1 Protein Homology CDS 84848 85210 . - 0 ID=cds-HJH9172607.1;Parent=gene-O5C65_002505;Dbxref=NCBI_GP:HJH9172607.1;Name=HJH9172607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462589.1;locus_tag=O5C65_002505;product=YibL family ribosome-associated protein;protein_id=HJH9172607.1;transl_table=11 DALFDA020000015.1 tpg gene 85501 85710 . + . ID=gene-O5C65_002506;Name=O5C65_002506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002506 DALFDA020000015.1 Protein Homology CDS 85501 85710 . + 0 ID=cds-HJH9172608.1;Parent=gene-O5C65_002506;Dbxref=NCBI_GP:HJH9172608.1;Name=HJH9172608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462588.1;locus_tag=O5C65_002506;product=hypothetical protein;protein_id=HJH9172608.1;transl_table=11 DALFDA020000015.1 tpg gene 85720 86310 . - . ID=gene-O5C65_002507;Name=O5C65_002507;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002507 DALFDA020000015.1 Protein Homology CDS 85720 86310 . - 0 ID=cds-HJH9172609.1;Parent=gene-O5C65_002507;Dbxref=NCBI_GP:HJH9172609.1;Name=HJH9172609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462587.1;locus_tag=O5C65_002507;product=MltR family transcriptional regulator;protein_id=HJH9172609.1;transl_table=11 DALFDA020000015.1 tpg gene 86307 87455 . - . ID=gene-O5C65_002508;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=O5C65_002508 DALFDA020000015.1 Protein Homology CDS 86307 87455 . - 0 ID=cds-HJH9172610.1;Parent=gene-O5C65_002508;Dbxref=NCBI_GP:HJH9172610.1;Name=HJH9172610.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462586.1;locus_tag=O5C65_002508;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=HJH9172610.1;transl_table=11 DALFDA020000015.1 tpg gene 87686 89602 . - . ID=gene-O5C65_002509;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=O5C65_002509 DALFDA020000015.1 Protein Homology CDS 87686 89602 . - 0 ID=cds-HJH9172611.1;Parent=gene-O5C65_002509;Dbxref=NCBI_GP:HJH9172611.1;Name=HJH9172611.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462585.1;locus_tag=O5C65_002509;product=PTS mannitol transporter subunit IICBA;protein_id=HJH9172611.1;transl_table=11 DALFDA020000015.1 tpg gene 90136 90498 . + . ID=gene-O5C65_002510;Name=O5C65_002510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002510 DALFDA020000015.1 Protein Homology CDS 90136 90498 . + 0 ID=cds-HJH9172612.1;Parent=gene-O5C65_002510;Dbxref=NCBI_GP:HJH9172612.1;Name=HJH9172612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418055.1;locus_tag=O5C65_002510;product=DUF3302 domain-containing protein;protein_id=HJH9172612.1;transl_table=11 DALFDA020000015.1 tpg gene 90501 91637 . + . ID=gene-O5C65_002511;Name=O5C65_002511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002511 DALFDA020000015.1 Protein Homology CDS 90501 91637 . + 0 ID=cds-HJH9172613.1;Parent=gene-O5C65_002511;Dbxref=NCBI_GP:HJH9172613.1;Name=HJH9172613.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312500.1;locus_tag=O5C65_002511;product=HlyD family secretion protein;protein_id=HJH9172613.1;transl_table=11 DALFDA020000015.1 tpg gene 91735 92343 . + . ID=gene-O5C65_002512;Name=O5C65_002512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002512 DALFDA020000015.1 Protein Homology CDS 91735 92343 . + 0 ID=cds-HJH9172614.1;Parent=gene-O5C65_002512;Dbxref=NCBI_GP:HJH9172614.1;Name=HJH9172614.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462584.1;locus_tag=O5C65_002512;product=glutathione S-transferase;protein_id=HJH9172614.1;transl_table=11 DALFDA020000015.1 tpg gene 92442 93833 . + . ID=gene-O5C65_002513;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=O5C65_002513 DALFDA020000015.1 Protein Homology CDS 92442 93833 . + 0 ID=cds-HJH9172615.1;Parent=gene-O5C65_002513;Dbxref=NCBI_GP:HJH9172615.1;Name=HJH9172615.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462583.1;locus_tag=O5C65_002513;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=HJH9172615.1;transl_table=11 DALFDA020000015.1 tpg gene 93830 95680 . + . ID=gene-O5C65_002514;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=O5C65_002514 DALFDA020000015.1 Protein Homology CDS 93830 95680 . + 0 ID=cds-HJH9172616.1;Parent=gene-O5C65_002514;Dbxref=NCBI_GP:HJH9172616.1;Name=HJH9172616.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462582.1;locus_tag=O5C65_002514;product=selenocysteine-specific translation elongation factor;protein_id=HJH9172616.1;transl_table=11 DALFDA020000015.1 tpg gene 95928 96809 . - . ID=gene-O5C65_002515;Name=O5C65_002515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002515 DALFDA020000015.1 Protein Homology CDS 95928 96809 . - 0 ID=cds-HJH9172617.1;Parent=gene-O5C65_002515;Dbxref=NCBI_GP:HJH9172617.1;Name=HJH9172617.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954677.1;locus_tag=O5C65_002515;product=ROK family protein;protein_id=HJH9172617.1;transl_table=11 DALFDA020000015.1 tpg gene 96978 98516 . + . ID=gene-O5C65_002516;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=O5C65_002516 DALFDA020000015.1 Protein Homology CDS 96978 98516 . + 0 ID=cds-HJH9172618.1;Parent=gene-O5C65_002516;Dbxref=NCBI_GP:HJH9172618.1;Name=HJH9172618.1;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462580.1;locus_tag=O5C65_002516;product=aldehyde dehydrogenase AldB;protein_id=HJH9172618.1;transl_table=11 DALFDA020000015.1 tpg gene 98802 100757 . - . ID=gene-O5C65_002517;Name=O5C65_002517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002517 DALFDA020000015.1 Protein Homology CDS 98802 100757 . - 0 ID=cds-HJH9172619.1;Parent=gene-O5C65_002517;Dbxref=NCBI_GP:HJH9172619.1;Name=HJH9172619.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462579.1;locus_tag=O5C65_002517;product=glycoside hydrolase family 127 protein;protein_id=HJH9172619.1;transl_table=11 DALFDA020000015.1 tpg gene 101021 101836 . + . ID=gene-O5C65_002518;Name=O5C65_002518;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002518 DALFDA020000015.1 Protein Homology CDS 101021 101836 . + 0 ID=cds-HJH9172620.1;Parent=gene-O5C65_002518;Dbxref=NCBI_GP:HJH9172620.1;Name=HJH9172620.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462578.1;locus_tag=O5C65_002518;product=helix-turn-helix domain-containing protein;protein_id=HJH9172620.1;transl_table=11 DALFDA020000015.1 tpg gene 101997 102692 . - . ID=gene-O5C65_002519;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=O5C65_002519 DALFDA020000015.1 Protein Homology CDS 101997 102692 . - 0 ID=cds-HJH9172621.1;Parent=gene-O5C65_002519;Dbxref=NCBI_GP:HJH9172621.1;Name=HJH9172621.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462577.1;locus_tag=O5C65_002519;product=L-ribulose-5-phosphate 4-epimerase;protein_id=HJH9172621.1;transl_table=11 DALFDA020000015.1 tpg gene 102686 103546 . - . ID=gene-O5C65_002520;Name=O5C65_002520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002520 DALFDA020000015.1 Protein Homology CDS 102686 103546 . - 0 ID=cds-HJH9172622.1;Parent=gene-O5C65_002520;Dbxref=NCBI_GP:HJH9172622.1;Name=HJH9172622.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462576.1;locus_tag=O5C65_002520;product=L-ribulose-5-phosphate 3-epimerase;protein_id=HJH9172622.1;transl_table=11 DALFDA020000015.1 tpg gene 103539 104201 . - . ID=gene-O5C65_002521;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=O5C65_002521 DALFDA020000015.1 Protein Homology CDS 103539 104201 . - 0 ID=cds-HJH9172623.1;Parent=gene-O5C65_002521;Dbxref=NCBI_GP:HJH9172623.1;Name=HJH9172623.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462575.1;locus_tag=O5C65_002521;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=HJH9172623.1;transl_table=11 DALFDA020000015.1 tpg gene 104198 105694 . - . ID=gene-O5C65_002522;Name=O5C65_002522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002522 DALFDA020000015.1 Protein Homology CDS 104198 105694 . - 0 ID=cds-HJH9172624.1;Parent=gene-O5C65_002522;Dbxref=NCBI_GP:HJH9172624.1;Name=HJH9172624.1;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462574.1;locus_tag=O5C65_002522;product=FGGY-family carbohydrate kinase;protein_id=HJH9172624.1;transl_table=11 DALFDA020000015.1 tpg gene 105698 106684 . - . ID=gene-O5C65_002523;Name=yiaO;gbkey=Gene;gene=yiaO;gene_biotype=protein_coding;locus_tag=O5C65_002523 DALFDA020000015.1 Protein Homology CDS 105698 106684 . - 0 ID=cds-HJH9172625.1;Parent=gene-O5C65_002523;Dbxref=NCBI_GP:HJH9172625.1;Name=HJH9172625.1;gbkey=CDS;gene=yiaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462573.1;locus_tag=O5C65_002523;product=2%2C3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO;protein_id=HJH9172625.1;transl_table=11 DALFDA020000015.1 tpg gene 106696 107973 . - . ID=gene-O5C65_002524;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=O5C65_002524 DALFDA020000015.1 Protein Homology CDS 106696 107973 . - 0 ID=cds-HJH9172626.1;Parent=gene-O5C65_002524;Dbxref=NCBI_GP:HJH9172626.1;Name=HJH9172626.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaN;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462572.1;locus_tag=O5C65_002524;product=2%2C3-diketo-L-gulonate TRAP transporter large permease YiaN;protein_id=HJH9172626.1;transl_table=11 DALFDA020000015.1 tpg gene 107976 108449 . - . ID=gene-O5C65_002525;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=O5C65_002525 DALFDA020000015.1 Protein Homology CDS 107976 108449 . - 0 ID=cds-HJH9172627.1;Parent=gene-O5C65_002525;Dbxref=NCBI_GP:HJH9172627.1;Name=HJH9172627.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaM;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462571.1;locus_tag=O5C65_002525;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=HJH9172627.1;transl_table=11 DALFDA020000015.1 tpg gene 108588 109520 . - . ID=gene-O5C65_002526;Name=O5C65_002526;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002526 DALFDA020000015.1 Protein Homology CDS 108588 109520 . - 0 ID=cds-HJH9172628.1;Parent=gene-O5C65_002526;Dbxref=NCBI_GP:HJH9172628.1;Name=HJH9172628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000794982.1;locus_tag=O5C65_002526;product=DUF4862 family protein;protein_id=HJH9172628.1;transl_table=11 DALFDA020000015.1 tpg gene 109544 110008 . - . ID=gene-O5C65_002527;Name=O5C65_002527;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002527 DALFDA020000015.1 Protein Homology CDS 109544 110008 . - 0 ID=cds-HJH9172629.1;Parent=gene-O5C65_002527;Dbxref=NCBI_GP:HJH9172629.1;Name=HJH9172629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462569.1;locus_tag=O5C65_002527;product=YhcH/YjgK/YiaL family protein;protein_id=HJH9172629.1;transl_table=11 DALFDA020000015.1 tpg gene 110020 111018 . - . ID=gene-O5C65_002528;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=O5C65_002528 DALFDA020000015.1 Protein Homology CDS 110020 111018 . - 0 ID=cds-HJH9172630.1;Parent=gene-O5C65_002528;Dbxref=NCBI_GP:HJH9172630.1;Name=HJH9172630.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462568.1;locus_tag=O5C65_002528;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=HJH9172630.1;transl_table=11 DALFDA020000015.1 tpg gene 111248 112048 . + . ID=gene-O5C65_002529;Name=O5C65_002529;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002529 DALFDA020000015.1 Protein Homology CDS 111248 112048 . + 0 ID=cds-HJH9172631.1;Parent=gene-O5C65_002529;Dbxref=NCBI_GP:HJH9172631.1;Name=HJH9172631.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462567.1;locus_tag=O5C65_002529;product=IclR family transcriptional regulator;protein_id=HJH9172631.1;transl_table=11 DALFDA020000015.1 tpg gene 112165 112638 . + . ID=gene-O5C65_002530;Name=O5C65_002530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002530 DALFDA020000015.1 Protein Homology CDS 112165 112638 . + 0 ID=cds-HJH9172632.1;Parent=gene-O5C65_002530;Dbxref=NCBI_GP:HJH9172632.1;Name=HJH9172632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462566.1;locus_tag=O5C65_002530;product=4Fe-4S dicluster domain-containing protein;protein_id=HJH9172632.1;transl_table=11 DALFDA020000015.1 tpg gene 112675 113925 . - . ID=gene-O5C65_002531;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=O5C65_002531 DALFDA020000015.1 Protein Homology CDS 112675 113925 . - 0 ID=cds-HJH9172633.1;Parent=gene-O5C65_002531;Dbxref=NCBI_GP:HJH9172633.1;Name=HJH9172633.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462565.1;locus_tag=O5C65_002531;product=valine--pyruvate transaminase;protein_id=HJH9172633.1;transl_table=11 DALFDA020000015.1 tpg gene 114099 116126 . - . ID=gene-O5C65_002532;Name=O5C65_002532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002532 DALFDA020000015.1 Protein Homology CDS 114099 116126 . - 0 ID=cds-HJH9172634.1;Parent=gene-O5C65_002532;Dbxref=NCBI_GP:HJH9172634.1;Name=HJH9172634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462564.1;locus_tag=O5C65_002532;product=alpha-amylase;protein_id=HJH9172634.1;transl_table=11 DALFDA020000015.1 tpg gene 116442 117266 . + . ID=gene-O5C65_002533;Name=O5C65_002533;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002533 DALFDA020000015.1 Protein Homology CDS 116442 117266 . + 0 ID=cds-HJH9172635.1;Parent=gene-O5C65_002533;Dbxref=NCBI_GP:HJH9172635.1;Name=HJH9172635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462563.1;locus_tag=O5C65_002533;product=protein bax;protein_id=HJH9172635.1;transl_table=11 DALFDA020000015.1 tpg gene 117327 118505 . - . ID=gene-O5C65_002534;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=O5C65_002534 DALFDA020000015.1 Protein Homology CDS 117327 118505 . - 0 ID=cds-HJH9172636.1;Parent=gene-O5C65_002534;Dbxref=NCBI_GP:HJH9172636.1;Name=HJH9172636.1;Note=D-xylose enhances binding of XylR to the xyl promoter and activates transcription.;gbkey=CDS;gene=xylR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462562.1;locus_tag=O5C65_002534;product=D-xylose utilization transcriptional activator XylR;protein_id=HJH9172636.1;transl_table=11 DALFDA020000015.1 tpg gene 118868 120190 . + . ID=gene-O5C65_002535;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=O5C65_002535 DALFDA020000015.1 Protein Homology CDS 118868 120190 . + 0 ID=cds-HJH9172637.1;Parent=gene-O5C65_002535;Dbxref=NCBI_GP:HJH9172637.1;Name=HJH9172637.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462561.1;locus_tag=O5C65_002535;product=xylose isomerase;protein_id=HJH9172637.1;transl_table=11 DALFDA020000015.1 tpg gene 120290 121744 . + . ID=gene-O5C65_002536;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=O5C65_002536 DALFDA020000015.1 Protein Homology CDS 120290 121744 . + 0 ID=cds-HJH9172638.1;Parent=gene-O5C65_002536;Dbxref=NCBI_GP:HJH9172638.1;Name=HJH9172638.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462560.1;locus_tag=O5C65_002536;product=xylulokinase;protein_id=HJH9172638.1;transl_table=11 DALFDA020000015.1 tpg gene 121919 122272 . + . ID=gene-O5C65_002537;Name=O5C65_002537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002537 DALFDA020000015.1 Protein Homology CDS 121919 122272 . + 0 ID=cds-HJH9172639.1;Parent=gene-O5C65_002537;Dbxref=NCBI_GP:HJH9172639.1;Name=HJH9172639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462559.1;locus_tag=O5C65_002537;product=YiaA/YiaB family inner membrane protein;protein_id=HJH9172639.1;transl_table=11 DALFDA020000015.1 tpg gene 122295 123290 . - . ID=gene-O5C65_002538;Name=O5C65_002538;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002538 DALFDA020000015.1 Protein Homology CDS 122295 123290 . - 0 ID=cds-HJH9172640.1;Parent=gene-O5C65_002538;Dbxref=NCBI_GP:HJH9172640.1;Name=HJH9172640.1;Ontology_term=GO:0016413,GO:0016747;gbkey=CDS;go_function=O-acetyltransferase activity|0016413||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462558.1;locus_tag=O5C65_002538;product=acyltransferase;protein_id=HJH9172640.1;transl_table=11 DALFDA020000015.1 tpg gene 123456 123758 . + . ID=gene-O5C65_002539;Name=O5C65_002539;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002539 DALFDA020000015.1 Protein Homology CDS 123456 123758 . + 0 ID=cds-HJH9172641.1;Parent=gene-O5C65_002539;Dbxref=NCBI_GP:HJH9172641.1;Name=HJH9172641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462557.1;locus_tag=O5C65_002539;product=YsaB family lipoprotein;protein_id=HJH9172641.1;transl_table=11 DALFDA020000015.1 tpg gene 123897 124808 . + . ID=gene-O5C65_002540;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=O5C65_002540 DALFDA020000015.1 Protein Homology CDS 123897 124808 . + 0 ID=cds-HJH9172642.1;Parent=gene-O5C65_002540;Dbxref=NCBI_GP:HJH9172642.1;Name=HJH9172642.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462556.1;locus_tag=O5C65_002540;product=glycine--tRNA ligase subunit alpha;protein_id=HJH9172642.1;transl_table=11 DALFDA020000015.1 tpg gene 124818 126887 . + . ID=gene-O5C65_002541;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=O5C65_002541 DALFDA020000015.1 Protein Homology CDS 124818 126887 . + 0 ID=cds-HJH9172643.1;Parent=gene-O5C65_002541;Dbxref=NCBI_GP:HJH9172643.1;Name=HJH9172643.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=O5C65_002541;product=glycine--tRNA ligase subunit beta;protein_id=HJH9172643.1;transl_table=11 ##sequence-region DALFDA020000016.1 1 126247 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000016.1 tpg region 1 126247 . + . ID=DALFDA020000016.1:1..126247;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000016.1 tpg gene 1 1115 . + . ID=gene-O5C65_002542;Name=O5C65_002542;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002542;partial=true;start_range=.,1 DALFDA020000016.1 Protein Homology CDS 1 1115 . + 2 ID=cds-HJH9172644.1;Parent=gene-O5C65_002542;Dbxref=NCBI_GP:HJH9172644.1;Name=HJH9172644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018352.1;locus_tag=O5C65_002542;partial=true;product=hypothetical protein;protein_id=HJH9172644.1;start_range=.,1;transl_table=11 DALFDA020000016.1 tpg gene 1119 1544 . + . ID=gene-O5C65_002543;Name=O5C65_002543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002543 DALFDA020000016.1 Protein Homology CDS 1119 1544 . + 0 ID=cds-HJH9172645.1;Parent=gene-O5C65_002543;Dbxref=NCBI_GP:HJH9172645.1;Name=HJH9172645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012565125.1;locus_tag=O5C65_002543;product=phage tail protein;protein_id=HJH9172645.1;transl_table=11 DALFDA020000016.1 tpg gene 1533 2108 . - . ID=gene-O5C65_002544;Name=O5C65_002544;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002544 DALFDA020000016.1 GeneMarkS-2+ CDS 1533 2108 . - 0 ID=cds-HJH9172646.1;Parent=gene-O5C65_002544;Dbxref=NCBI_GP:HJH9172646.1;Name=HJH9172646.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_002544;product=hypothetical protein;protein_id=HJH9172646.1;transl_table=11 DALFDA020000016.1 tpg gene 2134 2349 . + . ID=gene-O5C65_002545;Name=O5C65_002545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002545 DALFDA020000016.1 Protein Homology CDS 2134 2349 . + 0 ID=cds-HJH9172647.1;Parent=gene-O5C65_002545;Dbxref=NCBI_GP:HJH9172647.1;Name=HJH9172647.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017316.6;locus_tag=O5C65_002545;product=tail protein X;protein_id=HJH9172647.1;transl_table=11 DALFDA020000016.1 tpg gene 2508 3386 . + . ID=gene-O5C65_002546;Name=O5C65_002546;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002546 DALFDA020000016.1 Protein Homology CDS 2508 3386 . + 0 ID=cds-HJH9172648.1;Parent=gene-O5C65_002546;Dbxref=NCBI_GP:HJH9172648.1;Name=HJH9172648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001287093.1;locus_tag=O5C65_002546;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=HJH9172648.1;transl_table=11 DALFDA020000016.1 tpg gene 3938 4747 . - . ID=gene-O5C65_002547;Name=O5C65_002547;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002547 DALFDA020000016.1 Protein Homology CDS 3938 4747 . - 0 ID=cds-HJH9172649.1;Parent=gene-O5C65_002547;Dbxref=NCBI_GP:HJH9172649.1;Name=HJH9172649.1;Ontology_term=GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236845.1;locus_tag=O5C65_002547;product=KilA-N domain-containing protein;protein_id=HJH9172649.1;transl_table=11 DALFDA020000016.1 tpg gene 5066 6085 . + . ID=gene-O5C65_002548;Name=O5C65_002548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002548 DALFDA020000016.1 Protein Homology CDS 5066 6085 . + 0 ID=cds-HJH9172650.1;Parent=gene-O5C65_002548;Dbxref=NCBI_GP:HJH9172650.1;Name=HJH9172650.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019996.6;locus_tag=O5C65_002548;product=prophage tail fiber N-terminal domain-containing protein;protein_id=HJH9172650.1;transl_table=11 DALFDA020000016.1 tpg gene 6419 6694 . + . ID=gene-O5C65_002549;Name=O5C65_002549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002549 DALFDA020000016.1 Protein Homology CDS 6419 6694 . + 0 ID=cds-HJH9172651.1;Parent=gene-O5C65_002549;Dbxref=NCBI_GP:HJH9172651.1;Name=HJH9172651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460587.1;locus_tag=O5C65_002549;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=HJH9172651.1;transl_table=11 DALFDA020000016.1 tpg gene 6726 7844 . + . ID=gene-O5C65_002550;Name=O5C65_002550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002550 DALFDA020000016.1 Protein Homology CDS 6726 7844 . + 0 ID=cds-HJH9172652.1;Parent=gene-O5C65_002550;Dbxref=NCBI_GP:HJH9172652.1;Name=HJH9172652.1;Ontology_term=GO:0004022,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=O5C65_002550;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=HJH9172652.1;transl_table=11 DALFDA020000016.1 tpg gene 8013 9638 . + . ID=gene-O5C65_002551;Name=O5C65_002551;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002551 DALFDA020000016.1 Protein Homology CDS 8013 9638 . + 0 ID=cds-HJH9172653.1;Parent=gene-O5C65_002551;Dbxref=NCBI_GP:HJH9172653.1;Name=HJH9172653.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460585.2;locus_tag=O5C65_002551;product=methyl-accepting chemotaxis protein;protein_id=HJH9172653.1;transl_table=11 DALFDA020000016.1 tpg gene 9699 10622 . - . ID=gene-O5C65_002552;Name=O5C65_002552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002552 DALFDA020000016.1 Protein Homology CDS 9699 10622 . - 0 ID=cds-HJH9172654.1;Parent=gene-O5C65_002552;Dbxref=NCBI_GP:HJH9172654.1;Name=HJH9172654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460584.1;locus_tag=O5C65_002552;product=LysR substrate-binding domain-containing protein;protein_id=HJH9172654.1;transl_table=11 DALFDA020000016.1 tpg gene 10915 12258 . + . ID=gene-O5C65_002553;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;gene_synonym=ydcJ;locus_tag=O5C65_002553 DALFDA020000016.1 Protein Homology CDS 10915 12258 . + 0 ID=cds-HJH9172655.1;Parent=gene-O5C65_002553;Dbxref=NCBI_GP:HJH9172655.1;Name=HJH9172655.1;Ontology_term=GO:0051213;gbkey=CDS;gene=hglS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460583.1;locus_tag=O5C65_002553;product=2-oxoadipate dioxygenase/decarboxylase HglS;protein_id=HJH9172655.1;transl_table=11 DALFDA020000016.1 tpg gene 12307 13815 . + . ID=gene-O5C65_002554;Name=O5C65_002554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002554 DALFDA020000016.1 Protein Homology CDS 12307 13815 . + 0 ID=cds-HJH9172656.1;Parent=gene-O5C65_002554;Dbxref=NCBI_GP:HJH9172656.1;Name=HJH9172656.1;Ontology_term=GO:0016298,GO:0052689;gbkey=CDS;go_function=lipase activity|0016298||IEA,carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460582.1;locus_tag=O5C65_002554;product=carboxylesterase/lipase family protein;protein_id=HJH9172656.1;transl_table=11 DALFDA020000016.1 tpg gene 14035 15690 . + . ID=gene-O5C65_002555;Name=O5C65_002555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002555 DALFDA020000016.1 Protein Homology CDS 14035 15690 . + 0 ID=cds-HJH9172657.1;Parent=gene-O5C65_002555;Dbxref=NCBI_GP:HJH9172657.1;Name=HJH9172657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460581.1;locus_tag=O5C65_002555;product=glucan biosynthesis protein D;protein_id=HJH9172657.1;transl_table=11 DALFDA020000016.1 tpg gene 15886 16461 . + . ID=gene-O5C65_002556;Name=O5C65_002556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002556 DALFDA020000016.1 Protein Homology CDS 15886 16461 . + 0 ID=cds-HJH9172658.1;Parent=gene-O5C65_002556;Dbxref=NCBI_GP:HJH9172658.1;Name=HJH9172658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460580.1;locus_tag=O5C65_002556;product=YceI family protein;protein_id=HJH9172658.1;transl_table=11 DALFDA020000016.1 tpg gene 16639 17358 . - . ID=gene-O5C65_002557;Name=O5C65_002557;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002557 DALFDA020000016.1 Protein Homology CDS 16639 17358 . - 0 ID=cds-HJH9172659.1;Parent=gene-O5C65_002557;Dbxref=NCBI_GP:HJH9172659.1;Name=HJH9172659.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023780.1;locus_tag=O5C65_002557;product=FadR/GntR family transcriptional regulator;protein_id=HJH9172659.1;transl_table=11 DALFDA020000016.1 tpg gene 17449 18540 . - . ID=gene-O5C65_002558;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=O5C65_002558 DALFDA020000016.1 Protein Homology CDS 17449 18540 . - 0 ID=cds-HJH9172660.1;Parent=gene-O5C65_002558;Dbxref=NCBI_GP:HJH9172660.1;Name=HJH9172660.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131634.1;locus_tag=O5C65_002558;product=L-idonate 5-dehydrogenase;protein_id=HJH9172660.1;transl_table=11 DALFDA020000016.1 tpg gene 18509 19870 . - . ID=gene-O5C65_002559;Name=O5C65_002559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002559 DALFDA020000016.1 Protein Homology CDS 18509 19870 . - 0 ID=cds-HJH9172661.1;Parent=gene-O5C65_002559;Dbxref=NCBI_GP:HJH9172661.1;Name=HJH9172661.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000648132.1;locus_tag=O5C65_002559;product=MFS transporter;protein_id=HJH9172661.1;transl_table=11 DALFDA020000016.1 tpg gene 19954 20721 . - . ID=gene-O5C65_002560;Name=O5C65_002560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002560 DALFDA020000016.1 Protein Homology CDS 19954 20721 . - 0 ID=cds-HJH9172662.1;Parent=gene-O5C65_002560;Dbxref=NCBI_GP:HJH9172662.1;Name=HJH9172662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894239.1;locus_tag=O5C65_002560;product=SDR family oxidoreductase;protein_id=HJH9172662.1;transl_table=11 DALFDA020000016.1 tpg gene 21059 22312 . + . ID=gene-O5C65_002561;Name=O5C65_002561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002561 DALFDA020000016.1 Protein Homology CDS 21059 22312 . + 0 ID=cds-HJH9172663.1;Parent=gene-O5C65_002561;Dbxref=NCBI_GP:HJH9172663.1;Name=HJH9172663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000067287.1;locus_tag=O5C65_002561;product=enolase C-terminal domain-like protein;protein_id=HJH9172663.1;transl_table=11 DALFDA020000016.1 tpg gene 22453 22890 . - . ID=gene-O5C65_002562;Name=aac(6');gbkey=Gene;gene=aac(6');gene_biotype=protein_coding;locus_tag=O5C65_002562 DALFDA020000016.1 Protein Homology CDS 22453 22890 . - 0 ID=cds-HJH9172664.1;Parent=gene-O5C65_002562;Dbxref=NCBI_GP:HJH9172664.1;Name=HJH9172664.1;gbkey=CDS;gene=aac(6');inference=COORDINATES: similar to AA sequence:RefSeq:NP_460578.1;locus_tag=O5C65_002562;product=cryptic aminoglycoside N-acetyltransferase AAC(6')-Iy/Iaa;protein_id=HJH9172664.1;transl_table=11 DALFDA020000016.1 tpg gene 22890 23681 . - . ID=gene-O5C65_002563;Name=O5C65_002563;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002563 DALFDA020000016.1 Protein Homology CDS 22890 23681 . - 0 ID=cds-HJH9172665.1;Parent=gene-O5C65_002563;Dbxref=NCBI_GP:HJH9172665.1;Name=HJH9172665.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460577.1;locus_tag=O5C65_002563;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=HJH9172665.1;transl_table=11 DALFDA020000016.1 tpg gene 23697 24329 . - . ID=gene-O5C65_002564;Name=O5C65_002564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002564 DALFDA020000016.1 Protein Homology CDS 23697 24329 . - 0 ID=cds-HJH9172666.1;Parent=gene-O5C65_002564;Dbxref=NCBI_GP:HJH9172666.1;Name=HJH9172666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460576.1;locus_tag=O5C65_002564;product=ribulose-phosphate 3 epimerase family protein;protein_id=HJH9172666.1;transl_table=11 DALFDA020000016.1 tpg gene 24341 24778 . - . ID=gene-O5C65_002565;Name=sgcA;gbkey=Gene;gene=sgcA;gene_biotype=protein_coding;locus_tag=O5C65_002565 DALFDA020000016.1 Protein Homology CDS 24341 24778 . - 0 ID=cds-HJH9172667.1;Parent=gene-O5C65_002565;Dbxref=NCBI_GP:HJH9172667.1;Name=HJH9172667.1;gbkey=CDS;gene=sgcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460575.1;locus_tag=O5C65_002565;product=SgcA family PTS sugar transporter subunit IIA;protein_id=HJH9172667.1;transl_table=11 DALFDA020000016.1 tpg gene 24910 25716 . - . ID=gene-O5C65_002566;Name=sgcQ;gbkey=Gene;gene=sgcQ;gene_biotype=protein_coding;locus_tag=O5C65_002566 DALFDA020000016.1 Protein Homology CDS 24910 25716 . - 0 ID=cds-HJH9172668.1;Parent=gene-O5C65_002566;Dbxref=NCBI_GP:HJH9172668.1;Name=HJH9172668.1;gbkey=CDS;gene=sgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460574.1;locus_tag=O5C65_002566;product=BtpA family protein SgcQ;protein_id=HJH9172668.1;transl_table=11 DALFDA020000016.1 tpg gene 25730 27043 . - . ID=gene-O5C65_002567;Name=sgcC;gbkey=Gene;gene=sgcC;gene_biotype=protein_coding;locus_tag=O5C65_002567 DALFDA020000016.1 Protein Homology CDS 25730 27043 . - 0 ID=cds-HJH9172669.1;Parent=gene-O5C65_002567;Dbxref=NCBI_GP:HJH9172669.1;Name=HJH9172669.1;gbkey=CDS;gene=sgcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460573.1;locus_tag=O5C65_002567;product=PTS sugar transporter subunit IIC SgcC;protein_id=HJH9172669.1;transl_table=11 DALFDA020000016.1 tpg gene 27054 27335 . - . ID=gene-O5C65_002568;Name=sgcB;gbkey=Gene;gene=sgcB;gene_biotype=protein_coding;locus_tag=O5C65_002568 DALFDA020000016.1 Protein Homology CDS 27054 27335 . - 0 ID=cds-HJH9172670.1;Parent=gene-O5C65_002568;Dbxref=NCBI_GP:HJH9172670.1;Name=HJH9172670.1;gbkey=CDS;gene=sgcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460572.1;locus_tag=O5C65_002568;product=PTS sugar transporter subunit IIB SgcB;protein_id=HJH9172670.1;transl_table=11 DALFDA020000016.1 tpg gene 27332 28450 . - . ID=gene-O5C65_002569;Name=O5C65_002569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002569 DALFDA020000016.1 Protein Homology CDS 27332 28450 . - 0 ID=cds-HJH9172671.1;Parent=gene-O5C65_002569;Dbxref=NCBI_GP:HJH9172671.1;Name=HJH9172671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460571.1;locus_tag=O5C65_002569;product=M42 family metallopeptidase;protein_id=HJH9172671.1;transl_table=11 DALFDA020000016.1 tpg gene 28667 29206 . + . ID=gene-O5C65_002570;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=O5C65_002570 DALFDA020000016.1 Protein Homology CDS 28667 29206 . + 0 ID=cds-HJH9172672.1;Parent=gene-O5C65_002570;Dbxref=NCBI_GP:HJH9172672.1;Name=HJH9172672.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460570.1;locus_tag=O5C65_002570;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=HJH9172672.1;transl_table=11 DALFDA020000016.1 tpg gene 29203 30183 . - . ID=gene-O5C65_002571;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=O5C65_002571 DALFDA020000016.1 Protein Homology CDS 29203 30183 . - 0 ID=cds-HJH9172673.1;Parent=gene-O5C65_002571;Dbxref=NCBI_GP:HJH9172673.1;Name=HJH9172673.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460569.1;locus_tag=O5C65_002571;product=YdcK family protein;protein_id=HJH9172673.1;transl_table=11 DALFDA020000016.1 tpg gene 30290 31303 . + . ID=gene-O5C65_002572;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=O5C65_002572 DALFDA020000016.1 Protein Homology CDS 30290 31303 . + 0 ID=cds-HJH9172674.1;Parent=gene-O5C65_002572;Dbxref=NCBI_GP:HJH9172674.1;Name=HJH9172674.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460568.1;locus_tag=O5C65_002572;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=HJH9172674.1;transl_table=11 DALFDA020000016.1 tpg gene 31290 31886 . + . ID=gene-O5C65_002573;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=O5C65_002573 DALFDA020000016.1 Protein Homology CDS 31290 31886 . + 0 ID=cds-HJH9172675.1;Parent=gene-O5C65_002573;Dbxref=NCBI_GP:HJH9172675.1;Name=HJH9172675.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460567.1;locus_tag=O5C65_002573;product=tellurite resistance methyltransferase TehB;protein_id=HJH9172675.1;transl_table=11 DALFDA020000016.1 tpg gene 32042 32710 . + . ID=gene-O5C65_002574;Name=O5C65_002574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002574 DALFDA020000016.1 Protein Homology CDS 32042 32710 . + 0 ID=cds-HJH9172676.1;Parent=gene-O5C65_002574;Dbxref=NCBI_GP:HJH9172676.1;Name=HJH9172676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460566.1;locus_tag=O5C65_002574;product=DUF3313 domain-containing protein;protein_id=HJH9172676.1;transl_table=11 DALFDA020000016.1 tpg gene 32764 33942 . - . ID=gene-O5C65_002575;Name=O5C65_002575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002575 DALFDA020000016.1 Protein Homology CDS 32764 33942 . - 0 ID=cds-HJH9172677.1;Parent=gene-O5C65_002575;Dbxref=NCBI_GP:HJH9172677.1;Name=HJH9172677.1;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460565.1;locus_tag=O5C65_002575;product=benzoate/H(+) symporter BenE family transporter;protein_id=HJH9172677.1;transl_table=11 DALFDA020000016.1 tpg gene 34037 34573 . + . ID=gene-O5C65_002576;Name=O5C65_002576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002576 DALFDA020000016.1 Protein Homology CDS 34037 34573 . + 0 ID=cds-HJH9172678.1;Parent=gene-O5C65_002576;Dbxref=NCBI_GP:HJH9172678.1;Name=HJH9172678.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460564.1;locus_tag=O5C65_002576;product=helix-turn-helix domain-containing protein;protein_id=HJH9172678.1;transl_table=11 DALFDA020000016.1 tpg gene 34652 36616 . + . ID=gene-O5C65_002577;Name=O5C65_002577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002577 DALFDA020000016.1 Protein Homology CDS 34652 36616 . + 0 ID=cds-HJH9172679.1;Parent=gene-O5C65_002577;Dbxref=NCBI_GP:HJH9172679.1;Name=HJH9172679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460563.1;locus_tag=O5C65_002577;product=peptidase U32 family protein;protein_id=HJH9172679.1;transl_table=11 DALFDA020000016.1 tpg gene 36617 36847 . - . ID=gene-O5C65_002578;Name=O5C65_002578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002578 DALFDA020000016.1 Protein Homology CDS 36617 36847 . - 0 ID=cds-HJH9172680.1;Parent=gene-O5C65_002578;Dbxref=NCBI_GP:HJH9172680.1;Name=HJH9172680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460562.1;locus_tag=O5C65_002578;product=DUF2554 family protein;protein_id=HJH9172680.1;transl_table=11 DALFDA020000016.1 tpg gene 37119 38069 . - . ID=gene-O5C65_002579;Name=sifB;gbkey=Gene;gene=sifB;gene_biotype=protein_coding;locus_tag=O5C65_002579 DALFDA020000016.1 Protein Homology CDS 37119 38069 . - 0 ID=cds-HJH9172681.1;Parent=gene-O5C65_002579;Dbxref=NCBI_GP:HJH9172681.1;Name=HJH9172681.1;gbkey=CDS;gene=sifB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460561.1;locus_tag=O5C65_002579;product=SPI-2 type III secretion system effector SifB;protein_id=HJH9172681.1;transl_table=11 DALFDA020000016.1 tpg gene 38598 38996 . + . ID=gene-O5C65_002580;Name=O5C65_002580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002580 DALFDA020000016.1 Protein Homology CDS 38598 38996 . + 0 ID=cds-HJH9172682.1;Parent=gene-O5C65_002580;Dbxref=NCBI_GP:HJH9172682.1;Name=HJH9172682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460560.1;locus_tag=O5C65_002580;product=D-alanyl-D-alanine dipeptidase;protein_id=HJH9172682.1;transl_table=11 DALFDA020000016.1 tpg pseudogene 39029 39260 . + . ID=gene-O5C65_002581;Name=O5C65_002581;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_002581;pseudo=true DALFDA020000016.1 Protein Homology CDS 39029 39260 . + 0 ID=cds-O5C65_002581;Parent=gene-O5C65_002581;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448018.1;locus_tag=O5C65_002581;product=hypothetical protein;pseudo=true;transl_table=11 DALFDA020000016.1 tpg gene 39519 40289 . + . ID=gene-O5C65_002582;Name=O5C65_002582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002582 DALFDA020000016.1 Protein Homology CDS 39519 40289 . + 0 ID=cds-HJH9172683.1;Parent=gene-O5C65_002582;Dbxref=NCBI_GP:HJH9172683.1;Name=HJH9172683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460558.1;locus_tag=O5C65_002582;product=M15 family metallopeptidase;protein_id=HJH9172683.1;transl_table=11 DALFDA020000016.1 tpg gene 40425 41849 . + . ID=gene-O5C65_002583;Name=ycdR;gbkey=Gene;gene=ycdR;gene_biotype=protein_coding;locus_tag=O5C65_002583 DALFDA020000016.1 Protein Homology CDS 40425 41849 . + 0 ID=cds-HJH9172684.1;Parent=gene-O5C65_002583;Dbxref=NCBI_GP:HJH9172684.1;Name=HJH9172684.1;gbkey=CDS;gene=ycdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460557.1;locus_tag=O5C65_002583;product=GntR family transcriptional regulator YdcR;protein_id=HJH9172684.1;transl_table=11 DALFDA020000016.1 tpg gene 41964 43409 . + . ID=gene-O5C65_002584;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=O5C65_002584 DALFDA020000016.1 Protein Homology CDS 41964 43409 . + 0 ID=cds-HJH9172685.1;Parent=gene-O5C65_002584;Dbxref=NCBI_GP:HJH9172685.1;Name=HJH9172685.1;Ontology_term=GO:0009447,GO:0019145,GO:0051287;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase (NAD+) activity|0019145||IEA,NAD binding|0051287||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460556.3;locus_tag=O5C65_002584;product=aminobutyraldehyde dehydrogenase;protein_id=HJH9172685.1;transl_table=11 DALFDA020000016.1 tpg gene 43514 43609 . - . ID=gene-O5C65_002585;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=O5C65_002585 DALFDA020000016.1 Protein Homology CDS 43514 43609 . - 0 ID=cds-HJH9172686.1;Parent=gene-O5C65_002585;Dbxref=NCBI_GP:HJH9172686.1;Name=HJH9172686.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103198.1;locus_tag=O5C65_002585;product=stress response membrane protein YncL;protein_id=HJH9172686.1;transl_table=11 DALFDA020000016.1 tpg gene 43808 43981 . + . ID=gene-O5C65_002586;Name=O5C65_002586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002586 DALFDA020000016.1 Protein Homology CDS 43808 43981 . + 0 ID=cds-HJH9172687.1;Parent=gene-O5C65_002586;Dbxref=NCBI_GP:HJH9172687.1;Name=HJH9172687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=O5C65_002586;product=GhoT/OrtT family toxin;protein_id=HJH9172687.1;transl_table=11 DALFDA020000016.1 tpg gene 44026 46170 . - . ID=gene-O5C65_002587;Name=srfC;gbkey=Gene;gene=srfC;gene_biotype=protein_coding;locus_tag=O5C65_002587 DALFDA020000016.1 Protein Homology CDS 44026 46170 . - 0 ID=cds-HJH9172688.1;Parent=gene-O5C65_002587;Dbxref=NCBI_GP:HJH9172688.1;Name=HJH9172688.1;gbkey=CDS;gene=srfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460554.1;locus_tag=O5C65_002587;product=virulence-associated effector SrfC;protein_id=HJH9172688.1;transl_table=11 DALFDA020000016.1 tpg gene 46167 49148 . - . ID=gene-O5C65_002588;Name=O5C65_002588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002588 DALFDA020000016.1 Protein Homology CDS 46167 49148 . - 0 ID=cds-HJH9172689.1;Parent=gene-O5C65_002588;Dbxref=NCBI_GP:HJH9172689.1;Name=HJH9172689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=O5C65_002588;product=virulence factor SrfB;protein_id=HJH9172689.1;transl_table=11 DALFDA020000016.1 tpg gene 49153 50478 . - . ID=gene-O5C65_002589;Name=srfA;gbkey=Gene;gene=srfA;gene_biotype=protein_coding;locus_tag=O5C65_002589 DALFDA020000016.1 Protein Homology CDS 49153 50478 . - 0 ID=cds-HJH9172690.1;Parent=gene-O5C65_002589;Dbxref=NCBI_GP:HJH9172690.1;Name=HJH9172690.1;gbkey=CDS;gene=srfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460552.1;locus_tag=O5C65_002589;product=virulence-associated effector SrfA;protein_id=HJH9172690.1;transl_table=11 DALFDA020000016.1 tpg gene 50702 50935 . + . ID=gene-O5C65_002590;Name=O5C65_002590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002590 DALFDA020000016.1 Protein Homology CDS 50702 50935 . + 0 ID=cds-HJH9172691.1;Parent=gene-O5C65_002590;Dbxref=NCBI_GP:HJH9172691.1;Name=HJH9172691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460551.1;locus_tag=O5C65_002590;product=YdcY family protein;protein_id=HJH9172691.1;transl_table=11 DALFDA020000016.1 tpg gene 50940 51389 . - . ID=gene-O5C65_002591;Name=O5C65_002591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002591 DALFDA020000016.1 Protein Homology CDS 50940 51389 . - 0 ID=cds-HJH9172692.1;Parent=gene-O5C65_002591;Dbxref=NCBI_GP:HJH9172692.1;Name=HJH9172692.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460550.1;locus_tag=O5C65_002591;product=DMT family transporter;protein_id=HJH9172692.1;transl_table=11 DALFDA020000016.1 tpg gene 51389 51904 . - . ID=gene-O5C65_002592;Name=mddA;gbkey=Gene;gene=mddA;gene_biotype=protein_coding;locus_tag=O5C65_002592 DALFDA020000016.1 Protein Homology CDS 51389 51904 . - 0 ID=cds-HJH9172693.1;Parent=gene-O5C65_002592;Dbxref=NCBI_GP:HJH9172693.1;Name=HJH9172693.1;Note=Keep exception level- 87%25 similar to E. coli K12 P76112%2C different gene symbol;gbkey=CDS;gene=mddA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460549.1;locus_tag=O5C65_002592;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;protein_id=HJH9172693.1;transl_table=11 DALFDA020000016.1 tpg gene 52116 53153 . + . ID=gene-O5C65_002593;Name=O5C65_002593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002593 DALFDA020000016.1 Protein Homology CDS 52116 53153 . + 0 ID=cds-HJH9172694.1;Parent=gene-O5C65_002593;Dbxref=NCBI_GP:HJH9172694.1;Name=HJH9172694.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517827.1;locus_tag=O5C65_002593;product=NADP-dependent oxidoreductase;protein_id=HJH9172694.1;transl_table=11 DALFDA020000016.1 tpg gene 53487 54152 . + . ID=gene-O5C65_002594;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;locus_tag=O5C65_002594 DALFDA020000016.1 Protein Homology CDS 53487 54152 . + 0 ID=cds-HJH9172695.1;Parent=gene-O5C65_002594;Dbxref=NCBI_GP:HJH9172695.1;Name=HJH9172695.1;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460547.1;locus_tag=O5C65_002594;product=colanic acid/biofilm transcriptional regulator McbR;protein_id=HJH9172695.1;transl_table=11 DALFDA020000016.1 tpg gene 54208 56328 . - . ID=gene-O5C65_002595;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=protein_coding;locus_tag=O5C65_002595 DALFDA020000016.1 Protein Homology CDS 54208 56328 . - 0 ID=cds-HJH9172696.1;Parent=gene-O5C65_002595;Dbxref=NCBI_GP:HJH9172696.1;Name=HJH9172696.1;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460546.1;locus_tag=O5C65_002595;product=TonB-dependent receptor PqqU;protein_id=HJH9172696.1;transl_table=11 DALFDA020000016.1 tpg gene 56592 57653 . + . ID=gene-O5C65_002596;Name=O5C65_002596;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002596 DALFDA020000016.1 Protein Homology CDS 56592 57653 . + 0 ID=cds-HJH9172697.1;Parent=gene-O5C65_002596;Dbxref=NCBI_GP:HJH9172697.1;Name=HJH9172697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460545.1;locus_tag=O5C65_002596;product=YncE family protein;protein_id=HJH9172697.1;transl_table=11 DALFDA020000016.1 tpg gene 57798 58019 . + . ID=gene-O5C65_002597;Name=O5C65_002597;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002597 DALFDA020000016.1 Protein Homology CDS 57798 58019 . + 0 ID=cds-HJH9172698.1;Parent=gene-O5C65_002597;Dbxref=NCBI_GP:HJH9172698.1;Name=HJH9172698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460544.1;locus_tag=O5C65_002597;product=YgdI/YgdR family lipoprotein;protein_id=HJH9172698.1;transl_table=11 DALFDA020000016.1 tpg gene 58096 59589 . - . ID=gene-O5C65_002598;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=O5C65_002598 DALFDA020000016.1 Protein Homology CDS 58096 59589 . - 0 ID=cds-HJH9172699.1;Parent=gene-O5C65_002598;Dbxref=NCBI_GP:HJH9172699.1;Name=HJH9172699.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460543.1;locus_tag=O5C65_002598;product=L-asparagine permease;protein_id=HJH9172699.1;transl_table=11 DALFDA020000016.1 tpg gene 60101 60733 . + . ID=gene-O5C65_002599;Name=steA;gbkey=Gene;gene=steA;gene_biotype=protein_coding;locus_tag=O5C65_002599 DALFDA020000016.1 Protein Homology CDS 60101 60733 . + 0 ID=cds-HJH9172700.1;Parent=gene-O5C65_002599;Dbxref=NCBI_GP:HJH9172700.1;Name=HJH9172700.1;gbkey=CDS;gene=steA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460542.1;locus_tag=O5C65_002599;product=type III secretion system effector SteA;protein_id=HJH9172700.1;transl_table=11 DALFDA020000016.1 tpg gene 61017 61862 . + . ID=gene-O5C65_002600;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=O5C65_002600 DALFDA020000016.1 Protein Homology CDS 61017 61862 . + 0 ID=cds-HJH9172701.1;Parent=gene-O5C65_002600;Dbxref=NCBI_GP:HJH9172701.1;Name=HJH9172701.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460541.1;locus_tag=O5C65_002600;product=N-hydroxyarylamine O-acetyltransferase;protein_id=HJH9172701.1;transl_table=11 DALFDA020000016.1 tpg gene 61898 62791 . - . ID=gene-O5C65_002601;Name=O5C65_002601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002601 DALFDA020000016.1 Protein Homology CDS 61898 62791 . - 0 ID=cds-HJH9172702.1;Parent=gene-O5C65_002601;Dbxref=NCBI_GP:HJH9172702.1;Name=HJH9172702.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460540.1;locus_tag=O5C65_002601;product=PhzF family isomerase;protein_id=HJH9172702.1;transl_table=11 DALFDA020000016.1 tpg gene 62896 63576 . - . ID=gene-O5C65_002602;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=O5C65_002602 DALFDA020000016.1 Protein Homology CDS 62896 63576 . - 0 ID=cds-HJH9172703.1;Parent=gene-O5C65_002602;Dbxref=NCBI_GP:HJH9172703.1;Name=HJH9172703.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460539.1;locus_tag=O5C65_002602;product=respiratory nitrate reductase subunit gamma;protein_id=HJH9172703.1;transl_table=11 DALFDA020000016.1 tpg gene 63573 64268 . - . ID=gene-O5C65_002603;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=O5C65_002603 DALFDA020000016.1 Protein Homology CDS 63573 64268 . - 0 ID=cds-HJH9172704.1;Parent=gene-O5C65_002603;Dbxref=NCBI_GP:HJH9172704.1;Name=HJH9172704.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460538.1;locus_tag=O5C65_002603;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=HJH9172704.1;transl_table=11 DALFDA020000016.1 tpg gene 64268 65812 . - . ID=gene-O5C65_002604;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=O5C65_002604 DALFDA020000016.1 Protein Homology CDS 64268 65812 . - 0 ID=cds-HJH9172705.1;Parent=gene-O5C65_002604;Dbxref=NCBI_GP:HJH9172705.1;Name=HJH9172705.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460537.1;locus_tag=O5C65_002604;product=nitrate reductase subunit beta;protein_id=HJH9172705.1;transl_table=11 DALFDA020000016.1 tpg gene 65809 69549 . - . ID=gene-O5C65_002605;Name=O5C65_002605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002605 DALFDA020000016.1 Protein Homology CDS 65809 69549 . - 0 ID=cds-HJH9172706.1;Parent=gene-O5C65_002605;Dbxref=NCBI_GP:HJH9172706.1;Name=HJH9172706.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460536.1;locus_tag=O5C65_002605;product=nitrate reductase subunit alpha;protein_id=HJH9172706.1;transl_table=11 DALFDA020000016.1 tpg gene 69641 71029 . - . ID=gene-O5C65_002606;Name=O5C65_002606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002606 DALFDA020000016.1 Protein Homology CDS 69641 71029 . - 0 ID=cds-HJH9172707.1;Parent=gene-O5C65_002606;Dbxref=NCBI_GP:HJH9172707.1;Name=HJH9172707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460535.1;locus_tag=O5C65_002606;product=NarK family nitrate/nitrite MFS transporter;protein_id=HJH9172707.1;transl_table=11 DALFDA020000016.1 tpg gene 71243 71821 . - . ID=gene-O5C65_002607;Name=O5C65_002607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002607 DALFDA020000016.1 Protein Homology CDS 71243 71821 . - 0 ID=cds-HJH9172708.1;Parent=gene-O5C65_002607;Dbxref=NCBI_GP:HJH9172708.1;Name=HJH9172708.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460534.1;locus_tag=O5C65_002607;product=TetR family transcriptional regulator;protein_id=HJH9172708.1;transl_table=11 DALFDA020000016.1 tpg gene 71939 73426 . + . ID=gene-O5C65_002608;Name=smvA;gbkey=Gene;gene=smvA;gene_biotype=protein_coding;locus_tag=O5C65_002608 DALFDA020000016.1 Protein Homology CDS 71939 73426 . + 0 ID=cds-HJH9172709.1;Parent=gene-O5C65_002608;Dbxref=NCBI_GP:HJH9172709.1;Name=HJH9172709.1;gbkey=CDS;gene=smvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460533.1;locus_tag=O5C65_002608;product=methyl viologen efflux MFS transporter SmvA;protein_id=HJH9172709.1;transl_table=11 DALFDA020000016.1 tpg gene 73451 73831 . - . ID=gene-O5C65_002609;Name=O5C65_002609;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002609 DALFDA020000016.1 Protein Homology CDS 73451 73831 . - 0 ID=cds-HJH9172710.1;Parent=gene-O5C65_002609;Dbxref=NCBI_GP:HJH9172710.1;Name=HJH9172710.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460532.3;locus_tag=O5C65_002609;product=GFA family protein;protein_id=HJH9172710.1;transl_table=11 DALFDA020000016.1 tpg gene 73975 75063 . - . ID=gene-O5C65_002610;Name=ompD;gbkey=Gene;gene=ompD;gene_biotype=protein_coding;locus_tag=O5C65_002610 DALFDA020000016.1 Protein Homology CDS 73975 75063 . - 0 ID=cds-HJH9172711.1;Parent=gene-O5C65_002610;Dbxref=NCBI_GP:HJH9172711.1;Name=HJH9172711.1;gbkey=CDS;gene=ompD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460531.1;locus_tag=O5C65_002610;product=porin OmpD;protein_id=HJH9172711.1;transl_table=11 DALFDA020000016.1 tpg gene 75587 76468 . - . ID=gene-O5C65_002611;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=O5C65_002611 DALFDA020000016.1 Protein Homology CDS 75587 76468 . - 0 ID=cds-HJH9172712.1;Parent=gene-O5C65_002611;Dbxref=NCBI_GP:HJH9172712.1;Name=HJH9172712.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203799.1;locus_tag=O5C65_002611;product=aromatic amino acid efflux DMT transporter YddG;protein_id=HJH9172712.1;transl_table=11 DALFDA020000016.1 tpg gene 76746 79793 . + . ID=gene-O5C65_002612;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=O5C65_002612 DALFDA020000016.1 Protein Homology CDS 76746 79793 . + 0 ID=cds-HJH9172713.1;Parent=gene-O5C65_002612;Dbxref=NCBI_GP:HJH9172713.1;Name=HJH9172713.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=O5C65_002612;product=formate dehydrogenase-N subunit alpha;protein_id=HJH9172713.1;transl_except=(pos:77331..77333%2Caa:Sec);transl_table=11 DALFDA020000016.1 tpg gene 79807 80691 . + . ID=gene-O5C65_002613;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=O5C65_002613 DALFDA020000016.1 Protein Homology CDS 79807 80691 . + 0 ID=cds-HJH9172714.1;Parent=gene-O5C65_002613;Dbxref=NCBI_GP:HJH9172714.1;Name=HJH9172714.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460528.1;locus_tag=O5C65_002613;product=formate dehydrogenase subunit beta;protein_id=HJH9172714.1;transl_table=11 DALFDA020000016.1 tpg gene 80684 81340 . + . ID=gene-O5C65_002614;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=O5C65_002614 DALFDA020000016.1 Protein Homology CDS 80684 81340 . + 0 ID=cds-HJH9172715.1;Parent=gene-O5C65_002614;Dbxref=NCBI_GP:HJH9172715.1;Name=HJH9172715.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460527.1;locus_tag=O5C65_002614;product=formate dehydrogenase-N subunit gamma;protein_id=HJH9172715.1;transl_table=11 DALFDA020000016.1 tpg gene 81439 82449 . - . ID=gene-O5C65_002615;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=O5C65_002615 DALFDA020000016.1 Protein Homology CDS 81439 82449 . - 0 ID=cds-HJH9172716.1;Parent=gene-O5C65_002615;Dbxref=NCBI_GP:HJH9172716.1;Name=HJH9172716.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460526.1;locus_tag=O5C65_002615;product=alcohol dehydrogenase AdhP;protein_id=HJH9172716.1;transl_table=11 DALFDA020000016.1 tpg gene 82731 84428 . - . ID=gene-O5C65_002616;Name=O5C65_002616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002616 DALFDA020000016.1 Protein Homology CDS 82731 84428 . - 0 ID=cds-HJH9172717.1;Parent=gene-O5C65_002616;Dbxref=NCBI_GP:HJH9172717.1;Name=HJH9172717.1;Ontology_term=GO:0004470,GO:0004471,GO:0046872,GO:0051287;gbkey=CDS;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460525.1;locus_tag=O5C65_002616;product=NAD-dependent malic enzyme;protein_id=HJH9172717.1;transl_table=11 DALFDA020000016.1 tpg gene 84605 84748 . - . ID=gene-O5C65_002617;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=O5C65_002617 DALFDA020000016.1 Protein Homology CDS 84605 84748 . - 0 ID=cds-HJH9172718.1;Parent=gene-O5C65_002617;Dbxref=NCBI_GP:HJH9172718.1;Name=HJH9172718.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460524.1;locus_tag=O5C65_002617;product=stationary-phase-induced ribosome-associated protein;protein_id=HJH9172718.1;transl_table=11 DALFDA020000016.1 tpg gene 84843 85058 . - . ID=gene-O5C65_002618;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=O5C65_002618 DALFDA020000016.1 Protein Homology CDS 84843 85058 . - 0 ID=cds-HJH9172719.1;Parent=gene-O5C65_002618;Dbxref=NCBI_GP:HJH9172719.1;Name=HJH9172719.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460523.1;locus_tag=O5C65_002618;product=biofilm-dependent modulation protein;protein_id=HJH9172719.1;transl_table=11 DALFDA020000016.1 tpg gene 85570 86001 . + . ID=gene-O5C65_002619;Name=O5C65_002619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002619 DALFDA020000016.1 Protein Homology CDS 85570 86001 . + 0 ID=cds-HJH9172720.1;Parent=gene-O5C65_002619;Dbxref=NCBI_GP:HJH9172720.1;Name=HJH9172720.1;Ontology_term=GO:0006972,GO:0006979,GO:0033194,GO:0004601,GO:0051920,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=peroxidase activity|0004601||IEA,peroxiredoxin activity|0051920||IEA;go_process=hyperosmotic response|0006972||IEA,response to oxidative stress|0006979||IEA,response to hydroperoxide|0033194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460522.1;locus_tag=O5C65_002619;product=OsmC family protein;protein_id=HJH9172720.1;transl_table=11 DALFDA020000016.1 tpg gene 86351 86680 . + . ID=gene-O5C65_002620;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=O5C65_002620 DALFDA020000016.1 Protein Homology CDS 86351 86680 . + 0 ID=cds-HJH9172721.1;Parent=gene-O5C65_002620;Dbxref=NCBI_GP:HJH9172721.1;Name=HJH9172721.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460521.1;locus_tag=O5C65_002620;product=acid-activated periplasmic chaperone HdeB;protein_id=HJH9172721.1;transl_table=11 DALFDA020000016.1 tpg gene 86823 87608 . + . ID=gene-O5C65_002621;Name=O5C65_002621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002621 DALFDA020000016.1 Protein Homology CDS 86823 87608 . + 0 ID=cds-HJH9172722.1;Parent=gene-O5C65_002621;Dbxref=NCBI_GP:HJH9172722.1;Name=HJH9172722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460520.1;locus_tag=O5C65_002621;product=OBAP family protein;protein_id=HJH9172722.1;transl_table=11 DALFDA020000016.1 tpg gene 87737 89521 . + . ID=gene-O5C65_002622;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=O5C65_002622 DALFDA020000016.1 Protein Homology CDS 87737 89521 . + 0 ID=cds-HJH9172723.1;Parent=gene-O5C65_002622;Dbxref=NCBI_GP:HJH9172723.1;Name=HJH9172723.1;Ontology_term=GO:0005992,GO:0033942;gbkey=CDS;gene=treZ;go_function=4-alpha-D-(1->4)-alpha-D-glucanotrehalose trehalohydrolase activity|0033942||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460519.1;locus_tag=O5C65_002622;product=malto-oligosyltrehalose trehalohydrolase;protein_id=HJH9172723.1;transl_table=11 DALFDA020000016.1 tpg pseudogene 89518 92042 . + . ID=gene-O5C65_002623;Name=treY;gbkey=Gene;gene=treY;gene_biotype=pseudogene;locus_tag=O5C65_002623;pseudo=true DALFDA020000016.1 Protein Homology CDS 89518 92042 . + 0 ID=cds-O5C65_002623;Parent=gene-O5C65_002623;Note=frameshifted;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460518.1;locus_tag=O5C65_002623;product=malto-oligosyltrehalose synthase;pseudo=true;transl_table=11 DALFDA020000016.1 tpg gene 92099 94174 . + . ID=gene-O5C65_002624;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=O5C65_002624 DALFDA020000016.1 Protein Homology CDS 92099 94174 . + 0 ID=cds-HJH9172724.1;Parent=gene-O5C65_002624;Dbxref=NCBI_GP:HJH9172724.1;Name=HJH9172724.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460517.1;locus_tag=O5C65_002624;product=glycogen debranching protein GlgX;protein_id=HJH9172724.1;transl_table=11 DALFDA020000016.1 tpg gene 94288 95490 . - . ID=gene-O5C65_002625;Name=O5C65_002625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002625 DALFDA020000016.1 Protein Homology CDS 94288 95490 . - 0 ID=cds-HJH9172725.1;Parent=gene-O5C65_002625;Dbxref=NCBI_GP:HJH9172725.1;Name=HJH9172725.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460516.1;locus_tag=O5C65_002625;product=MalY/PatB family protein;protein_id=HJH9172725.1;transl_table=11 DALFDA020000016.1 tpg gene 95503 96954 . - . ID=gene-O5C65_002626;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=O5C65_002626 DALFDA020000016.1 Protein Homology CDS 95503 96954 . - 0 ID=cds-HJH9172726.1;Parent=gene-O5C65_002626;Dbxref=NCBI_GP:HJH9172726.1;Name=HJH9172726.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460515.1;locus_tag=O5C65_002626;product=Na+/H+ antiporter NhaC;protein_id=HJH9172726.1;transl_table=11 DALFDA020000016.1 tpg gene 97098 98105 . - . ID=gene-O5C65_002627;Name=O5C65_002627;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002627 DALFDA020000016.1 Protein Homology CDS 97098 98105 . - 0 ID=cds-HJH9172727.1;Parent=gene-O5C65_002627;Dbxref=NCBI_GP:HJH9172727.1;Name=HJH9172727.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460514.1;locus_tag=O5C65_002627;product=LacI family DNA-binding transcriptional regulator;protein_id=HJH9172727.1;transl_table=11 DALFDA020000016.1 tpg gene 98363 99829 . + . ID=gene-O5C65_002628;Name=O5C65_002628;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002628 DALFDA020000016.1 Protein Homology CDS 98363 99829 . + 0 ID=cds-HJH9172728.1;Parent=gene-O5C65_002628;Dbxref=NCBI_GP:HJH9172728.1;Name=HJH9172728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460513.1;locus_tag=O5C65_002628;product=hypothetical protein;protein_id=HJH9172728.1;transl_table=11 DALFDA020000016.1 tpg gene 100131 100412 . + . ID=gene-O5C65_002629;Name=O5C65_002629;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002629 DALFDA020000016.1 Protein Homology CDS 100131 100412 . + 0 ID=cds-HJH9172729.1;Parent=gene-O5C65_002629;Dbxref=NCBI_GP:HJH9172729.1;Name=HJH9172729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000742002.1;locus_tag=O5C65_002629;product=hypothetical protein;protein_id=HJH9172729.1;transl_table=11 DALFDA020000016.1 tpg gene 100701 101033 . - . ID=gene-O5C65_002630;Name=O5C65_002630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002630 DALFDA020000016.1 Protein Homology CDS 100701 101033 . - 0 ID=cds-HJH9172730.1;Parent=gene-O5C65_002630;Dbxref=NCBI_GP:HJH9172730.1;Name=HJH9172730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253166.1;locus_tag=O5C65_002630;product=DUF1493 family protein;protein_id=HJH9172730.1;transl_table=11 DALFDA020000016.1 tpg pseudogene 101027 101125 . - . ID=gene-O5C65_002631;Name=O5C65_002631;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_002631;pseudo=true DALFDA020000016.1 Protein Homology CDS 101027 101125 . - 0 ID=cds-O5C65_002631;Parent=gene-O5C65_002631;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_090138499.1;locus_tag=O5C65_002631;product=STM2901 family protein;pseudo=true;transl_table=11 DALFDA020000016.1 tpg pseudogene 101119 101238 . - . ID=gene-O5C65_002632;Name=O5C65_002632;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_002632;pseudo=true DALFDA020000016.1 Protein Homology CDS 101119 101238 . - 0 ID=cds-O5C65_002632;Parent=gene-O5C65_002632;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001388363.1;locus_tag=O5C65_002632;product=type II secretion system protein GspD;pseudo=true;transl_table=11 DALFDA020000016.1 tpg gene 101390 101638 . + . ID=gene-O5C65_002633;Name=O5C65_002633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002633 DALFDA020000016.1 Protein Homology CDS 101390 101638 . + 0 ID=cds-HJH9172731.1;Parent=gene-O5C65_002633;Dbxref=NCBI_GP:HJH9172731.1;Name=HJH9172731.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460511.1;locus_tag=O5C65_002633;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=HJH9172731.1;transl_table=11 DALFDA020000016.1 tpg gene 101628 101912 . + . ID=gene-O5C65_002634;Name=O5C65_002634;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002634 DALFDA020000016.1 Protein Homology CDS 101628 101912 . + 0 ID=cds-HJH9172732.1;Parent=gene-O5C65_002634;Dbxref=NCBI_GP:HJH9172732.1;Name=HJH9172732.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460510.1;locus_tag=O5C65_002634;product=type II toxin-antitoxin system RelE family toxin;protein_id=HJH9172732.1;transl_table=11 DALFDA020000016.1 tpg gene 102083 102472 . + . ID=gene-O5C65_002635;Name=O5C65_002635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002635 DALFDA020000016.1 Protein Homology CDS 102083 102472 . + 0 ID=cds-HJH9172733.1;Parent=gene-O5C65_002635;Dbxref=NCBI_GP:HJH9172733.1;Name=HJH9172733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460509.1;locus_tag=O5C65_002635;product=RidA family protein;protein_id=HJH9172733.1;transl_table=11 DALFDA020000016.1 tpg gene 102520 103599 . - . ID=gene-O5C65_002636;Name=O5C65_002636;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002636 DALFDA020000016.1 Protein Homology CDS 102520 103599 . - 0 ID=cds-HJH9172734.1;Parent=gene-O5C65_002636;Dbxref=NCBI_GP:HJH9172734.1;Name=HJH9172734.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000954687.1;locus_tag=O5C65_002636;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=HJH9172734.1;transl_table=11 DALFDA020000016.1 tpg gene 103792 104280 . - . ID=gene-O5C65_002637;Name=O5C65_002637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002637 DALFDA020000016.1 Protein Homology CDS 103792 104280 . - 0 ID=cds-HJH9172735.1;Parent=gene-O5C65_002637;Dbxref=NCBI_GP:HJH9172735.1;Name=HJH9172735.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460507.1;locus_tag=O5C65_002637;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=HJH9172735.1;transl_table=11 DALFDA020000016.1 tpg gene 104325 105833 . + . ID=gene-O5C65_002638;Name=O5C65_002638;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002638 DALFDA020000016.1 Protein Homology CDS 104325 105833 . + 0 ID=cds-HJH9172736.1;Parent=gene-O5C65_002638;Dbxref=NCBI_GP:HJH9172736.1;Name=HJH9172736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460506.1;locus_tag=O5C65_002638;product=FAD-dependent oxidoreductase;protein_id=HJH9172736.1;transl_table=11 DALFDA020000016.1 tpg gene 105823 107064 . + . ID=gene-O5C65_002639;Name=O5C65_002639;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002639 DALFDA020000016.1 Protein Homology CDS 105823 107064 . + 0 ID=cds-HJH9172737.1;Parent=gene-O5C65_002639;Dbxref=NCBI_GP:HJH9172737.1;Name=HJH9172737.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460505.1;locus_tag=O5C65_002639;product=MFS transporter;protein_id=HJH9172737.1;transl_table=11 DALFDA020000016.1 tpg gene 107134 108690 . + . ID=gene-O5C65_002640;Name=O5C65_002640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002640 DALFDA020000016.1 Protein Homology CDS 107134 108690 . + 0 ID=cds-HJH9172738.1;Parent=gene-O5C65_002640;Dbxref=NCBI_GP:HJH9172738.1;Name=HJH9172738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460504.1;locus_tag=O5C65_002640;product=PhoPQ-activated pathogenicity-related family protein;protein_id=HJH9172738.1;transl_table=11 DALFDA020000016.1 tpg gene 108867 110153 . + . ID=gene-O5C65_002641;Name=O5C65_002641;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002641 DALFDA020000016.1 Protein Homology CDS 108867 110153 . + 0 ID=cds-HJH9172739.1;Parent=gene-O5C65_002641;Dbxref=NCBI_GP:HJH9172739.1;Name=HJH9172739.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460503.1;locus_tag=O5C65_002641;product=MFS transporter;protein_id=HJH9172739.1;transl_table=11 DALFDA020000016.1 tpg gene 110128 111153 . + . ID=gene-O5C65_002642;Name=O5C65_002642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002642 DALFDA020000016.1 Protein Homology CDS 110128 111153 . + 0 ID=cds-HJH9172740.1;Parent=gene-O5C65_002642;Dbxref=NCBI_GP:HJH9172740.1;Name=HJH9172740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460502.1;locus_tag=O5C65_002642;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=HJH9172740.1;transl_table=11 DALFDA020000016.1 tpg gene 111212 112003 . - . ID=gene-O5C65_002643;Name=O5C65_002643;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002643 DALFDA020000016.1 Protein Homology CDS 111212 112003 . - 0 ID=cds-HJH9172741.1;Parent=gene-O5C65_002643;Dbxref=NCBI_GP:HJH9172741.1;Name=HJH9172741.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460501.1;locus_tag=O5C65_002643;product=FadR/GntR family transcriptional regulator;protein_id=HJH9172741.1;transl_table=11 DALFDA020000016.1 tpg gene 112049 113140 . - . ID=gene-O5C65_002644;Name=O5C65_002644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002644 DALFDA020000016.1 Protein Homology CDS 112049 113140 . - 0 ID=cds-HJH9172742.1;Parent=gene-O5C65_002644;Dbxref=NCBI_GP:HJH9172742.1;Name=HJH9172742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460500.1;locus_tag=O5C65_002644;product=choloylglycine hydrolase family protein;protein_id=HJH9172742.1;transl_table=11 DALFDA020000016.1 tpg gene 113558 114661 . + . ID=gene-O5C65_002645;Name=O5C65_002645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002645 DALFDA020000016.1 Protein Homology CDS 113558 114661 . + 0 ID=cds-HJH9172743.1;Parent=gene-O5C65_002645;Dbxref=NCBI_GP:HJH9172743.1;Name=HJH9172743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460499.1;locus_tag=O5C65_002645;product=hydrogenase small subunit;protein_id=HJH9172743.1;transl_table=11 DALFDA020000016.1 tpg gene 114664 116466 . + . ID=gene-O5C65_002646;Name=O5C65_002646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002646 DALFDA020000016.1 Protein Homology CDS 114664 116466 . + 0 ID=cds-HJH9172744.1;Parent=gene-O5C65_002646;Dbxref=NCBI_GP:HJH9172744.1;Name=HJH9172744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460498.1;locus_tag=O5C65_002646;product=nickel-dependent hydrogenase large subunit;protein_id=HJH9172744.1;transl_table=11 DALFDA020000016.1 tpg gene 116417 117160 . + . ID=gene-O5C65_002647;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=O5C65_002647 DALFDA020000016.1 Protein Homology CDS 116417 117160 . + 0 ID=cds-HJH9172745.1;Parent=gene-O5C65_002647;Dbxref=NCBI_GP:HJH9172745.1;Name=HJH9172745.1;Ontology_term=GO:0022904,GO:0005506,GO:0009055,GO:0016020;gbkey=CDS;gene=cybH;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460497.1;locus_tag=O5C65_002647;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=HJH9172745.1;transl_table=11 DALFDA020000016.1 tpg gene 117166 117774 . + . ID=gene-O5C65_002648;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=O5C65_002648 DALFDA020000016.1 Protein Homology CDS 117166 117774 . + 0 ID=cds-HJH9172746.1;Parent=gene-O5C65_002648;Dbxref=NCBI_GP:HJH9172746.1;Name=HJH9172746.1;Ontology_term=GO:0051604,GO:0004190,GO:0046872,GO:0009375;gbkey=CDS;gene=hybD;go_component=ferredoxin hydrogenase complex|0009375||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA,metal ion binding|0046872||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460496.1;locus_tag=O5C65_002648;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=HJH9172746.1;transl_table=11 DALFDA020000016.1 tpg gene 117774 118073 . + . ID=gene-O5C65_002649;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=O5C65_002649 DALFDA020000016.1 Protein Homology CDS 117774 118073 . + 0 ID=cds-HJH9172747.1;Parent=gene-O5C65_002649;Dbxref=NCBI_GP:HJH9172747.1;Name=HJH9172747.1;Ontology_term=GO:0065003,GO:0016530,GO:0051082;gbkey=CDS;gene=hypC;go_function=metallochaperone activity|0016530||IEA,unfolded protein binding|0051082||IEA;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460495.1;locus_tag=O5C65_002649;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=HJH9172747.1;transl_table=11 DALFDA020000016.1 tpg gene 118070 118480 . + . ID=gene-O5C65_002650;Name=O5C65_002650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002650 DALFDA020000016.1 Protein Homology CDS 118070 118480 . + 0 ID=cds-HJH9172748.1;Parent=gene-O5C65_002650;Dbxref=NCBI_GP:HJH9172748.1;Name=HJH9172748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460494.1;locus_tag=O5C65_002650;product=hydrogenase;protein_id=HJH9172748.1;transl_table=11 DALFDA020000016.1 tpg gene 118498 119559 . + . ID=gene-O5C65_002651;Name=O5C65_002651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002651 DALFDA020000016.1 Protein Homology CDS 118498 119559 . + 0 ID=cds-HJH9172749.1;Parent=gene-O5C65_002651;Dbxref=NCBI_GP:HJH9172749.1;Name=HJH9172749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460493.1;locus_tag=O5C65_002651;product=hydrogenase expression/formation C-terminal domain-containing protein;protein_id=HJH9172749.1;transl_table=11 DALFDA020000016.1 tpg gene 119547 120434 . + . ID=gene-O5C65_002652;Name=O5C65_002652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002652 DALFDA020000016.1 Protein Homology CDS 119547 120434 . + 0 ID=cds-HJH9172750.1;Parent=gene-O5C65_002652;Dbxref=NCBI_GP:HJH9172750.1;Name=HJH9172750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460492.1;locus_tag=O5C65_002652;product=ATP/GTP-binding protein;protein_id=HJH9172750.1;transl_table=11 DALFDA020000016.1 tpg gene 120447 120788 . + . ID=gene-O5C65_002653;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=O5C65_002653 DALFDA020000016.1 Protein Homology CDS 120447 120788 . + 0 ID=cds-HJH9172751.1;Parent=gene-O5C65_002653;Dbxref=NCBI_GP:HJH9172751.1;Name=HJH9172751.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460491.1;locus_tag=O5C65_002653;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=HJH9172751.1;transl_table=11 DALFDA020000016.1 tpg gene 120929 122047 . - . ID=gene-O5C65_002654;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=O5C65_002654 DALFDA020000016.1 Protein Homology CDS 120929 122047 . - 0 ID=cds-HJH9172752.1;Parent=gene-O5C65_002654;Dbxref=NCBI_GP:HJH9172752.1;Name=HJH9172752.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460490.1;locus_tag=O5C65_002654;product=porin OmpC;protein_id=HJH9172752.1;transl_table=11 DALFDA020000016.1 tpg gene 122764 123306 . + . ID=gene-O5C65_002655;Name=O5C65_002655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002655 DALFDA020000016.1 Protein Homology CDS 122764 123306 . + 0 ID=cds-HJH9172753.1;Parent=gene-O5C65_002655;Dbxref=NCBI_GP:HJH9172753.1;Name=HJH9172753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460488.1;locus_tag=O5C65_002655;product=YybH family protein;protein_id=HJH9172753.1;transl_table=11 DALFDA020000016.1 tpg gene 123362 124276 . - . ID=gene-O5C65_002656;Name=O5C65_002656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002656 DALFDA020000016.1 Protein Homology CDS 123362 124276 . - 0 ID=cds-HJH9172754.1;Parent=gene-O5C65_002656;Dbxref=NCBI_GP:HJH9172754.1;Name=HJH9172754.1;Ontology_term=GO:0005254;gbkey=CDS;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=O5C65_002656;product=bestrophin family protein;protein_id=HJH9172754.1;transl_table=11 DALFDA020000016.1 tpg gene 124532 124891 . - . ID=gene-O5C65_002657;Name=O5C65_002657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002657 DALFDA020000016.1 Protein Homology CDS 124532 124891 . - 0 ID=cds-HJH9172755.1;Parent=gene-O5C65_002657;Dbxref=NCBI_GP:HJH9172755.1;Name=HJH9172755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460486.1;locus_tag=O5C65_002657;product=DUF4186 domain-containing protein;protein_id=HJH9172755.1;transl_table=11 DALFDA020000016.1 tpg gene 124891 125817 . - . ID=gene-O5C65_002658;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=O5C65_002658 DALFDA020000016.1 Protein Homology CDS 124891 125817 . - 0 ID=cds-HJH9172756.1;Parent=gene-O5C65_002658;Dbxref=NCBI_GP:HJH9172756.1;Name=HJH9172756.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460485.1;locus_tag=O5C65_002658;product=glutaminase B;protein_id=HJH9172756.1;transl_table=11 DALFDA020000016.1 tpg gene 125890 126247 . - . ID=gene-O5C65_002659;Name=O5C65_002659;end_range=126247,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002659;partial=true DALFDA020000016.1 Protein Homology CDS 125890 126247 . - 1 ID=cds-HJH9172757.1;Parent=gene-O5C65_002659;Dbxref=NCBI_GP:HJH9172757.1;Name=HJH9172757.1;Ontology_term=GO:0016491;end_range=126247,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460484.1;locus_tag=O5C65_002659;partial=true;product=aldehyde dehydrogenase family protein;protein_id=HJH9172757.1;transl_table=11 ##sequence-region DALFDA020000017.1 1 119689 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000017.1 tpg region 1 119689 . + . ID=DALFDA020000017.1:1..119689;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000017.1 tpg gene 1 416 . - . ID=gene-O5C65_002660;Name=O5C65_002660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002660;partial=true;start_range=.,1 DALFDA020000017.1 Protein Homology CDS 1 416 . - 0 ID=cds-HJH9172758.1;Parent=gene-O5C65_002660;Dbxref=NCBI_GP:HJH9172758.1;Name=HJH9172758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000159517.1;locus_tag=O5C65_002660;partial=true;product=DUF7666 domain-containing protein;protein_id=HJH9172758.1;start_range=.,1;transl_table=11 DALFDA020000017.1 tpg gene 500 694 . - . ID=gene-O5C65_002661;Name=O5C65_002661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002661 DALFDA020000017.1 Protein Homology CDS 500 694 . - 0 ID=cds-HJH9172759.1;Parent=gene-O5C65_002661;Dbxref=NCBI_GP:HJH9172759.1;Name=HJH9172759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213981.1;locus_tag=O5C65_002661;product=antirestriction Ral family protein;protein_id=HJH9172759.1;transl_table=11 DALFDA020000017.1 tpg gene 727 1059 . - . ID=gene-O5C65_002662;Name=O5C65_002662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002662 DALFDA020000017.1 Protein Homology CDS 727 1059 . - 0 ID=cds-HJH9172760.1;Parent=gene-O5C65_002662;Dbxref=NCBI_GP:HJH9172760.1;Name=HJH9172760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001296860.1;locus_tag=O5C65_002662;product=antitermination protein N;protein_id=HJH9172760.1;transl_table=11 DALFDA020000017.1 tpg gene 1650 2282 . - . ID=gene-O5C65_002663;Name=O5C65_002663;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002663 DALFDA020000017.1 Protein Homology CDS 1650 2282 . - 0 ID=cds-HJH9172761.1;Parent=gene-O5C65_002663;Dbxref=NCBI_GP:HJH9172761.1;Name=HJH9172761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704102.1;locus_tag=O5C65_002663;product=helix-turn-helix domain-containing protein;protein_id=HJH9172761.1;transl_table=11 DALFDA020000017.1 tpg gene 2383 2598 . + . ID=gene-O5C65_002664;Name=O5C65_002664;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002664 DALFDA020000017.1 Protein Homology CDS 2383 2598 . + 0 ID=cds-HJH9172762.1;Parent=gene-O5C65_002664;Dbxref=NCBI_GP:HJH9172762.1;Name=HJH9172762.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001194218.1;locus_tag=O5C65_002664;product=helix-turn-helix domain-containing protein;protein_id=HJH9172762.1;transl_table=11 DALFDA020000017.1 tpg gene 2720 2998 . + . ID=gene-O5C65_002665;Name=O5C65_002665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002665 DALFDA020000017.1 Protein Homology CDS 2720 2998 . + 0 ID=cds-HJH9172763.1;Parent=gene-O5C65_002665;Dbxref=NCBI_GP:HJH9172763.1;Name=HJH9172763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706465.1;locus_tag=O5C65_002665;product=lambda phage CII family protein;protein_id=HJH9172763.1;transl_table=11 DALFDA020000017.1 tpg gene 3037 3180 . + . ID=gene-O5C65_002666;Name=O5C65_002666;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002666 DALFDA020000017.1 GeneMarkS-2+ CDS 3037 3180 . + 0 ID=cds-HJH9172764.1;Parent=gene-O5C65_002666;Dbxref=NCBI_GP:HJH9172764.1;Name=HJH9172764.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_002666;product=hypothetical protein;protein_id=HJH9172764.1;transl_table=11 DALFDA020000017.1 tpg gene 3177 4025 . + . ID=gene-O5C65_002667;Name=O5C65_002667;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002667 DALFDA020000017.1 Protein Homology CDS 3177 4025 . + 0 ID=cds-HJH9172765.1;Parent=gene-O5C65_002667;Dbxref=NCBI_GP:HJH9172765.1;Name=HJH9172765.1;Ontology_term=GO:0006260;gbkey=CDS;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015995303.1;locus_tag=O5C65_002667;product=replication protein;protein_id=HJH9172765.1;transl_table=11 DALFDA020000017.1 tpg gene 4133 6013 . + . ID=gene-O5C65_002668;Name=O5C65_002668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002668 DALFDA020000017.1 Protein Homology CDS 4133 6013 . + 0 ID=cds-HJH9172766.1;Parent=gene-O5C65_002668;Dbxref=NCBI_GP:HJH9172766.1;Name=HJH9172766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001322819.1;locus_tag=O5C65_002668;product=toprim domain-containing protein;protein_id=HJH9172766.1;transl_table=11 DALFDA020000017.1 tpg gene 6089 6361 . + . ID=gene-O5C65_002669;Name=O5C65_002669;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002669 DALFDA020000017.1 Protein Homology CDS 6089 6361 . + 0 ID=cds-HJH9172767.1;Parent=gene-O5C65_002669;Dbxref=NCBI_GP:HJH9172767.1;Name=HJH9172767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000654041.1;locus_tag=O5C65_002669;product=DUF4752 family protein;protein_id=HJH9172767.1;transl_table=11 DALFDA020000017.1 tpg gene 6374 6580 . + . ID=gene-O5C65_002670;Name=O5C65_002670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002670 DALFDA020000017.1 Protein Homology CDS 6374 6580 . + 0 ID=cds-HJH9172768.1;Parent=gene-O5C65_002670;Dbxref=NCBI_GP:HJH9172768.1;Name=HJH9172768.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048696.1;locus_tag=O5C65_002670;product=DUF7301 family protein;protein_id=HJH9172768.1;transl_table=11 DALFDA020000017.1 tpg gene 6592 6858 . + . ID=gene-O5C65_002671;Name=O5C65_002671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002671 DALFDA020000017.1 Protein Homology CDS 6592 6858 . + 0 ID=cds-HJH9172769.1;Parent=gene-O5C65_002671;Dbxref=NCBI_GP:HJH9172769.1;Name=HJH9172769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000344564.1;locus_tag=O5C65_002671;product=hypothetical protein;protein_id=HJH9172769.1;transl_table=11 DALFDA020000017.1 tpg gene 6861 7271 . + . ID=gene-O5C65_002672;Name=O5C65_002672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002672 DALFDA020000017.1 Protein Homology CDS 6861 7271 . + 0 ID=cds-HJH9172770.1;Parent=gene-O5C65_002672;Dbxref=NCBI_GP:HJH9172770.1;Name=HJH9172770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966857.1;locus_tag=O5C65_002672;product=recombination protein NinB;protein_id=HJH9172770.1;transl_table=11 DALFDA020000017.1 tpg gene 7268 7444 . + . ID=gene-O5C65_002673;Name=O5C65_002673;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002673 DALFDA020000017.1 Protein Homology CDS 7268 7444 . + 0 ID=cds-HJH9172771.1;Parent=gene-O5C65_002673;Dbxref=NCBI_GP:HJH9172771.1;Name=HJH9172771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311007.1;locus_tag=O5C65_002673;product=NinE family protein;protein_id=HJH9172771.1;transl_table=11 DALFDA020000017.1 tpg gene 7447 7809 . + . ID=gene-O5C65_002674;Name=O5C65_002674;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002674 DALFDA020000017.1 Protein Homology CDS 7447 7809 . + 0 ID=cds-HJH9172772.1;Parent=gene-O5C65_002674;Dbxref=NCBI_GP:HJH9172772.1;Name=HJH9172772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001617188.1;locus_tag=O5C65_002674;product=phage protein NinX family protein;protein_id=HJH9172772.1;transl_table=11 DALFDA020000017.1 tpg gene 7802 7978 . + . ID=gene-O5C65_002675;Name=O5C65_002675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002675 DALFDA020000017.1 Protein Homology CDS 7802 7978 . + 0 ID=cds-HJH9172773.1;Parent=gene-O5C65_002675;Dbxref=NCBI_GP:HJH9172773.1;Name=HJH9172773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000950944.1;locus_tag=O5C65_002675;product=protein NinF;protein_id=HJH9172773.1;transl_table=11 DALFDA020000017.1 tpg gene 7971 8537 . + . ID=gene-O5C65_002676;Name=O5C65_002676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002676 DALFDA020000017.1 Protein Homology CDS 7971 8537 . + 0 ID=cds-HJH9172774.1;Parent=gene-O5C65_002676;Dbxref=NCBI_GP:HJH9172774.1;Name=HJH9172774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311531.1;locus_tag=O5C65_002676;product=HNH endonuclease;protein_id=HJH9172774.1;transl_table=11 DALFDA020000017.1 tpg gene 8512 9114 . + . ID=gene-O5C65_002677;Name=O5C65_002677;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002677 DALFDA020000017.1 Protein Homology CDS 8512 9114 . + 0 ID=cds-HJH9172775.1;Parent=gene-O5C65_002677;Dbxref=NCBI_GP:HJH9172775.1;Name=HJH9172775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311530.1;locus_tag=O5C65_002677;product=recombination protein NinG;protein_id=HJH9172775.1;transl_table=11 DALFDA020000017.1 tpg gene 9111 9314 . + . ID=gene-O5C65_002678;Name=O5C65_002678;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002678 DALFDA020000017.1 Protein Homology CDS 9111 9314 . + 0 ID=cds-HJH9172776.1;Parent=gene-O5C65_002678;Dbxref=NCBI_GP:HJH9172776.1;Name=HJH9172776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000149880.1;locus_tag=O5C65_002678;product=protein ninH;protein_id=HJH9172776.1;transl_table=11 DALFDA020000017.1 tpg gene 9295 9474 . + . ID=gene-O5C65_002679;Name=O5C65_002679;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002679 DALFDA020000017.1 Protein Homology CDS 9295 9474 . + 0 ID=cds-HJH9172777.1;Parent=gene-O5C65_002679;Dbxref=NCBI_GP:HJH9172777.1;Name=HJH9172777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016048830.1;locus_tag=O5C65_002679;product=hypothetical protein;protein_id=HJH9172777.1;transl_table=11 DALFDA020000017.1 tpg gene 9471 9989 . + . ID=gene-O5C65_002680;Name=O5C65_002680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002680 DALFDA020000017.1 Protein Homology CDS 9471 9989 . + 0 ID=cds-HJH9172778.1;Parent=gene-O5C65_002680;Dbxref=NCBI_GP:HJH9172778.1;Name=HJH9172778.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015973887.1;locus_tag=O5C65_002680;product=antiterminator Q family protein;protein_id=HJH9172778.1;transl_table=11 DALFDA020000017.1 tpg gene 10054 10128 . + . ID=gene-O5C65_002681;Name=O5C65_002681;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_002681 DALFDA020000017.1 tRNAscan-SE tRNA 10054 10128 . + . ID=rna-O5C65_002681;Parent=gene-O5C65_002681;anticodon=(pos:10087..10089);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_002681;product=tRNA-Asn DALFDA020000017.1 tRNAscan-SE exon 10054 10128 . + . ID=exon-O5C65_002681-1;Parent=rna-O5C65_002681;anticodon=(pos:10087..10089);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_002681;product=tRNA-Asn DALFDA020000017.1 tpg gene 10134 10209 . + . ID=gene-O5C65_002682;Name=O5C65_002682;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_002682 DALFDA020000017.1 tRNAscan-SE tRNA 10134 10209 . + . ID=rna-O5C65_002682;Parent=gene-O5C65_002682;anticodon=(pos:10167..10169);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_002682;product=tRNA-Thr DALFDA020000017.1 tRNAscan-SE exon 10134 10209 . + . ID=exon-O5C65_002682-1;Parent=rna-O5C65_002682;anticodon=(pos:10167..10169);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_002682;product=tRNA-Thr DALFDA020000017.1 tpg gene 10454 10657 . + . ID=gene-O5C65_002683;Name=O5C65_002683;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002683 DALFDA020000017.1 Protein Homology CDS 10454 10657 . + 0 ID=cds-HJH9172779.1;Parent=gene-O5C65_002683;Dbxref=NCBI_GP:HJH9172779.1;Name=HJH9172779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000286100.1;locus_tag=O5C65_002683;product=phage holin family protein;protein_id=HJH9172779.1;transl_table=11 DALFDA020000017.1 tpg gene 10635 11132 . + . ID=gene-O5C65_002684;Name=O5C65_002684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002684 DALFDA020000017.1 Protein Homology CDS 10635 11132 . + 0 ID=cds-HJH9172780.1;Parent=gene-O5C65_002684;Dbxref=NCBI_GP:HJH9172780.1;Name=HJH9172780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415087.1;locus_tag=O5C65_002684;product=lysozyme;protein_id=HJH9172780.1;transl_table=11 DALFDA020000017.1 tpg gene 11221 11658 . + . ID=gene-O5C65_002685;Name=O5C65_002685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002685 DALFDA020000017.1 Protein Homology CDS 11221 11658 . + 0 ID=cds-HJH9172781.1;Parent=gene-O5C65_002685;Dbxref=NCBI_GP:HJH9172781.1;Name=HJH9172781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009453323.1;locus_tag=O5C65_002685;product=lysis protein;protein_id=HJH9172781.1;transl_table=11 DALFDA020000017.1 tpg gene 12206 12856 . + . ID=gene-O5C65_002686;Name=O5C65_002686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002686 DALFDA020000017.1 Protein Homology CDS 12206 12856 . + 0 ID=cds-HJH9172782.1;Parent=gene-O5C65_002686;Dbxref=NCBI_GP:HJH9172782.1;Name=HJH9172782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693189.1;locus_tag=O5C65_002686;product=hypothetical protein;protein_id=HJH9172782.1;transl_table=11 DALFDA020000017.1 tpg gene 12853 14415 . + . ID=gene-O5C65_002687;Name=O5C65_002687;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002687 DALFDA020000017.1 Protein Homology CDS 12853 14415 . + 0 ID=cds-HJH9172783.1;Parent=gene-O5C65_002687;Dbxref=NCBI_GP:HJH9172783.1;Name=HJH9172783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693190.1;locus_tag=O5C65_002687;product=terminase;protein_id=HJH9172783.1;transl_table=11 DALFDA020000017.1 tpg gene 14427 15872 . + . ID=gene-O5C65_002688;Name=O5C65_002688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002688 DALFDA020000017.1 Protein Homology CDS 14427 15872 . + 0 ID=cds-HJH9172784.1;Parent=gene-O5C65_002688;Dbxref=NCBI_GP:HJH9172784.1;Name=HJH9172784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196583.1;locus_tag=O5C65_002688;product=DUF1073 domain-containing protein;protein_id=HJH9172784.1;transl_table=11 DALFDA020000017.1 tpg gene 15835 16842 . + . ID=gene-O5C65_002689;Name=O5C65_002689;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002689 DALFDA020000017.1 Protein Homology CDS 15835 16842 . + 0 ID=cds-HJH9172785.1;Parent=gene-O5C65_002689;Dbxref=NCBI_GP:HJH9172785.1;Name=HJH9172785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151274.1;locus_tag=O5C65_002689;product=phage minor head protein;protein_id=HJH9172785.1;transl_table=11 DALFDA020000017.1 tpg gene 16839 17042 . + . ID=gene-O5C65_002690;Name=O5C65_002690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002690 DALFDA020000017.1 GeneMarkS-2+ CDS 16839 17042 . + 0 ID=cds-HJH9172786.1;Parent=gene-O5C65_002690;Dbxref=NCBI_GP:HJH9172786.1;Name=HJH9172786.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_002690;product=hypothetical protein;protein_id=HJH9172786.1;transl_table=11 DALFDA020000017.1 tpg gene 17204 18574 . + . ID=gene-O5C65_002691;Name=O5C65_002691;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002691 DALFDA020000017.1 Protein Homology CDS 17204 18574 . + 0 ID=cds-HJH9172787.1;Parent=gene-O5C65_002691;Dbxref=NCBI_GP:HJH9172787.1;Name=HJH9172787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706549.1;locus_tag=O5C65_002691;product=DUF2213 domain-containing protein;protein_id=HJH9172787.1;transl_table=11 DALFDA020000017.1 tpg gene 18578 19024 . + . ID=gene-O5C65_002692;Name=O5C65_002692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002692 DALFDA020000017.1 Protein Homology CDS 18578 19024 . + 0 ID=cds-HJH9172788.1;Parent=gene-O5C65_002692;Dbxref=NCBI_GP:HJH9172788.1;Name=HJH9172788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151271.1;locus_tag=O5C65_002692;product=hypothetical protein;protein_id=HJH9172788.1;transl_table=11 DALFDA020000017.1 tpg gene 19036 20130 . + . ID=gene-O5C65_002693;Name=O5C65_002693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002693 DALFDA020000017.1 Protein Homology CDS 19036 20130 . + 0 ID=cds-HJH9172789.1;Parent=gene-O5C65_002693;Dbxref=NCBI_GP:HJH9172789.1;Name=HJH9172789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151270.1;locus_tag=O5C65_002693;product=major capsid protein;protein_id=HJH9172789.1;transl_table=11 DALFDA020000017.1 tpg gene 20140 20346 . + . ID=gene-O5C65_002694;Name=O5C65_002694;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002694 DALFDA020000017.1 Protein Homology CDS 20140 20346 . + 0 ID=cds-HJH9172790.1;Parent=gene-O5C65_002694;Dbxref=NCBI_GP:HJH9172790.1;Name=HJH9172790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706560.1;locus_tag=O5C65_002694;product=hypothetical protein;protein_id=HJH9172790.1;transl_table=11 DALFDA020000017.1 tpg gene 20349 20729 . + . ID=gene-O5C65_002695;Name=O5C65_002695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002695 DALFDA020000017.1 Protein Homology CDS 20349 20729 . + 0 ID=cds-HJH9172791.1;Parent=gene-O5C65_002695;Dbxref=NCBI_GP:HJH9172791.1;Name=HJH9172791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151268.1;locus_tag=O5C65_002695;product=DUF7370 family protein;protein_id=HJH9172791.1;transl_table=11 DALFDA020000017.1 tpg gene 20729 21004 . + . ID=gene-O5C65_002696;Name=O5C65_002696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002696 DALFDA020000017.1 Protein Homology CDS 20729 21004 . + 0 ID=cds-HJH9172792.1;Parent=gene-O5C65_002696;Dbxref=NCBI_GP:HJH9172792.1;Name=HJH9172792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000968548.1;locus_tag=O5C65_002696;product=hypothetical protein;protein_id=HJH9172792.1;transl_table=11 DALFDA020000017.1 tpg gene 21175 21531 . + . ID=gene-O5C65_002697;Name=O5C65_002697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002697 DALFDA020000017.1 Protein Homology CDS 21175 21531 . + 0 ID=cds-HJH9172793.1;Parent=gene-O5C65_002697;Dbxref=NCBI_GP:HJH9172793.1;Name=HJH9172793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170186.1;locus_tag=O5C65_002697;product=hypothetical protein;protein_id=HJH9172793.1;transl_table=11 DALFDA020000017.1 tpg gene 21533 21958 . + . ID=gene-O5C65_002698;Name=O5C65_002698;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002698 DALFDA020000017.1 Protein Homology CDS 21533 21958 . + 0 ID=cds-HJH9172794.1;Parent=gene-O5C65_002698;Dbxref=NCBI_GP:HJH9172794.1;Name=HJH9172794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196540.1;locus_tag=O5C65_002698;product=HK97 gp10 family phage protein;protein_id=HJH9172794.1;transl_table=11 DALFDA020000017.1 tpg gene 21955 22338 . + . ID=gene-O5C65_002699;Name=O5C65_002699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002699 DALFDA020000017.1 Protein Homology CDS 21955 22338 . + 0 ID=cds-HJH9172795.1;Parent=gene-O5C65_002699;Dbxref=NCBI_GP:HJH9172795.1;Name=HJH9172795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001514206.1;locus_tag=O5C65_002699;product=phage tail termination protein;protein_id=HJH9172795.1;transl_table=11 DALFDA020000017.1 tpg gene 22410 23168 . + . ID=gene-O5C65_002700;Name=O5C65_002700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002700 DALFDA020000017.1 Protein Homology CDS 22410 23168 . + 0 ID=cds-HJH9172796.1;Parent=gene-O5C65_002700;Dbxref=NCBI_GP:HJH9172796.1;Name=HJH9172796.1;Ontology_term=GO:0098026;gbkey=CDS;go_component=virus tail%2C tube|0098026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727935.1;locus_tag=O5C65_002700;product=phage tail tube protein;protein_id=HJH9172796.1;transl_table=11 DALFDA020000017.1 tpg gene 23225 23896 . + . ID=gene-O5C65_002701;Name=O5C65_002701;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002701 DALFDA020000017.1 Protein Homology CDS 23225 23896 . + 0 ID=cds-HJH9172797.1;Parent=gene-O5C65_002701;Dbxref=NCBI_GP:HJH9172797.1;Name=HJH9172797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727936.1;locus_tag=O5C65_002701;product=DUF6246 family protein;protein_id=HJH9172797.1;transl_table=11 DALFDA020000017.1 tpg gene 23915 26428 . + . ID=gene-O5C65_002702;Name=O5C65_002702;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002702 DALFDA020000017.1 Protein Homology CDS 23915 26428 . + 0 ID=cds-HJH9172798.1;Parent=gene-O5C65_002702;Dbxref=NCBI_GP:HJH9172798.1;Name=HJH9172798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046199.1;locus_tag=O5C65_002702;product=phage tail length tape measure family protein;protein_id=HJH9172798.1;transl_table=11 DALFDA020000017.1 tpg gene 26431 26934 . + . ID=gene-O5C65_002703;Name=O5C65_002703;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002703 DALFDA020000017.1 Protein Homology CDS 26431 26934 . + 0 ID=cds-HJH9172799.1;Parent=gene-O5C65_002703;Dbxref=NCBI_GP:HJH9172799.1;Name=HJH9172799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014883988.1;locus_tag=O5C65_002703;product=hypothetical protein;protein_id=HJH9172799.1;transl_table=11 DALFDA020000017.1 tpg gene 26934 27404 . + . ID=gene-O5C65_002704;Name=O5C65_002704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002704 DALFDA020000017.1 Protein Homology CDS 26934 27404 . + 0 ID=cds-HJH9172800.1;Parent=gene-O5C65_002704;Dbxref=NCBI_GP:HJH9172800.1;Name=HJH9172800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727939.1;locus_tag=O5C65_002704;product=hypothetical protein;protein_id=HJH9172800.1;transl_table=11 DALFDA020000017.1 tpg gene 27397 27855 . + . ID=gene-O5C65_002705;Name=O5C65_002705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002705 DALFDA020000017.1 Protein Homology CDS 27397 27855 . + 0 ID=cds-HJH9172801.1;Parent=gene-O5C65_002705;Dbxref=NCBI_GP:HJH9172801.1;Name=HJH9172801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001278433.1;locus_tag=O5C65_002705;product=NlpC/P60 family protein;protein_id=HJH9172801.1;transl_table=11 DALFDA020000017.1 tpg gene 27959 30268 . + . ID=gene-O5C65_002706;Name=O5C65_002706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002706 DALFDA020000017.1 Protein Homology CDS 27959 30268 . + 0 ID=cds-HJH9172802.1;Parent=gene-O5C65_002706;Dbxref=NCBI_GP:HJH9172802.1;Name=HJH9172802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014070781.1;locus_tag=O5C65_002706;product=host specificity factor TipJ family phage tail protein;protein_id=HJH9172802.1;transl_table=11 DALFDA020000017.1 tpg gene 30326 32458 . + . ID=gene-O5C65_002707;Name=O5C65_002707;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002707 DALFDA020000017.1 Protein Homology CDS 30326 32458 . + 0 ID=cds-HJH9172803.1;Parent=gene-O5C65_002707;Dbxref=NCBI_GP:HJH9172803.1;Name=HJH9172803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280398.1;locus_tag=O5C65_002707;product=GDSL-type esterase/lipase family protein;protein_id=HJH9172803.1;transl_table=11 DALFDA020000017.1 tpg gene 32804 34726 . - . ID=gene-O5C65_002708;Name=O5C65_002708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002708 DALFDA020000017.1 Protein Homology CDS 32804 34726 . - 0 ID=cds-HJH9172804.1;Parent=gene-O5C65_002708;Dbxref=NCBI_GP:HJH9172804.1;Name=HJH9172804.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400614.1;locus_tag=O5C65_002708;product=acyltransferase family protein;protein_id=HJH9172804.1;transl_table=11 DALFDA020000017.1 tpg gene 34798 35073 . - . ID=gene-O5C65_002709;Name=O5C65_002709;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002709 DALFDA020000017.1 GeneMarkS-2+ CDS 34798 35073 . - 0 ID=cds-HJH9172805.1;Parent=gene-O5C65_002709;Dbxref=NCBI_GP:HJH9172805.1;Name=HJH9172805.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_002709;product=hypothetical protein;protein_id=HJH9172805.1;transl_table=11 DALFDA020000017.1 tpg pseudogene 35187 35561 . + . ID=gene-O5C65_002710;Name=O5C65_002710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_002710;pseudo=true DALFDA020000017.1 Protein Homology CDS 35187 35561 . + 0 ID=cds-O5C65_002710;Parent=gene-O5C65_002710;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156663.1;locus_tag=O5C65_002710;product=S24 family peptidase;pseudo=true;transl_table=11 DALFDA020000017.1 tpg pseudogene 36104 36208 . + . ID=gene-O5C65_002711;Name=O5C65_002711;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_002711;pseudo=true DALFDA020000017.1 Protein Homology CDS 36104 36208 . + 0 ID=cds-O5C65_002711;Parent=gene-O5C65_002711;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000574020.1;locus_tag=O5C65_002711;product=cation transporter;pseudo=true;transl_table=11 DALFDA020000017.1 tpg gene 36259 37113 . - . ID=gene-O5C65_002712;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=O5C65_002712 DALFDA020000017.1 Protein Homology CDS 36259 37113 . - 0 ID=cds-HJH9172806.1;Parent=gene-O5C65_002712;Dbxref=NCBI_GP:HJH9172806.1;Name=HJH9172806.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459555.1;locus_tag=O5C65_002712;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=HJH9172806.1;transl_table=11 DALFDA020000017.1 tpg gene 37329 38654 . + . ID=gene-O5C65_002713;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=O5C65_002713 DALFDA020000017.1 Protein Homology CDS 37329 38654 . + 0 ID=cds-HJH9172807.1;Parent=gene-O5C65_002713;Dbxref=NCBI_GP:HJH9172807.1;Name=HJH9172807.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459556.1;locus_tag=O5C65_002713;product=reactive chlorine resistance oxidoreductase RclA;protein_id=HJH9172807.1;transl_table=11 DALFDA020000017.1 tpg gene 38811 39047 . + . ID=gene-O5C65_002714;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=O5C65_002714 DALFDA020000017.1 Protein Homology CDS 38811 39047 . + 0 ID=cds-HJH9172808.1;Parent=gene-O5C65_002714;Dbxref=NCBI_GP:HJH9172808.1;Name=HJH9172808.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459557.1;locus_tag=O5C65_002714;product=reactive chlorine resistance periplasmic protein RclB;protein_id=HJH9172808.1;transl_table=11 DALFDA020000017.1 tpg gene 39060 39620 . + . ID=gene-O5C65_002715;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=O5C65_002715 DALFDA020000017.1 Protein Homology CDS 39060 39620 . + 0 ID=cds-HJH9172809.1;Parent=gene-O5C65_002715;Dbxref=NCBI_GP:HJH9172809.1;Name=HJH9172809.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459558.1;locus_tag=O5C65_002715;product=reactive chlorine resistance membrane protein RclC;protein_id=HJH9172809.1;transl_table=11 DALFDA020000017.1 tpg gene 39699 40874 . - . ID=gene-O5C65_002716;Name=O5C65_002716;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002716 DALFDA020000017.1 Protein Homology CDS 39699 40874 . - 0 ID=cds-HJH9172810.1;Parent=gene-O5C65_002716;Dbxref=NCBI_GP:HJH9172810.1;Name=HJH9172810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459559.1;locus_tag=O5C65_002716;product=DnaJ family molecular chaperone;protein_id=HJH9172810.1;transl_table=11 DALFDA020000017.1 tpg gene 41200 42594 . + . ID=gene-O5C65_002717;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=O5C65_002717 DALFDA020000017.1 Protein Homology CDS 41200 42594 . + 0 ID=cds-HJH9172811.1;Parent=gene-O5C65_002717;Dbxref=NCBI_GP:HJH9172811.1;Name=HJH9172811.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459560.1;locus_tag=O5C65_002717;product=phenylalanine transporter;protein_id=HJH9172811.1;transl_table=11 DALFDA020000017.1 tpg gene 42636 43883 . - . ID=gene-O5C65_002718;Name=O5C65_002718;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002718 DALFDA020000017.1 Protein Homology CDS 42636 43883 . - 0 ID=cds-HJH9172812.1;Parent=gene-O5C65_002718;Dbxref=NCBI_GP:HJH9172812.1;Name=HJH9172812.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459561.1;locus_tag=O5C65_002718;product=mechanosensitive ion channel family protein;protein_id=HJH9172812.1;transl_table=11 DALFDA020000017.1 tpg gene 44194 46164 . + . ID=gene-O5C65_002719;Name=O5C65_002719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002719 DALFDA020000017.1 Protein Homology CDS 44194 46164 . + 0 ID=cds-HJH9172813.1;Parent=gene-O5C65_002719;Dbxref=NCBI_GP:HJH9172813.1;Name=HJH9172813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459562.1;locus_tag=O5C65_002719;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=HJH9172813.1;transl_table=11 DALFDA020000017.1 tpg gene 46430 47083 . - . ID=gene-O5C65_002720;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=O5C65_002720 DALFDA020000017.1 Protein Homology CDS 46430 47083 . - 0 ID=cds-HJH9172814.1;Parent=gene-O5C65_002720;Dbxref=NCBI_GP:HJH9172814.1;Name=HJH9172814.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459570.1;locus_tag=O5C65_002720;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=HJH9172814.1;transl_table=11 DALFDA020000017.1 tpg gene 47180 47548 . - . ID=gene-O5C65_002721;Name=O5C65_002721;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002721 DALFDA020000017.1 Protein Homology CDS 47180 47548 . - 0 ID=cds-HJH9172815.1;Parent=gene-O5C65_002721;Dbxref=NCBI_GP:HJH9172815.1;Name=HJH9172815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459571.1;locus_tag=O5C65_002721;product=MmcQ/YjbR family DNA-binding protein;protein_id=HJH9172815.1;transl_table=11 DALFDA020000017.1 tpg gene 47548 48129 . - . ID=gene-O5C65_002722;Name=O5C65_002722;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002722 DALFDA020000017.1 Protein Homology CDS 47548 48129 . - 0 ID=cds-HJH9172816.1;Parent=gene-O5C65_002722;Dbxref=NCBI_GP:HJH9172816.1;Name=HJH9172816.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459572.1;locus_tag=O5C65_002722;product=TetR/AcrR family transcriptional regulator;protein_id=HJH9172816.1;transl_table=11 DALFDA020000017.1 tpg gene 48418 48759 . + . ID=gene-O5C65_002723;Name=O5C65_002723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002723 DALFDA020000017.1 Protein Homology CDS 48418 48759 . + 0 ID=cds-HJH9172817.1;Parent=gene-O5C65_002723;Dbxref=NCBI_GP:HJH9172817.1;Name=HJH9172817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459573.1;locus_tag=O5C65_002723;product=RamA family antibiotic efflux transcriptional regulator;protein_id=HJH9172817.1;transl_table=11 DALFDA020000017.1 tpg gene 48765 49013 . - . ID=gene-O5C65_002724;Name=O5C65_002724;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002724 DALFDA020000017.1 Protein Homology CDS 48765 49013 . - 0 ID=cds-HJH9172818.1;Parent=gene-O5C65_002724;Dbxref=NCBI_GP:HJH9172818.1;Name=HJH9172818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459574.1;locus_tag=O5C65_002724;product=DUF1158 family protein;protein_id=HJH9172818.1;transl_table=11 DALFDA020000017.1 tpg gene 49080 50198 . - . ID=gene-O5C65_002725;Name=O5C65_002725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002725 DALFDA020000017.1 Protein Homology CDS 49080 50198 . - 0 ID=cds-HJH9172819.1;Parent=gene-O5C65_002725;Dbxref=NCBI_GP:HJH9172819.1;Name=HJH9172819.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459575.1;locus_tag=O5C65_002725;product=YbdK family carboxylate-amine ligase;protein_id=HJH9172819.1;transl_table=11 DALFDA020000017.1 tpg gene 50210 50914 . - . ID=gene-O5C65_002726;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=O5C65_002726 DALFDA020000017.1 Protein Homology CDS 50210 50914 . - 0 ID=cds-HJH9172820.1;Parent=gene-O5C65_002726;Dbxref=NCBI_GP:HJH9172820.1;Name=HJH9172820.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459576.1;locus_tag=O5C65_002726;product=enterobactin synthase subunit EntD;protein_id=HJH9172820.1;transl_table=11 DALFDA020000017.1 tpg gene 50961 53216 . - . ID=gene-O5C65_002727;Name=O5C65_002727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002727 DALFDA020000017.1 Protein Homology CDS 50961 53216 . - 0 ID=cds-HJH9172821.1;Parent=gene-O5C65_002727;Dbxref=NCBI_GP:HJH9172821.1;Name=HJH9172821.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459577.1;locus_tag=O5C65_002727;product=TonB-dependent siderophore receptor;protein_id=HJH9172821.1;transl_table=11 DALFDA020000017.1 tpg gene 53405 54619 . + . ID=gene-O5C65_002728;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=O5C65_002728 DALFDA020000017.1 Protein Homology CDS 53405 54619 . + 0 ID=cds-HJH9172822.1;Parent=gene-O5C65_002728;Dbxref=NCBI_GP:HJH9172822.1;Name=HJH9172822.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459578.1;locus_tag=O5C65_002728;product=enterochelin esterase;protein_id=HJH9172822.1;transl_table=11 DALFDA020000017.1 tpg gene 54650 54868 . + . ID=gene-O5C65_002729;Name=O5C65_002729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002729 DALFDA020000017.1 Protein Homology CDS 54650 54868 . + 0 ID=cds-HJH9172823.1;Parent=gene-O5C65_002729;Dbxref=NCBI_GP:HJH9172823.1;Name=HJH9172823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459579.1;locus_tag=O5C65_002729;product=MbtH family protein;protein_id=HJH9172823.1;transl_table=11 DALFDA020000017.1 tpg gene 54865 58749 . + . ID=gene-O5C65_002730;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=O5C65_002730 DALFDA020000017.1 Protein Homology CDS 54865 58749 . + 0 ID=cds-HJH9172824.1;Parent=gene-O5C65_002730;Dbxref=NCBI_GP:HJH9172824.1;Name=HJH9172824.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=O5C65_002730;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=HJH9172824.1;transl_table=11 DALFDA020000017.1 tpg gene 58999 60135 . + . ID=gene-O5C65_002731;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=O5C65_002731 DALFDA020000017.1 Protein Homology CDS 58999 60135 . + 0 ID=cds-HJH9172825.1;Parent=gene-O5C65_002731;Dbxref=NCBI_GP:HJH9172825.1;Name=HJH9172825.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459581.1;locus_tag=O5C65_002731;product=LPS O-antigen length regulator Wzz(fepE);protein_id=HJH9172825.1;transl_table=11 DALFDA020000017.1 tpg gene 60188 60982 . - . ID=gene-O5C65_002732;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=O5C65_002732 DALFDA020000017.1 Protein Homology CDS 60188 60982 . - 0 ID=cds-HJH9172826.1;Parent=gene-O5C65_002732;Dbxref=NCBI_GP:HJH9172826.1;Name=HJH9172826.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459582.1;locus_tag=O5C65_002732;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=HJH9172826.1;transl_table=11 DALFDA020000017.1 tpg gene 60979 61968 . - . ID=gene-O5C65_002733;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=O5C65_002733 DALFDA020000017.1 Protein Homology CDS 60979 61968 . - 0 ID=cds-HJH9172827.1;Parent=gene-O5C65_002733;Dbxref=NCBI_GP:HJH9172827.1;Name=HJH9172827.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459583.1;locus_tag=O5C65_002733;product=iron-enterobactin ABC transporter permease;protein_id=HJH9172827.1;transl_table=11 DALFDA020000017.1 tpg gene 61968 62975 . - . ID=gene-O5C65_002734;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=O5C65_002734 DALFDA020000017.1 Protein Homology CDS 61968 62975 . - 0 ID=cds-HJH9172828.1;Parent=gene-O5C65_002734;Dbxref=NCBI_GP:HJH9172828.1;Name=HJH9172828.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459584.1;locus_tag=O5C65_002734;product=Fe(3+)-siderophore ABC transporter permease;protein_id=HJH9172828.1;transl_table=11 DALFDA020000017.1 tpg gene 63086 64330 . + . ID=gene-O5C65_002735;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=O5C65_002735 DALFDA020000017.1 Protein Homology CDS 63086 64330 . + 0 ID=cds-HJH9172829.1;Parent=gene-O5C65_002735;Dbxref=NCBI_GP:HJH9172829.1;Name=HJH9172829.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459585.1;locus_tag=O5C65_002735;product=enterobactin transporter EntS;protein_id=HJH9172829.1;transl_table=11 DALFDA020000017.1 tpg gene 64393 65349 . - . ID=gene-O5C65_002736;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=O5C65_002736 DALFDA020000017.1 Protein Homology CDS 64393 65349 . - 0 ID=cds-HJH9172830.1;Parent=gene-O5C65_002736;Dbxref=NCBI_GP:HJH9172830.1;Name=HJH9172830.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459586.1;locus_tag=O5C65_002736;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=HJH9172830.1;transl_table=11 DALFDA020000017.1 tpg gene 65658 66833 . + . ID=gene-O5C65_002737;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=O5C65_002737 DALFDA020000017.1 Protein Homology CDS 65658 66833 . + 0 ID=cds-HJH9172831.1;Parent=gene-O5C65_002737;Dbxref=NCBI_GP:HJH9172831.1;Name=HJH9172831.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459587.1;locus_tag=O5C65_002737;product=isochorismate synthase EntC;protein_id=HJH9172831.1;transl_table=11 DALFDA020000017.1 tpg gene 66843 68453 . + . ID=gene-O5C65_002738;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=O5C65_002738 DALFDA020000017.1 Protein Homology CDS 66843 68453 . + 0 ID=cds-HJH9172832.1;Parent=gene-O5C65_002738;Dbxref=NCBI_GP:HJH9172832.1;Name=HJH9172832.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459588.1;locus_tag=O5C65_002738;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=HJH9172832.1;transl_table=11 DALFDA020000017.1 tpg gene 68467 69324 . + . ID=gene-O5C65_002739;Name=O5C65_002739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002739 DALFDA020000017.1 Protein Homology CDS 68467 69324 . + 0 ID=cds-HJH9172833.1;Parent=gene-O5C65_002739;Dbxref=NCBI_GP:HJH9172833.1;Name=HJH9172833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459589.1;locus_tag=O5C65_002739;product=isochorismatase family protein;protein_id=HJH9172833.1;transl_table=11 DALFDA020000017.1 tpg gene 69324 70079 . + . ID=gene-O5C65_002740;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=O5C65_002740 DALFDA020000017.1 Protein Homology CDS 69324 70079 . + 0 ID=cds-HJH9172834.1;Parent=gene-O5C65_002740;Dbxref=NCBI_GP:HJH9172834.1;Name=HJH9172834.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459590.1;locus_tag=O5C65_002740;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=HJH9172834.1;transl_table=11 DALFDA020000017.1 tpg gene 70082 70495 . + . ID=gene-O5C65_002741;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=O5C65_002741 DALFDA020000017.1 Protein Homology CDS 70082 70495 . + 0 ID=cds-HJH9172835.1;Parent=gene-O5C65_002741;Dbxref=NCBI_GP:HJH9172835.1;Name=HJH9172835.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459591.1;locus_tag=O5C65_002741;product=proofreading thioesterase EntH;protein_id=HJH9172835.1;transl_table=11 DALFDA020000017.1 tpg gene 70677 72782 . + . ID=gene-O5C65_002742;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=O5C65_002742 DALFDA020000017.1 Protein Homology CDS 70677 72782 . + 0 ID=cds-HJH9172836.1;Parent=gene-O5C65_002742;Dbxref=NCBI_GP:HJH9172836.1;Name=HJH9172836.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459592.1;locus_tag=O5C65_002742;product=pyruvate/proton symporter CstA;protein_id=HJH9172836.1;transl_table=11 DALFDA020000017.1 tpg gene 72846 73043 . + . ID=gene-O5C65_002743;Name=O5C65_002743;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002743 DALFDA020000017.1 Protein Homology CDS 72846 73043 . + 0 ID=cds-HJH9172837.1;Parent=gene-O5C65_002743;Dbxref=NCBI_GP:HJH9172837.1;Name=HJH9172837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=O5C65_002743;product=YbdD/YjiX family protein;protein_id=HJH9172837.1;transl_table=11 DALFDA020000017.1 tpg gene 73079 74167 . - . ID=gene-O5C65_002744;Name=O5C65_002744;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002744 DALFDA020000017.1 Protein Homology CDS 73079 74167 . - 0 ID=cds-HJH9172838.1;Parent=gene-O5C65_002744;Dbxref=NCBI_GP:HJH9172838.1;Name=HJH9172838.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459594.1;locus_tag=O5C65_002744;product=oxidoreductase;protein_id=HJH9172838.1;transl_table=11 DALFDA020000017.1 tpg gene 74294 75454 . + . ID=gene-O5C65_002745;Name=O5C65_002745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002745 DALFDA020000017.1 Protein Homology CDS 74294 75454 . + 0 ID=cds-HJH9172839.1;Parent=gene-O5C65_002745;Dbxref=NCBI_GP:HJH9172839.1;Name=HJH9172839.1;Ontology_term=GO:0008483,GO:0016740;gbkey=CDS;go_function=transaminase activity|0008483||IEA,transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459595.1;locus_tag=O5C65_002745;product=pyridoxal phosphate-dependent aminotransferase;protein_id=HJH9172839.1;transl_table=11 DALFDA020000017.1 tpg gene 75455 76072 . - . ID=gene-O5C65_002746;Name=O5C65_002746;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002746 DALFDA020000017.1 Protein Homology CDS 75455 76072 . - 0 ID=cds-HJH9172840.1;Parent=gene-O5C65_002746;Dbxref=NCBI_GP:HJH9172840.1;Name=HJH9172840.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459596.1;locus_tag=O5C65_002746;product=IbrB-like domain-containing protein;protein_id=HJH9172840.1;transl_table=11 DALFDA020000017.1 tpg gene 76045 77280 . - . ID=gene-O5C65_002747;Name=O5C65_002747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002747 DALFDA020000017.1 Protein Homology CDS 76045 77280 . - 0 ID=cds-HJH9172841.1;Parent=gene-O5C65_002747;Dbxref=NCBI_GP:HJH9172841.1;Name=HJH9172841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459597.1;locus_tag=O5C65_002747;product=phosphoadenosine phosphosulfate reductase;protein_id=HJH9172841.1;transl_table=11 DALFDA020000017.1 tpg gene 77445 78347 . - . ID=gene-O5C65_002748;Name=citR;gbkey=Gene;gene=citR;gene_biotype=protein_coding;locus_tag=O5C65_002748 DALFDA020000017.1 Protein Homology CDS 77445 78347 . - 0 ID=cds-HJH9172842.1;Parent=gene-O5C65_002748;Dbxref=NCBI_GP:HJH9172842.1;Name=HJH9172842.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=citR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459598.1;locus_tag=O5C65_002748;product=DNA-binding transcriptional repressor CitR;protein_id=HJH9172842.1;transl_table=11 DALFDA020000017.1 tpg gene 78664 79410 . - . ID=gene-O5C65_002749;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=O5C65_002749 DALFDA020000017.1 Protein Homology CDS 78664 79410 . - 0 ID=cds-HJH9172843.1;Parent=gene-O5C65_002749;Dbxref=NCBI_GP:HJH9172843.1;Name=HJH9172843.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459599.1;locus_tag=O5C65_002749;product=thiol:disulfide interchange protein DsbG;protein_id=HJH9172843.1;transl_table=11 DALFDA020000017.1 tpg gene 79851 80414 . + . ID=gene-O5C65_002750;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=O5C65_002750 DALFDA020000017.1 Protein Homology CDS 79851 80414 . + 0 ID=cds-HJH9172844.1;Parent=gene-O5C65_002750;Dbxref=NCBI_GP:HJH9172844.1;Name=HJH9172844.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=O5C65_002750;product=alkyl hydroperoxide reductase subunit C;protein_id=HJH9172844.1;transl_table=11 DALFDA020000017.1 tpg gene 80656 82221 . + . ID=gene-O5C65_002751;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=O5C65_002751 DALFDA020000017.1 Protein Homology CDS 80656 82221 . + 0 ID=cds-HJH9172845.1;Parent=gene-O5C65_002751;Dbxref=NCBI_GP:HJH9172845.1;Name=HJH9172845.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459601.1;locus_tag=O5C65_002751;product=alkyl hydroperoxide reductase subunit F;protein_id=HJH9172845.1;transl_table=11 DALFDA020000017.1 tpg gene 82554 83114 . + . ID=gene-O5C65_002752;Name=O5C65_002752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002752 DALFDA020000017.1 Protein Homology CDS 82554 83114 . + 0 ID=cds-HJH9172846.1;Parent=gene-O5C65_002752;Dbxref=NCBI_GP:HJH9172846.1;Name=HJH9172846.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459602.1;locus_tag=O5C65_002752;product=TorD/DmsD family molecular chaperone;protein_id=HJH9172846.1;transl_table=11 DALFDA020000017.1 tpg gene 83107 85386 . + . ID=gene-O5C65_002753;Name=O5C65_002753;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002753 DALFDA020000017.1 Protein Homology CDS 83107 85386 . + 0 ID=cds-HJH9172847.1;Parent=gene-O5C65_002753;Dbxref=NCBI_GP:HJH9172847.1;Name=HJH9172847.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459603.1;locus_tag=O5C65_002753;product=molybdopterin-dependent oxidoreductase;protein_id=HJH9172847.1;transl_table=11 DALFDA020000017.1 tpg gene 85383 85940 . + . ID=gene-O5C65_002754;Name=O5C65_002754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002754 DALFDA020000017.1 Protein Homology CDS 85383 85940 . + 0 ID=cds-HJH9172848.1;Parent=gene-O5C65_002754;Dbxref=NCBI_GP:HJH9172848.1;Name=HJH9172848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459604.1;locus_tag=O5C65_002754;product=4Fe-4S dicluster domain-containing protein;protein_id=HJH9172848.1;transl_table=11 DALFDA020000017.1 tpg gene 85940 86707 . + . ID=gene-O5C65_002755;Name=O5C65_002755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002755 DALFDA020000017.1 Protein Homology CDS 85940 86707 . + 0 ID=cds-HJH9172849.1;Parent=gene-O5C65_002755;Dbxref=NCBI_GP:HJH9172849.1;Name=HJH9172849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459605.1;locus_tag=O5C65_002755;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=HJH9172849.1;transl_table=11 DALFDA020000017.1 tpg gene 86775 87203 . - . ID=gene-O5C65_002756;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=O5C65_002756 DALFDA020000017.1 Protein Homology CDS 86775 87203 . - 0 ID=cds-HJH9172850.1;Parent=gene-O5C65_002756;Dbxref=NCBI_GP:HJH9172850.1;Name=HJH9172850.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459606.1;locus_tag=O5C65_002756;product=universal stress protein UspG;protein_id=HJH9172850.1;transl_table=11 DALFDA020000017.1 tpg gene 87426 88664 . + . ID=gene-O5C65_002757;Name=O5C65_002757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002757 DALFDA020000017.1 Protein Homology CDS 87426 88664 . + 0 ID=cds-HJH9172851.1;Parent=gene-O5C65_002757;Dbxref=NCBI_GP:HJH9172851.1;Name=HJH9172851.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459607.1;locus_tag=O5C65_002757;product=zinc-dependent alcohol dehydrogenase;protein_id=HJH9172851.1;transl_table=11 DALFDA020000017.1 tpg gene 88747 89157 . - . ID=gene-O5C65_002758;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=O5C65_002758 DALFDA020000017.1 Protein Homology CDS 88747 89157 . - 0 ID=cds-HJH9172852.1;Parent=gene-O5C65_002758;Dbxref=NCBI_GP:HJH9172852.1;Name=HJH9172852.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459608.1;locus_tag=O5C65_002758;product=nucleoside diphosphate kinase regulator;protein_id=HJH9172852.1;transl_table=11 DALFDA020000017.1 tpg gene 89392 90198 . - . ID=gene-O5C65_002759;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=O5C65_002759 DALFDA020000017.1 Protein Homology CDS 89392 90198 . - 0 ID=cds-HJH9172853.1;Parent=gene-O5C65_002759;Dbxref=NCBI_GP:HJH9172853.1;Name=HJH9172853.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459609.1;locus_tag=O5C65_002759;product=ribonuclease I;protein_id=HJH9172853.1;transl_table=11 DALFDA020000017.1 tpg gene 90308 91771 . - . ID=gene-O5C65_002760;Name=O5C65_002760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002760 DALFDA020000017.1 Protein Homology CDS 90308 91771 . - 0 ID=cds-HJH9172854.1;Parent=gene-O5C65_002760;Dbxref=NCBI_GP:HJH9172854.1;Name=HJH9172854.1;Ontology_term=GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459610.1;locus_tag=O5C65_002760;product=anion permease;protein_id=HJH9172854.1;transl_table=11 DALFDA020000017.1 tpg gene 91809 92705 . - . ID=gene-O5C65_002761;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=O5C65_002761 DALFDA020000017.1 Protein Homology CDS 91809 92705 . - 0 ID=cds-HJH9172855.1;Parent=gene-O5C65_002761;Dbxref=NCBI_GP:HJH9172855.1;Name=HJH9172855.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459611.1;locus_tag=O5C65_002761;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=HJH9172855.1;transl_table=11 DALFDA020000017.1 tpg gene 92677 93228 . - . ID=gene-O5C65_002762;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=O5C65_002762 DALFDA020000017.1 Protein Homology CDS 92677 93228 . - 0 ID=cds-HJH9172856.1;Parent=gene-O5C65_002762;Dbxref=NCBI_GP:HJH9172856.1;Name=HJH9172856.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459612.1;locus_tag=O5C65_002762;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=HJH9172856.1;transl_table=11 DALFDA020000017.1 tpg gene 93232 94761 . - . ID=gene-O5C65_002763;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=O5C65_002763 DALFDA020000017.1 Protein Homology CDS 93232 94761 . - 0 ID=cds-HJH9172857.1;Parent=gene-O5C65_002763;Dbxref=NCBI_GP:HJH9172857.1;Name=HJH9172857.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459613.1;locus_tag=O5C65_002763;product=citrate lyase subunit alpha;protein_id=HJH9172857.1;transl_table=11 DALFDA020000017.1 tpg gene 94771 95679 . - . ID=gene-O5C65_002764;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=O5C65_002764 DALFDA020000017.1 Protein Homology CDS 94771 95679 . - 0 ID=cds-HJH9172858.1;Parent=gene-O5C65_002764;Dbxref=NCBI_GP:HJH9172858.1;Name=HJH9172858.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459614.1;locus_tag=O5C65_002764;product=citrate (pro-3S)-lyase subunit beta;protein_id=HJH9172858.1;transl_table=11 DALFDA020000017.1 tpg gene 95676 95972 . - . ID=gene-O5C65_002765;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=O5C65_002765 DALFDA020000017.1 Protein Homology CDS 95676 95972 . - 0 ID=cds-HJH9172859.1;Parent=gene-O5C65_002765;Dbxref=NCBI_GP:HJH9172859.1;Name=HJH9172859.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459615.1;locus_tag=O5C65_002765;product=citrate lyase acyl carrier protein;protein_id=HJH9172859.1;transl_table=11 DALFDA020000017.1 tpg gene 95969 97045 . - . ID=gene-O5C65_002766;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=O5C65_002766 DALFDA020000017.1 Protein Homology CDS 95969 97045 . - 0 ID=cds-HJH9172860.1;Parent=gene-O5C65_002766;Dbxref=NCBI_GP:HJH9172860.1;Name=HJH9172860.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459616.1;locus_tag=O5C65_002766;product=[citrate (pro-3S)-lyase] ligase;protein_id=HJH9172860.1;transl_table=11 DALFDA020000017.1 tpg gene 97430 99091 . + . ID=gene-O5C65_002767;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=O5C65_002767 DALFDA020000017.1 Protein Homology CDS 97430 99091 . + 0 ID=cds-HJH9172861.1;Parent=gene-O5C65_002767;Dbxref=NCBI_GP:HJH9172861.1;Name=HJH9172861.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459617.1;locus_tag=O5C65_002767;product=sensor histidine kinase DpiB;protein_id=HJH9172861.1;transl_table=11 DALFDA020000017.1 tpg gene 99060 99740 . + . ID=gene-O5C65_002768;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=O5C65_002768 DALFDA020000017.1 Protein Homology CDS 99060 99740 . + 0 ID=cds-HJH9172862.1;Parent=gene-O5C65_002768;Dbxref=NCBI_GP:HJH9172862.1;Name=HJH9172862.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459618.1;locus_tag=O5C65_002768;product=two-component response regulator DpiA;protein_id=HJH9172862.1;transl_table=11 DALFDA020000017.1 tpg gene 99791 101179 . - . ID=gene-O5C65_002769;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=O5C65_002769 DALFDA020000017.1 Protein Homology CDS 99791 101179 . - 0 ID=cds-HJH9172863.1;Parent=gene-O5C65_002769;Dbxref=NCBI_GP:HJH9172863.1;Name=HJH9172863.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459619.1;locus_tag=O5C65_002769;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=HJH9172863.1;transl_table=11 DALFDA020000017.1 tpg gene 101556 102128 . + . ID=gene-O5C65_002770;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=O5C65_002770 DALFDA020000017.1 Protein Homology CDS 101556 102128 . + 0 ID=cds-HJH9172864.1;Parent=gene-O5C65_002770;Dbxref=NCBI_GP:HJH9172864.1;Name=HJH9172864.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459620.1;locus_tag=O5C65_002770;product=lipid IV(A) palmitoyltransferase PagP;protein_id=HJH9172864.1;transl_table=11 DALFDA020000017.1 tpg gene 102316 102525 . + . ID=gene-O5C65_002771;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=O5C65_002771 DALFDA020000017.1 Protein Homology CDS 102316 102525 . + 0 ID=cds-HJH9172865.1;Parent=gene-O5C65_002771;Dbxref=NCBI_GP:HJH9172865.1;Name=HJH9172865.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459621.1;locus_tag=O5C65_002771;product=transcription antiterminator/RNA stability regulator CspE;protein_id=HJH9172865.1;transl_table=11 DALFDA020000017.1 tpg gene 102583 102966 . - . ID=gene-O5C65_002772;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=O5C65_002772 DALFDA020000017.1 Protein Homology CDS 102583 102966 . - 0 ID=cds-HJH9172866.1;Parent=gene-O5C65_002772;Dbxref=NCBI_GP:HJH9172866.1;Name=HJH9172866.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459622.1;locus_tag=O5C65_002772;product=fluoride efflux transporter CrcB;protein_id=HJH9172866.1;transl_table=11 DALFDA020000017.1 tpg gene 103057 103845 . + . ID=gene-O5C65_002773;Name=O5C65_002773;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002773 DALFDA020000017.1 Protein Homology CDS 103057 103845 . + 0 ID=cds-HJH9172867.1;Parent=gene-O5C65_002773;Dbxref=NCBI_GP:HJH9172867.1;Name=HJH9172867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459623.1;locus_tag=O5C65_002773;product=deaminated glutathione amidase;protein_id=HJH9172867.1;transl_table=11 DALFDA020000017.1 tpg gene 103974 104177 . + . ID=gene-O5C65_002774;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=O5C65_002774 DALFDA020000017.1 Protein Homology CDS 103974 104177 . + 0 ID=cds-HJH9172868.1;Parent=gene-O5C65_002774;Dbxref=NCBI_GP:HJH9172868.1;Name=HJH9172868.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459624.1;locus_tag=O5C65_002774;product=twin-arginine translocase subunit TatE;protein_id=HJH9172868.1;transl_table=11 DALFDA020000017.1 tpg gene 104263 105228 . - . ID=gene-O5C65_002775;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=O5C65_002775 DALFDA020000017.1 Protein Homology CDS 104263 105228 . - 0 ID=cds-HJH9172869.1;Parent=gene-O5C65_002775;Dbxref=NCBI_GP:HJH9172869.1;Name=HJH9172869.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=O5C65_002775;product=lipoyl synthase;protein_id=HJH9172869.1;transl_table=11 DALFDA020000017.1 tpg gene 105434 106387 . - . ID=gene-O5C65_002776;Name=O5C65_002776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002776 DALFDA020000017.1 Protein Homology CDS 105434 106387 . - 0 ID=cds-HJH9172870.1;Parent=gene-O5C65_002776;Dbxref=NCBI_GP:HJH9172870.1;Name=HJH9172870.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459626.1;locus_tag=O5C65_002776;product=YbeF family transcriptional regulator;protein_id=HJH9172870.1;transl_table=11 DALFDA020000017.1 tpg gene 106689 107330 . - . ID=gene-O5C65_002777;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=O5C65_002777 DALFDA020000017.1 Protein Homology CDS 106689 107330 . - 0 ID=cds-HJH9172871.1;Parent=gene-O5C65_002777;Dbxref=NCBI_GP:HJH9172871.1;Name=HJH9172871.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=O5C65_002777;product=lipoyl(octanoyl) transferase LipB;protein_id=HJH9172871.1;transl_table=11 DALFDA020000017.1 tpg gene 107430 107693 . - . ID=gene-O5C65_002778;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=O5C65_002778 DALFDA020000017.1 Protein Homology CDS 107430 107693 . - 0 ID=cds-HJH9172872.1;Parent=gene-O5C65_002778;Dbxref=NCBI_GP:HJH9172872.1;Name=HJH9172872.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459628.1;locus_tag=O5C65_002778;product=DUF493 family protein YbeD;protein_id=HJH9172872.1;transl_table=11 DALFDA020000017.1 tpg gene 107801 109012 . - . ID=gene-O5C65_002779;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=O5C65_002779 DALFDA020000017.1 Protein Homology CDS 107801 109012 . - 0 ID=cds-HJH9172873.1;Parent=gene-O5C65_002779;Dbxref=NCBI_GP:HJH9172873.1;Name=HJH9172873.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459629.1;locus_tag=O5C65_002779;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=HJH9172873.1;transl_table=11 DALFDA020000017.1 tpg gene 109152 110285 . - . ID=gene-O5C65_002780;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=O5C65_002780 DALFDA020000017.1 Protein Homology CDS 109152 110285 . - 0 ID=cds-HJH9172874.1;Parent=gene-O5C65_002780;Dbxref=NCBI_GP:HJH9172874.1;Name=HJH9172874.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459630.1;locus_tag=O5C65_002780;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=HJH9172874.1;transl_table=11 DALFDA020000017.1 tpg gene 110296 111408 . - . ID=gene-O5C65_002781;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=O5C65_002781 DALFDA020000017.1 Protein Homology CDS 110296 111408 . - 0 ID=cds-HJH9172875.1;Parent=gene-O5C65_002781;Dbxref=NCBI_GP:HJH9172875.1;Name=HJH9172875.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=O5C65_002781;product=peptidoglycan glycosyltransferase MrdB;protein_id=HJH9172875.1;transl_table=11 DALFDA020000017.1 tpg gene 111411 113312 . - . ID=gene-O5C65_002782;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=O5C65_002782 DALFDA020000017.1 Protein Homology CDS 111411 113312 . - 0 ID=cds-HJH9172876.1;Parent=gene-O5C65_002782;Dbxref=NCBI_GP:HJH9172876.1;Name=HJH9172876.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459632.1;locus_tag=O5C65_002782;product=peptidoglycan DD-transpeptidase MrdA;protein_id=HJH9172876.1;transl_table=11 DALFDA020000017.1 tpg gene 113343 113810 . - . ID=gene-O5C65_002783;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=O5C65_002783 DALFDA020000017.1 Protein Homology CDS 113343 113810 . - 0 ID=cds-HJH9172877.1;Parent=gene-O5C65_002783;Dbxref=NCBI_GP:HJH9172877.1;Name=HJH9172877.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=O5C65_002783;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=HJH9172877.1;transl_table=11 DALFDA020000017.1 tpg gene 113814 114131 . - . ID=gene-O5C65_002784;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=O5C65_002784 DALFDA020000017.1 Protein Homology CDS 113814 114131 . - 0 ID=cds-HJH9172878.1;Parent=gene-O5C65_002784;Dbxref=NCBI_GP:HJH9172878.1;Name=HJH9172878.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=O5C65_002784;product=ribosome silencing factor;protein_id=HJH9172878.1;transl_table=11 DALFDA020000017.1 tpg gene 114460 115068 . - . ID=gene-O5C65_002785;Name=O5C65_002785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002785 DALFDA020000017.1 Protein Homology CDS 114460 115068 . - 0 ID=cds-HJH9172879.1;Parent=gene-O5C65_002785;Dbxref=NCBI_GP:HJH9172879.1;Name=HJH9172879.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459635.1;locus_tag=O5C65_002785;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=HJH9172879.1;transl_table=11 DALFDA020000017.1 tpg gene 115165 116259 . + . ID=gene-O5C65_002786;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=O5C65_002786 DALFDA020000017.1 Protein Homology CDS 115165 116259 . + 0 ID=cds-HJH9172880.1;Parent=gene-O5C65_002786;Dbxref=NCBI_GP:HJH9172880.1;Name=HJH9172880.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;gene=cobD;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459636.1;locus_tag=O5C65_002786;product=threonine-phosphate decarboxylase CobD;protein_id=HJH9172880.1;transl_table=11 DALFDA020000017.1 tpg gene 116234 116875 . - . ID=gene-O5C65_002787;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=O5C65_002787 DALFDA020000017.1 Protein Homology CDS 116234 116875 . - 0 ID=cds-HJH9172881.1;Parent=gene-O5C65_002787;Dbxref=NCBI_GP:HJH9172881.1;Name=HJH9172881.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459637.1;locus_tag=O5C65_002787;product=nicotinate-nucleotide adenylyltransferase;protein_id=HJH9172881.1;transl_table=11 DALFDA020000017.1 tpg gene 116877 117908 . - . ID=gene-O5C65_002788;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=O5C65_002788 DALFDA020000017.1 Protein Homology CDS 116877 117908 . - 0 ID=cds-HJH9172882.1;Parent=gene-O5C65_002788;Dbxref=NCBI_GP:HJH9172882.1;Name=HJH9172882.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459638.1;locus_tag=O5C65_002788;product=DNA polymerase III subunit delta;protein_id=HJH9172882.1;transl_table=11 DALFDA020000017.1 tpg gene 117908 118498 . - . ID=gene-O5C65_002789;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=O5C65_002789 DALFDA020000017.1 Protein Homology CDS 117908 118498 . - 0 ID=cds-HJH9172883.1;Parent=gene-O5C65_002789;Dbxref=NCBI_GP:HJH9172883.1;Name=HJH9172883.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459639.1;locus_tag=O5C65_002789;product=LPS assembly lipoprotein LptE;protein_id=HJH9172883.1;transl_table=11 DALFDA020000017.1 tpg gene 118513 119689 . - . ID=gene-O5C65_002790;Name=O5C65_002790;end_range=119689,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002790;partial=true DALFDA020000017.1 Protein Homology CDS 118513 119689 . - 1 ID=cds-HJH9172884.1;Parent=gene-O5C65_002790;Dbxref=NCBI_GP:HJH9172884.1;Name=HJH9172884.1;Ontology_term=GO:0006418,GO:0004812;end_range=119689,.;gbkey=CDS;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=O5C65_002790;partial=true;product=class I tRNA ligase family protein;protein_id=HJH9172884.1;transl_table=11 ##sequence-region DALFDA020000018.1 1 118439 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000018.1 tpg region 1 118439 . + . ID=DALFDA020000018.1:1..118439;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000018.1 tpg gene 1 89 . + . ID=gene-O5C65_002791;Name=O5C65_002791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002791;partial=true;start_range=.,1 DALFDA020000018.1 Protein Homology CDS 1 89 . + 2 ID=cds-HJH9172885.1;Parent=gene-O5C65_002791;Dbxref=NCBI_GP:HJH9172885.1;Name=HJH9172885.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=O5C65_002791;partial=true;product=IS3 family transposase;protein_id=HJH9172885.1;start_range=.,1;transl_table=11 DALFDA020000018.1 tpg gene 227 1006 . - . ID=gene-O5C65_002792;Name=O5C65_002792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002792 DALFDA020000018.1 Protein Homology CDS 227 1006 . - 0 ID=cds-HJH9172886.1;Parent=gene-O5C65_002792;Dbxref=NCBI_GP:HJH9172886.1;Name=HJH9172886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000686692.1;locus_tag=O5C65_002792;product=hypothetical protein;protein_id=HJH9172886.1;transl_table=11 DALFDA020000018.1 tpg gene 1274 1552 . + . ID=gene-O5C65_002793;Name=O5C65_002793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002793 DALFDA020000018.1 Protein Homology CDS 1274 1552 . + 0 ID=cds-HJH9172887.1;Parent=gene-O5C65_002793;Dbxref=NCBI_GP:HJH9172887.1;Name=HJH9172887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675348.1;locus_tag=O5C65_002793;product=hypothetical protein;protein_id=HJH9172887.1;transl_table=11 DALFDA020000018.1 tpg gene 1549 1926 . + . ID=gene-O5C65_002794;Name=O5C65_002794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002794 DALFDA020000018.1 Protein Homology CDS 1549 1926 . + 0 ID=cds-HJH9172888.1;Parent=gene-O5C65_002794;Dbxref=NCBI_GP:HJH9172888.1;Name=HJH9172888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574179.1;locus_tag=O5C65_002794;product=hypothetical protein;protein_id=HJH9172888.1;transl_table=11 DALFDA020000018.1 tpg gene 2466 2678 . + . ID=gene-O5C65_002795;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=O5C65_002795 DALFDA020000018.1 Protein Homology CDS 2466 2678 . + 0 ID=cds-HJH9172889.1;Parent=gene-O5C65_002795;Dbxref=NCBI_GP:HJH9172889.1;Name=HJH9172889.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460947.1;locus_tag=O5C65_002795;product=transcription antiterminator/RNA stability regulator CspE;protein_id=HJH9172889.1;transl_table=11 DALFDA020000018.1 tpg gene 2689 2877 . + . ID=gene-O5C65_002796;Name=O5C65_002796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002796 DALFDA020000018.1 Protein Homology CDS 2689 2877 . + 0 ID=cds-HJH9172890.1;Parent=gene-O5C65_002796;Dbxref=NCBI_GP:HJH9172890.1;Name=HJH9172890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518761.1;locus_tag=O5C65_002796;product=cold-shock protein;protein_id=HJH9172890.1;transl_table=11 DALFDA020000018.1 tpg gene 3137 4315 . - . ID=gene-O5C65_002797;Name=ompS1;gbkey=Gene;gene=ompS1;gene_biotype=protein_coding;locus_tag=O5C65_002797 DALFDA020000018.1 Protein Homology CDS 3137 4315 . - 0 ID=cds-HJH9172891.1;Parent=gene-O5C65_002797;Dbxref=NCBI_GP:HJH9172891.1;Name=HJH9172891.1;gbkey=CDS;gene=ompS1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460946.1;locus_tag=O5C65_002797;product=porin OmpS1;protein_id=HJH9172891.1;transl_table=11 DALFDA020000018.1 tpg gene 4965 5276 . + . ID=gene-O5C65_002798;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=O5C65_002798 DALFDA020000018.1 Protein Homology CDS 4965 5276 . + 0 ID=cds-HJH9172892.1;Parent=gene-O5C65_002798;Dbxref=NCBI_GP:HJH9172892.1;Name=HJH9172892.1;Ontology_term=GO:0051301;gbkey=CDS;gene=drpB;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460945.1;locus_tag=O5C65_002798;product=cell division protein DrpB;protein_id=HJH9172892.1;transl_table=11 DALFDA020000018.1 tpg gene 5356 6051 . + . ID=gene-O5C65_002799;Name=O5C65_002799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002799 DALFDA020000018.1 Protein Homology CDS 5356 6051 . + 0 ID=cds-HJH9172893.1;Parent=gene-O5C65_002799;Dbxref=NCBI_GP:HJH9172893.1;Name=HJH9172893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460944.1;locus_tag=O5C65_002799;product=phosphohydrolase;protein_id=HJH9172893.1;transl_table=11 DALFDA020000018.1 tpg gene 6125 7555 . + . ID=gene-O5C65_002800;Name=O5C65_002800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002800 DALFDA020000018.1 Protein Homology CDS 6125 7555 . + 0 ID=cds-HJH9172894.1;Parent=gene-O5C65_002800;Dbxref=NCBI_GP:HJH9172894.1;Name=HJH9172894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460943.1;locus_tag=O5C65_002800;product=DNA cytosine methyltransferase;protein_id=HJH9172894.1;transl_table=11 DALFDA020000018.1 tpg gene 7536 8006 . + . ID=gene-O5C65_002801;Name=O5C65_002801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002801 DALFDA020000018.1 Protein Homology CDS 7536 8006 . + 0 ID=cds-HJH9172895.1;Parent=gene-O5C65_002801;Dbxref=NCBI_GP:HJH9172895.1;Name=HJH9172895.1;Ontology_term=GO:0006298,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460942.1;locus_tag=O5C65_002801;product=very short patch repair endonuclease;protein_id=HJH9172895.1;transl_table=11 DALFDA020000018.1 tpg gene 7995 8915 . - . ID=gene-O5C65_002802;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=O5C65_002802 DALFDA020000018.1 Protein Homology CDS 7995 8915 . - 0 ID=cds-HJH9172896.1;Parent=gene-O5C65_002802;Dbxref=NCBI_GP:HJH9172896.1;Name=HJH9172896.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460941.1;locus_tag=O5C65_002802;product=drug/metabolite exporter YedA;protein_id=HJH9172896.1;transl_table=11 DALFDA020000018.1 tpg gene 9085 10002 . + . ID=gene-O5C65_002803;Name=O5C65_002803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002803 DALFDA020000018.1 Protein Homology CDS 9085 10002 . + 0 ID=cds-HJH9172897.1;Parent=gene-O5C65_002803;Dbxref=NCBI_GP:HJH9172897.1;Name=HJH9172897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=O5C65_002803;product=DUF808 domain-containing protein;protein_id=HJH9172897.1;transl_table=11 DALFDA020000018.1 tpg gene 10079 10264 . + . ID=gene-O5C65_002804;Name=O5C65_002804;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002804 DALFDA020000018.1 Protein Homology CDS 10079 10264 . + 0 ID=cds-HJH9172898.1;Parent=gene-O5C65_002804;Dbxref=NCBI_GP:HJH9172898.1;Name=HJH9172898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549490.1;locus_tag=O5C65_002804;product=YodC family protein;protein_id=HJH9172898.1;transl_table=11 DALFDA020000018.1 tpg gene 10429 12141 . + . ID=gene-O5C65_002805;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=O5C65_002805 DALFDA020000018.1 Protein Homology CDS 10429 12141 . + 0 ID=cds-HJH9172899.1;Parent=gene-O5C65_002805;Dbxref=NCBI_GP:HJH9172899.1;Name=HJH9172899.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460938.1;locus_tag=O5C65_002805;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=HJH9172899.1;transl_table=11 DALFDA020000018.1 tpg gene 12120 12935 . - . ID=gene-O5C65_002806;Name=O5C65_002806;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002806 DALFDA020000018.1 Protein Homology CDS 12120 12935 . - 0 ID=cds-HJH9172900.1;Parent=gene-O5C65_002806;Dbxref=NCBI_GP:HJH9172900.1;Name=HJH9172900.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460937.1;locus_tag=O5C65_002806;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=HJH9172900.1;transl_table=11 DALFDA020000018.1 tpg gene 13245 13472 . - . ID=gene-O5C65_002807;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=O5C65_002807 DALFDA020000018.1 Protein Homology CDS 13245 13472 . - 0 ID=cds-HJH9172901.1;Parent=gene-O5C65_002807;Dbxref=NCBI_GP:HJH9172901.1;Name=HJH9172901.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460936.1;locus_tag=O5C65_002807;product=YodD family peroxide/acid resistance protein;protein_id=HJH9172901.1;transl_table=11 DALFDA020000018.1 tpg gene 13601 13795 . + . ID=gene-O5C65_002808;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=O5C65_002808 DALFDA020000018.1 Protein Homology CDS 13601 13795 . + 0 ID=cds-HJH9172902.1;Parent=gene-O5C65_002808;Dbxref=NCBI_GP:HJH9172902.1;Name=HJH9172902.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736680.1;locus_tag=O5C65_002808;product=protein DsrB;protein_id=HJH9172902.1;transl_table=11 DALFDA020000018.1 tpg gene 13834 14457 . - . ID=gene-O5C65_002809;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=O5C65_002809 DALFDA020000018.1 Protein Homology CDS 13834 14457 . - 0 ID=cds-HJH9172903.1;Parent=gene-O5C65_002809;Dbxref=NCBI_GP:HJH9172903.1;Name=HJH9172903.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460935.1;locus_tag=O5C65_002809;product=transcriptional regulator RcsA;protein_id=HJH9172903.1;transl_table=11 DALFDA020000018.1 tpg gene 14739 15533 . - . ID=gene-O5C65_002810;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=O5C65_002810 DALFDA020000018.1 Protein Homology CDS 14739 15533 . - 0 ID=cds-HJH9172904.1;Parent=gene-O5C65_002810;Dbxref=NCBI_GP:HJH9172904.1;Name=HJH9172904.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460934.1;locus_tag=O5C65_002810;product=flagellar biosynthetic protein FliR;protein_id=HJH9172904.1;transl_table=11 DALFDA020000018.1 tpg gene 15542 15811 . - . ID=gene-O5C65_002811;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=O5C65_002811 DALFDA020000018.1 Protein Homology CDS 15542 15811 . - 0 ID=cds-HJH9172905.1;Parent=gene-O5C65_002811;Dbxref=NCBI_GP:HJH9172905.1;Name=HJH9172905.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=O5C65_002811;product=flagellar biosynthesis protein FliQ;protein_id=HJH9172905.1;transl_table=11 DALFDA020000018.1 tpg gene 15821 16558 . - . ID=gene-O5C65_002812;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=O5C65_002812 DALFDA020000018.1 Protein Homology CDS 15821 16558 . - 0 ID=cds-HJH9172906.1;Parent=gene-O5C65_002812;Dbxref=NCBI_GP:HJH9172906.1;Name=HJH9172906.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460932.1;locus_tag=O5C65_002812;product=flagellar type III secretion system pore protein FliP;protein_id=HJH9172906.1;transl_table=11 DALFDA020000018.1 tpg gene 16558 16935 . - . ID=gene-O5C65_002813;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=O5C65_002813 DALFDA020000018.1 Protein Homology CDS 16558 16935 . - 0 ID=cds-HJH9172907.1;Parent=gene-O5C65_002813;Dbxref=NCBI_GP:HJH9172907.1;Name=HJH9172907.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460931.3;locus_tag=O5C65_002813;product=flagellar biosynthetic protein FliO;protein_id=HJH9172907.1;transl_table=11 DALFDA020000018.1 tpg gene 16935 17348 . - . ID=gene-O5C65_002814;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=O5C65_002814 DALFDA020000018.1 Protein Homology CDS 16935 17348 . - 0 ID=cds-HJH9172908.1;Parent=gene-O5C65_002814;Dbxref=NCBI_GP:HJH9172908.1;Name=HJH9172908.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460930.1;locus_tag=O5C65_002814;product=flagellar motor switch protein FliN;protein_id=HJH9172908.1;transl_table=11 DALFDA020000018.1 tpg gene 17345 18349 . - . ID=gene-O5C65_002815;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=O5C65_002815 DALFDA020000018.1 Protein Homology CDS 17345 18349 . - 0 ID=cds-HJH9172909.1;Parent=gene-O5C65_002815;Dbxref=NCBI_GP:HJH9172909.1;Name=HJH9172909.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=O5C65_002815;product=flagellar motor switch protein FliM;protein_id=HJH9172909.1;transl_table=11 DALFDA020000018.1 tpg gene 18354 18821 . - . ID=gene-O5C65_002816;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=O5C65_002816 DALFDA020000018.1 Protein Homology CDS 18354 18821 . - 0 ID=cds-HJH9172910.1;Parent=gene-O5C65_002816;Dbxref=NCBI_GP:HJH9172910.1;Name=HJH9172910.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460928.1;locus_tag=O5C65_002816;product=flagellar basal body-associated protein FliL;protein_id=HJH9172910.1;transl_table=11 DALFDA020000018.1 tpg gene 18926 20149 . - . ID=gene-O5C65_002817;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=O5C65_002817 DALFDA020000018.1 Protein Homology CDS 18926 20149 . - 0 ID=cds-HJH9172911.1;Parent=gene-O5C65_002817;Dbxref=NCBI_GP:HJH9172911.1;Name=HJH9172911.1;Ontology_term=GO:0044780,GO:0009424;gbkey=CDS;gene=fliK;go_component=bacterial-type flagellum hook|0009424||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460927.1;locus_tag=O5C65_002817;product=flagellar hook length control protein FliK;protein_id=HJH9172911.1;transl_table=11 DALFDA020000018.1 tpg gene 20146 20589 . - . ID=gene-O5C65_002818;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=O5C65_002818 DALFDA020000018.1 Protein Homology CDS 20146 20589 . - 0 ID=cds-HJH9172912.1;Parent=gene-O5C65_002818;Dbxref=NCBI_GP:HJH9172912.1;Name=HJH9172912.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460926.1;locus_tag=O5C65_002818;product=flagellar export protein FliJ;protein_id=HJH9172912.1;transl_table=11 DALFDA020000018.1 tpg gene 20611 21981 . - . ID=gene-O5C65_002819;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=O5C65_002819 DALFDA020000018.1 Protein Homology CDS 20611 21981 . - 0 ID=cds-HJH9172913.1;Parent=gene-O5C65_002819;Dbxref=NCBI_GP:HJH9172913.1;Name=HJH9172913.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460925.1;locus_tag=O5C65_002819;product=flagellar protein export ATPase FliI;protein_id=HJH9172913.1;transl_table=11 DALFDA020000018.1 tpg gene 21981 22688 . - . ID=gene-O5C65_002820;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=O5C65_002820 DALFDA020000018.1 Protein Homology CDS 21981 22688 . - 0 ID=cds-HJH9172914.1;Parent=gene-O5C65_002820;Dbxref=NCBI_GP:HJH9172914.1;Name=HJH9172914.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460924.1;locus_tag=O5C65_002820;product=flagellar assembly protein FliH;protein_id=HJH9172914.1;transl_table=11 DALFDA020000018.1 tpg gene 22681 23676 . - . ID=gene-O5C65_002821;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=O5C65_002821 DALFDA020000018.1 Protein Homology CDS 22681 23676 . - 0 ID=cds-HJH9172915.1;Parent=gene-O5C65_002821;Dbxref=NCBI_GP:HJH9172915.1;Name=HJH9172915.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460923.1;locus_tag=O5C65_002821;product=flagellar motor switch protein FliG;protein_id=HJH9172915.1;transl_table=11 DALFDA020000018.1 tpg gene 23669 25351 . - . ID=gene-O5C65_002822;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=O5C65_002822 DALFDA020000018.1 Protein Homology CDS 23669 25351 . - 0 ID=cds-HJH9172916.1;Parent=gene-O5C65_002822;Dbxref=NCBI_GP:HJH9172916.1;Name=HJH9172916.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460922.1;locus_tag=O5C65_002822;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=HJH9172916.1;transl_table=11 DALFDA020000018.1 tpg gene 25568 25882 . + . ID=gene-O5C65_002823;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=O5C65_002823 DALFDA020000018.1 Protein Homology CDS 25568 25882 . + 0 ID=cds-HJH9172917.1;Parent=gene-O5C65_002823;Dbxref=NCBI_GP:HJH9172917.1;Name=HJH9172917.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460921.1;locus_tag=O5C65_002823;product=flagellar hook-basal body complex protein FliE;protein_id=HJH9172917.1;transl_table=11 DALFDA020000018.1 tpg gene 26003 26389 . - . ID=gene-O5C65_002824;Name=O5C65_002824;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002824 DALFDA020000018.1 Protein Homology CDS 26003 26389 . - 0 ID=cds-HJH9172918.1;Parent=gene-O5C65_002824;Dbxref=NCBI_GP:HJH9172918.1;Name=HJH9172918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448379.1;locus_tag=O5C65_002824;product=hypothetical protein;protein_id=HJH9172918.1;transl_table=11 DALFDA020000018.1 tpg gene 26654 26887 . - . ID=gene-O5C65_002825;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=O5C65_002825 DALFDA020000018.1 Protein Homology CDS 26654 26887 . - 0 ID=cds-HJH9172919.1;Parent=gene-O5C65_002825;Dbxref=NCBI_GP:HJH9172919.1;Name=HJH9172919.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=O5C65_002825;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=HJH9172919.1;transl_table=11 DALFDA020000018.1 tpg gene 26884 28089 . - . ID=gene-O5C65_002826;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=O5C65_002826 DALFDA020000018.1 Protein Homology CDS 26884 28089 . - 0 ID=cds-HJH9172920.1;Parent=gene-O5C65_002826;Dbxref=NCBI_GP:HJH9172920.1;Name=HJH9172920.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156840.1;locus_tag=O5C65_002826;product=selenium metabolism membrane protein YedE/FdhT;protein_id=HJH9172920.1;transl_table=11 DALFDA020000018.1 tpg gene 28275 28688 . + . ID=gene-O5C65_002827;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=O5C65_002827 DALFDA020000018.1 Protein Homology CDS 28275 28688 . + 0 ID=cds-HJH9172921.1;Parent=gene-O5C65_002827;Dbxref=NCBI_GP:HJH9172921.1;Name=HJH9172921.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754699.1;locus_tag=O5C65_002827;product=lipoprotein YedD;protein_id=HJH9172921.1;transl_table=11 DALFDA020000018.1 tpg gene 28728 30212 . - . ID=gene-O5C65_002828;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=O5C65_002828 DALFDA020000018.1 Protein Homology CDS 28728 30212 . - 0 ID=cds-HJH9172922.1;Parent=gene-O5C65_002828;Dbxref=NCBI_GP:HJH9172922.1;Name=HJH9172922.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460916.1;locus_tag=O5C65_002828;product=alpha-amylase;protein_id=HJH9172922.1;transl_table=11 DALFDA020000018.1 tpg gene 30284 30652 . - . ID=gene-O5C65_002829;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=O5C65_002829 DALFDA020000018.1 Protein Homology CDS 30284 30652 . - 0 ID=cds-HJH9172923.1;Parent=gene-O5C65_002829;Dbxref=NCBI_GP:HJH9172923.1;Name=HJH9172923.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460915.1;locus_tag=O5C65_002829;product=flagella biosynthesis regulatory protein FliT;protein_id=HJH9172923.1;transl_table=11 DALFDA020000018.1 tpg gene 30652 31059 . - . ID=gene-O5C65_002830;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=O5C65_002830 DALFDA020000018.1 Protein Homology CDS 30652 31059 . - 0 ID=cds-HJH9172924.1;Parent=gene-O5C65_002830;Dbxref=NCBI_GP:HJH9172924.1;Name=HJH9172924.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460914.1;locus_tag=O5C65_002830;product=flagellar export chaperone FliS;protein_id=HJH9172924.1;transl_table=11 DALFDA020000018.1 tpg gene 31074 32477 . - . ID=gene-O5C65_002831;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=O5C65_002831 DALFDA020000018.1 Protein Homology CDS 31074 32477 . - 0 ID=cds-HJH9172925.1;Parent=gene-O5C65_002831;Dbxref=NCBI_GP:HJH9172925.1;Name=HJH9172925.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460913.1;locus_tag=O5C65_002831;product=flagellar filament capping protein FliD;protein_id=HJH9172925.1;transl_table=11 DALFDA020000018.1 tpg gene 32734 34254 . + . ID=gene-O5C65_002832;Name=O5C65_002832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002832 DALFDA020000018.1 Protein Homology CDS 32734 34254 . + 0 ID=cds-HJH9172926.1;Parent=gene-O5C65_002832;Dbxref=NCBI_GP:HJH9172926.1;Name=HJH9172926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461698.1;locus_tag=O5C65_002832;product=FliC/FljB family flagellin;protein_id=HJH9172926.1;transl_table=11 DALFDA020000018.1 tpg gene 34333 35538 . + . ID=gene-O5C65_002833;Name=fliB;gbkey=Gene;gene=fliB;gene_biotype=protein_coding;locus_tag=O5C65_002833 DALFDA020000018.1 Protein Homology CDS 34333 35538 . + 0 ID=cds-HJH9172927.1;Parent=gene-O5C65_002833;Dbxref=NCBI_GP:HJH9172927.1;Name=HJH9172927.1;gbkey=CDS;gene=fliB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460911.1;locus_tag=O5C65_002833;product=flagellin lysine-N-methylase;protein_id=HJH9172927.1;transl_table=11 DALFDA020000018.1 tpg gene 35735 36454 . + . ID=gene-O5C65_002834;Name=O5C65_002834;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002834 DALFDA020000018.1 Protein Homology CDS 35735 36454 . + 0 ID=cds-HJH9172928.1;Parent=gene-O5C65_002834;Dbxref=NCBI_GP:HJH9172928.1;Name=HJH9172928.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460909.1;locus_tag=O5C65_002834;product=RNA polymerase sigma factor FliA;protein_id=HJH9172928.1;transl_table=11 DALFDA020000018.1 tpg gene 36513 37064 . + . ID=gene-O5C65_002835;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=O5C65_002835 DALFDA020000018.1 Protein Homology CDS 36513 37064 . + 0 ID=cds-HJH9172929.1;Parent=gene-O5C65_002835;Dbxref=NCBI_GP:HJH9172929.1;Name=HJH9172929.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460908.1;locus_tag=O5C65_002835;product=flagella biosynthesis regulatory protein FliZ;protein_id=HJH9172929.1;transl_table=11 DALFDA020000018.1 tpg gene 37211 38011 . + . ID=gene-O5C65_002836;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=O5C65_002836 DALFDA020000018.1 Protein Homology CDS 37211 38011 . + 0 ID=cds-HJH9172930.1;Parent=gene-O5C65_002836;Dbxref=NCBI_GP:HJH9172930.1;Name=HJH9172930.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460907.1;locus_tag=O5C65_002836;product=cystine ABC transporter substrate-binding protein;protein_id=HJH9172930.1;transl_table=11 DALFDA020000018.1 tpg gene 38165 39151 . + . ID=gene-O5C65_002837;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=O5C65_002837 DALFDA020000018.1 Protein Homology CDS 38165 39151 . + 0 ID=cds-HJH9172931.1;Parent=gene-O5C65_002837;Dbxref=NCBI_GP:HJH9172931.1;Name=HJH9172931.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460906.1;locus_tag=O5C65_002837;product=D-cysteine desulfhydrase;protein_id=HJH9172931.1;transl_table=11 DALFDA020000018.1 tpg gene 39172 39840 . + . ID=gene-O5C65_002838;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=O5C65_002838 DALFDA020000018.1 Protein Homology CDS 39172 39840 . + 0 ID=cds-HJH9172932.1;Parent=gene-O5C65_002838;Dbxref=NCBI_GP:HJH9172932.1;Name=HJH9172932.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460905.1;locus_tag=O5C65_002838;product=cystine ABC transporter permease;protein_id=HJH9172932.1;transl_table=11 DALFDA020000018.1 tpg gene 39837 40589 . + . ID=gene-O5C65_002839;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=O5C65_002839 DALFDA020000018.1 Protein Homology CDS 39837 40589 . + 0 ID=cds-HJH9172933.1;Parent=gene-O5C65_002839;Dbxref=NCBI_GP:HJH9172933.1;Name=HJH9172933.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=tcyN;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460904.1;locus_tag=O5C65_002839;product=L-cystine ABC transporter ATP-binding protein TcyN;protein_id=HJH9172933.1;transl_table=11 DALFDA020000018.1 tpg gene 40821 41543 . + . ID=gene-O5C65_002840;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=O5C65_002840 DALFDA020000018.1 Protein Homology CDS 40821 41543 . + 0 ID=cds-HJH9172934.1;Parent=gene-O5C65_002840;Dbxref=NCBI_GP:HJH9172934.1;Name=HJH9172934.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460903.1;locus_tag=O5C65_002840;product=transcriptional regulator SdiA;protein_id=HJH9172934.1;transl_table=11 DALFDA020000018.1 tpg gene 41610 41834 . - . ID=gene-O5C65_002841;Name=O5C65_002841;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002841 DALFDA020000018.1 Protein Homology CDS 41610 41834 . - 0 ID=cds-HJH9172935.1;Parent=gene-O5C65_002841;Dbxref=NCBI_GP:HJH9172935.1;Name=HJH9172935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460902.1;locus_tag=O5C65_002841;product=DUF2594 family protein;protein_id=HJH9172935.1;transl_table=11 DALFDA020000018.1 tpg gene 41831 41986 . - . ID=gene-O5C65_002842;Name=O5C65_002842;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002842 DALFDA020000018.1 Protein Homology CDS 41831 41986 . - 0 ID=cds-HJH9172936.1;Parent=gene-O5C65_002842;Dbxref=NCBI_GP:HJH9172936.1;Name=HJH9172936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448360.1;locus_tag=O5C65_002842;product=hypothetical protein;protein_id=HJH9172936.1;transl_table=11 DALFDA020000018.1 tpg gene 42298 42954 . + . ID=gene-O5C65_002843;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=O5C65_002843 DALFDA020000018.1 Protein Homology CDS 42298 42954 . + 0 ID=cds-HJH9172937.1;Parent=gene-O5C65_002843;Dbxref=NCBI_GP:HJH9172937.1;Name=HJH9172937.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460900.1;locus_tag=O5C65_002843;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=HJH9172937.1;transl_table=11 DALFDA020000018.1 tpg gene 42951 44783 . + . ID=gene-O5C65_002844;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=O5C65_002844 DALFDA020000018.1 Protein Homology CDS 42951 44783 . + 0 ID=cds-HJH9172938.1;Parent=gene-O5C65_002844;Dbxref=NCBI_GP:HJH9172938.1;Name=HJH9172938.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460899.1;locus_tag=O5C65_002844;product=excinuclease ABC subunit UvrC;protein_id=HJH9172938.1;transl_table=11 DALFDA020000018.1 tpg gene 44840 45388 . + . ID=gene-O5C65_002845;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=O5C65_002845 DALFDA020000018.1 Protein Homology CDS 44840 45388 . + 0 ID=cds-HJH9172939.1;Parent=gene-O5C65_002845;Dbxref=NCBI_GP:HJH9172939.1;Name=HJH9172939.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460898.1;locus_tag=O5C65_002845;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=HJH9172939.1;transl_table=11 DALFDA020000018.1 tpg gene 45540 45615 . + . ID=gene-O5C65_002846;Name=O5C65_002846;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_002846 DALFDA020000018.1 tRNAscan-SE tRNA 45540 45615 . + . ID=rna-O5C65_002846;Parent=gene-O5C65_002846;anticodon=(pos:45573..45575);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_002846;product=tRNA-Gly DALFDA020000018.1 tRNAscan-SE exon 45540 45615 . + . ID=exon-O5C65_002846-1;Parent=rna-O5C65_002846;anticodon=(pos:45573..45575);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_002846;product=tRNA-Gly DALFDA020000018.1 tpg gene 45668 45741 . + . ID=gene-O5C65_002847;Name=O5C65_002847;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_002847 DALFDA020000018.1 tRNAscan-SE tRNA 45668 45741 . + . ID=rna-O5C65_002847;Parent=gene-O5C65_002847;anticodon=(pos:45700..45702);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_002847;product=tRNA-Cys DALFDA020000018.1 tRNAscan-SE exon 45668 45741 . + . ID=exon-O5C65_002847-1;Parent=rna-O5C65_002847;anticodon=(pos:45700..45702);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_002847;product=tRNA-Cys DALFDA020000018.1 tpg gene 45753 45839 . + . ID=gene-O5C65_002848;Name=O5C65_002848;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_002848 DALFDA020000018.1 tRNAscan-SE tRNA 45753 45839 . + . ID=rna-O5C65_002848;Parent=gene-O5C65_002848;anticodon=(pos:45787..45789);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_002848;product=tRNA-Leu DALFDA020000018.1 tRNAscan-SE exon 45753 45839 . + . ID=exon-O5C65_002848-1;Parent=rna-O5C65_002848;anticodon=(pos:45787..45789);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_002848;product=tRNA-Leu DALFDA020000018.1 tpg gene 46089 46421 . + . ID=gene-O5C65_002849;Name=O5C65_002849;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002849 DALFDA020000018.1 Protein Homology CDS 46089 46421 . + 0 ID=cds-HJH9172940.1;Parent=gene-O5C65_002849;Dbxref=NCBI_GP:HJH9172940.1;Name=HJH9172940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460897.1;locus_tag=O5C65_002849;product=hypothetical protein;protein_id=HJH9172940.1;transl_table=11 DALFDA020000018.1 tpg gene 46635 48074 . + . ID=gene-O5C65_002850;Name=O5C65_002850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002850 DALFDA020000018.1 Protein Homology CDS 46635 48074 . + 0 ID=cds-HJH9172941.1;Parent=gene-O5C65_002850;Dbxref=NCBI_GP:HJH9172941.1;Name=HJH9172941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460896.1;locus_tag=O5C65_002850;product=SH3 domain-containing protein;protein_id=HJH9172941.1;transl_table=11 DALFDA020000018.1 tpg gene 48287 48613 . + . ID=gene-O5C65_002851;Name=O5C65_002851;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002851 DALFDA020000018.1 Protein Homology CDS 48287 48613 . + 0 ID=cds-HJH9172942.1;Parent=gene-O5C65_002851;Dbxref=NCBI_GP:HJH9172942.1;Name=HJH9172942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460895.1;locus_tag=O5C65_002851;product=glucose-6-phosphate dehydrogenase;protein_id=HJH9172942.1;transl_table=11 DALFDA020000018.1 tpg gene 48852 49517 . + . ID=gene-O5C65_002852;Name=O5C65_002852;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002852 DALFDA020000018.1 Protein Homology CDS 48852 49517 . + 0 ID=cds-HJH9172943.1;Parent=gene-O5C65_002852;Dbxref=NCBI_GP:HJH9172943.1;Name=HJH9172943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460894.1;locus_tag=O5C65_002852;product=YecA family protein;protein_id=HJH9172943.1;transl_table=11 DALFDA020000018.1 tpg gene 49592 50803 . - . ID=gene-O5C65_002853;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=O5C65_002853 DALFDA020000018.1 Protein Homology CDS 49592 50803 . - 0 ID=cds-HJH9172944.1;Parent=gene-O5C65_002853;Dbxref=NCBI_GP:HJH9172944.1;Name=HJH9172944.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460893.1;locus_tag=O5C65_002853;product=tyrosine transporter TyrP;protein_id=HJH9172944.1;transl_table=11 DALFDA020000018.1 tpg gene 51030 51269 . + . ID=gene-O5C65_002854;Name=O5C65_002854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002854 DALFDA020000018.1 Protein Homology CDS 51030 51269 . + 0 ID=cds-HJH9172945.1;Parent=gene-O5C65_002854;Dbxref=NCBI_GP:HJH9172945.1;Name=HJH9172945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460892.1;locus_tag=O5C65_002854;product=YecH family metal-binding protein;protein_id=HJH9172945.1;transl_table=11 DALFDA020000018.1 tpg gene 51315 51812 . - . ID=gene-O5C65_002855;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=O5C65_002855 DALFDA020000018.1 Protein Homology CDS 51315 51812 . - 0 ID=cds-HJH9172946.1;Parent=gene-O5C65_002855;Dbxref=NCBI_GP:HJH9172946.1;Name=HJH9172946.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920608.1;locus_tag=O5C65_002855;product=non-heme ferritin;protein_id=HJH9172946.1;transl_table=11 DALFDA020000018.1 tpg gene 52052 52387 . - . ID=gene-O5C65_002856;Name=O5C65_002856;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002856 DALFDA020000018.1 Protein Homology CDS 52052 52387 . - 0 ID=cds-HJH9172947.1;Parent=gene-O5C65_002856;Dbxref=NCBI_GP:HJH9172947.1;Name=HJH9172947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460890.1;locus_tag=O5C65_002856;product=YecR-like lipofamily protein;protein_id=HJH9172947.1;transl_table=11 DALFDA020000018.1 tpg gene 52643 53281 . + . ID=gene-O5C65_002857;Name=O5C65_002857;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002857 DALFDA020000018.1 Protein Homology CDS 52643 53281 . + 0 ID=cds-HJH9172948.1;Parent=gene-O5C65_002857;Dbxref=NCBI_GP:HJH9172948.1;Name=HJH9172948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000684811.1;locus_tag=O5C65_002857;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=HJH9172948.1;transl_table=11 DALFDA020000018.1 tpg gene 53460 53963 . - . ID=gene-O5C65_002858;Name=O5C65_002858;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002858 DALFDA020000018.1 Protein Homology CDS 53460 53963 . - 0 ID=cds-HJH9172949.1;Parent=gene-O5C65_002858;Dbxref=NCBI_GP:HJH9172949.1;Name=HJH9172949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460888.1;locus_tag=O5C65_002858;product=non-heme ferritin-like protein;protein_id=HJH9172949.1;transl_table=11 DALFDA020000018.1 tpg gene 54514 55071 . + . ID=gene-O5C65_002859;Name=O5C65_002859;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002859 DALFDA020000018.1 Protein Homology CDS 54514 55071 . + 0 ID=cds-HJH9172950.1;Parent=gene-O5C65_002859;Dbxref=NCBI_GP:HJH9172950.1;Name=HJH9172950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460887.1;locus_tag=O5C65_002859;product=DJ-1/PfpI family protein;protein_id=HJH9172950.1;transl_table=11 DALFDA020000018.1 tpg pseudogene 55183 55365 . + . ID=gene-O5C65_002860;Name=araH;gbkey=Gene;gene=araH;gene_biotype=pseudogene;locus_tag=O5C65_002860;pseudo=true DALFDA020000018.1 Protein Homology CDS 55183 55365 . + 0 ID=cds-O5C65_002860;Parent=gene-O5C65_002860;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707790.1;locus_tag=O5C65_002860;product=L-arabinose ABC transporter permease AraH;pseudo=true;transl_table=11 DALFDA020000018.1 tpg gene 55588 56391 . + . ID=gene-O5C65_002861;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=O5C65_002861 DALFDA020000018.1 Protein Homology CDS 55588 56391 . + 0 ID=cds-HJH9172951.1;Parent=gene-O5C65_002861;Dbxref=NCBI_GP:HJH9172951.1;Name=HJH9172951.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460886.1;locus_tag=O5C65_002861;product=trehalose-phosphatase;protein_id=HJH9172951.1;transl_table=11 DALFDA020000018.1 tpg gene 56366 57787 . + . ID=gene-O5C65_002862;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=O5C65_002862 DALFDA020000018.1 Protein Homology CDS 56366 57787 . + 0 ID=cds-HJH9172952.1;Parent=gene-O5C65_002862;Dbxref=NCBI_GP:HJH9172952.1;Name=HJH9172952.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460885.1;locus_tag=O5C65_002862;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=HJH9172952.1;transl_table=11 DALFDA020000018.1 tpg gene 57805 58233 . - . ID=gene-O5C65_002863;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=O5C65_002863 DALFDA020000018.1 Protein Homology CDS 57805 58233 . - 0 ID=cds-HJH9172953.1;Parent=gene-O5C65_002863;Dbxref=NCBI_GP:HJH9172953.1;Name=HJH9172953.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460884.1;locus_tag=O5C65_002863;product=universal stress protein UspC;protein_id=HJH9172953.1;transl_table=11 DALFDA020000018.1 tpg gene 58230 58346 . - . ID=gene-O5C65_002864;Name=O5C65_002864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002864 DALFDA020000018.1 Protein Homology CDS 58230 58346 . - 0 ID=cds-HJH9172954.1;Parent=gene-O5C65_002864;Dbxref=NCBI_GP:HJH9172954.1;Name=HJH9172954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448342.1;locus_tag=O5C65_002864;product=hypothetical protein;protein_id=HJH9172954.1;transl_table=11 DALFDA020000018.1 tpg gene 59029 59370 . + . ID=gene-O5C65_002865;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=O5C65_002865 DALFDA020000018.1 Protein Homology CDS 59029 59370 . + 0 ID=cds-HJH9172955.1;Parent=gene-O5C65_002865;Dbxref=NCBI_GP:HJH9172955.1;Name=HJH9172955.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310629.2;locus_tag=O5C65_002865;product=flagellar transcriptional regulator FlhD;protein_id=HJH9172955.1;transl_table=11 DALFDA020000018.1 tpg gene 59367 59951 . + . ID=gene-O5C65_002866;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=O5C65_002866 DALFDA020000018.1 Protein Homology CDS 59367 59951 . + 0 ID=cds-HJH9172956.1;Parent=gene-O5C65_002866;Dbxref=NCBI_GP:HJH9172956.1;Name=HJH9172956.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460881.3;locus_tag=O5C65_002866;product=flagellar transcriptional regulator FlhC;protein_id=HJH9172956.1;transl_table=11 DALFDA020000018.1 tpg gene 60076 60963 . + . ID=gene-O5C65_002867;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=O5C65_002867 DALFDA020000018.1 Protein Homology CDS 60076 60963 . + 0 ID=cds-HJH9172957.1;Parent=gene-O5C65_002867;Dbxref=NCBI_GP:HJH9172957.1;Name=HJH9172957.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460880.1;locus_tag=O5C65_002867;product=flagellar motor stator protein MotA;protein_id=HJH9172957.1;transl_table=11 DALFDA020000018.1 tpg gene 60960 61889 . + . ID=gene-O5C65_002868;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=O5C65_002868 DALFDA020000018.1 Protein Homology CDS 60960 61889 . + 0 ID=cds-HJH9172958.1;Parent=gene-O5C65_002868;Dbxref=NCBI_GP:HJH9172958.1;Name=HJH9172958.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460879.1;locus_tag=O5C65_002868;product=flagellar motor protein MotB;protein_id=HJH9172958.1;transl_table=11 DALFDA020000018.1 tpg gene 61894 63909 . + . ID=gene-O5C65_002869;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=O5C65_002869 DALFDA020000018.1 Protein Homology CDS 61894 63909 . + 0 ID=cds-HJH9172959.1;Parent=gene-O5C65_002869;Dbxref=NCBI_GP:HJH9172959.1;Name=HJH9172959.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460878.1;locus_tag=O5C65_002869;product=chemotaxis protein CheA;protein_id=HJH9172959.1;transl_table=11 DALFDA020000018.1 tpg gene 63930 64433 . + . ID=gene-O5C65_002870;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=O5C65_002870 DALFDA020000018.1 Protein Homology CDS 63930 64433 . + 0 ID=cds-HJH9172960.1;Parent=gene-O5C65_002870;Dbxref=NCBI_GP:HJH9172960.1;Name=HJH9172960.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460877.1;locus_tag=O5C65_002870;product=chemotaxis protein CheW;protein_id=HJH9172960.1;transl_table=11 DALFDA020000018.1 tpg gene 64670 66331 . + . ID=gene-O5C65_002871;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=O5C65_002871 DALFDA020000018.1 Protein Homology CDS 64670 66331 . + 0 ID=cds-HJH9172961.1;Parent=gene-O5C65_002871;Dbxref=NCBI_GP:HJH9172961.1;Name=HJH9172961.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460876.1;locus_tag=O5C65_002871;product=methyl-accepting chemotaxis protein II;protein_id=HJH9172961.1;transl_table=11 DALFDA020000018.1 tpg gene 66485 67351 . + . ID=gene-O5C65_002872;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=O5C65_002872 DALFDA020000018.1 Protein Homology CDS 66485 67351 . + 0 ID=cds-HJH9172962.1;Parent=gene-O5C65_002872;Dbxref=NCBI_GP:HJH9172962.1;Name=HJH9172962.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460875.1;locus_tag=O5C65_002872;product=protein-glutamate O-methyltransferase CheR;protein_id=HJH9172962.1;transl_table=11 DALFDA020000018.1 tpg gene 67348 68397 . + . ID=gene-O5C65_002873;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=O5C65_002873 DALFDA020000018.1 Protein Homology CDS 67348 68397 . + 0 ID=cds-HJH9172963.1;Parent=gene-O5C65_002873;Dbxref=NCBI_GP:HJH9172963.1;Name=HJH9172963.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=O5C65_002873;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=HJH9172963.1;transl_table=11 DALFDA020000018.1 tpg gene 68415 68804 . + . ID=gene-O5C65_002874;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=O5C65_002874 DALFDA020000018.1 Protein Homology CDS 68415 68804 . + 0 ID=cds-HJH9172964.1;Parent=gene-O5C65_002874;Dbxref=NCBI_GP:HJH9172964.1;Name=HJH9172964.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=O5C65_002874;product=chemotaxis response regulator CheY;protein_id=HJH9172964.1;transl_table=11 DALFDA020000018.1 tpg gene 68815 69459 . + . ID=gene-O5C65_002875;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=O5C65_002875 DALFDA020000018.1 Protein Homology CDS 68815 69459 . + 0 ID=cds-HJH9172965.1;Parent=gene-O5C65_002875;Dbxref=NCBI_GP:HJH9172965.1;Name=HJH9172965.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460872.1;locus_tag=O5C65_002875;product=protein phosphatase CheZ;protein_id=HJH9172965.1;transl_table=11 DALFDA020000018.1 tpg gene 69653 70804 . + . ID=gene-O5C65_002876;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=O5C65_002876 DALFDA020000018.1 Protein Homology CDS 69653 70804 . + 0 ID=cds-HJH9172966.1;Parent=gene-O5C65_002876;Dbxref=NCBI_GP:HJH9172966.1;Name=HJH9172966.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460871.1;locus_tag=O5C65_002876;product=flagellar biosynthesis protein FlhB;protein_id=HJH9172966.1;transl_table=11 DALFDA020000018.1 tpg gene 70797 72875 . + . ID=gene-O5C65_002877;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=O5C65_002877 DALFDA020000018.1 Protein Homology CDS 70797 72875 . + 0 ID=cds-HJH9172967.1;Parent=gene-O5C65_002877;Dbxref=NCBI_GP:HJH9172967.1;Name=HJH9172967.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460870.1;locus_tag=O5C65_002877;product=flagellar biosynthesis protein FlhA;protein_id=HJH9172967.1;transl_table=11 DALFDA020000018.1 tpg gene 72875 73267 . + . ID=gene-O5C65_002878;Name=flhE;gbkey=Gene;gene=flhE;gene_biotype=protein_coding;locus_tag=O5C65_002878 DALFDA020000018.1 Protein Homology CDS 72875 73267 . + 0 ID=cds-HJH9172968.1;Parent=gene-O5C65_002878;Dbxref=NCBI_GP:HJH9172968.1;Name=HJH9172968.1;Ontology_term=GO:0044781;gbkey=CDS;gene=flhE;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460869.1;locus_tag=O5C65_002878;product=flagellar protein FlhE;protein_id=HJH9172968.1;transl_table=11 DALFDA020000018.1 tpg gene 73504 74643 . + . ID=gene-O5C65_002879;Name=O5C65_002879;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002879 DALFDA020000018.1 Protein Homology CDS 73504 74643 . + 0 ID=cds-HJH9172969.1;Parent=gene-O5C65_002879;Dbxref=NCBI_GP:HJH9172969.1;Name=HJH9172969.1;Ontology_term=GO:0005975,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460868.1;locus_tag=O5C65_002879;product=glycoside hydrolase family 88/105 protein;protein_id=HJH9172969.1;transl_table=11 DALFDA020000018.1 tpg gene 74697 76568 . - . ID=gene-O5C65_002880;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=O5C65_002880 DALFDA020000018.1 Protein Homology CDS 74697 76568 . - 0 ID=cds-HJH9172970.1;Parent=gene-O5C65_002880;Dbxref=NCBI_GP:HJH9172970.1;Name=HJH9172970.1;Ontology_term=GO:0009252,GO:0003824,GO:0008658,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=catalytic activity|0003824||IEA,penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460867.1;locus_tag=O5C65_002880;product=penicillin-binding protein 2;protein_id=HJH9172970.1;transl_table=11 DALFDA020000018.1 tpg gene 76757 78490 . - . ID=gene-O5C65_002881;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=O5C65_002881 DALFDA020000018.1 Protein Homology CDS 76757 78490 . - 0 ID=cds-HJH9172971.1;Parent=gene-O5C65_002881;Dbxref=NCBI_GP:HJH9172971.1;Name=HJH9172971.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=O5C65_002881;product=arginine--tRNA ligase;protein_id=HJH9172971.1;transl_table=11 DALFDA020000018.1 tpg gene 78727 79296 . + . ID=gene-O5C65_002882;Name=O5C65_002882;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002882 DALFDA020000018.1 Protein Homology CDS 78727 79296 . + 0 ID=cds-HJH9172972.1;Parent=gene-O5C65_002882;Dbxref=NCBI_GP:HJH9172972.1;Name=HJH9172972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460865.1;locus_tag=O5C65_002882;product=VOC family protein;protein_id=HJH9172972.1;transl_table=11 DALFDA020000018.1 tpg gene 79316 80062 . + . ID=gene-O5C65_002883;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=O5C65_002883 DALFDA020000018.1 Protein Homology CDS 79316 80062 . + 0 ID=cds-HJH9172973.1;Parent=gene-O5C65_002883;Dbxref=NCBI_GP:HJH9172973.1;Name=HJH9172973.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460864.1;locus_tag=O5C65_002883;product=copper homeostasis protein CutC;protein_id=HJH9172973.1;transl_table=11 DALFDA020000018.1 tpg gene 80298 81269 . - . ID=gene-O5C65_002884;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=O5C65_002884 DALFDA020000018.1 Protein Homology CDS 80298 81269 . - 0 ID=cds-HJH9172974.1;Parent=gene-O5C65_002884;Dbxref=NCBI_GP:HJH9172974.1;Name=HJH9172974.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460863.1;locus_tag=O5C65_002884;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=HJH9172974.1;transl_table=11 DALFDA020000018.1 tpg gene 81266 82009 . - . ID=gene-O5C65_002885;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=O5C65_002885 DALFDA020000018.1 Protein Homology CDS 81266 82009 . - 0 ID=cds-HJH9172975.1;Parent=gene-O5C65_002885;Dbxref=NCBI_GP:HJH9172975.1;Name=HJH9172975.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460862.1;locus_tag=O5C65_002885;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=HJH9172975.1;transl_table=11 DALFDA020000018.1 tpg gene 82050 82445 . - . ID=gene-O5C65_002886;Name=O5C65_002886;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002886 DALFDA020000018.1 Protein Homology CDS 82050 82445 . - 0 ID=cds-HJH9172976.1;Parent=gene-O5C65_002886;Dbxref=NCBI_GP:HJH9172976.1;Name=HJH9172976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460861.1;locus_tag=O5C65_002886;product=MAPEG family protein;protein_id=HJH9172976.1;transl_table=11 DALFDA020000018.1 tpg gene 82498 83316 . - . ID=gene-O5C65_002887;Name=O5C65_002887;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002887 DALFDA020000018.1 Protein Homology CDS 82498 83316 . - 0 ID=cds-HJH9172977.1;Parent=gene-O5C65_002887;Dbxref=NCBI_GP:HJH9172977.1;Name=HJH9172977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460860.1;locus_tag=O5C65_002887;product=DUF72 domain-containing protein;protein_id=HJH9172977.1;transl_table=11 DALFDA020000018.1 tpg gene 83313 83879 . - . ID=gene-O5C65_002888;Name=O5C65_002888;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002888 DALFDA020000018.1 Protein Homology CDS 83313 83879 . - 0 ID=cds-HJH9172978.1;Parent=gene-O5C65_002888;Dbxref=NCBI_GP:HJH9172978.1;Name=HJH9172978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460859.1;locus_tag=O5C65_002888;product=hydrolase;protein_id=HJH9172978.1;transl_table=11 DALFDA020000018.1 tpg gene 84204 85976 . + . ID=gene-O5C65_002889;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=O5C65_002889 DALFDA020000018.1 Protein Homology CDS 84204 85976 . + 0 ID=cds-HJH9172979.1;Parent=gene-O5C65_002889;Dbxref=NCBI_GP:HJH9172979.1;Name=HJH9172979.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460858.1;locus_tag=O5C65_002889;product=aspartate--tRNA ligase;protein_id=HJH9172979.1;transl_table=11 DALFDA020000018.1 tpg gene 86070 86522 . + . ID=gene-O5C65_002890;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=O5C65_002890 DALFDA020000018.1 Protein Homology CDS 86070 86522 . + 0 ID=cds-HJH9172980.1;Parent=gene-O5C65_002890;Dbxref=NCBI_GP:HJH9172980.1;Name=HJH9172980.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460857.1;locus_tag=O5C65_002890;product=dihydroneopterin triphosphate diphosphatase;protein_id=HJH9172980.1;transl_table=11 DALFDA020000018.1 tpg gene 86552 87292 . + . ID=gene-O5C65_002891;Name=O5C65_002891;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002891 DALFDA020000018.1 Protein Homology CDS 86552 87292 . + 0 ID=cds-HJH9172981.1;Parent=gene-O5C65_002891;Dbxref=NCBI_GP:HJH9172981.1;Name=HJH9172981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=O5C65_002891;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=HJH9172981.1;transl_table=11 DALFDA020000018.1 tpg gene 87329 87850 . + . ID=gene-O5C65_002892;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=O5C65_002892 DALFDA020000018.1 Protein Homology CDS 87329 87850 . + 0 ID=cds-HJH9172982.1;Parent=gene-O5C65_002892;Dbxref=NCBI_GP:HJH9172982.1;Name=HJH9172982.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=O5C65_002892;product=crossover junction endodeoxyribonuclease RuvC;protein_id=HJH9172982.1;transl_table=11 DALFDA020000018.1 tpg gene 87852 88451 . - . ID=gene-O5C65_002893;Name=O5C65_002893;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002893 DALFDA020000018.1 Protein Homology CDS 87852 88451 . - 0 ID=cds-HJH9172983.1;Parent=gene-O5C65_002893;Dbxref=NCBI_GP:HJH9172983.1;Name=HJH9172983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460854.1;locus_tag=O5C65_002893;product=YebB family permuted papain-like enzyme;protein_id=HJH9172983.1;transl_table=11 DALFDA020000018.1 tpg gene 88660 89352 . + . ID=gene-O5C65_002894;Name=O5C65_002894;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002894 DALFDA020000018.1 Protein Homology CDS 88660 89352 . + 0 ID=cds-HJH9172984.1;Parent=gene-O5C65_002894;Dbxref=NCBI_GP:HJH9172984.1;Name=HJH9172984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227317.1;locus_tag=O5C65_002894;product=hypothetical protein;protein_id=HJH9172984.1;transl_table=11 DALFDA020000018.1 tpg gene 89712 90323 . + . ID=gene-O5C65_002895;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=O5C65_002895 DALFDA020000018.1 Protein Homology CDS 89712 90323 . + 0 ID=cds-HJH9172985.1;Parent=gene-O5C65_002895;Dbxref=NCBI_GP:HJH9172985.1;Name=HJH9172985.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=O5C65_002895;product=Holliday junction branch migration protein RuvA;protein_id=HJH9172985.1;transl_table=11 DALFDA020000018.1 tpg gene 90332 91342 . + . ID=gene-O5C65_002896;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=O5C65_002896 DALFDA020000018.1 Protein Homology CDS 90332 91342 . + 0 ID=cds-HJH9172986.1;Parent=gene-O5C65_002896;Dbxref=NCBI_GP:HJH9172986.1;Name=HJH9172986.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460851.1;locus_tag=O5C65_002896;product=Holliday junction branch migration DNA helicase RuvB;protein_id=HJH9172986.1;transl_table=11 DALFDA020000018.1 tpg gene 91421 92206 . - . ID=gene-O5C65_002897;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=O5C65_002897 DALFDA020000018.1 Protein Homology CDS 91421 92206 . - 0 ID=cds-HJH9172987.1;Parent=gene-O5C65_002897;Dbxref=NCBI_GP:HJH9172987.1;Name=HJH9172987.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460850.1;locus_tag=O5C65_002897;product=zinc ABC transporter permease subunit ZnuB;protein_id=HJH9172987.1;transl_table=11 DALFDA020000018.1 tpg gene 92203 92958 . - . ID=gene-O5C65_002898;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=O5C65_002898 DALFDA020000018.1 Protein Homology CDS 92203 92958 . - 0 ID=cds-HJH9172988.1;Parent=gene-O5C65_002898;Dbxref=NCBI_GP:HJH9172988.1;Name=HJH9172988.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=O5C65_002898;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=HJH9172988.1;transl_table=11 DALFDA020000018.1 tpg gene 93037 93981 . + . ID=gene-O5C65_002899;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=O5C65_002899 DALFDA020000018.1 Protein Homology CDS 93037 93981 . + 0 ID=cds-HJH9172989.1;Parent=gene-O5C65_002899;Dbxref=NCBI_GP:HJH9172989.1;Name=HJH9172989.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=O5C65_002899;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=HJH9172989.1;transl_table=11 DALFDA020000018.1 tpg gene 93997 95316 . + . ID=gene-O5C65_002900;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=O5C65_002900 DALFDA020000018.1 Protein Homology CDS 93997 95316 . + 0 ID=cds-HJH9172990.1;Parent=gene-O5C65_002900;Dbxref=NCBI_GP:HJH9172990.1;Name=HJH9172990.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460847.1;locus_tag=O5C65_002900;product=murein DD-endopeptidase MepM;protein_id=HJH9172990.1;transl_table=11 DALFDA020000018.1 tpg gene 95433 96404 . + . ID=gene-O5C65_002901;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=O5C65_002901 DALFDA020000018.1 Protein Homology CDS 95433 96404 . + 0 ID=cds-HJH9172991.1;Parent=gene-O5C65_002901;Dbxref=NCBI_GP:HJH9172991.1;Name=HJH9172991.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460846.1;locus_tag=O5C65_002901;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=HJH9172991.1;transl_table=11 DALFDA020000018.1 tpg gene 96477 97919 . - . ID=gene-O5C65_002902;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=O5C65_002902 DALFDA020000018.1 Protein Homology CDS 96477 97919 . - 0 ID=cds-HJH9172992.1;Parent=gene-O5C65_002902;Dbxref=NCBI_GP:HJH9172992.1;Name=HJH9172992.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=O5C65_002902;product=pyruvate kinase;protein_id=HJH9172992.1;transl_table=11 DALFDA020000018.1 tpg gene 98043 98912 . - . ID=gene-O5C65_002903;Name=O5C65_002903;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002903 DALFDA020000018.1 Protein Homology CDS 98043 98912 . - 0 ID=cds-HJH9172993.1;Parent=gene-O5C65_002903;Dbxref=NCBI_GP:HJH9172993.1;Name=HJH9172993.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700,GO:0097367;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,carbohydrate derivative binding|0097367||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460844.1;locus_tag=O5C65_002903;product=MurR/RpiR family transcriptional regulator;protein_id=HJH9172993.1;transl_table=11 DALFDA020000018.1 tpg gene 99254 100729 . + . ID=gene-O5C65_002904;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=O5C65_002904 DALFDA020000018.1 Protein Homology CDS 99254 100729 . + 0 ID=cds-HJH9172994.1;Parent=gene-O5C65_002904;Dbxref=NCBI_GP:HJH9172994.1;Name=HJH9172994.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=O5C65_002904;product=glucose-6-phosphate dehydrogenase;protein_id=HJH9172994.1;transl_table=11 DALFDA020000018.1 tpg gene 100964 102775 . + . ID=gene-O5C65_002905;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=O5C65_002905 DALFDA020000018.1 Protein Homology CDS 100964 102775 . + 0 ID=cds-HJH9172995.1;Parent=gene-O5C65_002905;Dbxref=NCBI_GP:HJH9172995.1;Name=HJH9172995.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460842.1;locus_tag=O5C65_002905;product=phosphogluconate dehydratase;protein_id=HJH9172995.1;transl_table=11 DALFDA020000018.1 tpg gene 102813 103454 . + . ID=gene-O5C65_002906;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=O5C65_002906 DALFDA020000018.1 Protein Homology CDS 102813 103454 . + 0 ID=cds-HJH9172996.1;Parent=gene-O5C65_002906;Dbxref=NCBI_GP:HJH9172996.1;Name=HJH9172996.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460841.1;locus_tag=O5C65_002906;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=HJH9172996.1;transl_table=11 DALFDA020000018.1 tpg gene 103554 104732 . - . ID=gene-O5C65_002907;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=O5C65_002907 DALFDA020000018.1 Protein Homology CDS 103554 104732 . - 0 ID=cds-HJH9172997.1;Parent=gene-O5C65_002907;Dbxref=NCBI_GP:HJH9172997.1;Name=HJH9172997.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460840.1;locus_tag=O5C65_002907;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=HJH9172997.1;transl_table=11 DALFDA020000018.1 tpg gene 104863 105153 . + . ID=gene-O5C65_002908;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=O5C65_002908 DALFDA020000018.1 Protein Homology CDS 104863 105153 . + 0 ID=cds-HJH9172998.1;Parent=gene-O5C65_002908;Dbxref=NCBI_GP:HJH9172998.1;Name=HJH9172998.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460839.1;locus_tag=O5C65_002908;product=DNA damage-inducible protein YebG;protein_id=HJH9172998.1;transl_table=11 DALFDA020000018.1 tpg gene 105221 105574 . + . ID=gene-O5C65_002909;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=O5C65_002909 DALFDA020000018.1 Protein Homology CDS 105221 105574 . + 0 ID=cds-HJH9172999.1;Parent=gene-O5C65_002909;Dbxref=NCBI_GP:HJH9172999.1;Name=HJH9172999.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460838.1;locus_tag=O5C65_002909;product=protein YebF;protein_id=HJH9172999.1;transl_table=11 DALFDA020000018.1 tpg gene 105668 106327 . + . ID=gene-O5C65_002910;Name=O5C65_002910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002910 DALFDA020000018.1 Protein Homology CDS 105668 106327 . + 0 ID=cds-HJH9173000.1;Parent=gene-O5C65_002910;Dbxref=NCBI_GP:HJH9173000.1;Name=HJH9173000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460837.1;locus_tag=O5C65_002910;product=tellurite resistance TerB family protein;protein_id=HJH9173000.1;transl_table=11 DALFDA020000018.1 tpg gene 106540 108591 . + . ID=gene-O5C65_002911;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=O5C65_002911 DALFDA020000018.1 Protein Homology CDS 106540 108591 . + 0 ID=cds-HJH9173001.1;Parent=gene-O5C65_002911;Dbxref=NCBI_GP:HJH9173001.1;Name=HJH9173001.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460836.1;locus_tag=O5C65_002911;product=oligopeptidase B;protein_id=HJH9173001.1;transl_table=11 DALFDA020000018.1 tpg gene 108628 109326 . - . ID=gene-O5C65_002912;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=O5C65_002912 DALFDA020000018.1 Protein Homology CDS 108628 109326 . - 0 ID=cds-HJH9173002.1;Parent=gene-O5C65_002912;Dbxref=NCBI_GP:HJH9173002.1;Name=HJH9173002.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460835.1;locus_tag=O5C65_002912;product=exodeoxyribonuclease X;protein_id=HJH9173002.1;transl_table=11 DALFDA020000018.1 tpg gene 109350 110006 . - . ID=gene-O5C65_002913;Name=O5C65_002913;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002913 DALFDA020000018.1 Protein Homology CDS 109350 110006 . - 0 ID=cds-HJH9173003.1;Parent=gene-O5C65_002913;Dbxref=NCBI_GP:HJH9173003.1;Name=HJH9173003.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460834.1;locus_tag=O5C65_002913;product=nitrilase-related carbon-nitrogen hydrolase;protein_id=HJH9173003.1;transl_table=11 DALFDA020000018.1 tpg gene 110114 110344 . - . ID=gene-O5C65_002914;Name=O5C65_002914;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002914 DALFDA020000018.1 Protein Homology CDS 110114 110344 . - 0 ID=cds-HJH9173004.1;Parent=gene-O5C65_002914;Dbxref=NCBI_GP:HJH9173004.1;Name=HJH9173004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460833.1;locus_tag=O5C65_002914;product=DNA polymerase III subunit theta;protein_id=HJH9173004.1;transl_table=11 DALFDA020000018.1 tpg gene 110482 110856 . + . ID=gene-O5C65_002915;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=O5C65_002915 DALFDA020000018.1 Protein Homology CDS 110482 110856 . + 0 ID=cds-HJH9173005.1;Parent=gene-O5C65_002915;Dbxref=NCBI_GP:HJH9173005.1;Name=HJH9173005.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460832.1;locus_tag=O5C65_002915;product=CopC domain-containing protein YobA;protein_id=HJH9173005.1;transl_table=11 DALFDA020000018.1 tpg gene 110857 111732 . + . ID=gene-O5C65_002916;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=O5C65_002916 DALFDA020000018.1 Protein Homology CDS 110857 111732 . + 0 ID=cds-HJH9173006.1;Parent=gene-O5C65_002916;Dbxref=NCBI_GP:HJH9173006.1;Name=HJH9173006.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460831.1;locus_tag=O5C65_002916;product=copper homeostasis membrane protein CopD;protein_id=HJH9173006.1;transl_table=11 DALFDA020000018.1 tpg gene 111749 112102 . + . ID=gene-O5C65_002917;Name=O5C65_002917;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002917 DALFDA020000018.1 Protein Homology CDS 111749 112102 . + 0 ID=cds-HJH9173007.1;Parent=gene-O5C65_002917;Dbxref=NCBI_GP:HJH9173007.1;Name=HJH9173007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460830.1;locus_tag=O5C65_002917;product=YebY family protein;protein_id=HJH9173007.1;transl_table=11 DALFDA020000018.1 tpg pseudogene 112476 113319 . - . ID=gene-O5C65_002918;Name=O5C65_002918;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_002918;pseudo=true DALFDA020000018.1 Protein Homology CDS 112476 113319 . - 0 ID=cds-O5C65_002918;Parent=gene-O5C65_002918;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466154.1;locus_tag=O5C65_002918;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 DALFDA020000018.1 tpg pseudogene 113398 113733 . + . ID=gene-O5C65_002919;Name=O5C65_002919;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_002919;pseudo=true DALFDA020000018.1 Protein Homology CDS 113398 113733 . + 0 ID=cds-O5C65_002919;Parent=gene-O5C65_002919;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252716.1;locus_tag=O5C65_002919;product=hypothetical protein;pseudo=true;transl_table=11 DALFDA020000018.1 tpg pseudogene 113729 113933 . + . ID=gene-O5C65_002920;Name=O5C65_002920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_002920;pseudo=true DALFDA020000018.1 Protein Homology CDS 113729 113933 . + 0 ID=cds-O5C65_002920;Parent=gene-O5C65_002920;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461522.1;locus_tag=O5C65_002920;product=DUF1353 domain-containing protein;pseudo=true;transl_table=11 DALFDA020000018.1 tpg gene 113978 114199 . + . ID=gene-O5C65_002921;Name=O5C65_002921;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002921 DALFDA020000018.1 Protein Homology CDS 113978 114199 . + 0 ID=cds-HJH9173008.1;Parent=gene-O5C65_002921;Dbxref=NCBI_GP:HJH9173008.1;Name=HJH9173008.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025659.6;locus_tag=O5C65_002921;product=DUF4376 domain-containing protein;protein_id=HJH9173008.1;transl_table=11 DALFDA020000018.1 tpg pseudogene 114196 114267 . + . ID=gene-O5C65_002922;Name=O5C65_002922;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_002922;pseudo=true DALFDA020000018.1 Protein Homology CDS 114196 114267 . + 0 ID=cds-O5C65_002922;Parent=gene-O5C65_002922;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025659.6;locus_tag=O5C65_002922;product=DUF4376 domain-containing protein;pseudo=true;transl_table=11 DALFDA020000018.1 tpg gene 114373 114705 . + . ID=gene-O5C65_002923;Name=O5C65_002923;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002923 DALFDA020000018.1 Protein Homology CDS 114373 114705 . + 0 ID=cds-HJH9173009.1;Parent=gene-O5C65_002923;Dbxref=NCBI_GP:HJH9173009.1;Name=HJH9173009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000033280.1;locus_tag=O5C65_002923;product=DUF1353 domain-containing protein;protein_id=HJH9173009.1;transl_table=11 DALFDA020000018.1 tpg pseudogene 114754 114863 . + . ID=gene-O5C65_002924;Name=O5C65_002924;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_002924;pseudo=true DALFDA020000018.1 Protein Homology CDS 114754 114863 . + 0 ID=cds-O5C65_002924;Parent=gene-O5C65_002924;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461632.1;locus_tag=O5C65_002924;product=tail fiber assembly protein;pseudo=true;transl_table=11 DALFDA020000018.1 tpg gene 114954 115139 . - . ID=gene-O5C65_002925;Name=O5C65_002925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002925 DALFDA020000018.1 Protein Homology CDS 114954 115139 . - 0 ID=cds-HJH9173010.1;Parent=gene-O5C65_002925;Dbxref=NCBI_GP:HJH9173010.1;Name=HJH9173010.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026627.6;locus_tag=O5C65_002925;product=PagK family vesicle-borne virulence factor;protein_id=HJH9173010.1;transl_table=11 DALFDA020000018.1 tpg pseudogene 115383 115559 . - . ID=gene-O5C65_002926;Name=O5C65_002926;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_002926;pseudo=true DALFDA020000018.1 Protein Homology CDS 115383 115559 . - 0 ID=cds-O5C65_002926;Parent=gene-O5C65_002926;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421109.1;locus_tag=O5C65_002926;product=tail fiber assembly protein;pseudo=true;transl_table=11 DALFDA020000018.1 tpg gene 115576 116346 . - . ID=gene-O5C65_002927;Name=O5C65_002927;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002927 DALFDA020000018.1 Protein Homology CDS 115576 116346 . - 0 ID=cds-HJH9173011.1;Parent=gene-O5C65_002927;Dbxref=NCBI_GP:HJH9173011.1;Name=HJH9173011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750685.1;locus_tag=O5C65_002927;product=transporter substrate-binding domain-containing protein;protein_id=HJH9173011.1;transl_table=11 DALFDA020000018.1 tpg gene 116449 116514 . + . ID=gene-O5C65_002928;Name=O5C65_002928;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002928 DALFDA020000018.1 Protein Homology CDS 116449 116514 . + 0 ID=cds-HJH9173012.1;Parent=gene-O5C65_002928;Dbxref=NCBI_GP:HJH9173012.1;Name=HJH9173012.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024830.6;locus_tag=O5C65_002928;product=hypothetical protein;protein_id=HJH9173012.1;transl_table=11 DALFDA020000018.1 tpg pseudogene 116823 116965 . + . ID=gene-O5C65_002929;Name=O5C65_002929;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_002929;pseudo=true DALFDA020000018.1 Protein Homology CDS 116823 116965 . + 0 ID=cds-O5C65_002929;Parent=gene-O5C65_002929;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006673699.1;locus_tag=O5C65_002929;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 DALFDA020000018.1 tpg gene 116994 117794 . - . ID=gene-O5C65_002930;Name=O5C65_002930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002930 DALFDA020000018.1 Protein Homology CDS 116994 117794 . - 0 ID=cds-HJH9173013.1;Parent=gene-O5C65_002930;Dbxref=NCBI_GP:HJH9173013.1;Name=HJH9173013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000586172.1;locus_tag=O5C65_002930;product=hypothetical protein;protein_id=HJH9173013.1;transl_table=11 ##sequence-region DALFDA020000019.1 1 112622 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000019.1 tpg region 1 112622 . + . ID=DALFDA020000019.1:1..112622;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000019.1 tpg gene 181 804 . + . ID=gene-O5C65_002931;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=O5C65_002931 DALFDA020000019.1 Protein Homology CDS 181 804 . + 0 ID=cds-HJH9173014.1;Parent=gene-O5C65_002931;Dbxref=NCBI_GP:HJH9173014.1;Name=HJH9173014.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=O5C65_002931;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=HJH9173014.1;transl_table=11 DALFDA020000019.1 tpg gene 1056 2327 . + . ID=gene-O5C65_002932;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=O5C65_002932 DALFDA020000019.1 Protein Homology CDS 1056 2327 . + 0 ID=cds-HJH9173015.1;Parent=gene-O5C65_002932;Dbxref=NCBI_GP:HJH9173015.1;Name=HJH9173015.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=O5C65_002932;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=HJH9173015.1;transl_table=11 DALFDA020000019.1 tpg gene 2513 4867 . + . ID=gene-O5C65_002933;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=O5C65_002933 DALFDA020000019.1 Protein Homology CDS 2513 4867 . + 0 ID=cds-HJH9173016.1;Parent=gene-O5C65_002933;Dbxref=NCBI_GP:HJH9173016.1;Name=HJH9173016.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=O5C65_002933;product=endopeptidase La;protein_id=HJH9173016.1;transl_table=11 DALFDA020000019.1 tpg gene 5058 5348 . + . ID=gene-O5C65_002934;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=O5C65_002934 DALFDA020000019.1 Protein Homology CDS 5058 5348 . + 0 ID=cds-HJH9173017.1;Parent=gene-O5C65_002934;Dbxref=NCBI_GP:HJH9173017.1;Name=HJH9173017.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356995.1;locus_tag=O5C65_002934;product=nucleoid-associated protein HU-beta;protein_id=HJH9173017.1;transl_table=11 DALFDA020000019.1 tpg gene 5639 7510 . + . ID=gene-O5C65_002935;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=O5C65_002935 DALFDA020000019.1 Protein Homology CDS 5639 7510 . + 0 ID=cds-HJH9173018.1;Parent=gene-O5C65_002935;Dbxref=NCBI_GP:HJH9173018.1;Name=HJH9173018.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459448.1;locus_tag=O5C65_002935;product=peptidylprolyl isomerase;protein_id=HJH9173018.1;transl_table=11 DALFDA020000019.1 tpg gene 7660 8034 . + . ID=gene-O5C65_002936;Name=O5C65_002936;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002936 DALFDA020000019.1 Protein Homology CDS 7660 8034 . + 0 ID=cds-HJH9173019.1;Parent=gene-O5C65_002936;Dbxref=NCBI_GP:HJH9173019.1;Name=HJH9173019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459449.1;locus_tag=O5C65_002936;product=helix-hairpin-helix domain-containing protein;protein_id=HJH9173019.1;transl_table=11 DALFDA020000019.1 tpg gene 8138 8536 . + . ID=gene-O5C65_002937;Name=fadM;gbkey=Gene;gene=fadM;gene_biotype=protein_coding;locus_tag=O5C65_002937 DALFDA020000019.1 Protein Homology CDS 8138 8536 . + 0 ID=cds-HJH9173020.1;Parent=gene-O5C65_002937;Dbxref=NCBI_GP:HJH9173020.1;Name=HJH9173020.1;gbkey=CDS;gene=fadM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459450.1;locus_tag=O5C65_002937;product=long-chain acyl-CoA thioesterase FadM;protein_id=HJH9173020.1;transl_table=11 DALFDA020000019.1 tpg gene 8642 9337 . - . ID=gene-O5C65_002938;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=O5C65_002938 DALFDA020000019.1 Protein Homology CDS 8642 9337 . - 0 ID=cds-HJH9173021.1;Parent=gene-O5C65_002938;Dbxref=NCBI_GP:HJH9173021.1;Name=HJH9173021.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459451.1;locus_tag=O5C65_002938;product=7-cyano-7-deazaguanine synthase QueC;protein_id=HJH9173021.1;transl_table=11 DALFDA020000019.1 tpg gene 9402 11102 . - . ID=gene-O5C65_002939;Name=O5C65_002939;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002939 DALFDA020000019.1 Protein Homology CDS 9402 11102 . - 0 ID=cds-HJH9173022.1;Parent=gene-O5C65_002939;Dbxref=NCBI_GP:HJH9173022.1;Name=HJH9173022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459452.1;locus_tag=O5C65_002939;product=SgrR family transcriptional regulator;protein_id=HJH9173022.1;transl_table=11 DALFDA020000019.1 tpg gene 11203 12021 . + . ID=gene-O5C65_002940;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=O5C65_002940 DALFDA020000019.1 Protein Homology CDS 11203 12021 . + 0 ID=cds-HJH9173023.1;Parent=gene-O5C65_002940;Dbxref=NCBI_GP:HJH9173023.1;Name=HJH9173023.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459453.1;locus_tag=O5C65_002940;product=HMP-PP phosphatase;protein_id=HJH9173023.1;transl_table=11 DALFDA020000019.1 tpg gene 12070 13125 . - . ID=gene-O5C65_002941;Name=cdsH;gbkey=Gene;gene=cdsH;gene_biotype=protein_coding;locus_tag=O5C65_002941 DALFDA020000019.1 Protein Homology CDS 12070 13125 . - 0 ID=cds-HJH9173024.1;Parent=gene-O5C65_002941;Dbxref=NCBI_GP:HJH9173024.1;Name=HJH9173024.1;gbkey=CDS;gene=cdsH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459454.1;locus_tag=O5C65_002941;product=cysteine desulfhydrase;protein_id=HJH9173024.1;transl_table=11 DALFDA020000019.1 tpg gene 13238 13696 . + . ID=gene-O5C65_002942;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=O5C65_002942 DALFDA020000019.1 Protein Homology CDS 13238 13696 . + 0 ID=cds-HJH9173025.1;Parent=gene-O5C65_002942;Dbxref=NCBI_GP:HJH9173025.1;Name=HJH9173025.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459455.1;locus_tag=O5C65_002942;product=DNA-binding transcriptional regulator DecR;protein_id=HJH9173025.1;transl_table=11 DALFDA020000019.1 tpg gene 13737 15509 . + . ID=gene-O5C65_002943;Name=O5C65_002943;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002943 DALFDA020000019.1 Protein Homology CDS 13737 15509 . + 0 ID=cds-HJH9173026.1;Parent=gene-O5C65_002943;Dbxref=NCBI_GP:HJH9173026.1;Name=HJH9173026.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459456.1;locus_tag=O5C65_002943;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=HJH9173026.1;transl_table=11 DALFDA020000019.1 tpg gene 15502 17283 . + . ID=gene-O5C65_002944;Name=O5C65_002944;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002944 DALFDA020000019.1 Protein Homology CDS 15502 17283 . + 0 ID=cds-HJH9173027.1;Parent=gene-O5C65_002944;Dbxref=NCBI_GP:HJH9173027.1;Name=HJH9173027.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459457.1;locus_tag=O5C65_002944;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=HJH9173027.1;transl_table=11 DALFDA020000019.1 tpg gene 17496 17834 . + . ID=gene-O5C65_002945;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=O5C65_002945 DALFDA020000019.1 Protein Homology CDS 17496 17834 . + 0 ID=cds-HJH9173028.1;Parent=gene-O5C65_002945;Dbxref=NCBI_GP:HJH9173028.1;Name=HJH9173028.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459458.1;locus_tag=O5C65_002945;product=P-II family nitrogen regulator;protein_id=HJH9173028.1;transl_table=11 DALFDA020000019.1 tpg gene 17866 19152 . + . ID=gene-O5C65_002946;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=O5C65_002946 DALFDA020000019.1 Protein Homology CDS 17866 19152 . + 0 ID=cds-HJH9173029.1;Parent=gene-O5C65_002946;Dbxref=NCBI_GP:HJH9173029.1;Name=HJH9173029.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459459.1;locus_tag=O5C65_002946;product=ammonium transporter AmtB;protein_id=HJH9173029.1;transl_table=11 DALFDA020000019.1 tpg gene 19252 20112 . - . ID=gene-O5C65_002947;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=O5C65_002947 DALFDA020000019.1 Protein Homology CDS 19252 20112 . - 0 ID=cds-HJH9173030.1;Parent=gene-O5C65_002947;Dbxref=NCBI_GP:HJH9173030.1;Name=HJH9173030.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459460.1;locus_tag=O5C65_002947;product=acyl-CoA thioesterase II;protein_id=HJH9173030.1;transl_table=11 DALFDA020000019.1 tpg gene 20327 20896 . + . ID=gene-O5C65_002948;Name=O5C65_002948;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002948 DALFDA020000019.1 Protein Homology CDS 20327 20896 . + 0 ID=cds-HJH9173031.1;Parent=gene-O5C65_002948;Dbxref=NCBI_GP:HJH9173031.1;Name=HJH9173031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459461.1;locus_tag=O5C65_002948;product=YbaY family lipoprotein;protein_id=HJH9173031.1;transl_table=11 DALFDA020000019.1 tpg gene 20929 21318 . - . ID=gene-O5C65_002949;Name=O5C65_002949;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002949 DALFDA020000019.1 Protein Homology CDS 20929 21318 . - 0 ID=cds-HJH9173032.1;Parent=gene-O5C65_002949;Dbxref=NCBI_GP:HJH9173032.1;Name=HJH9173032.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459462.1;locus_tag=O5C65_002949;product=MGMT family protein;protein_id=HJH9173032.1;transl_table=11 DALFDA020000019.1 tpg gene 21403 21499 . + . ID=gene-O5C65_002950;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=O5C65_002950 DALFDA020000019.1 cmsearch SRP_RNA 21403 21499 . + . ID=rna-O5C65_002950;Parent=gene-O5C65_002950;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_002950;product=signal recognition particle sRNA small type DALFDA020000019.1 cmsearch exon 21403 21499 . + . ID=exon-O5C65_002950-1;Parent=rna-O5C65_002950;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_002950;product=signal recognition particle sRNA small type DALFDA020000019.1 tpg gene 21549 23099 . - . ID=gene-O5C65_002951;Name=O5C65_002951;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002951 DALFDA020000019.1 Protein Homology CDS 21549 23099 . - 0 ID=cds-HJH9173033.1;Parent=gene-O5C65_002951;Dbxref=NCBI_GP:HJH9173033.1;Name=HJH9173033.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459463.1;locus_tag=O5C65_002951;product=EAL domain-containing protein;protein_id=HJH9173033.1;transl_table=11 DALFDA020000019.1 tpg gene 23324 23587 . + . ID=gene-O5C65_002952;Name=O5C65_002952;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002952 DALFDA020000019.1 Protein Homology CDS 23324 23587 . + 0 ID=cds-HJH9173034.1;Parent=gene-O5C65_002952;Dbxref=NCBI_GP:HJH9173034.1;Name=HJH9173034.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801422.1;locus_tag=O5C65_002952;product=type B 50S ribosomal protein L31;protein_id=HJH9173034.1;transl_table=11 DALFDA020000019.1 tpg gene 23589 23729 . + . ID=gene-O5C65_002953;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=O5C65_002953 DALFDA020000019.1 Protein Homology CDS 23589 23729 . + 0 ID=cds-HJH9173035.1;Parent=gene-O5C65_002953;Dbxref=NCBI_GP:HJH9173035.1;Name=HJH9173035.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459465.1;locus_tag=O5C65_002953;product=type B 50S ribosomal protein L36;protein_id=HJH9173035.1;transl_table=11 DALFDA020000019.1 tpg gene 23786 24256 . - . ID=gene-O5C65_002954;Name=O5C65_002954;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002954 DALFDA020000019.1 Protein Homology CDS 23786 24256 . - 0 ID=cds-HJH9173036.1;Parent=gene-O5C65_002954;Dbxref=NCBI_GP:HJH9173036.1;Name=HJH9173036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459466.1;locus_tag=O5C65_002954;product=YlaC family protein;protein_id=HJH9173036.1;transl_table=11 DALFDA020000019.1 tpg gene 24374 24925 . - . ID=gene-O5C65_002955;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=O5C65_002955 DALFDA020000019.1 Protein Homology CDS 24374 24925 . - 0 ID=cds-HJH9173037.1;Parent=gene-O5C65_002955;Dbxref=NCBI_GP:HJH9173037.1;Name=HJH9173037.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459467.1;locus_tag=O5C65_002955;product=maltose O-acetyltransferase;protein_id=HJH9173037.1;transl_table=11 DALFDA020000019.1 tpg gene 25104 25322 . - . ID=gene-O5C65_002956;Name=O5C65_002956;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002956 DALFDA020000019.1 Protein Homology CDS 25104 25322 . - 0 ID=cds-HJH9173038.1;Parent=gene-O5C65_002956;Dbxref=NCBI_GP:HJH9173038.1;Name=HJH9173038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459468.1;locus_tag=O5C65_002956;product=HHA domain-containing protein;protein_id=HJH9173038.1;transl_table=11 DALFDA020000019.1 tpg gene 25350 25724 . - . ID=gene-O5C65_002957;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=O5C65_002957 DALFDA020000019.1 Protein Homology CDS 25350 25724 . - 0 ID=cds-HJH9173039.1;Parent=gene-O5C65_002957;Dbxref=NCBI_GP:HJH9173039.1;Name=HJH9173039.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=O5C65_002957;product=Hha toxicity modulator TomB;protein_id=HJH9173039.1;transl_table=11 DALFDA020000019.1 tpg gene 26220 29369 . - . ID=gene-O5C65_002958;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=O5C65_002958 DALFDA020000019.1 Protein Homology CDS 26220 29369 . - 0 ID=cds-HJH9173040.1;Parent=gene-O5C65_002958;Dbxref=NCBI_GP:HJH9173040.1;Name=HJH9173040.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459470.1;locus_tag=O5C65_002958;product=efflux RND transporter permease AcrB;protein_id=HJH9173040.1;transl_table=11 DALFDA020000019.1 tpg gene 29392 30585 . - . ID=gene-O5C65_002959;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=O5C65_002959 DALFDA020000019.1 Protein Homology CDS 29392 30585 . - 0 ID=cds-HJH9173041.1;Parent=gene-O5C65_002959;Dbxref=NCBI_GP:HJH9173041.1;Name=HJH9173041.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459471.1;locus_tag=O5C65_002959;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=HJH9173041.1;transl_table=11 DALFDA020000019.1 tpg gene 30727 31380 . + . ID=gene-O5C65_002960;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=O5C65_002960 DALFDA020000019.1 Protein Homology CDS 30727 31380 . + 0 ID=cds-HJH9173042.1;Parent=gene-O5C65_002960;Dbxref=NCBI_GP:HJH9173042.1;Name=HJH9173042.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459472.1;locus_tag=O5C65_002960;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=HJH9173042.1;transl_table=11 DALFDA020000019.1 tpg gene 31499 34861 . + . ID=gene-O5C65_002961;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=O5C65_002961 DALFDA020000019.1 Protein Homology CDS 31499 34861 . + 0 ID=cds-HJH9173043.1;Parent=gene-O5C65_002961;Dbxref=NCBI_GP:HJH9173043.1;Name=HJH9173043.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459473.1;locus_tag=O5C65_002961;product=mechanosensitive channel MscK;protein_id=HJH9173043.1;transl_table=11 DALFDA020000019.1 tpg gene 34903 35838 . - . ID=gene-O5C65_002962;Name=O5C65_002962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002962 DALFDA020000019.1 Protein Homology CDS 34903 35838 . - 0 ID=cds-HJH9173044.1;Parent=gene-O5C65_002962;Dbxref=NCBI_GP:HJH9173044.1;Name=HJH9173044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459474.1;locus_tag=O5C65_002962;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=HJH9173044.1;transl_table=11 DALFDA020000019.1 tpg gene 35908 36075 . - . ID=gene-O5C65_002963;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=O5C65_002963 DALFDA020000019.1 Protein Homology CDS 35908 36075 . - 0 ID=cds-HJH9173045.1;Parent=gene-O5C65_002963;Dbxref=NCBI_GP:HJH9173045.1;Name=HJH9173045.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459475.1;locus_tag=O5C65_002963;product=pleiotropic regulatory protein RsmS;protein_id=HJH9173045.1;transl_table=11 DALFDA020000019.1 tpg gene 36089 36616 . - . ID=gene-O5C65_002964;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=O5C65_002964 DALFDA020000019.1 Protein Homology CDS 36089 36616 . - 0 ID=cds-HJH9173046.1;Parent=gene-O5C65_002964;Dbxref=NCBI_GP:HJH9173046.1;Name=HJH9173046.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001454692.1;locus_tag=O5C65_002964;product=primosomal replication protein N'';protein_id=HJH9173046.1;transl_table=11 DALFDA020000019.1 tpg gene 36685 37062 . + . ID=gene-O5C65_002965;Name=O5C65_002965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002965 DALFDA020000019.1 Protein Homology CDS 36685 37062 . + 0 ID=cds-HJH9173047.1;Parent=gene-O5C65_002965;Dbxref=NCBI_GP:HJH9173047.1;Name=HJH9173047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459477.1;locus_tag=O5C65_002965;product=DUF454 family protein;protein_id=HJH9173047.1;transl_table=11 DALFDA020000019.1 tpg gene 37215 37766 . + . ID=gene-O5C65_002966;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=O5C65_002966 DALFDA020000019.1 Protein Homology CDS 37215 37766 . + 0 ID=cds-HJH9173048.1;Parent=gene-O5C65_002966;Dbxref=NCBI_GP:HJH9173048.1;Name=HJH9173048.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=O5C65_002966;product=adenine phosphoribosyltransferase;protein_id=HJH9173048.1;transl_table=11 DALFDA020000019.1 tpg gene 37880 39808 . + . ID=gene-O5C65_002967;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=O5C65_002967 DALFDA020000019.1 Protein Homology CDS 37880 39808 . + 0 ID=cds-HJH9173049.1;Parent=gene-O5C65_002967;Dbxref=NCBI_GP:HJH9173049.1;Name=HJH9173049.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459479.1;locus_tag=O5C65_002967;product=DNA polymerase III subunit gamma/tau;protein_id=HJH9173049.1;transl_table=11 DALFDA020000019.1 cmsearch sequence_feature 39141 39205 . + . ID=id-O5C65_002967;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_002967 DALFDA020000019.1 tpg gene 39854 40183 . + . ID=gene-O5C65_002968;Name=O5C65_002968;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002968 DALFDA020000019.1 Protein Homology CDS 39854 40183 . + 0 ID=cds-HJH9173050.1;Parent=gene-O5C65_002968;Dbxref=NCBI_GP:HJH9173050.1;Name=HJH9173050.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=O5C65_002968;product=YbaB/EbfC family nucleoid-associated protein;protein_id=HJH9173050.1;transl_table=11 DALFDA020000019.1 tpg gene 40183 40788 . + . ID=gene-O5C65_002969;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=O5C65_002969 DALFDA020000019.1 Protein Homology CDS 40183 40788 . + 0 ID=cds-HJH9173051.1;Parent=gene-O5C65_002969;Dbxref=NCBI_GP:HJH9173051.1;Name=HJH9173051.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459481.1;locus_tag=O5C65_002969;product=recombination mediator RecR;protein_id=HJH9173051.1;transl_table=11 DALFDA020000019.1 tpg gene 40899 42773 . + . ID=gene-O5C65_002970;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=O5C65_002970 DALFDA020000019.1 Protein Homology CDS 40899 42773 . + 0 ID=cds-HJH9173052.1;Parent=gene-O5C65_002970;Dbxref=NCBI_GP:HJH9173052.1;Name=HJH9173052.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=O5C65_002970;product=molecular chaperone HtpG;protein_id=HJH9173052.1;transl_table=11 DALFDA020000019.1 tpg gene 43189 43833 . + . ID=gene-O5C65_002971;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=O5C65_002971 DALFDA020000019.1 Protein Homology CDS 43189 43833 . + 0 ID=cds-HJH9173053.1;Parent=gene-O5C65_002971;Dbxref=NCBI_GP:HJH9173053.1;Name=HJH9173053.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=O5C65_002971;product=adenylate kinase;protein_id=HJH9173053.1;transl_table=11 DALFDA020000019.1 tpg gene 44062 45024 . + . ID=gene-O5C65_002972;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=O5C65_002972 DALFDA020000019.1 Protein Homology CDS 44062 45024 . + 0 ID=cds-HJH9173054.1;Parent=gene-O5C65_002972;Dbxref=NCBI_GP:HJH9173054.1;Name=HJH9173054.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459484.1;locus_tag=O5C65_002972;product=ferrochelatase;protein_id=HJH9173054.1;transl_table=11 DALFDA020000019.1 tpg gene 45021 45992 . - . ID=gene-O5C65_002973;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=O5C65_002973 DALFDA020000019.1 Protein Homology CDS 45021 45992 . - 0 ID=cds-HJH9173055.1;Parent=gene-O5C65_002973;Dbxref=NCBI_GP:HJH9173055.1;Name=HJH9173055.1;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459485.1;locus_tag=O5C65_002973;product=acetyl esterase;protein_id=HJH9173055.1;transl_table=11 DALFDA020000019.1 tpg gene 46145 47449 . + . ID=gene-O5C65_002974;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=O5C65_002974 DALFDA020000019.1 Protein Homology CDS 46145 47449 . + 0 ID=cds-HJH9173056.1;Parent=gene-O5C65_002974;Dbxref=NCBI_GP:HJH9173056.1;Name=HJH9173056.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459486.1;locus_tag=O5C65_002974;product=inosine/guanosine kinase;protein_id=HJH9173056.1;transl_table=11 DALFDA020000019.1 tpg gene 47498 49174 . - . ID=gene-O5C65_002975;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=O5C65_002975 DALFDA020000019.1 Protein Homology CDS 47498 49174 . - 0 ID=cds-HJH9173057.1;Parent=gene-O5C65_002975;Dbxref=NCBI_GP:HJH9173057.1;Name=HJH9173057.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459487.1;locus_tag=O5C65_002975;product=YbaL family putative K(+) efflux transporter;protein_id=HJH9173057.1;transl_table=11 DALFDA020000019.1 tpg gene 49389 50609 . - . ID=gene-O5C65_002976;Name=O5C65_002976;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002976 DALFDA020000019.1 Protein Homology CDS 49389 50609 . - 0 ID=cds-HJH9173058.1;Parent=gene-O5C65_002976;Dbxref=NCBI_GP:HJH9173058.1;Name=HJH9173058.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459488.1;locus_tag=O5C65_002976;product=MFS transporter;protein_id=HJH9173058.1;transl_table=11 DALFDA020000019.1 tpg gene 50782 52434 . + . ID=gene-O5C65_002977;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=O5C65_002977 DALFDA020000019.1 Protein Homology CDS 50782 52434 . + 0 ID=cds-HJH9173059.1;Parent=gene-O5C65_002977;Dbxref=NCBI_GP:HJH9173059.1;Name=HJH9173059.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459489.1;locus_tag=O5C65_002977;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=HJH9173059.1;transl_table=11 DALFDA020000019.1 tpg gene 52551 53030 . - . ID=gene-O5C65_002978;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=O5C65_002978 DALFDA020000019.1 Protein Homology CDS 52551 53030 . - 0 ID=cds-HJH9173060.1;Parent=gene-O5C65_002978;Dbxref=NCBI_GP:HJH9173060.1;Name=HJH9173060.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=O5C65_002978;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=HJH9173060.1;transl_table=11 DALFDA020000019.1 tpg gene 53232 54026 . - . ID=gene-O5C65_002979;Name=O5C65_002979;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002979 DALFDA020000019.1 Protein Homology CDS 53232 54026 . - 0 ID=cds-HJH9173061.1;Parent=gene-O5C65_002979;Dbxref=NCBI_GP:HJH9173061.1;Name=HJH9173061.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459491.1;locus_tag=O5C65_002979;product=TraB/GumN family protein;protein_id=HJH9173061.1;transl_table=11 DALFDA020000019.1 tpg gene 54112 54939 . - . ID=gene-O5C65_002980;Name=O5C65_002980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002980 DALFDA020000019.1 Protein Homology CDS 54112 54939 . - 0 ID=cds-HJH9173062.1;Parent=gene-O5C65_002980;Dbxref=NCBI_GP:HJH9173062.1;Name=HJH9173062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459492.1;locus_tag=O5C65_002980;product=lysozyme inhibitor LprI family protein;protein_id=HJH9173062.1;transl_table=11 DALFDA020000019.1 tpg gene 55096 57597 . - . ID=gene-O5C65_002981;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=O5C65_002981 DALFDA020000019.1 Protein Homology CDS 55096 57597 . - 0 ID=cds-HJH9173063.1;Parent=gene-O5C65_002981;Dbxref=NCBI_GP:HJH9173063.1;Name=HJH9173063.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459493.1;locus_tag=O5C65_002981;product=copper-exporting P-type ATPase CopA;protein_id=HJH9173063.1;transl_table=11 DALFDA020000019.1 tpg gene 57707 58123 . + . ID=gene-O5C65_002982;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=O5C65_002982 DALFDA020000019.1 Protein Homology CDS 57707 58123 . + 0 ID=cds-HJH9173064.1;Parent=gene-O5C65_002982;Dbxref=NCBI_GP:HJH9173064.1;Name=HJH9173064.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459494.1;locus_tag=O5C65_002982;product=Cu(I)-responsive transcriptional regulator;protein_id=HJH9173064.1;transl_table=11 DALFDA020000019.1 tpg gene 58124 58576 . - . ID=gene-O5C65_002983;Name=O5C65_002983;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002983 DALFDA020000019.1 Protein Homology CDS 58124 58576 . - 0 ID=cds-HJH9173065.1;Parent=gene-O5C65_002983;Dbxref=NCBI_GP:HJH9173065.1;Name=HJH9173065.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459495.1;locus_tag=O5C65_002983;product=NfeD family protein;protein_id=HJH9173065.1;transl_table=11 DALFDA020000019.1 tpg gene 58573 59490 . - . ID=gene-O5C65_002984;Name=O5C65_002984;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002984 DALFDA020000019.1 Protein Homology CDS 58573 59490 . - 0 ID=cds-HJH9173066.1;Parent=gene-O5C65_002984;Dbxref=NCBI_GP:HJH9173066.1;Name=HJH9173066.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459496.1;locus_tag=O5C65_002984;product=SPFH domain-containing protein;protein_id=HJH9173066.1;transl_table=11 DALFDA020000019.1 tpg gene 59637 60314 . + . ID=gene-O5C65_002985;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;gene_synonym=ybbL;locus_tag=O5C65_002985 DALFDA020000019.1 Protein Homology CDS 59637 60314 . + 0 ID=cds-HJH9173067.1;Parent=gene-O5C65_002985;Dbxref=NCBI_GP:HJH9173067.1;Name=HJH9173067.1;Ontology_term=GO:1903988,GO:0016887;gbkey=CDS;gene=fetA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459497.1;locus_tag=O5C65_002985;product=iron efflux ABC transporter ATP-binding subunit FetA;protein_id=HJH9173067.1;transl_table=11 DALFDA020000019.1 tpg gene 60301 61080 . + . ID=gene-O5C65_002986;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=O5C65_002986 DALFDA020000019.1 Protein Homology CDS 60301 61080 . + 0 ID=cds-HJH9173068.1;Parent=gene-O5C65_002986;Dbxref=NCBI_GP:HJH9173068.1;Name=HJH9173068.1;Ontology_term=GO:1903988,GO:0005886;gbkey=CDS;gene=fetB;go_component=plasma membrane|0005886||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459498.1;locus_tag=O5C65_002986;product=iron efflux ABC transporter permease subunit FetB;protein_id=HJH9173068.1;transl_table=11 DALFDA020000019.1 tpg gene 61166 62020 . - . ID=gene-O5C65_002987;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=O5C65_002987 DALFDA020000019.1 Protein Homology CDS 61166 62020 . - 0 ID=cds-HJH9173069.1;Parent=gene-O5C65_002987;Dbxref=NCBI_GP:HJH9173069.1;Name=HJH9173069.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459499.1;locus_tag=O5C65_002987;product=chaperedoxin;protein_id=HJH9173069.1;transl_table=11 DALFDA020000019.1 tpg gene 62080 62850 . - . ID=gene-O5C65_002988;Name=O5C65_002988;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002988 DALFDA020000019.1 Protein Homology CDS 62080 62850 . - 0 ID=cds-HJH9173070.1;Parent=gene-O5C65_002988;Dbxref=NCBI_GP:HJH9173070.1;Name=HJH9173070.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459500.1;locus_tag=O5C65_002988;product=SDR family oxidoreductase;protein_id=HJH9173070.1;transl_table=11 DALFDA020000019.1 tpg gene 63005 63619 . - . ID=gene-O5C65_002989;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=O5C65_002989 DALFDA020000019.1 Protein Homology CDS 63005 63619 . - 0 ID=cds-HJH9173071.1;Parent=gene-O5C65_002989;Dbxref=NCBI_GP:HJH9173071.1;Name=HJH9173071.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459501.1;locus_tag=O5C65_002989;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=HJH9173071.1;transl_table=11 DALFDA020000019.1 tpg gene 63590 64276 . + . ID=gene-O5C65_002990;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=O5C65_002990 DALFDA020000019.1 Protein Homology CDS 63590 64276 . + 0 ID=cds-HJH9173072.1;Parent=gene-O5C65_002990;Dbxref=NCBI_GP:HJH9173072.1;Name=HJH9173072.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459502.1;locus_tag=O5C65_002990;product=putative ABC transporter ATP-binding protein YbbA;protein_id=HJH9173072.1;transl_table=11 DALFDA020000019.1 tpg gene 64273 66687 . + . ID=gene-O5C65_002991;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=O5C65_002991 DALFDA020000019.1 Protein Homology CDS 64273 66687 . + 0 ID=cds-HJH9173073.1;Parent=gene-O5C65_002991;Dbxref=NCBI_GP:HJH9173073.1;Name=HJH9173073.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459503.1;locus_tag=O5C65_002991;product=putative ABC transporter permease subunit YbbP;protein_id=HJH9173073.1;transl_table=11 DALFDA020000019.1 tpg gene 66873 68006 . + . ID=gene-O5C65_002992;Name=O5C65_002992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002992 DALFDA020000019.1 Protein Homology CDS 66873 68006 . + 0 ID=cds-HJH9173074.1;Parent=gene-O5C65_002992;Dbxref=NCBI_GP:HJH9173074.1;Name=HJH9173074.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459504.1;locus_tag=O5C65_002992;product=porin;protein_id=HJH9173074.1;transl_table=11 DALFDA020000019.1 tpg gene 68263 69093 . + . ID=gene-O5C65_002993;Name=O5C65_002993;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002993 DALFDA020000019.1 Protein Homology CDS 68263 69093 . + 0 ID=cds-HJH9173075.1;Parent=gene-O5C65_002993;Dbxref=NCBI_GP:HJH9173075.1;Name=HJH9173075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459505.1;locus_tag=O5C65_002993;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=HJH9173075.1;transl_table=11 DALFDA020000019.1 tpg gene 69130 70146 . + . ID=gene-O5C65_002994;Name=sfbB;gbkey=Gene;gene=sfbB;gene_biotype=protein_coding;locus_tag=O5C65_002994 DALFDA020000019.1 Protein Homology CDS 69130 70146 . + 0 ID=cds-HJH9173076.1;Parent=gene-O5C65_002994;Dbxref=NCBI_GP:HJH9173076.1;Name=HJH9173076.1;gbkey=CDS;gene=sfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459506.1;locus_tag=O5C65_002994;product=virulence-associated ABC transporter ATP-binding protein SfbB;protein_id=HJH9173076.1;transl_table=11 DALFDA020000019.1 tpg gene 70139 70798 . + . ID=gene-O5C65_002995;Name=O5C65_002995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_002995 DALFDA020000019.1 Protein Homology CDS 70139 70798 . + 0 ID=cds-HJH9173077.1;Parent=gene-O5C65_002995;Dbxref=NCBI_GP:HJH9173077.1;Name=HJH9173077.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459507.1;locus_tag=O5C65_002995;product=methionine ABC transporter permease;protein_id=HJH9173077.1;transl_table=11 DALFDA020000019.1 tpg gene 70837 71931 . - . ID=gene-O5C65_002996;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=O5C65_002996 DALFDA020000019.1 Protein Homology CDS 70837 71931 . - 0 ID=cds-HJH9173078.1;Parent=gene-O5C65_002996;Dbxref=NCBI_GP:HJH9173078.1;Name=HJH9173078.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459508.1;locus_tag=O5C65_002996;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=HJH9173078.1;transl_table=11 DALFDA020000019.1 tpg gene 72001 72927 . - . ID=gene-O5C65_002997;Name=allS;gbkey=Gene;gene=allS;gene_biotype=protein_coding;locus_tag=O5C65_002997 DALFDA020000019.1 Protein Homology CDS 72001 72927 . - 0 ID=cds-HJH9173079.1;Parent=gene-O5C65_002997;Dbxref=NCBI_GP:HJH9173079.1;Name=HJH9173079.1;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459509.1;locus_tag=O5C65_002997;product=HTH-type transcriptional activator AllS;protein_id=HJH9173079.1;transl_table=11 DALFDA020000019.1 tpg gene 73154 73636 . + . ID=gene-O5C65_002998;Name=allA;gbkey=Gene;gene=allA;gene_biotype=protein_coding;locus_tag=O5C65_002998 DALFDA020000019.1 Protein Homology CDS 73154 73636 . + 0 ID=cds-HJH9173080.1;Parent=gene-O5C65_002998;Dbxref=NCBI_GP:HJH9173080.1;Name=HJH9173080.1;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459510.1;locus_tag=O5C65_002998;product=ureidoglycolate lyase;protein_id=HJH9173080.1;transl_table=11 DALFDA020000019.1 tpg gene 73715 74533 . + . ID=gene-O5C65_002999;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=O5C65_002999 DALFDA020000019.1 Protein Homology CDS 73715 74533 . + 0 ID=cds-HJH9173081.1;Parent=gene-O5C65_002999;Dbxref=NCBI_GP:HJH9173081.1;Name=HJH9173081.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459511.1;locus_tag=O5C65_002999;product=HTH-type transcriptional repressor AllR;protein_id=HJH9173081.1;transl_table=11 DALFDA020000019.1 tpg gene 74618 76399 . + . ID=gene-O5C65_003000;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=O5C65_003000 DALFDA020000019.1 Protein Homology CDS 74618 76399 . + 0 ID=cds-HJH9173082.1;Parent=gene-O5C65_003000;Dbxref=NCBI_GP:HJH9173082.1;Name=HJH9173082.1;Ontology_term=GO:0009436,GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;go_process=glyoxylate catabolic process|0009436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459512.1;locus_tag=O5C65_003000;product=glyoxylate carboligase;protein_id=HJH9173082.1;transl_table=11 DALFDA020000019.1 tpg gene 76412 77188 . + . ID=gene-O5C65_003001;Name=gip;gbkey=Gene;gene=gip;gene_biotype=protein_coding;locus_tag=O5C65_003001 DALFDA020000019.1 Protein Homology CDS 76412 77188 . + 0 ID=cds-HJH9173083.1;Parent=gene-O5C65_003001;Dbxref=NCBI_GP:HJH9173083.1;Name=HJH9173083.1;gbkey=CDS;gene=gip;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459513.1;locus_tag=O5C65_003001;product=hydroxypyruvate isomerase Gip;protein_id=HJH9173083.1;transl_table=11 DALFDA020000019.1 tpg gene 77289 78167 . + . ID=gene-O5C65_003002;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=O5C65_003002 DALFDA020000019.1 Protein Homology CDS 77289 78167 . + 0 ID=cds-HJH9173084.1;Parent=gene-O5C65_003002;Dbxref=NCBI_GP:HJH9173084.1;Name=HJH9173084.1;Ontology_term=GO:0046487,GO:0008679,GO:0051287;gbkey=CDS;gene=glxR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA,NAD binding|0051287||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459514.1;locus_tag=O5C65_003002;product=2-hydroxy-3-oxopropionate reductase;protein_id=HJH9173084.1;transl_table=11 DALFDA020000019.1 tpg gene 78233 79480 . + . ID=gene-O5C65_003003;Name=O5C65_003003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003003 DALFDA020000019.1 Protein Homology CDS 78233 79480 . + 0 ID=cds-HJH9173085.1;Parent=gene-O5C65_003003;Dbxref=NCBI_GP:HJH9173085.1;Name=HJH9173085.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459515.1;locus_tag=O5C65_003003;product=MFS transporter;protein_id=HJH9173085.1;transl_table=11 DALFDA020000019.1 tpg gene 79576 81030 . + . ID=gene-O5C65_003004;Name=O5C65_003004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003004 DALFDA020000019.1 Protein Homology CDS 79576 81030 . + 0 ID=cds-HJH9173086.1;Parent=gene-O5C65_003004;Dbxref=NCBI_GP:HJH9173086.1;Name=HJH9173086.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=O5C65_003004;product=allantoin transporter;protein_id=HJH9173086.1;transl_table=11 DALFDA020000019.1 tpg gene 81109 82470 . + . ID=gene-O5C65_003005;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=O5C65_003005 DALFDA020000019.1 Protein Homology CDS 81109 82470 . + 0 ID=cds-HJH9173087.1;Parent=gene-O5C65_003005;Dbxref=NCBI_GP:HJH9173087.1;Name=HJH9173087.1;Ontology_term=GO:0000256,GO:0004038;gbkey=CDS;gene=allB;go_function=allantoinase activity|0004038||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459518.1;locus_tag=O5C65_003005;product=allantoinase AllB;protein_id=HJH9173087.1;transl_table=11 DALFDA020000019.1 tpg gene 82529 83827 . + . ID=gene-O5C65_003006;Name=O5C65_003006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003006 DALFDA020000019.1 Protein Homology CDS 82529 83827 . + 0 ID=cds-HJH9173088.1;Parent=gene-O5C65_003006;Dbxref=NCBI_GP:HJH9173088.1;Name=HJH9173088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459519.1;locus_tag=O5C65_003006;product=uracil/xanthine transporter;protein_id=HJH9173088.1;transl_table=11 DALFDA020000019.1 tpg gene 83850 84998 . + . ID=gene-O5C65_003007;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=O5C65_003007 DALFDA020000019.1 Protein Homology CDS 83850 84998 . + 0 ID=cds-HJH9173089.1;Parent=gene-O5C65_003007;Dbxref=NCBI_GP:HJH9173089.1;Name=HJH9173089.1;gbkey=CDS;gene=glxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459520.1;locus_tag=O5C65_003007;product=glycerate 3-kinase;protein_id=HJH9173089.1;transl_table=11 DALFDA020000019.1 tpg gene 85078 85863 . - . ID=gene-O5C65_003008;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=O5C65_003008 DALFDA020000019.1 Protein Homology CDS 85078 85863 . - 0 ID=cds-HJH9173090.1;Parent=gene-O5C65_003008;Dbxref=NCBI_GP:HJH9173090.1;Name=HJH9173090.1;Ontology_term=GO:0010136,GO:0071522;gbkey=CDS;gene=allE;go_function=ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459521.1;locus_tag=O5C65_003008;product=(S)-ureidoglycine aminohydrolase;protein_id=HJH9173090.1;transl_table=11 DALFDA020000019.1 tpg gene 85874 87109 . - . ID=gene-O5C65_003009;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=O5C65_003009 DALFDA020000019.1 Protein Homology CDS 85874 87109 . - 0 ID=cds-HJH9173091.1;Parent=gene-O5C65_003009;Dbxref=NCBI_GP:HJH9173091.1;Name=HJH9173091.1;Ontology_term=GO:0000256,GO:0009442,GO:0047652;gbkey=CDS;gene=allC;go_function=allantoate deiminase activity|0047652||IEA;go_process=allantoin catabolic process|0000256||IEA,allantoin assimilation pathway|0009442||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459522.1;locus_tag=O5C65_003009;product=allantoate deiminase;protein_id=HJH9173091.1;transl_table=11 DALFDA020000019.1 tpg gene 87131 88180 . - . ID=gene-O5C65_003010;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;locus_tag=O5C65_003010 DALFDA020000019.1 Protein Homology CDS 87131 88180 . - 0 ID=cds-HJH9173092.1;Parent=gene-O5C65_003010;Dbxref=NCBI_GP:HJH9173092.1;Name=HJH9173092.1;gbkey=CDS;gene=allD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459523.1;locus_tag=O5C65_003010;product=ureidoglycolate dehydrogenase AllD;protein_id=HJH9173092.1;transl_table=11 DALFDA020000019.1 tpg gene 88496 90160 . + . ID=gene-O5C65_003011;Name=O5C65_003011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003011 DALFDA020000019.1 Protein Homology CDS 88496 90160 . + 0 ID=cds-HJH9173093.1;Parent=gene-O5C65_003011;Dbxref=NCBI_GP:HJH9173093.1;Name=HJH9173093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459524.1;locus_tag=O5C65_003011;product=acyl-CoA synthetase FdrA;protein_id=HJH9173093.1;transl_table=11 DALFDA020000019.1 tpg gene 90170 91429 . + . ID=gene-O5C65_003012;Name=O5C65_003012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003012 DALFDA020000019.1 Protein Homology CDS 90170 91429 . + 0 ID=cds-HJH9173094.1;Parent=gene-O5C65_003012;Dbxref=NCBI_GP:HJH9173094.1;Name=HJH9173094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459525.1;locus_tag=O5C65_003012;product=DUF1116 domain-containing protein;protein_id=HJH9173094.1;transl_table=11 DALFDA020000019.1 tpg gene 91441 92250 . + . ID=gene-O5C65_003013;Name=O5C65_003013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003013 DALFDA020000019.1 Protein Homology CDS 91441 92250 . + 0 ID=cds-HJH9173095.1;Parent=gene-O5C65_003013;Dbxref=NCBI_GP:HJH9173095.1;Name=HJH9173095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459526.1;locus_tag=O5C65_003013;product=DUF2877 domain-containing protein;protein_id=HJH9173095.1;transl_table=11 DALFDA020000019.1 tpg gene 92254 93147 . + . ID=gene-O5C65_003014;Name=O5C65_003014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003014 DALFDA020000019.1 Protein Homology CDS 92254 93147 . + 0 ID=cds-HJH9173096.1;Parent=gene-O5C65_003014;Dbxref=NCBI_GP:HJH9173096.1;Name=HJH9173096.1;Ontology_term=GO:0006525,GO:0008804;gbkey=CDS;go_function=carbamate kinase activity|0008804||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459527.1;locus_tag=O5C65_003014;product=carbamate kinase;protein_id=HJH9173096.1;transl_table=11 DALFDA020000019.1 tpg gene 93188 94255 . - . ID=gene-O5C65_003015;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=O5C65_003015 DALFDA020000019.1 Protein Homology CDS 93188 94255 . - 0 ID=cds-HJH9173097.1;Parent=gene-O5C65_003015;Dbxref=NCBI_GP:HJH9173097.1;Name=HJH9173097.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459528.1;locus_tag=O5C65_003015;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=HJH9173097.1;transl_table=11 DALFDA020000019.1 tpg gene 94252 94761 . - . ID=gene-O5C65_003016;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=O5C65_003016 DALFDA020000019.1 Protein Homology CDS 94252 94761 . - 0 ID=cds-HJH9173098.1;Parent=gene-O5C65_003016;Dbxref=NCBI_GP:HJH9173098.1;Name=HJH9173098.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459529.1;locus_tag=O5C65_003016;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=HJH9173098.1;transl_table=11 DALFDA020000019.1 tpg gene 94879 95601 . - . ID=gene-O5C65_003017;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=O5C65_003017 DALFDA020000019.1 Protein Homology CDS 94879 95601 . - 0 ID=cds-HJH9173099.1;Parent=gene-O5C65_003017;Dbxref=NCBI_GP:HJH9173099.1;Name=HJH9173099.1;Ontology_term=GO:0009245,GO:0008758,GO:0016462,GO:0005737;gbkey=CDS;gene=lpxH;go_component=cytoplasm|0005737||IEA;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459530.1;locus_tag=O5C65_003017;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=HJH9173099.1;transl_table=11 DALFDA020000019.1 tpg gene 95604 96098 . - . ID=gene-O5C65_003018;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=O5C65_003018 DALFDA020000019.1 Protein Homology CDS 95604 96098 . - 0 ID=cds-HJH9173100.1;Parent=gene-O5C65_003018;Dbxref=NCBI_GP:HJH9173100.1;Name=HJH9173100.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=O5C65_003018;product=peptidylprolyl isomerase B;protein_id=HJH9173100.1;transl_table=11 DALFDA020000019.1 tpg gene 96271 97656 . + . ID=gene-O5C65_003019;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=O5C65_003019 DALFDA020000019.1 Protein Homology CDS 96271 97656 . + 0 ID=cds-HJH9173101.1;Parent=gene-O5C65_003019;Dbxref=NCBI_GP:HJH9173101.1;Name=HJH9173101.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=O5C65_003019;product=cysteine--tRNA ligase;protein_id=HJH9173101.1;transl_table=11 DALFDA020000019.1 tpg gene 97747 98295 . - . ID=gene-O5C65_003020;Name=O5C65_003020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003020 DALFDA020000019.1 Protein Homology CDS 97747 98295 . - 0 ID=cds-HJH9173102.1;Parent=gene-O5C65_003020;Dbxref=NCBI_GP:HJH9173102.1;Name=HJH9173102.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728132.1;locus_tag=O5C65_003020;product=metal-dependent hydrolase;protein_id=HJH9173102.1;transl_table=11 DALFDA020000019.1 tpg gene 98422 98634 . - . ID=gene-O5C65_003021;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=O5C65_003021 DALFDA020000019.1 Protein Homology CDS 98422 98634 . - 0 ID=cds-HJH9173103.1;Parent=gene-O5C65_003021;Dbxref=NCBI_GP:HJH9173103.1;Name=HJH9173103.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459536.1;locus_tag=O5C65_003021;product=ribosome-associated protein YbcJ;protein_id=HJH9173103.1;transl_table=11 DALFDA020000019.1 tpg gene 98636 99502 . - . ID=gene-O5C65_003022;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=O5C65_003022 DALFDA020000019.1 Protein Homology CDS 98636 99502 . - 0 ID=cds-HJH9173104.1;Parent=gene-O5C65_003022;Dbxref=NCBI_GP:HJH9173104.1;Name=HJH9173104.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459537.1;locus_tag=O5C65_003022;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=HJH9173104.1;transl_table=11 DALFDA020000019.1 tpg gene 100049 100606 . + . ID=gene-O5C65_003023;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=O5C65_003023 DALFDA020000019.1 Protein Homology CDS 100049 100606 . + 0 ID=cds-HJH9173105.1;Parent=gene-O5C65_003023;Dbxref=NCBI_GP:HJH9173105.1;Name=HJH9173105.1;gbkey=CDS;gene=fimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459538.3;locus_tag=O5C65_003023;product=type 1 fimbrial protein subunit FimA;protein_id=HJH9173105.1;transl_table=11 DALFDA020000019.1 tpg gene 100681 101214 . + . ID=gene-O5C65_003024;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=O5C65_003024 DALFDA020000019.1 Protein Homology CDS 100681 101214 . + 0 ID=cds-HJH9173106.1;Parent=gene-O5C65_003024;Dbxref=NCBI_GP:HJH9173106.1;Name=HJH9173106.1;gbkey=CDS;gene=fimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459539.1;locus_tag=O5C65_003024;product=type 1 fimbrial protein subunit FimI;protein_id=HJH9173106.1;transl_table=11 DALFDA020000019.1 tpg gene 101258 101950 . + . ID=gene-O5C65_003025;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=O5C65_003025 DALFDA020000019.1 Protein Homology CDS 101258 101950 . + 0 ID=cds-HJH9173107.1;Parent=gene-O5C65_003025;Dbxref=NCBI_GP:HJH9173107.1;Name=HJH9173107.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459540.1;locus_tag=O5C65_003025;product=type 1 fimbria chaperone FimC;protein_id=HJH9173107.1;transl_table=11 DALFDA020000019.1 tpg gene 101981 104593 . + . ID=gene-O5C65_003026;Name=O5C65_003026;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003026 DALFDA020000019.1 Protein Homology CDS 101981 104593 . + 0 ID=cds-HJH9173108.1;Parent=gene-O5C65_003026;Dbxref=NCBI_GP:HJH9173108.1;Name=HJH9173108.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459541.1;locus_tag=O5C65_003026;product=fimbrial biogenesis usher protein;protein_id=HJH9173108.1;transl_table=11 DALFDA020000019.1 tpg gene 104608 105615 . + . ID=gene-O5C65_003027;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=O5C65_003027 DALFDA020000019.1 Protein Homology CDS 104608 105615 . + 0 ID=cds-HJH9173109.1;Parent=gene-O5C65_003027;Dbxref=NCBI_GP:HJH9173109.1;Name=HJH9173109.1;Ontology_term=GO:0007155;gbkey=CDS;gene=fimH;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459542.1;locus_tag=O5C65_003027;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=HJH9173109.1;transl_table=11 DALFDA020000019.1 tpg gene 105625 106143 . + . ID=gene-O5C65_003028;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=O5C65_003028 DALFDA020000019.1 Protein Homology CDS 105625 106143 . + 0 ID=cds-HJH9173110.1;Parent=gene-O5C65_003028;Dbxref=NCBI_GP:HJH9173110.1;Name=HJH9173110.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459543.1;locus_tag=O5C65_003028;product=fimbria assembly protein;protein_id=HJH9173110.1;transl_table=11 DALFDA020000019.1 tpg gene 106189 106821 . - . ID=gene-O5C65_003029;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=O5C65_003029 DALFDA020000019.1 Protein Homology CDS 106189 106821 . - 0 ID=cds-HJH9173111.1;Parent=gene-O5C65_003029;Dbxref=NCBI_GP:HJH9173111.1;Name=HJH9173111.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459544.1;locus_tag=O5C65_003029;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=HJH9173111.1;transl_table=11 DALFDA020000019.1 tpg gene 107425 108147 . - . ID=gene-O5C65_003030;Name=fimY;gbkey=Gene;gene=fimY;gene_biotype=protein_coding;locus_tag=O5C65_003030 DALFDA020000019.1 Protein Homology CDS 107425 108147 . - 0 ID=cds-HJH9173112.1;Parent=gene-O5C65_003030;Dbxref=NCBI_GP:HJH9173112.1;Name=HJH9173112.1;gbkey=CDS;gene=fimY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459545.1;locus_tag=O5C65_003030;product=fimbria biosynthesis regulator FimY;protein_id=HJH9173112.1;transl_table=11 DALFDA020000019.1 tpg gene 108166 108477 . - . ID=gene-O5C65_003031;Name=O5C65_003031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003031 DALFDA020000019.1 Protein Homology CDS 108166 108477 . - 0 ID=cds-HJH9173113.1;Parent=gene-O5C65_003031;Dbxref=NCBI_GP:HJH9173113.1;Name=HJH9173113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459546.1;locus_tag=O5C65_003031;product=diguanylate cyclase;protein_id=HJH9173113.1;transl_table=11 DALFDA020000019.1 tpg gene 108639 109235 . - . ID=gene-O5C65_003032;Name=fimW;gbkey=Gene;gene=fimW;gene_biotype=protein_coding;locus_tag=O5C65_003032 DALFDA020000019.1 Protein Homology CDS 108639 109235 . - 0 ID=cds-HJH9173114.1;Parent=gene-O5C65_003032;Dbxref=NCBI_GP:HJH9173114.1;Name=HJH9173114.1;gbkey=CDS;gene=fimW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459547.1;locus_tag=O5C65_003032;product=fimbria biosynthesis transcriptional regulator FimW;protein_id=HJH9173114.1;transl_table=11 DALFDA020000019.1 tpg gene 109490 109566 . + . ID=gene-O5C65_003033;Name=O5C65_003033;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_003033 DALFDA020000019.1 tRNAscan-SE tRNA 109490 109566 . + . ID=rna-O5C65_003033;Parent=gene-O5C65_003033;anticodon=(pos:109524..109526);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003033;product=tRNA-Arg DALFDA020000019.1 tRNAscan-SE exon 109490 109566 . + . ID=exon-O5C65_003033-1;Parent=rna-O5C65_003033;anticodon=(pos:109524..109526);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003033;product=tRNA-Arg DALFDA020000019.1 tpg gene 109582 110745 . - . ID=gene-O5C65_003034;Name=O5C65_003034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003034 DALFDA020000019.1 Protein Homology CDS 109582 110745 . - 0 ID=cds-HJH9173115.1;Parent=gene-O5C65_003034;Dbxref=NCBI_GP:HJH9173115.1;Name=HJH9173115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415069.1;locus_tag=O5C65_003034;product=integrase;protein_id=HJH9173115.1;transl_table=11 DALFDA020000019.1 tpg pseudogene 110877 110972 . - . ID=gene-O5C65_003035;Name=O5C65_003035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_003035;pseudo=true DALFDA020000019.1 Protein Homology CDS 110877 110972 . - 0 ID=cds-O5C65_003035;Parent=gene-O5C65_003035;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024139.6;locus_tag=O5C65_003035;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 DALFDA020000019.1 tpg gene 110975 111325 . - . ID=gene-O5C65_003036;Name=O5C65_003036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003036 DALFDA020000019.1 Protein Homology CDS 110975 111325 . - 0 ID=cds-HJH9173116.1;Parent=gene-O5C65_003036;Dbxref=NCBI_GP:HJH9173116.1;Name=HJH9173116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016048814.1;locus_tag=O5C65_003036;product=hypothetical protein;protein_id=HJH9173116.1;transl_table=11 DALFDA020000019.1 tpg gene 111397 111681 . - . ID=gene-O5C65_003037;Name=O5C65_003037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003037 DALFDA020000019.1 Protein Homology CDS 111397 111681 . - 0 ID=cds-HJH9173117.1;Parent=gene-O5C65_003037;Dbxref=NCBI_GP:HJH9173117.1;Name=HJH9173117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016248938.1;locus_tag=O5C65_003037;product=ASCH domain-containing protein;protein_id=HJH9173117.1;transl_table=11 DALFDA020000019.1 tpg gene 111674 112210 . - . ID=gene-O5C65_003038;Name=O5C65_003038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003038 DALFDA020000019.1 Protein Homology CDS 111674 112210 . - 0 ID=cds-HJH9173118.1;Parent=gene-O5C65_003038;Dbxref=NCBI_GP:HJH9173118.1;Name=HJH9173118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001084858.1;locus_tag=O5C65_003038;product=DUF551 domain-containing protein;protein_id=HJH9173118.1;transl_table=11 ##sequence-region DALFDA020000020.1 1 107339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000020.1 tpg region 1 107339 . + . ID=DALFDA020000020.1:1..107339;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000020.1 tpg gene 1 186 . - . ID=gene-O5C65_003039;Name=O5C65_003039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003039;partial=true;start_range=.,1 DALFDA020000020.1 Protein Homology CDS 1 186 . - 0 ID=cds-HJH9173119.1;Parent=gene-O5C65_003039;Dbxref=NCBI_GP:HJH9173119.1;Name=HJH9173119.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006777639.1;locus_tag=O5C65_003039;partial=true;product=CaiF/GrlA family transcriptional regulator;protein_id=HJH9173119.1;start_range=.,1;transl_table=11 DALFDA020000020.1 tpg gene 296 1363 . - . ID=gene-O5C65_003040;Name=O5C65_003040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003040 DALFDA020000020.1 Protein Homology CDS 296 1363 . - 0 ID=cds-HJH9173120.1;Parent=gene-O5C65_003040;Dbxref=NCBI_GP:HJH9173120.1;Name=HJH9173120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147761.1;locus_tag=O5C65_003040;product=fimbrial protein;protein_id=HJH9173120.1;transl_table=11 DALFDA020000020.1 tpg gene 1360 2103 . - . ID=gene-O5C65_003041;Name=stdC;gbkey=Gene;gene=stdC;gene_biotype=protein_coding;locus_tag=O5C65_003041 DALFDA020000020.1 Protein Homology CDS 1360 2103 . - 0 ID=cds-HJH9173121.1;Parent=gene-O5C65_003041;Dbxref=NCBI_GP:HJH9173121.1;Name=HJH9173121.1;gbkey=CDS;gene=stdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461944.1;locus_tag=O5C65_003041;product=fimbrial biogenesis chaperone StdC;protein_id=HJH9173121.1;transl_table=11 DALFDA020000020.1 tpg gene 2144 4633 . - . ID=gene-O5C65_003042;Name=stdB;gbkey=Gene;gene=stdB;gene_biotype=protein_coding;locus_tag=O5C65_003042 DALFDA020000020.1 Protein Homology CDS 2144 4633 . - 0 ID=cds-HJH9173122.1;Parent=gene-O5C65_003042;Dbxref=NCBI_GP:HJH9173122.1;Name=HJH9173122.1;gbkey=CDS;gene=stdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461945.1;locus_tag=O5C65_003042;product=fimbrial outer membrane usher protein StdB;protein_id=HJH9173122.1;transl_table=11 DALFDA020000020.1 tpg gene 4753 5334 . - . ID=gene-O5C65_003043;Name=O5C65_003043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003043 DALFDA020000020.1 Protein Homology CDS 4753 5334 . - 0 ID=cds-HJH9173123.1;Parent=gene-O5C65_003043;Dbxref=NCBI_GP:HJH9173123.1;Name=HJH9173123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406296.1;locus_tag=O5C65_003043;product=fimbrial protein;protein_id=HJH9173123.1;transl_table=11 DALFDA020000020.1 tpg gene 6053 6685 . - . ID=gene-O5C65_003044;Name=O5C65_003044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003044 DALFDA020000020.1 Protein Homology CDS 6053 6685 . - 0 ID=cds-HJH9173124.1;Parent=gene-O5C65_003044;Dbxref=NCBI_GP:HJH9173124.1;Name=HJH9173124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461947.1;locus_tag=O5C65_003044;product=YfdX family protein;protein_id=HJH9173124.1;transl_table=11 DALFDA020000020.1 tpg gene 6732 7268 . - . ID=gene-O5C65_003045;Name=O5C65_003045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003045 DALFDA020000020.1 Protein Homology CDS 6732 7268 . - 0 ID=cds-HJH9173125.1;Parent=gene-O5C65_003045;Dbxref=NCBI_GP:HJH9173125.1;Name=HJH9173125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461948.1;locus_tag=O5C65_003045;product=STM3031 family outer membrane protein;protein_id=HJH9173125.1;transl_table=11 DALFDA020000020.1 tpg gene 7696 7947 . + . ID=gene-O5C65_003046;Name=O5C65_003046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003046 DALFDA020000020.1 Protein Homology CDS 7696 7947 . + 0 ID=cds-HJH9173126.1;Parent=gene-O5C65_003046;Dbxref=NCBI_GP:HJH9173126.1;Name=HJH9173126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449411.1;locus_tag=O5C65_003046;product=hypothetical protein;protein_id=HJH9173126.1;transl_table=11 DALFDA020000020.1 tpg gene 8222 9028 . + . ID=gene-O5C65_003047;Name=O5C65_003047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003047 DALFDA020000020.1 Protein Homology CDS 8222 9028 . + 0 ID=cds-HJH9173127.1;Parent=gene-O5C65_003047;Dbxref=NCBI_GP:HJH9173127.1;Name=HJH9173127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461953.1;locus_tag=O5C65_003047;product=DUF1460 domain-containing protein;protein_id=HJH9173127.1;transl_table=11 DALFDA020000020.1 tpg gene 9160 9233 . - . ID=gene-O5C65_003048;Name=O5C65_003048;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_003048 DALFDA020000020.1 tRNAscan-SE tRNA 9160 9233 . - . ID=rna-O5C65_003048;Parent=gene-O5C65_003048;anticodon=(pos:complement(9199..9201));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003048;product=tRNA-Gly DALFDA020000020.1 tRNAscan-SE exon 9160 9233 . - . ID=exon-O5C65_003048-1;Parent=rna-O5C65_003048;anticodon=(pos:complement(9199..9201));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003048;product=tRNA-Gly DALFDA020000020.1 tpg gene 9313 10071 . - . ID=gene-O5C65_003049;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=O5C65_003049 DALFDA020000020.1 Protein Homology CDS 9313 10071 . - 0 ID=cds-HJH9173128.1;Parent=gene-O5C65_003049;Dbxref=NCBI_GP:HJH9173128.1;Name=HJH9173128.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461954.1;locus_tag=O5C65_003049;product=amidase activator ActS;protein_id=HJH9173128.1;transl_table=11 DALFDA020000020.1 tpg gene 10336 10881 . + . ID=gene-O5C65_003050;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=O5C65_003050 DALFDA020000020.1 Protein Homology CDS 10336 10881 . + 0 ID=cds-HJH9173129.1;Parent=gene-O5C65_003050;Dbxref=NCBI_GP:HJH9173129.1;Name=HJH9173129.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461955.1;locus_tag=O5C65_003050;product=isopentenyl-diphosphate Delta-isomerase;protein_id=HJH9173129.1;transl_table=11 DALFDA020000020.1 tpg gene 10957 12474 . - . ID=gene-O5C65_003051;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=O5C65_003051 DALFDA020000020.1 Protein Homology CDS 10957 12474 . - 0 ID=cds-HJH9173130.1;Parent=gene-O5C65_003051;Dbxref=NCBI_GP:HJH9173130.1;Name=HJH9173130.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=O5C65_003051;product=lysine--tRNA ligase;protein_id=HJH9173130.1;transl_table=11 DALFDA020000020.1 tpg gene 12484 13582 . - . ID=gene-O5C65_003052;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=O5C65_003052 DALFDA020000020.1 Protein Homology CDS 13508 13582 . - 0 ID=cds-HJH9173131.1;Parent=gene-O5C65_003052;Dbxref=NCBI_GP:HJH9173131.1;Name=HJH9173131.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=O5C65_003052;product=peptide chain release factor 2;protein_id=HJH9173131.1;transl_table=11 DALFDA020000020.1 Protein Homology CDS 12484 13506 . - 0 ID=cds-HJH9173131.1;Parent=gene-O5C65_003052;Dbxref=NCBI_GP:HJH9173131.1;Name=HJH9173131.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=O5C65_003052;product=peptide chain release factor 2;protein_id=HJH9173131.1;transl_table=11 DALFDA020000020.1 tpg gene 13687 15420 . - . ID=gene-O5C65_003053;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=O5C65_003053 DALFDA020000020.1 Protein Homology CDS 13687 15420 . - 0 ID=cds-HJH9173132.1;Parent=gene-O5C65_003053;Dbxref=NCBI_GP:HJH9173132.1;Name=HJH9173132.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461958.1;locus_tag=O5C65_003053;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=HJH9173132.1;transl_table=11 DALFDA020000020.1 tpg gene 15426 16139 . - . ID=gene-O5C65_003054;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=O5C65_003054 DALFDA020000020.1 Protein Homology CDS 15426 16139 . - 0 ID=cds-HJH9173133.1;Parent=gene-O5C65_003054;Dbxref=NCBI_GP:HJH9173133.1;Name=HJH9173133.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461959.1;locus_tag=O5C65_003054;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=HJH9173133.1;transl_table=11 DALFDA020000020.1 tpg gene 16163 17059 . - . ID=gene-O5C65_003055;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=O5C65_003055 DALFDA020000020.1 Protein Homology CDS 16163 17059 . - 0 ID=cds-HJH9173134.1;Parent=gene-O5C65_003055;Dbxref=NCBI_GP:HJH9173134.1;Name=HJH9173134.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461960.1;locus_tag=O5C65_003055;product=site-specific tyrosine recombinase XerD;protein_id=HJH9173134.1;transl_table=11 DALFDA020000020.1 tpg gene 17172 17693 . + . ID=gene-O5C65_003056;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=O5C65_003056 DALFDA020000020.1 Protein Homology CDS 17172 17693 . + 0 ID=cds-HJH9173135.1;Parent=gene-O5C65_003056;Dbxref=NCBI_GP:HJH9173135.1;Name=HJH9173135.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461961.1;locus_tag=O5C65_003056;product=flavodoxin FldB;protein_id=HJH9173135.1;transl_table=11 DALFDA020000020.1 tpg gene 17746 18159 . - . ID=gene-O5C65_003057;Name=O5C65_003057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003057 DALFDA020000020.1 Protein Homology CDS 17746 18159 . - 0 ID=cds-HJH9173136.1;Parent=gene-O5C65_003057;Dbxref=NCBI_GP:HJH9173136.1;Name=HJH9173136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461962.1;locus_tag=O5C65_003057;product=protein YgfX;protein_id=HJH9173136.1;transl_table=11 DALFDA020000020.1 tpg gene 18140 18406 . - . ID=gene-O5C65_003058;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=O5C65_003058 DALFDA020000020.1 Protein Homology CDS 18140 18406 . - 0 ID=cds-HJH9173137.1;Parent=gene-O5C65_003058;Dbxref=NCBI_GP:HJH9173137.1;Name=HJH9173137.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=O5C65_003058;product=FAD assembly factor SdhE;protein_id=HJH9173137.1;transl_table=11 DALFDA020000020.1 tpg gene 18656 19636 . + . ID=gene-O5C65_003059;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=O5C65_003059 DALFDA020000020.1 Protein Homology CDS 18656 19636 . + 0 ID=cds-HJH9173138.1;Parent=gene-O5C65_003059;Dbxref=NCBI_GP:HJH9173138.1;Name=HJH9173138.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461964.1;locus_tag=O5C65_003059;product=tRNA-modifying protein YgfZ;protein_id=HJH9173138.1;transl_table=11 DALFDA020000020.1 tpg gene 19752 20411 . - . ID=gene-O5C65_003060;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=O5C65_003060 DALFDA020000020.1 Protein Homology CDS 19752 20411 . - 0 ID=cds-HJH9173139.1;Parent=gene-O5C65_003060;Dbxref=NCBI_GP:HJH9173139.1;Name=HJH9173139.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461965.1;locus_tag=O5C65_003060;product=PAQR family membrane homeostasis protein TrhA;protein_id=HJH9173139.1;transl_table=11 DALFDA020000020.1 tpg gene 20575 20886 . - . ID=gene-O5C65_003061;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=O5C65_003061 DALFDA020000020.1 Protein Homology CDS 20575 20886 . - 0 ID=cds-HJH9173140.1;Parent=gene-O5C65_003061;Dbxref=NCBI_GP:HJH9173140.1;Name=HJH9173140.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461966.1;locus_tag=O5C65_003061;product=N(4)-acetylcytidine aminohydrolase;protein_id=HJH9173140.1;transl_table=11 DALFDA020000020.1 tpg gene 21036 22469 . + . ID=gene-O5C65_003062;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=O5C65_003062 DALFDA020000020.1 Protein Homology CDS 21036 22469 . + 0 ID=cds-HJH9173141.1;Parent=gene-O5C65_003062;Dbxref=NCBI_GP:HJH9173141.1;Name=HJH9173141.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461967.1;locus_tag=O5C65_003062;product=6-phospho-beta-glucosidase BglA;protein_id=HJH9173141.1;transl_table=11 DALFDA020000020.1 tpg gene 22517 23410 . - . ID=gene-O5C65_003063;Name=O5C65_003063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003063 DALFDA020000020.1 Protein Homology CDS 22517 23410 . - 0 ID=cds-HJH9173142.1;Parent=gene-O5C65_003063;Dbxref=NCBI_GP:HJH9173142.1;Name=HJH9173142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461968.1;locus_tag=O5C65_003063;product=transporter;protein_id=HJH9173142.1;transl_table=11 DALFDA020000020.1 tpg gene 23866 26739 . - . ID=gene-O5C65_003064;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=O5C65_003064 DALFDA020000020.1 Protein Homology CDS 23866 26739 . - 0 ID=cds-HJH9173143.1;Parent=gene-O5C65_003064;Dbxref=NCBI_GP:HJH9173143.1;Name=HJH9173143.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461969.1;locus_tag=O5C65_003064;product=aminomethyl-transferring glycine dehydrogenase;protein_id=HJH9173143.1;transl_table=11 DALFDA020000020.1 tpg gene 26902 27291 . - . ID=gene-O5C65_003065;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=O5C65_003065 DALFDA020000020.1 Protein Homology CDS 26902 27291 . - 0 ID=cds-HJH9173144.1;Parent=gene-O5C65_003065;Dbxref=NCBI_GP:HJH9173144.1;Name=HJH9173144.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=O5C65_003065;product=glycine cleavage system protein GcvH;protein_id=HJH9173144.1;transl_table=11 DALFDA020000020.1 tpg gene 27317 28411 . - . ID=gene-O5C65_003066;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=O5C65_003066 DALFDA020000020.1 Protein Homology CDS 27317 28411 . - 0 ID=cds-HJH9173145.1;Parent=gene-O5C65_003066;Dbxref=NCBI_GP:HJH9173145.1;Name=HJH9173145.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461971.1;locus_tag=O5C65_003066;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=HJH9173145.1;transl_table=11 DALFDA020000020.1 tpg gene 28866 30068 . - . ID=gene-O5C65_003067;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=O5C65_003067 DALFDA020000020.1 Protein Homology CDS 28866 30068 . - 0 ID=cds-HJH9173146.1;Parent=gene-O5C65_003067;Dbxref=NCBI_GP:HJH9173146.1;Name=HJH9173146.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461972.1;locus_tag=O5C65_003067;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=HJH9173146.1;transl_table=11 DALFDA020000020.1 tpg gene 30194 31372 . - . ID=gene-O5C65_003068;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=O5C65_003068 DALFDA020000020.1 Protein Homology CDS 30194 31372 . - 0 ID=cds-HJH9173147.1;Parent=gene-O5C65_003068;Dbxref=NCBI_GP:HJH9173147.1;Name=HJH9173147.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461973.2;locus_tag=O5C65_003068;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=HJH9173147.1;transl_table=11 DALFDA020000020.1 tpg gene 31369 32685 . - . ID=gene-O5C65_003069;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=O5C65_003069 DALFDA020000020.1 Protein Homology CDS 31369 32685 . - 0 ID=cds-HJH9173148.1;Parent=gene-O5C65_003069;Dbxref=NCBI_GP:HJH9173148.1;Name=HJH9173148.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461974.1;locus_tag=O5C65_003069;product=Xaa-Pro aminopeptidase;protein_id=HJH9173148.1;transl_table=11 DALFDA020000020.1 tpg gene 32711 33289 . - . ID=gene-O5C65_003070;Name=O5C65_003070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003070 DALFDA020000020.1 Protein Homology CDS 32711 33289 . - 0 ID=cds-HJH9173149.1;Parent=gene-O5C65_003070;Dbxref=NCBI_GP:HJH9173149.1;Name=HJH9173149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=O5C65_003070;product=YecA family protein;protein_id=HJH9173149.1;transl_table=11 DALFDA020000020.1 tpg gene 33456 33785 . + . ID=gene-O5C65_003071;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=O5C65_003071 DALFDA020000020.1 Protein Homology CDS 33456 33785 . + 0 ID=cds-HJH9173150.1;Parent=gene-O5C65_003071;Dbxref=NCBI_GP:HJH9173150.1;Name=HJH9173150.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461976.1;locus_tag=O5C65_003071;product=cell division protein ZapA;protein_id=HJH9173150.1;transl_table=11 DALFDA020000020.1 tpg gene 33827 34010 . + . ID=gene-O5C65_003072;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=O5C65_003072 DALFDA020000020.1 cmsearch ncRNA 33827 34010 . + . ID=rna-O5C65_003072;Parent=gene-O5C65_003072;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_003072;product=6S RNA DALFDA020000020.1 cmsearch exon 33827 34010 . + . ID=exon-O5C65_003072-1;Parent=rna-O5C65_003072;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_003072;product=6S RNA DALFDA020000020.1 tpg gene 34031 34627 . + . ID=gene-O5C65_003073;Name=O5C65_003073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003073 DALFDA020000020.1 Protein Homology CDS 34031 34627 . + 0 ID=cds-HJH9173151.1;Parent=gene-O5C65_003073;Dbxref=NCBI_GP:HJH9173151.1;Name=HJH9173151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=O5C65_003073;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=HJH9173151.1;transl_table=11 DALFDA020000020.1 tpg gene 35009 36241 . - . ID=gene-O5C65_003074;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=O5C65_003074 DALFDA020000020.1 Protein Homology CDS 35009 36241 . - 0 ID=cds-HJH9173152.1;Parent=gene-O5C65_003074;Dbxref=NCBI_GP:HJH9173152.1;Name=HJH9173152.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461978.1;locus_tag=O5C65_003074;product=phosphoglycerate dehydrogenase;protein_id=HJH9173152.1;transl_table=11 DALFDA020000020.1 tpg gene 36508 37167 . - . ID=gene-O5C65_003075;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=O5C65_003075 DALFDA020000020.1 Protein Homology CDS 36508 37167 . - 0 ID=cds-HJH9173153.1;Parent=gene-O5C65_003075;Dbxref=NCBI_GP:HJH9173153.1;Name=HJH9173153.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461979.1;locus_tag=O5C65_003075;product=ribose-5-phosphate isomerase RpiA;protein_id=HJH9173153.1;transl_table=11 DALFDA020000020.1 tpg gene 37321 38214 . + . ID=gene-O5C65_003076;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=O5C65_003076 DALFDA020000020.1 Protein Homology CDS 37321 38214 . + 0 ID=cds-HJH9173154.1;Parent=gene-O5C65_003076;Dbxref=NCBI_GP:HJH9173154.1;Name=HJH9173154.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461980.1;locus_tag=O5C65_003076;product=DNA-binding transcriptional regulator ArgP;protein_id=HJH9173154.1;transl_table=11 DALFDA020000020.1 tpg gene 38480 39226 . - . ID=gene-O5C65_003077;Name=O5C65_003077;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003077 DALFDA020000020.1 Protein Homology CDS 38480 39226 . - 0 ID=cds-HJH9173155.1;Parent=gene-O5C65_003077;Dbxref=NCBI_GP:HJH9173155.1;Name=HJH9173155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461981.1;locus_tag=O5C65_003077;product=oxidative stress defense protein;protein_id=HJH9173155.1;transl_table=11 DALFDA020000020.1 tpg gene 39320 39955 . - . ID=gene-O5C65_003078;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=O5C65_003078 DALFDA020000020.1 Protein Homology CDS 39320 39955 . - 0 ID=cds-HJH9173156.1;Parent=gene-O5C65_003078;Dbxref=NCBI_GP:HJH9173156.1;Name=HJH9173156.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461982.1;locus_tag=O5C65_003078;product=arginine exporter ArgO;protein_id=HJH9173156.1;transl_table=11 DALFDA020000020.1 tpg gene 40156 41016 . - . ID=gene-O5C65_003079;Name=O5C65_003079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003079 DALFDA020000020.1 Protein Homology CDS 40156 41016 . - 0 ID=cds-HJH9173157.1;Parent=gene-O5C65_003079;Dbxref=NCBI_GP:HJH9173157.1;Name=HJH9173157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461983.1;locus_tag=O5C65_003079;product=small-conductance mechanosensitive channel MscS;protein_id=HJH9173157.1;transl_table=11 DALFDA020000020.1 tpg gene 41238 42317 . - . ID=gene-O5C65_003080;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=O5C65_003080 DALFDA020000020.1 Protein Homology CDS 41238 42317 . - 0 ID=cds-HJH9173158.1;Parent=gene-O5C65_003080;Dbxref=NCBI_GP:HJH9173158.1;Name=HJH9173158.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=O5C65_003080;product=class II fructose-bisphosphate aldolase;protein_id=HJH9173158.1;transl_table=11 DALFDA020000020.1 tpg gene 42419 43582 . - . ID=gene-O5C65_003081;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=O5C65_003081 DALFDA020000020.1 Protein Homology CDS 42419 43582 . - 0 ID=cds-HJH9173159.1;Parent=gene-O5C65_003081;Dbxref=NCBI_GP:HJH9173159.1;Name=HJH9173159.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=O5C65_003081;product=phosphoglycerate kinase;protein_id=HJH9173159.1;transl_table=11 DALFDA020000020.1 tpg gene 43604 44650 . - . ID=gene-O5C65_003082;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=O5C65_003082 DALFDA020000020.1 Protein Homology CDS 43604 44650 . - 0 ID=cds-HJH9173160.1;Parent=gene-O5C65_003082;Dbxref=NCBI_GP:HJH9173160.1;Name=HJH9173160.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461986.1;locus_tag=O5C65_003082;product=erythrose-4-phosphate dehydrogenase;protein_id=HJH9173160.1;transl_table=11 DALFDA020000020.1 tpg gene 45024 45449 . + . ID=gene-O5C65_003083;Name=O5C65_003083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003083 DALFDA020000020.1 Protein Homology CDS 45024 45449 . + 0 ID=cds-HJH9173161.1;Parent=gene-O5C65_003083;Dbxref=NCBI_GP:HJH9173161.1;Name=HJH9173161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461987.1;locus_tag=O5C65_003083;product=PPC domain-containing DNA-binding protein;protein_id=HJH9173161.1;transl_table=11 DALFDA020000020.1 tpg gene 45475 46053 . + . ID=gene-O5C65_003084;Name=O5C65_003084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003084 DALFDA020000020.1 Protein Homology CDS 45475 46053 . + 0 ID=cds-HJH9173162.1;Parent=gene-O5C65_003084;Dbxref=NCBI_GP:HJH9173162.1;Name=HJH9173162.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461988.1;locus_tag=O5C65_003084;product=ECF transporter S component;protein_id=HJH9173162.1;transl_table=11 DALFDA020000020.1 tpg gene 46054 46761 . + . ID=gene-O5C65_003085;Name=O5C65_003085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003085 DALFDA020000020.1 Protein Homology CDS 46054 46761 . + 0 ID=cds-HJH9173163.1;Parent=gene-O5C65_003085;Dbxref=NCBI_GP:HJH9173163.1;Name=HJH9173163.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461989.1;locus_tag=O5C65_003085;product=energy-coupling factor transporter transmembrane component T;protein_id=HJH9173163.1;transl_table=11 DALFDA020000020.1 tpg gene 46749 47426 . + . ID=gene-O5C65_003086;Name=O5C65_003086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003086 DALFDA020000020.1 Protein Homology CDS 46749 47426 . + 0 ID=cds-HJH9173164.1;Parent=gene-O5C65_003086;Dbxref=NCBI_GP:HJH9173164.1;Name=HJH9173164.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461990.1;locus_tag=O5C65_003086;product=ATP-binding cassette domain-containing protein;protein_id=HJH9173164.1;transl_table=11 DALFDA020000020.1 tpg gene 47420 48076 . + . ID=gene-O5C65_003087;Name=O5C65_003087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003087 DALFDA020000020.1 Protein Homology CDS 47420 48076 . + 0 ID=cds-HJH9173165.1;Parent=gene-O5C65_003087;Dbxref=NCBI_GP:HJH9173165.1;Name=HJH9173165.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461991.1;locus_tag=O5C65_003087;product=ABC transporter ATP-binding protein;protein_id=HJH9173165.1;transl_table=11 DALFDA020000020.1 tpg gene 48120 50111 . - . ID=gene-O5C65_003088;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=O5C65_003088 DALFDA020000020.1 Protein Homology CDS 48120 50111 . - 0 ID=cds-HJH9173166.1;Parent=gene-O5C65_003088;Dbxref=NCBI_GP:HJH9173166.1;Name=HJH9173166.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461992.1;locus_tag=O5C65_003088;product=transketolase;protein_id=HJH9173166.1;transl_table=11 DALFDA020000020.1 tpg gene 50387 51145 . + . ID=gene-O5C65_003089;Name=O5C65_003089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003089 DALFDA020000020.1 Protein Homology CDS 50387 51145 . + 0 ID=cds-HJH9173167.1;Parent=gene-O5C65_003089;Dbxref=NCBI_GP:HJH9173167.1;Name=HJH9173167.1;Ontology_term=GO:0004222,GO:0008237,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461993.1;locus_tag=O5C65_003089;product=M48 family metallopeptidase;protein_id=HJH9173167.1;transl_table=11 DALFDA020000020.1 tpg gene 51246 52166 . - . ID=gene-O5C65_003090;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=O5C65_003090 DALFDA020000020.1 Protein Homology CDS 51246 52166 . - 0 ID=cds-HJH9173168.1;Parent=gene-O5C65_003090;Dbxref=NCBI_GP:HJH9173168.1;Name=HJH9173168.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461994.1;locus_tag=O5C65_003090;product=agmatinase;protein_id=HJH9173168.1;transl_table=11 DALFDA020000020.1 tpg gene 52395 54371 . - . ID=gene-O5C65_003091;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=O5C65_003091 DALFDA020000020.1 Protein Homology CDS 52395 54371 . - 0 ID=cds-HJH9173169.1;Parent=gene-O5C65_003091;Dbxref=NCBI_GP:HJH9173169.1;Name=HJH9173169.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462002.1;locus_tag=O5C65_003091;product=biosynthetic arginine decarboxylase;protein_id=HJH9173169.1;transl_table=11 DALFDA020000020.1 tpg gene 54380 54511 . - . ID=gene-O5C65_003092;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=O5C65_003092 DALFDA020000020.1 Protein Homology CDS 54380 54511 . - 0 ID=cds-HJH9173170.1;Parent=gene-O5C65_003092;Dbxref=NCBI_GP:HJH9173170.1;Name=HJH9173170.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462003.1;locus_tag=O5C65_003092;product=acid stress response protein YqgB;protein_id=HJH9173170.1;transl_table=11 DALFDA020000020.1 tpg gene 54597 54746 . - . ID=gene-O5C65_003093;Name=O5C65_003093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003093 DALFDA020000020.1 Protein Homology CDS 54597 54746 . - 0 ID=cds-HJH9173171.1;Parent=gene-O5C65_003093;Dbxref=NCBI_GP:HJH9173171.1;Name=HJH9173171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=O5C65_003093;product=hypothetical protein;protein_id=HJH9173171.1;transl_table=11 DALFDA020000020.1 tpg gene 54806 55105 . - . ID=gene-O5C65_003094;Name=O5C65_003094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003094 DALFDA020000020.1 GeneMarkS-2+ CDS 54806 55105 . - 0 ID=cds-HJH9173172.1;Parent=gene-O5C65_003094;Dbxref=NCBI_GP:HJH9173172.1;Name=HJH9173172.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_003094;product=hypothetical protein;protein_id=HJH9173172.1;transl_table=11 DALFDA020000020.1 tpg gene 55161 56315 . + . ID=gene-O5C65_003095;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=O5C65_003095 DALFDA020000020.1 Protein Homology CDS 55161 56315 . + 0 ID=cds-HJH9173173.1;Parent=gene-O5C65_003095;Dbxref=NCBI_GP:HJH9173173.1;Name=HJH9173173.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=O5C65_003095;product=methionine adenosyltransferase;protein_id=HJH9173173.1;transl_table=11 DALFDA020000020.1 tpg gene 56808 58202 . + . ID=gene-O5C65_003096;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=O5C65_003096 DALFDA020000020.1 Protein Homology CDS 56808 58202 . + 0 ID=cds-HJH9173174.1;Parent=gene-O5C65_003096;Dbxref=NCBI_GP:HJH9173174.1;Name=HJH9173174.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462007.1;locus_tag=O5C65_003096;product=galactose/proton symporter;protein_id=HJH9173174.1;transl_table=11 DALFDA020000020.1 tpg gene 58281 58778 . + . ID=gene-O5C65_003097;Name=O5C65_003097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003097 DALFDA020000020.1 Protein Homology CDS 58281 58778 . + 0 ID=cds-HJH9173175.1;Parent=gene-O5C65_003097;Dbxref=NCBI_GP:HJH9173175.1;Name=HJH9173175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462008.1;locus_tag=O5C65_003097;product=SprT family zinc-dependent metalloprotease;protein_id=HJH9173175.1;transl_table=11 DALFDA020000020.1 tpg gene 58874 59581 . + . ID=gene-O5C65_003098;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=O5C65_003098 DALFDA020000020.1 Protein Homology CDS 58874 59581 . + 0 ID=cds-HJH9173176.1;Parent=gene-O5C65_003098;Dbxref=NCBI_GP:HJH9173176.1;Name=HJH9173176.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462009.1;locus_tag=O5C65_003098;product=deoxyribonuclease I;protein_id=HJH9173176.1;transl_table=11 DALFDA020000020.1 tpg gene 59658 60389 . + . ID=gene-O5C65_003099;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=O5C65_003099 DALFDA020000020.1 Protein Homology CDS 59658 60389 . + 0 ID=cds-HJH9173177.1;Parent=gene-O5C65_003099;Dbxref=NCBI_GP:HJH9173177.1;Name=HJH9173177.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=O5C65_003099;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=HJH9173177.1;transl_table=11 DALFDA020000020.1 tpg gene 60409 61356 . + . ID=gene-O5C65_003100;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=O5C65_003100 DALFDA020000020.1 Protein Homology CDS 60409 61356 . + 0 ID=cds-HJH9173178.1;Parent=gene-O5C65_003100;Dbxref=NCBI_GP:HJH9173178.1;Name=HJH9173178.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462011.1;locus_tag=O5C65_003100;product=glutathione synthase;protein_id=HJH9173178.1;transl_table=11 DALFDA020000020.1 tpg gene 61572 62135 . + . ID=gene-O5C65_003101;Name=O5C65_003101;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003101 DALFDA020000020.1 Protein Homology CDS 61572 62135 . + 0 ID=cds-HJH9173179.1;Parent=gene-O5C65_003101;Dbxref=NCBI_GP:HJH9173179.1;Name=HJH9173179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=O5C65_003101;product=YqgE/AlgH family protein;protein_id=HJH9173179.1;transl_table=11 DALFDA020000020.1 tpg gene 62135 62551 . + . ID=gene-O5C65_003102;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=O5C65_003102 DALFDA020000020.1 Protein Homology CDS 62135 62551 . + 0 ID=cds-HJH9173180.1;Parent=gene-O5C65_003102;Dbxref=NCBI_GP:HJH9173180.1;Name=HJH9173180.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462013.1;locus_tag=O5C65_003102;product=Holliday junction resolvase RuvX;protein_id=HJH9173180.1;transl_table=11 DALFDA020000020.1 tpg gene 62598 63284 . - . ID=gene-O5C65_003103;Name=O5C65_003103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003103 DALFDA020000020.1 Protein Homology CDS 62598 63284 . - 0 ID=cds-HJH9173181.1;Parent=gene-O5C65_003103;Dbxref=NCBI_GP:HJH9173181.1;Name=HJH9173181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462014.1;locus_tag=O5C65_003103;product=IclR family transcriptional regulator domain-containing protein;protein_id=HJH9173181.1;transl_table=11 DALFDA020000020.1 tpg gene 63416 64396 . - . ID=gene-O5C65_003104;Name=O5C65_003104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003104 DALFDA020000020.1 Protein Homology CDS 63416 64396 . - 0 ID=cds-HJH9173182.1;Parent=gene-O5C65_003104;Dbxref=NCBI_GP:HJH9173182.1;Name=HJH9173182.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462015.1;locus_tag=O5C65_003104;product=type IV pilus twitching motility protein PilT;protein_id=HJH9173182.1;transl_table=11 DALFDA020000020.1 tpg gene 64414 65118 . + . ID=gene-O5C65_003105;Name=O5C65_003105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003105 DALFDA020000020.1 Protein Homology CDS 64414 65118 . + 0 ID=cds-HJH9173183.1;Parent=gene-O5C65_003105;Dbxref=NCBI_GP:HJH9173183.1;Name=HJH9173183.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462016.1;locus_tag=O5C65_003105;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=HJH9173183.1;transl_table=11 DALFDA020000020.1 tpg gene 65137 65703 . + . ID=gene-O5C65_003106;Name=O5C65_003106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003106 DALFDA020000020.1 Protein Homology CDS 65137 65703 . + 0 ID=cds-HJH9173184.1;Parent=gene-O5C65_003106;Dbxref=NCBI_GP:HJH9173184.1;Name=HJH9173184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462017.1;locus_tag=O5C65_003106;product=YggT family protein;protein_id=HJH9173184.1;transl_table=11 DALFDA020000020.1 tpg gene 65700 65990 . + . ID=gene-O5C65_003107;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=O5C65_003107 DALFDA020000020.1 Protein Homology CDS 65700 65990 . + 0 ID=cds-HJH9173185.1;Parent=gene-O5C65_003107;Dbxref=NCBI_GP:HJH9173185.1;Name=HJH9173185.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462018.1;locus_tag=O5C65_003107;product=DUF167 family protein YggU;protein_id=HJH9173185.1;transl_table=11 DALFDA020000020.1 tpg gene 65998 66591 . + . ID=gene-O5C65_003108;Name=O5C65_003108;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003108 DALFDA020000020.1 Protein Homology CDS 65998 66591 . + 0 ID=cds-HJH9173186.1;Parent=gene-O5C65_003108;Dbxref=NCBI_GP:HJH9173186.1;Name=HJH9173186.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462019.1;locus_tag=O5C65_003108;product=XTP/dITP diphosphatase;protein_id=HJH9173186.1;transl_table=11 DALFDA020000020.1 tpg gene 66584 67720 . + . ID=gene-O5C65_003109;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=O5C65_003109 DALFDA020000020.1 Protein Homology CDS 66584 67720 . + 0 ID=cds-HJH9173187.1;Parent=gene-O5C65_003109;Dbxref=NCBI_GP:HJH9173187.1;Name=HJH9173187.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462020.1;locus_tag=O5C65_003109;product=radical SAM family heme chaperone HemW;protein_id=HJH9173187.1;transl_table=11 DALFDA020000020.1 tpg gene 67812 68819 . - . ID=gene-O5C65_003110;Name=O5C65_003110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003110 DALFDA020000020.1 Protein Homology CDS 67812 68819 . - 0 ID=cds-HJH9173188.1;Parent=gene-O5C65_003110;Dbxref=NCBI_GP:HJH9173188.1;Name=HJH9173188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462021.1;locus_tag=O5C65_003110;product=DUF1202 domain-containing protein;protein_id=HJH9173188.1;transl_table=11 DALFDA020000020.1 tpg gene 68952 69998 . - . ID=gene-O5C65_003111;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=O5C65_003111 DALFDA020000020.1 Protein Homology CDS 68952 69998 . - 0 ID=cds-HJH9173189.1;Parent=gene-O5C65_003111;Dbxref=NCBI_GP:HJH9173189.1;Name=HJH9173189.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462022.1;locus_tag=O5C65_003111;product=L-asparaginase 2;protein_id=HJH9173189.1;transl_table=11 DALFDA020000020.1 tpg gene 70187 70906 . - . ID=gene-O5C65_003112;Name=O5C65_003112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003112 DALFDA020000020.1 Protein Homology CDS 70187 70906 . - 0 ID=cds-HJH9173190.1;Parent=gene-O5C65_003112;Dbxref=NCBI_GP:HJH9173190.1;Name=HJH9173190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462023.1;locus_tag=O5C65_003112;product=DUF2884 domain-containing protein;protein_id=HJH9173190.1;transl_table=11 DALFDA020000020.1 tpg gene 70956 71282 . - . ID=gene-O5C65_003113;Name=O5C65_003113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003113 DALFDA020000020.1 Protein Homology CDS 70956 71282 . - 0 ID=cds-HJH9173191.1;Parent=gene-O5C65_003113;Dbxref=NCBI_GP:HJH9173191.1;Name=HJH9173191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462024.1;locus_tag=O5C65_003113;product=YggL family protein;protein_id=HJH9173191.1;transl_table=11 DALFDA020000020.1 tpg gene 71282 72001 . - . ID=gene-O5C65_003114;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=O5C65_003114 DALFDA020000020.1 Protein Homology CDS 71282 72001 . - 0 ID=cds-HJH9173192.1;Parent=gene-O5C65_003114;Dbxref=NCBI_GP:HJH9173192.1;Name=HJH9173192.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462025.1;locus_tag=O5C65_003114;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=HJH9173192.1;transl_table=11 DALFDA020000020.1 tpg gene 72156 73208 . + . ID=gene-O5C65_003115;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=O5C65_003115 DALFDA020000020.1 Protein Homology CDS 72156 73208 . + 0 ID=cds-HJH9173193.1;Parent=gene-O5C65_003115;Dbxref=NCBI_GP:HJH9173193.1;Name=HJH9173193.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462026.1;locus_tag=O5C65_003115;product=A/G-specific adenine glycosylase;protein_id=HJH9173193.1;transl_table=11 DALFDA020000020.1 tpg gene 73236 73511 . + . ID=gene-O5C65_003116;Name=O5C65_003116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003116 DALFDA020000020.1 Protein Homology CDS 73236 73511 . + 0 ID=cds-HJH9173194.1;Parent=gene-O5C65_003116;Dbxref=NCBI_GP:HJH9173194.1;Name=HJH9173194.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462027.1;locus_tag=O5C65_003116;product=oxidative damage protection protein;protein_id=HJH9173194.1;transl_table=11 DALFDA020000020.1 tpg gene 73624 74709 . + . ID=gene-O5C65_003117;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=O5C65_003117 DALFDA020000020.1 Protein Homology CDS 73624 74709 . + 0 ID=cds-HJH9173195.1;Parent=gene-O5C65_003117;Dbxref=NCBI_GP:HJH9173195.1;Name=HJH9173195.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462028.1;locus_tag=O5C65_003117;product=membrane-bound lytic murein transglycosylase MltC;protein_id=HJH9173195.1;transl_table=11 DALFDA020000020.1 tpg gene 74926 76182 . + . ID=gene-O5C65_003118;Name=O5C65_003118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003118 DALFDA020000020.1 Protein Homology CDS 74926 76182 . + 0 ID=cds-HJH9173196.1;Parent=gene-O5C65_003118;Dbxref=NCBI_GP:HJH9173196.1;Name=HJH9173196.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462029.1;locus_tag=O5C65_003118;product=nucleoside permease;protein_id=HJH9173196.1;transl_table=11 DALFDA020000020.1 tpg gene 76244 78379 . - . ID=gene-O5C65_003119;Name=O5C65_003119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003119 DALFDA020000020.1 Protein Homology CDS 76244 78379 . - 0 ID=cds-HJH9173197.1;Parent=gene-O5C65_003119;Dbxref=NCBI_GP:HJH9173197.1;Name=HJH9173197.1;Ontology_term=GO:0006596,GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;go_process=polyamine biosynthetic process|0006596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462030.1;locus_tag=O5C65_003119;product=ornithine decarboxylase;protein_id=HJH9173197.1;transl_table=11 DALFDA020000020.1 tpg gene 78805 79512 . + . ID=gene-O5C65_003120;Name=O5C65_003120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003120 DALFDA020000020.1 Protein Homology CDS 78805 79512 . + 0 ID=cds-HJH9173198.1;Parent=gene-O5C65_003120;Dbxref=NCBI_GP:HJH9173198.1;Name=HJH9173198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462031.1;locus_tag=O5C65_003120;product=DUF554 domain-containing protein;protein_id=HJH9173198.1;transl_table=11 DALFDA020000020.1 tpg gene 79618 79693 . + . ID=gene-O5C65_003121;Name=O5C65_003121;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_003121 DALFDA020000020.1 tRNAscan-SE tRNA 79618 79693 . + . ID=rna-O5C65_003121;Parent=gene-O5C65_003121;anticodon=(pos:79651..79653);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003121;product=tRNA-Phe DALFDA020000020.1 tRNAscan-SE exon 79618 79693 . + . ID=exon-O5C65_003121-1;Parent=rna-O5C65_003121;anticodon=(pos:79651..79653);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003121;product=tRNA-Phe DALFDA020000020.1 tpg pseudogene 79917 80892 . - . ID=gene-O5C65_003122;Name=O5C65_003122;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_003122;pseudo=true DALFDA020000020.1 Protein Homology CDS 79917 80892 . - 0 ID=cds-O5C65_003122;Parent=gene-O5C65_003122;Note=frameshifted;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750791.1;locus_tag=O5C65_003122;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 DALFDA020000020.1 tpg gene 81026 82537 . - . ID=gene-O5C65_003123;Name=O5C65_003123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003123 DALFDA020000020.1 Protein Homology CDS 81026 82537 . - 0 ID=cds-HJH9173199.1;Parent=gene-O5C65_003123;Dbxref=NCBI_GP:HJH9173199.1;Name=HJH9173199.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03760.1;locus_tag=O5C65_003123;product=TraI domain-containing protein;protein_id=HJH9173199.1;transl_table=11 DALFDA020000020.1 tpg gene 82485 83990 . - . ID=gene-O5C65_003124;Name=O5C65_003124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003124 DALFDA020000020.1 Protein Homology CDS 82485 83990 . - 0 ID=cds-HJH9173200.1;Parent=gene-O5C65_003124;Dbxref=NCBI_GP:HJH9173200.1;Name=HJH9173200.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000060048.1;locus_tag=O5C65_003124;product=UvrD-helicase domain-containing protein;protein_id=HJH9173200.1;transl_table=11 DALFDA020000020.1 tpg gene 84556 84894 . + . ID=gene-O5C65_003125;Name=O5C65_003125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003125 DALFDA020000020.1 Protein Homology CDS 84556 84894 . + 0 ID=cds-HJH9173201.1;Parent=gene-O5C65_003125;Dbxref=NCBI_GP:HJH9173201.1;Name=HJH9173201.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024864.6;locus_tag=O5C65_003125;product=cupredoxin domain-containing protein;protein_id=HJH9173201.1;transl_table=11 DALFDA020000020.1 tpg gene 84891 85697 . + . ID=gene-O5C65_003126;Name=O5C65_003126;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003126 DALFDA020000020.1 Protein Homology CDS 84891 85697 . + 0 ID=cds-HJH9173202.1;Parent=gene-O5C65_003126;Dbxref=NCBI_GP:HJH9173202.1;Name=HJH9173202.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: protein motif:HMM:NF015213.6;locus_tag=O5C65_003126;product=FTR1 family iron permease;protein_id=HJH9173202.1;transl_table=11 DALFDA020000020.1 tpg gene 85694 86209 . + . ID=gene-O5C65_003127;Name=O5C65_003127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003127 DALFDA020000020.1 Protein Homology CDS 85694 86209 . + 0 ID=cds-HJH9173203.1;Parent=gene-O5C65_003127;Dbxref=NCBI_GP:HJH9173203.1;Name=HJH9173203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750795.1;locus_tag=O5C65_003127;product=iron transporter;protein_id=HJH9173203.1;transl_table=11 DALFDA020000020.1 tpg gene 86253 87167 . + . ID=gene-O5C65_003128;Name=O5C65_003128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003128 DALFDA020000020.1 Protein Homology CDS 86253 87167 . + 0 ID=cds-HJH9173204.1;Parent=gene-O5C65_003128;Dbxref=NCBI_GP:HJH9173204.1;Name=HJH9173204.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF015100.6;locus_tag=O5C65_003128;product=RnfABCDGE type electron transport complex subunit D;protein_id=HJH9173204.1;transl_table=11 DALFDA020000020.1 tpg gene 87157 89238 . + . ID=gene-O5C65_003129;Name=O5C65_003129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003129 DALFDA020000020.1 Protein Homology CDS 87157 89238 . + 0 ID=cds-HJH9173205.1;Parent=gene-O5C65_003129;Dbxref=NCBI_GP:HJH9173205.1;Name=HJH9173205.1;Ontology_term=GO:0006825,GO:0005375,GO:0005507,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=copper ion transmembrane transporter activity|0005375||IEA,copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750798.1;locus_tag=O5C65_003129;product=TonB-dependent copper receptor;protein_id=HJH9173205.1;transl_table=11 DALFDA020000020.1 tpg gene 89921 90391 . + . ID=gene-O5C65_003130;Name=O5C65_003130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003130 DALFDA020000020.1 Protein Homology CDS 89921 90391 . + 0 ID=cds-HJH9173206.1;Parent=gene-O5C65_003130;Dbxref=NCBI_GP:HJH9173206.1;Name=HJH9173206.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: protein motif:HMM:NF018838.6;locus_tag=O5C65_003130;product=CaiF/GrlA family transcriptional regulator;protein_id=HJH9173206.1;transl_table=11 DALFDA020000020.1 tpg gene 90480 90878 . - . ID=gene-O5C65_003131;Name=O5C65_003131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003131 DALFDA020000020.1 Protein Homology CDS 90480 90878 . - 0 ID=cds-HJH9173207.1;Parent=gene-O5C65_003131;Dbxref=NCBI_GP:HJH9173207.1;Name=HJH9173207.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750800.1;locus_tag=O5C65_003131;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=HJH9173207.1;transl_table=11 DALFDA020000020.1 tpg gene 90914 91132 . - . ID=gene-O5C65_003132;Name=O5C65_003132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003132 DALFDA020000020.1 Protein Homology CDS 90914 91132 . - 0 ID=cds-HJH9173208.1;Parent=gene-O5C65_003132;Dbxref=NCBI_GP:HJH9173208.1;Name=HJH9173208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750801.1;locus_tag=O5C65_003132;product=YdcH family protein;protein_id=HJH9173208.1;transl_table=11 DALFDA020000020.1 tpg gene 91876 93018 . - . ID=gene-O5C65_003133;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=O5C65_003133 DALFDA020000020.1 Protein Homology CDS 91876 93018 . - 0 ID=cds-HJH9173209.1;Parent=gene-O5C65_003133;Dbxref=NCBI_GP:HJH9173209.1;Name=HJH9173209.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750802.1;locus_tag=O5C65_003133;product=porin OmpC;protein_id=HJH9173209.1;transl_table=11 DALFDA020000020.1 tpg gene 93378 93569 . - . ID=gene-O5C65_003134;Name=O5C65_003134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003134 DALFDA020000020.1 Protein Homology CDS 93378 93569 . - 0 ID=cds-HJH9173210.1;Parent=gene-O5C65_003134;Dbxref=NCBI_GP:HJH9173210.1;Name=HJH9173210.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033650.1;locus_tag=O5C65_003134;product=ANR family transcriptional regulator;protein_id=HJH9173210.1;transl_table=11 DALFDA020000020.1 tpg gene 94355 95098 . + . ID=gene-O5C65_003135;Name=O5C65_003135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003135 DALFDA020000020.1 Protein Homology CDS 94355 95098 . + 0 ID=cds-HJH9173211.1;Parent=gene-O5C65_003135;Dbxref=NCBI_GP:HJH9173211.1;Name=HJH9173211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750804.1;locus_tag=O5C65_003135;product=CZB domain-containing protein;protein_id=HJH9173211.1;transl_table=11 DALFDA020000020.1 tpg gene 95928 96239 . + . ID=gene-O5C65_003136;Name=O5C65_003136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003136 DALFDA020000020.1 Protein Homology CDS 95928 96239 . + 0 ID=cds-HJH9173212.1;Parent=gene-O5C65_003136;Dbxref=NCBI_GP:HJH9173212.1;Name=HJH9173212.1;Ontology_term=GO:0044780,GO:0045893;gbkey=CDS;go_process=bacterial-type flagellum assembly|0044780||IEA,positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: protein motif:HMM:NF017094.6;locus_tag=O5C65_003136;product=flagellar transcriptional regulator FlhD;protein_id=HJH9173212.1;transl_table=11 DALFDA020000020.1 tpg gene 96229 96744 . + . ID=gene-O5C65_003137;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=O5C65_003137 DALFDA020000020.1 Protein Homology CDS 96229 96744 . + 0 ID=cds-HJH9173213.1;Parent=gene-O5C65_003137;Dbxref=NCBI_GP:HJH9173213.1;Name=HJH9173213.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750806.1;locus_tag=O5C65_003137;product=flagellar transcriptional regulator FlhC;protein_id=HJH9173213.1;transl_table=11 DALFDA020000020.1 tpg gene 97110 97988 . - . ID=gene-O5C65_003138;Name=O5C65_003138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003138 DALFDA020000020.1 Protein Homology CDS 97110 97988 . - 0 ID=cds-HJH9173214.1;Parent=gene-O5C65_003138;Dbxref=NCBI_GP:HJH9173214.1;Name=HJH9173214.1;Ontology_term=GO:0030001,GO:0005524,GO:0042626,GO:0046872,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,ABC-type transporter activity|0140359||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228404.1;locus_tag=O5C65_003138;product=metal ABC transporter substrate-binding protein;protein_id=HJH9173214.1;transl_table=11 DALFDA020000020.1 tpg gene 98003 98863 . - . ID=gene-O5C65_003139;Name=O5C65_003139;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003139 DALFDA020000020.1 Protein Homology CDS 98003 98863 . - 0 ID=cds-HJH9173215.1;Parent=gene-O5C65_003139;Dbxref=NCBI_GP:HJH9173215.1;Name=HJH9173215.1;Ontology_term=GO:0055085,GO:0042626,GO:0005886,GO:0043190;gbkey=CDS;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571669.1;locus_tag=O5C65_003139;product=metal ABC transporter permease;protein_id=HJH9173215.1;transl_table=11 DALFDA020000020.1 tpg gene 98860 99525 . - . ID=gene-O5C65_003140;Name=O5C65_003140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003140 DALFDA020000020.1 Protein Homology CDS 98860 99525 . - 0 ID=cds-HJH9173216.1;Parent=gene-O5C65_003140;Dbxref=NCBI_GP:HJH9173216.1;Name=HJH9173216.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750809.1;locus_tag=O5C65_003140;product=metal ABC transporter ATP-binding protein;protein_id=HJH9173216.1;transl_table=11 DALFDA020000020.1 tpg gene 100452 100709 . - . ID=gene-O5C65_003141;Name=O5C65_003141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003141 DALFDA020000020.1 GeneMarkS-2+ CDS 100452 100709 . - 0 ID=cds-HJH9173217.1;Parent=gene-O5C65_003141;Dbxref=NCBI_GP:HJH9173217.1;Name=HJH9173217.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_003141;product=hypothetical protein;protein_id=HJH9173217.1;transl_table=11 DALFDA020000020.1 tpg gene 100762 101280 . - . ID=gene-O5C65_003142;Name=O5C65_003142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003142 DALFDA020000020.1 GeneMarkS-2+ CDS 100762 101280 . - 0 ID=cds-HJH9173218.1;Parent=gene-O5C65_003142;Dbxref=NCBI_GP:HJH9173218.1;Name=HJH9173218.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_003142;product=hypothetical protein;protein_id=HJH9173218.1;transl_table=11 DALFDA020000020.1 tpg gene 101965 104016 . - . ID=gene-O5C65_003143;Name=O5C65_003143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003143 DALFDA020000020.1 Protein Homology CDS 101965 104016 . - 0 ID=cds-HJH9173219.1;Parent=gene-O5C65_003143;Dbxref=NCBI_GP:HJH9173219.1;Name=HJH9173219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750812.1;locus_tag=O5C65_003143;product=IreA family TonB-dependent siderophore receptor;protein_id=HJH9173219.1;transl_table=11 DALFDA020000020.1 tpg gene 105000 107177 . + . ID=gene-O5C65_003144;Name=O5C65_003144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003144 DALFDA020000020.1 Protein Homology CDS 105000 107177 . + 0 ID=cds-HJH9173220.1;Parent=gene-O5C65_003144;Dbxref=NCBI_GP:HJH9173220.1;Name=HJH9173220.1;Ontology_term=GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: protein motif:HMM:NF012801.6;locus_tag=O5C65_003144;product=TonB-dependent receptor;protein_id=HJH9173220.1;transl_table=11 ##sequence-region DALFDA020000021.1 1 106774 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000021.1 tpg region 1 106774 . + . ID=DALFDA020000021.1:1..106774;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000021.1 tpg gene 73 543 . - . ID=gene-O5C65_003145;Name=O5C65_003145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003145 DALFDA020000021.1 Protein Homology CDS 73 543 . - 0 ID=cds-HJH9173221.1;Parent=gene-O5C65_003145;Dbxref=NCBI_GP:HJH9173221.1;Name=HJH9173221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750463.1;locus_tag=O5C65_003145;product=universal stress protein;protein_id=HJH9173221.1;transl_table=11 DALFDA020000021.1 tpg gene 1020 3824 . - . ID=gene-O5C65_003146;Name=O5C65_003146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003146 DALFDA020000021.1 Protein Homology CDS 1020 3824 . - 0 ID=cds-HJH9173222.1;Parent=gene-O5C65_003146;Dbxref=NCBI_GP:HJH9173222.1;Name=HJH9173222.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012822421.1;locus_tag=O5C65_003146;product=conjugative transfer ATPase;protein_id=HJH9173222.1;transl_table=11 DALFDA020000021.1 tpg gene 3825 4232 . - . ID=gene-O5C65_003147;Name=O5C65_003147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003147 DALFDA020000021.1 Protein Homology CDS 3825 4232 . - 0 ID=cds-HJH9173223.1;Parent=gene-O5C65_003147;Dbxref=NCBI_GP:HJH9173223.1;Name=HJH9173223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011145435.1;locus_tag=O5C65_003147;product=TIGR03751 family conjugal transfer lipoprotein;protein_id=HJH9173223.1;transl_table=11 DALFDA020000021.1 tpg gene 4253 5737 . - . ID=gene-O5C65_003148;Name=O5C65_003148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003148 DALFDA020000021.1 Protein Homology CDS 4253 5737 . - 0 ID=cds-HJH9173224.1;Parent=gene-O5C65_003148;Dbxref=NCBI_GP:HJH9173224.1;Name=HJH9173224.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224030.1;locus_tag=O5C65_003148;product=TIGR03752 family integrating conjugative element protein;protein_id=HJH9173224.1;transl_table=11 DALFDA020000021.1 tpg gene 5737 6633 . - . ID=gene-O5C65_003149;Name=O5C65_003149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003149 DALFDA020000021.1 Protein Homology CDS 5737 6633 . - 0 ID=cds-HJH9173225.1;Parent=gene-O5C65_003149;Dbxref=NCBI_GP:HJH9173225.1;Name=HJH9173225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372617.1;locus_tag=O5C65_003149;product=TIGR03749 family integrating conjugative element protein;protein_id=HJH9173225.1;transl_table=11 DALFDA020000021.1 tpg gene 6630 7286 . - . ID=gene-O5C65_003150;Name=O5C65_003150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003150 DALFDA020000021.1 Protein Homology CDS 6630 7286 . - 0 ID=cds-HJH9173226.1;Parent=gene-O5C65_003150;Dbxref=NCBI_GP:HJH9173226.1;Name=HJH9173226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000086082.1;locus_tag=O5C65_003150;product=PFL_4703 family integrating conjugative element protein;protein_id=HJH9173226.1;transl_table=11 DALFDA020000021.1 tpg gene 7286 7666 . - . ID=gene-O5C65_003151;Name=O5C65_003151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003151 DALFDA020000021.1 Protein Homology CDS 7286 7666 . - 0 ID=cds-HJH9173227.1;Parent=gene-O5C65_003151;Dbxref=NCBI_GP:HJH9173227.1;Name=HJH9173227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750465.1;locus_tag=O5C65_003151;product=TIGR03750 family conjugal transfer protein;protein_id=HJH9173227.1;transl_table=11 DALFDA020000021.1 tpg gene 7682 8020 . - . ID=gene-O5C65_003152;Name=O5C65_003152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003152 DALFDA020000021.1 Protein Homology CDS 7682 8020 . - 0 ID=cds-HJH9173228.1;Parent=gene-O5C65_003152;Dbxref=NCBI_GP:HJH9173228.1;Name=HJH9173228.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750466.1;locus_tag=O5C65_003152;product=TIGR03745 family integrating conjugative element membrane protein;protein_id=HJH9173228.1;transl_table=11 DALFDA020000021.1 tpg gene 8037 8273 . - . ID=gene-O5C65_003153;Name=O5C65_003153;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003153 DALFDA020000021.1 Protein Homology CDS 8037 8273 . - 0 ID=cds-HJH9173229.1;Parent=gene-O5C65_003153;Dbxref=NCBI_GP:HJH9173229.1;Name=HJH9173229.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750467.1;locus_tag=O5C65_003153;product=TIGR03758 family integrating conjugative element protein;protein_id=HJH9173229.1;transl_table=11 DALFDA020000021.1 tpg gene 8270 8584 . - . ID=gene-O5C65_003154;Name=O5C65_003154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003154 DALFDA020000021.1 Protein Homology CDS 8270 8584 . - 0 ID=cds-HJH9173230.1;Parent=gene-O5C65_003154;Dbxref=NCBI_GP:HJH9173230.1;Name=HJH9173230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750468.1;locus_tag=O5C65_003154;product=RAQPRD family integrative conjugative element protein;protein_id=HJH9173230.1;transl_table=11 DALFDA020000021.1 tpg gene 8706 8828 . - . ID=gene-O5C65_003155;Name=O5C65_003155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003155 DALFDA020000021.1 GeneMarkS-2+ CDS 8706 8828 . - 0 ID=cds-HJH9173231.1;Parent=gene-O5C65_003155;Dbxref=NCBI_GP:HJH9173231.1;Name=HJH9173231.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_003155;product=hypothetical protein;protein_id=HJH9173231.1;transl_table=11 DALFDA020000021.1 tpg gene 8954 9676 . - . ID=gene-O5C65_003156;Name=O5C65_003156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003156 DALFDA020000021.1 Protein Homology CDS 8954 9676 . - 0 ID=cds-HJH9173232.1;Parent=gene-O5C65_003156;Dbxref=NCBI_GP:HJH9173232.1;Name=HJH9173232.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025062.6;locus_tag=O5C65_003156;product=CZB domain-containing protein;protein_id=HJH9173232.1;transl_table=11 DALFDA020000021.1 tpg gene 9877 10782 . - . ID=gene-O5C65_003157;Name=O5C65_003157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003157 DALFDA020000021.1 Protein Homology CDS 9877 10782 . - 0 ID=cds-HJH9173233.1;Parent=gene-O5C65_003157;Dbxref=NCBI_GP:HJH9173233.1;Name=HJH9173233.1;Ontology_term=GO:0030001,GO:0005524,GO:0042626,GO:0046872,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,ABC-type transporter activity|0140359||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750470.1;locus_tag=O5C65_003157;product=metal ABC transporter substrate-binding protein;protein_id=HJH9173233.1;transl_table=11 DALFDA020000021.1 tpg gene 11165 11401 . + . ID=gene-O5C65_003158;Name=O5C65_003158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003158 DALFDA020000021.1 GeneMarkS-2+ CDS 11165 11401 . + 0 ID=cds-HJH9173234.1;Parent=gene-O5C65_003158;Dbxref=NCBI_GP:HJH9173234.1;Name=HJH9173234.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_003158;product=hypothetical protein;protein_id=HJH9173234.1;transl_table=11 DALFDA020000021.1 tpg gene 11534 12280 . - . ID=gene-O5C65_003159;Name=O5C65_003159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003159 DALFDA020000021.1 Protein Homology CDS 11534 12280 . - 0 ID=cds-HJH9173235.1;Parent=gene-O5C65_003159;Dbxref=NCBI_GP:HJH9173235.1;Name=HJH9173235.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750473.1;locus_tag=O5C65_003159;product=TIGR03747 family integrating conjugative element membrane protein;protein_id=HJH9173235.1;transl_table=11 DALFDA020000021.1 tpg gene 12280 14484 . - . ID=gene-O5C65_003160;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=O5C65_003160 DALFDA020000021.1 Protein Homology CDS 12280 14484 . - 0 ID=cds-HJH9173236.1;Parent=gene-O5C65_003160;Dbxref=NCBI_GP:HJH9173236.1;Name=HJH9173236.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750475.1;locus_tag=O5C65_003160;product=type IV conjugative transfer system coupling protein TraD;protein_id=HJH9173236.1;transl_table=11 DALFDA020000021.1 tpg gene 14573 15079 . - . ID=gene-O5C65_003161;Name=O5C65_003161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003161 DALFDA020000021.1 Protein Homology CDS 14573 15079 . - 0 ID=cds-HJH9173237.1;Parent=gene-O5C65_003161;Dbxref=NCBI_GP:HJH9173237.1;Name=HJH9173237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809424.1;locus_tag=O5C65_003161;product=integrating conjugative element protein;protein_id=HJH9173237.1;transl_table=11 DALFDA020000021.1 tpg gene 15147 15827 . - . ID=gene-O5C65_003162;Name=O5C65_003162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003162 DALFDA020000021.1 Protein Homology CDS 15147 15827 . - 0 ID=cds-HJH9173238.1;Parent=gene-O5C65_003162;Dbxref=NCBI_GP:HJH9173238.1;Name=HJH9173238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750477.1;locus_tag=O5C65_003162;product=transglycosylase SLT domain-containing protein;protein_id=HJH9173238.1;transl_table=11 DALFDA020000021.1 tpg gene 15806 16588 . - . ID=gene-O5C65_003163;Name=O5C65_003163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003163 DALFDA020000021.1 Protein Homology CDS 15806 16588 . - 0 ID=cds-HJH9173239.1;Parent=gene-O5C65_003163;Dbxref=NCBI_GP:HJH9173239.1;Name=HJH9173239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750478.1;locus_tag=O5C65_003163;product=TIGR03759 family integrating conjugative element protein;protein_id=HJH9173239.1;transl_table=11 DALFDA020000021.1 tpg gene 16611 17573 . - . ID=gene-O5C65_003164;Name=O5C65_003164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003164 DALFDA020000021.1 Protein Homology CDS 16611 17573 . - 0 ID=cds-HJH9173240.1;Parent=gene-O5C65_003164;Dbxref=NCBI_GP:HJH9173240.1;Name=HJH9173240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000214158.1;locus_tag=O5C65_003164;product=hypothetical protein;protein_id=HJH9173240.1;transl_table=11 DALFDA020000021.1 tpg gene 18390 18551 . - . ID=gene-O5C65_003165;Name=O5C65_003165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003165 DALFDA020000021.1 GeneMarkS-2+ CDS 18390 18551 . - 0 ID=cds-HJH9173241.1;Parent=gene-O5C65_003165;Dbxref=NCBI_GP:HJH9173241.1;Name=HJH9173241.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_003165;product=hypothetical protein;protein_id=HJH9173241.1;transl_table=11 DALFDA020000021.1 tpg gene 18598 19494 . - . ID=gene-O5C65_003166;Name=O5C65_003166;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003166 DALFDA020000021.1 Protein Homology CDS 18598 19494 . - 0 ID=cds-HJH9173242.1;Parent=gene-O5C65_003166;Dbxref=NCBI_GP:HJH9173242.1;Name=HJH9173242.1;Ontology_term=GO:0032775,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009114919.1;locus_tag=O5C65_003166;product=DNA adenine methylase;protein_id=HJH9173242.1;transl_table=11 DALFDA020000021.1 tpg gene 19808 20056 . - . ID=gene-O5C65_003167;Name=O5C65_003167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003167 DALFDA020000021.1 Protein Homology CDS 19808 20056 . - 0 ID=cds-HJH9173243.1;Parent=gene-O5C65_003167;Dbxref=NCBI_GP:HJH9173243.1;Name=HJH9173243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750481.1;locus_tag=O5C65_003167;product=DUF4222 domain-containing protein;protein_id=HJH9173243.1;transl_table=11 DALFDA020000021.1 tpg gene 20056 20247 . - . ID=gene-O5C65_003168;Name=O5C65_003168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003168 DALFDA020000021.1 GeneMarkS-2+ CDS 20056 20247 . - 0 ID=cds-HJH9173244.1;Parent=gene-O5C65_003168;Dbxref=NCBI_GP:HJH9173244.1;Name=HJH9173244.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_003168;product=hypothetical protein;protein_id=HJH9173244.1;transl_table=11 DALFDA020000021.1 tpg gene 20687 20989 . - . ID=gene-O5C65_003169;Name=O5C65_003169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003169 DALFDA020000021.1 GeneMarkS-2+ CDS 20687 20989 . - 0 ID=cds-HJH9173245.1;Parent=gene-O5C65_003169;Dbxref=NCBI_GP:HJH9173245.1;Name=HJH9173245.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_003169;product=hypothetical protein;protein_id=HJH9173245.1;transl_table=11 DALFDA020000021.1 tpg gene 21713 22312 . + . ID=gene-O5C65_003170;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=O5C65_003170 DALFDA020000021.1 Protein Homology CDS 21713 22312 . + 0 ID=cds-HJH9173246.1;Parent=gene-O5C65_003170;Dbxref=NCBI_GP:HJH9173246.1;Name=HJH9173246.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005281771.1;locus_tag=O5C65_003170;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=HJH9173246.1;transl_table=11 DALFDA020000021.1 tpg gene 22275 23414 . - . ID=gene-O5C65_003171;Name=O5C65_003171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003171 DALFDA020000021.1 Protein Homology CDS 22275 23414 . - 0 ID=cds-HJH9173247.1;Parent=gene-O5C65_003171;Dbxref=NCBI_GP:HJH9173247.1;Name=HJH9173247.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750485.1;locus_tag=O5C65_003171;product=tyrosine-type recombinase/integrase;protein_id=HJH9173247.1;transl_table=11 DALFDA020000021.1 tpg pseudogene 23525 24025 . - . ID=gene-O5C65_003172;Name=O5C65_003172;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_003172;pseudo=true DALFDA020000021.1 Protein Homology CDS 23525 24025 . - 0 ID=cds-O5C65_003172;Parent=gene-O5C65_003172;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892055.1;locus_tag=O5C65_003172;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 DALFDA020000021.1 tpg pseudogene 24293 25069 . - . ID=gene-O5C65_003173;Name=O5C65_003173;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_003173;pseudo=true DALFDA020000021.1 Protein Homology CDS 24293 25069 . - 0 ID=cds-O5C65_003173;Parent=gene-O5C65_003173;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF014281.6;locus_tag=O5C65_003173;product=Tar ligand binding domain-containing protein;pseudo=true;transl_table=11 DALFDA020000021.1 tpg pseudogene 25179 25562 . + . ID=gene-O5C65_003174;Name=O5C65_003174;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_003174;pseudo=true DALFDA020000021.1 Protein Homology CDS 25179 25562 . + 0 ID=cds-O5C65_003174;Parent=gene-O5C65_003174;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000744278.1;locus_tag=O5C65_003174;product=phage tail protein;pseudo=true;transl_table=11 DALFDA020000021.1 tpg gene 26065 27291 . - . ID=gene-O5C65_003175;Name=pilV;gbkey=Gene;gene=pilV;gene_biotype=protein_coding;locus_tag=O5C65_003175 DALFDA020000021.1 Protein Homology CDS 26065 27291 . - 0 ID=cds-HJH9173248.1;Parent=gene-O5C65_003175;Dbxref=NCBI_GP:HJH9173248.1;Name=HJH9173248.1;gbkey=CDS;gene=pilV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000527441.1;locus_tag=O5C65_003175;product=shufflon system plasmid conjugative transfer pilus tip adhesin PilV;protein_id=HJH9173248.1;transl_table=11 DALFDA020000021.1 tpg gene 27291 27965 . - . ID=gene-O5C65_003176;Name=O5C65_003176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003176 DALFDA020000021.1 Protein Homology CDS 27291 27965 . - 0 ID=cds-HJH9173249.1;Parent=gene-O5C65_003176;Dbxref=NCBI_GP:HJH9173249.1;Name=HJH9173249.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: protein motif:HMM:NF013632.6;locus_tag=O5C65_003176;product=prepilin peptidase;protein_id=HJH9173249.1;transl_table=11 DALFDA020000021.1 tpg gene 27962 28111 . - . ID=gene-O5C65_003177;Name=O5C65_003177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003177 DALFDA020000021.1 GeneMarkS-2+ CDS 27962 28111 . - 0 ID=cds-HJH9173250.1;Parent=gene-O5C65_003177;Dbxref=NCBI_GP:HJH9173250.1;Name=HJH9173250.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_003177;product=hypothetical protein;protein_id=HJH9173250.1;transl_table=11 DALFDA020000021.1 tpg gene 28108 28641 . - . ID=gene-O5C65_003178;Name=O5C65_003178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003178 DALFDA020000021.1 Protein Homology CDS 28108 28641 . - 0 ID=cds-HJH9173251.1;Parent=gene-O5C65_003178;Dbxref=NCBI_GP:HJH9173251.1;Name=HJH9173251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750491.1;locus_tag=O5C65_003178;product=lytic transglycosylase domain-containing protein;protein_id=HJH9173251.1;transl_table=11 DALFDA020000021.1 tpg gene 28669 29280 . - . ID=gene-O5C65_003179;Name=O5C65_003179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003179 DALFDA020000021.1 Protein Homology CDS 28669 29280 . - 0 ID=cds-HJH9173252.1;Parent=gene-O5C65_003179;Dbxref=NCBI_GP:HJH9173252.1;Name=HJH9173252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750492.1;locus_tag=O5C65_003179;product=type 4 pilus major pilin;protein_id=HJH9173252.1;transl_table=11 DALFDA020000021.1 tpg gene 29329 30447 . - . ID=gene-O5C65_003180;Name=O5C65_003180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003180 DALFDA020000021.1 Protein Homology CDS 29329 30447 . - 0 ID=cds-HJH9173253.1;Parent=gene-O5C65_003180;Dbxref=NCBI_GP:HJH9173253.1;Name=HJH9173253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750493.1;locus_tag=O5C65_003180;product=type II secretion system F family protein;protein_id=HJH9173253.1;transl_table=11 DALFDA020000021.1 tpg gene 30437 32242 . - . ID=gene-O5C65_003181;Name=O5C65_003181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003181 DALFDA020000021.1 Protein Homology CDS 30437 32242 . - 0 ID=cds-HJH9173254.1;Parent=gene-O5C65_003181;Dbxref=NCBI_GP:HJH9173254.1;Name=HJH9173254.1;Ontology_term=GO:0009306,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750494.1;locus_tag=O5C65_003181;product=GspE/PulE family protein;protein_id=HJH9173254.1;transl_table=11 DALFDA020000021.1 tpg gene 32259 32888 . - . ID=gene-O5C65_003182;Name=pilP;gbkey=Gene;gene=pilP;gene_biotype=protein_coding;locus_tag=O5C65_003182 DALFDA020000021.1 Protein Homology CDS 32259 32888 . - 0 ID=cds-HJH9173255.1;Parent=gene-O5C65_003182;Dbxref=NCBI_GP:HJH9173255.1;Name=HJH9173255.1;Ontology_term=GO:0009297;gbkey=CDS;gene=pilP;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: protein motif:HMM:TIGR03021.1;locus_tag=O5C65_003182;product=type IV pilus biogenesis protein PilP;protein_id=HJH9173255.1;transl_table=11 DALFDA020000021.1 tpg gene 32872 34167 . - . ID=gene-O5C65_003183;Name=pilO2;gbkey=Gene;gene=pilO2;gene_biotype=protein_coding;locus_tag=O5C65_003183 DALFDA020000021.1 Protein Homology CDS 32872 34167 . - 0 ID=cds-HJH9173256.1;Parent=gene-O5C65_003183;Dbxref=NCBI_GP:HJH9173256.1;Name=HJH9173256.1;gbkey=CDS;gene=pilO2;inference=COORDINATES: protein motif:HMM:NF018562.6;locus_tag=O5C65_003183;product=type 4b pilus protein PilO2;protein_id=HJH9173256.1;transl_table=11 DALFDA020000021.1 tpg gene 34169 35857 . - . ID=gene-O5C65_003184;Name=O5C65_003184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003184 DALFDA020000021.1 Protein Homology CDS 34169 35857 . - 0 ID=cds-HJH9173257.1;Parent=gene-O5C65_003184;Dbxref=NCBI_GP:HJH9173257.1;Name=HJH9173257.1;Ontology_term=GO:0009297,GO:0009306,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_process=pilus assembly|0009297||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750498.1;locus_tag=O5C65_003184;product=PilN family type IVB pilus formation outer membrane protein;protein_id=HJH9173257.1;transl_table=11 DALFDA020000021.1 tpg gene 35878 36315 . - . ID=gene-O5C65_003185;Name=pilM;gbkey=Gene;gene=pilM;gene_biotype=protein_coding;locus_tag=O5C65_003185 DALFDA020000021.1 Protein Homology CDS 35878 36315 . - 0 ID=cds-HJH9173258.1;Parent=gene-O5C65_003185;Dbxref=NCBI_GP:HJH9173258.1;Name=HJH9173258.1;gbkey=CDS;gene=pilM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750499.1;locus_tag=O5C65_003185;product=type IV pilus biogenesis protein PilM;protein_id=HJH9173258.1;transl_table=11 DALFDA020000021.1 tpg gene 36315 37574 . - . ID=gene-O5C65_003186;Name=O5C65_003186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003186 DALFDA020000021.1 Protein Homology CDS 36315 37574 . - 0 ID=cds-HJH9173259.1;Parent=gene-O5C65_003186;Dbxref=NCBI_GP:HJH9173259.1;Name=HJH9173259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750500.1;locus_tag=O5C65_003186;product=TcpQ domain-containing protein;protein_id=HJH9173259.1;transl_table=11 DALFDA020000021.1 tpg gene 37964 38248 . + . ID=gene-O5C65_003187;Name=O5C65_003187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003187 DALFDA020000021.1 Protein Homology CDS 37964 38248 . + 0 ID=cds-HJH9173260.1;Parent=gene-O5C65_003187;Dbxref=NCBI_GP:HJH9173260.1;Name=HJH9173260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001195099.1;locus_tag=O5C65_003187;product=DUF1778 domain-containing protein;protein_id=HJH9173260.1;transl_table=11 DALFDA020000021.1 tpg gene 38239 38721 . + . ID=gene-O5C65_003188;Name=O5C65_003188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003188 DALFDA020000021.1 Protein Homology CDS 38239 38721 . + 0 ID=cds-HJH9173261.1;Parent=gene-O5C65_003188;Dbxref=NCBI_GP:HJH9173261.1;Name=HJH9173261.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858192.1;locus_tag=O5C65_003188;product=GNAT family N-acetyltransferase;protein_id=HJH9173261.1;transl_table=11 DALFDA020000021.1 tpg gene 38925 39050 . - . ID=gene-O5C65_003189;Name=O5C65_003189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003189 DALFDA020000021.1 Protein Homology CDS 38925 39050 . - 0 ID=cds-HJH9173262.1;Parent=gene-O5C65_003189;Dbxref=NCBI_GP:HJH9173262.1;Name=HJH9173262.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016629.6;locus_tag=O5C65_003189;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=HJH9173262.1;transl_table=11 DALFDA020000021.1 tpg gene 39203 39706 . - . ID=gene-O5C65_003190;Name=O5C65_003190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003190 DALFDA020000021.1 Protein Homology CDS 39203 39706 . - 0 ID=cds-HJH9173263.1;Parent=gene-O5C65_003190;Dbxref=NCBI_GP:HJH9173263.1;Name=HJH9173263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151744.1;locus_tag=O5C65_003190;product=single-stranded DNA-binding protein;protein_id=HJH9173263.1;transl_table=11 DALFDA020000021.1 tpg gene 39719 39937 . - . ID=gene-O5C65_003191;Name=O5C65_003191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003191 DALFDA020000021.1 Protein Homology CDS 39719 39937 . - 0 ID=cds-HJH9173264.1;Parent=gene-O5C65_003191;Dbxref=NCBI_GP:HJH9173264.1;Name=HJH9173264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000958195.1;locus_tag=O5C65_003191;product=hypothetical protein;protein_id=HJH9173264.1;transl_table=11 DALFDA020000021.1 tpg gene 40030 40494 . - . ID=gene-O5C65_003192;Name=O5C65_003192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003192 DALFDA020000021.1 Protein Homology CDS 40030 40494 . - 0 ID=cds-HJH9173265.1;Parent=gene-O5C65_003192;Dbxref=NCBI_GP:HJH9173265.1;Name=HJH9173265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000115786.1;locus_tag=O5C65_003192;product=STY4534 family ICE replication protein;protein_id=HJH9173265.1;transl_table=11 DALFDA020000021.1 tpg gene 41193 43217 . - . ID=gene-O5C65_003193;Name=O5C65_003193;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003193 DALFDA020000021.1 Protein Homology CDS 41193 43217 . - 0 ID=cds-HJH9173266.1;Parent=gene-O5C65_003193;Dbxref=NCBI_GP:HJH9173266.1;Name=HJH9173266.1;Ontology_term=GO:0006261,GO:0006265,GO:0006310,GO:0051304,GO:0003677,GO:0003916,GO:0003917,GO:0098847;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA,sequence-specific single stranded DNA binding|0098847||IEA;go_process=DNA-templated DNA replication|0006261||IEA,DNA topological change|0006265||IEA,DNA recombination|0006310||IEA,chromosome separation|0051304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750506.1;locus_tag=O5C65_003193;product=DNA topoisomerase III;protein_id=HJH9173266.1;transl_table=11 DALFDA020000021.1 tpg gene 43226 44197 . - . ID=gene-O5C65_003194;Name=O5C65_003194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003194 DALFDA020000021.1 Protein Homology CDS 43226 44197 . - 0 ID=cds-HJH9173267.1;Parent=gene-O5C65_003194;Dbxref=NCBI_GP:HJH9173267.1;Name=HJH9173267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750507.1;locus_tag=O5C65_003194;product=PFL_4669 family integrating conjugative element protein;protein_id=HJH9173267.1;transl_table=11 DALFDA020000021.1 tpg pseudogene 44384 44584 . + . ID=gene-O5C65_003195;Name=O5C65_003195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_003195;pseudo=true DALFDA020000021.1 Protein Homology CDS 44384 44584 . + 0 ID=cds-O5C65_003195;Parent=gene-O5C65_003195;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010340155.1;locus_tag=O5C65_003195;product=integrase;pseudo=true;transl_table=11 DALFDA020000021.1 tpg gene 44730 45365 . + . ID=gene-O5C65_003196;Name=O5C65_003196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003196 DALFDA020000021.1 Protein Homology CDS 44730 45365 . + 0 ID=cds-HJH9173268.1;Parent=gene-O5C65_003196;Dbxref=NCBI_GP:HJH9173268.1;Name=HJH9173268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015701121.1;locus_tag=O5C65_003196;product=DUF2268 domain-containing protein;protein_id=HJH9173268.1;transl_table=11 DALFDA020000021.1 tpg gene 45569 46084 . + . ID=gene-O5C65_003197;Name=O5C65_003197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003197 DALFDA020000021.1 Protein Homology CDS 45569 46084 . + 0 ID=cds-HJH9173269.1;Parent=gene-O5C65_003197;Dbxref=NCBI_GP:HJH9173269.1;Name=HJH9173269.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008501271.1;locus_tag=O5C65_003197;product=GNAT family N-acetyltransferase;protein_id=HJH9173269.1;transl_table=11 DALFDA020000021.1 tpg gene 46695 47678 . - . ID=gene-O5C65_003198;Name=O5C65_003198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003198 DALFDA020000021.1 Protein Homology CDS 46695 47678 . - 0 ID=cds-HJH9173270.1;Parent=gene-O5C65_003198;Dbxref=NCBI_GP:HJH9173270.1;Name=HJH9173270.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004392887.1;locus_tag=O5C65_003198;product=HNH endonuclease;protein_id=HJH9173270.1;transl_table=11 DALFDA020000021.1 tpg gene 47635 48765 . - . ID=gene-O5C65_003199;Name=O5C65_003199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003199 DALFDA020000021.1 Protein Homology CDS 47635 48765 . - 0 ID=cds-HJH9173271.1;Parent=gene-O5C65_003199;Dbxref=NCBI_GP:HJH9173271.1;Name=HJH9173271.1;Ontology_term=GO:0006304,GO:0003677,GO:0003886,GO:0008168,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA (cytosine-5-)-methyltransferase activity|0003886||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004708294.1;locus_tag=O5C65_003199;product=DNA cytosine methyltransferase;protein_id=HJH9173271.1;transl_table=11 DALFDA020000021.1 tpg gene 49016 49498 . + . ID=gene-O5C65_003200;Name=O5C65_003200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003200 DALFDA020000021.1 Protein Homology CDS 49016 49498 . + 0 ID=cds-HJH9173272.1;Parent=gene-O5C65_003200;Dbxref=NCBI_GP:HJH9173272.1;Name=HJH9173272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001004766.1;locus_tag=O5C65_003200;product=hypothetical protein;protein_id=HJH9173272.1;transl_table=11 DALFDA020000021.1 tpg gene 50046 51392 . - . ID=gene-O5C65_003201;Name=O5C65_003201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003201 DALFDA020000021.1 Protein Homology CDS 50046 51392 . - 0 ID=cds-HJH9173273.1;Parent=gene-O5C65_003201;Dbxref=NCBI_GP:HJH9173273.1;Name=HJH9173273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750514.1;locus_tag=O5C65_003201;product=STY4528 family pathogenicity island replication protein;protein_id=HJH9173273.1;transl_table=11 DALFDA020000021.1 tpg gene 51607 51861 . - . ID=gene-O5C65_003202;Name=O5C65_003202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003202 DALFDA020000021.1 Protein Homology CDS 51607 51861 . - 0 ID=cds-HJH9173274.1;Parent=gene-O5C65_003202;Dbxref=NCBI_GP:HJH9173274.1;Name=HJH9173274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750515.1;locus_tag=O5C65_003202;product=hypothetical protein;protein_id=HJH9173274.1;transl_table=11 DALFDA020000021.1 tpg gene 51858 52424 . - . ID=gene-O5C65_003203;Name=O5C65_003203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003203 DALFDA020000021.1 Protein Homology CDS 51858 52424 . - 0 ID=cds-HJH9173275.1;Parent=gene-O5C65_003203;Dbxref=NCBI_GP:HJH9173275.1;Name=HJH9173275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750516.1;locus_tag=O5C65_003203;product=DUF2857 domain-containing protein;protein_id=HJH9173275.1;transl_table=11 DALFDA020000021.1 tpg gene 52559 53086 . - . ID=gene-O5C65_003204;Name=O5C65_003204;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003204 DALFDA020000021.1 Protein Homology CDS 52559 53086 . - 0 ID=cds-HJH9173276.1;Parent=gene-O5C65_003204;Dbxref=NCBI_GP:HJH9173276.1;Name=HJH9173276.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048645.1;locus_tag=O5C65_003204;product=DUF7168 domain-containing protein;protein_id=HJH9173276.1;transl_table=11 DALFDA020000021.1 tpg gene 53083 53229 . - . ID=gene-O5C65_003205;Name=O5C65_003205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003205 DALFDA020000021.1 GeneMarkS-2+ CDS 53083 53229 . - 0 ID=cds-HJH9173277.1;Parent=gene-O5C65_003205;Dbxref=NCBI_GP:HJH9173277.1;Name=HJH9173277.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_003205;product=hypothetical protein;protein_id=HJH9173277.1;transl_table=11 DALFDA020000021.1 tpg gene 53226 55025 . - . ID=gene-O5C65_003206;Name=O5C65_003206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003206 DALFDA020000021.1 Protein Homology CDS 53226 55025 . - 0 ID=cds-HJH9173278.1;Parent=gene-O5C65_003206;Dbxref=NCBI_GP:HJH9173278.1;Name=HJH9173278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750518.1;locus_tag=O5C65_003206;product=ParB family protein;protein_id=HJH9173278.1;transl_table=11 DALFDA020000021.1 tpg gene 55191 56603 . - . ID=gene-O5C65_003207;Name=dnaB-PI;gbkey=Gene;gene=dnaB-PI;gene_biotype=protein_coding;locus_tag=O5C65_003207 DALFDA020000021.1 Protein Homology CDS 55191 56603 . - 0 ID=cds-HJH9173279.1;Parent=gene-O5C65_003207;Dbxref=NCBI_GP:HJH9173279.1;Name=HJH9173279.1;gbkey=CDS;gene=dnaB-PI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750519.1;locus_tag=O5C65_003207;product=SPI-7-type island replicative DNA helicase;protein_id=HJH9173279.1;transl_table=11 DALFDA020000021.1 tpg pseudogene 57042 57995 . - . ID=gene-O5C65_003208;Name=O5C65_003208;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_003208;pseudo=true DALFDA020000021.1 Protein Homology CDS 57042 57995 . - 0 ID=cds-O5C65_003208;Parent=gene-O5C65_003208;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009114273.1;locus_tag=O5C65_003208;product=ParA family protein;pseudo=true;transl_table=11 DALFDA020000021.1 tpg pseudogene 58297 58524 . + . ID=gene-O5C65_003209;Name=O5C65_003209;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_003209;pseudo=true DALFDA020000021.1 Protein Homology CDS 58297 58524 . + 0 ID=cds-O5C65_003209;Parent=gene-O5C65_003209;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005975783.1;locus_tag=O5C65_003209;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 DALFDA020000021.1 tpg gene 58798 59703 . - . ID=gene-O5C65_003210;Name=O5C65_003210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003210 DALFDA020000021.1 Protein Homology CDS 58798 59703 . - 0 ID=cds-HJH9173280.1;Parent=gene-O5C65_003210;Dbxref=NCBI_GP:HJH9173280.1;Name=HJH9173280.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441073.1;locus_tag=O5C65_003210;product=LysR family transcriptional regulator;protein_id=HJH9173280.1;transl_table=11 DALFDA020000021.1 tpg gene 59804 60427 . + . ID=gene-O5C65_003211;Name=O5C65_003211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003211 DALFDA020000021.1 Protein Homology CDS 59804 60427 . + 0 ID=cds-HJH9173281.1;Parent=gene-O5C65_003211;Dbxref=NCBI_GP:HJH9173281.1;Name=HJH9173281.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0016491,GO:0050136,GO:0050446;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,azobenzene reductase activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000697438.1;locus_tag=O5C65_003211;product=FMN-dependent NADH-azoreductase;protein_id=HJH9173281.1;transl_table=11 DALFDA020000021.1 tpg gene 60453 60716 . + . ID=gene-O5C65_003212;Name=O5C65_003212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003212 DALFDA020000021.1 Protein Homology CDS 60453 60716 . + 0 ID=cds-HJH9173282.1;Parent=gene-O5C65_003212;Dbxref=NCBI_GP:HJH9173282.1;Name=HJH9173282.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018986.6;locus_tag=O5C65_003212;product=YdgH/BhsA/McbA-like domain containing protein;protein_id=HJH9173282.1;transl_table=11 DALFDA020000021.1 tpg gene 60792 62111 . + . ID=gene-O5C65_003213;Name=O5C65_003213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003213 DALFDA020000021.1 Protein Homology CDS 60792 62111 . + 0 ID=cds-HJH9173283.1;Parent=gene-O5C65_003213;Dbxref=NCBI_GP:HJH9173283.1;Name=HJH9173283.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534139.1;locus_tag=O5C65_003213;product=ferredoxin reductase family protein;protein_id=HJH9173283.1;transl_table=11 DALFDA020000021.1 tpg gene 62385 62696 . - . ID=gene-O5C65_003214;Name=O5C65_003214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003214 DALFDA020000021.1 Protein Homology CDS 62385 62696 . - 0 ID=cds-HJH9173284.1;Parent=gene-O5C65_003214;Dbxref=NCBI_GP:HJH9173284.1;Name=HJH9173284.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019154.6;locus_tag=O5C65_003214;product=conjugal transfer nickase/helicase domain-containing protein;protein_id=HJH9173284.1;transl_table=11 DALFDA020000021.1 tpg gene 62686 63051 . - . ID=gene-O5C65_003215;Name=O5C65_003215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003215 DALFDA020000021.1 GeneMarkS-2+ CDS 62686 63051 . - 0 ID=cds-HJH9173285.1;Parent=gene-O5C65_003215;Dbxref=NCBI_GP:HJH9173285.1;Name=HJH9173285.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_003215;product=hypothetical protein;protein_id=HJH9173285.1;transl_table=11 DALFDA020000021.1 tpg gene 63143 63487 . + . ID=gene-O5C65_003216;Name=O5C65_003216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003216 DALFDA020000021.1 Protein Homology CDS 63143 63487 . + 0 ID=cds-HJH9173286.1;Parent=gene-O5C65_003216;Dbxref=NCBI_GP:HJH9173286.1;Name=HJH9173286.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: protein motif:HMM:NF014442.6;locus_tag=O5C65_003216;product=N-6 DNA methylase;protein_id=HJH9173286.1;transl_table=11 DALFDA020000021.1 tpg gene 63762 64904 . - . ID=gene-O5C65_003217;Name=O5C65_003217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003217 DALFDA020000021.1 Protein Homology CDS 63762 64904 . - 0 ID=cds-HJH9173287.1;Parent=gene-O5C65_003217;Dbxref=NCBI_GP:HJH9173287.1;Name=HJH9173287.1;Ontology_term=GO:0000287,GO:0005524,GO:0042803;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012822466.1;locus_tag=O5C65_003217;product=Fic family protein;protein_id=HJH9173287.1;transl_table=11 DALFDA020000021.1 tpg gene 65109 65441 . - . ID=gene-O5C65_003218;Name=O5C65_003218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003218 DALFDA020000021.1 Protein Homology CDS 65109 65441 . - 0 ID=cds-HJH9173288.1;Parent=gene-O5C65_003218;Dbxref=NCBI_GP:HJH9173288.1;Name=HJH9173288.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463185.1;locus_tag=O5C65_003218;product=MerR family transcriptional regulator;protein_id=HJH9173288.1;transl_table=11 DALFDA020000021.1 tpg gene 65513 65890 . + . ID=gene-O5C65_003219;Name=O5C65_003219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003219 DALFDA020000021.1 Protein Homology CDS 65513 65890 . + 0 ID=cds-HJH9173289.1;Parent=gene-O5C65_003219;Dbxref=NCBI_GP:HJH9173289.1;Name=HJH9173289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000916345.1;locus_tag=O5C65_003219;product=EthD domain-containing protein;protein_id=HJH9173289.1;transl_table=11 DALFDA020000021.1 tpg gene 66318 66698 . - . ID=gene-O5C65_003220;Name=O5C65_003220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003220 DALFDA020000021.1 Protein Homology CDS 66318 66698 . - 0 ID=cds-HJH9173290.1;Parent=gene-O5C65_003220;Dbxref=NCBI_GP:HJH9173290.1;Name=HJH9173290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582669.1;locus_tag=O5C65_003220;product=VOC family protein;protein_id=HJH9173290.1;transl_table=11 DALFDA020000021.1 tpg gene 66763 68088 . - . ID=gene-O5C65_003221;Name=ripA;gbkey=Gene;gene=ripA;gene_biotype=protein_coding;gene_synonym=ict;locus_tag=O5C65_003221 DALFDA020000021.1 Protein Homology CDS 66763 68088 . - 0 ID=cds-HJH9173291.1;Parent=gene-O5C65_003221;Dbxref=NCBI_GP:HJH9173291.1;Name=HJH9173291.1;Note=Transfers CoA from succinate to itaconate;gbkey=CDS;gene=ripA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462033.1;locus_tag=O5C65_003221;product=itaconate CoA-transferase RipA/Ict;protein_id=HJH9173291.1;transl_table=11 DALFDA020000021.1 tpg gene 68113 68640 . - . ID=gene-O5C65_003222;Name=ripB;gbkey=Gene;gene=ripB;gene_biotype=protein_coding;locus_tag=O5C65_003222 DALFDA020000021.1 Protein Homology CDS 68113 68640 . - 0 ID=cds-HJH9173292.1;Parent=gene-O5C65_003222;Dbxref=NCBI_GP:HJH9173292.1;Name=HJH9173292.1;Note=Second step in itaconate degradation.;gbkey=CDS;gene=ripB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462034.1;locus_tag=O5C65_003222;product=(R)-specific enoyl-CoA hydratase RipB/Ich;protein_id=HJH9173292.1;transl_table=11 DALFDA020000021.1 tpg gene 68664 69506 . - . ID=gene-O5C65_003223;Name=ripC;gbkey=Gene;gene=ripC;gene_biotype=protein_coding;locus_tag=O5C65_003223 DALFDA020000021.1 Protein Homology CDS 68664 69506 . - 0 ID=cds-HJH9173293.1;Parent=gene-O5C65_003223;Dbxref=NCBI_GP:HJH9173293.1;Name=HJH9173293.1;Note=Third step in itaconate degradation.;gbkey=CDS;gene=ripC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462035.1;locus_tag=O5C65_003223;product=itaconate degradation C-C-lyase RipC;protein_id=HJH9173293.1;transl_table=11 DALFDA020000021.1 tpg gene 69598 70476 . + . ID=gene-O5C65_003224;Name=ripR;gbkey=Gene;gene=ripR;gene_biotype=protein_coding;locus_tag=O5C65_003224 DALFDA020000021.1 Protein Homology CDS 69598 70476 . + 0 ID=cds-HJH9173294.1;Parent=gene-O5C65_003224;Dbxref=NCBI_GP:HJH9173294.1;Name=HJH9173294.1;gbkey=CDS;gene=ripR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462036.1;locus_tag=O5C65_003224;product=itaconate degradation transcriptional regulator RipR;protein_id=HJH9173294.1;transl_table=11 DALFDA020000021.1 tpg gene 70524 72263 . - . ID=gene-O5C65_003225;Name=O5C65_003225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003225 DALFDA020000021.1 Protein Homology CDS 70524 72263 . - 0 ID=cds-HJH9173295.1;Parent=gene-O5C65_003225;Dbxref=NCBI_GP:HJH9173295.1;Name=HJH9173295.1;Ontology_term=GO:0004065,GO:0008081,GO:0046872;gbkey=CDS;go_function=arylsulfatase activity|0004065||IEA,phosphoric diester hydrolase activity|0008081||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462037.1;locus_tag=O5C65_003225;product=arylsulfatase;protein_id=HJH9173295.1;transl_table=11 DALFDA020000021.1 tpg gene 72332 73516 . - . ID=gene-O5C65_003226;Name=O5C65_003226;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003226 DALFDA020000021.1 Protein Homology CDS 72332 73516 . - 0 ID=cds-HJH9173296.1;Parent=gene-O5C65_003226;Dbxref=NCBI_GP:HJH9173296.1;Name=HJH9173296.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462038.1;locus_tag=O5C65_003226;product=anaerobic sulfatase maturase;protein_id=HJH9173296.1;transl_table=11 DALFDA020000021.1 tpg gene 74028 74711 . + . ID=gene-O5C65_003227;Name=O5C65_003227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003227 DALFDA020000021.1 Protein Homology CDS 74028 74711 . + 0 ID=cds-HJH9173297.1;Parent=gene-O5C65_003227;Dbxref=NCBI_GP:HJH9173297.1;Name=HJH9173297.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462039.1;locus_tag=O5C65_003227;product=response regulator transcription factor;protein_id=HJH9173297.1;transl_table=11 DALFDA020000021.1 tpg gene 74816 75373 . - . ID=gene-O5C65_003228;Name=O5C65_003228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003228 DALFDA020000021.1 Protein Homology CDS 74816 75373 . - 0 ID=cds-HJH9173298.1;Parent=gene-O5C65_003228;Dbxref=NCBI_GP:HJH9173298.1;Name=HJH9173298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462040.1;locus_tag=O5C65_003228;product=DUF3156 family protein;protein_id=HJH9173298.1;transl_table=11 DALFDA020000021.1 tpg gene 75351 76850 . - . ID=gene-O5C65_003229;Name=O5C65_003229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003229 DALFDA020000021.1 Protein Homology CDS 75351 76850 . - 0 ID=cds-HJH9173299.1;Parent=gene-O5C65_003229;Dbxref=NCBI_GP:HJH9173299.1;Name=HJH9173299.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462041.1;locus_tag=O5C65_003229;product=APC family permease;protein_id=HJH9173299.1;transl_table=11 DALFDA020000021.1 tpg gene 77059 77433 . - . ID=gene-O5C65_003230;Name=O5C65_003230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003230 DALFDA020000021.1 Protein Homology CDS 77059 77433 . - 0 ID=cds-HJH9173300.1;Parent=gene-O5C65_003230;Dbxref=NCBI_GP:HJH9173300.1;Name=HJH9173300.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462042.1;locus_tag=O5C65_003230;product=cupin domain-containing protein;protein_id=HJH9173300.1;transl_table=11 DALFDA020000021.1 tpg gene 77448 78749 . - . ID=gene-O5C65_003231;Name=O5C65_003231;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003231 DALFDA020000021.1 Protein Homology CDS 77448 78749 . - 0 ID=cds-HJH9173301.1;Parent=gene-O5C65_003231;Dbxref=NCBI_GP:HJH9173301.1;Name=HJH9173301.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462043.1;locus_tag=O5C65_003231;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=HJH9173301.1;transl_table=11 DALFDA020000021.1 tpg gene 78911 80395 . + . ID=gene-O5C65_003232;Name=O5C65_003232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003232 DALFDA020000021.1 Protein Homology CDS 78911 80395 . + 0 ID=cds-HJH9173302.1;Parent=gene-O5C65_003232;Dbxref=NCBI_GP:HJH9173302.1;Name=HJH9173302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462044.1;locus_tag=O5C65_003232;product=NAD-dependent phenylacetaldehyde dehydrogenase;protein_id=HJH9173302.1;transl_table=11 DALFDA020000021.1 tpg gene 80531 80911 . - . ID=gene-O5C65_003233;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=O5C65_003233 DALFDA020000021.1 Protein Homology CDS 80531 80911 . - 0 ID=cds-HJH9173303.1;Parent=gene-O5C65_003233;Dbxref=NCBI_GP:HJH9173303.1;Name=HJH9173303.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462045.1;locus_tag=O5C65_003233;product=anti-adapter protein IraD;protein_id=HJH9173303.1;transl_table=11 DALFDA020000021.1 tpg gene 80911 81396 . - . ID=gene-O5C65_003234;Name=O5C65_003234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003234 DALFDA020000021.1 Protein Homology CDS 80911 81396 . - 0 ID=cds-HJH9173304.1;Parent=gene-O5C65_003234;Dbxref=NCBI_GP:HJH9173304.1;Name=HJH9173304.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462046.1;locus_tag=O5C65_003234;product=Hcp family type VI secretion system effector;protein_id=HJH9173304.1;transl_table=11 DALFDA020000021.1 tpg gene 82122 83045 . - . ID=gene-O5C65_003235;Name=O5C65_003235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003235 DALFDA020000021.1 Protein Homology CDS 82122 83045 . - 0 ID=cds-HJH9173305.1;Parent=gene-O5C65_003235;Dbxref=NCBI_GP:HJH9173305.1;Name=HJH9173305.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462047.1;locus_tag=O5C65_003235;product=polysaccharide deacetylase family protein;protein_id=HJH9173305.1;transl_table=11 DALFDA020000021.1 tpg gene 83084 83962 . - . ID=gene-O5C65_003236;Name=O5C65_003236;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003236 DALFDA020000021.1 Protein Homology CDS 83084 83962 . - 0 ID=cds-HJH9173306.1;Parent=gene-O5C65_003236;Dbxref=NCBI_GP:HJH9173306.1;Name=HJH9173306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462048.1;locus_tag=O5C65_003236;product=carbon-nitrogen hydrolase family protein;protein_id=HJH9173306.1;transl_table=11 DALFDA020000021.1 tpg gene 84358 85662 . - . ID=gene-O5C65_003237;Name=O5C65_003237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003237 DALFDA020000021.1 Protein Homology CDS 84358 85662 . - 0 ID=cds-HJH9173307.1;Parent=gene-O5C65_003237;Dbxref=NCBI_GP:HJH9173307.1;Name=HJH9173307.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462049.1;locus_tag=O5C65_003237;product=MFS transporter;protein_id=HJH9173307.1;transl_table=11 DALFDA020000021.1 tpg gene 86066 87250 . + . ID=gene-O5C65_003238;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=O5C65_003238 DALFDA020000021.1 Protein Homology CDS 86066 87250 . + 0 ID=cds-HJH9173308.1;Parent=gene-O5C65_003238;Dbxref=NCBI_GP:HJH9173308.1;Name=HJH9173308.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462050.1;locus_tag=O5C65_003238;product=mannonate dehydratase;protein_id=HJH9173308.1;transl_table=11 DALFDA020000021.1 tpg gene 87361 88833 . + . ID=gene-O5C65_003239;Name=O5C65_003239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003239 DALFDA020000021.1 Protein Homology CDS 87361 88833 . + 0 ID=cds-HJH9173309.1;Parent=gene-O5C65_003239;Dbxref=NCBI_GP:HJH9173309.1;Name=HJH9173309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462051.1;locus_tag=O5C65_003239;product=fructuronate reductase;protein_id=HJH9173309.1;transl_table=11 DALFDA020000021.1 tpg gene 88845 90257 . + . ID=gene-O5C65_003240;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=O5C65_003240 DALFDA020000021.1 Protein Homology CDS 88845 90257 . + 0 ID=cds-HJH9173310.1;Parent=gene-O5C65_003240;Dbxref=NCBI_GP:HJH9173310.1;Name=HJH9173310.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462052.1;locus_tag=O5C65_003240;product=glucuronate isomerase;protein_id=HJH9173310.1;transl_table=11 DALFDA020000021.1 tpg gene 90557 91615 . - . ID=gene-O5C65_003241;Name=O5C65_003241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003241 DALFDA020000021.1 Protein Homology CDS 90557 91615 . - 0 ID=cds-HJH9173311.1;Parent=gene-O5C65_003241;Dbxref=NCBI_GP:HJH9173311.1;Name=HJH9173311.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA,zinc ion binding|0008270||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462053.1;locus_tag=O5C65_003241;product=methyl-accepting chemotaxis protein;protein_id=HJH9173311.1;transl_table=11 DALFDA020000021.1 tpg gene 92285 94141 . - . ID=gene-O5C65_003242;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=O5C65_003242 DALFDA020000021.1 Protein Homology CDS 92285 94141 . - 0 ID=cds-HJH9173312.1;Parent=gene-O5C65_003242;Dbxref=NCBI_GP:HJH9173312.1;Name=HJH9173312.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462054.1;locus_tag=O5C65_003242;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=HJH9173312.1;transl_table=11 DALFDA020000021.1 tpg gene 94368 95234 . + . ID=gene-O5C65_003243;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=O5C65_003243 DALFDA020000021.1 Protein Homology CDS 94368 95234 . + 0 ID=cds-HJH9173313.1;Parent=gene-O5C65_003243;Dbxref=NCBI_GP:HJH9173313.1;Name=HJH9173313.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462055.1;locus_tag=O5C65_003243;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=HJH9173313.1;transl_table=11 DALFDA020000021.1 tpg gene 95302 96012 . - . ID=gene-O5C65_003244;Name=O5C65_003244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003244 DALFDA020000021.1 Protein Homology CDS 95302 96012 . - 0 ID=cds-HJH9173314.1;Parent=gene-O5C65_003244;Dbxref=NCBI_GP:HJH9173314.1;Name=HJH9173314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462056.1;locus_tag=O5C65_003244;product=molybdate ABC transporter substrate-binding protein;protein_id=HJH9173314.1;transl_table=11 DALFDA020000021.1 tpg gene 96012 97064 . - . ID=gene-O5C65_003245;Name=O5C65_003245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003245 DALFDA020000021.1 Protein Homology CDS 96012 97064 . - 0 ID=cds-HJH9173315.1;Parent=gene-O5C65_003245;Dbxref=NCBI_GP:HJH9173315.1;Name=HJH9173315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462057.1;locus_tag=O5C65_003245;product=ABC transporter substrate-binding protein;protein_id=HJH9173315.1;transl_table=11 DALFDA020000021.1 tpg gene 97140 97388 . - . ID=gene-O5C65_003246;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=O5C65_003246 DALFDA020000021.1 Protein Homology CDS 97140 97388 . - 0 ID=cds-HJH9173316.1;Parent=gene-O5C65_003246;Dbxref=NCBI_GP:HJH9173316.1;Name=HJH9173316.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462058.1;locus_tag=O5C65_003246;product=hydrogenase maturation factor HybG;protein_id=HJH9173316.1;transl_table=11 DALFDA020000021.1 tpg gene 97416 97757 . - . ID=gene-O5C65_003247;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=O5C65_003247 DALFDA020000021.1 Protein Homology CDS 97416 97757 . - 0 ID=cds-HJH9173317.1;Parent=gene-O5C65_003247;Dbxref=NCBI_GP:HJH9173317.1;Name=HJH9173317.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462059.1;locus_tag=O5C65_003247;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=HJH9173317.1;transl_table=11 DALFDA020000021.1 tpg gene 97750 98238 . - . ID=gene-O5C65_003248;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=O5C65_003248 DALFDA020000021.1 Protein Homology CDS 97750 98238 . - 0 ID=cds-HJH9173318.1;Parent=gene-O5C65_003248;Dbxref=NCBI_GP:HJH9173318.1;Name=HJH9173318.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462060.1;locus_tag=O5C65_003248;product=hydrogenase-2 assembly chaperone;protein_id=HJH9173318.1;transl_table=11 DALFDA020000021.1 tpg gene 98231 98725 . - . ID=gene-O5C65_003249;Name=O5C65_003249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003249 DALFDA020000021.1 Protein Homology CDS 98231 98725 . - 0 ID=cds-HJH9173319.1;Parent=gene-O5C65_003249;Dbxref=NCBI_GP:HJH9173319.1;Name=HJH9173319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462061.1;locus_tag=O5C65_003249;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=HJH9173319.1;transl_table=11 DALFDA020000021.1 tpg gene 98725 100428 . - . ID=gene-O5C65_003250;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=O5C65_003250 DALFDA020000021.1 Protein Homology CDS 98725 100428 . - 0 ID=cds-HJH9173320.1;Parent=gene-O5C65_003250;Dbxref=NCBI_GP:HJH9173320.1;Name=HJH9173320.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462062.1;locus_tag=O5C65_003250;product=hydrogenase 2 large subunit;protein_id=HJH9173320.1;transl_table=11 DALFDA020000021.1 tpg gene 100425 101603 . - . ID=gene-O5C65_003251;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=O5C65_003251 DALFDA020000021.1 Protein Homology CDS 100425 101603 . - 0 ID=cds-HJH9173321.1;Parent=gene-O5C65_003251;Dbxref=NCBI_GP:HJH9173321.1;Name=HJH9173321.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462063.1;locus_tag=O5C65_003251;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=HJH9173321.1;transl_table=11 DALFDA020000021.1 tpg gene 101593 102579 . - . ID=gene-O5C65_003252;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=O5C65_003252 DALFDA020000021.1 Protein Homology CDS 101593 102579 . - 0 ID=cds-HJH9173322.1;Parent=gene-O5C65_003252;Dbxref=NCBI_GP:HJH9173322.1;Name=HJH9173322.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462064.1;locus_tag=O5C65_003252;product=hydrogenase 2 operon protein HybA;protein_id=HJH9173322.1;transl_table=11 DALFDA020000021.1 tpg gene 102582 103700 . - . ID=gene-O5C65_003253;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=O5C65_003253 DALFDA020000021.1 Protein Homology CDS 102582 103700 . - 0 ID=cds-HJH9173323.1;Parent=gene-O5C65_003253;Dbxref=NCBI_GP:HJH9173323.1;Name=HJH9173323.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462065.1;locus_tag=O5C65_003253;product=hydrogenase 2 small subunit;protein_id=HJH9173323.1;transl_table=11 DALFDA020000021.1 tpg gene 103890 104177 . - . ID=gene-O5C65_003254;Name=O5C65_003254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003254 DALFDA020000021.1 Protein Homology CDS 103890 104177 . - 0 ID=cds-HJH9173324.1;Parent=gene-O5C65_003254;Dbxref=NCBI_GP:HJH9173324.1;Name=HJH9173324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462066.1;locus_tag=O5C65_003254;product=DUF2623 family protein;protein_id=HJH9173324.1;transl_table=11 DALFDA020000021.1 tpg gene 104262 105905 . - . ID=gene-O5C65_003255;Name=O5C65_003255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003255 DALFDA020000021.1 Protein Homology CDS 104262 105905 . - 0 ID=cds-HJH9173325.1;Parent=gene-O5C65_003255;Dbxref=NCBI_GP:HJH9173325.1;Name=HJH9173325.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462067.1;locus_tag=O5C65_003255;product=methyl-accepting chemotaxis protein;protein_id=HJH9173325.1;transl_table=11 DALFDA020000021.1 tpg gene 106212 106706 . - . ID=gene-O5C65_003256;Name=O5C65_003256;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003256 DALFDA020000021.1 Protein Homology CDS 106212 106706 . - 0 ID=cds-HJH9173326.1;Parent=gene-O5C65_003256;Dbxref=NCBI_GP:HJH9173326.1;Name=HJH9173326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462068.1;locus_tag=O5C65_003256;product=TIGR00645 family protein;protein_id=HJH9173326.1;transl_table=11 ##sequence-region DALFDA020000022.1 1 106093 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000022.1 tpg region 1 106093 . + . ID=DALFDA020000022.1:1..106093;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000022.1 tpg gene 1 96 . - . ID=gene-O5C65_003257;Name=O5C65_003257;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003257;partial=true;start_range=.,1 DALFDA020000022.1 Protein Homology CDS 1 96 . - 0 ID=cds-HJH9173327.1;Parent=gene-O5C65_003257;Dbxref=NCBI_GP:HJH9173327.1;Name=HJH9173327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460123.1;locus_tag=O5C65_003257;partial=true;product=YceK/YidQ family lipoprotein;protein_id=HJH9173327.1;start_range=.,1;transl_table=11 DALFDA020000022.1 tpg gene 162 2705 . - . ID=gene-O5C65_003258;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=O5C65_003258 DALFDA020000022.1 Protein Homology CDS 162 2705 . - 0 ID=cds-HJH9173328.1;Parent=gene-O5C65_003258;Dbxref=NCBI_GP:HJH9173328.1;Name=HJH9173328.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044602.1;locus_tag=O5C65_003258;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=HJH9173328.1;transl_table=11 DALFDA020000022.1 tpg gene 2698 4233 . - . ID=gene-O5C65_003259;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=O5C65_003259 DALFDA020000022.1 Protein Homology CDS 2698 4233 . - 0 ID=cds-HJH9173329.1;Parent=gene-O5C65_003259;Dbxref=NCBI_GP:HJH9173329.1;Name=HJH9173329.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460121.1;locus_tag=O5C65_003259;product=glucans biosynthesis protein MdoG;protein_id=HJH9173329.1;transl_table=11 DALFDA020000022.1 tpg gene 4505 5659 . + . ID=gene-O5C65_003260;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=O5C65_003260 DALFDA020000022.1 Protein Homology CDS 4505 5659 . + 0 ID=cds-HJH9173330.1;Parent=gene-O5C65_003260;Dbxref=NCBI_GP:HJH9173330.1;Name=HJH9173330.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460120.1;locus_tag=O5C65_003260;product=glucans biosynthesis protein MdoC;protein_id=HJH9173330.1;transl_table=11 DALFDA020000022.1 tpg gene 5676 7163 . - . ID=gene-O5C65_003261;Name=O5C65_003261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003261 DALFDA020000022.1 Protein Homology CDS 5676 7163 . - 0 ID=cds-HJH9173331.1;Parent=gene-O5C65_003261;Dbxref=NCBI_GP:HJH9173331.1;Name=HJH9173331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=O5C65_003261;product=phospholipase D family protein;protein_id=HJH9173331.1;transl_table=11 DALFDA020000022.1 tpg gene 7099 7638 . - . ID=gene-O5C65_003262;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=O5C65_003262 DALFDA020000022.1 Protein Homology CDS 7099 7638 . - 0 ID=cds-HJH9173332.1;Parent=gene-O5C65_003262;Dbxref=NCBI_GP:HJH9173332.1;Name=HJH9173332.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460118.1;locus_tag=O5C65_003262;product=O-acetyl-ADP-ribose deacetylase;protein_id=HJH9173332.1;transl_table=11 DALFDA020000022.1 tpg gene 7724 8044 . - . ID=gene-O5C65_003263;Name=O5C65_003263;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003263 DALFDA020000022.1 Protein Homology CDS 7724 8044 . - 0 ID=cds-HJH9173333.1;Parent=gene-O5C65_003263;Dbxref=NCBI_GP:HJH9173333.1;Name=HJH9173333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460117.1;locus_tag=O5C65_003263;product=type 1 fimbrial protein;protein_id=HJH9173333.1;transl_table=11 DALFDA020000022.1 tpg gene 8175 8501 . - . ID=gene-O5C65_003264;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=O5C65_003264 DALFDA020000022.1 Protein Homology CDS 8175 8501 . - 0 ID=cds-HJH9173334.1;Parent=gene-O5C65_003264;Dbxref=NCBI_GP:HJH9173334.1;Name=HJH9173334.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460116.1;locus_tag=O5C65_003264;product=curli assembly chaperone CsgC;protein_id=HJH9173334.1;transl_table=11 DALFDA020000022.1 tpg gene 8563 9018 . - . ID=gene-O5C65_003265;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=O5C65_003265 DALFDA020000022.1 Protein Homology CDS 8563 9018 . - 0 ID=cds-HJH9173335.1;Parent=gene-O5C65_003265;Dbxref=NCBI_GP:HJH9173335.1;Name=HJH9173335.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460115.1;locus_tag=O5C65_003265;product=curli major subunit CsgA;protein_id=HJH9173335.1;transl_table=11 DALFDA020000022.1 tpg gene 9060 9515 . - . ID=gene-O5C65_003266;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=O5C65_003266 DALFDA020000022.1 Protein Homology CDS 9060 9515 . - 0 ID=cds-HJH9173336.1;Parent=gene-O5C65_003266;Dbxref=NCBI_GP:HJH9173336.1;Name=HJH9173336.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460114.1;locus_tag=O5C65_003266;product=curli minor subunit CsgB;protein_id=HJH9173336.1;transl_table=11 DALFDA020000022.1 tpg gene 10270 10920 . + . ID=gene-O5C65_003267;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=O5C65_003267 DALFDA020000022.1 Protein Homology CDS 10270 10920 . + 0 ID=cds-HJH9173337.1;Parent=gene-O5C65_003267;Dbxref=NCBI_GP:HJH9173337.1;Name=HJH9173337.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460113.1;locus_tag=O5C65_003267;product=biofilm master transcriptional regulator CsgD;protein_id=HJH9173337.1;transl_table=11 DALFDA020000022.1 tpg gene 10925 11320 . + . ID=gene-O5C65_003268;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=O5C65_003268 DALFDA020000022.1 Protein Homology CDS 10925 11320 . + 0 ID=cds-HJH9173338.1;Parent=gene-O5C65_003268;Dbxref=NCBI_GP:HJH9173338.1;Name=HJH9173338.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460112.1;locus_tag=O5C65_003268;product=curli production assembly/transport protein CsgE;protein_id=HJH9173338.1;transl_table=11 DALFDA020000022.1 tpg gene 11347 11763 . + . ID=gene-O5C65_003269;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=O5C65_003269 DALFDA020000022.1 Protein Homology CDS 11347 11763 . + 0 ID=cds-HJH9173339.1;Parent=gene-O5C65_003269;Dbxref=NCBI_GP:HJH9173339.1;Name=HJH9173339.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460111.1;locus_tag=O5C65_003269;product=curli production assembly/transport protein CsgF;protein_id=HJH9173339.1;transl_table=11 DALFDA020000022.1 tpg gene 11790 12623 . + . ID=gene-O5C65_003270;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=O5C65_003270 DALFDA020000022.1 Protein Homology CDS 11790 12623 . + 0 ID=cds-HJH9173340.1;Parent=gene-O5C65_003270;Dbxref=NCBI_GP:HJH9173340.1;Name=HJH9173340.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460110.1;locus_tag=O5C65_003270;product=curli production assembly/transport protein CsgG;protein_id=HJH9173340.1;transl_table=11 DALFDA020000022.1 tpg gene 12662 13144 . - . ID=gene-O5C65_003271;Name=O5C65_003271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003271 DALFDA020000022.1 Protein Homology CDS 12662 13144 . - 0 ID=cds-HJH9173341.1;Parent=gene-O5C65_003271;Dbxref=NCBI_GP:HJH9173341.1;Name=HJH9173341.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675581.1;locus_tag=O5C65_003271;product=DUF1097 domain-containing protein;protein_id=HJH9173341.1;transl_table=11 DALFDA020000022.1 tpg gene 13245 13799 . - . ID=gene-O5C65_003272;Name=O5C65_003272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003272 DALFDA020000022.1 Protein Homology CDS 13245 13799 . - 0 ID=cds-HJH9173342.1;Parent=gene-O5C65_003272;Dbxref=NCBI_GP:HJH9173342.1;Name=HJH9173342.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460108.1;locus_tag=O5C65_003272;product=TorD/DmsD family molecular chaperone;protein_id=HJH9173342.1;transl_table=11 DALFDA020000022.1 tpg gene 13823 14560 . - . ID=gene-O5C65_003273;Name=O5C65_003273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003273 DALFDA020000022.1 Protein Homology CDS 13823 14560 . - 0 ID=cds-HJH9173343.1;Parent=gene-O5C65_003273;Dbxref=NCBI_GP:HJH9173343.1;Name=HJH9173343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460107.1;locus_tag=O5C65_003273;product=phosphatase;protein_id=HJH9173343.1;transl_table=11 DALFDA020000022.1 tpg gene 14645 15583 . - . ID=gene-O5C65_003274;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=O5C65_003274 DALFDA020000022.1 Protein Homology CDS 14645 15583 . - 0 ID=cds-HJH9173344.1;Parent=gene-O5C65_003274;Dbxref=NCBI_GP:HJH9173344.1;Name=HJH9173344.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase [NAD(P)H] activity|0016618||IEA,glyoxylate reductase (NADPH) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460106.1;locus_tag=O5C65_003274;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=HJH9173344.1;transl_table=11 DALFDA020000022.1 tpg gene 15819 15906 . + . ID=gene-O5C65_003275;Name=O5C65_003275;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_003275 DALFDA020000022.1 tRNAscan-SE tRNA 15819 15906 . + . ID=rna-O5C65_003275;Parent=gene-O5C65_003275;anticodon=(pos:15853..15855);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003275;product=tRNA-Ser DALFDA020000022.1 tRNAscan-SE exon 15819 15906 . + . ID=exon-O5C65_003275-1;Parent=rna-O5C65_003275;anticodon=(pos:15853..15855);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003275;product=tRNA-Ser DALFDA020000022.1 tpg gene 15955 16090 . + . ID=gene-O5C65_003276;Name=O5C65_003276;gbkey=Gene;gene_biotype=ncRNA;locus_tag=O5C65_003276 DALFDA020000022.1 cmsearch ncRNA 15955 16090 . + . ID=rna-O5C65_003276;Parent=gene-O5C65_003276;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_003276;product=RtT sRNA DALFDA020000022.1 cmsearch exon 15955 16090 . + . ID=exon-O5C65_003276-1;Parent=rna-O5C65_003276;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_003276;product=RtT sRNA DALFDA020000022.1 tpg pseudogene 17037 17153 . + . ID=gene-O5C65_003277;Name=O5C65_003277;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_003277;pseudo=true DALFDA020000022.1 Protein Homology CDS 17037 17153 . + 0 ID=cds-O5C65_003277;Parent=gene-O5C65_003277;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611504.1;locus_tag=O5C65_003277;product=transposase;pseudo=true;transl_table=11 DALFDA020000022.1 tpg gene 17379 18398 . - . ID=gene-O5C65_003278;Name=O5C65_003278;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003278 DALFDA020000022.1 Protein Homology CDS 17379 18398 . - 0 ID=cds-HJH9173345.1;Parent=gene-O5C65_003278;Dbxref=NCBI_GP:HJH9173345.1;Name=HJH9173345.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032444102.1;locus_tag=O5C65_003278;product=IS110-like element ISSaen1 family transposase;protein_id=HJH9173345.1;transl_table=11 DALFDA020000022.1 tpg pseudogene 18468 18599 . + . ID=gene-O5C65_003279;Name=O5C65_003279;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_003279;pseudo=true DALFDA020000022.1 Protein Homology CDS 18468 18599 . + 0 ID=cds-O5C65_003279;Parent=gene-O5C65_003279;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611496.1;locus_tag=O5C65_003279;product=transposase;pseudo=true;transl_table=11 DALFDA020000022.1 tpg gene 18860 19678 . - . ID=gene-O5C65_003280;Name=O5C65_003280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003280 DALFDA020000022.1 Protein Homology CDS 18860 19678 . - 0 ID=cds-HJH9173346.1;Parent=gene-O5C65_003280;Dbxref=NCBI_GP:HJH9173346.1;Name=HJH9173346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176774.1;locus_tag=O5C65_003280;product=hypothetical protein;protein_id=HJH9173346.1;transl_table=11 DALFDA020000022.1 tpg pseudogene 20152 20397 . - . ID=gene-O5C65_003281;Name=O5C65_003281;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_003281;pseudo=true DALFDA020000022.1 Protein Homology CDS 20152 20397 . - 0 ID=cds-O5C65_003281;Parent=gene-O5C65_003281;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524936.1;locus_tag=O5C65_003281;product=hypothetical protein;pseudo=true;transl_table=11 DALFDA020000022.1 tpg gene 20688 20777 . - . ID=gene-O5C65_003282;Name=O5C65_003282;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_003282 DALFDA020000022.1 tRNAscan-SE tRNA 20688 20777 . - . ID=rna-O5C65_003282;Parent=gene-O5C65_003282;anticodon=(pos:complement(20741..20743));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003282;product=tRNA-Ser DALFDA020000022.1 tRNAscan-SE exon 20688 20777 . - . ID=exon-O5C65_003282-1;Parent=rna-O5C65_003282;anticodon=(pos:complement(20741..20743));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003282;product=tRNA-Ser DALFDA020000022.1 tpg gene 20866 21663 . + . ID=gene-O5C65_003283;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=O5C65_003283 DALFDA020000022.1 Protein Homology CDS 20866 21663 . + 0 ID=cds-HJH9173347.1;Parent=gene-O5C65_003283;Dbxref=NCBI_GP:HJH9173347.1;Name=HJH9173347.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460951.1;locus_tag=O5C65_003283;product=DgsA anti-repressor MtfA;protein_id=HJH9173347.1;transl_table=11 DALFDA020000022.1 tpg gene 21764 21839 . + . ID=gene-O5C65_003284;Name=O5C65_003284;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_003284 DALFDA020000022.1 tRNAscan-SE tRNA 21764 21839 . + . ID=rna-O5C65_003284;Parent=gene-O5C65_003284;anticodon=(pos:21797..21799);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003284;product=tRNA-Asn DALFDA020000022.1 tRNAscan-SE exon 21764 21839 . + . ID=exon-O5C65_003284-1;Parent=rna-O5C65_003284;anticodon=(pos:21797..21799);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003284;product=tRNA-Asn DALFDA020000022.1 tpg pseudogene 22007 22312 . + . ID=gene-O5C65_003285;Name=O5C65_003285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_003285;pseudo=true DALFDA020000022.1 Protein Homology CDS 22007 22312 . + 0 ID=cds-O5C65_003285;Parent=gene-O5C65_003285;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751368.1;locus_tag=O5C65_003285;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 DALFDA020000022.1 tpg gene 22734 22809 . + . ID=gene-O5C65_003286;Name=O5C65_003286;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_003286 DALFDA020000022.1 tRNAscan-SE tRNA 22734 22809 . + . ID=rna-O5C65_003286;Parent=gene-O5C65_003286;anticodon=(pos:22767..22769);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003286;product=tRNA-Asn DALFDA020000022.1 tRNAscan-SE exon 22734 22809 . + . ID=exon-O5C65_003286-1;Parent=rna-O5C65_003286;anticodon=(pos:22767..22769);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003286;product=tRNA-Asn DALFDA020000022.1 tpg gene 22974 23255 . + . ID=gene-O5C65_003287;Name=O5C65_003287;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003287 DALFDA020000022.1 Protein Homology CDS 22974 23255 . + 0 ID=cds-HJH9173348.1;Parent=gene-O5C65_003287;Dbxref=NCBI_GP:HJH9173348.1;Name=HJH9173348.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835997.1;locus_tag=O5C65_003287;product=Arm DNA-binding domain-containing protein;protein_id=HJH9173348.1;transl_table=11 DALFDA020000022.1 tpg gene 23573 23914 . - . ID=gene-O5C65_003288;Name=O5C65_003288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003288 DALFDA020000022.1 Protein Homology CDS 23573 23914 . - 0 ID=cds-HJH9173349.1;Parent=gene-O5C65_003288;Dbxref=NCBI_GP:HJH9173349.1;Name=HJH9173349.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000967787.1;locus_tag=O5C65_003288;product=winged helix-turn-helix transcriptional regulator;protein_id=HJH9173349.1;transl_table=11 DALFDA020000022.1 tpg gene 24029 24586 . + . ID=gene-O5C65_003289;Name=O5C65_003289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003289 DALFDA020000022.1 Protein Homology CDS 24029 24586 . + 0 ID=cds-HJH9173350.1;Parent=gene-O5C65_003289;Dbxref=NCBI_GP:HJH9173350.1;Name=HJH9173350.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000751883.1;locus_tag=O5C65_003289;product=NAD(P)H-dependent oxidoreductase;protein_id=HJH9173350.1;transl_table=11 DALFDA020000022.1 tpg pseudogene 25152 25250 . + . ID=gene-O5C65_003290;Name=O5C65_003290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_003290;pseudo=true DALFDA020000022.1 Protein Homology CDS 25152 25250 . + 0 ID=cds-O5C65_003290;Parent=gene-O5C65_003290;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000059623.1;locus_tag=O5C65_003290;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 DALFDA020000022.1 tpg gene 25493 26947 . - . ID=gene-O5C65_003291;Name=O5C65_003291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003291 DALFDA020000022.1 Protein Homology CDS 25493 26947 . - 0 ID=cds-HJH9173351.1;Parent=gene-O5C65_003291;Dbxref=NCBI_GP:HJH9173351.1;Name=HJH9173351.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460956.1;locus_tag=O5C65_003291;product=AMP nucleosidase;protein_id=HJH9173351.1;transl_table=11 DALFDA020000022.1 tpg pseudogene 26993 27154 . + . ID=gene-O5C65_003292;Name=O5C65_003292;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_003292;pseudo=true DALFDA020000022.1 Protein Homology CDS 26993 27154 . + 0 ID=cds-O5C65_003292;Parent=gene-O5C65_003292;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448416.1;locus_tag=O5C65_003292;product=cytoplasmic protein;pseudo=true;transl_table=11 DALFDA020000022.1 tpg gene 27143 27469 . - . ID=gene-O5C65_003293;Name=O5C65_003293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003293 DALFDA020000022.1 Protein Homology CDS 27143 27469 . - 0 ID=cds-HJH9173352.1;Parent=gene-O5C65_003293;Dbxref=NCBI_GP:HJH9173352.1;Name=HJH9173352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460958.1;locus_tag=O5C65_003293;product=DUF1493 family protein;protein_id=HJH9173352.1;transl_table=11 DALFDA020000022.1 tpg gene 27463 27927 . - . ID=gene-O5C65_003294;Name=O5C65_003294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003294 DALFDA020000022.1 Protein Homology CDS 27463 27927 . - 0 ID=cds-HJH9173353.1;Parent=gene-O5C65_003294;Dbxref=NCBI_GP:HJH9173353.1;Name=HJH9173353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211098.1;locus_tag=O5C65_003294;product=STM2901 family protein;protein_id=HJH9173353.1;transl_table=11 DALFDA020000022.1 tpg gene 28348 28423 . - . ID=gene-O5C65_003295;Name=O5C65_003295;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_003295 DALFDA020000022.1 tRNAscan-SE tRNA 28348 28423 . - . ID=rna-O5C65_003295;Parent=gene-O5C65_003295;anticodon=(pos:complement(28388..28390));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003295;product=tRNA-Asn DALFDA020000022.1 tRNAscan-SE exon 28348 28423 . - . ID=exon-O5C65_003295-1;Parent=rna-O5C65_003295;anticodon=(pos:complement(28388..28390));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003295;product=tRNA-Asn DALFDA020000022.1 tpg gene 28564 30021 . - . ID=gene-O5C65_003296;Name=O5C65_003296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003296 DALFDA020000022.1 Protein Homology CDS 28564 30021 . - 0 ID=cds-HJH9173354.1;Parent=gene-O5C65_003296;Dbxref=NCBI_GP:HJH9173354.1;Name=HJH9173354.1;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460959.1;locus_tag=O5C65_003296;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=HJH9173354.1;transl_table=11 DALFDA020000022.1 tpg gene 30181 30256 . + . ID=gene-O5C65_003297;Name=O5C65_003297;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_003297 DALFDA020000022.1 tRNAscan-SE tRNA 30181 30256 . + . ID=rna-O5C65_003297;Parent=gene-O5C65_003297;anticodon=(pos:30214..30216);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003297;product=tRNA-Asn DALFDA020000022.1 tRNAscan-SE exon 30181 30256 . + . ID=exon-O5C65_003297-1;Parent=rna-O5C65_003297;anticodon=(pos:30214..30216);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003297;product=tRNA-Asn DALFDA020000022.1 tpg gene 30482 31411 . - . ID=gene-O5C65_003298;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=O5C65_003298 DALFDA020000022.1 Protein Homology CDS 30482 31411 . - 0 ID=cds-HJH9173355.1;Parent=gene-O5C65_003298;Dbxref=NCBI_GP:HJH9173355.1;Name=HJH9173355.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460960.1;locus_tag=O5C65_003298;product=L%2CD-transpeptidase;protein_id=HJH9173355.1;transl_table=11 DALFDA020000022.1 tpg gene 31489 32559 . - . ID=gene-O5C65_003299;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=O5C65_003299 DALFDA020000022.1 Protein Homology CDS 31489 32559 . - 0 ID=cds-HJH9173356.1;Parent=gene-O5C65_003299;Dbxref=NCBI_GP:HJH9173356.1;Name=HJH9173356.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460961.1;locus_tag=O5C65_003299;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=HJH9173356.1;transl_table=11 DALFDA020000022.1 tpg gene 32586 33329 . - . ID=gene-O5C65_003300;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=O5C65_003300 DALFDA020000022.1 Protein Homology CDS 32586 33329 . - 0 ID=cds-HJH9173357.1;Parent=gene-O5C65_003300;Dbxref=NCBI_GP:HJH9173357.1;Name=HJH9173357.1;Ontology_term=GO:0009236,GO:0008818,GO:0051073;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA,adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460962.1;locus_tag=O5C65_003300;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=HJH9173357.1;transl_table=11 DALFDA020000022.1 tpg gene 33326 33871 . - . ID=gene-O5C65_003301;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=O5C65_003301 DALFDA020000022.1 Protein Homology CDS 33326 33871 . - 0 ID=cds-HJH9173358.1;Parent=gene-O5C65_003301;Dbxref=NCBI_GP:HJH9173358.1;Name=HJH9173358.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460963.1;locus_tag=O5C65_003301;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=HJH9173358.1;transl_table=11 DALFDA020000022.1 tpg gene 33868 35388 . - . ID=gene-O5C65_003302;Name=O5C65_003302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003302 DALFDA020000022.1 Protein Homology CDS 33868 35388 . - 0 ID=cds-HJH9173359.1;Parent=gene-O5C65_003302;Dbxref=NCBI_GP:HJH9173359.1;Name=HJH9173359.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460964.1;locus_tag=O5C65_003302;product=cobyric acid synthase;protein_id=HJH9173359.1;transl_table=11 DALFDA020000022.1 tpg gene 35385 36200 . - . ID=gene-O5C65_003303;Name=O5C65_003303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003303 DALFDA020000022.1 Protein Homology CDS 35385 36200 . - 0 ID=cds-HJH9173360.1;Parent=gene-O5C65_003303;Dbxref=NCBI_GP:HJH9173360.1;Name=HJH9173360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460965.1;locus_tag=O5C65_003303;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=HJH9173360.1;transl_table=11 DALFDA020000022.1 tpg gene 36209 36886 . - . ID=gene-O5C65_003304;Name=O5C65_003304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003304 DALFDA020000022.1 Protein Homology CDS 36209 36886 . - 0 ID=cds-HJH9173361.1;Parent=gene-O5C65_003304;Dbxref=NCBI_GP:HJH9173361.1;Name=HJH9173361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460966.1;locus_tag=O5C65_003304;product=energy-coupling factor ABC transporter transmembrane protein;protein_id=HJH9173361.1;transl_table=11 DALFDA020000022.1 tpg gene 36873 37154 . - . ID=gene-O5C65_003305;Name=O5C65_003305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003305 DALFDA020000022.1 Protein Homology CDS 36873 37154 . - 0 ID=cds-HJH9173362.1;Parent=gene-O5C65_003305;Dbxref=NCBI_GP:HJH9173362.1;Name=HJH9173362.1;Ontology_term=GO:0006824,GO:0009236,GO:0015087,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460967.1;locus_tag=O5C65_003305;product=energy-coupling factor ABC transporter substrate-binding protein;protein_id=HJH9173362.1;transl_table=11 DALFDA020000022.1 tpg gene 37156 37893 . - . ID=gene-O5C65_003306;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=O5C65_003306 DALFDA020000022.1 Protein Homology CDS 37156 37893 . - 0 ID=cds-HJH9173363.1;Parent=gene-O5C65_003306;Dbxref=NCBI_GP:HJH9173363.1;Name=HJH9173363.1;Ontology_term=GO:0006824,GO:0009236,GO:0016020,GO:0043190;gbkey=CDS;gene=cbiM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=O5C65_003306;product=cobalt ECF transporter S component CbiM;protein_id=HJH9173363.1;transl_table=11 DALFDA020000022.1 tpg gene 37890 38603 . - . ID=gene-O5C65_003307;Name=O5C65_003307;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003307 DALFDA020000022.1 Protein Homology CDS 37890 38603 . - 0 ID=cds-HJH9173364.1;Parent=gene-O5C65_003307;Dbxref=NCBI_GP:HJH9173364.1;Name=HJH9173364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460969.1;locus_tag=O5C65_003307;product=cobalt-factor II C(20)-methyltransferase;protein_id=HJH9173364.1;transl_table=11 DALFDA020000022.1 tpg gene 38600 39394 . - . ID=gene-O5C65_003308;Name=cbiK;gbkey=Gene;gene=cbiK;gene_biotype=protein_coding;locus_tag=O5C65_003308 DALFDA020000022.1 Protein Homology CDS 38600 39394 . - 0 ID=cds-HJH9173365.1;Parent=gene-O5C65_003308;Dbxref=NCBI_GP:HJH9173365.1;Name=HJH9173365.1;Ontology_term=GO:0006779,GO:0016852,GO:0046906;gbkey=CDS;gene=cbiK;go_function=sirohydrochlorin cobaltochelatase activity|0016852||IEA,tetrapyrrole binding|0046906||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460970.1;locus_tag=O5C65_003308;product=sirohydrochlorin cobaltochelatase;protein_id=HJH9173365.1;transl_table=11 DALFDA020000022.1 tpg gene 39397 40188 . - . ID=gene-O5C65_003309;Name=O5C65_003309;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003309 DALFDA020000022.1 Protein Homology CDS 39397 40188 . - 0 ID=cds-HJH9173366.1;Parent=gene-O5C65_003309;Dbxref=NCBI_GP:HJH9173366.1;Name=HJH9173366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460971.1;locus_tag=O5C65_003309;product=cobalt-precorrin-6A reductase;protein_id=HJH9173366.1;transl_table=11 DALFDA020000022.1 tpg gene 40185 40910 . - . ID=gene-O5C65_003310;Name=O5C65_003310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003310 DALFDA020000022.1 Protein Homology CDS 40185 40910 . - 0 ID=cds-HJH9173367.1;Parent=gene-O5C65_003310;Dbxref=NCBI_GP:HJH9173367.1;Name=HJH9173367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460972.1;locus_tag=O5C65_003310;product=precorrin-3B C(17)-methyltransferase;protein_id=HJH9173367.1;transl_table=11 DALFDA020000022.1 tpg gene 40910 41965 . - . ID=gene-O5C65_003311;Name=cbiG;gbkey=Gene;gene=cbiG;gene_biotype=protein_coding;locus_tag=O5C65_003311 DALFDA020000022.1 Protein Homology CDS 40910 41965 . - 0 ID=cds-HJH9173368.1;Parent=gene-O5C65_003311;Dbxref=NCBI_GP:HJH9173368.1;Name=HJH9173368.1;gbkey=CDS;gene=cbiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460973.1;locus_tag=O5C65_003311;product=cobalt-precorrin 5A hydrolase;protein_id=HJH9173368.1;transl_table=11 DALFDA020000022.1 tpg gene 41946 42719 . - . ID=gene-O5C65_003312;Name=O5C65_003312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003312 DALFDA020000022.1 Protein Homology CDS 41946 42719 . - 0 ID=cds-HJH9173369.1;Parent=gene-O5C65_003312;Dbxref=NCBI_GP:HJH9173369.1;Name=HJH9173369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460974.1;locus_tag=O5C65_003312;product=cobalt-precorrin-4 methyltransferase;protein_id=HJH9173369.1;transl_table=11 DALFDA020000022.1 tpg gene 42703 43281 . - . ID=gene-O5C65_003313;Name=O5C65_003313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003313 DALFDA020000022.1 Protein Homology CDS 42703 43281 . - 0 ID=cds-HJH9173370.1;Parent=gene-O5C65_003313;Dbxref=NCBI_GP:HJH9173370.1;Name=HJH9173370.1;Ontology_term=GO:0009236,GO:0008276;gbkey=CDS;go_function=protein methyltransferase activity|0008276||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460975.1;locus_tag=O5C65_003313;product=decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=HJH9173370.1;transl_table=11 DALFDA020000022.1 tpg gene 43271 43876 . - . ID=gene-O5C65_003314;Name=O5C65_003314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003314 DALFDA020000022.1 Protein Homology CDS 43271 43876 . - 0 ID=cds-HJH9173371.1;Parent=gene-O5C65_003314;Dbxref=NCBI_GP:HJH9173371.1;Name=HJH9173371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460976.1;locus_tag=O5C65_003314;product=cobalt-precorrin-7 (C(5))-methyltransferase;protein_id=HJH9173371.1;transl_table=11 DALFDA020000022.1 tpg gene 43870 45009 . - . ID=gene-O5C65_003315;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=protein_coding;locus_tag=O5C65_003315 DALFDA020000022.1 Protein Homology CDS 43870 45009 . - 0 ID=cds-HJH9173372.1;Parent=gene-O5C65_003315;Dbxref=NCBI_GP:HJH9173372.1;Name=HJH9173372.1;Ontology_term=GO:0009236,GO:0005737;gbkey=CDS;gene=cbiD;go_component=cytoplasm|0005737||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460977.1;locus_tag=O5C65_003315;product=cobalt-precorrin-5B (C(1))-methyltransferase CbiD;protein_id=HJH9173372.1;transl_table=11 DALFDA020000022.1 tpg gene 45009 45641 . - . ID=gene-O5C65_003316;Name=O5C65_003316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003316 DALFDA020000022.1 Protein Homology CDS 45009 45641 . - 0 ID=cds-HJH9173373.1;Parent=gene-O5C65_003316;Dbxref=NCBI_GP:HJH9173373.1;Name=HJH9173373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460978.1;locus_tag=O5C65_003316;product=cobalt-precorrin-8 methylmutase;protein_id=HJH9173373.1;transl_table=11 DALFDA020000022.1 tpg gene 45652 46611 . - . ID=gene-O5C65_003317;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=O5C65_003317 DALFDA020000022.1 Protein Homology CDS 45652 46611 . - 0 ID=cds-HJH9173374.1;Parent=gene-O5C65_003317;Dbxref=NCBI_GP:HJH9173374.1;Name=HJH9173374.1;Ontology_term=GO:0009236,GO:0048472,GO:0016020;gbkey=CDS;gene=cbiB;go_component=membrane|0016020||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460979.1;locus_tag=O5C65_003317;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=HJH9173374.1;transl_table=11 DALFDA020000022.1 tpg gene 46608 47987 . - . ID=gene-O5C65_003318;Name=O5C65_003318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003318 DALFDA020000022.1 Protein Homology CDS 46608 47987 . - 0 ID=cds-HJH9173375.1;Parent=gene-O5C65_003318;Dbxref=NCBI_GP:HJH9173375.1;Name=HJH9173375.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460980.1;locus_tag=O5C65_003318;product=cobyrinate a%2Cc-diamide synthase;protein_id=HJH9173375.1;transl_table=11 DALFDA020000022.1 cmsearch riboswitch 48085 48259 . - . ID=id-DALFDA020000022.1:48085..48259;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch DALFDA020000022.1 tpg gene 48585 49496 . - . ID=gene-O5C65_003319;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=protein_coding;locus_tag=O5C65_003319 DALFDA020000022.1 Protein Homology CDS 48585 49496 . - 0 ID=cds-HJH9173376.1;Parent=gene-O5C65_003319;Dbxref=NCBI_GP:HJH9173376.1;Name=HJH9173376.1;Ontology_term=GO:0009236,GO:0051144,GO:0003700,GO:0043565;gbkey=CDS;gene=pocR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,propanediol catabolic process|0051144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460981.1;locus_tag=O5C65_003319;product=transcriptional regulator PocR;protein_id=HJH9173376.1;transl_table=11 DALFDA020000022.1 tpg gene 49713 50507 . - . ID=gene-O5C65_003320;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=O5C65_003320 DALFDA020000022.1 Protein Homology CDS 49713 50507 . - 0 ID=cds-HJH9173377.1;Parent=gene-O5C65_003320;Dbxref=NCBI_GP:HJH9173377.1;Name=HJH9173377.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460982.1;locus_tag=O5C65_003320;product=propanediol diffusion facilitator PduF;protein_id=HJH9173377.1;transl_table=11 DALFDA020000022.1 tpg gene 51032 51316 . + . ID=gene-O5C65_003321;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=O5C65_003321 DALFDA020000022.1 Protein Homology CDS 51032 51316 . + 0 ID=cds-HJH9173378.1;Parent=gene-O5C65_003321;Dbxref=NCBI_GP:HJH9173378.1;Name=HJH9173378.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460983.1;locus_tag=O5C65_003321;product=propanediol utilization microcompartment protein PduA;protein_id=HJH9173378.1;transl_table=11 DALFDA020000022.1 tpg gene 51313 52125 . + . ID=gene-O5C65_003322;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=O5C65_003322 DALFDA020000022.1 Protein Homology CDS 51313 52125 . + 0 ID=cds-HJH9173379.1;Parent=gene-O5C65_003322;Dbxref=NCBI_GP:HJH9173379.1;Name=HJH9173379.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=pduB;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228567.1;locus_tag=O5C65_003322;product=propanediol utilization microcompartment protein PduB;protein_id=HJH9173379.1;transl_table=11 DALFDA020000022.1 tpg gene 52144 53808 . + . ID=gene-O5C65_003323;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=O5C65_003323 DALFDA020000022.1 Protein Homology CDS 52144 53808 . + 0 ID=cds-HJH9173380.1;Parent=gene-O5C65_003323;Dbxref=NCBI_GP:HJH9173380.1;Name=HJH9173380.1;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460985.1;locus_tag=O5C65_003323;product=propanediol dehydratase large subunit PduC;protein_id=HJH9173380.1;transl_table=11 DALFDA020000022.1 tpg gene 53819 54493 . + . ID=gene-O5C65_003324;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=O5C65_003324 DALFDA020000022.1 Protein Homology CDS 53819 54493 . + 0 ID=cds-HJH9173381.1;Parent=gene-O5C65_003324;Dbxref=NCBI_GP:HJH9173381.1;Name=HJH9173381.1;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460986.1;locus_tag=O5C65_003324;product=propanediol dehydratase medium subunit PduD;protein_id=HJH9173381.1;transl_table=11 DALFDA020000022.1 tpg gene 54508 55029 . + . ID=gene-O5C65_003325;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=O5C65_003325 DALFDA020000022.1 Protein Homology CDS 54508 55029 . + 0 ID=cds-HJH9173382.1;Parent=gene-O5C65_003325;Dbxref=NCBI_GP:HJH9173382.1;Name=HJH9173382.1;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460987.1;locus_tag=O5C65_003325;product=propanediol dehydratase small subunit PduE;protein_id=HJH9173382.1;transl_table=11 DALFDA020000022.1 tpg gene 55235 57067 . + . ID=gene-O5C65_003326;Name=pduG;gbkey=Gene;gene=pduG;gene_biotype=protein_coding;locus_tag=O5C65_003326 DALFDA020000022.1 Protein Homology CDS 55235 57067 . + 0 ID=cds-HJH9173383.1;Parent=gene-O5C65_003326;Dbxref=NCBI_GP:HJH9173383.1;Name=HJH9173383.1;gbkey=CDS;gene=pduG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=O5C65_003326;product=propanediol dehydratase reactivase alpha subunit PduG;protein_id=HJH9173383.1;transl_table=11 DALFDA020000022.1 tpg gene 57057 57407 . + . ID=gene-O5C65_003327;Name=pduH;gbkey=Gene;gene=pduH;gene_biotype=protein_coding;locus_tag=O5C65_003327 DALFDA020000022.1 Protein Homology CDS 57057 57407 . + 0 ID=cds-HJH9173384.1;Parent=gene-O5C65_003327;Dbxref=NCBI_GP:HJH9173384.1;Name=HJH9173384.1;gbkey=CDS;gene=pduH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460989.1;locus_tag=O5C65_003327;product=propanediol dehydratase reactivase beta subunit PduH;protein_id=HJH9173384.1;transl_table=11 DALFDA020000022.1 tpg gene 57426 57701 . + . ID=gene-O5C65_003328;Name=pduJ;gbkey=Gene;gene=pduJ;gene_biotype=protein_coding;locus_tag=O5C65_003328 DALFDA020000022.1 Protein Homology CDS 57426 57701 . + 0 ID=cds-HJH9173385.1;Parent=gene-O5C65_003328;Dbxref=NCBI_GP:HJH9173385.1;Name=HJH9173385.1;gbkey=CDS;gene=pduJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460990.1;locus_tag=O5C65_003328;product=propanediol utilization microcompartment protein PduJ;protein_id=HJH9173385.1;transl_table=11 DALFDA020000022.1 tpg gene 57705 58187 . + . ID=gene-O5C65_003329;Name=pduK;gbkey=Gene;gene=pduK;gene_biotype=protein_coding;locus_tag=O5C65_003329 DALFDA020000022.1 Protein Homology CDS 57705 58187 . + 0 ID=cds-HJH9173386.1;Parent=gene-O5C65_003329;Dbxref=NCBI_GP:HJH9173386.1;Name=HJH9173386.1;gbkey=CDS;gene=pduK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460991.3;locus_tag=O5C65_003329;product=propanediol utilization microcompartment protein PduK;protein_id=HJH9173386.1;transl_table=11 DALFDA020000022.1 tpg gene 58187 58819 . + . ID=gene-O5C65_003330;Name=O5C65_003330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003330 DALFDA020000022.1 Protein Homology CDS 58187 58819 . + 0 ID=cds-HJH9173387.1;Parent=gene-O5C65_003330;Dbxref=NCBI_GP:HJH9173387.1;Name=HJH9173387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460992.1;locus_tag=O5C65_003330;product=phosphate propanoyltransferase;protein_id=HJH9173387.1;transl_table=11 DALFDA020000022.1 tpg gene 58816 59307 . + . ID=gene-O5C65_003331;Name=pduM;gbkey=Gene;gene=pduM;gene_biotype=protein_coding;locus_tag=O5C65_003331 DALFDA020000022.1 Protein Homology CDS 58816 59307 . + 0 ID=cds-HJH9173388.1;Parent=gene-O5C65_003331;Dbxref=NCBI_GP:HJH9173388.1;Name=HJH9173388.1;gbkey=CDS;gene=pduM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460993.1;locus_tag=O5C65_003331;product=propanediol utilization microcompartment protein PduM;protein_id=HJH9173388.1;transl_table=11 DALFDA020000022.1 tpg gene 59311 59586 . + . ID=gene-O5C65_003332;Name=pduN;gbkey=Gene;gene=pduN;gene_biotype=protein_coding;locus_tag=O5C65_003332 DALFDA020000022.1 Protein Homology CDS 59311 59586 . + 0 ID=cds-HJH9173389.1;Parent=gene-O5C65_003332;Dbxref=NCBI_GP:HJH9173389.1;Name=HJH9173389.1;gbkey=CDS;gene=pduN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228577.1;locus_tag=O5C65_003332;product=propanediol utilization microcompartment protein PduN;protein_id=HJH9173389.1;transl_table=11 DALFDA020000022.1 tpg gene 59596 60606 . + . ID=gene-O5C65_003333;Name=pduO;gbkey=Gene;gene=pduO;gene_biotype=protein_coding;locus_tag=O5C65_003333 DALFDA020000022.1 Protein Homology CDS 59596 60606 . + 0 ID=cds-HJH9173390.1;Parent=gene-O5C65_003333;Dbxref=NCBI_GP:HJH9173390.1;Name=HJH9173390.1;gbkey=CDS;gene=pduO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460995.1;locus_tag=O5C65_003333;product=two-domain cob(I)yrinic acid a%2Cc-diamide adenosyltransferase PduO;protein_id=HJH9173390.1;transl_table=11 DALFDA020000022.1 tpg gene 60603 61997 . + . ID=gene-O5C65_003334;Name=pduP;gbkey=Gene;gene=pduP;gene_biotype=protein_coding;locus_tag=O5C65_003334 DALFDA020000022.1 Protein Homology CDS 60603 61997 . + 0 ID=cds-HJH9173391.1;Parent=gene-O5C65_003334;Dbxref=NCBI_GP:HJH9173391.1;Name=HJH9173391.1;gbkey=CDS;gene=pduP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460996.1;locus_tag=O5C65_003334;product=CoA-acylating propionaldehyde dehydrogenase PduP;protein_id=HJH9173391.1;transl_table=11 DALFDA020000022.1 tpg gene 62009 63121 . + . ID=gene-O5C65_003335;Name=pduQ;gbkey=Gene;gene=pduQ;gene_biotype=protein_coding;locus_tag=O5C65_003335 DALFDA020000022.1 Protein Homology CDS 62009 63121 . + 0 ID=cds-HJH9173392.1;Parent=gene-O5C65_003335;Dbxref=NCBI_GP:HJH9173392.1;Name=HJH9173392.1;gbkey=CDS;gene=pduQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460997.1;locus_tag=O5C65_003335;product=1-propanol dehydrogenase PduQ;protein_id=HJH9173392.1;transl_table=11 DALFDA020000022.1 tpg gene 63118 64473 . + . ID=gene-O5C65_003336;Name=pduS;gbkey=Gene;gene=pduS;gene_biotype=protein_coding;locus_tag=O5C65_003336 DALFDA020000022.1 Protein Homology CDS 63118 64473 . + 0 ID=cds-HJH9173393.1;Parent=gene-O5C65_003336;Dbxref=NCBI_GP:HJH9173393.1;Name=HJH9173393.1;gbkey=CDS;gene=pduS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460998.1;locus_tag=O5C65_003336;product=cobalamin reductase PduS;protein_id=HJH9173393.1;transl_table=11 DALFDA020000022.1 tpg gene 64476 65030 . + . ID=gene-O5C65_003337;Name=pduT;gbkey=Gene;gene=pduT;gene_biotype=protein_coding;locus_tag=O5C65_003337 DALFDA020000022.1 Protein Homology CDS 64476 65030 . + 0 ID=cds-HJH9173394.1;Parent=gene-O5C65_003337;Dbxref=NCBI_GP:HJH9173394.1;Name=HJH9173394.1;gbkey=CDS;gene=pduT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460999.1;locus_tag=O5C65_003337;product=propanediol utilization microcompartment protein PduT;protein_id=HJH9173394.1;transl_table=11 DALFDA020000022.1 tpg gene 65030 65380 . + . ID=gene-O5C65_003338;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=O5C65_003338 DALFDA020000022.1 Protein Homology CDS 65030 65380 . + 0 ID=cds-HJH9173395.1;Parent=gene-O5C65_003338;Dbxref=NCBI_GP:HJH9173395.1;Name=HJH9173395.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461000.1;locus_tag=O5C65_003338;product=propanediol utilization microcompartment protein PduU;protein_id=HJH9173395.1;transl_table=11 DALFDA020000022.1 tpg gene 65385 65837 . + . ID=gene-O5C65_003339;Name=pduV;gbkey=Gene;gene=pduV;gene_biotype=protein_coding;locus_tag=O5C65_003339 DALFDA020000022.1 Protein Homology CDS 65385 65837 . + 0 ID=cds-HJH9173396.1;Parent=gene-O5C65_003339;Dbxref=NCBI_GP:HJH9173396.1;Name=HJH9173396.1;gbkey=CDS;gene=pduV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461001.1;locus_tag=O5C65_003339;product=propanediol utilization protein PduV;protein_id=HJH9173396.1;transl_table=11 DALFDA020000022.1 tpg gene 65822 67036 . + . ID=gene-O5C65_003340;Name=pduW;gbkey=Gene;gene=pduW;gene_biotype=protein_coding;locus_tag=O5C65_003340 DALFDA020000022.1 Protein Homology CDS 65822 67036 . + 0 ID=cds-HJH9173397.1;Parent=gene-O5C65_003340;Dbxref=NCBI_GP:HJH9173397.1;Name=HJH9173397.1;gbkey=CDS;gene=pduW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461002.1;locus_tag=O5C65_003340;product=propanediol utilization propionate kinase PduW;protein_id=HJH9173397.1;transl_table=11 DALFDA020000022.1 tpg gene 67130 67996 . + . ID=gene-O5C65_003341;Name=pduX;gbkey=Gene;gene=pduX;gene_biotype=protein_coding;locus_tag=O5C65_003341 DALFDA020000022.1 Protein Homology CDS 67130 67996 . + 0 ID=cds-HJH9173398.1;Parent=gene-O5C65_003341;Dbxref=NCBI_GP:HJH9173398.1;Name=HJH9173398.1;gbkey=CDS;gene=pduX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632997.1;locus_tag=O5C65_003341;product=L-threonine kinase PduX;protein_id=HJH9173398.1;transl_table=11 DALFDA020000022.1 tpg gene 68030 68365 . - . ID=gene-O5C65_003342;Name=O5C65_003342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003342 DALFDA020000022.1 Protein Homology CDS 68030 68365 . - 0 ID=cds-HJH9173399.1;Parent=gene-O5C65_003342;Dbxref=NCBI_GP:HJH9173399.1;Name=HJH9173399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461004.1;locus_tag=O5C65_003342;product=DUF496 family protein;protein_id=HJH9173399.1;transl_table=11 DALFDA020000022.1 tpg gene 68610 69668 . - . ID=gene-O5C65_003343;Name=O5C65_003343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003343 DALFDA020000022.1 Protein Homology CDS 68610 69668 . - 0 ID=cds-HJH9173400.1;Parent=gene-O5C65_003343;Dbxref=NCBI_GP:HJH9173400.1;Name=HJH9173400.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461005.1;locus_tag=O5C65_003343;product=FUSC family protein;protein_id=HJH9173400.1;transl_table=11 DALFDA020000022.1 tpg gene 69787 70254 . - . ID=gene-O5C65_003344;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=O5C65_003344 DALFDA020000022.1 Protein Homology CDS 69787 70254 . - 0 ID=cds-HJH9173401.1;Parent=gene-O5C65_003344;Dbxref=NCBI_GP:HJH9173401.1;Name=HJH9173401.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461006.1;locus_tag=O5C65_003344;product=DNA gyrase inhibitor SbmC;protein_id=HJH9173401.1;transl_table=11 DALFDA020000022.1 tpg gene 70405 71577 . - . ID=gene-O5C65_003345;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=O5C65_003345 DALFDA020000022.1 Protein Homology CDS 70405 71577 . - 0 ID=cds-HJH9173402.1;Parent=gene-O5C65_003345;Dbxref=NCBI_GP:HJH9173402.1;Name=HJH9173402.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461007.1;locus_tag=O5C65_003345;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=HJH9173402.1;transl_table=11 DALFDA020000022.1 tpg gene 71701 72465 . - . ID=gene-O5C65_003346;Name=phsC;gbkey=Gene;gene=phsC;gene_biotype=protein_coding;locus_tag=O5C65_003346 DALFDA020000022.1 Protein Homology CDS 71701 72465 . - 0 ID=cds-HJH9173403.1;Parent=gene-O5C65_003346;Dbxref=NCBI_GP:HJH9173403.1;Name=HJH9173403.1;gbkey=CDS;gene=phsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461008.1;locus_tag=O5C65_003346;product=thiosulfate reductase cytochrome B subunit;protein_id=HJH9173403.1;transl_table=11 DALFDA020000022.1 tpg gene 72462 73040 . - . ID=gene-O5C65_003347;Name=phsB;gbkey=Gene;gene=phsB;gene_biotype=protein_coding;locus_tag=O5C65_003347 DALFDA020000022.1 Protein Homology CDS 72462 73040 . - 0 ID=cds-HJH9173404.1;Parent=gene-O5C65_003347;Dbxref=NCBI_GP:HJH9173404.1;Name=HJH9173404.1;gbkey=CDS;gene=phsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461009.1;locus_tag=O5C65_003347;product=thiosulfate reductase electron transport protein PhsB;protein_id=HJH9173404.1;transl_table=11 DALFDA020000022.1 tpg gene 73055 75331 . - . ID=gene-O5C65_003348;Name=phsA;gbkey=Gene;gene=phsA;gene_biotype=protein_coding;locus_tag=O5C65_003348 DALFDA020000022.1 Protein Homology CDS 73055 75331 . - 0 ID=cds-HJH9173405.1;Parent=gene-O5C65_003348;Dbxref=NCBI_GP:HJH9173405.1;Name=HJH9173405.1;Ontology_term=GO:0016491,GO:0043546,GO:0051539;gbkey=CDS;gene=phsA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461010.1;locus_tag=O5C65_003348;product=thiosulfate reductase PhsA;protein_id=HJH9173405.1;transl_table=11 DALFDA020000022.1 tpg pseudogene 75591 75683 . - . ID=gene-O5C65_003349;Name=O5C65_003349;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_003349;pseudo=true DALFDA020000022.1 Protein Homology CDS 75591 75683 . - 0 ID=cds-O5C65_003349;Parent=gene-O5C65_003349;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=O5C65_003349;product=heavy metal-binding domain-containing protein;pseudo=true;transl_table=11 DALFDA020000022.1 tpg gene 75950 78298 . + . ID=gene-O5C65_003350;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=O5C65_003350 DALFDA020000022.1 Protein Homology CDS 75950 78298 . + 0 ID=cds-HJH9173406.1;Parent=gene-O5C65_003350;Dbxref=NCBI_GP:HJH9173406.1;Name=HJH9173406.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461011.1;locus_tag=O5C65_003350;product=SPI-1 type III secretion system effector HECT-type E3 ubiquitin transferase SopA;protein_id=HJH9173406.1;transl_table=11 DALFDA020000022.1 tpg pseudogene 78428 78505 . - . ID=gene-O5C65_003351;Name=O5C65_003351;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_003351;pseudo=true DALFDA020000022.1 Protein Homology CDS 78428 78505 . - 0 ID=cds-O5C65_003351;Parent=gene-O5C65_003351;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226536.1;locus_tag=O5C65_003351;product=hypothetical protein;pseudo=true;transl_table=11 DALFDA020000022.1 tpg gene 78665 80095 . + . ID=gene-O5C65_003352;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=O5C65_003352 DALFDA020000022.1 Protein Homology CDS 78665 80095 . + 0 ID=cds-HJH9173407.1;Parent=gene-O5C65_003352;Dbxref=NCBI_GP:HJH9173407.1;Name=HJH9173407.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461012.1;locus_tag=O5C65_003352;product=exodeoxyribonuclease I;protein_id=HJH9173407.1;transl_table=11 DALFDA020000022.1 tpg gene 80231 81589 . - . ID=gene-O5C65_003353;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=O5C65_003353 DALFDA020000022.1 Protein Homology CDS 80231 81589 . - 0 ID=cds-HJH9173408.1;Parent=gene-O5C65_003353;Dbxref=NCBI_GP:HJH9173408.1;Name=HJH9173408.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=O5C65_003353;product=putrescine/proton symporter PlaP;protein_id=HJH9173408.1;transl_table=11 DALFDA020000022.1 tpg gene 81579 81641 . - . ID=gene-O5C65_003354;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=O5C65_003354 DALFDA020000022.1 Protein Homology CDS 81579 81641 . - 0 ID=cds-HJH9173409.1;Parent=gene-O5C65_003354;Dbxref=NCBI_GP:HJH9173409.1;Name=HJH9173409.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=O5C65_003354;product=membrane protein YoeI;protein_id=HJH9173409.1;transl_table=11 DALFDA020000022.1 tpg gene 81875 82789 . - . ID=gene-O5C65_003355;Name=O5C65_003355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003355 DALFDA020000022.1 Protein Homology CDS 81875 82789 . - 0 ID=cds-HJH9173410.1;Parent=gene-O5C65_003355;Dbxref=NCBI_GP:HJH9173410.1;Name=HJH9173410.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461014.1;locus_tag=O5C65_003355;product=LysR family transcriptional regulator;protein_id=HJH9173410.1;transl_table=11 DALFDA020000022.1 tpg gene 82835 83659 . - . ID=gene-O5C65_003356;Name=O5C65_003356;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003356 DALFDA020000022.1 Protein Homology CDS 82835 83659 . - 0 ID=cds-HJH9173411.1;Parent=gene-O5C65_003356;Dbxref=NCBI_GP:HJH9173411.1;Name=HJH9173411.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461015.1;locus_tag=O5C65_003356;product=SDR family oxidoreductase;protein_id=HJH9173411.1;transl_table=11 DALFDA020000022.1 tpg gene 83821 83871 . + . ID=gene-O5C65_003357;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=O5C65_003357 DALFDA020000022.1 Protein Homology CDS 83821 83871 . + 0 ID=cds-HJH9173412.1;Parent=gene-O5C65_003357;Dbxref=NCBI_GP:HJH9173412.1;Name=HJH9173412.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=O5C65_003357;product=his operon leader peptide;protein_id=HJH9173412.1;transl_table=11 DALFDA020000022.1 cmsearch sequence_feature 83847 83970 . + . ID=id-DALFDA020000022.1:83847..83970;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 DALFDA020000022.1 tpg gene 84017 84916 . + . ID=gene-O5C65_003358;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=O5C65_003358 DALFDA020000022.1 Protein Homology CDS 84017 84916 . + 0 ID=cds-HJH9173413.1;Parent=gene-O5C65_003358;Dbxref=NCBI_GP:HJH9173413.1;Name=HJH9173413.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=O5C65_003358;product=ATP phosphoribosyltransferase;protein_id=HJH9173413.1;transl_table=11 DALFDA020000022.1 tpg gene 85019 86323 . + . ID=gene-O5C65_003359;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=O5C65_003359 DALFDA020000022.1 Protein Homology CDS 85019 86323 . + 0 ID=cds-HJH9173414.1;Parent=gene-O5C65_003359;Dbxref=NCBI_GP:HJH9173414.1;Name=HJH9173414.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461017.1;locus_tag=O5C65_003359;product=histidinol dehydrogenase;protein_id=HJH9173414.1;transl_table=11 DALFDA020000022.1 tpg gene 86320 87399 . + . ID=gene-O5C65_003360;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=O5C65_003360 DALFDA020000022.1 Protein Homology CDS 86320 87399 . + 0 ID=cds-HJH9173415.1;Parent=gene-O5C65_003360;Dbxref=NCBI_GP:HJH9173415.1;Name=HJH9173415.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461018.1;locus_tag=O5C65_003360;product=histidinol-phosphate transaminase;protein_id=HJH9173415.1;transl_table=11 DALFDA020000022.1 tpg gene 87396 88463 . + . ID=gene-O5C65_003361;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=O5C65_003361 DALFDA020000022.1 Protein Homology CDS 87396 88463 . + 0 ID=cds-HJH9173416.1;Parent=gene-O5C65_003361;Dbxref=NCBI_GP:HJH9173416.1;Name=HJH9173416.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461019.1;locus_tag=O5C65_003361;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=HJH9173416.1;transl_table=11 DALFDA020000022.1 tpg gene 88463 89053 . + . ID=gene-O5C65_003362;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=O5C65_003362 DALFDA020000022.1 Protein Homology CDS 88463 89053 . + 0 ID=cds-HJH9173417.1;Parent=gene-O5C65_003362;Dbxref=NCBI_GP:HJH9173417.1;Name=HJH9173417.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=O5C65_003362;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=HJH9173417.1;transl_table=11 DALFDA020000022.1 tpg gene 89053 89790 . + . ID=gene-O5C65_003363;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=O5C65_003363 DALFDA020000022.1 Protein Homology CDS 89053 89790 . + 0 ID=cds-HJH9173418.1;Parent=gene-O5C65_003363;Dbxref=NCBI_GP:HJH9173418.1;Name=HJH9173418.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461021.1;locus_tag=O5C65_003363;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=HJH9173418.1;transl_table=11 DALFDA020000022.1 tpg gene 89772 90548 . + . ID=gene-O5C65_003364;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=O5C65_003364 DALFDA020000022.1 Protein Homology CDS 89772 90548 . + 0 ID=cds-HJH9173419.1;Parent=gene-O5C65_003364;Dbxref=NCBI_GP:HJH9173419.1;Name=HJH9173419.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461022.1;locus_tag=O5C65_003364;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=HJH9173419.1;transl_table=11 DALFDA020000022.1 tpg gene 90542 91153 . + . ID=gene-O5C65_003365;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=O5C65_003365 DALFDA020000022.1 Protein Homology CDS 90542 91153 . + 0 ID=cds-HJH9173420.1;Parent=gene-O5C65_003365;Dbxref=NCBI_GP:HJH9173420.1;Name=HJH9173420.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461023.1;locus_tag=O5C65_003365;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=HJH9173420.1;transl_table=11 DALFDA020000022.1 tpg gene 91234 92217 . - . ID=gene-O5C65_003366;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=O5C65_003366 DALFDA020000022.1 Protein Homology CDS 91234 92217 . - 0 ID=cds-HJH9173421.1;Parent=gene-O5C65_003366;Dbxref=NCBI_GP:HJH9173421.1;Name=HJH9173421.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461024.1;locus_tag=O5C65_003366;product=LPS O-antigen chain length determinant protein WzzB;protein_id=HJH9173421.1;transl_table=11 DALFDA020000022.1 tpg gene 92360 93526 . - . ID=gene-O5C65_003367;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=O5C65_003367 DALFDA020000022.1 Protein Homology CDS 92360 93526 . - 0 ID=cds-HJH9173422.1;Parent=gene-O5C65_003367;Dbxref=NCBI_GP:HJH9173422.1;Name=HJH9173422.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461025.1;locus_tag=O5C65_003367;product=UDP-glucose 6-dehydrogenase;protein_id=HJH9173422.1;transl_table=11 DALFDA020000022.1 tpg gene 93762 95168 . - . ID=gene-O5C65_003368;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=O5C65_003368 DALFDA020000022.1 Protein Homology CDS 93762 95168 . - 0 ID=cds-HJH9173423.1;Parent=gene-O5C65_003368;Dbxref=NCBI_GP:HJH9173423.1;Name=HJH9173423.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461026.1;locus_tag=O5C65_003368;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=HJH9173423.1;transl_table=11 DALFDA020000022.1 tpg gene 95413 96525 . - . ID=gene-O5C65_003369;Name=O5C65_003369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003369 DALFDA020000022.1 Protein Homology CDS 95413 96525 . - 0 ID=cds-HJH9173424.1;Parent=gene-O5C65_003369;Dbxref=NCBI_GP:HJH9173424.1;Name=HJH9173424.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000136911.1;locus_tag=O5C65_003369;product=acyltransferase family protein;protein_id=HJH9173424.1;transl_table=11 DALFDA020000022.1 tpg gene 96700 98130 . - . ID=gene-O5C65_003370;Name=O5C65_003370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003370 DALFDA020000022.1 Protein Homology CDS 96700 98130 . - 0 ID=cds-HJH9173425.1;Parent=gene-O5C65_003370;Dbxref=NCBI_GP:HJH9173425.1;Name=HJH9173425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461027.1;locus_tag=O5C65_003370;product=undecaprenyl-phosphate galactose phosphotransferase;protein_id=HJH9173425.1;transl_table=11 DALFDA020000022.1 tpg gene 98202 99635 . - . ID=gene-O5C65_003371;Name=rfbK;gbkey=Gene;gene=rfbK;gene_biotype=protein_coding;locus_tag=O5C65_003371 DALFDA020000022.1 Protein Homology CDS 98202 99635 . - 0 ID=cds-HJH9173426.1;Parent=gene-O5C65_003371;Dbxref=NCBI_GP:HJH9173426.1;Name=HJH9173426.1;gbkey=CDS;gene=rfbK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461028.1;locus_tag=O5C65_003371;product=O-antigen biosynthesis phosphomannomutase RfbK;protein_id=HJH9173426.1;transl_table=11 DALFDA020000022.1 tpg gene 99622 101061 . - . ID=gene-O5C65_003372;Name=O5C65_003372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003372 DALFDA020000022.1 Protein Homology CDS 99622 101061 . - 0 ID=cds-HJH9173427.1;Parent=gene-O5C65_003372;Dbxref=NCBI_GP:HJH9173427.1;Name=HJH9173427.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461029.1;locus_tag=O5C65_003372;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=HJH9173427.1;transl_table=11 DALFDA020000022.1 tpg gene 101062 102009 . - . ID=gene-O5C65_003373;Name=O5C65_003373;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003373 DALFDA020000022.1 Protein Homology CDS 101062 102009 . - 0 ID=cds-HJH9173428.1;Parent=gene-O5C65_003373;Dbxref=NCBI_GP:HJH9173428.1;Name=HJH9173428.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138993.1;locus_tag=O5C65_003373;product=glycosyltransferase family 2 protein;protein_id=HJH9173428.1;transl_table=11 DALFDA020000022.1 tpg gene 102013 103098 . - . ID=gene-O5C65_003374;Name=O5C65_003374;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003374 DALFDA020000022.1 Protein Homology CDS 102013 103098 . - 0 ID=cds-HJH9173429.1;Parent=gene-O5C65_003374;Dbxref=NCBI_GP:HJH9173429.1;Name=HJH9173429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015633002.1;locus_tag=O5C65_003374;product=glycosyltransferase;protein_id=HJH9173429.1;transl_table=11 DALFDA020000022.1 tpg gene 103091 104269 . - . ID=gene-O5C65_003375;Name=O5C65_003375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003375 DALFDA020000022.1 Protein Homology CDS 103091 104269 . - 0 ID=cds-HJH9173430.1;Parent=gene-O5C65_003375;Dbxref=NCBI_GP:HJH9173430.1;Name=HJH9173430.1;Ontology_term=GO:0008755,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=O antigen polymerase activity|0008755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000231471.1;locus_tag=O5C65_003375;product=O-antigen polymerase;protein_id=HJH9173430.1;transl_table=11 DALFDA020000022.1 tpg gene 104458 105996 . - . ID=gene-O5C65_003376;Name=O5C65_003376;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003376 DALFDA020000022.1 Protein Homology CDS 104458 105996 . - 0 ID=cds-HJH9173431.1;Parent=gene-O5C65_003376;Dbxref=NCBI_GP:HJH9173431.1;Name=HJH9173431.1;Ontology_term=GO:0140327,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=flippase activity|0140327||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000489516.1;locus_tag=O5C65_003376;product=lipopolysaccharide biosynthesis protein;protein_id=HJH9173431.1;transl_table=11 ##sequence-region DALFDA020000023.1 1 97241 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000023.1 tpg region 1 97241 . + . ID=DALFDA020000023.1:1..97241;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000023.1 tpg gene 117 464 . - . ID=gene-O5C65_003377;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=O5C65_003377 DALFDA020000023.1 Protein Homology CDS 117 464 . - 0 ID=cds-HJH9173432.1;Parent=gene-O5C65_003377;Dbxref=NCBI_GP:HJH9173432.1;Name=HJH9173432.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459406.1;locus_tag=O5C65_003377;product=HNH nuclease YajD;protein_id=HJH9173432.1;transl_table=11 DALFDA020000023.1 tpg gene 634 1326 . - . ID=gene-O5C65_003378;Name=O5C65_003378;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003378 DALFDA020000023.1 Protein Homology CDS 634 1326 . - 0 ID=cds-HJH9173433.1;Parent=gene-O5C65_003378;Dbxref=NCBI_GP:HJH9173433.1;Name=HJH9173433.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459405.1;locus_tag=O5C65_003378;product=helix-turn-helix transcriptional regulator;protein_id=HJH9173433.1;transl_table=11 DALFDA020000023.1 tpg gene 1352 1717 . - . ID=gene-O5C65_003379;Name=O5C65_003379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003379 DALFDA020000023.1 Protein Homology CDS 1352 1717 . - 0 ID=cds-HJH9173434.1;Parent=gene-O5C65_003379;Dbxref=NCBI_GP:HJH9173434.1;Name=HJH9173434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459404.1;locus_tag=O5C65_003379;product=VOC family protein;protein_id=HJH9173434.1;transl_table=11 DALFDA020000023.1 tpg gene 1865 2836 . - . ID=gene-O5C65_003380;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=O5C65_003380 DALFDA020000023.1 Protein Homology CDS 1865 2836 . - 0 ID=cds-HJH9173435.1;Parent=gene-O5C65_003380;Dbxref=NCBI_GP:HJH9173435.1;Name=HJH9173435.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459403.1;locus_tag=O5C65_003380;product=protein translocase subunit SecF;protein_id=HJH9173435.1;transl_table=11 DALFDA020000023.1 tpg gene 2847 4694 . - . ID=gene-O5C65_003381;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=O5C65_003381 DALFDA020000023.1 Protein Homology CDS 2847 4694 . - 0 ID=cds-HJH9173436.1;Parent=gene-O5C65_003381;Dbxref=NCBI_GP:HJH9173436.1;Name=HJH9173436.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=O5C65_003381;product=protein translocase subunit SecD;protein_id=HJH9173436.1;transl_table=11 DALFDA020000023.1 tpg gene 4722 5054 . - . ID=gene-O5C65_003382;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=O5C65_003382 DALFDA020000023.1 Protein Homology CDS 4722 5054 . - 0 ID=cds-HJH9173437.1;Parent=gene-O5C65_003382;Dbxref=NCBI_GP:HJH9173437.1;Name=HJH9173437.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=O5C65_003382;product=preprotein translocase subunit YajC;protein_id=HJH9173437.1;transl_table=11 DALFDA020000023.1 tpg gene 5077 6204 . - . ID=gene-O5C65_003383;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=O5C65_003383 DALFDA020000023.1 Protein Homology CDS 5077 6204 . - 0 ID=cds-HJH9173438.1;Parent=gene-O5C65_003383;Dbxref=NCBI_GP:HJH9173438.1;Name=HJH9173438.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=O5C65_003383;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=HJH9173438.1;transl_table=11 DALFDA020000023.1 tpg gene 6401 7465 . - . ID=gene-O5C65_003384;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=O5C65_003384 DALFDA020000023.1 Protein Homology CDS 6401 7465 . - 0 ID=cds-HJH9173439.1;Parent=gene-O5C65_003384;Dbxref=NCBI_GP:HJH9173439.1;Name=HJH9173439.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459399.1;locus_tag=O5C65_003384;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=HJH9173439.1;transl_table=11 DALFDA020000023.1 tpg gene 7559 8140 . + . ID=gene-O5C65_003385;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=O5C65_003385 DALFDA020000023.1 Protein Homology CDS 7559 8140 . + 0 ID=cds-HJH9173440.1;Parent=gene-O5C65_003385;Dbxref=NCBI_GP:HJH9173440.1;Name=HJH9173440.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459398.1;locus_tag=O5C65_003385;product=ACP phosphodiesterase;protein_id=HJH9173440.1;transl_table=11 DALFDA020000023.1 tpg gene 8350 8952 . + . ID=gene-O5C65_003386;Name=O5C65_003386;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003386 DALFDA020000023.1 Protein Homology CDS 8350 8952 . + 0 ID=cds-HJH9173441.1;Parent=gene-O5C65_003386;Dbxref=NCBI_GP:HJH9173441.1;Name=HJH9173441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459397.1;locus_tag=O5C65_003386;product=peroxiredoxin;protein_id=HJH9173441.1;transl_table=11 DALFDA020000023.1 tpg gene 9024 10841 . - . ID=gene-O5C65_003387;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=O5C65_003387 DALFDA020000023.1 Protein Homology CDS 9024 10841 . - 0 ID=cds-HJH9173442.1;Parent=gene-O5C65_003387;Dbxref=NCBI_GP:HJH9173442.1;Name=HJH9173442.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459396.1;locus_tag=O5C65_003387;product=maltodextrin glucosidase;protein_id=HJH9173442.1;transl_table=11 DALFDA020000023.1 tpg gene 11003 12373 . - . ID=gene-O5C65_003388;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=O5C65_003388 DALFDA020000023.1 Protein Homology CDS 11003 12373 . - 0 ID=cds-HJH9173443.1;Parent=gene-O5C65_003388;Dbxref=NCBI_GP:HJH9173443.1;Name=HJH9173443.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459395.1;locus_tag=O5C65_003388;product=proline-specific permease ProY;protein_id=HJH9173443.1;transl_table=11 DALFDA020000023.1 tpg gene 12448 13767 . - . ID=gene-O5C65_003389;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=O5C65_003389 DALFDA020000023.1 Protein Homology CDS 12448 13767 . - 0 ID=cds-HJH9173444.1;Parent=gene-O5C65_003389;Dbxref=NCBI_GP:HJH9173444.1;Name=HJH9173444.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459394.1;locus_tag=O5C65_003389;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=HJH9173444.1;transl_table=11 DALFDA020000023.1 tpg gene 14176 15471 . - . ID=gene-O5C65_003390;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=O5C65_003390 DALFDA020000023.1 Protein Homology CDS 14176 15471 . - 0 ID=cds-HJH9173445.1;Parent=gene-O5C65_003390;Dbxref=NCBI_GP:HJH9173445.1;Name=HJH9173445.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459393.1;locus_tag=O5C65_003390;product=phosphate regulon sensor histidine kinase PhoR;protein_id=HJH9173445.1;transl_table=11 DALFDA020000023.1 tpg gene 15541 16230 . - . ID=gene-O5C65_003391;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=O5C65_003391 DALFDA020000023.1 Protein Homology CDS 15541 16230 . - 0 ID=cds-HJH9173446.1;Parent=gene-O5C65_003391;Dbxref=NCBI_GP:HJH9173446.1;Name=HJH9173446.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=O5C65_003391;product=phosphate response regulator transcription factor PhoB;protein_id=HJH9173446.1;transl_table=11 DALFDA020000023.1 tpg gene 16445 17647 . + . ID=gene-O5C65_003392;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=O5C65_003392 DALFDA020000023.1 Protein Homology CDS 16445 17647 . + 0 ID=cds-HJH9173447.1;Parent=gene-O5C65_003392;Dbxref=NCBI_GP:HJH9173447.1;Name=HJH9173447.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459391.1;locus_tag=O5C65_003392;product=exonuclease subunit SbcD;protein_id=HJH9173447.1;transl_table=11 DALFDA020000023.1 tpg gene 17644 20784 . + . ID=gene-O5C65_003393;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=O5C65_003393 DALFDA020000023.1 Protein Homology CDS 17644 20784 . + 0 ID=cds-HJH9173448.1;Parent=gene-O5C65_003393;Dbxref=NCBI_GP:HJH9173448.1;Name=HJH9173448.1;Ontology_term=GO:0006260,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534028.1;locus_tag=O5C65_003393;product=exonuclease subunit SbcC;protein_id=HJH9173448.1;transl_table=11 DALFDA020000023.1 tpg gene 20957 22129 . + . ID=gene-O5C65_003394;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=O5C65_003394 DALFDA020000023.1 Protein Homology CDS 20957 22129 . + 0 ID=cds-HJH9173449.1;Parent=gene-O5C65_003394;Dbxref=NCBI_GP:HJH9173449.1;Name=HJH9173449.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459389.1;locus_tag=O5C65_003394;product=MFS transporter AraJ;protein_id=HJH9173449.1;transl_table=11 DALFDA020000023.1 tpg gene 22149 23057 . - . ID=gene-O5C65_003395;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=O5C65_003395 DALFDA020000023.1 Protein Homology CDS 22149 23057 . - 0 ID=cds-HJH9173450.1;Parent=gene-O5C65_003395;Dbxref=NCBI_GP:HJH9173450.1;Name=HJH9173450.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459388.1;locus_tag=O5C65_003395;product=fructokinase;protein_id=HJH9173450.1;transl_table=11 DALFDA020000023.1 tpg gene 23183 24094 . + . ID=gene-O5C65_003396;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=O5C65_003396 DALFDA020000023.1 Protein Homology CDS 23183 24094 . + 0 ID=cds-HJH9173451.1;Parent=gene-O5C65_003396;Dbxref=NCBI_GP:HJH9173451.1;Name=HJH9173451.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=O5C65_003396;product=recombination-associated protein RdgC;protein_id=HJH9173451.1;transl_table=11 DALFDA020000023.1 tpg gene 24132 24416 . - . ID=gene-O5C65_003397;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=O5C65_003397 DALFDA020000023.1 Protein Homology CDS 24132 24416 . - 0 ID=cds-HJH9173452.1;Parent=gene-O5C65_003397;Dbxref=NCBI_GP:HJH9173452.1;Name=HJH9173452.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459386.1;locus_tag=O5C65_003397;product=pyrimidine/purine nucleoside phosphorylase;protein_id=HJH9173452.1;transl_table=11 DALFDA020000023.1 tpg gene 24487 25164 . - . ID=gene-O5C65_003398;Name=O5C65_003398;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003398 DALFDA020000023.1 Protein Homology CDS 24487 25164 . - 0 ID=cds-HJH9173453.1;Parent=gene-O5C65_003398;Dbxref=NCBI_GP:HJH9173453.1;Name=HJH9173453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459385.1;locus_tag=O5C65_003398;product=AroM family protein;protein_id=HJH9173453.1;transl_table=11 DALFDA020000023.1 tpg gene 25415 25606 . - . ID=gene-O5C65_003399;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=O5C65_003399 DALFDA020000023.1 Protein Homology CDS 25415 25606 . - 0 ID=cds-HJH9173454.1;Parent=gene-O5C65_003399;Dbxref=NCBI_GP:HJH9173454.1;Name=HJH9173454.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459384.1;locus_tag=O5C65_003399;product=protein YaiA;protein_id=HJH9173454.1;transl_table=11 DALFDA020000023.1 tpg gene 25633 26178 . - . ID=gene-O5C65_003400;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=O5C65_003400 DALFDA020000023.1 Protein Homology CDS 25633 26178 . - 0 ID=cds-HJH9173455.1;Parent=gene-O5C65_003400;Dbxref=NCBI_GP:HJH9173455.1;Name=HJH9173455.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459383.1;locus_tag=O5C65_003400;product=shikimate kinase AroL;protein_id=HJH9173455.1;transl_table=11 DALFDA020000023.1 tpg gene 26363 26818 . - . ID=gene-O5C65_003401;Name=O5C65_003401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003401 DALFDA020000023.1 Protein Homology CDS 26363 26818 . - 0 ID=cds-HJH9173456.1;Parent=gene-O5C65_003401;Dbxref=NCBI_GP:HJH9173456.1;Name=HJH9173456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459382.1;locus_tag=O5C65_003401;product=YaiI/YqxD family protein;protein_id=HJH9173456.1;transl_table=11 DALFDA020000023.1 tpg gene 26958 27767 . + . ID=gene-O5C65_003402;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=O5C65_003402 DALFDA020000023.1 Protein Homology CDS 26958 27767 . + 0 ID=cds-HJH9173457.1;Parent=gene-O5C65_003402;Dbxref=NCBI_GP:HJH9173457.1;Name=HJH9173457.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459381.1;locus_tag=O5C65_003402;product=pyrroline-5-carboxylate reductase;protein_id=HJH9173457.1;transl_table=11 DALFDA020000023.1 tpg gene 27782 28894 . - . ID=gene-O5C65_003403;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=O5C65_003403 DALFDA020000023.1 Protein Homology CDS 27782 28894 . - 0 ID=cds-HJH9173458.1;Parent=gene-O5C65_003403;Dbxref=NCBI_GP:HJH9173458.1;Name=HJH9173458.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459380.1;locus_tag=O5C65_003403;product=diguanylate cyclase AdrA;protein_id=HJH9173458.1;transl_table=11 DALFDA020000023.1 tpg gene 28986 29306 . - . ID=gene-O5C65_003404;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=O5C65_003404 DALFDA020000023.1 Protein Homology CDS 28986 29306 . - 0 ID=cds-HJH9173459.1;Parent=gene-O5C65_003404;Dbxref=NCBI_GP:HJH9173459.1;Name=HJH9173459.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459379.1;locus_tag=O5C65_003404;product=phosphate starvation-inducible protein PsiF;protein_id=HJH9173459.1;transl_table=11 DALFDA020000023.1 tpg gene 29659 29919 . - . ID=gene-O5C65_003405;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=O5C65_003405 DALFDA020000023.1 Protein Homology CDS 29659 29919 . - 0 ID=cds-HJH9173460.1;Parent=gene-O5C65_003405;Dbxref=NCBI_GP:HJH9173460.1;Name=HJH9173460.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748986.1;locus_tag=O5C65_003405;product=anti-adapter protein IraP;protein_id=HJH9173460.1;transl_table=11 DALFDA020000023.1 tpg gene 30216 31427 . - . ID=gene-O5C65_003406;Name=O5C65_003406;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003406 DALFDA020000023.1 Protein Homology CDS 30216 31427 . - 0 ID=cds-HJH9173461.1;Parent=gene-O5C65_003406;Dbxref=NCBI_GP:HJH9173461.1;Name=HJH9173461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459377.1;locus_tag=O5C65_003406;product=multidrug efflux MFS transporter;protein_id=HJH9173461.1;transl_table=11 DALFDA020000023.1 tpg gene 31596 32309 . - . ID=gene-O5C65_003407;Name=O5C65_003407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003407 DALFDA020000023.1 Protein Homology CDS 31596 32309 . - 0 ID=cds-HJH9173462.1;Parent=gene-O5C65_003407;Dbxref=NCBI_GP:HJH9173462.1;Name=HJH9173462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459376.1;locus_tag=O5C65_003407;product=extensin family protein;protein_id=HJH9173462.1;transl_table=11 DALFDA020000023.1 tpg gene 32387 33481 . + . ID=gene-O5C65_003408;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=O5C65_003408 DALFDA020000023.1 Protein Homology CDS 32387 33481 . + 0 ID=cds-HJH9173463.1;Parent=gene-O5C65_003408;Dbxref=NCBI_GP:HJH9173463.1;Name=HJH9173463.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459375.1;locus_tag=O5C65_003408;product=D-alanine--D-alanine ligase;protein_id=HJH9173463.1;transl_table=11 DALFDA020000023.1 tpg gene 33507 33722 . - . ID=gene-O5C65_003409;Name=O5C65_003409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003409 DALFDA020000023.1 Protein Homology CDS 33507 33722 . - 0 ID=cds-HJH9173464.1;Parent=gene-O5C65_003409;Dbxref=NCBI_GP:HJH9173464.1;Name=HJH9173464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459374.1;locus_tag=O5C65_003409;product=DUF2754 family protein;protein_id=HJH9173464.1;transl_table=11 DALFDA020000023.1 tpg gene 33990 34298 . + . ID=gene-O5C65_003410;Name=O5C65_003410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003410 DALFDA020000023.1 Protein Homology CDS 33990 34298 . + 0 ID=cds-HJH9173465.1;Parent=gene-O5C65_003410;Dbxref=NCBI_GP:HJH9173465.1;Name=HJH9173465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459373.1;locus_tag=O5C65_003410;product=YaiY family protein;protein_id=HJH9173465.1;transl_table=11 DALFDA020000023.1 tpg gene 34336 35430 . - . ID=gene-O5C65_003411;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=O5C65_003411 DALFDA020000023.1 Protein Homology CDS 34336 35430 . - 0 ID=cds-HJH9173466.1;Parent=gene-O5C65_003411;Dbxref=NCBI_GP:HJH9173466.1;Name=HJH9173466.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459372.1;locus_tag=O5C65_003411;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=HJH9173466.1;transl_table=11 DALFDA020000023.1 tpg gene 35445 36665 . - . ID=gene-O5C65_003412;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=O5C65_003412 DALFDA020000023.1 Protein Homology CDS 35445 36665 . - 0 ID=cds-HJH9173467.1;Parent=gene-O5C65_003412;Dbxref=NCBI_GP:HJH9173467.1;Name=HJH9173467.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459371.1;locus_tag=O5C65_003412;product=peptide antibiotic transporter SbmA;protein_id=HJH9173467.1;transl_table=11 DALFDA020000023.1 tpg gene 37012 38169 . + . ID=gene-O5C65_003413;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=O5C65_003413 DALFDA020000023.1 Protein Homology CDS 37012 38169 . + 0 ID=cds-HJH9173468.1;Parent=gene-O5C65_003413;Dbxref=NCBI_GP:HJH9173468.1;Name=HJH9173468.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=O5C65_003413;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=HJH9173468.1;transl_table=11 DALFDA020000023.1 tpg gene 38214 38837 . - . ID=gene-O5C65_003414;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=O5C65_003414 DALFDA020000023.1 Protein Homology CDS 38214 38837 . - 0 ID=cds-HJH9173469.1;Parent=gene-O5C65_003414;Dbxref=NCBI_GP:HJH9173469.1;Name=HJH9173469.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459369.1;locus_tag=O5C65_003414;product=hydrogen peroxide resistance inhibitor IprA;protein_id=HJH9173469.1;transl_table=11 DALFDA020000023.1 tpg gene 38922 41933 . - . ID=gene-O5C65_003415;Name=ehaB;gbkey=Gene;gene=ehaB;gene_biotype=protein_coding;locus_tag=O5C65_003415 DALFDA020000023.1 Protein Homology CDS 38922 41933 . - 0 ID=cds-HJH9173470.1;Parent=gene-O5C65_003415;Dbxref=NCBI_GP:HJH9173470.1;Name=HJH9173470.1;gbkey=CDS;gene=ehaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000556401.1;locus_tag=O5C65_003415;product=autotransporter adhesin EhaB;protein_id=HJH9173470.1;transl_table=11 DALFDA020000023.1 tpg gene 42446 43420 . + . ID=gene-O5C65_003416;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=O5C65_003416 DALFDA020000023.1 Protein Homology CDS 42446 43420 . + 0 ID=cds-HJH9173471.1;Parent=gene-O5C65_003416;Dbxref=NCBI_GP:HJH9173471.1;Name=HJH9173471.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459367.1;locus_tag=O5C65_003416;product=porphobilinogen synthase;protein_id=HJH9173471.1;transl_table=11 DALFDA020000023.1 tpg gene 43524 45410 . - . ID=gene-O5C65_003417;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=O5C65_003417 DALFDA020000023.1 Protein Homology CDS 43524 45410 . - 0 ID=cds-HJH9173472.1;Parent=gene-O5C65_003417;Dbxref=NCBI_GP:HJH9173472.1;Name=HJH9173472.1;Ontology_term=GO:0019629,GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459366.1;locus_tag=O5C65_003417;product=propionate--CoA ligase;protein_id=HJH9173472.1;transl_table=11 DALFDA020000023.1 tpg gene 45451 46902 . - . ID=gene-O5C65_003418;Name=O5C65_003418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003418 DALFDA020000023.1 Protein Homology CDS 45451 46902 . - 0 ID=cds-HJH9173473.1;Parent=gene-O5C65_003418;Dbxref=NCBI_GP:HJH9173473.1;Name=HJH9173473.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459365.1;locus_tag=O5C65_003418;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=HJH9173473.1;transl_table=11 DALFDA020000023.1 tpg gene 46942 48111 . - . ID=gene-O5C65_003419;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=O5C65_003419 DALFDA020000023.1 Protein Homology CDS 46942 48111 . - 0 ID=cds-HJH9173474.1;Parent=gene-O5C65_003419;Dbxref=NCBI_GP:HJH9173474.1;Name=HJH9173474.1;Ontology_term=GO:0019679,GO:0004108,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate (Si)-synthase activity|0004108||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459364.1;locus_tag=O5C65_003419;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=HJH9173474.1;transl_table=11 DALFDA020000023.1 tpg gene 48234 49121 . - . ID=gene-O5C65_003420;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=O5C65_003420 DALFDA020000023.1 Protein Homology CDS 48234 49121 . - 0 ID=cds-HJH9173475.1;Parent=gene-O5C65_003420;Dbxref=NCBI_GP:HJH9173475.1;Name=HJH9173475.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459363.1;locus_tag=O5C65_003420;product=methylisocitrate lyase;protein_id=HJH9173475.1;transl_table=11 DALFDA020000023.1 tpg gene 49387 51012 . + . ID=gene-O5C65_003421;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=O5C65_003421 DALFDA020000023.1 Protein Homology CDS 49387 51012 . + 0 ID=cds-HJH9173476.1;Parent=gene-O5C65_003421;Dbxref=NCBI_GP:HJH9173476.1;Name=HJH9173476.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459362.1;locus_tag=O5C65_003421;product=propionate catabolism operon regulatory protein PrpR;protein_id=HJH9173476.1;transl_table=11 DALFDA020000023.1 tpg gene 51148 51423 . - . ID=gene-O5C65_003422;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=O5C65_003422 DALFDA020000023.1 Protein Homology CDS 51148 51423 . - 0 ID=cds-HJH9173477.1;Parent=gene-O5C65_003422;Dbxref=NCBI_GP:HJH9173477.1;Name=HJH9173477.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459361.1;locus_tag=O5C65_003422;product=DUF1471 family periplasmic protein YahO;protein_id=HJH9173477.1;transl_table=11 DALFDA020000023.1 tpg gene 51655 52287 . + . ID=gene-O5C65_003423;Name=O5C65_003423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003423 DALFDA020000023.1 Protein Homology CDS 51655 52287 . + 0 ID=cds-HJH9173478.1;Parent=gene-O5C65_003423;Dbxref=NCBI_GP:HJH9173478.1;Name=HJH9173478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459360.1;locus_tag=O5C65_003423;product=LysE family transporter;protein_id=HJH9173478.1;transl_table=11 DALFDA020000023.1 tpg gene 52328 54436 . - . ID=gene-O5C65_003424;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=O5C65_003424 DALFDA020000023.1 Protein Homology CDS 52328 54436 . - 0 ID=cds-HJH9173479.1;Parent=gene-O5C65_003424;Dbxref=NCBI_GP:HJH9173479.1;Name=HJH9173479.1;Ontology_term=GO:0015344,GO:0038023;gbkey=CDS;gene=foxA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=O5C65_003424;product=ferrioxamine B receptor FoxA;protein_id=HJH9173479.1;transl_table=11 DALFDA020000023.1 tpg gene 54582 55586 . - . ID=gene-O5C65_003425;Name=foxR;gbkey=Gene;gene=foxR;gene_biotype=protein_coding;locus_tag=O5C65_003425 DALFDA020000023.1 Protein Homology CDS 54582 55586 . - 0 ID=cds-HJH9173480.1;Parent=gene-O5C65_003425;Dbxref=NCBI_GP:HJH9173480.1;Name=HJH9173480.1;gbkey=CDS;gene=foxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459358.1;locus_tag=O5C65_003425;product=ferrioxamine uptake transcriptional regulator FoxR;protein_id=HJH9173480.1;transl_table=11 DALFDA020000023.1 tpg pseudogene 55682 55874 . - . ID=gene-O5C65_003426;Name=O5C65_003426;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_003426;pseudo=true DALFDA020000023.1 Protein Homology CDS 55682 55874 . - 0 ID=cds-O5C65_003426;Parent=gene-O5C65_003426;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459357.3;locus_tag=O5C65_003426;product=hypothetical protein;pseudo=true;transl_table=11 DALFDA020000023.1 tpg gene 55793 55978 . - . ID=gene-O5C65_003427;Name=O5C65_003427;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003427 DALFDA020000023.1 Protein Homology CDS 55793 55978 . - 0 ID=cds-HJH9173481.1;Parent=gene-O5C65_003427;Dbxref=NCBI_GP:HJH9173481.1;Name=HJH9173481.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022085.6;locus_tag=O5C65_003427;product=DUF2474 domain-containing protein;protein_id=HJH9173481.1;transl_table=11 DALFDA020000023.1 tpg gene 55924 56934 . - . ID=gene-O5C65_003428;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=O5C65_003428 DALFDA020000023.1 Protein Homology CDS 55924 56934 . - 0 ID=cds-HJH9173482.1;Parent=gene-O5C65_003428;Dbxref=NCBI_GP:HJH9173482.1;Name=HJH9173482.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459356.1;locus_tag=O5C65_003428;product=cytochrome d ubiquinol oxidase subunit II;protein_id=HJH9173482.1;transl_table=11 DALFDA020000023.1 tpg gene 56931 58334 . - . ID=gene-O5C65_003429;Name=O5C65_003429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003429 DALFDA020000023.1 Protein Homology CDS 56931 58334 . - 0 ID=cds-HJH9173483.1;Parent=gene-O5C65_003429;Dbxref=NCBI_GP:HJH9173483.1;Name=HJH9173483.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459355.1;locus_tag=O5C65_003429;product=cytochrome ubiquinol oxidase subunit I;protein_id=HJH9173483.1;transl_table=11 DALFDA020000023.1 tpg gene 58451 58552 . - . ID=gene-O5C65_003430;Name=ssaA;gbkey=Gene;gene=ssaA;gene_biotype=protein_coding;locus_tag=O5C65_003430 DALFDA020000023.1 Protein Homology CDS 58451 58552 . - 0 ID=cds-HJH9173484.1;Parent=gene-O5C65_003430;Dbxref=NCBI_GP:HJH9173484.1;Name=HJH9173484.1;gbkey=CDS;gene=ssaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459354.1;locus_tag=O5C65_003430;product=small effector SsaA;protein_id=HJH9173484.1;transl_table=11 DALFDA020000023.1 tpg gene 58829 61801 . - . ID=gene-O5C65_003431;Name=O5C65_003431;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003431 DALFDA020000023.1 Protein Homology CDS 58829 61801 . - 0 ID=cds-HJH9173485.1;Parent=gene-O5C65_003431;Dbxref=NCBI_GP:HJH9173485.1;Name=HJH9173485.1;Ontology_term=GO:0003677,GO:0016788;gbkey=CDS;go_function=DNA binding|0003677||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=O5C65_003431;product=type III restriction-modification system endonuclease;protein_id=HJH9173485.1;transl_table=11 DALFDA020000023.1 tpg gene 61811 63769 . - . ID=gene-O5C65_003432;Name=O5C65_003432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003432 DALFDA020000023.1 Protein Homology CDS 61811 63769 . - 0 ID=cds-HJH9173486.1;Parent=gene-O5C65_003432;Dbxref=NCBI_GP:HJH9173486.1;Name=HJH9173486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459352.1;locus_tag=O5C65_003432;product=site-specific DNA-methyltransferase;protein_id=HJH9173486.1;transl_table=11 DALFDA020000023.1 tpg gene 63958 65211 . - . ID=gene-O5C65_003433;Name=O5C65_003433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003433 DALFDA020000023.1 Protein Homology CDS 63958 65211 . - 0 ID=cds-HJH9173487.1;Parent=gene-O5C65_003433;Dbxref=NCBI_GP:HJH9173487.1;Name=HJH9173487.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459351.1;locus_tag=O5C65_003433;product=MFS transporter;protein_id=HJH9173487.1;transl_table=11 DALFDA020000023.1 tpg gene 65503 65697 . - . ID=gene-O5C65_003434;Name=golB;gbkey=Gene;gene=golB;gene_biotype=protein_coding;locus_tag=O5C65_003434 DALFDA020000023.1 Protein Homology CDS 65503 65697 . - 0 ID=cds-HJH9173488.1;Parent=gene-O5C65_003434;Dbxref=NCBI_GP:HJH9173488.1;Name=HJH9173488.1;gbkey=CDS;gene=golB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459350.1;locus_tag=O5C65_003434;product=gold resistance metallochaperone GolB;protein_id=HJH9173488.1;transl_table=11 DALFDA020000023.1 tpg gene 65775 66239 . - . ID=gene-O5C65_003435;Name=golS;gbkey=Gene;gene=golS;gene_biotype=protein_coding;locus_tag=O5C65_003435 DALFDA020000023.1 Protein Homology CDS 65775 66239 . - 0 ID=cds-HJH9173489.1;Parent=gene-O5C65_003435;Dbxref=NCBI_GP:HJH9173489.1;Name=HJH9173489.1;gbkey=CDS;gene=golS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459349.1;locus_tag=O5C65_003435;product=Au(I) sensor transcriptional regulator GolS;protein_id=HJH9173489.1;transl_table=11 DALFDA020000023.1 tpg gene 66251 68539 . - . ID=gene-O5C65_003436;Name=golT;gbkey=Gene;gene=golT;gene_biotype=protein_coding;locus_tag=O5C65_003436 DALFDA020000023.1 Protein Homology CDS 66251 68539 . - 0 ID=cds-HJH9173490.1;Parent=gene-O5C65_003436;Dbxref=NCBI_GP:HJH9173490.1;Name=HJH9173490.1;gbkey=CDS;gene=golT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083318.1;locus_tag=O5C65_003436;product=gold/copper-translocating P-type ATPase GolT;protein_id=HJH9173490.1;transl_table=11 DALFDA020000023.1 tpg gene 68816 70042 . + . ID=gene-O5C65_003437;Name=mdsA;gbkey=Gene;gene=mdsA;gene_biotype=protein_coding;locus_tag=O5C65_003437 DALFDA020000023.1 Protein Homology CDS 68816 70042 . + 0 ID=cds-HJH9173491.1;Parent=gene-O5C65_003437;Dbxref=NCBI_GP:HJH9173491.1;Name=HJH9173491.1;gbkey=CDS;gene=mdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459347.3;locus_tag=O5C65_003437;product=multidrug efflux RND transporter periplasmic adaptor subunit MdsA;protein_id=HJH9173491.1;transl_table=11 DALFDA020000023.1 tpg gene 70039 73206 . + . ID=gene-O5C65_003438;Name=mdsB;gbkey=Gene;gene=mdsB;gene_biotype=protein_coding;locus_tag=O5C65_003438 DALFDA020000023.1 Protein Homology CDS 70039 73206 . + 0 ID=cds-HJH9173492.1;Parent=gene-O5C65_003438;Dbxref=NCBI_GP:HJH9173492.1;Name=HJH9173492.1;gbkey=CDS;gene=mdsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459346.1;locus_tag=O5C65_003438;product=multidrug efflux RND transporter permease subunit MdsB;protein_id=HJH9173492.1;transl_table=11 DALFDA020000023.1 tpg gene 73223 74680 . + . ID=gene-O5C65_003439;Name=mdsC;gbkey=Gene;gene=mdsC;gene_biotype=protein_coding;locus_tag=O5C65_003439 DALFDA020000023.1 Protein Homology CDS 73223 74680 . + 0 ID=cds-HJH9173493.1;Parent=gene-O5C65_003439;Dbxref=NCBI_GP:HJH9173493.1;Name=HJH9173493.1;gbkey=CDS;gene=mdsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521068.1;locus_tag=O5C65_003439;product=multidrug efflux transporter outer membrane subunit MdsC;protein_id=HJH9173493.1;transl_table=11 DALFDA020000023.1 tpg gene 74750 75109 . - . ID=gene-O5C65_003440;Name=O5C65_003440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003440 DALFDA020000023.1 Protein Homology CDS 74750 75109 . - 0 ID=cds-HJH9173494.1;Parent=gene-O5C65_003440;Dbxref=NCBI_GP:HJH9173494.1;Name=HJH9173494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459344.1;locus_tag=O5C65_003440;product=DUF4156 domain-containing protein;protein_id=HJH9173494.1;transl_table=11 DALFDA020000023.1 tpg gene 75167 75391 . - . ID=gene-O5C65_003441;Name=O5C65_003441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003441 DALFDA020000023.1 Protein Homology CDS 75167 75391 . - 0 ID=cds-HJH9173495.1;Parent=gene-O5C65_003441;Dbxref=NCBI_GP:HJH9173495.1;Name=HJH9173495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459343.1;locus_tag=O5C65_003441;product=hypothetical protein;protein_id=HJH9173495.1;transl_table=11 DALFDA020000023.1 tpg gene 75402 76043 . - . ID=gene-O5C65_003442;Name=O5C65_003442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003442 DALFDA020000023.1 Protein Homology CDS 75402 76043 . - 0 ID=cds-HJH9173496.1;Parent=gene-O5C65_003442;Dbxref=NCBI_GP:HJH9173496.1;Name=HJH9173496.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459342.1;locus_tag=O5C65_003442;product=helix-turn-helix transcriptional regulator;protein_id=HJH9173496.1;transl_table=11 DALFDA020000023.1 tpg gene 76187 76711 . - . ID=gene-O5C65_003443;Name=O5C65_003443;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003443 DALFDA020000023.1 Protein Homology CDS 76187 76711 . - 0 ID=cds-HJH9173497.1;Parent=gene-O5C65_003443;Dbxref=NCBI_GP:HJH9173497.1;Name=HJH9173497.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459341.1;locus_tag=O5C65_003443;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=HJH9173497.1;transl_table=11 DALFDA020000023.1 tpg gene 77113 77601 . - . ID=gene-O5C65_003444;Name=O5C65_003444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003444 DALFDA020000023.1 Protein Homology CDS 77113 77601 . - 0 ID=cds-HJH9173498.1;Parent=gene-O5C65_003444;Dbxref=NCBI_GP:HJH9173498.1;Name=HJH9173498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459340.1;locus_tag=O5C65_003444;product=hypothetical protein;protein_id=HJH9173498.1;transl_table=11 DALFDA020000023.1 tpg gene 77574 78317 . - . ID=gene-O5C65_003445;Name=O5C65_003445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003445 DALFDA020000023.1 Protein Homology CDS 77574 78317 . - 0 ID=cds-HJH9173499.1;Parent=gene-O5C65_003445;Dbxref=NCBI_GP:HJH9173499.1;Name=HJH9173499.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459339.1;locus_tag=O5C65_003445;product=winged helix-turn-helix domain-containing protein;protein_id=HJH9173499.1;transl_table=11 DALFDA020000023.1 tpg pseudogene 78417 79991 . - . ID=gene-O5C65_003446;Name=O5C65_003446;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_003446;pseudo=true DALFDA020000023.1 Protein Homology CDS 78417 79991 . - 0 ID=cds-O5C65_003446;Parent=gene-O5C65_003446;Note=internal stop;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459338.1;locus_tag=O5C65_003446;product=EAL domain-containing protein;pseudo=true;transl_table=11 DALFDA020000023.1 tpg pseudogene 80493 80793 . - . ID=gene-O5C65_003447;Name=O5C65_003447;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_003447;pseudo=true DALFDA020000023.1 Protein Homology CDS 80493 80793 . - 0 ID=cds-O5C65_003447;Parent=gene-O5C65_003447;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459337.1;locus_tag=O5C65_003447;product=hypothetical protein;pseudo=true;transl_table=11 DALFDA020000023.1 tpg gene 80766 81500 . - . ID=gene-O5C65_003448;Name=O5C65_003448;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003448 DALFDA020000023.1 Protein Homology CDS 80766 81500 . - 0 ID=cds-HJH9173500.1;Parent=gene-O5C65_003448;Dbxref=NCBI_GP:HJH9173500.1;Name=HJH9173500.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001005860.1;locus_tag=O5C65_003448;product=winged helix-turn-helix domain-containing protein;protein_id=HJH9173500.1;transl_table=11 DALFDA020000023.1 tpg gene 82164 82700 . + . ID=gene-O5C65_003449;Name=O5C65_003449;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003449 DALFDA020000023.1 Protein Homology CDS 82164 82700 . + 0 ID=cds-HJH9173501.1;Parent=gene-O5C65_003449;Dbxref=NCBI_GP:HJH9173501.1;Name=HJH9173501.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459335.1;locus_tag=O5C65_003449;product=fimbrial protein;protein_id=HJH9173501.1;transl_table=11 DALFDA020000023.1 tpg gene 82762 83523 . + . ID=gene-O5C65_003450;Name=stbB;gbkey=Gene;gene=stbB;gene_biotype=protein_coding;locus_tag=O5C65_003450 DALFDA020000023.1 Protein Homology CDS 82762 83523 . + 0 ID=cds-HJH9173502.1;Parent=gene-O5C65_003450;Dbxref=NCBI_GP:HJH9173502.1;Name=HJH9173502.1;gbkey=CDS;gene=stbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459334.1;locus_tag=O5C65_003450;product=fimbrial biogenesis chaperone StbB;protein_id=HJH9173502.1;transl_table=11 DALFDA020000023.1 tpg gene 83507 86068 . + . ID=gene-O5C65_003451;Name=O5C65_003451;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003451 DALFDA020000023.1 Protein Homology CDS 83507 86068 . + 0 ID=cds-HJH9173503.1;Parent=gene-O5C65_003451;Dbxref=NCBI_GP:HJH9173503.1;Name=HJH9173503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459333.1;locus_tag=O5C65_003451;product=fimbrial outer membrane usher protein;protein_id=HJH9173503.1;transl_table=11 DALFDA020000023.1 tpg gene 86073 87398 . + . ID=gene-O5C65_003452;Name=stbD;gbkey=Gene;gene=stbD;gene_biotype=protein_coding;locus_tag=O5C65_003452 DALFDA020000023.1 Protein Homology CDS 86073 87398 . + 0 ID=cds-HJH9173504.1;Parent=gene-O5C65_003452;Dbxref=NCBI_GP:HJH9173504.1;Name=HJH9173504.1;gbkey=CDS;gene=stbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459332.1;locus_tag=O5C65_003452;product=fimbrial usher protein StbD;protein_id=HJH9173504.1;transl_table=11 DALFDA020000023.1 tpg gene 87364 88122 . + . ID=gene-O5C65_003453;Name=stbE;gbkey=Gene;gene=stbE;gene_biotype=protein_coding;locus_tag=O5C65_003453 DALFDA020000023.1 Protein Homology CDS 87364 88122 . + 0 ID=cds-HJH9173505.1;Parent=gene-O5C65_003453;Dbxref=NCBI_GP:HJH9173505.1;Name=HJH9173505.1;gbkey=CDS;gene=stbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459331.1;locus_tag=O5C65_003453;product=fimbrial biogenesis chaperone StbE;protein_id=HJH9173505.1;transl_table=11 DALFDA020000023.1 tpg gene 88170 88568 . - . ID=gene-O5C65_003454;Name=O5C65_003454;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003454 DALFDA020000023.1 Protein Homology CDS 88170 88568 . - 0 ID=cds-HJH9173506.1;Parent=gene-O5C65_003454;Dbxref=NCBI_GP:HJH9173506.1;Name=HJH9173506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459330.1;locus_tag=O5C65_003454;product=hypothetical protein;protein_id=HJH9173506.1;transl_table=11 DALFDA020000023.1 tpg gene 89260 89532 . + . ID=gene-O5C65_003455;Name=O5C65_003455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003455 DALFDA020000023.1 Protein Homology CDS 89260 89532 . + 0 ID=cds-HJH9173507.1;Parent=gene-O5C65_003455;Dbxref=NCBI_GP:HJH9173507.1;Name=HJH9173507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459329.1;locus_tag=O5C65_003455;product=cytoplasmic protein;protein_id=HJH9173507.1;transl_table=11 DALFDA020000023.1 tpg gene 89477 90442 . - . ID=gene-O5C65_003456;Name=O5C65_003456;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003456 DALFDA020000023.1 Protein Homology CDS 89477 90442 . - 0 ID=cds-HJH9173508.1;Parent=gene-O5C65_003456;Dbxref=NCBI_GP:HJH9173508.1;Name=HJH9173508.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459328.1;locus_tag=O5C65_003456;product=LysR family transcriptional regulator;protein_id=HJH9173508.1;transl_table=11 DALFDA020000023.1 tpg gene 90476 91390 . - . ID=gene-O5C65_003457;Name=O5C65_003457;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003457 DALFDA020000023.1 Protein Homology CDS 90476 91390 . - 0 ID=cds-HJH9173509.1;Parent=gene-O5C65_003457;Dbxref=NCBI_GP:HJH9173509.1;Name=HJH9173509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459327.1;locus_tag=O5C65_003457;product=alpha/beta fold hydrolase;protein_id=HJH9173509.1;transl_table=11 DALFDA020000023.1 tpg gene 91390 92268 . - . ID=gene-O5C65_003458;Name=O5C65_003458;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003458 DALFDA020000023.1 Protein Homology CDS 91390 92268 . - 0 ID=cds-HJH9173510.1;Parent=gene-O5C65_003458;Dbxref=NCBI_GP:HJH9173510.1;Name=HJH9173510.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459326.1;locus_tag=O5C65_003458;product=fumarylacetoacetate hydrolase family protein;protein_id=HJH9173510.1;transl_table=11 DALFDA020000023.1 tpg gene 92283 92909 . - . ID=gene-O5C65_003459;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=O5C65_003459 DALFDA020000023.1 Protein Homology CDS 92283 92909 . - 0 ID=cds-HJH9173511.1;Parent=gene-O5C65_003459;Dbxref=NCBI_GP:HJH9173511.1;Name=HJH9173511.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459325.1;locus_tag=O5C65_003459;product=3-isopropylmalate dehydratase small subunit;protein_id=HJH9173511.1;transl_table=11 DALFDA020000023.1 tpg gene 92911 94332 . - . ID=gene-O5C65_003460;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=O5C65_003460 DALFDA020000023.1 Protein Homology CDS 92911 94332 . - 0 ID=cds-HJH9173512.1;Parent=gene-O5C65_003460;Dbxref=NCBI_GP:HJH9173512.1;Name=HJH9173512.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459324.1;locus_tag=O5C65_003460;product=3-isopropylmalate dehydratase large subunit;protein_id=HJH9173512.1;transl_table=11 DALFDA020000023.1 tpg gene 94464 95702 . - . ID=gene-O5C65_003461;Name=O5C65_003461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003461 DALFDA020000023.1 Protein Homology CDS 94464 95702 . - 0 ID=cds-HJH9173513.1;Parent=gene-O5C65_003461;Dbxref=NCBI_GP:HJH9173513.1;Name=HJH9173513.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459323.3;locus_tag=O5C65_003461;product=MFS transporter;protein_id=HJH9173513.1;transl_table=11 DALFDA020000023.1 tpg gene 96043 96366 . - . ID=gene-O5C65_003462;Name=O5C65_003462;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003462 DALFDA020000023.1 Protein Homology CDS 96043 96366 . - 0 ID=cds-HJH9173514.1;Parent=gene-O5C65_003462;Dbxref=NCBI_GP:HJH9173514.1;Name=HJH9173514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459322.1;locus_tag=O5C65_003462;product=DUF1889 family protein;protein_id=HJH9173514.1;transl_table=11 DALFDA020000023.1 tpg gene 96476 96604 . - . ID=gene-O5C65_003463;Name=O5C65_003463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003463 DALFDA020000023.1 Protein Homology CDS 96476 96604 . - 0 ID=cds-HJH9173515.1;Parent=gene-O5C65_003463;Dbxref=NCBI_GP:HJH9173515.1;Name=HJH9173515.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020417.6;locus_tag=O5C65_003463;product=diol dehydratase reactivase ATPase-like domain-containing protein;protein_id=HJH9173515.1;transl_table=11 DALFDA020000023.1 tpg pseudogene 96552 96917 . - . ID=gene-O5C65_003464;Name=O5C65_003464;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_003464;pseudo=true DALFDA020000023.1 Protein Homology CDS 96552 96917 . - 0 ID=cds-O5C65_003464;Parent=gene-O5C65_003464;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228916.1;locus_tag=O5C65_003464;product=diol dehydratase reactivase ATPase-like domain-containing protein;pseudo=true;transl_table=11 DALFDA020000023.1 tpg gene 96984 97241 . + . ID=gene-O5C65_003465;Name=O5C65_003465;end_range=97241,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003465;partial=true DALFDA020000023.1 Protein Homology CDS 96984 97241 . + 0 ID=cds-HJH9173516.1;Parent=gene-O5C65_003465;Dbxref=NCBI_GP:HJH9173516.1;Name=HJH9173516.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=97241,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=O5C65_003465;partial=true;product=transposase;protein_id=HJH9173516.1;transl_table=11 ##sequence-region DALFDA020000024.1 1 96707 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000024.1 tpg region 1 96707 . + . ID=DALFDA020000024.1:1..96707;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000024.1 tpg gene 67 1239 . - . ID=gene-O5C65_003466;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=O5C65_003466 DALFDA020000024.1 Protein Homology CDS 67 1239 . - 0 ID=cds-HJH9173517.1;Parent=gene-O5C65_003466;Dbxref=NCBI_GP:HJH9173517.1;Name=HJH9173517.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462212.1;locus_tag=O5C65_003466;product=Obg family GTPase CgtA;protein_id=HJH9173517.1;transl_table=11 DALFDA020000024.1 tpg gene 1255 2220 . - . ID=gene-O5C65_003467;Name=O5C65_003467;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003467 DALFDA020000024.1 Protein Homology CDS 1255 2220 . - 0 ID=cds-HJH9173518.1;Parent=gene-O5C65_003467;Dbxref=NCBI_GP:HJH9173518.1;Name=HJH9173518.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=O5C65_003467;product=DMT family transporter;protein_id=HJH9173518.1;transl_table=11 DALFDA020000024.1 tpg gene 2350 2607 . - . ID=gene-O5C65_003468;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=O5C65_003468 DALFDA020000024.1 Protein Homology CDS 2350 2607 . - 0 ID=cds-HJH9173519.1;Parent=gene-O5C65_003468;Dbxref=NCBI_GP:HJH9173519.1;Name=HJH9173519.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=O5C65_003468;product=50S ribosomal protein L27;protein_id=HJH9173519.1;transl_table=11 DALFDA020000024.1 tpg gene 2627 2938 . - . ID=gene-O5C65_003469;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=O5C65_003469 DALFDA020000024.1 Protein Homology CDS 2627 2938 . - 0 ID=cds-HJH9173520.1;Parent=gene-O5C65_003469;Dbxref=NCBI_GP:HJH9173520.1;Name=HJH9173520.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=O5C65_003469;product=50S ribosomal protein L21;protein_id=HJH9173520.1;transl_table=11 DALFDA020000024.1 tpg gene 3196 4167 . + . ID=gene-O5C65_003470;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=O5C65_003470 DALFDA020000024.1 Protein Homology CDS 3196 4167 . + 0 ID=cds-HJH9173521.1;Parent=gene-O5C65_003470;Dbxref=NCBI_GP:HJH9173521.1;Name=HJH9173521.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462215.1;locus_tag=O5C65_003470;product=octaprenyl diphosphate synthase;protein_id=HJH9173521.1;transl_table=11 DALFDA020000024.1 tpg gene 4399 4686 . + . ID=gene-O5C65_003471;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=O5C65_003471 DALFDA020000024.1 Protein Homology CDS 4399 4686 . + 0 ID=cds-HJH9173522.1;Parent=gene-O5C65_003471;Dbxref=NCBI_GP:HJH9173522.1;Name=HJH9173522.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462216.1;locus_tag=O5C65_003471;product=DNA-binding transcriptional regulator SfsB;protein_id=HJH9173522.1;transl_table=11 DALFDA020000024.1 tpg gene 4744 6003 . - . ID=gene-O5C65_003472;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=O5C65_003472 DALFDA020000024.1 Protein Homology CDS 4744 6003 . - 0 ID=cds-HJH9173523.1;Parent=gene-O5C65_003472;Dbxref=NCBI_GP:HJH9173523.1;Name=HJH9173523.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462217.1;locus_tag=O5C65_003472;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=HJH9173523.1;transl_table=11 DALFDA020000024.1 tpg gene 6057 6311 . - . ID=gene-O5C65_003473;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=O5C65_003473 DALFDA020000024.1 Protein Homology CDS 6057 6311 . - 0 ID=cds-HJH9173524.1;Parent=gene-O5C65_003473;Dbxref=NCBI_GP:HJH9173524.1;Name=HJH9173524.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=O5C65_003473;product=BolA family iron metabolism protein IbaG;protein_id=HJH9173524.1;transl_table=11 DALFDA020000024.1 tpg gene 6499 6795 . - . ID=gene-O5C65_003474;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=O5C65_003474 DALFDA020000024.1 Protein Homology CDS 6499 6795 . - 0 ID=cds-HJH9173525.1;Parent=gene-O5C65_003474;Dbxref=NCBI_GP:HJH9173525.1;Name=HJH9173525.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462219.1;locus_tag=O5C65_003474;product=lipid asymmetry maintenance protein MlaB;protein_id=HJH9173525.1;transl_table=11 DALFDA020000024.1 tpg gene 6795 7430 . - . ID=gene-O5C65_003475;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=O5C65_003475 DALFDA020000024.1 Protein Homology CDS 6795 7430 . - 0 ID=cds-HJH9173526.1;Parent=gene-O5C65_003475;Dbxref=NCBI_GP:HJH9173526.1;Name=HJH9173526.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462220.1;locus_tag=O5C65_003475;product=phospholipid-binding protein MlaC;protein_id=HJH9173526.1;transl_table=11 DALFDA020000024.1 tpg gene 7449 8000 . - . ID=gene-O5C65_003476;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=O5C65_003476 DALFDA020000024.1 Protein Homology CDS 7449 8000 . - 0 ID=cds-HJH9173527.1;Parent=gene-O5C65_003476;Dbxref=NCBI_GP:HJH9173527.1;Name=HJH9173527.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462221.1;locus_tag=O5C65_003476;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=HJH9173527.1;transl_table=11 DALFDA020000024.1 tpg gene 8005 8787 . - . ID=gene-O5C65_003477;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=O5C65_003477 DALFDA020000024.1 Protein Homology CDS 8005 8787 . - 0 ID=cds-HJH9173528.1;Parent=gene-O5C65_003477;Dbxref=NCBI_GP:HJH9173528.1;Name=HJH9173528.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=O5C65_003477;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=HJH9173528.1;transl_table=11 DALFDA020000024.1 tpg gene 8795 9607 . - . ID=gene-O5C65_003478;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=O5C65_003478 DALFDA020000024.1 Protein Homology CDS 8795 9607 . - 0 ID=cds-HJH9173529.1;Parent=gene-O5C65_003478;Dbxref=NCBI_GP:HJH9173529.1;Name=HJH9173529.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462223.1;locus_tag=O5C65_003478;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=HJH9173529.1;transl_table=11 DALFDA020000024.1 tpg gene 9820 10797 . + . ID=gene-O5C65_003479;Name=O5C65_003479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003479 DALFDA020000024.1 Protein Homology CDS 9820 10797 . + 0 ID=cds-HJH9173530.1;Parent=gene-O5C65_003479;Dbxref=NCBI_GP:HJH9173530.1;Name=HJH9173530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462224.1;locus_tag=O5C65_003479;product=calcium/sodium antiporter;protein_id=HJH9173530.1;transl_table=11 DALFDA020000024.1 tpg gene 10811 11797 . + . ID=gene-O5C65_003480;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=O5C65_003480 DALFDA020000024.1 Protein Homology CDS 10811 11797 . + 0 ID=cds-HJH9173531.1;Parent=gene-O5C65_003480;Dbxref=NCBI_GP:HJH9173531.1;Name=HJH9173531.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462225.1;locus_tag=O5C65_003480;product=arabinose-5-phosphate isomerase KdsD;protein_id=HJH9173531.1;transl_table=11 DALFDA020000024.1 tpg gene 11818 12384 . + . ID=gene-O5C65_003481;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=O5C65_003481 DALFDA020000024.1 Protein Homology CDS 11818 12384 . + 0 ID=cds-HJH9173532.1;Parent=gene-O5C65_003481;Dbxref=NCBI_GP:HJH9173532.1;Name=HJH9173532.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462226.1;locus_tag=O5C65_003481;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=HJH9173532.1;transl_table=11 DALFDA020000024.1 tpg gene 12381 12956 . + . ID=gene-O5C65_003482;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=O5C65_003482 DALFDA020000024.1 Protein Homology CDS 12381 12956 . + 0 ID=cds-HJH9173533.1;Parent=gene-O5C65_003482;Dbxref=NCBI_GP:HJH9173533.1;Name=HJH9173533.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462227.1;locus_tag=O5C65_003482;product=LPS export ABC transporter periplasmic protein LptC;protein_id=HJH9173533.1;transl_table=11 DALFDA020000024.1 tpg gene 12925 13479 . + . ID=gene-O5C65_003483;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=O5C65_003483 DALFDA020000024.1 Protein Homology CDS 12925 13479 . + 0 ID=cds-HJH9173534.1;Parent=gene-O5C65_003483;Dbxref=NCBI_GP:HJH9173534.1;Name=HJH9173534.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462228.1;locus_tag=O5C65_003483;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=HJH9173534.1;transl_table=11 DALFDA020000024.1 tpg gene 13486 14211 . + . ID=gene-O5C65_003484;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=O5C65_003484 DALFDA020000024.1 Protein Homology CDS 13486 14211 . + 0 ID=cds-HJH9173535.1;Parent=gene-O5C65_003484;Dbxref=NCBI_GP:HJH9173535.1;Name=HJH9173535.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=O5C65_003484;product=LPS export ABC transporter ATP-binding protein;protein_id=HJH9173535.1;transl_table=11 DALFDA020000024.1 tpg gene 14259 15692 . + . ID=gene-O5C65_003485;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=O5C65_003485 DALFDA020000024.1 Protein Homology CDS 14259 15692 . + 0 ID=cds-HJH9173536.1;Parent=gene-O5C65_003485;Dbxref=NCBI_GP:HJH9173536.1;Name=HJH9173536.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462230.1;locus_tag=O5C65_003485;product=RNA polymerase factor sigma-54;protein_id=HJH9173536.1;transl_table=11 DALFDA020000024.1 tpg gene 15715 16002 . + . ID=gene-O5C65_003486;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=O5C65_003486 DALFDA020000024.1 Protein Homology CDS 15715 16002 . + 0 ID=cds-HJH9173537.1;Parent=gene-O5C65_003486;Dbxref=NCBI_GP:HJH9173537.1;Name=HJH9173537.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462231.1;locus_tag=O5C65_003486;product=ribosome hibernation promoting factor;protein_id=HJH9173537.1;transl_table=11 DALFDA020000024.1 tpg gene 16120 16611 . + . ID=gene-O5C65_003487;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=O5C65_003487 DALFDA020000024.1 Protein Homology CDS 16120 16611 . + 0 ID=cds-HJH9173538.1;Parent=gene-O5C65_003487;Dbxref=NCBI_GP:HJH9173538.1;Name=HJH9173538.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462232.1;locus_tag=O5C65_003487;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=HJH9173538.1;transl_table=11 DALFDA020000024.1 tpg gene 16657 17511 . + . ID=gene-O5C65_003488;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=O5C65_003488 DALFDA020000024.1 Protein Homology CDS 16657 17511 . + 0 ID=cds-HJH9173539.1;Parent=gene-O5C65_003488;Dbxref=NCBI_GP:HJH9173539.1;Name=HJH9173539.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462233.1;locus_tag=O5C65_003488;product=RNase adapter RapZ;protein_id=HJH9173539.1;transl_table=11 DALFDA020000024.1 tpg gene 17508 17780 . + . ID=gene-O5C65_003489;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=O5C65_003489 DALFDA020000024.1 Protein Homology CDS 17508 17780 . + 0 ID=cds-HJH9173540.1;Parent=gene-O5C65_003489;Dbxref=NCBI_GP:HJH9173540.1;Name=HJH9173540.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=O5C65_003489;product=PTS phosphocarrier protein NPr;protein_id=HJH9173540.1;transl_table=11 DALFDA020000024.1 tpg gene 18031 18663 . + . ID=gene-O5C65_003490;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=O5C65_003490 DALFDA020000024.1 Protein Homology CDS 18031 18663 . + 0 ID=cds-HJH9173541.1;Parent=gene-O5C65_003490;Dbxref=NCBI_GP:HJH9173541.1;Name=HJH9173541.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462235.1;locus_tag=O5C65_003490;product=PhoP regulatory network protein YrbL;protein_id=HJH9173541.1;transl_table=11 DALFDA020000024.1 tpg gene 18738 19466 . - . ID=gene-O5C65_003491;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=O5C65_003491 DALFDA020000024.1 Protein Homology CDS 18738 19466 . - 0 ID=cds-HJH9173542.1;Parent=gene-O5C65_003491;Dbxref=NCBI_GP:HJH9173542.1;Name=HJH9173542.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462236.1;locus_tag=O5C65_003491;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=HJH9173542.1;transl_table=11 DALFDA020000024.1 tpg gene 19463 20116 . - . ID=gene-O5C65_003492;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=O5C65_003492 DALFDA020000024.1 Protein Homology CDS 19463 20116 . - 0 ID=cds-HJH9173543.1;Parent=gene-O5C65_003492;Dbxref=NCBI_GP:HJH9173543.1;Name=HJH9173543.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462237.1;locus_tag=O5C65_003492;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=HJH9173543.1;transl_table=11 DALFDA020000024.1 tpg gene 20343 22679 . - . ID=gene-O5C65_003493;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=O5C65_003493 DALFDA020000024.1 Protein Homology CDS 20343 22679 . - 0 ID=cds-HJH9173544.1;Parent=gene-O5C65_003493;Dbxref=NCBI_GP:HJH9173544.1;Name=HJH9173544.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462238.1;locus_tag=O5C65_003493;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=HJH9173544.1;transl_table=11 DALFDA020000024.1 tpg gene 22773 23702 . - . ID=gene-O5C65_003494;Name=O5C65_003494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003494 DALFDA020000024.1 Protein Homology CDS 22773 23702 . - 0 ID=cds-HJH9173545.1;Parent=gene-O5C65_003494;Dbxref=NCBI_GP:HJH9173545.1;Name=HJH9173545.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0051536,GO:1904047;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462239.1;locus_tag=O5C65_003494;product=TIGR01212 family radical SAM protein;protein_id=HJH9173545.1;transl_table=11 DALFDA020000024.1 tpg gene 24374 28834 . + . ID=gene-O5C65_003495;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=O5C65_003495 DALFDA020000024.1 Protein Homology CDS 24374 28834 . + 0 ID=cds-HJH9173546.1;Parent=gene-O5C65_003495;Dbxref=NCBI_GP:HJH9173546.1;Name=HJH9173546.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=O5C65_003495;product=glutamate synthase large subunit;protein_id=HJH9173546.1;transl_table=11 DALFDA020000024.1 tpg gene 28844 30262 . + . ID=gene-O5C65_003496;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=O5C65_003496 DALFDA020000024.1 Protein Homology CDS 28844 30262 . + 0 ID=cds-HJH9173547.1;Parent=gene-O5C65_003496;Dbxref=NCBI_GP:HJH9173547.1;Name=HJH9173547.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=O5C65_003496;product=glutamate synthase subunit GltD;protein_id=HJH9173547.1;transl_table=11 DALFDA020000024.1 tpg gene 30470 31573 . + . ID=gene-O5C65_003497;Name=O5C65_003497;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003497 DALFDA020000024.1 Protein Homology CDS 30470 31573 . + 0 ID=cds-HJH9173548.1;Parent=gene-O5C65_003497;Dbxref=NCBI_GP:HJH9173548.1;Name=HJH9173548.1;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;go_function=DNA binding|0003677||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462242.1;locus_tag=O5C65_003497;product=PDDEXK nuclease domain-containing protein;protein_id=HJH9173548.1;transl_table=11 DALFDA020000024.1 tpg gene 31689 32942 . + . ID=gene-O5C65_003498;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=O5C65_003498 DALFDA020000024.1 Protein Homology CDS 31689 32942 . + 0 ID=cds-HJH9173549.1;Parent=gene-O5C65_003498;Dbxref=NCBI_GP:HJH9173549.1;Name=HJH9173549.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462243.1;locus_tag=O5C65_003498;product=cytosine permease;protein_id=HJH9173549.1;transl_table=11 DALFDA020000024.1 tpg gene 32929 34209 . + . ID=gene-O5C65_003499;Name=O5C65_003499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003499 DALFDA020000024.1 Protein Homology CDS 32929 34209 . + 0 ID=cds-HJH9173550.1;Parent=gene-O5C65_003499;Dbxref=NCBI_GP:HJH9173550.1;Name=HJH9173550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462244.1;locus_tag=O5C65_003499;product=cytosine deaminase;protein_id=HJH9173550.1;transl_table=11 DALFDA020000024.1 tpg gene 34292 34759 . - . ID=gene-O5C65_003500;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=O5C65_003500 DALFDA020000024.1 Protein Homology CDS 34292 34759 . - 0 ID=cds-HJH9173551.1;Parent=gene-O5C65_003500;Dbxref=NCBI_GP:HJH9173551.1;Name=HJH9173551.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462245.1;locus_tag=O5C65_003500;product=N-acetylneuraminate anomerase;protein_id=HJH9173551.1;transl_table=11 DALFDA020000024.1 tpg gene 34756 35631 . - . ID=gene-O5C65_003501;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=O5C65_003501 DALFDA020000024.1 Protein Homology CDS 34756 35631 . - 0 ID=cds-HJH9173552.1;Parent=gene-O5C65_003501;Dbxref=NCBI_GP:HJH9173552.1;Name=HJH9173552.1;Ontology_term=GO:0019262,GO:0005524,GO:0009384;gbkey=CDS;gene=nanK;go_function=ATP binding|0005524||IEA,N-acylmannosamine kinase activity|0009384||IEA;go_process=N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462246.1;locus_tag=O5C65_003501;product=N-acetylmannosamine kinase;protein_id=HJH9173552.1;transl_table=11 DALFDA020000024.1 tpg gene 35628 36317 . - . ID=gene-O5C65_003502;Name=O5C65_003502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003502 DALFDA020000024.1 Protein Homology CDS 35628 36317 . - 0 ID=cds-HJH9173553.1;Parent=gene-O5C65_003502;Dbxref=NCBI_GP:HJH9173553.1;Name=HJH9173553.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462247.1;locus_tag=O5C65_003502;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=HJH9173553.1;transl_table=11 DALFDA020000024.1 tpg gene 36364 37854 . - . ID=gene-O5C65_003503;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=O5C65_003503 DALFDA020000024.1 Protein Homology CDS 36364 37854 . - 0 ID=cds-HJH9173554.1;Parent=gene-O5C65_003503;Dbxref=NCBI_GP:HJH9173554.1;Name=HJH9173554.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462248.1;locus_tag=O5C65_003503;product=sialic acid transporter NanT;protein_id=HJH9173554.1;transl_table=11 DALFDA020000024.1 tpg gene 37970 38863 . - . ID=gene-O5C65_003504;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=O5C65_003504 DALFDA020000024.1 Protein Homology CDS 37970 38863 . - 0 ID=cds-HJH9173555.1;Parent=gene-O5C65_003504;Dbxref=NCBI_GP:HJH9173555.1;Name=HJH9173555.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462249.1;locus_tag=O5C65_003504;product=N-acetylneuraminate lyase;protein_id=HJH9173555.1;transl_table=11 DALFDA020000024.1 tpg gene 38998 39789 . - . ID=gene-O5C65_003505;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=O5C65_003505 DALFDA020000024.1 Protein Homology CDS 38998 39789 . - 0 ID=cds-HJH9173556.1;Parent=gene-O5C65_003505;Dbxref=NCBI_GP:HJH9173556.1;Name=HJH9173556.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462250.1;locus_tag=O5C65_003505;product=transcriptional regulator NanR;protein_id=HJH9173556.1;transl_table=11 DALFDA020000024.1 tpg gene 39898 40398 . - . ID=gene-O5C65_003506;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=O5C65_003506 DALFDA020000024.1 Protein Homology CDS 39898 40398 . - 0 ID=cds-HJH9173557.1;Parent=gene-O5C65_003506;Dbxref=NCBI_GP:HJH9173557.1;Name=HJH9173557.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462251.1;locus_tag=O5C65_003506;product=ClpXP protease specificity-enhancing factor;protein_id=HJH9173557.1;transl_table=11 DALFDA020000024.1 tpg gene 40404 41042 . - . ID=gene-O5C65_003507;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=O5C65_003507 DALFDA020000024.1 Protein Homology CDS 40404 41042 . - 0 ID=cds-HJH9173558.1;Parent=gene-O5C65_003507;Dbxref=NCBI_GP:HJH9173558.1;Name=HJH9173558.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=O5C65_003507;product=stringent starvation protein SspA;protein_id=HJH9173558.1;transl_table=11 DALFDA020000024.1 tpg gene 41305 42057 . - . ID=gene-O5C65_003508;Name=O5C65_003508;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003508 DALFDA020000024.1 Protein Homology CDS 41305 42057 . - 0 ID=cds-HJH9173559.1;Parent=gene-O5C65_003508;Dbxref=NCBI_GP:HJH9173559.1;Name=HJH9173559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462253.1;locus_tag=O5C65_003508;product=DUF695 domain-containing protein;protein_id=HJH9173559.1;transl_table=11 DALFDA020000024.1 tpg gene 42257 42649 . - . ID=gene-O5C65_003509;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=O5C65_003509 DALFDA020000024.1 Protein Homology CDS 42257 42649 . - 0 ID=cds-HJH9173560.1;Parent=gene-O5C65_003509;Dbxref=NCBI_GP:HJH9173560.1;Name=HJH9173560.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=O5C65_003509;product=30S ribosomal protein S9;protein_id=HJH9173560.1;transl_table=11 DALFDA020000024.1 tpg gene 42665 43093 . - . ID=gene-O5C65_003510;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=O5C65_003510 DALFDA020000024.1 Protein Homology CDS 42665 43093 . - 0 ID=cds-HJH9173561.1;Parent=gene-O5C65_003510;Dbxref=NCBI_GP:HJH9173561.1;Name=HJH9173561.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=O5C65_003510;product=50S ribosomal protein L13;protein_id=HJH9173561.1;transl_table=11 DALFDA020000024.1 tpg gene 43395 44519 . - . ID=gene-O5C65_003511;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=O5C65_003511 DALFDA020000024.1 Protein Homology CDS 43395 44519 . - 0 ID=cds-HJH9173562.1;Parent=gene-O5C65_003511;Dbxref=NCBI_GP:HJH9173562.1;Name=HJH9173562.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462256.1;locus_tag=O5C65_003511;product=cell division protein ZapE;protein_id=HJH9173562.1;transl_table=11 DALFDA020000024.1 tpg gene 44712 45110 . + . ID=gene-O5C65_003512;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=O5C65_003512 DALFDA020000024.1 Protein Homology CDS 44712 45110 . + 0 ID=cds-HJH9173563.1;Parent=gene-O5C65_003512;Dbxref=NCBI_GP:HJH9173563.1;Name=HJH9173563.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=O5C65_003512;product=Z-ring associated protein ZapG;protein_id=HJH9173563.1;transl_table=11 DALFDA020000024.1 tpg gene 45267 46634 . + . ID=gene-O5C65_003513;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=O5C65_003513 DALFDA020000024.1 Protein Homology CDS 45267 46634 . + 0 ID=cds-HJH9173564.1;Parent=gene-O5C65_003513;Dbxref=NCBI_GP:HJH9173564.1;Name=HJH9173564.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462258.1;locus_tag=O5C65_003513;product=serine endoprotease DegQ;protein_id=HJH9173564.1;transl_table=11 DALFDA020000024.1 tpg gene 46727 47797 . + . ID=gene-O5C65_003514;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=O5C65_003514 DALFDA020000024.1 Protein Homology CDS 46727 47797 . + 0 ID=cds-HJH9173565.1;Parent=gene-O5C65_003514;Dbxref=NCBI_GP:HJH9173565.1;Name=HJH9173565.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462259.1;locus_tag=O5C65_003514;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=HJH9173565.1;transl_table=11 DALFDA020000024.1 tpg gene 47831 48562 . - . ID=gene-O5C65_003515;Name=O5C65_003515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003515 DALFDA020000024.1 Protein Homology CDS 47831 48562 . - 0 ID=cds-HJH9173566.1;Parent=gene-O5C65_003515;Dbxref=NCBI_GP:HJH9173566.1;Name=HJH9173566.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462260.1;locus_tag=O5C65_003515;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=HJH9173566.1;transl_table=11 DALFDA020000024.1 tpg gene 48582 49883 . - . ID=gene-O5C65_003516;Name=O5C65_003516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003516 DALFDA020000024.1 Protein Homology CDS 48582 49883 . - 0 ID=cds-HJH9173567.1;Parent=gene-O5C65_003516;Dbxref=NCBI_GP:HJH9173567.1;Name=HJH9173567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=O5C65_003516;product=oxalacetate decarboxylase subunit beta;protein_id=HJH9173567.1;transl_table=11 DALFDA020000024.1 tpg gene 49896 51665 . - . ID=gene-O5C65_003517;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=O5C65_003517 DALFDA020000024.1 Protein Homology CDS 49896 51665 . - 0 ID=cds-HJH9173568.1;Parent=gene-O5C65_003517;Dbxref=NCBI_GP:HJH9173568.1;Name=HJH9173568.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=O5C65_003517;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=HJH9173568.1;transl_table=11 DALFDA020000024.1 tpg gene 51681 51929 . - . ID=gene-O5C65_003518;Name=O5C65_003518;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003518 DALFDA020000024.1 Protein Homology CDS 51681 51929 . - 0 ID=cds-HJH9173569.1;Parent=gene-O5C65_003518;Dbxref=NCBI_GP:HJH9173569.1;Name=HJH9173569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462263.1;locus_tag=O5C65_003518;product=oxaloacetate decarboxylase subunit gamma;protein_id=HJH9173569.1;transl_table=11 DALFDA020000024.1 tpg gene 52086 52703 . - . ID=gene-O5C65_003519;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=O5C65_003519 DALFDA020000024.1 Protein Homology CDS 52086 52703 . - 0 ID=cds-HJH9173570.1;Parent=gene-O5C65_003519;Dbxref=NCBI_GP:HJH9173570.1;Name=HJH9173570.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462264.1;locus_tag=O5C65_003519;product=L(+)-tartrate dehydratase subunit beta;protein_id=HJH9173570.1;transl_table=11 DALFDA020000024.1 tpg gene 52703 53602 . - . ID=gene-O5C65_003520;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=O5C65_003520 DALFDA020000024.1 Protein Homology CDS 52703 53602 . - 0 ID=cds-HJH9173571.1;Parent=gene-O5C65_003520;Dbxref=NCBI_GP:HJH9173571.1;Name=HJH9173571.1;Ontology_term=GO:0008730;gbkey=CDS;gene=ttdA;go_function=L(+)-tartrate dehydratase activity|0008730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462265.1;locus_tag=O5C65_003520;product=L(+)-tartrate dehydratase subunit alpha;protein_id=HJH9173571.1;transl_table=11 DALFDA020000024.1 tpg gene 53635 54903 . - . ID=gene-O5C65_003521;Name=O5C65_003521;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003521 DALFDA020000024.1 Protein Homology CDS 53635 54903 . - 0 ID=cds-HJH9173572.1;Parent=gene-O5C65_003521;Dbxref=NCBI_GP:HJH9173572.1;Name=HJH9173572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462266.1;locus_tag=O5C65_003521;product=SLC13 family permease;protein_id=HJH9173572.1;transl_table=11 DALFDA020000024.1 tpg gene 55114 55779 . - . ID=gene-O5C65_003522;Name=O5C65_003522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003522 DALFDA020000024.1 Protein Homology CDS 55114 55779 . - 0 ID=cds-HJH9173573.1;Parent=gene-O5C65_003522;Dbxref=NCBI_GP:HJH9173573.1;Name=HJH9173573.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462267.1;locus_tag=O5C65_003522;product=GntR family transcriptional regulator;protein_id=HJH9173573.1;transl_table=11 DALFDA020000024.1 tpg gene 55766 56395 . - . ID=gene-O5C65_003523;Name=O5C65_003523;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003523 DALFDA020000024.1 Protein Homology CDS 55766 56395 . - 0 ID=cds-HJH9173574.1;Parent=gene-O5C65_003523;Dbxref=NCBI_GP:HJH9173574.1;Name=HJH9173574.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462268.1;locus_tag=O5C65_003523;product=GntR family transcriptional regulator;protein_id=HJH9173574.1;transl_table=11 DALFDA020000024.1 tpg gene 56515 57453 . - . ID=gene-O5C65_003524;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=O5C65_003524 DALFDA020000024.1 Protein Homology CDS 56515 57453 . - 0 ID=cds-HJH9173575.1;Parent=gene-O5C65_003524;Dbxref=NCBI_GP:HJH9173575.1;Name=HJH9173575.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=O5C65_003524;product=malate dehydrogenase;protein_id=HJH9173575.1;transl_table=11 DALFDA020000024.1 tpg gene 57868 58338 . + . ID=gene-O5C65_003525;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=O5C65_003525 DALFDA020000024.1 Protein Homology CDS 57868 58338 . + 0 ID=cds-HJH9173576.1;Parent=gene-O5C65_003525;Dbxref=NCBI_GP:HJH9173576.1;Name=HJH9173576.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=O5C65_003525;product=transcriptional regulator ArgR;protein_id=HJH9173576.1;transl_table=11 DALFDA020000024.1 tpg gene 58703 58966 . + . ID=gene-O5C65_003526;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=O5C65_003526 DALFDA020000024.1 Protein Homology CDS 58703 58966 . + 0 ID=cds-HJH9173577.1;Parent=gene-O5C65_003526;Dbxref=NCBI_GP:HJH9173577.1;Name=HJH9173577.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462271.1;locus_tag=O5C65_003526;product=peroxide/acid stress response protein YhcN;protein_id=HJH9173577.1;transl_table=11 DALFDA020000024.1 tpg gene 59070 59336 . + . ID=gene-O5C65_003527;Name=yhcN-B;gbkey=Gene;gene=yhcN-B;gene_biotype=protein_coding;locus_tag=O5C65_003527 DALFDA020000024.1 Protein Homology CDS 59070 59336 . + 0 ID=cds-HJH9173578.1;Parent=gene-O5C65_003527;Dbxref=NCBI_GP:HJH9173578.1;Name=HJH9173578.1;gbkey=CDS;gene=yhcN-B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462272.1;locus_tag=O5C65_003527;product=DUF1471 family stress response protein YhcN-B;protein_id=HJH9173578.1;transl_table=11 DALFDA020000024.1 tpg gene 59396 59668 . - . ID=gene-O5C65_003528;Name=O5C65_003528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003528 DALFDA020000024.1 Protein Homology CDS 59396 59668 . - 0 ID=cds-HJH9173579.1;Parent=gene-O5C65_003528;Dbxref=NCBI_GP:HJH9173579.1;Name=HJH9173579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462273.1;locus_tag=O5C65_003528;product=barstar family protein;protein_id=HJH9173579.1;transl_table=11 DALFDA020000024.1 tpg gene 59840 61807 . - . ID=gene-O5C65_003529;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=O5C65_003529 DALFDA020000024.1 Protein Homology CDS 59840 61807 . - 0 ID=cds-HJH9173580.1;Parent=gene-O5C65_003529;Dbxref=NCBI_GP:HJH9173580.1;Name=HJH9173580.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462274.1;locus_tag=O5C65_003529;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=HJH9173580.1;transl_table=11 DALFDA020000024.1 tpg gene 61813 62745 . - . ID=gene-O5C65_003530;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=O5C65_003530 DALFDA020000024.1 Protein Homology CDS 61813 62745 . - 0 ID=cds-HJH9173581.1;Parent=gene-O5C65_003530;Dbxref=NCBI_GP:HJH9173581.1;Name=HJH9173581.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462275.1;locus_tag=O5C65_003530;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=HJH9173581.1;transl_table=11 DALFDA020000024.1 tpg gene 62753 62956 . - . ID=gene-O5C65_003531;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=O5C65_003531 DALFDA020000024.1 Protein Homology CDS 62753 62956 . - 0 ID=cds-HJH9173582.1;Parent=gene-O5C65_003531;Dbxref=NCBI_GP:HJH9173582.1;Name=HJH9173582.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=O5C65_003531;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=HJH9173582.1;transl_table=11 DALFDA020000024.1 tpg gene 63138 64067 . + . ID=gene-O5C65_003532;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=O5C65_003532 DALFDA020000024.1 Protein Homology CDS 63138 64067 . + 0 ID=cds-HJH9173583.1;Parent=gene-O5C65_003532;Dbxref=NCBI_GP:HJH9173583.1;Name=HJH9173583.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462277.1;locus_tag=O5C65_003532;product=HTH-type transcriptional activator AaeR;protein_id=HJH9173583.1;transl_table=11 DALFDA020000024.1 tpg gene 64190 65635 . - . ID=gene-O5C65_003533;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=O5C65_003533 DALFDA020000024.1 Protein Homology CDS 64190 65635 . - 0 ID=cds-HJH9173584.1;Parent=gene-O5C65_003533;Dbxref=NCBI_GP:HJH9173584.1;Name=HJH9173584.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=O5C65_003533;product=metalloprotease TldD;protein_id=HJH9173584.1;transl_table=11 DALFDA020000024.1 tpg gene 65780 69580 . - . ID=gene-O5C65_003534;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=O5C65_003534 DALFDA020000024.1 Protein Homology CDS 65780 69580 . - 0 ID=cds-HJH9173585.1;Parent=gene-O5C65_003534;Dbxref=NCBI_GP:HJH9173585.1;Name=HJH9173585.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462279.1;locus_tag=O5C65_003534;product=AsmA2 domain-containing protein YhdP;protein_id=HJH9173585.1;transl_table=11 DALFDA020000024.1 tpg gene 69691 71160 . - . ID=gene-O5C65_003535;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=O5C65_003535 DALFDA020000024.1 Protein Homology CDS 69691 71160 . - 0 ID=cds-HJH9173586.1;Parent=gene-O5C65_003535;Dbxref=NCBI_GP:HJH9173586.1;Name=HJH9173586.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=O5C65_003535;product=ribonuclease G;protein_id=HJH9173586.1;transl_table=11 DALFDA020000024.1 tpg gene 71150 71743 . - . ID=gene-O5C65_003536;Name=O5C65_003536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003536 DALFDA020000024.1 Protein Homology CDS 71150 71743 . - 0 ID=cds-HJH9173587.1;Parent=gene-O5C65_003536;Dbxref=NCBI_GP:HJH9173587.1;Name=HJH9173587.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462281.1;locus_tag=O5C65_003536;product=Maf family protein;protein_id=HJH9173587.1;transl_table=11 DALFDA020000024.1 tpg gene 71752 72240 . - . ID=gene-O5C65_003537;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=O5C65_003537 DALFDA020000024.1 Protein Homology CDS 71752 72240 . - 0 ID=cds-HJH9173588.1;Parent=gene-O5C65_003537;Dbxref=NCBI_GP:HJH9173588.1;Name=HJH9173588.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=O5C65_003537;product=rod shape-determining protein MreD;protein_id=HJH9173588.1;transl_table=11 DALFDA020000024.1 tpg gene 72243 73295 . - . ID=gene-O5C65_003538;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=O5C65_003538 DALFDA020000024.1 Protein Homology CDS 72243 73295 . - 0 ID=cds-HJH9173589.1;Parent=gene-O5C65_003538;Dbxref=NCBI_GP:HJH9173589.1;Name=HJH9173589.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462283.1;locus_tag=O5C65_003538;product=rod shape-determining protein MreC;protein_id=HJH9173589.1;transl_table=11 DALFDA020000024.1 tpg gene 73360 74403 . - . ID=gene-O5C65_003539;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=O5C65_003539 DALFDA020000024.1 Protein Homology CDS 73360 74403 . - 0 ID=cds-HJH9173590.1;Parent=gene-O5C65_003539;Dbxref=NCBI_GP:HJH9173590.1;Name=HJH9173590.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=O5C65_003539;product=rod shape-determining protein MreB;protein_id=HJH9173590.1;transl_table=11 DALFDA020000024.1 tpg gene 74711 76651 . - . ID=gene-O5C65_003540;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=O5C65_003540 DALFDA020000024.1 Protein Homology CDS 74711 76651 . - 0 ID=cds-HJH9173591.1;Parent=gene-O5C65_003540;Dbxref=NCBI_GP:HJH9173591.1;Name=HJH9173591.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462285.1;locus_tag=O5C65_003540;product=RNase E specificity factor CsrD;protein_id=HJH9173591.1;transl_table=11 DALFDA020000024.1 tpg gene 76855 77829 . + . ID=gene-O5C65_003541;Name=O5C65_003541;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003541 DALFDA020000024.1 Protein Homology CDS 76855 77829 . + 0 ID=cds-HJH9173592.1;Parent=gene-O5C65_003541;Dbxref=NCBI_GP:HJH9173592.1;Name=HJH9173592.1;Ontology_term=GO:0004022,GO:0008270,GO:0030554;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462286.1;locus_tag=O5C65_003541;product=MDR family oxidoreductase;protein_id=HJH9173592.1;transl_table=11 DALFDA020000024.1 tpg gene 77942 78946 . + . ID=gene-O5C65_003542;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=O5C65_003542 DALFDA020000024.1 Protein Homology CDS 77942 78946 . + 0 ID=cds-HJH9173593.1;Parent=gene-O5C65_003542;Dbxref=NCBI_GP:HJH9173593.1;Name=HJH9173593.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462287.1;locus_tag=O5C65_003542;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=HJH9173593.1;transl_table=11 DALFDA020000024.1 tpg gene 78947 79546 . + . ID=gene-O5C65_003543;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=O5C65_003543 DALFDA020000024.1 Protein Homology CDS 78947 79546 . + 0 ID=cds-HJH9173594.1;Parent=gene-O5C65_003543;Dbxref=NCBI_GP:HJH9173594.1;Name=HJH9173594.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462288.1;locus_tag=O5C65_003543;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=HJH9173594.1;transl_table=11 DALFDA020000024.1 tpg gene 79939 80409 . + . ID=gene-O5C65_003544;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=O5C65_003544 DALFDA020000024.1 Protein Homology CDS 79939 80409 . + 0 ID=cds-HJH9173595.1;Parent=gene-O5C65_003544;Dbxref=NCBI_GP:HJH9173595.1;Name=HJH9173595.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462289.1;locus_tag=O5C65_003544;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=HJH9173595.1;transl_table=11 DALFDA020000024.1 tpg gene 80420 81769 . + . ID=gene-O5C65_003545;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=O5C65_003545 DALFDA020000024.1 Protein Homology CDS 80420 81769 . + 0 ID=cds-HJH9173596.1;Parent=gene-O5C65_003545;Dbxref=NCBI_GP:HJH9173596.1;Name=HJH9173596.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=O5C65_003545;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=HJH9173596.1;transl_table=11 DALFDA020000024.1 tpg gene 81878 82120 . + . ID=gene-O5C65_003546;Name=O5C65_003546;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003546 DALFDA020000024.1 Protein Homology CDS 81878 82120 . + 0 ID=cds-HJH9173597.1;Parent=gene-O5C65_003546;Dbxref=NCBI_GP:HJH9173597.1;Name=HJH9173597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462291.1;locus_tag=O5C65_003546;product=YhdT family protein;protein_id=HJH9173597.1;transl_table=11 DALFDA020000024.1 tpg gene 82110 83561 . + . ID=gene-O5C65_003547;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=O5C65_003547 DALFDA020000024.1 Protein Homology CDS 82110 83561 . + 0 ID=cds-HJH9173598.1;Parent=gene-O5C65_003547;Dbxref=NCBI_GP:HJH9173598.1;Name=HJH9173598.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462292.1;locus_tag=O5C65_003547;product=sodium/pantothenate symporter;protein_id=HJH9173598.1;transl_table=11 DALFDA020000024.1 tpg gene 83573 84454 . + . ID=gene-O5C65_003548;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=O5C65_003548 DALFDA020000024.1 Protein Homology CDS 83573 84454 . + 0 ID=cds-HJH9173599.1;Parent=gene-O5C65_003548;Dbxref=NCBI_GP:HJH9173599.1;Name=HJH9173599.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462293.1;locus_tag=O5C65_003548;product=50S ribosomal protein L11 methyltransferase;protein_id=HJH9173599.1;transl_table=11 DALFDA020000024.1 tpg gene 85115 86080 . + . ID=gene-O5C65_003549;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=O5C65_003549 DALFDA020000024.1 Protein Homology CDS 85115 86080 . + 0 ID=cds-HJH9173600.1;Parent=gene-O5C65_003549;Dbxref=NCBI_GP:HJH9173600.1;Name=HJH9173600.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=O5C65_003549;product=tRNA dihydrouridine synthase DusB;protein_id=HJH9173600.1;transl_table=11 DALFDA020000024.1 tpg gene 86106 86402 . + . ID=gene-O5C65_003550;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=O5C65_003550 DALFDA020000024.1 Protein Homology CDS 86106 86402 . + 0 ID=cds-HJH9173601.1;Parent=gene-O5C65_003550;Dbxref=NCBI_GP:HJH9173601.1;Name=HJH9173601.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=O5C65_003550;product=DNA-binding transcriptional regulator Fis;protein_id=HJH9173601.1;transl_table=11 DALFDA020000024.1 tpg gene 86488 87372 . + . ID=gene-O5C65_003551;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=O5C65_003551 DALFDA020000024.1 Protein Homology CDS 86488 87372 . + 0 ID=cds-HJH9173602.1;Parent=gene-O5C65_003551;Dbxref=NCBI_GP:HJH9173602.1;Name=HJH9173602.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462296.1;locus_tag=O5C65_003551;product=adenine-specific DNA-methyltransferase;protein_id=HJH9173602.1;transl_table=11 DALFDA020000024.1 tpg gene 87455 87619 . + . ID=gene-O5C65_003552;Name=O5C65_003552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003552 DALFDA020000024.1 Protein Homology CDS 87455 87619 . + 0 ID=cds-HJH9173603.1;Parent=gene-O5C65_003552;Dbxref=NCBI_GP:HJH9173603.1;Name=HJH9173603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462297.1;locus_tag=O5C65_003552;product=DUF2556 family protein;protein_id=HJH9173603.1;transl_table=11 DALFDA020000024.1 tpg gene 87770 89869 . + . ID=gene-O5C65_003553;Name=O5C65_003553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003553 DALFDA020000024.1 Protein Homology CDS 87770 89869 . + 0 ID=cds-HJH9173604.1;Parent=gene-O5C65_003553;Dbxref=NCBI_GP:HJH9173604.1;Name=HJH9173604.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462298.1;locus_tag=O5C65_003553;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=HJH9173604.1;transl_table=11 DALFDA020000024.1 tpg gene 89872 90534 . - . ID=gene-O5C65_003554;Name=envR;gbkey=Gene;gene=envR;gene_biotype=protein_coding;locus_tag=O5C65_003554 DALFDA020000024.1 Protein Homology CDS 89872 90534 . - 0 ID=cds-HJH9173605.1;Parent=gene-O5C65_003554;Dbxref=NCBI_GP:HJH9173605.1;Name=HJH9173605.1;gbkey=CDS;gene=envR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462299.1;locus_tag=O5C65_003554;product=acrEF/envCD operon transcriptional regulator;protein_id=HJH9173605.1;transl_table=11 DALFDA020000024.1 tpg gene 90947 92104 . + . ID=gene-O5C65_003555;Name=O5C65_003555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003555 DALFDA020000024.1 Protein Homology CDS 90947 92104 . + 0 ID=cds-HJH9173606.1;Parent=gene-O5C65_003555;Dbxref=NCBI_GP:HJH9173606.1;Name=HJH9173606.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462300.1;locus_tag=O5C65_003555;product=efflux RND transporter periplasmic adaptor subunit;protein_id=HJH9173606.1;transl_table=11 DALFDA020000024.1 tpg gene 92116 95229 . + . ID=gene-O5C65_003556;Name=O5C65_003556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003556 DALFDA020000024.1 Protein Homology CDS 92116 95229 . + 0 ID=cds-HJH9173607.1;Parent=gene-O5C65_003556;Dbxref=NCBI_GP:HJH9173607.1;Name=HJH9173607.1;Ontology_term=GO:0042908,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462301.1;locus_tag=O5C65_003556;product=efflux RND transporter permease subunit;protein_id=HJH9173607.1;transl_table=11 DALFDA020000024.1 tpg gene 95466 95687 . + . ID=gene-O5C65_003557;Name=O5C65_003557;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003557 DALFDA020000024.1 Protein Homology CDS 95466 95687 . + 0 ID=cds-HJH9173608.1;Parent=gene-O5C65_003557;Dbxref=NCBI_GP:HJH9173608.1;Name=HJH9173608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462302.1;locus_tag=O5C65_003557;product=hypothetical protein;protein_id=HJH9173608.1;transl_table=11 DALFDA020000024.1 tpg gene 96472 96587 . - . ID=gene-O5C65_003558;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=O5C65_003558 DALFDA020000024.1 cmsearch rRNA 96472 96587 . - . ID=rna-O5C65_003558;Parent=gene-O5C65_003558;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_003558;product=5S ribosomal RNA DALFDA020000024.1 cmsearch exon 96472 96587 . - . ID=exon-O5C65_003558-1;Parent=rna-O5C65_003558;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_003558;product=5S ribosomal RNA DALFDA020000024.1 tpg gene 96627 96702 . - . ID=gene-O5C65_003559;Name=O5C65_003559;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_003559 DALFDA020000024.1 tRNAscan-SE tRNA 96627 96702 . - . ID=rna-O5C65_003559;Parent=gene-O5C65_003559;anticodon=(pos:complement(96667..96669));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003559;product=tRNA-Thr DALFDA020000024.1 tRNAscan-SE exon 96627 96702 . - . ID=exon-O5C65_003559-1;Parent=rna-O5C65_003559;anticodon=(pos:complement(96667..96669));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003559;product=tRNA-Thr ##sequence-region DALFDA020000025.1 1 92871 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000025.1 tpg region 1 92871 . + . ID=DALFDA020000025.1:1..92871;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000025.1 tpg gene 109 999 . - . ID=gene-O5C65_003560;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=O5C65_003560 DALFDA020000025.1 Protein Homology CDS 109 999 . - 0 ID=cds-HJH9173609.1;Parent=gene-O5C65_003560;Dbxref=NCBI_GP:HJH9173609.1;Name=HJH9173609.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463092.1;locus_tag=O5C65_003560;product=maltose ABC transporter permease MalG;protein_id=HJH9173609.1;transl_table=11 DALFDA020000025.1 tpg gene 1014 2558 . - . ID=gene-O5C65_003561;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=O5C65_003561 DALFDA020000025.1 Protein Homology CDS 1014 2558 . - 0 ID=cds-HJH9173610.1;Parent=gene-O5C65_003561;Dbxref=NCBI_GP:HJH9173610.1;Name=HJH9173610.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463093.1;locus_tag=O5C65_003561;product=maltose ABC transporter permease MalF;protein_id=HJH9173610.1;transl_table=11 DALFDA020000025.1 tpg pseudogene 2601 2741 . + . ID=gene-O5C65_003562;Name=O5C65_003562;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_003562;pseudo=true DALFDA020000025.1 Protein Homology CDS 2601 2741 . + 0 ID=cds-O5C65_003562;Parent=gene-O5C65_003562;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=O5C65_003562;product=hypothetical protein;pseudo=true;transl_table=11 DALFDA020000025.1 tpg gene 2690 3880 . - . ID=gene-O5C65_003563;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=O5C65_003563 DALFDA020000025.1 Protein Homology CDS 2690 3880 . - 0 ID=cds-HJH9173611.1;Parent=gene-O5C65_003563;Dbxref=NCBI_GP:HJH9173611.1;Name=HJH9173611.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=O5C65_003563;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=HJH9173611.1;transl_table=11 DALFDA020000025.1 tpg gene 4242 5351 . + . ID=gene-O5C65_003564;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=O5C65_003564 DALFDA020000025.1 Protein Homology CDS 4242 5351 . + 0 ID=cds-HJH9173612.1;Parent=gene-O5C65_003564;Dbxref=NCBI_GP:HJH9173612.1;Name=HJH9173612.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=O5C65_003564;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=HJH9173612.1;transl_table=11 DALFDA020000025.1 tpg gene 5440 6798 . + . ID=gene-O5C65_003565;Name=O5C65_003565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003565 DALFDA020000025.1 Protein Homology CDS 5440 6798 . + 0 ID=cds-HJH9173613.1;Parent=gene-O5C65_003565;Dbxref=NCBI_GP:HJH9173613.1;Name=HJH9173613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463096.1;locus_tag=O5C65_003565;product=maltoporin;protein_id=HJH9173613.1;transl_table=11 DALFDA020000025.1 tpg gene 6962 7879 . + . ID=gene-O5C65_003566;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=O5C65_003566 DALFDA020000025.1 Protein Homology CDS 6962 7879 . + 0 ID=cds-HJH9173614.1;Parent=gene-O5C65_003566;Dbxref=NCBI_GP:HJH9173614.1;Name=HJH9173614.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463097.1;locus_tag=O5C65_003566;product=maltose operon protein MalM;protein_id=HJH9173614.1;transl_table=11 DALFDA020000025.1 tpg gene 8061 8558 . + . ID=gene-O5C65_003567;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=O5C65_003567 DALFDA020000025.1 Protein Homology CDS 8061 8558 . + 0 ID=cds-HJH9173615.1;Parent=gene-O5C65_003567;Dbxref=NCBI_GP:HJH9173615.1;Name=HJH9173615.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463098.1;locus_tag=O5C65_003567;product=chorismate lyase;protein_id=HJH9173615.1;transl_table=11 DALFDA020000025.1 tpg gene 8572 9444 . + . ID=gene-O5C65_003568;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=O5C65_003568 DALFDA020000025.1 Protein Homology CDS 8572 9444 . + 0 ID=cds-HJH9173616.1;Parent=gene-O5C65_003568;Dbxref=NCBI_GP:HJH9173616.1;Name=HJH9173616.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132667.1;locus_tag=O5C65_003568;product=4-hydroxybenzoate octaprenyltransferase;protein_id=HJH9173616.1;transl_table=11 DALFDA020000025.1 tpg gene 9543 11963 . - . ID=gene-O5C65_003569;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=O5C65_003569 DALFDA020000025.1 Protein Homology CDS 9543 11963 . - 0 ID=cds-HJH9173617.1;Parent=gene-O5C65_003569;Dbxref=NCBI_GP:HJH9173617.1;Name=HJH9173617.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463100.1;locus_tag=O5C65_003569;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=HJH9173617.1;transl_table=11 DALFDA020000025.1 tpg gene 12134 12502 . + . ID=gene-O5C65_003570;Name=O5C65_003570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003570 DALFDA020000025.1 Protein Homology CDS 12134 12502 . + 0 ID=cds-HJH9173618.1;Parent=gene-O5C65_003570;Dbxref=NCBI_GP:HJH9173618.1;Name=HJH9173618.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872;gbkey=CDS;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463101.1;locus_tag=O5C65_003570;product=diacylglycerol kinase;protein_id=HJH9173618.1;transl_table=11 DALFDA020000025.1 tpg gene 12611 13219 . + . ID=gene-O5C65_003571;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=O5C65_003571 DALFDA020000025.1 Protein Homology CDS 12611 13219 . + 0 ID=cds-HJH9173619.1;Parent=gene-O5C65_003571;Dbxref=NCBI_GP:HJH9173619.1;Name=HJH9173619.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=O5C65_003571;product=transcriptional repressor LexA;protein_id=HJH9173619.1;transl_table=11 DALFDA020000025.1 tpg gene 13398 14723 . + . ID=gene-O5C65_003572;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=O5C65_003572 DALFDA020000025.1 Protein Homology CDS 13398 14723 . + 0 ID=cds-HJH9173620.1;Parent=gene-O5C65_003572;Dbxref=NCBI_GP:HJH9173620.1;Name=HJH9173620.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463103.1;locus_tag=O5C65_003572;product=MATE family efflux transporter DinF;protein_id=HJH9173620.1;transl_table=11 DALFDA020000025.1 tpg gene 14720 14833 . + . ID=gene-O5C65_003573;Name=O5C65_003573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003573 DALFDA020000025.1 Protein Homology CDS 14720 14833 . + 0 ID=cds-HJH9173621.1;Parent=gene-O5C65_003573;Dbxref=NCBI_GP:HJH9173621.1;Name=HJH9173621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463104.1;locus_tag=O5C65_003573;product=hypothetical protein;protein_id=HJH9173621.1;transl_table=11 DALFDA020000025.1 tpg gene 14855 15064 . + . ID=gene-O5C65_003574;Name=O5C65_003574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003574 DALFDA020000025.1 Protein Homology CDS 14855 15064 . + 0 ID=cds-HJH9173622.1;Parent=gene-O5C65_003574;Dbxref=NCBI_GP:HJH9173622.1;Name=HJH9173622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=O5C65_003574;product=CsbD family protein;protein_id=HJH9173622.1;transl_table=11 DALFDA020000025.1 tpg gene 15163 15678 . - . ID=gene-O5C65_003575;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=O5C65_003575 DALFDA020000025.1 Protein Homology CDS 15163 15678 . - 0 ID=cds-HJH9173623.1;Parent=gene-O5C65_003575;Dbxref=NCBI_GP:HJH9173623.1;Name=HJH9173623.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463106.1;locus_tag=O5C65_003575;product=zinc uptake transcriptional repressor Zur;protein_id=HJH9173623.1;transl_table=11 DALFDA020000025.1 tpg gene 15925 17235 . + . ID=gene-O5C65_003576;Name=O5C65_003576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003576 DALFDA020000025.1 Protein Homology CDS 15925 17235 . + 0 ID=cds-HJH9173624.1;Parent=gene-O5C65_003576;Dbxref=NCBI_GP:HJH9173624.1;Name=HJH9173624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463107.1;locus_tag=O5C65_003576;product=conjugal transfer protein TraF;protein_id=HJH9173624.1;transl_table=11 DALFDA020000025.1 tpg gene 17323 18321 . + . ID=gene-O5C65_003577;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=O5C65_003577 DALFDA020000025.1 Protein Homology CDS 17323 18321 . + 0 ID=cds-HJH9173625.1;Parent=gene-O5C65_003577;Dbxref=NCBI_GP:HJH9173625.1;Name=HJH9173625.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463108.1;locus_tag=O5C65_003577;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=HJH9173625.1;transl_table=11 DALFDA020000025.1 tpg gene 18489 18731 . + . ID=gene-O5C65_003578;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=O5C65_003578 DALFDA020000025.1 Protein Homology CDS 18489 18731 . + 0 ID=cds-HJH9173626.1;Parent=gene-O5C65_003578;Dbxref=NCBI_GP:HJH9173626.1;Name=HJH9173626.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463109.1;locus_tag=O5C65_003578;product=envelope stress response protein PspG;protein_id=HJH9173626.1;transl_table=11 DALFDA020000025.1 tpg gene 18906 19889 . - . ID=gene-O5C65_003579;Name=O5C65_003579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003579 DALFDA020000025.1 Protein Homology CDS 18906 19889 . - 0 ID=cds-HJH9173627.1;Parent=gene-O5C65_003579;Dbxref=NCBI_GP:HJH9173627.1;Name=HJH9173627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463110.1;locus_tag=O5C65_003579;product=quinone oxidoreductase;protein_id=HJH9173627.1;transl_table=11 DALFDA020000025.1 tpg gene 19954 21369 . + . ID=gene-O5C65_003580;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=O5C65_003580 DALFDA020000025.1 Protein Homology CDS 19954 21369 . + 0 ID=cds-HJH9173628.1;Parent=gene-O5C65_003580;Dbxref=NCBI_GP:HJH9173628.1;Name=HJH9173628.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463111.1;locus_tag=O5C65_003580;product=replicative DNA helicase;protein_id=HJH9173628.1;transl_table=11 DALFDA020000025.1 tpg gene 21401 22480 . + . ID=gene-O5C65_003581;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=O5C65_003581 DALFDA020000025.1 Protein Homology CDS 21401 22480 . + 0 ID=cds-HJH9173629.1;Parent=gene-O5C65_003581;Dbxref=NCBI_GP:HJH9173629.1;Name=HJH9173629.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463112.1;locus_tag=O5C65_003581;product=alanine racemase;protein_id=HJH9173629.1;transl_table=11 DALFDA020000025.1 tpg gene 22666 23859 . + . ID=gene-O5C65_003582;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=O5C65_003582 DALFDA020000025.1 Protein Homology CDS 22666 23859 . + 0 ID=cds-HJH9173630.1;Parent=gene-O5C65_003582;Dbxref=NCBI_GP:HJH9173630.1;Name=HJH9173630.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463113.1;locus_tag=O5C65_003582;product=aromatic amino acid transaminase;protein_id=HJH9173630.1;transl_table=11 DALFDA020000025.1 tpg gene 24046 24759 . + . ID=gene-O5C65_003583;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=O5C65_003583 DALFDA020000025.1 Protein Homology CDS 24046 24759 . + 0 ID=cds-HJH9173631.1;Parent=gene-O5C65_003583;Dbxref=NCBI_GP:HJH9173631.1;Name=HJH9173631.1;Ontology_term=GO:0003993,GO:0030288;gbkey=CDS;gene=aphA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463114.1;locus_tag=O5C65_003583;product=acid phosphatase AphA;protein_id=HJH9173631.1;transl_table=11 DALFDA020000025.1 tpg gene 24888 25304 . + . ID=gene-O5C65_003584;Name=O5C65_003584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003584 DALFDA020000025.1 Protein Homology CDS 24888 25304 . + 0 ID=cds-HJH9173632.1;Parent=gene-O5C65_003584;Dbxref=NCBI_GP:HJH9173632.1;Name=HJH9173632.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463115.1;locus_tag=O5C65_003584;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=HJH9173632.1;transl_table=11 DALFDA020000025.1 tpg gene 25307 25663 . + . ID=gene-O5C65_003585;Name=O5C65_003585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003585 DALFDA020000025.1 Protein Homology CDS 25307 25663 . + 0 ID=cds-HJH9173633.1;Parent=gene-O5C65_003585;Dbxref=NCBI_GP:HJH9173633.1;Name=HJH9173633.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463116.1;locus_tag=O5C65_003585;product=MmcQ/YjbR family DNA-binding protein;protein_id=HJH9173633.1;transl_table=11 DALFDA020000025.1 tpg gene 25664 26002 . - . ID=gene-O5C65_003586;Name=O5C65_003586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003586 DALFDA020000025.1 Protein Homology CDS 25664 26002 . - 0 ID=cds-HJH9173634.1;Parent=gene-O5C65_003586;Dbxref=NCBI_GP:HJH9173634.1;Name=HJH9173634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463117.1;locus_tag=O5C65_003586;product=hypothetical protein;protein_id=HJH9173634.1;transl_table=11 DALFDA020000025.1 tpg gene 25989 26444 . - . ID=gene-O5C65_003587;Name=O5C65_003587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003587 DALFDA020000025.1 Protein Homology CDS 25989 26444 . - 0 ID=cds-HJH9173635.1;Parent=gene-O5C65_003587;Dbxref=NCBI_GP:HJH9173635.1;Name=HJH9173635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463118.1;locus_tag=O5C65_003587;product=hypothetical protein;protein_id=HJH9173635.1;transl_table=11 DALFDA020000025.1 tpg gene 26576 29401 . - . ID=gene-O5C65_003588;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=O5C65_003588 DALFDA020000025.1 Protein Homology CDS 26576 29401 . - 0 ID=cds-HJH9173636.1;Parent=gene-O5C65_003588;Dbxref=NCBI_GP:HJH9173636.1;Name=HJH9173636.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463119.1;locus_tag=O5C65_003588;product=excinuclease ABC subunit UvrA;protein_id=HJH9173636.1;transl_table=11 DALFDA020000025.1 tpg gene 29649 30179 . + . ID=gene-O5C65_003589;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=O5C65_003589 DALFDA020000025.1 Protein Homology CDS 29649 30179 . + 0 ID=cds-HJH9173637.1;Parent=gene-O5C65_003589;Dbxref=NCBI_GP:HJH9173637.1;Name=HJH9173637.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463121.1;locus_tag=O5C65_003589;product=single-stranded DNA-binding protein SSB1;protein_id=HJH9173637.1;transl_table=11 DALFDA020000025.1 tpg gene 31219 31851 . + . ID=gene-O5C65_003590;Name=siiA;gbkey=Gene;gene=siiA;gene_biotype=protein_coding;locus_tag=O5C65_003590 DALFDA020000025.1 Protein Homology CDS 31219 31851 . + 0 ID=cds-HJH9173638.1;Parent=gene-O5C65_003590;Dbxref=NCBI_GP:HJH9173638.1;Name=HJH9173638.1;gbkey=CDS;gene=siiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463122.1;locus_tag=O5C65_003590;product=SPI-4 type I secretion system auxiliary protein SiiA;protein_id=HJH9173638.1;transl_table=11 DALFDA020000025.1 tpg gene 31848 33236 . + . ID=gene-O5C65_003591;Name=O5C65_003591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003591 DALFDA020000025.1 Protein Homology CDS 31848 33236 . + 0 ID=cds-HJH9173639.1;Parent=gene-O5C65_003591;Dbxref=NCBI_GP:HJH9173639.1;Name=HJH9173639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463123.1;locus_tag=O5C65_003591;product=MotA/TolQ/ExbB proton channel family protein;protein_id=HJH9173639.1;transl_table=11 DALFDA020000025.1 tpg gene 33226 34545 . + . ID=gene-O5C65_003592;Name=siiC;gbkey=Gene;gene=siiC;gene_biotype=protein_coding;locus_tag=O5C65_003592 DALFDA020000025.1 Protein Homology CDS 33226 34545 . + 0 ID=cds-HJH9173640.1;Parent=gene-O5C65_003592;Dbxref=NCBI_GP:HJH9173640.1;Name=HJH9173640.1;gbkey=CDS;gene=siiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463124.1;locus_tag=O5C65_003592;product=SPI-4 type I secretion system protein SiiC;protein_id=HJH9173640.1;transl_table=11 DALFDA020000025.1 tpg gene 34542 35819 . + . ID=gene-O5C65_003593;Name=siiD;gbkey=Gene;gene=siiD;gene_biotype=protein_coding;locus_tag=O5C65_003593 DALFDA020000025.1 Protein Homology CDS 34542 35819 . + 0 ID=cds-HJH9173641.1;Parent=gene-O5C65_003593;Dbxref=NCBI_GP:HJH9173641.1;Name=HJH9173641.1;gbkey=CDS;gene=siiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463125.1;locus_tag=O5C65_003593;product=SPI-4 type I secretion system protein SiiD;protein_id=HJH9173641.1;transl_table=11 DALFDA020000025.1 tpg gene 35836 53442 . + . ID=gene-O5C65_003594;Name=O5C65_003594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003594 DALFDA020000025.1 Protein Homology CDS 35836 53442 . + 0 ID=cds-HJH9173642.1;Parent=gene-O5C65_003594;Dbxref=NCBI_GP:HJH9173642.1;Name=HJH9173642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=O5C65_003594;product=Ig-like domain-containing protein;protein_id=HJH9173642.1;transl_table=11 DALFDA020000025.1 tpg gene 53482 55548 . + . ID=gene-O5C65_003595;Name=siiF;gbkey=Gene;gene=siiF;gene_biotype=protein_coding;locus_tag=O5C65_003595 DALFDA020000025.1 Protein Homology CDS 53482 55548 . + 0 ID=cds-HJH9173643.1;Parent=gene-O5C65_003595;Dbxref=NCBI_GP:HJH9173643.1;Name=HJH9173643.1;gbkey=CDS;gene=siiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463127.1;locus_tag=O5C65_003595;product=SPI-4 type I secretion system protein SiiF;protein_id=HJH9173643.1;transl_table=11 DALFDA020000025.1 tpg gene 55826 56107 . - . ID=gene-O5C65_003596;Name=O5C65_003596;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003596 DALFDA020000025.1 Protein Homology CDS 55826 56107 . - 0 ID=cds-HJH9173644.1;Parent=gene-O5C65_003596;Dbxref=NCBI_GP:HJH9173644.1;Name=HJH9173644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463128.1;locus_tag=O5C65_003596;product=YjcB family protein;protein_id=HJH9173644.1;transl_table=11 DALFDA020000025.1 tpg gene 56670 58271 . + . ID=gene-O5C65_003597;Name=O5C65_003597;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003597 DALFDA020000025.1 Protein Homology CDS 56670 58271 . + 0 ID=cds-HJH9173645.1;Parent=gene-O5C65_003597;Dbxref=NCBI_GP:HJH9173645.1;Name=HJH9173645.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463129.1;locus_tag=O5C65_003597;product=EAL domain-containing protein;protein_id=HJH9173645.1;transl_table=11 DALFDA020000025.1 tpg gene 58259 58582 . - . ID=gene-O5C65_003598;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=O5C65_003598 DALFDA020000025.1 Protein Homology CDS 58259 58582 . - 0 ID=cds-HJH9173646.1;Parent=gene-O5C65_003598;Dbxref=NCBI_GP:HJH9173646.1;Name=HJH9173646.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463130.1;locus_tag=O5C65_003598;product=superoxide response transcriptional regulator SoxS;protein_id=HJH9173646.1;transl_table=11 DALFDA020000025.1 tpg gene 58669 59127 . + . ID=gene-O5C65_003599;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=O5C65_003599 DALFDA020000025.1 Protein Homology CDS 58669 59127 . + 0 ID=cds-HJH9173647.1;Parent=gene-O5C65_003599;Dbxref=NCBI_GP:HJH9173647.1;Name=HJH9173647.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463131.1;locus_tag=O5C65_003599;product=redox-sensitive transcriptional activator SoxR;protein_id=HJH9173647.1;transl_table=11 DALFDA020000025.1 tpg gene 59420 60088 . + . ID=gene-O5C65_003600;Name=O5C65_003600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003600 DALFDA020000025.1 Protein Homology CDS 59420 60088 . + 0 ID=cds-HJH9173648.1;Parent=gene-O5C65_003600;Dbxref=NCBI_GP:HJH9173648.1;Name=HJH9173648.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463132.1;locus_tag=O5C65_003600;product=glutathione S-transferase family protein;protein_id=HJH9173648.1;transl_table=11 DALFDA020000025.1 tpg gene 60435 61784 . + . ID=gene-O5C65_003601;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=protein_coding;gene_synonym=yjcD;locus_tag=O5C65_003601 DALFDA020000025.1 Protein Homology CDS 60435 61784 . + 0 ID=cds-HJH9173649.1;Parent=gene-O5C65_003601;Dbxref=NCBI_GP:HJH9173649.1;Name=HJH9173649.1;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=O5C65_003601;product=guanine/hypoxanthine transporter GhxP;protein_id=HJH9173649.1;transl_table=11 DALFDA020000025.1 tpg gene 61934 63580 . + . ID=gene-O5C65_003602;Name=O5C65_003602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003602 DALFDA020000025.1 Protein Homology CDS 61934 63580 . + 0 ID=cds-HJH9173650.1;Parent=gene-O5C65_003602;Dbxref=NCBI_GP:HJH9173650.1;Name=HJH9173650.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463134.1;locus_tag=O5C65_003602;product=Na+/H+ antiporter;protein_id=HJH9173650.1;transl_table=11 DALFDA020000025.1 tpg gene 63675 64562 . - . ID=gene-O5C65_003603;Name=O5C65_003603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003603 DALFDA020000025.1 Protein Homology CDS 63675 64562 . - 0 ID=cds-HJH9173651.1;Parent=gene-O5C65_003603;Dbxref=NCBI_GP:HJH9173651.1;Name=HJH9173651.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463135.1;locus_tag=O5C65_003603;product=LysR family transcriptional regulator;protein_id=HJH9173651.1;transl_table=11 DALFDA020000025.1 tpg gene 64666 65076 . + . ID=gene-O5C65_003604;Name=O5C65_003604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003604 DALFDA020000025.1 Protein Homology CDS 64666 65076 . + 0 ID=cds-HJH9173652.1;Parent=gene-O5C65_003604;Dbxref=NCBI_GP:HJH9173652.1;Name=HJH9173652.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463136.1;locus_tag=O5C65_003604;product=CidA/LrgA family protein;protein_id=HJH9173652.1;transl_table=11 DALFDA020000025.1 tpg gene 65069 65758 . + . ID=gene-O5C65_003605;Name=O5C65_003605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003605 DALFDA020000025.1 Protein Homology CDS 65069 65758 . + 0 ID=cds-HJH9173653.1;Parent=gene-O5C65_003605;Dbxref=NCBI_GP:HJH9173653.1;Name=HJH9173653.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463137.1;locus_tag=O5C65_003605;product=LrgB family protein;protein_id=HJH9173653.1;transl_table=11 DALFDA020000025.1 tpg gene 65797 67446 . - . ID=gene-O5C65_003606;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=O5C65_003606 DALFDA020000025.1 Protein Homology CDS 65797 67446 . - 0 ID=cds-HJH9173654.1;Parent=gene-O5C65_003606;Dbxref=NCBI_GP:HJH9173654.1;Name=HJH9173654.1;Ontology_term=GO:0006814,GO:0015123,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=acetate transmembrane transporter activity|0015123||IEA,solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463138.1;locus_tag=O5C65_003606;product=cation/acetate symporter ActP;protein_id=HJH9173654.1;transl_table=11 DALFDA020000025.1 tpg gene 67443 67757 . - . ID=gene-O5C65_003607;Name=O5C65_003607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003607 DALFDA020000025.1 Protein Homology CDS 67443 67757 . - 0 ID=cds-HJH9173655.1;Parent=gene-O5C65_003607;Dbxref=NCBI_GP:HJH9173655.1;Name=HJH9173655.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463139.1;locus_tag=O5C65_003607;product=DUF485 domain-containing protein;protein_id=HJH9173655.1;transl_table=11 DALFDA020000025.1 tpg gene 67996 69954 . - . ID=gene-O5C65_003608;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=O5C65_003608 DALFDA020000025.1 Protein Homology CDS 67996 69954 . - 0 ID=cds-HJH9173656.1;Parent=gene-O5C65_003608;Dbxref=NCBI_GP:HJH9173656.1;Name=HJH9173656.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463140.1;locus_tag=O5C65_003608;product=acetate--CoA ligase;protein_id=HJH9173656.1;transl_table=11 DALFDA020000025.1 tpg gene 70386 71822 . + . ID=gene-O5C65_003609;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=O5C65_003609 DALFDA020000025.1 Protein Homology CDS 70386 71822 . + 0 ID=cds-HJH9173657.1;Parent=gene-O5C65_003609;Dbxref=NCBI_GP:HJH9173657.1;Name=HJH9173657.1;Ontology_term=GO:0008152,GO:0005509,GO:0020037,GO:0042279,GO:0042597;gbkey=CDS;gene=nrfA;go_component=periplasmic space|0042597||IEA;go_function=calcium ion binding|0005509||IEA,heme binding|0020037||IEA,nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463142.1;locus_tag=O5C65_003609;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=HJH9173657.1;transl_table=11 DALFDA020000025.1 tpg gene 71934 72500 . + . ID=gene-O5C65_003610;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=O5C65_003610 DALFDA020000025.1 Protein Homology CDS 71934 72500 . + 0 ID=cds-HJH9173658.1;Parent=gene-O5C65_003610;Dbxref=NCBI_GP:HJH9173658.1;Name=HJH9173658.1;Ontology_term=GO:0008152,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=O5C65_003610;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=HJH9173658.1;transl_table=11 DALFDA020000025.1 tpg gene 72497 73168 . + . ID=gene-O5C65_003611;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=O5C65_003611 DALFDA020000025.1 Protein Homology CDS 72497 73168 . + 0 ID=cds-HJH9173659.1;Parent=gene-O5C65_003611;Dbxref=NCBI_GP:HJH9173659.1;Name=HJH9173659.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463144.1;locus_tag=O5C65_003611;product=cytochrome c nitrite reductase Fe-S protein;protein_id=HJH9173659.1;transl_table=11 DALFDA020000025.1 tpg gene 73165 74121 . + . ID=gene-O5C65_003612;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=O5C65_003612 DALFDA020000025.1 Protein Homology CDS 73165 74121 . + 0 ID=cds-HJH9173660.1;Parent=gene-O5C65_003612;Dbxref=NCBI_GP:HJH9173660.1;Name=HJH9173660.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463145.1;locus_tag=O5C65_003612;product=cytochrome c nitrite reductase subunit NrfD;protein_id=HJH9173660.1;transl_table=11 DALFDA020000025.1 tpg gene 74114 76336 . + . ID=gene-O5C65_003613;Name=nrfEF;gbkey=Gene;gene=nrfEF;gene_biotype=protein_coding;locus_tag=O5C65_003613 DALFDA020000025.1 Protein Homology CDS 74114 76336 . + 0 ID=cds-HJH9173661.1;Parent=gene-O5C65_003613;Dbxref=NCBI_GP:HJH9173661.1;Name=HJH9173661.1;gbkey=CDS;gene=nrfEF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=O5C65_003613;product=heme lyase NrfEFG subunit NrfEF;protein_id=HJH9173661.1;transl_table=11 DALFDA020000025.1 tpg gene 76333 76953 . + . ID=gene-O5C65_003614;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=O5C65_003614 DALFDA020000025.1 Protein Homology CDS 76333 76953 . + 0 ID=cds-HJH9173662.1;Parent=gene-O5C65_003614;Dbxref=NCBI_GP:HJH9173662.1;Name=HJH9173662.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463147.1;locus_tag=O5C65_003614;product=heme lyase NrfEFG subunit NrfG;protein_id=HJH9173662.1;transl_table=11 DALFDA020000025.1 tpg gene 77298 78608 . + . ID=gene-O5C65_003615;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=O5C65_003615 DALFDA020000025.1 Protein Homology CDS 77298 78608 . + 0 ID=cds-HJH9173663.1;Parent=gene-O5C65_003615;Dbxref=NCBI_GP:HJH9173663.1;Name=HJH9173663.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463148.1;locus_tag=O5C65_003615;product=glutamate/aspartate:proton symporter GltP;protein_id=HJH9173663.1;transl_table=11 DALFDA020000025.1 tpg gene 78766 79455 . - . ID=gene-O5C65_003616;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=O5C65_003616 DALFDA020000025.1 Protein Homology CDS 78766 79455 . - 0 ID=cds-HJH9173664.1;Parent=gene-O5C65_003616;Dbxref=NCBI_GP:HJH9173664.1;Name=HJH9173664.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463149.1;locus_tag=O5C65_003616;product=Sel1 family TPR-like repeat protein YjcO;protein_id=HJH9173664.1;transl_table=11 DALFDA020000025.1 tpg gene 79632 81779 . - . ID=gene-O5C65_003617;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=O5C65_003617 DALFDA020000025.1 Protein Homology CDS 79632 81779 . - 0 ID=cds-HJH9173665.1;Parent=gene-O5C65_003617;Dbxref=NCBI_GP:HJH9173665.1;Name=HJH9173665.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463150.1;locus_tag=O5C65_003617;product=formate dehydrogenase subunit alpha;protein_id=HJH9173665.1;transl_except=(pos:complement(81360..81362)%2Caa:Sec);transl_table=11 DALFDA020000025.1 tpg gene 82134 83042 . - . ID=gene-O5C65_003618;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=O5C65_003618 DALFDA020000025.1 Protein Homology CDS 82134 83042 . - 0 ID=cds-HJH9173666.1;Parent=gene-O5C65_003618;Dbxref=NCBI_GP:HJH9173666.1;Name=HJH9173666.1;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463151.1;locus_tag=O5C65_003618;product=lipid A hydroxylase LpxO;protein_id=HJH9173666.1;transl_table=11 DALFDA020000025.1 tpg gene 83300 83734 . - . ID=gene-O5C65_003619;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=O5C65_003619 DALFDA020000025.1 Protein Homology CDS 83300 83734 . - 0 ID=cds-HJH9173667.1;Parent=gene-O5C65_003619;Dbxref=NCBI_GP:HJH9173667.1;Name=HJH9173667.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=O5C65_003619;product=aminoalkylphosphonate N-acetyltransferase;protein_id=HJH9173667.1;transl_table=11 DALFDA020000025.1 tpg gene 83886 84329 . - . ID=gene-O5C65_003620;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=O5C65_003620 DALFDA020000025.1 Protein Homology CDS 83886 84329 . - 0 ID=cds-HJH9173668.1;Parent=gene-O5C65_003620;Dbxref=NCBI_GP:HJH9173668.1;Name=HJH9173668.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463153.1;locus_tag=O5C65_003620;product=VOC family metalloprotein YjdN;protein_id=HJH9173668.1;transl_table=11 DALFDA020000025.1 tpg gene 84449 84784 . - . ID=gene-O5C65_003621;Name=O5C65_003621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003621 DALFDA020000025.1 Protein Homology CDS 84449 84784 . - 0 ID=cds-HJH9173669.1;Parent=gene-O5C65_003621;Dbxref=NCBI_GP:HJH9173669.1;Name=HJH9173669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463154.1;locus_tag=O5C65_003621;product=zinc ribbon domain-containing protein YjdM;protein_id=HJH9173669.1;transl_table=11 DALFDA020000025.1 tpg gene 85252 86754 . + . ID=gene-O5C65_003622;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=O5C65_003622 DALFDA020000025.1 Protein Homology CDS 85252 86754 . + 0 ID=cds-HJH9173670.1;Parent=gene-O5C65_003622;Dbxref=NCBI_GP:HJH9173670.1;Name=HJH9173670.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463155.1;locus_tag=O5C65_003622;product=glycine betaine/L-proline transporter ProP;protein_id=HJH9173670.1;transl_table=11 DALFDA020000025.1 tpg gene 86824 86913 . + . ID=gene-O5C65_003623;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=O5C65_003623 DALFDA020000025.1 Protein Homology CDS 86824 86913 . + 0 ID=cds-HJH9173671.1;Parent=gene-O5C65_003623;Dbxref=NCBI_GP:HJH9173671.1;Name=HJH9173671.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844399.1;locus_tag=O5C65_003623;product=LpxT activity modulator PmrR;protein_id=HJH9173671.1;transl_table=11 DALFDA020000025.1 tpg gene 86921 87991 . - . ID=gene-O5C65_003624;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=O5C65_003624 DALFDA020000025.1 Protein Homology CDS 86921 87991 . - 0 ID=cds-HJH9173672.1;Parent=gene-O5C65_003624;Dbxref=NCBI_GP:HJH9173672.1;Name=HJH9173672.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463156.1;locus_tag=O5C65_003624;product=two-component system sensor histidine kinase PmrB;protein_id=HJH9173672.1;transl_table=11 DALFDA020000025.1 tpg gene 88001 88669 . - . ID=gene-O5C65_003625;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=O5C65_003625 DALFDA020000025.1 Protein Homology CDS 88001 88669 . - 0 ID=cds-HJH9173673.1;Parent=gene-O5C65_003625;Dbxref=NCBI_GP:HJH9173673.1;Name=HJH9173673.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463157.1;locus_tag=O5C65_003625;product=two-component system response regulator PmrA;protein_id=HJH9173673.1;transl_table=11 DALFDA020000025.1 tpg gene 88666 90309 . - . ID=gene-O5C65_003626;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=O5C65_003626 DALFDA020000025.1 Protein Homology CDS 88666 90309 . - 0 ID=cds-HJH9173674.1;Parent=gene-O5C65_003626;Dbxref=NCBI_GP:HJH9173674.1;Name=HJH9173674.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463158.1;locus_tag=O5C65_003626;product=phosphoethanolamine transferase EptA;protein_id=HJH9173674.1;transl_table=11 DALFDA020000025.1 tpg gene 90443 91780 . - . ID=gene-O5C65_003627;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=O5C65_003627 DALFDA020000025.1 Protein Homology CDS 90443 91780 . - 0 ID=cds-HJH9173675.1;Parent=gene-O5C65_003627;Dbxref=NCBI_GP:HJH9173675.1;Name=HJH9173675.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463159.1;locus_tag=O5C65_003627;product=arginine/agmatine antiporter;protein_id=HJH9173675.1;transl_table=11 DALFDA020000025.1 tpg gene 91920 92681 . - . ID=gene-O5C65_003628;Name=O5C65_003628;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003628 DALFDA020000025.1 Protein Homology CDS 91920 92681 . - 0 ID=cds-HJH9173676.1;Parent=gene-O5C65_003628;Dbxref=NCBI_GP:HJH9173676.1;Name=HJH9173676.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463160.1;locus_tag=O5C65_003628;product=AraC family transcriptional regulator;protein_id=HJH9173676.1;transl_table=11 ##sequence-region DALFDA020000026.1 1 91818 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000026.1 tpg region 1 91818 . + . ID=DALFDA020000026.1:1..91818;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000026.1 tpg gene 21 566 . - . ID=gene-O5C65_003629;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=O5C65_003629 DALFDA020000026.1 Protein Homology CDS 21 566 . - 0 ID=cds-HJH9173677.1;Parent=gene-O5C65_003629;Dbxref=NCBI_GP:HJH9173677.1;Name=HJH9173677.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462872.1;locus_tag=O5C65_003629;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=HJH9173677.1;transl_table=11 DALFDA020000026.1 tpg gene 578 2029 . - . ID=gene-O5C65_003630;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=O5C65_003630 DALFDA020000026.1 Protein Homology CDS 578 2029 . - 0 ID=cds-HJH9173678.1;Parent=gene-O5C65_003630;Dbxref=NCBI_GP:HJH9173678.1;Name=HJH9173678.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=O5C65_003630;product=Trk system potassium transporter TrkH;protein_id=HJH9173678.1;transl_table=11 DALFDA020000026.1 tpg gene 2068 2682 . - . ID=gene-O5C65_003631;Name=O5C65_003631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003631 DALFDA020000026.1 Protein Homology CDS 2068 2682 . - 0 ID=cds-HJH9173679.1;Parent=gene-O5C65_003631;Dbxref=NCBI_GP:HJH9173679.1;Name=HJH9173679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462870.1;locus_tag=O5C65_003631;product=IMPACT family protein;protein_id=HJH9173679.1;transl_table=11 DALFDA020000026.1 tpg gene 2682 4013 . - . ID=gene-O5C65_003632;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=O5C65_003632 DALFDA020000026.1 Protein Homology CDS 2682 4013 . - 0 ID=cds-HJH9173680.1;Parent=gene-O5C65_003632;Dbxref=NCBI_GP:HJH9173680.1;Name=HJH9173680.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=O5C65_003632;product=Xaa-Pro dipeptidase;protein_id=HJH9173680.1;transl_table=11 DALFDA020000026.1 tpg gene 4203 6392 . + . ID=gene-O5C65_003633;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=O5C65_003633 DALFDA020000026.1 Protein Homology CDS 4203 6392 . + 0 ID=cds-HJH9173681.1;Parent=gene-O5C65_003633;Dbxref=NCBI_GP:HJH9173681.1;Name=HJH9173681.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692,GO:0036125;gbkey=CDS;gene=fadB;go_component=fatty acid beta-oxidation multienzyme complex|0036125||IEA;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462868.1;locus_tag=O5C65_003633;product=fatty acid oxidation complex subunit alpha FadB;protein_id=HJH9173681.1;transl_table=11 DALFDA020000026.1 tpg gene 6402 7565 . + . ID=gene-O5C65_003634;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=O5C65_003634 DALFDA020000026.1 Protein Homology CDS 6402 7565 . + 0 ID=cds-HJH9173682.1;Parent=gene-O5C65_003634;Dbxref=NCBI_GP:HJH9173682.1;Name=HJH9173682.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadA;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462867.1;locus_tag=O5C65_003634;product=acetyl-CoA C-acyltransferase FadA;protein_id=HJH9173682.1;transl_table=11 DALFDA020000026.1 tpg gene 7762 9585 . - . ID=gene-O5C65_003635;Name=O5C65_003635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003635 DALFDA020000026.1 Protein Homology CDS 7762 9585 . - 0 ID=cds-HJH9173683.1;Parent=gene-O5C65_003635;Dbxref=NCBI_GP:HJH9173683.1;Name=HJH9173683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669888.1;locus_tag=O5C65_003635;product=aryl-sulfate sulfotransferase;protein_id=HJH9173683.1;transl_table=11 DALFDA020000026.1 tpg gene 9839 10540 . - . ID=gene-O5C65_003636;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=O5C65_003636 DALFDA020000026.1 Protein Homology CDS 9839 10540 . - 0 ID=cds-HJH9173684.1;Parent=gene-O5C65_003636;Dbxref=NCBI_GP:HJH9173684.1;Name=HJH9173684.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462864.1;locus_tag=O5C65_003636;product=NAD(P)H-flavin reductase;protein_id=HJH9173684.1;transl_table=11 DALFDA020000026.1 tpg gene 10626 12104 . - . ID=gene-O5C65_003637;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=O5C65_003637 DALFDA020000026.1 Protein Homology CDS 10626 12104 . - 0 ID=cds-HJH9173685.1;Parent=gene-O5C65_003637;Dbxref=NCBI_GP:HJH9173685.1;Name=HJH9173685.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462863.1;locus_tag=O5C65_003637;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=HJH9173685.1;transl_table=11 DALFDA020000026.1 tpg gene 12290 12778 . + . ID=gene-O5C65_003638;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=O5C65_003638 DALFDA020000026.1 Protein Homology CDS 12290 12778 . + 0 ID=cds-HJH9173686.1;Parent=gene-O5C65_003638;Dbxref=NCBI_GP:HJH9173686.1;Name=HJH9173686.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462862.1;locus_tag=O5C65_003638;product=transcription/translation regulatory transformer protein RfaH;protein_id=HJH9173686.1;transl_table=11 DALFDA020000026.1 tpg gene 12786 13568 . - . ID=gene-O5C65_003639;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=O5C65_003639 DALFDA020000026.1 Protein Homology CDS 12786 13568 . - 0 ID=cds-HJH9173687.1;Parent=gene-O5C65_003639;Dbxref=NCBI_GP:HJH9173687.1;Name=HJH9173687.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462861.3;locus_tag=O5C65_003639;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=HJH9173687.1;transl_table=11 DALFDA020000026.1 tpg gene 13610 14389 . - . ID=gene-O5C65_003640;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=O5C65_003640 DALFDA020000026.1 Protein Homology CDS 13610 14389 . - 0 ID=cds-HJH9173688.1;Parent=gene-O5C65_003640;Dbxref=NCBI_GP:HJH9173688.1;Name=HJH9173688.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462860.1;locus_tag=O5C65_003640;product=Sec-independent protein translocase subunit TatC;protein_id=HJH9173688.1;transl_table=11 DALFDA020000026.1 tpg gene 14392 14940 . - . ID=gene-O5C65_003641;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=O5C65_003641 DALFDA020000026.1 Protein Homology CDS 14392 14940 . - 0 ID=cds-HJH9173689.1;Parent=gene-O5C65_003641;Dbxref=NCBI_GP:HJH9173689.1;Name=HJH9173689.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462859.1;locus_tag=O5C65_003641;product=Sec-independent protein translocase protein TatB;protein_id=HJH9173689.1;transl_table=11 DALFDA020000026.1 tpg gene 14944 15198 . - . ID=gene-O5C65_003642;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=O5C65_003642 DALFDA020000026.1 Protein Homology CDS 14944 15198 . - 0 ID=cds-HJH9173690.1;Parent=gene-O5C65_003642;Dbxref=NCBI_GP:HJH9173690.1;Name=HJH9173690.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462858.1;locus_tag=O5C65_003642;product=Sec-independent protein translocase subunit TatA;protein_id=HJH9173690.1;transl_table=11 DALFDA020000026.1 tpg gene 15404 17044 . - . ID=gene-O5C65_003643;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=O5C65_003643 DALFDA020000026.1 Protein Homology CDS 15404 17044 . - 0 ID=cds-HJH9173691.1;Parent=gene-O5C65_003643;Dbxref=NCBI_GP:HJH9173691.1;Name=HJH9173691.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462857.1;locus_tag=O5C65_003643;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=HJH9173691.1;transl_table=11 DALFDA020000026.1 tpg gene 17041 17646 . - . ID=gene-O5C65_003644;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=O5C65_003644 DALFDA020000026.1 Protein Homology CDS 17041 17646 . - 0 ID=cds-HJH9173692.1;Parent=gene-O5C65_003644;Dbxref=NCBI_GP:HJH9173692.1;Name=HJH9173692.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiJ;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462856.1;locus_tag=O5C65_003644;product=ubiquinone biosynthesis protein UbiJ;protein_id=HJH9173692.1;transl_table=11 DALFDA020000026.1 tpg gene 17656 18411 . - . ID=gene-O5C65_003645;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=O5C65_003645 DALFDA020000026.1 Protein Homology CDS 17656 18411 . - 0 ID=cds-HJH9173693.1;Parent=gene-O5C65_003645;Dbxref=NCBI_GP:HJH9173693.1;Name=HJH9173693.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462855.1;locus_tag=O5C65_003645;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=HJH9173693.1;transl_table=11 DALFDA020000026.1 tpg gene 18507 19937 . - . ID=gene-O5C65_003646;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=O5C65_003646 DALFDA020000026.1 Protein Homology CDS 18507 19937 . - 0 ID=cds-HJH9173694.1;Parent=gene-O5C65_003646;Dbxref=NCBI_GP:HJH9173694.1;Name=HJH9173694.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462854.1;locus_tag=O5C65_003646;product=DNA recombination protein RmuC;protein_id=HJH9173694.1;transl_table=11 DALFDA020000026.1 tpg gene 20077 20838 . - . ID=gene-O5C65_003647;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=O5C65_003647 DALFDA020000026.1 Protein Homology CDS 20077 20838 . - 0 ID=cds-HJH9173695.1;Parent=gene-O5C65_003647;Dbxref=NCBI_GP:HJH9173695.1;Name=HJH9173695.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462853.1;locus_tag=O5C65_003647;product=uridine phosphorylase;protein_id=HJH9173695.1;transl_table=11 DALFDA020000026.1 tpg gene 21097 21909 . + . ID=gene-O5C65_003648;Name=O5C65_003648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003648 DALFDA020000026.1 Protein Homology CDS 21097 21909 . + 0 ID=cds-HJH9173696.1;Parent=gene-O5C65_003648;Dbxref=NCBI_GP:HJH9173696.1;Name=HJH9173696.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001343535.1;locus_tag=O5C65_003648;product=dienelactone hydrolase family protein;protein_id=HJH9173696.1;transl_table=11 DALFDA020000026.1 tpg gene 21989 23332 . - . ID=gene-O5C65_003649;Name=O5C65_003649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003649 DALFDA020000026.1 Protein Homology CDS 21989 23332 . - 0 ID=cds-HJH9173697.1;Parent=gene-O5C65_003649;Dbxref=NCBI_GP:HJH9173697.1;Name=HJH9173697.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462851.1;locus_tag=O5C65_003649;product=anaerobic sulfatase maturase;protein_id=HJH9173697.1;transl_table=11 DALFDA020000026.1 tpg gene 23676 25940 . - . ID=gene-O5C65_003650;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=O5C65_003650 DALFDA020000026.1 Protein Homology CDS 23676 25940 . - 0 ID=cds-HJH9173698.1;Parent=gene-O5C65_003650;Dbxref=NCBI_GP:HJH9173698.1;Name=HJH9173698.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462850.1;locus_tag=O5C65_003650;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=HJH9173698.1;transl_table=11 DALFDA020000026.1 tpg gene 26189 27142 . + . ID=gene-O5C65_003651;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=O5C65_003651 DALFDA020000026.1 Protein Homology CDS 26189 27142 . + 0 ID=cds-HJH9173699.1;Parent=gene-O5C65_003651;Dbxref=NCBI_GP:HJH9173699.1;Name=HJH9173699.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462849.1;locus_tag=O5C65_003651;product=HTH-type transcriptional regulator MetR;protein_id=HJH9173699.1;transl_table=11 DALFDA020000026.1 tpg gene 27030 27929 . - . ID=gene-O5C65_003652;Name=O5C65_003652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003652 DALFDA020000026.1 Protein Homology CDS 27030 27929 . - 0 ID=cds-HJH9173700.1;Parent=gene-O5C65_003652;Dbxref=NCBI_GP:HJH9173700.1;Name=HJH9173700.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462848.1;locus_tag=O5C65_003652;product=carboxylate/amino acid/amine transporter;protein_id=HJH9173700.1;transl_table=11 DALFDA020000026.1 tpg gene 28010 28810 . - . ID=gene-O5C65_003653;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=O5C65_003653 DALFDA020000026.1 Protein Homology CDS 28010 28810 . - 0 ID=cds-HJH9173701.1;Parent=gene-O5C65_003653;Dbxref=NCBI_GP:HJH9173701.1;Name=HJH9173701.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462847.1;locus_tag=O5C65_003653;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=HJH9173701.1;transl_table=11 DALFDA020000026.1 tpg gene 28826 29842 . - . ID=gene-O5C65_003654;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=O5C65_003654 DALFDA020000026.1 Protein Homology CDS 28826 29842 . - 0 ID=cds-HJH9173702.1;Parent=gene-O5C65_003654;Dbxref=NCBI_GP:HJH9173702.1;Name=HJH9173702.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462846.1;locus_tag=O5C65_003654;product=lysophospholipase L2;protein_id=HJH9173702.1;transl_table=11 DALFDA020000026.1 tpg gene 29953 30573 . + . ID=gene-O5C65_003655;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=O5C65_003655 DALFDA020000026.1 Protein Homology CDS 29953 30573 . + 0 ID=cds-HJH9173703.1;Parent=gene-O5C65_003655;Dbxref=NCBI_GP:HJH9173703.1;Name=HJH9173703.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462845.1;locus_tag=O5C65_003655;product=homoserine/homoserine lactone efflux protein;protein_id=HJH9173703.1;transl_table=11 DALFDA020000026.1 tpg gene 30613 31233 . - . ID=gene-O5C65_003656;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=O5C65_003656 DALFDA020000026.1 Protein Homology CDS 30613 31233 . - 0 ID=cds-HJH9173704.1;Parent=gene-O5C65_003656;Dbxref=NCBI_GP:HJH9173704.1;Name=HJH9173704.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462844.1;locus_tag=O5C65_003656;product=threonine export protein RhtC;protein_id=HJH9173704.1;transl_table=11 DALFDA020000026.1 tpg gene 31297 33126 . - . ID=gene-O5C65_003657;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=O5C65_003657 DALFDA020000026.1 Protein Homology CDS 31297 33126 . - 0 ID=cds-HJH9173705.1;Parent=gene-O5C65_003657;Dbxref=NCBI_GP:HJH9173705.1;Name=HJH9173705.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=O5C65_003657;product=ATP-dependent DNA helicase RecQ;protein_id=HJH9173705.1;transl_table=11 DALFDA020000026.1 tpg gene 33210 34079 . - . ID=gene-O5C65_003658;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=O5C65_003658 DALFDA020000026.1 Protein Homology CDS 33210 34079 . - 0 ID=cds-HJH9173706.1;Parent=gene-O5C65_003658;Dbxref=NCBI_GP:HJH9173706.1;Name=HJH9173706.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462842.1;locus_tag=O5C65_003658;product=phospholipase A;protein_id=HJH9173706.1;transl_table=11 DALFDA020000026.1 tpg gene 34244 34711 . + . ID=gene-O5C65_003659;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=O5C65_003659 DALFDA020000026.1 Protein Homology CDS 34244 34711 . + 0 ID=cds-HJH9173707.1;Parent=gene-O5C65_003659;Dbxref=NCBI_GP:HJH9173707.1;Name=HJH9173707.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=O5C65_003659;product=acyl-CoA thioesterase YigI;protein_id=HJH9173707.1;transl_table=11 DALFDA020000026.1 tpg gene 34755 35639 . + . ID=gene-O5C65_003660;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=O5C65_003660 DALFDA020000026.1 Protein Homology CDS 34755 35639 . + 0 ID=cds-HJH9173708.1;Parent=gene-O5C65_003660;Dbxref=NCBI_GP:HJH9173708.1;Name=HJH9173708.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462840.1;locus_tag=O5C65_003660;product=EamA family transporter RarD;protein_id=HJH9173708.1;transl_table=11 DALFDA020000026.1 tpg gene 35674 36132 . + . ID=gene-O5C65_003661;Name=O5C65_003661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003661 DALFDA020000026.1 Protein Homology CDS 35674 36132 . + 0 ID=cds-HJH9173709.1;Parent=gene-O5C65_003661;Dbxref=NCBI_GP:HJH9173709.1;Name=HJH9173709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462839.1;locus_tag=O5C65_003661;product=hypothetical protein;protein_id=HJH9173709.1;transl_table=11 DALFDA020000026.1 tpg gene 36148 36528 . + . ID=gene-O5C65_003662;Name=yigF;gbkey=Gene;gene=yigF;gene_biotype=protein_coding;locus_tag=O5C65_003662 DALFDA020000026.1 Protein Homology CDS 36148 36528 . + 0 ID=cds-HJH9173710.1;Parent=gene-O5C65_003662;Dbxref=NCBI_GP:HJH9173710.1;Name=HJH9173710.1;gbkey=CDS;gene=yigF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462838.1;locus_tag=O5C65_003662;product=inner membrane protein YigF;protein_id=HJH9173710.1;transl_table=11 DALFDA020000026.1 tpg gene 36577 37527 . - . ID=gene-O5C65_003663;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=O5C65_003663 DALFDA020000026.1 Protein Homology CDS 36577 37527 . - 0 ID=cds-HJH9173711.1;Parent=gene-O5C65_003663;Dbxref=NCBI_GP:HJH9173711.1;Name=HJH9173711.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=O5C65_003663;product=magnesium/cobalt transporter CorA;protein_id=HJH9173711.1;transl_table=11 DALFDA020000026.1 tpg gene 37683 37739 . - . ID=gene-O5C65_003664;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=O5C65_003664 DALFDA020000026.1 Protein Homology CDS 37683 37739 . - 0 ID=cds-HJH9173712.1;Parent=gene-O5C65_003664;Dbxref=NCBI_GP:HJH9173712.1;Name=HJH9173712.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=O5C65_003664;product=protein YsgD;protein_id=HJH9173712.1;transl_table=11 DALFDA020000026.1 tpg gene 37999 40161 . - . ID=gene-O5C65_003665;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=O5C65_003665 DALFDA020000026.1 Protein Homology CDS 37999 40161 . - 0 ID=cds-HJH9173713.1;Parent=gene-O5C65_003665;Dbxref=NCBI_GP:HJH9173713.1;Name=HJH9173713.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462836.1;locus_tag=O5C65_003665;product=DNA helicase II;protein_id=HJH9173713.1;transl_table=11 DALFDA020000026.1 tpg gene 40296 41012 . - . ID=gene-O5C65_003666;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=O5C65_003666 DALFDA020000026.1 Protein Homology CDS 40296 41012 . - 0 ID=cds-HJH9173714.1;Parent=gene-O5C65_003666;Dbxref=NCBI_GP:HJH9173714.1;Name=HJH9173714.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462835.1;locus_tag=O5C65_003666;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=HJH9173714.1;transl_table=11 DALFDA020000026.1 tpg gene 41012 41914 . - . ID=gene-O5C65_003667;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=O5C65_003667 DALFDA020000026.1 Protein Homology CDS 41012 41914 . - 0 ID=cds-HJH9173715.1;Parent=gene-O5C65_003667;Dbxref=NCBI_GP:HJH9173715.1;Name=HJH9173715.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462834.1;locus_tag=O5C65_003667;product=tyrosine recombinase XerC;protein_id=HJH9173715.1;transl_table=11 DALFDA020000026.1 tpg gene 41911 42618 . - . ID=gene-O5C65_003668;Name=O5C65_003668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003668 DALFDA020000026.1 Protein Homology CDS 41911 42618 . - 0 ID=cds-HJH9173716.1;Parent=gene-O5C65_003668;Dbxref=NCBI_GP:HJH9173716.1;Name=HJH9173716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462833.1;locus_tag=O5C65_003668;product=DUF484 domain-containing protein;protein_id=HJH9173716.1;transl_table=11 DALFDA020000026.1 tpg gene 42615 43439 . - . ID=gene-O5C65_003669;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=O5C65_003669 DALFDA020000026.1 Protein Homology CDS 42615 43439 . - 0 ID=cds-HJH9173717.1;Parent=gene-O5C65_003669;Dbxref=NCBI_GP:HJH9173717.1;Name=HJH9173717.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=O5C65_003669;product=diaminopimelate epimerase;protein_id=HJH9173717.1;transl_table=11 DALFDA020000026.1 tpg gene 43476 43679 . - . ID=gene-O5C65_003670;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=O5C65_003670 DALFDA020000026.1 Protein Homology CDS 43476 43679 . - 0 ID=cds-HJH9173718.1;Parent=gene-O5C65_003670;Dbxref=NCBI_GP:HJH9173718.1;Name=HJH9173718.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462831.1;locus_tag=O5C65_003670;product=LPS translocon maturation chaperone LptM;protein_id=HJH9173718.1;transl_table=11 DALFDA020000026.1 tpg gene 43865 45868 . + . ID=gene-O5C65_003671;Name=O5C65_003671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003671 DALFDA020000026.1 Protein Homology CDS 43865 45868 . + 0 ID=cds-HJH9173719.1;Parent=gene-O5C65_003671;Dbxref=NCBI_GP:HJH9173719.1;Name=HJH9173719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200018.1;locus_tag=O5C65_003671;product=hypothetical protein;protein_id=HJH9173719.1;transl_table=11 DALFDA020000026.1 tpg gene 45856 46245 . + . ID=gene-O5C65_003672;Name=O5C65_003672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003672 DALFDA020000026.1 Protein Homology CDS 45856 46245 . + 0 ID=cds-HJH9173720.1;Parent=gene-O5C65_003672;Dbxref=NCBI_GP:HJH9173720.1;Name=HJH9173720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462830.1;locus_tag=O5C65_003672;product=DUF3021 family protein;protein_id=HJH9173720.1;transl_table=11 DALFDA020000026.1 tpg gene 46315 46635 . + . ID=gene-O5C65_003673;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=O5C65_003673 DALFDA020000026.1 Protein Homology CDS 46315 46635 . + 0 ID=cds-HJH9173721.1;Parent=gene-O5C65_003673;Dbxref=NCBI_GP:HJH9173721.1;Name=HJH9173721.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=O5C65_003673;product=iron donor protein CyaY;protein_id=HJH9173721.1;transl_table=11 DALFDA020000026.1 tpg gene 46706 47068 . - . ID=gene-O5C65_003674;Name=O5C65_003674;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003674 DALFDA020000026.1 Protein Homology CDS 46706 47068 . - 0 ID=cds-HJH9173722.1;Parent=gene-O5C65_003674;Dbxref=NCBI_GP:HJH9173722.1;Name=HJH9173722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462828.1;locus_tag=O5C65_003674;product=hypothetical protein;protein_id=HJH9173722.1;transl_table=11 DALFDA020000026.1 tpg gene 47080 47622 . - . ID=gene-O5C65_003675;Name=O5C65_003675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003675 DALFDA020000026.1 Protein Homology CDS 47080 47622 . - 0 ID=cds-HJH9173723.1;Parent=gene-O5C65_003675;Dbxref=NCBI_GP:HJH9173723.1;Name=HJH9173723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462827.1;locus_tag=O5C65_003675;product=STM3941 family protein;protein_id=HJH9173723.1;transl_table=11 DALFDA020000026.1 tpg gene 47808 48161 . - . ID=gene-O5C65_003676;Name=O5C65_003676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003676 DALFDA020000026.1 Protein Homology CDS 47808 48161 . - 0 ID=cds-HJH9173724.1;Parent=gene-O5C65_003676;Dbxref=NCBI_GP:HJH9173724.1;Name=HJH9173724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462826.1;locus_tag=O5C65_003676;product=hypothetical protein;protein_id=HJH9173724.1;transl_table=11 DALFDA020000026.1 tpg gene 48269 50815 . - . ID=gene-O5C65_003677;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=O5C65_003677 DALFDA020000026.1 Protein Homology CDS 48269 50815 . - 0 ID=cds-HJH9173725.1;Parent=gene-O5C65_003677;Dbxref=NCBI_GP:HJH9173725.1;Name=HJH9173725.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462825.1;locus_tag=O5C65_003677;product=class I adenylate cyclase;protein_id=HJH9173725.1;transl_table=11 DALFDA020000026.1 tpg gene 51192 52133 . + . ID=gene-O5C65_003678;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=O5C65_003678 DALFDA020000026.1 Protein Homology CDS 51192 52133 . + 0 ID=cds-HJH9173726.1;Parent=gene-O5C65_003678;Dbxref=NCBI_GP:HJH9173726.1;Name=HJH9173726.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=O5C65_003678;product=hydroxymethylbilane synthase;protein_id=HJH9173726.1;transl_table=11 DALFDA020000026.1 tpg gene 52130 52870 . + . ID=gene-O5C65_003679;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=O5C65_003679 DALFDA020000026.1 Protein Homology CDS 52130 52870 . + 0 ID=cds-HJH9173727.1;Parent=gene-O5C65_003679;Dbxref=NCBI_GP:HJH9173727.1;Name=HJH9173727.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462823.1;locus_tag=O5C65_003679;product=uroporphyrinogen-III synthase;protein_id=HJH9173727.1;transl_table=11 DALFDA020000026.1 tpg gene 52892 54061 . + . ID=gene-O5C65_003680;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=O5C65_003680 DALFDA020000026.1 Protein Homology CDS 52892 54061 . + 0 ID=cds-HJH9173728.1;Parent=gene-O5C65_003680;Dbxref=NCBI_GP:HJH9173728.1;Name=HJH9173728.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462822.1;locus_tag=O5C65_003680;product=uroporphyrinogen-III C-methyltransferase;protein_id=HJH9173728.1;transl_table=11 DALFDA020000026.1 tpg gene 54064 55260 . + . ID=gene-O5C65_003681;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=O5C65_003681 DALFDA020000026.1 Protein Homology CDS 54064 55260 . + 0 ID=cds-HJH9173729.1;Parent=gene-O5C65_003681;Dbxref=NCBI_GP:HJH9173729.1;Name=HJH9173729.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=O5C65_003681;product=protoheme IX biogenesis protein HemY;protein_id=HJH9173729.1;transl_table=11 DALFDA020000026.1 tpg gene 55841 55917 . - . ID=gene-O5C65_003682;Name=O5C65_003682;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_003682 DALFDA020000026.1 tRNAscan-SE tRNA 55841 55917 . - . ID=rna-O5C65_003682;Parent=gene-O5C65_003682;anticodon=(pos:complement(55881..55883));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003682;product=tRNA-Pro DALFDA020000026.1 tRNAscan-SE exon 55841 55917 . - . ID=exon-O5C65_003682-1;Parent=rna-O5C65_003682;anticodon=(pos:complement(55881..55883));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003682;product=tRNA-Pro DALFDA020000026.1 tpg gene 55960 56046 . - . ID=gene-O5C65_003683;Name=O5C65_003683;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_003683 DALFDA020000026.1 tRNAscan-SE tRNA 55960 56046 . - . ID=rna-O5C65_003683;Parent=gene-O5C65_003683;anticodon=(pos:complement(56010..56012));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003683;product=tRNA-Leu DALFDA020000026.1 tRNAscan-SE exon 55960 56046 . - . ID=exon-O5C65_003683-1;Parent=rna-O5C65_003683;anticodon=(pos:complement(56010..56012));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003683;product=tRNA-Leu DALFDA020000026.1 tpg gene 56067 56142 . - . ID=gene-O5C65_003684;Name=O5C65_003684;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_003684 DALFDA020000026.1 tRNAscan-SE tRNA 56067 56142 . - . ID=rna-O5C65_003684;Parent=gene-O5C65_003684;anticodon=(pos:complement(56107..56109));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003684;product=tRNA-His DALFDA020000026.1 tRNAscan-SE exon 56067 56142 . - . ID=exon-O5C65_003684-1;Parent=rna-O5C65_003684;anticodon=(pos:complement(56107..56109));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003684;product=tRNA-His DALFDA020000026.1 tpg gene 56197 56273 . - . ID=gene-O5C65_003685;Name=O5C65_003685;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_003685 DALFDA020000026.1 tRNAscan-SE tRNA 56197 56273 . - . ID=rna-O5C65_003685;Parent=gene-O5C65_003685;anticodon=(pos:complement(56237..56239));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003685;product=tRNA-Arg DALFDA020000026.1 tRNAscan-SE exon 56197 56273 . - . ID=exon-O5C65_003685-1;Parent=rna-O5C65_003685;anticodon=(pos:complement(56237..56239));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003685;product=tRNA-Arg DALFDA020000026.1 tpg gene 56376 57761 . - . ID=gene-O5C65_003686;Name=thrP;gbkey=Gene;gene=thrP;gene_biotype=protein_coding;gene_synonym=yifK;locus_tag=O5C65_003686 DALFDA020000026.1 Protein Homology CDS 56376 57761 . - 0 ID=cds-HJH9173730.1;Parent=gene-O5C65_003686;Dbxref=NCBI_GP:HJH9173730.1;Name=HJH9173730.1;Ontology_term=GO:0015194,GO:0015195;gbkey=CDS;gene=thrP;go_function=L-serine transmembrane transporter activity|0015194||IEA,L-threonine transmembrane transporter activity|0015195||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462820.1;locus_tag=O5C65_003686;product=bifunctional threonine/serine APC transporter ThrP;protein_id=HJH9173730.1;transl_table=11 DALFDA020000026.1 tpg gene 57968 58708 . - . ID=gene-O5C65_003687;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=O5C65_003687 DALFDA020000026.1 Protein Homology CDS 57968 58708 . - 0 ID=cds-HJH9173731.1;Parent=gene-O5C65_003687;Dbxref=NCBI_GP:HJH9173731.1;Name=HJH9173731.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462819.1;locus_tag=O5C65_003687;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=HJH9173731.1;transl_table=11 DALFDA020000026.1 tpg gene 58705 60063 . - . ID=gene-O5C65_003688;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=O5C65_003688 DALFDA020000026.1 Protein Homology CDS 58705 60063 . - 0 ID=cds-HJH9173732.1;Parent=gene-O5C65_003688;Dbxref=NCBI_GP:HJH9173732.1;Name=HJH9173732.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462818.1;locus_tag=O5C65_003688;product=ECA oligosaccharide polymerase;protein_id=HJH9173732.1;transl_table=11 DALFDA020000026.1 tpg gene 60060 61139 . - . ID=gene-O5C65_003689;Name=O5C65_003689;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003689 DALFDA020000026.1 Protein Homology CDS 60060 61139 . - 0 ID=cds-HJH9173733.1;Parent=gene-O5C65_003689;Dbxref=NCBI_GP:HJH9173733.1;Name=HJH9173733.1;Ontology_term=GO:0036065,GO:0008417;gbkey=CDS;go_function=fucosyltransferase activity|0008417||IEA;go_process=fucosylation|0036065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462817.1;locus_tag=O5C65_003689;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=HJH9173733.1;transl_table=11 DALFDA020000026.1 tpg gene 61136 62386 . - . ID=gene-O5C65_003690;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=O5C65_003690 DALFDA020000026.1 Protein Homology CDS 61136 62386 . - 0 ID=cds-HJH9173734.1;Parent=gene-O5C65_003690;Dbxref=NCBI_GP:HJH9173734.1;Name=HJH9173734.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462816.1;locus_tag=O5C65_003690;product=lipid III flippase WzxE;protein_id=HJH9173734.1;transl_table=11 DALFDA020000026.1 tpg gene 62388 63518 . - . ID=gene-O5C65_003691;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=O5C65_003691 DALFDA020000026.1 Protein Homology CDS 62388 63518 . - 0 ID=cds-HJH9173735.1;Parent=gene-O5C65_003691;Dbxref=NCBI_GP:HJH9173735.1;Name=HJH9173735.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462815.1;locus_tag=O5C65_003691;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=HJH9173735.1;transl_table=11 DALFDA020000026.1 tpg gene 63523 64200 . - . ID=gene-O5C65_003692;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=O5C65_003692 DALFDA020000026.1 Protein Homology CDS 63523 64200 . - 0 ID=cds-HJH9173736.1;Parent=gene-O5C65_003692;Dbxref=NCBI_GP:HJH9173736.1;Name=HJH9173736.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=O5C65_003692;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=HJH9173736.1;transl_table=11 DALFDA020000026.1 tpg gene 64178 64492 . - . ID=gene-O5C65_003693;Name=O5C65_003693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003693 DALFDA020000026.1 Protein Homology CDS 64178 64492 . - 0 ID=cds-HJH9173737.1;Parent=gene-O5C65_003693;Dbxref=NCBI_GP:HJH9173737.1;Name=HJH9173737.1;Ontology_term=GO:0009058,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=O5C65_003693;product=sugar phosphate nucleotidyltransferase;protein_id=HJH9173737.1;transl_table=11 DALFDA020000026.1 tpg gene 64435 65502 . - . ID=gene-O5C65_003694;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=O5C65_003694 DALFDA020000026.1 Protein Homology CDS 64435 65502 . - 0 ID=cds-HJH9173738.1;Parent=gene-O5C65_003694;Dbxref=NCBI_GP:HJH9173738.1;Name=HJH9173738.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462812.1;locus_tag=O5C65_003694;product=dTDP-glucose 4%2C6-dehydratase;protein_id=HJH9173738.1;transl_table=11 DALFDA020000026.1 tpg gene 65502 66764 . - . ID=gene-O5C65_003695;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=O5C65_003695 DALFDA020000026.1 Protein Homology CDS 65502 66764 . - 0 ID=cds-HJH9173739.1;Parent=gene-O5C65_003695;Dbxref=NCBI_GP:HJH9173739.1;Name=HJH9173739.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462811.1;locus_tag=O5C65_003695;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=HJH9173739.1;transl_table=11 DALFDA020000026.1 tpg gene 66761 67891 . - . ID=gene-O5C65_003696;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=O5C65_003696 DALFDA020000026.1 Protein Homology CDS 66761 67891 . - 0 ID=cds-HJH9173740.1;Parent=gene-O5C65_003696;Dbxref=NCBI_GP:HJH9173740.1;Name=HJH9173740.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462810.1;locus_tag=O5C65_003696;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=HJH9173740.1;transl_table=11 DALFDA020000026.1 tpg gene 67947 68993 . - . ID=gene-O5C65_003697;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=O5C65_003697 DALFDA020000026.1 Protein Homology CDS 67947 68993 . - 0 ID=cds-HJH9173741.1;Parent=gene-O5C65_003697;Dbxref=NCBI_GP:HJH9173741.1;Name=HJH9173741.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462809.1;locus_tag=O5C65_003697;product=ECA polysaccharide chain length modulation protein;protein_id=HJH9173741.1;transl_table=11 DALFDA020000026.1 tpg gene 69005 70108 . - . ID=gene-O5C65_003698;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=O5C65_003698 DALFDA020000026.1 Protein Homology CDS 69005 70108 . - 0 ID=cds-HJH9173742.1;Parent=gene-O5C65_003698;Dbxref=NCBI_GP:HJH9173742.1;Name=HJH9173742.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462808.1;locus_tag=O5C65_003698;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=HJH9173742.1;transl_table=11 DALFDA020000026.1 tpg gene 70338 71597 . - . ID=gene-O5C65_003699;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=O5C65_003699 DALFDA020000026.1 Protein Homology CDS 70338 71597 . - 0 ID=cds-HJH9173743.1;Parent=gene-O5C65_003699;Dbxref=NCBI_GP:HJH9173743.1;Name=HJH9173743.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=O5C65_003699;product=transcription termination factor Rho;protein_id=HJH9173743.1;transl_table=11 DALFDA020000026.1 tpg gene 71685 71768 . - . ID=gene-O5C65_003700;Name=O5C65_003700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003700 DALFDA020000026.1 Protein Homology CDS 71685 71768 . - 0 ID=cds-HJH9173744.1;Parent=gene-O5C65_003700;Dbxref=NCBI_GP:HJH9173744.1;Name=HJH9173744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=O5C65_003700;product=rho operon leader peptide;protein_id=HJH9173744.1;transl_table=11 DALFDA020000026.1 tpg gene 72016 72345 . - . ID=gene-O5C65_003701;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=O5C65_003701 DALFDA020000026.1 Protein Homology CDS 72016 72345 . - 0 ID=cds-HJH9173745.1;Parent=gene-O5C65_003701;Dbxref=NCBI_GP:HJH9173745.1;Name=HJH9173745.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=O5C65_003701;product=thioredoxin TrxA;protein_id=HJH9173745.1;transl_table=11 DALFDA020000026.1 tpg gene 72489 73754 . + . ID=gene-O5C65_003702;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=O5C65_003702 DALFDA020000026.1 Protein Homology CDS 72489 73754 . + 0 ID=cds-HJH9173746.1;Parent=gene-O5C65_003702;Dbxref=NCBI_GP:HJH9173746.1;Name=HJH9173746.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462805.1;locus_tag=O5C65_003702;product=ATP-dependent RNA helicase RhlB;protein_id=HJH9173746.1;transl_table=11 DALFDA020000026.1 tpg gene 73873 75354 . + . ID=gene-O5C65_003703;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=O5C65_003703 DALFDA020000026.1 Protein Homology CDS 73873 75354 . + 0 ID=cds-HJH9173747.1;Parent=gene-O5C65_003703;Dbxref=NCBI_GP:HJH9173747.1;Name=HJH9173747.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462804.1;locus_tag=O5C65_003703;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=HJH9173747.1;transl_table=11 DALFDA020000026.1 tpg gene 75394 77418 . - . ID=gene-O5C65_003704;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=O5C65_003704 DALFDA020000026.1 Protein Homology CDS 75394 77418 . - 0 ID=cds-HJH9173748.1;Parent=gene-O5C65_003704;Dbxref=NCBI_GP:HJH9173748.1;Name=HJH9173748.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462803.1;locus_tag=O5C65_003704;product=DNA helicase Rep;protein_id=HJH9173748.1;transl_table=11 DALFDA020000026.1 tpg pseudogene 77518 77655 . - . ID=gene-O5C65_003705;Name=O5C65_003705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_003705;pseudo=true DALFDA020000026.1 Protein Homology CDS 77518 77655 . - 0 ID=cds-O5C65_003705;Parent=gene-O5C65_003705;Note=involved in nicotinamide riboside transport%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506088.1;locus_tag=O5C65_003705;product=nicotinamide riboside transporter PnuC;pseudo=true;transl_table=11 DALFDA020000026.1 tpg pseudogene 77607 77762 . - . ID=gene-O5C65_003706;Name=O5C65_003706;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_003706;pseudo=true DALFDA020000026.1 Protein Homology CDS 77607 77762 . - 0 ID=cds-O5C65_003706;Parent=gene-O5C65_003706;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442089.1;locus_tag=O5C65_003706;product=Crp/Fnr family transcriptional regulator;pseudo=true;transl_table=11 DALFDA020000026.1 tpg gene 77956 78237 . + . ID=gene-O5C65_003707;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=O5C65_003707 DALFDA020000026.1 Protein Homology CDS 77956 78237 . + 0 ID=cds-HJH9173749.1;Parent=gene-O5C65_003707;Dbxref=NCBI_GP:HJH9173749.1;Name=HJH9173749.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462801.1;locus_tag=O5C65_003707;product=peptidylprolyl isomerase PpiC;protein_id=HJH9173749.1;transl_table=11 DALFDA020000026.1 tpg gene 78329 79804 . - . ID=gene-O5C65_003708;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=O5C65_003708 DALFDA020000026.1 Protein Homology CDS 78329 79804 . - 0 ID=cds-HJH9173750.1;Parent=gene-O5C65_003708;Dbxref=NCBI_GP:HJH9173750.1;Name=HJH9173750.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=O5C65_003708;product=ketol-acid reductoisomerase;protein_id=HJH9173750.1;transl_table=11 DALFDA020000026.1 tpg gene 79969 80856 . + . ID=gene-O5C65_003709;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=O5C65_003709 DALFDA020000026.1 Protein Homology CDS 79969 80856 . + 0 ID=cds-HJH9173751.1;Parent=gene-O5C65_003709;Dbxref=NCBI_GP:HJH9173751.1;Name=HJH9173751.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462799.1;locus_tag=O5C65_003709;product=HTH-type transcriptional activator IlvY;protein_id=HJH9173751.1;transl_table=11 DALFDA020000026.1 tpg gene 80859 81200 . - . ID=gene-O5C65_003710;Name=O5C65_003710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003710 DALFDA020000026.1 Protein Homology CDS 80859 81200 . - 0 ID=cds-HJH9173752.1;Parent=gene-O5C65_003710;Dbxref=NCBI_GP:HJH9173752.1;Name=HJH9173752.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462798.1;locus_tag=O5C65_003710;product=helix-turn-helix domain-containing protein;protein_id=HJH9173752.1;transl_table=11 DALFDA020000026.1 tpg gene 81197 81514 . - . ID=gene-O5C65_003711;Name=O5C65_003711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003711 DALFDA020000026.1 Protein Homology CDS 81197 81514 . - 0 ID=cds-HJH9173753.1;Parent=gene-O5C65_003711;Dbxref=NCBI_GP:HJH9173753.1;Name=HJH9173753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462797.1;locus_tag=O5C65_003711;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=HJH9173753.1;transl_table=11 DALFDA020000026.1 tpg gene 81797 83341 . - . ID=gene-O5C65_003712;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=O5C65_003712 DALFDA020000026.1 Protein Homology CDS 81797 83341 . - 0 ID=cds-HJH9173754.1;Parent=gene-O5C65_003712;Dbxref=NCBI_GP:HJH9173754.1;Name=HJH9173754.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462796.1;locus_tag=O5C65_003712;product=threonine ammonia-lyase%2C biosynthetic;protein_id=HJH9173754.1;transl_table=11 DALFDA020000026.1 tpg gene 83344 85194 . - . ID=gene-O5C65_003713;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=O5C65_003713 DALFDA020000026.1 Protein Homology CDS 83344 85194 . - 0 ID=cds-HJH9173755.1;Parent=gene-O5C65_003713;Dbxref=NCBI_GP:HJH9173755.1;Name=HJH9173755.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=O5C65_003713;product=dihydroxy-acid dehydratase;protein_id=HJH9173755.1;transl_table=11 DALFDA020000026.1 tpg gene 85354 86283 . - . ID=gene-O5C65_003714;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=O5C65_003714 DALFDA020000026.1 Protein Homology CDS 85354 86283 . - 0 ID=cds-HJH9173756.1;Parent=gene-O5C65_003714;Dbxref=NCBI_GP:HJH9173756.1;Name=HJH9173756.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462794.1;locus_tag=O5C65_003714;product=branched-chain-amino-acid transaminase;protein_id=HJH9173756.1;transl_table=11 DALFDA020000026.1 tpg gene 86301 86564 . - . ID=gene-O5C65_003715;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=O5C65_003715 DALFDA020000026.1 Protein Homology CDS 86301 86564 . - 0 ID=cds-HJH9173757.1;Parent=gene-O5C65_003715;Dbxref=NCBI_GP:HJH9173757.1;Name=HJH9173757.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=O5C65_003715;product=acetolactate synthase 2 small subunit;protein_id=HJH9173757.1;transl_table=11 DALFDA020000026.1 tpg gene 86561 88207 . - . ID=gene-O5C65_003716;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=O5C65_003716 DALFDA020000026.1 Protein Homology CDS 86561 88207 . - 0 ID=cds-HJH9173758.1;Parent=gene-O5C65_003716;Dbxref=NCBI_GP:HJH9173758.1;Name=HJH9173758.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=O5C65_003716;product=acetolactate synthase 2 catalytic subunit;protein_id=HJH9173758.1;transl_table=11 DALFDA020000026.1 tpg gene 88210 88260 . - . ID=gene-O5C65_003717;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=O5C65_003717 DALFDA020000026.1 Protein Homology CDS 88210 88260 . - 0 ID=cds-HJH9173759.1;Parent=gene-O5C65_003717;Dbxref=NCBI_GP:HJH9173759.1;Name=HJH9173759.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: protein motif:HMM:NF038286.1;locus_tag=O5C65_003717;product=peptide IlvX;protein_id=HJH9173759.1;transl_table=11 DALFDA020000026.1 tpg gene 88347 88445 . - . ID=gene-O5C65_003718;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=O5C65_003718 DALFDA020000026.1 Protein Homology CDS 88347 88445 . - 0 ID=cds-HJH9173760.1;Parent=gene-O5C65_003718;Dbxref=NCBI_GP:HJH9173760.1;Name=HJH9173760.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=O5C65_003718;product=ilv operon leader peptide;protein_id=HJH9173760.1;transl_table=11 DALFDA020000026.1 tpg gene 88797 90317 . + . ID=gene-O5C65_003719;Name=O5C65_003719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003719 DALFDA020000026.1 Protein Homology CDS 88797 90317 . + 0 ID=cds-HJH9173761.1;Parent=gene-O5C65_003719;Dbxref=NCBI_GP:HJH9173761.1;Name=HJH9173761.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=O5C65_003719;product=YifB family Mg chelatase-like AAA ATPase;protein_id=HJH9173761.1;transl_table=11 DALFDA020000026.1 tpg gene 90342 90680 . - . ID=gene-O5C65_003720;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=O5C65_003720 DALFDA020000026.1 Protein Homology CDS 90342 90680 . - 0 ID=cds-HJH9173762.1;Parent=gene-O5C65_003720;Dbxref=NCBI_GP:HJH9173762.1;Name=HJH9173762.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462789.1;locus_tag=O5C65_003720;product=macrodomain Ori organization protein MaoP;protein_id=HJH9173762.1;transl_table=11 DALFDA020000026.1 tpg gene 90787 91635 . + . ID=gene-O5C65_003721;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=O5C65_003721 DALFDA020000026.1 Protein Homology CDS 90787 91635 . + 0 ID=cds-HJH9173763.1;Parent=gene-O5C65_003721;Dbxref=NCBI_GP:HJH9173763.1;Name=HJH9173763.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462788.3;locus_tag=O5C65_003721;product=HTH-type transcriptional regulator HdfR;protein_id=HJH9173763.1;transl_table=11 DALFDA020000026.1 tpg gene 91737 91812 . - . ID=gene-O5C65_003722;Name=O5C65_003722;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_003722 DALFDA020000026.1 tRNAscan-SE tRNA 91737 91812 . - . ID=rna-O5C65_003722;Parent=gene-O5C65_003722;anticodon=(pos:complement(91777..91779));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003722;product=tRNA-Trp DALFDA020000026.1 tRNAscan-SE exon 91737 91812 . - . ID=exon-O5C65_003722-1;Parent=rna-O5C65_003722;anticodon=(pos:complement(91777..91779));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003722;product=tRNA-Trp ##sequence-region DALFDA020000027.1 1 91524 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000027.1 tpg region 1 91524 . + . ID=DALFDA020000027.1:1..91524;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000027.1 tpg gene 213 800 . + . ID=gene-O5C65_003723;Name=O5C65_003723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003723 DALFDA020000027.1 Protein Homology CDS 213 800 . + 0 ID=cds-HJH9173764.1;Parent=gene-O5C65_003723;Dbxref=NCBI_GP:HJH9173764.1;Name=HJH9173764.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466162.1;locus_tag=O5C65_003723;product=fimbrial protein;protein_id=HJH9173764.1;transl_table=11 DALFDA020000027.1 tpg gene 883 3579 . + . ID=gene-O5C65_003724;Name=O5C65_003724;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003724 DALFDA020000027.1 Protein Homology CDS 883 3579 . + 0 ID=cds-HJH9173765.1;Parent=gene-O5C65_003724;Dbxref=NCBI_GP:HJH9173765.1;Name=HJH9173765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000981797.1;locus_tag=O5C65_003724;product=fimbrial biogenesis outer membrane usher protein;protein_id=HJH9173765.1;transl_table=11 DALFDA020000027.1 tpg gene 3592 4365 . + . ID=gene-O5C65_003725;Name=O5C65_003725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003725 DALFDA020000027.1 Protein Homology CDS 3592 4365 . + 0 ID=cds-HJH9173766.1;Parent=gene-O5C65_003725;Dbxref=NCBI_GP:HJH9173766.1;Name=HJH9173766.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044456.1;locus_tag=O5C65_003725;product=fimbria/pilus periplasmic chaperone;protein_id=HJH9173766.1;transl_table=11 DALFDA020000027.1 tpg gene 4385 4891 . + . ID=gene-O5C65_003726;Name=O5C65_003726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003726 DALFDA020000027.1 Protein Homology CDS 4385 4891 . + 0 ID=cds-HJH9173767.1;Parent=gene-O5C65_003726;Dbxref=NCBI_GP:HJH9173767.1;Name=HJH9173767.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178262.1;locus_tag=O5C65_003726;product=fimbrial protein;protein_id=HJH9173767.1;transl_table=11 DALFDA020000027.1 tpg gene 4906 5376 . + . ID=gene-O5C65_003727;Name=O5C65_003727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003727 DALFDA020000027.1 Protein Homology CDS 4906 5376 . + 0 ID=cds-HJH9173768.1;Parent=gene-O5C65_003727;Dbxref=NCBI_GP:HJH9173768.1;Name=HJH9173768.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006667202.1;locus_tag=O5C65_003727;product=fimbrial protein;protein_id=HJH9173768.1;transl_table=11 DALFDA020000027.1 tpg gene 5373 5909 . + . ID=gene-O5C65_003728;Name=O5C65_003728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003728 DALFDA020000027.1 Protein Homology CDS 5373 5909 . + 0 ID=cds-HJH9173769.1;Parent=gene-O5C65_003728;Dbxref=NCBI_GP:HJH9173769.1;Name=HJH9173769.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001079648.1;locus_tag=O5C65_003728;product=fimbrial protein;protein_id=HJH9173769.1;transl_table=11 DALFDA020000027.1 tpg gene 6039 7031 . + . ID=gene-O5C65_003729;Name=O5C65_003729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003729 DALFDA020000027.1 GeneMarkS-2+ CDS 6039 7031 . + 0 ID=cds-HJH9173770.1;Parent=gene-O5C65_003729;Dbxref=NCBI_GP:HJH9173770.1;Name=HJH9173770.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_003729;product=hypothetical protein;protein_id=HJH9173770.1;transl_table=11 DALFDA020000027.1 tpg gene 7478 7774 . - . ID=gene-O5C65_003730;Name=O5C65_003730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003730 DALFDA020000027.1 Protein Homology CDS 7478 7774 . - 0 ID=cds-HJH9173771.1;Parent=gene-O5C65_003730;Dbxref=NCBI_GP:HJH9173771.1;Name=HJH9173771.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001532579.1;locus_tag=O5C65_003730;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=HJH9173771.1;transl_table=11 DALFDA020000027.1 tpg gene 7740 8096 . - . ID=gene-O5C65_003731;Name=O5C65_003731;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003731 DALFDA020000027.1 Protein Homology CDS 7740 8096 . - 0 ID=cds-HJH9173772.1;Parent=gene-O5C65_003731;Dbxref=NCBI_GP:HJH9173772.1;Name=HJH9173772.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461876.3;locus_tag=O5C65_003731;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=HJH9173772.1;transl_table=11 DALFDA020000027.1 tpg gene 8180 10414 . - . ID=gene-O5C65_003732;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=O5C65_003732 DALFDA020000027.1 Protein Homology CDS 8180 10414 . - 0 ID=cds-HJH9173773.1;Parent=gene-O5C65_003732;Dbxref=NCBI_GP:HJH9173773.1;Name=HJH9173773.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461877.1;locus_tag=O5C65_003732;product=GTP diphosphokinase;protein_id=HJH9173773.1;transl_table=11 DALFDA020000027.1 tpg gene 10466 11761 . - . ID=gene-O5C65_003733;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=O5C65_003733 DALFDA020000027.1 Protein Homology CDS 10466 11761 . - 0 ID=cds-HJH9173774.1;Parent=gene-O5C65_003733;Dbxref=NCBI_GP:HJH9173774.1;Name=HJH9173774.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461878.1;locus_tag=O5C65_003733;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=HJH9173774.1;transl_table=11 DALFDA020000027.1 tpg gene 11819 14575 . + . ID=gene-O5C65_003734;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=O5C65_003734 DALFDA020000027.1 Protein Homology CDS 11819 14575 . + 0 ID=cds-HJH9173775.1;Parent=gene-O5C65_003734;Dbxref=NCBI_GP:HJH9173775.1;Name=HJH9173775.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461879.1;locus_tag=O5C65_003734;product=two-component sensor histidine kinase BarA;protein_id=HJH9173775.1;transl_table=11 DALFDA020000027.1 tpg gene 14619 15761 . - . ID=gene-O5C65_003735;Name=O5C65_003735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003735 DALFDA020000027.1 Protein Homology CDS 14619 15761 . - 0 ID=cds-HJH9173776.1;Parent=gene-O5C65_003735;Dbxref=NCBI_GP:HJH9173776.1;Name=HJH9173776.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461880.1;locus_tag=O5C65_003735;product=glycerate kinase;protein_id=HJH9173776.1;transl_table=11 DALFDA020000027.1 tpg gene 15839 17179 . - . ID=gene-O5C65_003736;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=O5C65_003736 DALFDA020000027.1 Protein Homology CDS 15839 17179 . - 0 ID=cds-HJH9173777.1;Parent=gene-O5C65_003736;Dbxref=NCBI_GP:HJH9173777.1;Name=HJH9173777.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=O5C65_003736;product=glucarate dehydratase;protein_id=HJH9173777.1;transl_table=11 DALFDA020000027.1 tpg gene 17200 18540 . - . ID=gene-O5C65_003737;Name=O5C65_003737;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003737 DALFDA020000027.1 Protein Homology CDS 17200 18540 . - 0 ID=cds-HJH9173778.1;Parent=gene-O5C65_003737;Dbxref=NCBI_GP:HJH9173778.1;Name=HJH9173778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461882.1;locus_tag=O5C65_003737;product=enolase C-terminal domain-like protein;protein_id=HJH9173778.1;transl_table=11 DALFDA020000027.1 tpg gene 18537 19895 . - . ID=gene-O5C65_003738;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=O5C65_003738 DALFDA020000027.1 Protein Homology CDS 18537 19895 . - 0 ID=cds-HJH9173779.1;Parent=gene-O5C65_003738;Dbxref=NCBI_GP:HJH9173779.1;Name=HJH9173779.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461883.1;locus_tag=O5C65_003738;product=galactarate/glucarate/glycerate transporter GudP;protein_id=HJH9173779.1;transl_table=11 DALFDA020000027.1 tpg gene 19975 20226 . + . ID=gene-O5C65_003739;Name=O5C65_003739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003739 DALFDA020000027.1 GeneMarkS-2+ CDS 19975 20226 . + 0 ID=cds-HJH9173780.1;Parent=gene-O5C65_003739;Dbxref=NCBI_GP:HJH9173780.1;Name=HJH9173780.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_003739;product=hypothetical protein;protein_id=HJH9173780.1;transl_table=11 DALFDA020000027.1 tpg gene 20376 20825 . - . ID=gene-O5C65_003740;Name=O5C65_003740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003740 DALFDA020000027.1 Protein Homology CDS 20376 20825 . - 0 ID=cds-HJH9173781.1;Parent=gene-O5C65_003740;Dbxref=NCBI_GP:HJH9173781.1;Name=HJH9173781.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461884.1;locus_tag=O5C65_003740;product=flavodoxin;protein_id=HJH9173781.1;transl_table=11 DALFDA020000027.1 tpg gene 20844 21626 . - . ID=gene-O5C65_003741;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=O5C65_003741 DALFDA020000027.1 Protein Homology CDS 20844 21626 . - 0 ID=cds-HJH9173782.1;Parent=gene-O5C65_003741;Dbxref=NCBI_GP:HJH9173782.1;Name=HJH9173782.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001715016.1;locus_tag=O5C65_003741;product=tRNA pseudouridine(65) synthase TruC;protein_id=HJH9173782.1;transl_table=11 DALFDA020000027.1 tpg gene 21626 21955 . - . ID=gene-O5C65_003742;Name=O5C65_003742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003742 DALFDA020000027.1 Protein Homology CDS 21626 21955 . - 0 ID=cds-HJH9173783.1;Parent=gene-O5C65_003742;Dbxref=NCBI_GP:HJH9173783.1;Name=HJH9173783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461886.1;locus_tag=O5C65_003742;product=YqcC family protein;protein_id=HJH9173783.1;transl_table=11 DALFDA020000027.1 tpg gene 22567 23112 . - . ID=gene-O5C65_003743;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=O5C65_003743 DALFDA020000027.1 Protein Homology CDS 22567 23112 . - 0 ID=cds-HJH9173784.1;Parent=gene-O5C65_003743;Dbxref=NCBI_GP:HJH9173784.1;Name=HJH9173784.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461887.1;locus_tag=O5C65_003743;product=SecY-interacting protein;protein_id=HJH9173784.1;transl_table=11 DALFDA020000027.1 tpg gene 23181 24029 . + . ID=gene-O5C65_003744;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=O5C65_003744 DALFDA020000027.1 Protein Homology CDS 23181 24029 . + 0 ID=cds-HJH9173785.1;Parent=gene-O5C65_003744;Dbxref=NCBI_GP:HJH9173785.1;Name=HJH9173785.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461888.1;locus_tag=O5C65_003744;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=HJH9173785.1;transl_table=11 DALFDA020000027.1 tpg gene 24143 25507 . + . ID=gene-O5C65_003745;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=O5C65_003745 DALFDA020000027.1 Protein Homology CDS 24143 25507 . + 0 ID=cds-HJH9173786.1;Parent=gene-O5C65_003745;Dbxref=NCBI_GP:HJH9173786.1;Name=HJH9173786.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461889.1;locus_tag=O5C65_003745;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=HJH9173786.1;transl_table=11 DALFDA020000027.1 tpg gene 26072 27361 . + . ID=gene-O5C65_003746;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=O5C65_003746 DALFDA020000027.1 Protein Homology CDS 26072 27361 . + 0 ID=cds-HJH9173787.1;Parent=gene-O5C65_003746;Dbxref=NCBI_GP:HJH9173787.1;Name=HJH9173787.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461890.1;locus_tag=O5C65_003746;product=HAAAP family serine/threonine permease SdaC;protein_id=HJH9173787.1;transl_table=11 DALFDA020000027.1 tpg gene 27420 28787 . + . ID=gene-O5C65_003747;Name=O5C65_003747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003747 DALFDA020000027.1 Protein Homology CDS 27420 28787 . + 0 ID=cds-HJH9173788.1;Parent=gene-O5C65_003747;Dbxref=NCBI_GP:HJH9173788.1;Name=HJH9173788.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461891.2;locus_tag=O5C65_003747;product=L-serine ammonia-lyase;protein_id=HJH9173788.1;transl_table=11 DALFDA020000027.1 tpg gene 28958 29713 . + . ID=gene-O5C65_003748;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=O5C65_003748 DALFDA020000027.1 Protein Homology CDS 28958 29713 . + 0 ID=cds-HJH9173789.1;Parent=gene-O5C65_003748;Dbxref=NCBI_GP:HJH9173789.1;Name=HJH9173789.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=O5C65_003748;product=flap endonuclease Xni;protein_id=HJH9173789.1;transl_table=11 DALFDA020000027.1 tpg gene 29805 30953 . - . ID=gene-O5C65_003749;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=O5C65_003749 DALFDA020000027.1 Protein Homology CDS 29805 30953 . - 0 ID=cds-HJH9173790.1;Parent=gene-O5C65_003749;Dbxref=NCBI_GP:HJH9173790.1;Name=HJH9173790.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461893.1;locus_tag=O5C65_003749;product=lactaldehyde reductase;protein_id=HJH9173790.1;transl_table=11 DALFDA020000027.1 tpg gene 30970 31617 . - . ID=gene-O5C65_003750;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=O5C65_003750 DALFDA020000027.1 Protein Homology CDS 30970 31617 . - 0 ID=cds-HJH9173791.1;Parent=gene-O5C65_003750;Dbxref=NCBI_GP:HJH9173791.1;Name=HJH9173791.1;Ontology_term=GO:0006004,GO:0008270,GO:0008738;gbkey=CDS;gene=fucA;go_function=zinc ion binding|0008270||IEA,L-fuculose-phosphate aldolase activity|0008738||IEA;go_process=fucose metabolic process|0006004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461894.1;locus_tag=O5C65_003750;product=L-fuculose-phosphate aldolase;protein_id=HJH9173791.1;transl_table=11 DALFDA020000027.1 tpg gene 32174 33490 . + . ID=gene-O5C65_003751;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=O5C65_003751 DALFDA020000027.1 Protein Homology CDS 32174 33490 . + 0 ID=cds-HJH9173792.1;Parent=gene-O5C65_003751;Dbxref=NCBI_GP:HJH9173792.1;Name=HJH9173792.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=O5C65_003751;product=L-fucose:H+ symporter permease;protein_id=HJH9173792.1;transl_table=11 DALFDA020000027.1 tpg gene 33522 35297 . + . ID=gene-O5C65_003752;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=O5C65_003752 DALFDA020000027.1 Protein Homology CDS 33522 35297 . + 0 ID=cds-HJH9173793.1;Parent=gene-O5C65_003752;Dbxref=NCBI_GP:HJH9173793.1;Name=HJH9173793.1;Ontology_term=GO:0019317,GO:0008736,GO:0030145,GO:0005737;gbkey=CDS;gene=fucI;go_component=cytoplasm|0005737||IEA;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=fucose catabolic process|0019317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461895.1;locus_tag=O5C65_003752;product=L-fucose isomerase;protein_id=HJH9173793.1;transl_table=11 DALFDA020000027.1 tpg gene 35398 36816 . + . ID=gene-O5C65_003753;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=O5C65_003753 DALFDA020000027.1 Protein Homology CDS 35398 36816 . + 0 ID=cds-HJH9173794.1;Parent=gene-O5C65_003753;Dbxref=NCBI_GP:HJH9173794.1;Name=HJH9173794.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461896.1;locus_tag=O5C65_003753;product=L-fuculokinase;protein_id=HJH9173794.1;transl_table=11 DALFDA020000027.1 tpg gene 36818 37240 . + . ID=gene-O5C65_003754;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=O5C65_003754 DALFDA020000027.1 Protein Homology CDS 36818 37240 . + 0 ID=cds-HJH9173795.1;Parent=gene-O5C65_003754;Dbxref=NCBI_GP:HJH9173795.1;Name=HJH9173795.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461897.1;locus_tag=O5C65_003754;product=L-fucose mutarotase;protein_id=HJH9173795.1;transl_table=11 DALFDA020000027.1 tpg gene 37298 38008 . + . ID=gene-O5C65_003755;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=O5C65_003755 DALFDA020000027.1 Protein Homology CDS 37298 38008 . + 0 ID=cds-HJH9173796.1;Parent=gene-O5C65_003755;Dbxref=NCBI_GP:HJH9173796.1;Name=HJH9173796.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461898.1;locus_tag=O5C65_003755;product=L-fucose operon activator;protein_id=HJH9173796.1;transl_table=11 DALFDA020000027.1 tpg gene 38067 39167 . - . ID=gene-O5C65_003756;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=O5C65_003756 DALFDA020000027.1 Protein Homology CDS 38067 39167 . - 0 ID=cds-HJH9173797.1;Parent=gene-O5C65_003756;Dbxref=NCBI_GP:HJH9173797.1;Name=HJH9173797.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=O5C65_003756;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=HJH9173797.1;transl_table=11 DALFDA020000027.1 tpg gene 39160 39555 . - . ID=gene-O5C65_003757;Name=O5C65_003757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003757 DALFDA020000027.1 Protein Homology CDS 39160 39555 . - 0 ID=cds-HJH9173798.1;Parent=gene-O5C65_003757;Dbxref=NCBI_GP:HJH9173798.1;Name=HJH9173798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461900.1;locus_tag=O5C65_003757;product=DUF423 domain-containing protein;protein_id=HJH9173798.1;transl_table=11 DALFDA020000027.1 tpg gene 39574 40491 . - . ID=gene-O5C65_003758;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=O5C65_003758 DALFDA020000027.1 Protein Homology CDS 39574 40491 . - 0 ID=cds-HJH9173799.1;Parent=gene-O5C65_003758;Dbxref=NCBI_GP:HJH9173799.1;Name=HJH9173799.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=O5C65_003758;product=glycine cleavage system transcriptional regulator GcvA;protein_id=HJH9173799.1;transl_table=11 DALFDA020000027.1 tpg gene 40838 41065 . - . ID=gene-O5C65_003759;Name=O5C65_003759;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003759 DALFDA020000027.1 Protein Homology CDS 40838 41065 . - 0 ID=cds-HJH9173800.1;Parent=gene-O5C65_003759;Dbxref=NCBI_GP:HJH9173800.1;Name=HJH9173800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461902.1;locus_tag=O5C65_003759;product=YgdI/YgdR family lipoprotein;protein_id=HJH9173800.1;transl_table=11 DALFDA020000027.1 tpg gene 41258 42463 . + . ID=gene-O5C65_003760;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=O5C65_003760 DALFDA020000027.1 Protein Homology CDS 41258 42463 . + 0 ID=cds-HJH9173801.1;Parent=gene-O5C65_003760;Dbxref=NCBI_GP:HJH9173801.1;Name=HJH9173801.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461903.1;locus_tag=O5C65_003760;product=cysteine desulfurase CsdA;protein_id=HJH9173801.1;transl_table=11 DALFDA020000027.1 tpg gene 42463 42906 . + . ID=gene-O5C65_003761;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=O5C65_003761 DALFDA020000027.1 Protein Homology CDS 42463 42906 . + 0 ID=cds-HJH9173802.1;Parent=gene-O5C65_003761;Dbxref=NCBI_GP:HJH9173802.1;Name=HJH9173802.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461904.1;locus_tag=O5C65_003761;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=HJH9173802.1;transl_table=11 DALFDA020000027.1 tpg gene 43206 44093 . + . ID=gene-O5C65_003762;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=O5C65_003762 DALFDA020000027.1 Protein Homology CDS 43206 44093 . + 0 ID=cds-HJH9173803.1;Parent=gene-O5C65_003762;Dbxref=NCBI_GP:HJH9173803.1;Name=HJH9173803.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461905.3;locus_tag=O5C65_003762;product=EamA family transporter RarD;protein_id=HJH9173803.1;transl_table=11 DALFDA020000027.1 tpg gene 44145 44951 . - . ID=gene-O5C65_003763;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=O5C65_003763 DALFDA020000027.1 Protein Homology CDS 44145 44951 . - 0 ID=cds-HJH9173804.1;Parent=gene-O5C65_003763;Dbxref=NCBI_GP:HJH9173804.1;Name=HJH9173804.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461906.1;locus_tag=O5C65_003763;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=HJH9173804.1;transl_table=11 DALFDA020000027.1 tpg gene 45061 46158 . - . ID=gene-O5C65_003764;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=O5C65_003764 DALFDA020000027.1 Protein Homology CDS 45061 46158 . - 0 ID=cds-HJH9173805.1;Parent=gene-O5C65_003764;Dbxref=NCBI_GP:HJH9173805.1;Name=HJH9173805.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=O5C65_003764;product=murein transglycosylase A;protein_id=HJH9173805.1;transl_table=11 DALFDA020000027.1 tpg gene 46366 46442 . + . ID=gene-O5C65_003765;Name=O5C65_003765;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_003765 DALFDA020000027.1 tRNAscan-SE tRNA 46366 46442 . + . ID=rna-O5C65_003765;Parent=gene-O5C65_003765;anticodon=(pos:46400..46402);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003765;product=tRNA-Met DALFDA020000027.1 tRNAscan-SE exon 46366 46442 . + . ID=exon-O5C65_003765-1;Parent=rna-O5C65_003765;anticodon=(pos:46400..46402);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003765;product=tRNA-Met DALFDA020000027.1 tpg gene 46472 46548 . + . ID=gene-O5C65_003766;Name=O5C65_003766;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_003766 DALFDA020000027.1 tRNAscan-SE tRNA 46472 46548 . + . ID=rna-O5C65_003766;Parent=gene-O5C65_003766;anticodon=(pos:46506..46508);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003766;product=tRNA-Met DALFDA020000027.1 tRNAscan-SE exon 46472 46548 . + . ID=exon-O5C65_003766-1;Parent=rna-O5C65_003766;anticodon=(pos:46506..46508);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003766;product=tRNA-Met DALFDA020000027.1 tpg gene 46658 47911 . - . ID=gene-O5C65_003767;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=O5C65_003767 DALFDA020000027.1 Protein Homology CDS 46658 47911 . - 0 ID=cds-HJH9173806.1;Parent=gene-O5C65_003767;Dbxref=NCBI_GP:HJH9173806.1;Name=HJH9173806.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461908.1;locus_tag=O5C65_003767;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=HJH9173806.1;transl_table=11 DALFDA020000027.1 tpg gene 48144 49475 . + . ID=gene-O5C65_003768;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=O5C65_003768 DALFDA020000027.1 Protein Homology CDS 48144 49475 . + 0 ID=cds-HJH9173807.1;Parent=gene-O5C65_003768;Dbxref=NCBI_GP:HJH9173807.1;Name=HJH9173807.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461909.1;locus_tag=O5C65_003768;product=amino-acid N-acetyltransferase;protein_id=HJH9173807.1;transl_table=11 DALFDA020000027.1 tpg gene 49578 51413 . - . ID=gene-O5C65_003769;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=O5C65_003769 DALFDA020000027.1 Protein Homology CDS 49578 51413 . - 0 ID=cds-HJH9173808.1;Parent=gene-O5C65_003769;Dbxref=NCBI_GP:HJH9173808.1;Name=HJH9173808.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461910.1;locus_tag=O5C65_003769;product=exodeoxyribonuclease V subunit alpha;protein_id=HJH9173808.1;transl_table=11 DALFDA020000027.1 tpg gene 51410 54955 . - . ID=gene-O5C65_003770;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=O5C65_003770 DALFDA020000027.1 Protein Homology CDS 51410 54955 . - 0 ID=cds-HJH9173809.1;Parent=gene-O5C65_003770;Dbxref=NCBI_GP:HJH9173809.1;Name=HJH9173809.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461911.1;locus_tag=O5C65_003770;product=exodeoxyribonuclease V subunit beta;protein_id=HJH9173809.1;transl_table=11 DALFDA020000027.1 tpg gene 54948 57836 . - . ID=gene-O5C65_003771;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=O5C65_003771 DALFDA020000027.1 Protein Homology CDS 54948 57836 . - 0 ID=cds-HJH9173810.1;Parent=gene-O5C65_003771;Dbxref=NCBI_GP:HJH9173810.1;Name=HJH9173810.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461912.1;locus_tag=O5C65_003771;product=pitrilysin;protein_id=HJH9173810.1;transl_table=11 DALFDA020000027.1 tpg gene 58014 61385 . - . ID=gene-O5C65_003772;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=O5C65_003772 DALFDA020000027.1 Protein Homology CDS 58014 61385 . - 0 ID=cds-HJH9173811.1;Parent=gene-O5C65_003772;Dbxref=NCBI_GP:HJH9173811.1;Name=HJH9173811.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461913.2;locus_tag=O5C65_003772;product=exodeoxyribonuclease V subunit gamma;protein_id=HJH9173811.1;transl_table=11 DALFDA020000027.1 tpg gene 61401 61721 . - . ID=gene-O5C65_003773;Name=O5C65_003773;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003773 DALFDA020000027.1 Protein Homology CDS 61401 61721 . - 0 ID=cds-HJH9173812.1;Parent=gene-O5C65_003773;Dbxref=NCBI_GP:HJH9173812.1;Name=HJH9173812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461914.1;locus_tag=O5C65_003773;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=HJH9173812.1;transl_table=11 DALFDA020000027.1 tpg gene 61706 62113 . - . ID=gene-O5C65_003774;Name=O5C65_003774;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003774 DALFDA020000027.1 Protein Homology CDS 61706 62113 . - 0 ID=cds-HJH9173813.1;Parent=gene-O5C65_003774;Dbxref=NCBI_GP:HJH9173813.1;Name=HJH9173813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461915.1;locus_tag=O5C65_003774;product=DUF2509 family protein;protein_id=HJH9173813.1;transl_table=11 DALFDA020000027.1 tpg gene 62110 62673 . - . ID=gene-O5C65_003775;Name=O5C65_003775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003775 DALFDA020000027.1 Protein Homology CDS 62110 62673 . - 0 ID=cds-HJH9173814.1;Parent=gene-O5C65_003775;Dbxref=NCBI_GP:HJH9173814.1;Name=HJH9173814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461916.1;locus_tag=O5C65_003775;product=prepilin peptidase-dependent protein;protein_id=HJH9173814.1;transl_table=11 DALFDA020000027.1 tpg gene 62664 63134 . - . ID=gene-O5C65_003776;Name=O5C65_003776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003776 DALFDA020000027.1 Protein Homology CDS 62664 63134 . - 0 ID=cds-HJH9173815.1;Parent=gene-O5C65_003776;Dbxref=NCBI_GP:HJH9173815.1;Name=HJH9173815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077605.1;locus_tag=O5C65_003776;product=prepilin peptidase-dependent protein;protein_id=HJH9173815.1;transl_table=11 DALFDA020000027.1 tpg gene 63319 64113 . - . ID=gene-O5C65_003777;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=O5C65_003777 DALFDA020000027.1 Protein Homology CDS 63319 64113 . - 0 ID=cds-HJH9173816.1;Parent=gene-O5C65_003777;Dbxref=NCBI_GP:HJH9173816.1;Name=HJH9173816.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=O5C65_003777;product=thymidylate synthase;protein_id=HJH9173816.1;transl_table=11 DALFDA020000027.1 tpg gene 64120 64995 . - . ID=gene-O5C65_003778;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=O5C65_003778 DALFDA020000027.1 Protein Homology CDS 64120 64995 . - 0 ID=cds-HJH9173817.1;Parent=gene-O5C65_003778;Dbxref=NCBI_GP:HJH9173817.1;Name=HJH9173817.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461919.1;locus_tag=O5C65_003778;product=prolipoprotein diacylglyceryl transferase;protein_id=HJH9173817.1;transl_table=11 DALFDA020000027.1 tpg gene 65211 67457 . - . ID=gene-O5C65_003779;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=O5C65_003779 DALFDA020000027.1 Protein Homology CDS 65211 67457 . - 0 ID=cds-HJH9173818.1;Parent=gene-O5C65_003779;Dbxref=NCBI_GP:HJH9173818.1;Name=HJH9173818.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461920.1;locus_tag=O5C65_003779;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=HJH9173818.1;transl_table=11 DALFDA020000027.1 tpg gene 67470 68000 . - . ID=gene-O5C65_003780;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=O5C65_003780 DALFDA020000027.1 Protein Homology CDS 67470 68000 . - 0 ID=cds-HJH9173819.1;Parent=gene-O5C65_003780;Dbxref=NCBI_GP:HJH9173819.1;Name=HJH9173819.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=O5C65_003780;product=RNA pyrophosphohydrolase;protein_id=HJH9173819.1;transl_table=11 DALFDA020000027.1 tpg gene 68683 69378 . + . ID=gene-O5C65_003781;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=O5C65_003781 DALFDA020000027.1 Protein Homology CDS 68683 69378 . + 0 ID=cds-HJH9173820.1;Parent=gene-O5C65_003781;Dbxref=NCBI_GP:HJH9173820.1;Name=HJH9173820.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461922.1;locus_tag=O5C65_003781;product=DNA mismatch repair endonuclease MutH;protein_id=HJH9173820.1;transl_table=11 DALFDA020000027.1 tpg gene 69560 70273 . + . ID=gene-O5C65_003782;Name=O5C65_003782;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003782 DALFDA020000027.1 Protein Homology CDS 69560 70273 . + 0 ID=cds-HJH9173821.1;Parent=gene-O5C65_003782;Dbxref=NCBI_GP:HJH9173821.1;Name=HJH9173821.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461923.1;locus_tag=O5C65_003782;product=TerC family protein;protein_id=HJH9173821.1;transl_table=11 DALFDA020000027.1 tpg gene 70443 70661 . + . ID=gene-O5C65_003783;Name=O5C65_003783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003783 DALFDA020000027.1 Protein Homology CDS 70443 70661 . + 0 ID=cds-HJH9173822.1;Parent=gene-O5C65_003783;Dbxref=NCBI_GP:HJH9173822.1;Name=HJH9173822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461924.1;locus_tag=O5C65_003783;product=YgdI/YgdR family lipoprotein;protein_id=HJH9173822.1;transl_table=11 DALFDA020000027.1 tpg gene 70852 71892 . + . ID=gene-O5C65_003784;Name=O5C65_003784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003784 DALFDA020000027.1 Protein Homology CDS 70852 71892 . + 0 ID=cds-HJH9173823.1;Parent=gene-O5C65_003784;Dbxref=NCBI_GP:HJH9173823.1;Name=HJH9173823.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461925.1;locus_tag=O5C65_003784;product=NADP(H)-dependent aldo-keto reductase;protein_id=HJH9173823.1;transl_table=11 DALFDA020000027.1 tpg gene 71979 73181 . - . ID=gene-O5C65_003785;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=O5C65_003785 DALFDA020000027.1 Protein Homology CDS 71979 73181 . - 0 ID=cds-HJH9173824.1;Parent=gene-O5C65_003785;Dbxref=NCBI_GP:HJH9173824.1;Name=HJH9173824.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461926.1;locus_tag=O5C65_003785;product=lysophospholipid transporter LplT;protein_id=HJH9173824.1;transl_table=11 DALFDA020000027.1 tpg gene 73174 75333 . - . ID=gene-O5C65_003786;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=O5C65_003786 DALFDA020000027.1 Protein Homology CDS 73174 75333 . - 0 ID=cds-HJH9173825.1;Parent=gene-O5C65_003786;Dbxref=NCBI_GP:HJH9173825.1;Name=HJH9173825.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461927.1;locus_tag=O5C65_003786;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=HJH9173825.1;transl_table=11 DALFDA020000027.1 tpg gene 75490 75717 . - . ID=gene-O5C65_003787;Name=O5C65_003787;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003787 DALFDA020000027.1 GeneMarkS-2+ CDS 75490 75717 . - 0 ID=cds-HJH9173826.1;Parent=gene-O5C65_003787;Dbxref=NCBI_GP:HJH9173826.1;Name=HJH9173826.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_003787;product=hypothetical protein;protein_id=HJH9173826.1;transl_table=11 DALFDA020000027.1 tpg gene 75925 76953 . + . ID=gene-O5C65_003788;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=O5C65_003788 DALFDA020000027.1 Protein Homology CDS 75925 76953 . + 0 ID=cds-HJH9173827.1;Parent=gene-O5C65_003788;Dbxref=NCBI_GP:HJH9173827.1;Name=HJH9173827.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461928.1;locus_tag=O5C65_003788;product=HTH-type transcriptional regulator GalR;protein_id=HJH9173827.1;transl_table=11 DALFDA020000027.1 tpg gene 76964 77986 . + . ID=gene-O5C65_003789;Name=O5C65_003789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003789 DALFDA020000027.1 Protein Homology CDS 76964 77986 . + 0 ID=cds-HJH9173828.1;Parent=gene-O5C65_003789;Dbxref=NCBI_GP:HJH9173828.1;Name=HJH9173828.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461929.1;locus_tag=O5C65_003789;product=LacI family DNA-binding transcriptional regulator;protein_id=HJH9173828.1;transl_table=11 DALFDA020000027.1 tpg gene 77996 79258 . - . ID=gene-O5C65_003790;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=O5C65_003790 DALFDA020000027.1 Protein Homology CDS 77996 79258 . - 0 ID=cds-HJH9173829.1;Parent=gene-O5C65_003790;Dbxref=NCBI_GP:HJH9173829.1;Name=HJH9173829.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461930.1;locus_tag=O5C65_003790;product=diaminopimelate decarboxylase;protein_id=HJH9173829.1;transl_table=11 DALFDA020000027.1 tpg gene 79376 80311 . + . ID=gene-O5C65_003791;Name=O5C65_003791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003791 DALFDA020000027.1 Protein Homology CDS 79376 80311 . + 0 ID=cds-HJH9173830.1;Parent=gene-O5C65_003791;Dbxref=NCBI_GP:HJH9173830.1;Name=HJH9173830.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461931.1;locus_tag=O5C65_003791;product=LysR family transcriptional regulator;protein_id=HJH9173830.1;transl_table=11 DALFDA020000027.1 tpg gene 80283 80990 . - . ID=gene-O5C65_003792;Name=O5C65_003792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003792 DALFDA020000027.1 Protein Homology CDS 80283 80990 . - 0 ID=cds-HJH9173831.1;Parent=gene-O5C65_003792;Dbxref=NCBI_GP:HJH9173831.1;Name=HJH9173831.1;Ontology_term=GO:0008152,GO:0016855;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461932.1;locus_tag=O5C65_003792;product=aspartate/glutamate racemase;protein_id=HJH9173831.1;transl_table=11 DALFDA020000027.1 tpg gene 81103 82521 . - . ID=gene-O5C65_003793;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=O5C65_003793 DALFDA020000027.1 Protein Homology CDS 81103 82521 . - 0 ID=cds-HJH9173832.1;Parent=gene-O5C65_003793;Dbxref=NCBI_GP:HJH9173832.1;Name=HJH9173832.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461933.1;locus_tag=O5C65_003793;product=arabinose-proton symporter AraE;protein_id=HJH9173832.1;transl_table=11 DALFDA020000027.1 tpg gene 82875 83636 . - . ID=gene-O5C65_003794;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=O5C65_003794 DALFDA020000027.1 Protein Homology CDS 82875 83636 . - 0 ID=cds-HJH9173833.1;Parent=gene-O5C65_003794;Dbxref=NCBI_GP:HJH9173833.1;Name=HJH9173833.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461934.1;locus_tag=O5C65_003794;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=HJH9173833.1;transl_table=11 DALFDA020000027.1 tpg gene 83693 84529 . - . ID=gene-O5C65_003795;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=O5C65_003795 DALFDA020000027.1 Protein Homology CDS 83693 84529 . - 0 ID=cds-HJH9173834.1;Parent=gene-O5C65_003795;Dbxref=NCBI_GP:HJH9173834.1;Name=HJH9173834.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461935.1;locus_tag=O5C65_003795;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=HJH9173834.1;transl_table=11 DALFDA020000027.1 tpg gene 84959 86137 . - . ID=gene-O5C65_003796;Name=O5C65_003796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003796 DALFDA020000027.1 Protein Homology CDS 84959 86137 . - 0 ID=cds-HJH9173835.1;Parent=gene-O5C65_003796;Dbxref=NCBI_GP:HJH9173835.1;Name=HJH9173835.1;Ontology_term=GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461936.1;locus_tag=O5C65_003796;product=acetyl-CoA C-acetyltransferase;protein_id=HJH9173835.1;transl_table=11 DALFDA020000027.1 tpg gene 86260 87123 . - . ID=gene-O5C65_003797;Name=O5C65_003797;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003797 DALFDA020000027.1 Protein Homology CDS 86260 87123 . - 0 ID=cds-HJH9173836.1;Parent=gene-O5C65_003797;Dbxref=NCBI_GP:HJH9173836.1;Name=HJH9173836.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461937.1;locus_tag=O5C65_003797;product=LysR family transcriptional regulator;protein_id=HJH9173836.1;transl_table=11 DALFDA020000027.1 tpg gene 87227 87682 . + . ID=gene-O5C65_003798;Name=O5C65_003798;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003798 DALFDA020000027.1 Protein Homology CDS 87227 87682 . + 0 ID=cds-HJH9173837.1;Parent=gene-O5C65_003798;Dbxref=NCBI_GP:HJH9173837.1;Name=HJH9173837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465480.1;locus_tag=O5C65_003798;product=multidrug/biocide efflux PACE transporter;protein_id=HJH9173837.1;transl_table=11 DALFDA020000027.1 tpg gene 87824 89053 . + . ID=gene-O5C65_003799;Name=O5C65_003799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003799 DALFDA020000027.1 Protein Homology CDS 87824 89053 . + 0 ID=cds-HJH9173838.1;Parent=gene-O5C65_003799;Dbxref=NCBI_GP:HJH9173838.1;Name=HJH9173838.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461939.1;locus_tag=O5C65_003799;product=amino acid permease;protein_id=HJH9173838.1;transl_table=11 DALFDA020000027.1 tpg gene 89084 89356 . - . ID=gene-O5C65_003800;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=O5C65_003800 DALFDA020000027.1 Protein Homology CDS 89084 89356 . - 0 ID=cds-HJH9173839.1;Parent=gene-O5C65_003800;Dbxref=NCBI_GP:HJH9173839.1;Name=HJH9173839.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461940.1;locus_tag=O5C65_003800;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=HJH9173839.1;transl_table=11 DALFDA020000027.1 tpg gene 89478 90296 . + . ID=gene-O5C65_003801;Name=O5C65_003801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003801 DALFDA020000027.1 Protein Homology CDS 89478 90296 . + 0 ID=cds-HJH9173840.1;Parent=gene-O5C65_003801;Dbxref=NCBI_GP:HJH9173840.1;Name=HJH9173840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461941.1;locus_tag=O5C65_003801;product=nickel/cobalt efflux protein RcnA;protein_id=HJH9173840.1;transl_table=11 DALFDA020000027.1 tpg gene 90506 91264 . - . ID=gene-O5C65_003802;Name=O5C65_003802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003802 DALFDA020000027.1 Protein Homology CDS 90506 91264 . - 0 ID=cds-HJH9173841.1;Parent=gene-O5C65_003802;Dbxref=NCBI_GP:HJH9173841.1;Name=HJH9173841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461942.1;locus_tag=O5C65_003802;product=transcriptional regulator;protein_id=HJH9173841.1;transl_table=11 DALFDA020000027.1 tpg gene 91251 91524 . - . ID=gene-O5C65_003803;Name=O5C65_003803;end_range=91524,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003803;partial=true DALFDA020000027.1 Protein Homology CDS 91251 91524 . - 1 ID=cds-HJH9173842.1;Parent=gene-O5C65_003803;Dbxref=NCBI_GP:HJH9173842.1;Name=HJH9173842.1;Ontology_term=GO:0006351;end_range=91524,.;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006777639.1;locus_tag=O5C65_003803;partial=true;product=CaiF/GrlA family transcriptional regulator;protein_id=HJH9173842.1;transl_table=11 ##sequence-region DALFDA020000028.1 1 85954 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000028.1 tpg region 1 85954 . + . ID=DALFDA020000028.1:1..85954;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000028.1 tpg gene 1 644 . + . ID=gene-O5C65_003804;Name=sseF;gbkey=Gene;gene=sseF;gene_biotype=protein_coding;locus_tag=O5C65_003804;partial=true;start_range=.,1 DALFDA020000028.1 Protein Homology CDS 1 644 . + 2 ID=cds-HJH9173843.1;Parent=gene-O5C65_003804;Dbxref=NCBI_GP:HJH9173843.1;Name=HJH9173843.1;gbkey=CDS;gene=sseF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460369.1;locus_tag=O5C65_003804;partial=true;product=type III secretion systems effector SseF;protein_id=HJH9173843.1;start_range=.,1;transl_table=11 DALFDA020000028.1 tpg gene 641 1330 . + . ID=gene-O5C65_003805;Name=sseG;gbkey=Gene;gene=sseG;gene_biotype=protein_coding;locus_tag=O5C65_003805 DALFDA020000028.1 Protein Homology CDS 641 1330 . + 0 ID=cds-HJH9173844.1;Parent=gene-O5C65_003805;Dbxref=NCBI_GP:HJH9173844.1;Name=HJH9173844.1;Note=SseG%2C from Salmonella pathogenicity island 2%2C is a type III secretion system (T3SS) effector protein.;gbkey=CDS;gene=sseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460370.1;locus_tag=O5C65_003805;product=pathogenicity island 2 effector protein SseG;protein_id=HJH9173844.1;transl_table=11 DALFDA020000028.1 tpg gene 1424 1639 . + . ID=gene-O5C65_003806;Name=ssaG;gbkey=Gene;gene=ssaG;gene_biotype=protein_coding;locus_tag=O5C65_003806 DALFDA020000028.1 Protein Homology CDS 1424 1639 . + 0 ID=cds-HJH9173845.1;Parent=gene-O5C65_003806;Dbxref=NCBI_GP:HJH9173845.1;Name=HJH9173845.1;gbkey=CDS;gene=ssaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460371.1;locus_tag=O5C65_003806;product=type III secretion system needle filament protein SsaG;protein_id=HJH9173845.1;transl_table=11 DALFDA020000028.1 tpg gene 1617 1907 . + . ID=gene-O5C65_003807;Name=O5C65_003807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003807 DALFDA020000028.1 Protein Homology CDS 1617 1907 . + 0 ID=cds-HJH9173846.1;Parent=gene-O5C65_003807;Dbxref=NCBI_GP:HJH9173846.1;Name=HJH9173846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531123.1;locus_tag=O5C65_003807;product=EscG/YscG/SsaH family type III secretion system needle protein co-chaperone;protein_id=HJH9173846.1;transl_table=11 DALFDA020000028.1 tpg gene 1919 2167 . + . ID=gene-O5C65_003808;Name=ssaI;gbkey=Gene;gene=ssaI;gene_biotype=protein_coding;locus_tag=O5C65_003808 DALFDA020000028.1 Protein Homology CDS 1919 2167 . + 0 ID=cds-HJH9173847.1;Parent=gene-O5C65_003808;Dbxref=NCBI_GP:HJH9173847.1;Name=HJH9173847.1;gbkey=CDS;gene=ssaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562742.1;locus_tag=O5C65_003808;product=SctI family type III secretion system inner rod subunit SsaI;protein_id=HJH9173847.1;transl_table=11 DALFDA020000028.1 tpg gene 2164 2913 . + . ID=gene-O5C65_003809;Name=ssaJ;gbkey=Gene;gene=ssaJ;gene_biotype=protein_coding;locus_tag=O5C65_003809 DALFDA020000028.1 Protein Homology CDS 2164 2913 . + 0 ID=cds-HJH9173848.1;Parent=gene-O5C65_003809;Dbxref=NCBI_GP:HJH9173848.1;Name=HJH9173848.1;gbkey=CDS;gene=ssaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460374.1;locus_tag=O5C65_003809;product=SPI-2 type III secretion system apparatus lipoprotein SsaJ;protein_id=HJH9173848.1;transl_table=11 DALFDA020000028.1 tpg gene 2931 3479 . + . ID=gene-O5C65_003810;Name=O5C65_003810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003810 DALFDA020000028.1 Protein Homology CDS 2931 3479 . + 0 ID=cds-HJH9173849.1;Parent=gene-O5C65_003810;Dbxref=NCBI_GP:HJH9173849.1;Name=HJH9173849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460375.1;locus_tag=O5C65_003810;product=type III secretion system domain-containing protein;protein_id=HJH9173849.1;transl_table=11 DALFDA020000028.1 tpg gene 3476 4150 . + . ID=gene-O5C65_003811;Name=ssaK;gbkey=Gene;gene=ssaK;gene_biotype=protein_coding;locus_tag=O5C65_003811 DALFDA020000028.1 Protein Homology CDS 3476 4150 . + 0 ID=cds-HJH9173850.1;Parent=gene-O5C65_003811;Dbxref=NCBI_GP:HJH9173850.1;Name=HJH9173850.1;gbkey=CDS;gene=ssaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460376.1;locus_tag=O5C65_003811;product=SPI-2 type III secretion system apparatus protein SsaK;protein_id=HJH9173850.1;transl_table=11 DALFDA020000028.1 tpg gene 4116 5132 . + . ID=gene-O5C65_003812;Name=ssaL;gbkey=Gene;gene=ssaL;gene_biotype=protein_coding;locus_tag=O5C65_003812 DALFDA020000028.1 Protein Homology CDS 4116 5132 . + 0 ID=cds-HJH9173851.1;Parent=gene-O5C65_003812;Dbxref=NCBI_GP:HJH9173851.1;Name=HJH9173851.1;gbkey=CDS;gene=ssaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460377.1;locus_tag=O5C65_003812;product=SPI-2 type III secretion system apparatus protein SsaL;protein_id=HJH9173851.1;transl_table=11 DALFDA020000028.1 tpg gene 5190 5558 . + . ID=gene-O5C65_003813;Name=ssaM;gbkey=Gene;gene=ssaM;gene_biotype=protein_coding;locus_tag=O5C65_003813 DALFDA020000028.1 Protein Homology CDS 5190 5558 . + 0 ID=cds-HJH9173852.1;Parent=gene-O5C65_003813;Dbxref=NCBI_GP:HJH9173852.1;Name=HJH9173852.1;gbkey=CDS;gene=ssaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460378.1;locus_tag=O5C65_003813;product=SPI-2 type III secretion system apparatus protein SsaM;protein_id=HJH9173852.1;transl_table=11 DALFDA020000028.1 tpg gene 5543 7588 . + . ID=gene-O5C65_003814;Name=ssaV;gbkey=Gene;gene=ssaV;gene_biotype=protein_coding;locus_tag=O5C65_003814 DALFDA020000028.1 Protein Homology CDS 5543 7588 . + 0 ID=cds-HJH9173853.1;Parent=gene-O5C65_003814;Dbxref=NCBI_GP:HJH9173853.1;Name=HJH9173853.1;gbkey=CDS;gene=ssaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460379.1;locus_tag=O5C65_003814;product=SPI-2 type III secretion system apparatus protein SsaV;protein_id=HJH9173853.1;transl_table=11 DALFDA020000028.1 tpg gene 7578 8879 . + . ID=gene-O5C65_003815;Name=ssaN;gbkey=Gene;gene=ssaN;gene_biotype=protein_coding;locus_tag=O5C65_003815 DALFDA020000028.1 Protein Homology CDS 7578 8879 . + 0 ID=cds-HJH9173854.1;Parent=gene-O5C65_003815;Dbxref=NCBI_GP:HJH9173854.1;Name=HJH9173854.1;gbkey=CDS;gene=ssaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460380.1;locus_tag=O5C65_003815;product=SctN family type III secretion system ATPase SsaN;protein_id=HJH9173854.1;transl_table=11 DALFDA020000028.1 tpg gene 8882 9259 . + . ID=gene-O5C65_003816;Name=ssaO;gbkey=Gene;gene=ssaO;gene_biotype=protein_coding;locus_tag=O5C65_003816 DALFDA020000028.1 Protein Homology CDS 8882 9259 . + 0 ID=cds-HJH9173855.1;Parent=gene-O5C65_003816;Dbxref=NCBI_GP:HJH9173855.1;Name=HJH9173855.1;gbkey=CDS;gene=ssaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460381.1;locus_tag=O5C65_003816;product=SPI-2 type III secretion system apparatus protein SsaO;protein_id=HJH9173855.1;transl_table=11 DALFDA020000028.1 tpg gene 9240 9614 . + . ID=gene-O5C65_003817;Name=ssaP;gbkey=Gene;gene=ssaP;gene_biotype=protein_coding;locus_tag=O5C65_003817 DALFDA020000028.1 Protein Homology CDS 9240 9614 . + 0 ID=cds-HJH9173856.1;Parent=gene-O5C65_003817;Dbxref=NCBI_GP:HJH9173856.1;Name=HJH9173856.1;gbkey=CDS;gene=ssaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460382.1;locus_tag=O5C65_003817;product=SPI-2 type III secretion system apparatus protein SsaP;protein_id=HJH9173856.1;transl_table=11 DALFDA020000028.1 tpg gene 9595 10563 . + . ID=gene-O5C65_003818;Name=ssaQ;gbkey=Gene;gene=ssaQ;gene_biotype=protein_coding;locus_tag=O5C65_003818 DALFDA020000028.1 Protein Homology CDS 9595 10563 . + 0 ID=cds-HJH9173857.1;Parent=gene-O5C65_003818;Dbxref=NCBI_GP:HJH9173857.1;Name=HJH9173857.1;gbkey=CDS;gene=ssaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460383.1;locus_tag=O5C65_003818;product=SPI-2 type III secretion system cytoplasmic ring protein SsaQ;protein_id=HJH9173857.1;transl_table=11 DALFDA020000028.1 tpg gene 10631 11278 . + . ID=gene-O5C65_003819;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;locus_tag=O5C65_003819 DALFDA020000028.1 Protein Homology CDS 10631 11278 . + 0 ID=cds-HJH9173858.1;Parent=gene-O5C65_003819;Dbxref=NCBI_GP:HJH9173858.1;Name=HJH9173858.1;gbkey=CDS;gene=ssaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460384.1;locus_tag=O5C65_003819;product=SPI-2 type III secretion system export apparatus protein SsaR;protein_id=HJH9173858.1;transl_table=11 DALFDA020000028.1 tpg gene 11275 11541 . + . ID=gene-O5C65_003820;Name=ssas;gbkey=Gene;gene=ssas;gene_biotype=protein_coding;locus_tag=O5C65_003820 DALFDA020000028.1 Protein Homology CDS 11275 11541 . + 0 ID=cds-HJH9173859.1;Parent=gene-O5C65_003820;Dbxref=NCBI_GP:HJH9173859.1;Name=HJH9173859.1;gbkey=CDS;gene=ssas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460385.1;locus_tag=O5C65_003820;product=SPI-2 type III secretion system apparatus protein SsaS;protein_id=HJH9173859.1;transl_table=11 DALFDA020000028.1 tpg gene 11542 12321 . + . ID=gene-O5C65_003821;Name=ssaT;gbkey=Gene;gene=ssaT;gene_biotype=protein_coding;locus_tag=O5C65_003821 DALFDA020000028.1 Protein Homology CDS 11542 12321 . + 0 ID=cds-HJH9173860.1;Parent=gene-O5C65_003821;Dbxref=NCBI_GP:HJH9173860.1;Name=HJH9173860.1;gbkey=CDS;gene=ssaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460386.1;locus_tag=O5C65_003821;product=SPI-2 type III secretion system apparatus protein SsaT;protein_id=HJH9173860.1;transl_table=11 DALFDA020000028.1 tpg gene 12318 13376 . + . ID=gene-O5C65_003822;Name=ssaU;gbkey=Gene;gene=ssaU;gene_biotype=protein_coding;locus_tag=O5C65_003822 DALFDA020000028.1 Protein Homology CDS 12318 13376 . + 0 ID=cds-HJH9173861.1;Parent=gene-O5C65_003822;Dbxref=NCBI_GP:HJH9173861.1;Name=HJH9173861.1;gbkey=CDS;gene=ssaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460387.1;locus_tag=O5C65_003822;product=SPI-2 type III secretion system apparatus protein SsaU;protein_id=HJH9173861.1;transl_table=11 DALFDA020000028.1 tpg gene 13534 13610 . - . ID=gene-O5C65_003823;Name=O5C65_003823;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_003823 DALFDA020000028.1 tRNAscan-SE tRNA 13534 13610 . - . ID=rna-O5C65_003823;Parent=gene-O5C65_003823;anticodon=(pos:complement(13574..13576));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003823;product=tRNA-Val DALFDA020000028.1 tRNAscan-SE exon 13534 13610 . - . ID=exon-O5C65_003823-1;Parent=rna-O5C65_003823;anticodon=(pos:complement(13574..13576));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003823;product=tRNA-Val DALFDA020000028.1 tpg gene 13621 13697 . - . ID=gene-O5C65_003824;Name=O5C65_003824;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_003824 DALFDA020000028.1 tRNAscan-SE tRNA 13621 13697 . - . ID=rna-O5C65_003824;Parent=gene-O5C65_003824;anticodon=(pos:complement(13661..13663));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003824;product=tRNA-Val DALFDA020000028.1 tRNAscan-SE exon 13621 13697 . - . ID=exon-O5C65_003824-1;Parent=rna-O5C65_003824;anticodon=(pos:complement(13661..13663));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003824;product=tRNA-Val DALFDA020000028.1 tpg gene 13849 15222 . - . ID=gene-O5C65_003825;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=O5C65_003825 DALFDA020000028.1 Protein Homology CDS 13849 15222 . - 0 ID=cds-HJH9173862.1;Parent=gene-O5C65_003825;Dbxref=NCBI_GP:HJH9173862.1;Name=HJH9173862.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460388.2;locus_tag=O5C65_003825;product=multidrug efflux MATE transporter MdtK;protein_id=HJH9173862.1;transl_table=11 DALFDA020000028.1 tpg gene 15439 16080 . + . ID=gene-O5C65_003826;Name=O5C65_003826;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003826 DALFDA020000028.1 Protein Homology CDS 15439 16080 . + 0 ID=cds-HJH9173863.1;Parent=gene-O5C65_003826;Dbxref=NCBI_GP:HJH9173863.1;Name=HJH9173863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460389.1;locus_tag=O5C65_003826;product=riboflavin synthase;protein_id=HJH9173863.1;transl_table=11 DALFDA020000028.1 tpg gene 16122 17270 . - . ID=gene-O5C65_003827;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=O5C65_003827 DALFDA020000028.1 Protein Homology CDS 16122 17270 . - 0 ID=cds-HJH9173864.1;Parent=gene-O5C65_003827;Dbxref=NCBI_GP:HJH9173864.1;Name=HJH9173864.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460390.1;locus_tag=O5C65_003827;product=cyclopropane fatty acyl phospholipid synthase;protein_id=HJH9173864.1;transl_table=11 DALFDA020000028.1 tpg gene 17560 18765 . - . ID=gene-O5C65_003828;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;locus_tag=O5C65_003828 DALFDA020000028.1 Protein Homology CDS 17560 18765 . - 0 ID=cds-HJH9173865.1;Parent=gene-O5C65_003828;Dbxref=NCBI_GP:HJH9173865.1;Name=HJH9173865.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460391.1;locus_tag=O5C65_003828;product=purine nucleoside transporter PunC;protein_id=HJH9173865.1;transl_table=11 DALFDA020000028.1 tpg gene 18878 19810 . + . ID=gene-O5C65_003829;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=O5C65_003829 DALFDA020000028.1 Protein Homology CDS 18878 19810 . + 0 ID=cds-HJH9173866.1;Parent=gene-O5C65_003829;Dbxref=NCBI_GP:HJH9173866.1;Name=HJH9173866.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460392.1;locus_tag=O5C65_003829;product=DNA-binding transcriptional activator PunR;protein_id=HJH9173866.1;transl_table=11 DALFDA020000028.1 tpg gene 19807 20832 . - . ID=gene-O5C65_003830;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=O5C65_003830 DALFDA020000028.1 Protein Homology CDS 19807 20832 . - 0 ID=cds-HJH9173867.1;Parent=gene-O5C65_003830;Dbxref=NCBI_GP:HJH9173867.1;Name=HJH9173867.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=O5C65_003830;product=HTH-type transcriptional repressor PurR;protein_id=HJH9173867.1;transl_table=11 DALFDA020000028.1 tpg gene 21128 21217 . + . ID=gene-O5C65_003831;Name=O5C65_003831;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003831 DALFDA020000028.1 Protein Homology CDS 21128 21217 . + 0 ID=cds-HJH9173868.1;Parent=gene-O5C65_003831;Dbxref=NCBI_GP:HJH9173868.1;Name=HJH9173868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=O5C65_003831;product=YnhF family membrane protein;protein_id=HJH9173868.1;transl_table=11 DALFDA020000028.1 tpg gene 21300 21881 . - . ID=gene-O5C65_003832;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=O5C65_003832 DALFDA020000028.1 Protein Homology CDS 21300 21881 . - 0 ID=cds-HJH9173869.1;Parent=gene-O5C65_003832;Dbxref=NCBI_GP:HJH9173869.1;Name=HJH9173869.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460394.1;locus_tag=O5C65_003832;product=superoxide dismutase [Fe];protein_id=HJH9173869.1;transl_table=11 DALFDA020000028.1 tpg gene 22008 22829 . - . ID=gene-O5C65_003833;Name=O5C65_003833;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003833 DALFDA020000028.1 Protein Homology CDS 22008 22829 . - 0 ID=cds-HJH9173870.1;Parent=gene-O5C65_003833;Dbxref=NCBI_GP:HJH9173870.1;Name=HJH9173870.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310391.1;locus_tag=O5C65_003833;product=C40 family peptidase;protein_id=HJH9173870.1;transl_table=11 DALFDA020000028.1 tpg gene 23164 23511 . + . ID=gene-O5C65_003834;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=O5C65_003834 DALFDA020000028.1 Protein Homology CDS 23164 23511 . + 0 ID=cds-HJH9173871.1;Parent=gene-O5C65_003834;Dbxref=NCBI_GP:HJH9173871.1;Name=HJH9173871.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460396.1;locus_tag=O5C65_003834;product=monothiol glutaredoxin 4;protein_id=HJH9173871.1;transl_table=11 DALFDA020000028.1 tpg gene 23589 24236 . - . ID=gene-O5C65_003835;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=O5C65_003835 DALFDA020000028.1 Protein Homology CDS 23589 24236 . - 0 ID=cds-HJH9173872.1;Parent=gene-O5C65_003835;Dbxref=NCBI_GP:HJH9173872.1;Name=HJH9173872.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460397.1;locus_tag=O5C65_003835;product=ribonuclease T;protein_id=HJH9173872.1;transl_table=11 DALFDA020000028.1 tpg gene 24337 24744 . - . ID=gene-O5C65_003836;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=O5C65_003836 DALFDA020000028.1 Protein Homology CDS 24337 24744 . - 0 ID=cds-HJH9173873.1;Parent=gene-O5C65_003836;Dbxref=NCBI_GP:HJH9173873.1;Name=HJH9173873.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=O5C65_003836;product=lactoylglutathione lyase;protein_id=HJH9173873.1;transl_table=11 DALFDA020000028.1 tpg gene 24813 25910 . - . ID=gene-O5C65_003837;Name=O5C65_003837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003837 DALFDA020000028.1 Protein Homology CDS 24813 25910 . - 0 ID=cds-HJH9173874.1;Parent=gene-O5C65_003837;Dbxref=NCBI_GP:HJH9173874.1;Name=HJH9173874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460399.1;locus_tag=O5C65_003837;product=alkene reductase;protein_id=HJH9173874.1;transl_table=11 DALFDA020000028.1 tpg gene 25969 26568 . - . ID=gene-O5C65_003838;Name=O5C65_003838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003838 DALFDA020000028.1 Protein Homology CDS 25969 26568 . - 0 ID=cds-HJH9173875.1;Parent=gene-O5C65_003838;Dbxref=NCBI_GP:HJH9173875.1;Name=HJH9173875.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460400.1;locus_tag=O5C65_003838;product=TetR/AcrR family transcriptional regulator;protein_id=HJH9173875.1;transl_table=11 DALFDA020000028.1 tpg gene 26671 26910 . + . ID=gene-O5C65_003839;Name=O5C65_003839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003839 DALFDA020000028.1 Protein Homology CDS 26671 26910 . + 0 ID=cds-HJH9173876.1;Parent=gene-O5C65_003839;Dbxref=NCBI_GP:HJH9173876.1;Name=HJH9173876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460401.1;locus_tag=O5C65_003839;product=DUF1289 domain-containing protein;protein_id=HJH9173876.1;transl_table=11 DALFDA020000028.1 tpg gene 26961 27857 . + . ID=gene-O5C65_003840;Name=O5C65_003840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003840 DALFDA020000028.1 Protein Homology CDS 26961 27857 . + 0 ID=cds-HJH9173877.1;Parent=gene-O5C65_003840;Dbxref=NCBI_GP:HJH9173877.1;Name=HJH9173877.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460402.1;locus_tag=O5C65_003840;product=aldo/keto reductase;protein_id=HJH9173877.1;transl_table=11 DALFDA020000028.1 tpg gene 27937 28458 . + . ID=gene-O5C65_003841;Name=sodC2;gbkey=Gene;gene=sodC2;gene_biotype=protein_coding;gene_synonym=sodCII;locus_tag=O5C65_003841 DALFDA020000028.1 Protein Homology CDS 27937 28458 . + 0 ID=cds-HJH9173878.1;Parent=gene-O5C65_003841;Dbxref=NCBI_GP:HJH9173878.1;Name=HJH9173878.1;gbkey=CDS;gene=sodC2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460403.1;locus_tag=O5C65_003841;product=superoxide dismutase [Cu-Zn] SodC2;protein_id=HJH9173878.1;transl_table=11 DALFDA020000028.1 tpg gene 28434 30473 . - . ID=gene-O5C65_003842;Name=O5C65_003842;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003842 DALFDA020000028.1 Protein Homology CDS 28434 30473 . - 0 ID=cds-HJH9173879.1;Parent=gene-O5C65_003842;Dbxref=NCBI_GP:HJH9173879.1;Name=HJH9173879.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460404.1;locus_tag=O5C65_003842;product=FUSC family protein;protein_id=HJH9173879.1;transl_table=11 DALFDA020000028.1 tpg gene 30473 31333 . - . ID=gene-O5C65_003843;Name=O5C65_003843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003843 DALFDA020000028.1 Protein Homology CDS 30473 31333 . - 0 ID=cds-HJH9173880.1;Parent=gene-O5C65_003843;Dbxref=NCBI_GP:HJH9173880.1;Name=HJH9173880.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218841.1;locus_tag=O5C65_003843;product=efflux RND transporter periplasmic adaptor subunit;protein_id=HJH9173880.1;transl_table=11 DALFDA020000028.1 tpg gene 31336 31572 . - . ID=gene-O5C65_003844;Name=O5C65_003844;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003844 DALFDA020000028.1 Protein Homology CDS 31336 31572 . - 0 ID=cds-HJH9173881.1;Parent=gene-O5C65_003844;Dbxref=NCBI_GP:HJH9173881.1;Name=HJH9173881.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460406.1;locus_tag=O5C65_003844;product=DUF1656 domain-containing protein;protein_id=HJH9173881.1;transl_table=11 DALFDA020000028.1 tpg gene 31767 32207 . + . ID=gene-O5C65_003845;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=O5C65_003845 DALFDA020000028.1 Protein Homology CDS 31767 32207 . + 0 ID=cds-HJH9173882.1;Parent=gene-O5C65_003845;Dbxref=NCBI_GP:HJH9173882.1;Name=HJH9173882.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=O5C65_003845;product=transcriptional regulator SlyA;protein_id=HJH9173882.1;transl_table=11 DALFDA020000028.1 tpg gene 32254 32721 . - . ID=gene-O5C65_003846;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=O5C65_003846 DALFDA020000028.1 Protein Homology CDS 32254 32721 . - 0 ID=cds-HJH9173883.1;Parent=gene-O5C65_003846;Dbxref=NCBI_GP:HJH9173883.1;Name=HJH9173883.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460408.1;locus_tag=O5C65_003846;product=outer membrane lipoprotein SlyB;protein_id=HJH9173883.1;transl_table=11 DALFDA020000028.1 tpg gene 32994 34115 . + . ID=gene-O5C65_003847;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=O5C65_003847 DALFDA020000028.1 Protein Homology CDS 32994 34115 . + 0 ID=cds-HJH9173884.1;Parent=gene-O5C65_003847;Dbxref=NCBI_GP:HJH9173884.1;Name=HJH9173884.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460409.1;locus_tag=O5C65_003847;product=anhydro-N-acetylmuramic acid kinase;protein_id=HJH9173884.1;transl_table=11 DALFDA020000028.1 tpg gene 34203 34532 . + . ID=gene-O5C65_003848;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=O5C65_003848 DALFDA020000028.1 Protein Homology CDS 34203 34532 . + 0 ID=cds-HJH9173885.1;Parent=gene-O5C65_003848;Dbxref=NCBI_GP:HJH9173885.1;Name=HJH9173885.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460410.1;locus_tag=O5C65_003848;product=C-type lysozyme inhibitor;protein_id=HJH9173885.1;transl_table=11 DALFDA020000028.1 tpg gene 34591 35247 . + . ID=gene-O5C65_003849;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=O5C65_003849 DALFDA020000028.1 Protein Homology CDS 34591 35247 . + 0 ID=cds-HJH9173886.1;Parent=gene-O5C65_003849;Dbxref=NCBI_GP:HJH9173886.1;Name=HJH9173886.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=O5C65_003849;product=pyridoxamine 5'-phosphate oxidase;protein_id=HJH9173886.1;transl_table=11 DALFDA020000028.1 tpg gene 35374 36648 . + . ID=gene-O5C65_003850;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=O5C65_003850 DALFDA020000028.1 Protein Homology CDS 35374 36648 . + 0 ID=cds-HJH9173887.1;Parent=gene-O5C65_003850;Dbxref=NCBI_GP:HJH9173887.1;Name=HJH9173887.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460412.1;locus_tag=O5C65_003850;product=tyrosine--tRNA ligase;protein_id=HJH9173887.1;transl_table=11 DALFDA020000028.1 tpg gene 36708 37568 . + . ID=gene-O5C65_003851;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=O5C65_003851 DALFDA020000028.1 Protein Homology CDS 36708 37568 . + 0 ID=cds-HJH9173888.1;Parent=gene-O5C65_003851;Dbxref=NCBI_GP:HJH9173888.1;Name=HJH9173888.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460413.1;locus_tag=O5C65_003851;product=pyridoxal kinase PdxY;protein_id=HJH9173888.1;transl_table=11 DALFDA020000028.1 tpg gene 37627 38232 . - . ID=gene-O5C65_003852;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=O5C65_003852 DALFDA020000028.1 Protein Homology CDS 37627 38232 . - 0 ID=cds-HJH9173889.1;Parent=gene-O5C65_003852;Dbxref=NCBI_GP:HJH9173889.1;Name=HJH9173889.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460414.1;locus_tag=O5C65_003852;product=glutathione transferase GstA;protein_id=HJH9173889.1;transl_table=11 DALFDA020000028.1 tpg gene 38337 39842 . - . ID=gene-O5C65_003853;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=O5C65_003853 DALFDA020000028.1 Protein Homology CDS 38337 39842 . - 0 ID=cds-HJH9173890.1;Parent=gene-O5C65_003853;Dbxref=NCBI_GP:HJH9173890.1;Name=HJH9173890.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460415.1;locus_tag=O5C65_003853;product=dipeptide/tripeptide permease DtpA;protein_id=HJH9173890.1;transl_table=11 DALFDA020000028.1 tpg gene 40444 41079 . - . ID=gene-O5C65_003854;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=O5C65_003854 DALFDA020000028.1 Protein Homology CDS 40444 41079 . - 0 ID=cds-HJH9173891.1;Parent=gene-O5C65_003854;Dbxref=NCBI_GP:HJH9173891.1;Name=HJH9173891.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460416.1;locus_tag=O5C65_003854;product=endonuclease III;protein_id=HJH9173891.1;transl_table=11 DALFDA020000028.1 tpg gene 41079 41771 . - . ID=gene-O5C65_003855;Name=O5C65_003855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003855 DALFDA020000028.1 Protein Homology CDS 41079 41771 . - 0 ID=cds-HJH9173892.1;Parent=gene-O5C65_003855;Dbxref=NCBI_GP:HJH9173892.1;Name=HJH9173892.1;Ontology_term=GO:0022900;gbkey=CDS;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460417.1;locus_tag=O5C65_003855;product=electron transport complex subunit E;protein_id=HJH9173892.1;transl_table=11 DALFDA020000028.1 tpg gene 41774 42394 . - . ID=gene-O5C65_003856;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=O5C65_003856 DALFDA020000028.1 Protein Homology CDS 41774 42394 . - 0 ID=cds-HJH9173893.1;Parent=gene-O5C65_003856;Dbxref=NCBI_GP:HJH9173893.1;Name=HJH9173893.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460418.1;locus_tag=O5C65_003856;product=electron transport complex subunit RsxG;protein_id=HJH9173893.1;transl_table=11 DALFDA020000028.1 tpg gene 42398 43456 . - . ID=gene-O5C65_003857;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=O5C65_003857 DALFDA020000028.1 Protein Homology CDS 42398 43456 . - 0 ID=cds-HJH9173894.1;Parent=gene-O5C65_003857;Dbxref=NCBI_GP:HJH9173894.1;Name=HJH9173894.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460419.1;locus_tag=O5C65_003857;product=electron transport complex subunit RsxD;protein_id=HJH9173894.1;transl_table=11 DALFDA020000028.1 tpg gene 43457 45664 . - . ID=gene-O5C65_003858;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=O5C65_003858 DALFDA020000028.1 Protein Homology CDS 43457 45664 . - 0 ID=cds-HJH9173895.1;Parent=gene-O5C65_003858;Dbxref=NCBI_GP:HJH9173895.1;Name=HJH9173895.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460420.1;locus_tag=O5C65_003858;product=electron transport complex subunit RsxC;protein_id=HJH9173895.1;transl_table=11 DALFDA020000028.1 tpg gene 45657 46235 . - . ID=gene-O5C65_003859;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=O5C65_003859 DALFDA020000028.1 Protein Homology CDS 45657 46235 . - 0 ID=cds-HJH9173896.1;Parent=gene-O5C65_003859;Dbxref=NCBI_GP:HJH9173896.1;Name=HJH9173896.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460421.1;locus_tag=O5C65_003859;product=electron transport complex subunit RsxB;protein_id=HJH9173896.1;transl_table=11 DALFDA020000028.1 tpg gene 46235 46816 . - . ID=gene-O5C65_003860;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=O5C65_003860 DALFDA020000028.1 Protein Homology CDS 46235 46816 . - 0 ID=cds-HJH9173897.1;Parent=gene-O5C65_003860;Dbxref=NCBI_GP:HJH9173897.1;Name=HJH9173897.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=O5C65_003860;product=electron transport complex subunit RsxA;protein_id=HJH9173897.1;transl_table=11 DALFDA020000028.1 tpg gene 46893 47333 . - . ID=gene-O5C65_003861;Name=O5C65_003861;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003861 DALFDA020000028.1 Protein Homology CDS 46893 47333 . - 0 ID=cds-HJH9173898.1;Parent=gene-O5C65_003861;Dbxref=NCBI_GP:HJH9173898.1;Name=HJH9173898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460423.1;locus_tag=O5C65_003861;product=DUF2569 domain-containing protein;protein_id=HJH9173898.1;transl_table=11 DALFDA020000028.1 tpg gene 47422 47637 . - . ID=gene-O5C65_003862;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=O5C65_003862 DALFDA020000028.1 Protein Homology CDS 47422 47637 . - 0 ID=cds-HJH9173899.1;Parent=gene-O5C65_003862;Dbxref=NCBI_GP:HJH9173899.1;Name=HJH9173899.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460424.3;locus_tag=O5C65_003862;product=transcription modulator YdgT;protein_id=HJH9173899.1;transl_table=11 DALFDA020000028.1 tpg gene 47934 48059 . - . ID=gene-O5C65_003863;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=O5C65_003863 DALFDA020000028.1 Protein Homology CDS 47934 48059 . - 0 ID=cds-HJH9173900.1;Parent=gene-O5C65_003863;Dbxref=NCBI_GP:HJH9173900.1;Name=HJH9173900.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=O5C65_003863;product=division septum protein Blr;protein_id=HJH9173900.1;transl_table=11 DALFDA020000028.1 tpg gene 48267 49307 . + . ID=gene-O5C65_003864;Name=O5C65_003864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003864 DALFDA020000028.1 Protein Homology CDS 48267 49307 . + 0 ID=cds-HJH9173901.1;Parent=gene-O5C65_003864;Dbxref=NCBI_GP:HJH9173901.1;Name=HJH9173901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=O5C65_003864;product=oxidoreductase;protein_id=HJH9173901.1;transl_table=11 DALFDA020000028.1 tpg gene 49382 50383 . - . ID=gene-O5C65_003865;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=O5C65_003865 DALFDA020000028.1 Protein Homology CDS 49382 50383 . - 0 ID=cds-HJH9173902.1;Parent=gene-O5C65_003865;Dbxref=NCBI_GP:HJH9173902.1;Name=HJH9173902.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460426.1;locus_tag=O5C65_003865;product=adenosine deaminase;protein_id=HJH9173902.1;transl_table=11 DALFDA020000028.1 tpg pseudogene 50608 50739 . - . ID=gene-O5C65_003866;Name=O5C65_003866;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_003866;pseudo=true DALFDA020000028.1 Protein Homology CDS 50608 50739 . - 0 ID=cds-O5C65_003866;Parent=gene-O5C65_003866;Note=catalyzes the formation of homocysteine and pyruvate from cystathionine%3B also acts a a negative regulator for the mal regulon but interacting with the transcriptional activator MalT%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000459379.1;locus_tag=O5C65_003866;product=transcriptional regulator;pseudo=true;transl_table=11 DALFDA020000028.1 tpg pseudogene 50749 50969 . - . ID=gene-O5C65_003867;Name=O5C65_003867;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_003867;pseudo=true DALFDA020000028.1 Protein Homology CDS 50749 50969 . - 0 ID=cds-O5C65_003867;Parent=gene-O5C65_003867;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310356.1;locus_tag=O5C65_003867;product=glucose PTS transporter subunit EIIB;pseudo=true;transl_table=11 DALFDA020000028.1 tpg gene 51088 52596 . - . ID=gene-O5C65_003868;Name=O5C65_003868;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003868 DALFDA020000028.1 Protein Homology CDS 51088 52596 . - 0 ID=cds-HJH9173903.1;Parent=gene-O5C65_003868;Dbxref=NCBI_GP:HJH9173903.1;Name=HJH9173903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460427.1;locus_tag=O5C65_003868;product=YdgA family protein;protein_id=HJH9173903.1;transl_table=11 DALFDA020000028.1 tpg gene 52699 53874 . - . ID=gene-O5C65_003869;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=O5C65_003869 DALFDA020000028.1 Protein Homology CDS 52699 53874 . - 0 ID=cds-HJH9173904.1;Parent=gene-O5C65_003869;Dbxref=NCBI_GP:HJH9173904.1;Name=HJH9173904.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460428.1;locus_tag=O5C65_003869;product=mannose-6-phosphate isomerase;protein_id=HJH9173904.1;transl_table=11 DALFDA020000028.1 tpg gene 54074 55720 . + . ID=gene-O5C65_003870;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=O5C65_003870 DALFDA020000028.1 Protein Homology CDS 54074 55720 . + 0 ID=cds-HJH9173905.1;Parent=gene-O5C65_003870;Dbxref=NCBI_GP:HJH9173905.1;Name=HJH9173905.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=O5C65_003870;product=class I fumarate hydratase;protein_id=HJH9173905.1;transl_table=11 DALFDA020000028.1 tpg gene 55888 57291 . + . ID=gene-O5C65_003871;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=O5C65_003871 DALFDA020000028.1 Protein Homology CDS 55888 57291 . + 0 ID=cds-HJH9173906.1;Parent=gene-O5C65_003871;Dbxref=NCBI_GP:HJH9173906.1;Name=HJH9173906.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460430.1;locus_tag=O5C65_003871;product=class II fumarate hydratase;protein_id=HJH9173906.1;transl_table=11 DALFDA020000028.1 tpg gene 57288 58217 . - . ID=gene-O5C65_003872;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=O5C65_003872 DALFDA020000028.1 Protein Homology CDS 57288 58217 . - 0 ID=cds-HJH9173907.1;Parent=gene-O5C65_003872;Dbxref=NCBI_GP:HJH9173907.1;Name=HJH9173907.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460431.1;locus_tag=O5C65_003872;product=DNA replication terminus site-binding protein;protein_id=HJH9173907.1;transl_table=11 DALFDA020000028.1 tpg gene 58293 59594 . - . ID=gene-O5C65_003873;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=O5C65_003873 DALFDA020000028.1 Protein Homology CDS 58293 59594 . - 0 ID=cds-HJH9173908.1;Parent=gene-O5C65_003873;Dbxref=NCBI_GP:HJH9173908.1;Name=HJH9173908.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460432.1;locus_tag=O5C65_003873;product=two-component system sensor histidine kinase RstB;protein_id=HJH9173908.1;transl_table=11 DALFDA020000028.1 tpg gene 59705 61411 . - . ID=gene-O5C65_003874;Name=O5C65_003874;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003874 DALFDA020000028.1 Protein Homology CDS 59705 61411 . - 0 ID=cds-HJH9173909.1;Parent=gene-O5C65_003874;Dbxref=NCBI_GP:HJH9173909.1;Name=HJH9173909.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460433.1;locus_tag=O5C65_003874;product=amidohydrolase;protein_id=HJH9173909.1;transl_table=11 DALFDA020000028.1 tpg gene 61564 62715 . - . ID=gene-O5C65_003875;Name=ompS2;gbkey=Gene;gene=ompS2;gene_biotype=protein_coding;locus_tag=O5C65_003875 DALFDA020000028.1 Protein Homology CDS 61564 62715 . - 0 ID=cds-HJH9173910.1;Parent=gene-O5C65_003875;Dbxref=NCBI_GP:HJH9173910.1;Name=HJH9173910.1;gbkey=CDS;gene=ompS2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460434.1;locus_tag=O5C65_003875;product=porin OmpS2;protein_id=HJH9173910.1;transl_table=11 DALFDA020000028.1 tpg gene 63194 63925 . - . ID=gene-O5C65_003876;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=O5C65_003876 DALFDA020000028.1 Protein Homology CDS 63194 63925 . - 0 ID=cds-HJH9173911.1;Parent=gene-O5C65_003876;Dbxref=NCBI_GP:HJH9173911.1;Name=HJH9173911.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460435.1;locus_tag=O5C65_003876;product=two-component system response regulator RstA;protein_id=HJH9173911.1;transl_table=11 DALFDA020000028.1 tpg gene 64052 64387 . + . ID=gene-O5C65_003877;Name=O5C65_003877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003877 DALFDA020000028.1 Protein Homology CDS 64052 64387 . + 0 ID=cds-HJH9173912.1;Parent=gene-O5C65_003877;Dbxref=NCBI_GP:HJH9173912.1;Name=HJH9173912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460436.1;locus_tag=O5C65_003877;product=GlpM family protein;protein_id=HJH9173912.1;transl_table=11 DALFDA020000028.1 tpg gene 64449 65831 . - . ID=gene-O5C65_003878;Name=O5C65_003878;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003878 DALFDA020000028.1 Protein Homology CDS 64449 65831 . - 0 ID=cds-HJH9173913.1;Parent=gene-O5C65_003878;Dbxref=NCBI_GP:HJH9173913.1;Name=HJH9173913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460437.1;locus_tag=O5C65_003878;product=amino acid permease;protein_id=HJH9173913.1;transl_table=11 DALFDA020000028.1 tpg gene 66130 67074 . - . ID=gene-O5C65_003879;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=O5C65_003879 DALFDA020000028.1 Protein Homology CDS 66130 67074 . - 0 ID=cds-HJH9173914.1;Parent=gene-O5C65_003879;Dbxref=NCBI_GP:HJH9173914.1;Name=HJH9173914.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460438.1;locus_tag=O5C65_003879;product=DUF1471 family protein YdgH;protein_id=HJH9173914.1;transl_table=11 DALFDA020000028.1 tpg gene 67601 69130 . + . ID=gene-O5C65_003880;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=O5C65_003880 DALFDA020000028.1 Protein Homology CDS 67601 69130 . + 0 ID=cds-HJH9173915.1;Parent=gene-O5C65_003880;Dbxref=NCBI_GP:HJH9173915.1;Name=HJH9173915.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460439.1;locus_tag=O5C65_003880;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=HJH9173915.1;transl_table=11 DALFDA020000028.1 tpg gene 69141 70529 . + . ID=gene-O5C65_003881;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=O5C65_003881 DALFDA020000028.1 Protein Homology CDS 69141 70529 . + 0 ID=cds-HJH9173916.1;Parent=gene-O5C65_003881;Dbxref=NCBI_GP:HJH9173916.1;Name=HJH9173916.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=O5C65_003881;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=HJH9173916.1;transl_table=11 DALFDA020000028.1 tpg gene 70704 71738 . - . ID=gene-O5C65_003882;Name=O5C65_003882;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003882 DALFDA020000028.1 Protein Homology CDS 70704 71738 . - 0 ID=cds-HJH9173917.1;Parent=gene-O5C65_003882;Dbxref=NCBI_GP:HJH9173917.1;Name=HJH9173917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460441.1;locus_tag=O5C65_003882;product=AI-2E family transporter;protein_id=HJH9173917.1;transl_table=11 DALFDA020000028.1 tpg gene 71874 72044 . + . ID=gene-O5C65_003883;Name=O5C65_003883;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003883 DALFDA020000028.1 Protein Homology CDS 71874 72044 . + 0 ID=cds-HJH9173918.1;Parent=gene-O5C65_003883;Dbxref=NCBI_GP:HJH9173918.1;Name=HJH9173918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334396.1;locus_tag=O5C65_003883;product=hypothetical protein;protein_id=HJH9173918.1;transl_table=11 DALFDA020000028.1 tpg gene 72156 72518 . + . ID=gene-O5C65_003884;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=O5C65_003884 DALFDA020000028.1 Protein Homology CDS 72156 72518 . + 0 ID=cds-HJH9173919.1;Parent=gene-O5C65_003884;Dbxref=NCBI_GP:HJH9173919.1;Name=HJH9173919.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460442.1;locus_tag=O5C65_003884;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=HJH9173919.1;transl_table=11 DALFDA020000028.1 tpg gene 72505 72834 . + . ID=gene-O5C65_003885;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=O5C65_003885 DALFDA020000028.1 Protein Homology CDS 72505 72834 . + 0 ID=cds-HJH9173920.1;Parent=gene-O5C65_003885;Dbxref=NCBI_GP:HJH9173920.1;Name=HJH9173920.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460443.1;locus_tag=O5C65_003885;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=HJH9173920.1;transl_table=11 DALFDA020000028.1 tpg gene 72869 73690 . - . ID=gene-O5C65_003886;Name=O5C65_003886;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003886 DALFDA020000028.1 Protein Homology CDS 72869 73690 . - 0 ID=cds-HJH9173921.1;Parent=gene-O5C65_003886;Dbxref=NCBI_GP:HJH9173921.1;Name=HJH9173921.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460444.1;locus_tag=O5C65_003886;product=trypsin-like serine peptidase;protein_id=HJH9173921.1;transl_table=11 DALFDA020000028.1 tpg gene 73959 74207 . - . ID=gene-O5C65_003887;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=O5C65_003887 DALFDA020000028.1 Protein Homology CDS 73959 74207 . - 0 ID=cds-HJH9173922.1;Parent=gene-O5C65_003887;Dbxref=NCBI_GP:HJH9173922.1;Name=HJH9173922.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001698353.1;locus_tag=O5C65_003887;product=acid resistance repetitive basic protein Asr;protein_id=HJH9173922.1;transl_table=11 DALFDA020000028.1 tpg gene 74443 74535 . + . ID=gene-O5C65_003888;Name=O5C65_003888;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003888 DALFDA020000028.1 Protein Homology CDS 74443 74535 . + 0 ID=cds-HJH9173923.1;Parent=gene-O5C65_003888;Dbxref=NCBI_GP:HJH9173923.1;Name=HJH9173923.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=O5C65_003888;product=KPN_01571 family protein;protein_id=HJH9173923.1;transl_table=11 DALFDA020000028.1 tpg gene 74602 75855 . - . ID=gene-O5C65_003889;Name=O5C65_003889;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003889 DALFDA020000028.1 Protein Homology CDS 74602 75855 . - 0 ID=cds-HJH9173924.1;Parent=gene-O5C65_003889;Dbxref=NCBI_GP:HJH9173924.1;Name=HJH9173924.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460446.1;locus_tag=O5C65_003889;product=MFS transporter;protein_id=HJH9173924.1;transl_table=11 DALFDA020000028.1 tpg gene 75975 76874 . + . ID=gene-O5C65_003890;Name=O5C65_003890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003890 DALFDA020000028.1 Protein Homology CDS 75975 76874 . + 0 ID=cds-HJH9173925.1;Parent=gene-O5C65_003890;Dbxref=NCBI_GP:HJH9173925.1;Name=HJH9173925.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460447.1;locus_tag=O5C65_003890;product=LysR family transcriptional regulator;protein_id=HJH9173925.1;transl_table=11 DALFDA020000028.1 tpg gene 77002 78222 . + . ID=gene-O5C65_003891;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=O5C65_003891 DALFDA020000028.1 Protein Homology CDS 77002 78222 . + 0 ID=cds-HJH9173926.1;Parent=gene-O5C65_003891;Dbxref=NCBI_GP:HJH9173926.1;Name=HJH9173926.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460448.1;locus_tag=O5C65_003891;product=sugar metabolism global transcriptional regulator Mlc;protein_id=HJH9173926.1;transl_table=11 DALFDA020000028.1 tpg gene 78348 79043 . + . ID=gene-O5C65_003892;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=O5C65_003892 DALFDA020000028.1 Protein Homology CDS 78348 79043 . + 0 ID=cds-HJH9173927.1;Parent=gene-O5C65_003892;Dbxref=NCBI_GP:HJH9173927.1;Name=HJH9173927.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460449.1;locus_tag=O5C65_003892;product=dethiobiotin synthase;protein_id=HJH9173927.1;transl_table=11 DALFDA020000028.1 tpg gene 78999 80288 . - . ID=gene-O5C65_003893;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=O5C65_003893 DALFDA020000028.1 Protein Homology CDS 78999 80288 . - 0 ID=cds-HJH9173928.1;Parent=gene-O5C65_003893;Dbxref=NCBI_GP:HJH9173928.1;Name=HJH9173928.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460450.3;locus_tag=O5C65_003893;product=voltage-gated ClC-type chloride channel ClcB;protein_id=HJH9173928.1;transl_table=11 DALFDA020000028.1 tpg gene 80424 81572 . - . ID=gene-O5C65_003894;Name=osmV;gbkey=Gene;gene=osmV;gene_biotype=protein_coding;locus_tag=O5C65_003894 DALFDA020000028.1 Protein Homology CDS 80424 81572 . - 0 ID=cds-HJH9173929.1;Parent=gene-O5C65_003894;Dbxref=NCBI_GP:HJH9173929.1;Name=HJH9173929.1;gbkey=CDS;gene=osmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460451.1;locus_tag=O5C65_003894;product=osmoprotectant ABC transporter ATP-binding protein OsmV;protein_id=HJH9173929.1;transl_table=11 DALFDA020000028.1 tpg gene 81572 82219 . - . ID=gene-O5C65_003895;Name=osmW;gbkey=Gene;gene=osmW;gene_biotype=protein_coding;locus_tag=O5C65_003895 DALFDA020000028.1 Protein Homology CDS 81572 82219 . - 0 ID=cds-HJH9173930.1;Parent=gene-O5C65_003895;Dbxref=NCBI_GP:HJH9173930.1;Name=HJH9173930.1;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460452.1;locus_tag=O5C65_003895;product=osmoprotectant ABC transporter permease OsmW;protein_id=HJH9173930.1;transl_table=11 DALFDA020000028.1 tpg gene 82229 83131 . - . ID=gene-O5C65_003896;Name=osmX;gbkey=Gene;gene=osmX;gene_biotype=protein_coding;locus_tag=O5C65_003896 DALFDA020000028.1 Protein Homology CDS 82229 83131 . - 0 ID=cds-HJH9173931.1;Parent=gene-O5C65_003896;Dbxref=NCBI_GP:HJH9173931.1;Name=HJH9173931.1;gbkey=CDS;gene=osmX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460453.1;locus_tag=O5C65_003896;product=osmoprotectant ABC transporter substrate-binding protein OsmX;protein_id=HJH9173931.1;transl_table=11 DALFDA020000028.1 tpg gene 83160 83870 . - . ID=gene-O5C65_003897;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=O5C65_003897 DALFDA020000028.1 Protein Homology CDS 83160 83870 . - 0 ID=cds-HJH9173932.1;Parent=gene-O5C65_003897;Dbxref=NCBI_GP:HJH9173932.1;Name=HJH9173932.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460454.1;locus_tag=O5C65_003897;product=osmoprotectant ABC transporter permease OsmY;protein_id=HJH9173932.1;transl_table=11 DALFDA020000028.1 tpg gene 84175 84789 . - . ID=gene-O5C65_003898;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=O5C65_003898 DALFDA020000028.1 Protein Homology CDS 84175 84789 . - 0 ID=cds-HJH9173933.1;Parent=gene-O5C65_003898;Dbxref=NCBI_GP:HJH9173933.1;Name=HJH9173933.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460455.1;locus_tag=O5C65_003898;product=Tat proofreading chaperone DmsD;protein_id=HJH9173933.1;transl_table=11 DALFDA020000028.1 tpg gene 84832 85689 . - . ID=gene-O5C65_003899;Name=O5C65_003899;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003899 DALFDA020000028.1 Protein Homology CDS 84832 85689 . - 0 ID=cds-HJH9173934.1;Parent=gene-O5C65_003899;Dbxref=NCBI_GP:HJH9173934.1;Name=HJH9173934.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460456.1;locus_tag=O5C65_003899;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=HJH9173934.1;transl_table=11 DALFDA020000028.1 tpg gene 85691 85954 . - . ID=gene-O5C65_003900;Name=dmsB;end_range=85954,.;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=O5C65_003900;partial=true DALFDA020000028.1 Protein Homology CDS 85691 85954 . - 0 ID=cds-HJH9173935.1;Parent=gene-O5C65_003900;Dbxref=NCBI_GP:HJH9173935.1;Name=HJH9173935.1;end_range=85954,.;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459941.1;locus_tag=O5C65_003900;partial=true;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=HJH9173935.1;transl_table=11 ##sequence-region DALFDA020000029.1 1 76914 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000029.1 tpg region 1 76914 . + . ID=DALFDA020000029.1:1..76914;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000029.1 tpg gene 5 1405 . - . ID=gene-O5C65_003901;Name=O5C65_003901;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003901 DALFDA020000029.1 Protein Homology CDS 5 1405 . - 0 ID=cds-HJH9173936.1;Parent=gene-O5C65_003901;Dbxref=NCBI_GP:HJH9173936.1;Name=HJH9173936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462720.1;locus_tag=O5C65_003901;product=cytochrome-c peroxidase;protein_id=HJH9173936.1;transl_table=11 DALFDA020000029.1 tpg gene 1595 2227 . - . ID=gene-O5C65_003902;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=O5C65_003902 DALFDA020000029.1 Protein Homology CDS 1595 2227 . - 0 ID=cds-HJH9173937.1;Parent=gene-O5C65_003902;Dbxref=NCBI_GP:HJH9173937.1;Name=HJH9173937.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462721.1;locus_tag=O5C65_003902;product=molecular chaperone TorD;protein_id=HJH9173937.1;transl_table=11 DALFDA020000029.1 tpg gene 2220 4772 . - . ID=gene-O5C65_003903;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=O5C65_003903 DALFDA020000029.1 Protein Homology CDS 2220 4772 . - 0 ID=cds-HJH9173938.1;Parent=gene-O5C65_003903;Dbxref=NCBI_GP:HJH9173938.1;Name=HJH9173938.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462722.1;locus_tag=O5C65_003903;product=trimethylamine-N-oxide reductase TorA;protein_id=HJH9173938.1;transl_table=11 DALFDA020000029.1 tpg gene 4762 5946 . - . ID=gene-O5C65_003904;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=O5C65_003904 DALFDA020000029.1 Protein Homology CDS 4762 5946 . - 0 ID=cds-HJH9173939.1;Parent=gene-O5C65_003904;Dbxref=NCBI_GP:HJH9173939.1;Name=HJH9173939.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462723.1;locus_tag=O5C65_003904;product=pentaheme c-type cytochrome TorC;protein_id=HJH9173939.1;transl_table=11 DALFDA020000029.1 tpg gene 6076 6768 . + . ID=gene-O5C65_003905;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=O5C65_003905 DALFDA020000029.1 Protein Homology CDS 6076 6768 . + 0 ID=cds-HJH9173940.1;Parent=gene-O5C65_003905;Dbxref=NCBI_GP:HJH9173940.1;Name=HJH9173940.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462724.1;locus_tag=O5C65_003905;product=two-component system response regulator TorR;protein_id=HJH9173940.1;transl_table=11 DALFDA020000029.1 tpg gene 6741 7781 . - . ID=gene-O5C65_003906;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=O5C65_003906 DALFDA020000029.1 Protein Homology CDS 6741 7781 . - 0 ID=cds-HJH9173941.1;Parent=gene-O5C65_003906;Dbxref=NCBI_GP:HJH9173941.1;Name=HJH9173941.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462725.1;locus_tag=O5C65_003906;product=TMAO reductase system periplasmic protein TorT;protein_id=HJH9173941.1;transl_table=11 DALFDA020000029.1 tpg gene 7861 10596 . + . ID=gene-O5C65_003907;Name=torS;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=O5C65_003907 DALFDA020000029.1 Protein Homology CDS 7861 10596 . + 0 ID=cds-HJH9173942.1;Parent=gene-O5C65_003907;Dbxref=NCBI_GP:HJH9173942.1;Name=HJH9173942.1;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462726.1;locus_tag=O5C65_003907;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=HJH9173942.1;transl_table=11 DALFDA020000029.1 tpg gene 10622 11959 . - . ID=gene-O5C65_003908;Name=O5C65_003908;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003908 DALFDA020000029.1 Protein Homology CDS 10622 11959 . - 0 ID=cds-HJH9173943.1;Parent=gene-O5C65_003908;Dbxref=NCBI_GP:HJH9173943.1;Name=HJH9173943.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462727.1;locus_tag=O5C65_003908;product=MFS transporter;protein_id=HJH9173943.1;transl_table=11 DALFDA020000029.1 tpg gene 12044 13192 . - . ID=gene-O5C65_003909;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=O5C65_003909 DALFDA020000029.1 Protein Homology CDS 12044 13192 . - 0 ID=cds-HJH9173944.1;Parent=gene-O5C65_003909;Dbxref=NCBI_GP:HJH9173944.1;Name=HJH9173944.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=O5C65_003909;product=galactonate dehydratase;protein_id=HJH9173944.1;transl_table=11 DALFDA020000029.1 tpg gene 13189 13806 . - . ID=gene-O5C65_003910;Name=O5C65_003910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003910 DALFDA020000029.1 Protein Homology CDS 13189 13806 . - 0 ID=cds-HJH9173945.1;Parent=gene-O5C65_003910;Dbxref=NCBI_GP:HJH9173945.1;Name=HJH9173945.1;Ontology_term=GO:0034194,GO:0008674;gbkey=CDS;go_function=2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity|0008674||IEA;go_process=D-galactonate catabolic process|0034194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229569.1;locus_tag=O5C65_003910;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=HJH9173945.1;transl_table=11 DALFDA020000029.1 tpg gene 13790 14668 . - . ID=gene-O5C65_003911;Name=O5C65_003911;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003911 DALFDA020000029.1 Protein Homology CDS 13790 14668 . - 0 ID=cds-HJH9173946.1;Parent=gene-O5C65_003911;Dbxref=NCBI_GP:HJH9173946.1;Name=HJH9173946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462729.1;locus_tag=O5C65_003911;product=2-dehydro-3-deoxygalactonokinase;protein_id=HJH9173946.1;transl_table=11 DALFDA020000029.1 tpg gene 14665 15354 . - . ID=gene-O5C65_003912;Name=dgoR;gbkey=Gene;gene=dgoR;gene_biotype=protein_coding;locus_tag=O5C65_003912 DALFDA020000029.1 Protein Homology CDS 14665 15354 . - 0 ID=cds-HJH9173947.1;Parent=gene-O5C65_003912;Dbxref=NCBI_GP:HJH9173947.1;Name=HJH9173947.1;gbkey=CDS;gene=dgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462730.1;locus_tag=O5C65_003912;product=D-galactonate utilization transcriptional regulator DgoR;protein_id=HJH9173947.1;transl_table=11 DALFDA020000029.1 tpg gene 15614 16459 . - . ID=gene-O5C65_003913;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=O5C65_003913 DALFDA020000029.1 Protein Homology CDS 15614 16459 . - 0 ID=cds-HJH9173948.1;Parent=gene-O5C65_003913;Dbxref=NCBI_GP:HJH9173948.1;Name=HJH9173948.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462731.1;locus_tag=O5C65_003913;product=sugar-phosphatase;protein_id=HJH9173948.1;transl_table=11 DALFDA020000029.1 tpg gene 16764 18026 . + . ID=gene-O5C65_003914;Name=O5C65_003914;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003914 DALFDA020000029.1 Protein Homology CDS 16764 18026 . + 0 ID=cds-HJH9173949.1;Parent=gene-O5C65_003914;Dbxref=NCBI_GP:HJH9173949.1;Name=HJH9173949.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462732.1;locus_tag=O5C65_003914;product=MFS transporter;protein_id=HJH9173949.1;transl_table=11 DALFDA020000029.1 tpg gene 18040 19233 . + . ID=gene-O5C65_003915;Name=O5C65_003915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003915 DALFDA020000029.1 Protein Homology CDS 18040 19233 . + 0 ID=cds-HJH9173950.1;Parent=gene-O5C65_003915;Dbxref=NCBI_GP:HJH9173950.1;Name=HJH9173950.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462733.1;locus_tag=O5C65_003915;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=HJH9173950.1;transl_table=11 DALFDA020000029.1 tpg gene 19348 20244 . + . ID=gene-O5C65_003916;Name=O5C65_003916;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003916 DALFDA020000029.1 Protein Homology CDS 19348 20244 . + 0 ID=cds-HJH9173951.1;Parent=gene-O5C65_003916;Dbxref=NCBI_GP:HJH9173951.1;Name=HJH9173951.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462734.1;locus_tag=O5C65_003916;product=LysR family transcriptional regulator;protein_id=HJH9173951.1;transl_table=11 DALFDA020000029.1 tpg gene 20263 22677 . - . ID=gene-O5C65_003917;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=O5C65_003917 DALFDA020000029.1 Protein Homology CDS 20263 22677 . - 0 ID=cds-HJH9173952.1;Parent=gene-O5C65_003917;Dbxref=NCBI_GP:HJH9173952.1;Name=HJH9173952.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=O5C65_003917;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=HJH9173952.1;transl_table=11 DALFDA020000029.1 tpg gene 22706 23779 . - . ID=gene-O5C65_003918;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=O5C65_003918 DALFDA020000029.1 Protein Homology CDS 22706 23779 . - 0 ID=cds-HJH9173953.1;Parent=gene-O5C65_003918;Dbxref=NCBI_GP:HJH9173953.1;Name=HJH9173953.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=O5C65_003918;product=DNA replication/repair protein RecF;protein_id=HJH9173953.1;transl_table=11 DALFDA020000029.1 tpg gene 23977 25077 . - . ID=gene-O5C65_003919;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=O5C65_003919 DALFDA020000029.1 Protein Homology CDS 23977 25077 . - 0 ID=cds-HJH9173954.1;Parent=gene-O5C65_003919;Dbxref=NCBI_GP:HJH9173954.1;Name=HJH9173954.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=O5C65_003919;product=DNA polymerase III subunit beta;protein_id=HJH9173954.1;transl_table=11 DALFDA020000029.1 tpg gene 25082 26482 . - . ID=gene-O5C65_003920;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=O5C65_003920 DALFDA020000029.1 Protein Homology CDS 25082 26482 . - 0 ID=cds-HJH9173955.1;Parent=gene-O5C65_003920;Dbxref=NCBI_GP:HJH9173955.1;Name=HJH9173955.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462738.1;locus_tag=O5C65_003920;product=chromosomal replication initiator protein DnaA;protein_id=HJH9173955.1;transl_table=11 DALFDA020000029.1 tpg gene 26822 26914 . + . ID=gene-O5C65_003921;Name=O5C65_003921;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003921 DALFDA020000029.1 Protein Homology CDS 26822 26914 . + 0 ID=cds-HJH9173956.1;Parent=gene-O5C65_003921;Dbxref=NCBI_GP:HJH9173956.1;Name=HJH9173956.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048187.1;locus_tag=O5C65_003921;product=hypothetical protein;protein_id=HJH9173956.1;transl_table=11 DALFDA020000029.1 tpg gene 27143 27283 . + . ID=gene-O5C65_003922;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=O5C65_003922 DALFDA020000029.1 Protein Homology CDS 27143 27283 . + 0 ID=cds-HJH9173957.1;Parent=gene-O5C65_003922;Dbxref=NCBI_GP:HJH9173957.1;Name=HJH9173957.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=O5C65_003922;product=50S ribosomal protein L34;protein_id=HJH9173957.1;transl_table=11 DALFDA020000029.1 tpg gene 27300 27659 . + . ID=gene-O5C65_003923;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=O5C65_003923 DALFDA020000029.1 Protein Homology CDS 27300 27659 . + 0 ID=cds-HJH9173958.1;Parent=gene-O5C65_003923;Dbxref=NCBI_GP:HJH9173958.1;Name=HJH9173958.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=O5C65_003923;product=ribonuclease P protein component;protein_id=HJH9173958.1;transl_table=11 DALFDA020000029.1 tpg gene 27623 27880 . + . ID=gene-O5C65_003924;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=O5C65_003924 DALFDA020000029.1 Protein Homology CDS 27623 27880 . + 0 ID=cds-HJH9173959.1;Parent=gene-O5C65_003924;Dbxref=NCBI_GP:HJH9173959.1;Name=HJH9173959.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=O5C65_003924;product=membrane protein insertion efficiency factor YidD;protein_id=HJH9173959.1;transl_table=11 DALFDA020000029.1 tpg gene 27883 29529 . + . ID=gene-O5C65_003925;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=O5C65_003925 DALFDA020000029.1 Protein Homology CDS 27883 29529 . + 0 ID=cds-HJH9173960.1;Parent=gene-O5C65_003925;Dbxref=NCBI_GP:HJH9173960.1;Name=HJH9173960.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462742.1;locus_tag=O5C65_003925;product=membrane protein insertase YidC;protein_id=HJH9173960.1;transl_table=11 DALFDA020000029.1 tpg gene 29672 31036 . + . ID=gene-O5C65_003926;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=O5C65_003926 DALFDA020000029.1 Protein Homology CDS 29672 31036 . + 0 ID=cds-HJH9173961.1;Parent=gene-O5C65_003926;Dbxref=NCBI_GP:HJH9173961.1;Name=HJH9173961.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=O5C65_003926;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=HJH9173961.1;transl_table=11 DALFDA020000029.1 tpg gene 31219 32406 . + . ID=gene-O5C65_003927;Name=O5C65_003927;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003927 DALFDA020000029.1 Protein Homology CDS 31219 32406 . + 0 ID=cds-HJH9173962.1;Parent=gene-O5C65_003927;Dbxref=NCBI_GP:HJH9173962.1;Name=HJH9173962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462746.1;locus_tag=O5C65_003927;product=MFS transporter;protein_id=HJH9173962.1;transl_table=11 DALFDA020000029.1 tpg gene 32375 33334 . + . ID=gene-O5C65_003928;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=O5C65_003928 DALFDA020000029.1 Protein Homology CDS 32375 33334 . + 0 ID=cds-HJH9173963.1;Parent=gene-O5C65_003928;Dbxref=NCBI_GP:HJH9173963.1;Name=HJH9173963.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462747.1;locus_tag=O5C65_003928;product=HTH-type transcriptional regulator YidZ;protein_id=HJH9173963.1;transl_table=11 DALFDA020000029.1 tpg gene 33492 34247 . + . ID=gene-O5C65_003929;Name=O5C65_003929;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003929 DALFDA020000029.1 Protein Homology CDS 33492 34247 . + 0 ID=cds-HJH9173964.1;Parent=gene-O5C65_003929;Dbxref=NCBI_GP:HJH9173964.1;Name=HJH9173964.1;Ontology_term=GO:0008897;gbkey=CDS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462748.1;locus_tag=O5C65_003929;product=4'-phosphopantetheinyl transferase family protein;protein_id=HJH9173964.1;transl_table=11 DALFDA020000029.1 tpg gene 34247 34831 . + . ID=gene-O5C65_003930;Name=O5C65_003930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003930 DALFDA020000029.1 Protein Homology CDS 34247 34831 . + 0 ID=cds-HJH9173965.1;Parent=gene-O5C65_003930;Dbxref=NCBI_GP:HJH9173965.1;Name=HJH9173965.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462749.3;locus_tag=O5C65_003930;product=NADPH-dependent FMN reductase;protein_id=HJH9173965.1;transl_table=11 DALFDA020000029.1 tpg gene 34876 36213 . - . ID=gene-O5C65_003931;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=O5C65_003931 DALFDA020000029.1 Protein Homology CDS 34876 36213 . - 0 ID=cds-HJH9173966.1;Parent=gene-O5C65_003931;Dbxref=NCBI_GP:HJH9173966.1;Name=HJH9173966.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=O5C65_003931;product=adenine permease AdeP;protein_id=HJH9173966.1;transl_table=11 DALFDA020000029.1 tpg gene 36382 37047 . + . ID=gene-O5C65_003932;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=O5C65_003932 DALFDA020000029.1 Protein Homology CDS 36382 37047 . + 0 ID=cds-HJH9173967.1;Parent=gene-O5C65_003932;Dbxref=NCBI_GP:HJH9173967.1;Name=HJH9173967.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462751.1;locus_tag=O5C65_003932;product=6-phosphogluconate phosphatase;protein_id=HJH9173967.1;transl_table=11 DALFDA020000029.1 tpg gene 37142 37867 . - . ID=gene-O5C65_003933;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=O5C65_003933 DALFDA020000029.1 Protein Homology CDS 37142 37867 . - 0 ID=cds-HJH9173968.1;Parent=gene-O5C65_003933;Dbxref=NCBI_GP:HJH9173968.1;Name=HJH9173968.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462752.1;locus_tag=O5C65_003933;product=phosphate signaling complex protein PhoU;protein_id=HJH9173968.1;transl_table=11 DALFDA020000029.1 tpg gene 37882 38655 . - . ID=gene-O5C65_003934;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=O5C65_003934 DALFDA020000029.1 Protein Homology CDS 37882 38655 . - 0 ID=cds-HJH9173969.1;Parent=gene-O5C65_003934;Dbxref=NCBI_GP:HJH9173969.1;Name=HJH9173969.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=O5C65_003934;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=HJH9173969.1;transl_table=11 DALFDA020000029.1 tpg gene 38742 39632 . - . ID=gene-O5C65_003935;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=O5C65_003935 DALFDA020000029.1 Protein Homology CDS 38742 39632 . - 0 ID=cds-HJH9173970.1;Parent=gene-O5C65_003935;Dbxref=NCBI_GP:HJH9173970.1;Name=HJH9173970.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462754.1;locus_tag=O5C65_003935;product=phosphate ABC transporter permease PstA;protein_id=HJH9173970.1;transl_table=11 DALFDA020000029.1 tpg gene 39632 40591 . - . ID=gene-O5C65_003936;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=O5C65_003936 DALFDA020000029.1 Protein Homology CDS 39632 40591 . - 0 ID=cds-HJH9173971.1;Parent=gene-O5C65_003936;Dbxref=NCBI_GP:HJH9173971.1;Name=HJH9173971.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=O5C65_003936;product=phosphate ABC transporter permease PstC;protein_id=HJH9173971.1;transl_table=11 DALFDA020000029.1 tpg gene 40727 41767 . - . ID=gene-O5C65_003937;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=O5C65_003937 DALFDA020000029.1 Protein Homology CDS 40727 41767 . - 0 ID=cds-HJH9173972.1;Parent=gene-O5C65_003937;Dbxref=NCBI_GP:HJH9173972.1;Name=HJH9173972.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462756.1;locus_tag=O5C65_003937;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=HJH9173972.1;transl_table=11 DALFDA020000029.1 tpg gene 41934 43307 . - . ID=gene-O5C65_003938;Name=O5C65_003938;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003938 DALFDA020000029.1 Protein Homology CDS 41934 43307 . - 0 ID=cds-HJH9173973.1;Parent=gene-O5C65_003938;Dbxref=NCBI_GP:HJH9173973.1;Name=HJH9173973.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462757.1;locus_tag=O5C65_003938;product=fructose-specific PTS transporter subunit EIIC;protein_id=HJH9173973.1;transl_table=11 DALFDA020000029.1 tpg gene 43356 44174 . - . ID=gene-O5C65_003939;Name=O5C65_003939;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003939 DALFDA020000029.1 Protein Homology CDS 43356 44174 . - 0 ID=cds-HJH9173974.1;Parent=gene-O5C65_003939;Dbxref=NCBI_GP:HJH9173974.1;Name=HJH9173974.1;Ontology_term=GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462758.1;locus_tag=O5C65_003939;product=shikimate 5-dehydrogenase;protein_id=HJH9173974.1;transl_table=11 DALFDA020000029.1 tpg gene 44269 46026 . + . ID=gene-O5C65_003940;Name=O5C65_003940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003940 DALFDA020000029.1 Protein Homology CDS 44269 46026 . + 0 ID=cds-HJH9173975.1;Parent=gene-O5C65_003940;Dbxref=NCBI_GP:HJH9173975.1;Name=HJH9173975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462759.1;locus_tag=O5C65_003940;product=SgrR family transcriptional regulator;protein_id=HJH9173975.1;transl_table=11 DALFDA020000029.1 tpg gene 46176 48005 . - . ID=gene-O5C65_003941;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=O5C65_003941 DALFDA020000029.1 Protein Homology CDS 46176 48005 . - 0 ID=cds-HJH9173976.1;Parent=gene-O5C65_003941;Dbxref=NCBI_GP:HJH9173976.1;Name=HJH9173976.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=O5C65_003941;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=HJH9173976.1;transl_table=11 DALFDA020000029.1 tpg gene 48194 49564 . - . ID=gene-O5C65_003942;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=O5C65_003942 DALFDA020000029.1 Protein Homology CDS 48194 49564 . - 0 ID=cds-HJH9173977.1;Parent=gene-O5C65_003942;Dbxref=NCBI_GP:HJH9173977.1;Name=HJH9173977.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462761.1;locus_tag=O5C65_003942;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=HJH9173977.1;transl_table=11 DALFDA020000029.1 tpg gene 49884 50582 . - . ID=gene-O5C65_003943;Name=O5C65_003943;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003943 DALFDA020000029.1 Protein Homology CDS 49884 50582 . - 0 ID=cds-HJH9173978.1;Parent=gene-O5C65_003943;Dbxref=NCBI_GP:HJH9173978.1;Name=HJH9173978.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462762.1;locus_tag=O5C65_003943;product=Bax inhibitor-1/YccA family protein;protein_id=HJH9173978.1;transl_table=11 DALFDA020000029.1 tpg gene 50812 51231 . - . ID=gene-O5C65_003944;Name=O5C65_003944;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003944 DALFDA020000029.1 Protein Homology CDS 50812 51231 . - 0 ID=cds-HJH9173979.1;Parent=gene-O5C65_003944;Dbxref=NCBI_GP:HJH9173979.1;Name=HJH9173979.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=O5C65_003944;product=F0F1 ATP synthase subunit epsilon;protein_id=HJH9173979.1;transl_table=11 DALFDA020000029.1 tpg gene 51252 52634 . - . ID=gene-O5C65_003945;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=O5C65_003945 DALFDA020000029.1 Protein Homology CDS 51252 52634 . - 0 ID=cds-HJH9173980.1;Parent=gene-O5C65_003945;Dbxref=NCBI_GP:HJH9173980.1;Name=HJH9173980.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=O5C65_003945;product=F0F1 ATP synthase subunit beta;protein_id=HJH9173980.1;transl_table=11 DALFDA020000029.1 tpg gene 52661 53524 . - . ID=gene-O5C65_003946;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=O5C65_003946 DALFDA020000029.1 Protein Homology CDS 52661 53524 . - 0 ID=cds-HJH9173981.1;Parent=gene-O5C65_003946;Dbxref=NCBI_GP:HJH9173981.1;Name=HJH9173981.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=O5C65_003946;product=F0F1 ATP synthase subunit gamma;protein_id=HJH9173981.1;transl_table=11 DALFDA020000029.1 tpg gene 53575 55116 . - . ID=gene-O5C65_003947;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=O5C65_003947 DALFDA020000029.1 Protein Homology CDS 53575 55116 . - 0 ID=cds-HJH9173982.1;Parent=gene-O5C65_003947;Dbxref=NCBI_GP:HJH9173982.1;Name=HJH9173982.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=O5C65_003947;product=F0F1 ATP synthase subunit alpha;protein_id=HJH9173982.1;transl_table=11 DALFDA020000029.1 tpg gene 55129 55662 . - . ID=gene-O5C65_003948;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=O5C65_003948 DALFDA020000029.1 Protein Homology CDS 55129 55662 . - 0 ID=cds-HJH9173983.1;Parent=gene-O5C65_003948;Dbxref=NCBI_GP:HJH9173983.1;Name=HJH9173983.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=O5C65_003948;product=F0F1 ATP synthase subunit delta;protein_id=HJH9173983.1;transl_table=11 DALFDA020000029.1 tpg gene 55677 56147 . - . ID=gene-O5C65_003949;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=O5C65_003949 DALFDA020000029.1 Protein Homology CDS 55677 56147 . - 0 ID=cds-HJH9173984.1;Parent=gene-O5C65_003949;Dbxref=NCBI_GP:HJH9173984.1;Name=HJH9173984.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=O5C65_003949;product=F0F1 ATP synthase subunit B;protein_id=HJH9173984.1;transl_table=11 DALFDA020000029.1 tpg gene 56207 56446 . - . ID=gene-O5C65_003950;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=O5C65_003950 DALFDA020000029.1 Protein Homology CDS 56207 56446 . - 0 ID=cds-HJH9173985.1;Parent=gene-O5C65_003950;Dbxref=NCBI_GP:HJH9173985.1;Name=HJH9173985.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=O5C65_003950;product=F0F1 ATP synthase subunit C;protein_id=HJH9173985.1;transl_table=11 DALFDA020000029.1 tpg gene 56493 57308 . - . ID=gene-O5C65_003951;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=O5C65_003951 DALFDA020000029.1 Protein Homology CDS 56493 57308 . - 0 ID=cds-HJH9173986.1;Parent=gene-O5C65_003951;Dbxref=NCBI_GP:HJH9173986.1;Name=HJH9173986.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=O5C65_003951;product=F0F1 ATP synthase subunit A;protein_id=HJH9173986.1;transl_table=11 DALFDA020000029.1 tpg gene 57317 57697 . - . ID=gene-O5C65_003952;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=O5C65_003952 DALFDA020000029.1 Protein Homology CDS 57317 57697 . - 0 ID=cds-HJH9173987.1;Parent=gene-O5C65_003952;Dbxref=NCBI_GP:HJH9173987.1;Name=HJH9173987.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462771.1;locus_tag=O5C65_003952;product=F0F1 ATP synthase subunit I;protein_id=HJH9173987.1;transl_table=11 DALFDA020000029.1 tpg gene 58313 58936 . - . ID=gene-O5C65_003953;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=O5C65_003953 DALFDA020000029.1 Protein Homology CDS 58313 58936 . - 0 ID=cds-HJH9173988.1;Parent=gene-O5C65_003953;Dbxref=NCBI_GP:HJH9173988.1;Name=HJH9173988.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462772.3;locus_tag=O5C65_003953;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=HJH9173988.1;transl_table=11 DALFDA020000029.1 tpg gene 59039 60928 . - . ID=gene-O5C65_003954;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=O5C65_003954 DALFDA020000029.1 Protein Homology CDS 59039 60928 . - 0 ID=cds-HJH9173989.1;Parent=gene-O5C65_003954;Dbxref=NCBI_GP:HJH9173989.1;Name=HJH9173989.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=O5C65_003954;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=HJH9173989.1;transl_table=11 DALFDA020000029.1 tpg gene 61307 61750 . - . ID=gene-O5C65_003955;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=O5C65_003955 DALFDA020000029.1 Protein Homology CDS 61307 61750 . - 0 ID=cds-HJH9173990.1;Parent=gene-O5C65_003955;Dbxref=NCBI_GP:HJH9173990.1;Name=HJH9173990.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462774.1;locus_tag=O5C65_003955;product=FMN-binding protein MioC;protein_id=HJH9173990.1;transl_table=11 DALFDA020000029.1 tpg gene 61840 62298 . - . ID=gene-O5C65_003956;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=O5C65_003956 DALFDA020000029.1 Protein Homology CDS 61840 62298 . - 0 ID=cds-HJH9173991.1;Parent=gene-O5C65_003956;Dbxref=NCBI_GP:HJH9173991.1;Name=HJH9173991.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462775.1;locus_tag=O5C65_003956;product=transcriptional regulator AsnC;protein_id=HJH9173991.1;transl_table=11 DALFDA020000029.1 tpg gene 62449 63441 . + . ID=gene-O5C65_003957;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=O5C65_003957 DALFDA020000029.1 Protein Homology CDS 62449 63441 . + 0 ID=cds-HJH9173992.1;Parent=gene-O5C65_003957;Dbxref=NCBI_GP:HJH9173992.1;Name=HJH9173992.1;Ontology_term=GO:0006529,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462776.1;locus_tag=O5C65_003957;product=aspartate--ammonia ligase;protein_id=HJH9173992.1;transl_table=11 DALFDA020000029.1 tpg gene 63446 64897 . - . ID=gene-O5C65_003958;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=O5C65_003958 DALFDA020000029.1 Protein Homology CDS 63446 64897 . - 0 ID=cds-HJH9173993.1;Parent=gene-O5C65_003958;Dbxref=NCBI_GP:HJH9173993.1;Name=HJH9173993.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=O5C65_003958;product=ATPase RavA stimulator ViaA;protein_id=HJH9173993.1;transl_table=11 DALFDA020000029.1 tpg gene 64891 66387 . - . ID=gene-O5C65_003959;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=O5C65_003959 DALFDA020000029.1 Protein Homology CDS 64891 66387 . - 0 ID=cds-HJH9173994.1;Parent=gene-O5C65_003959;Dbxref=NCBI_GP:HJH9173994.1;Name=HJH9173994.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462778.1;locus_tag=O5C65_003959;product=ATPase RavA;protein_id=HJH9173994.1;transl_table=11 DALFDA020000029.1 tpg gene 66735 68603 . + . ID=gene-O5C65_003960;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=O5C65_003960 DALFDA020000029.1 Protein Homology CDS 66735 68603 . + 0 ID=cds-HJH9173995.1;Parent=gene-O5C65_003960;Dbxref=NCBI_GP:HJH9173995.1;Name=HJH9173995.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=O5C65_003960;product=low affinity potassium transporter Kup;protein_id=HJH9173995.1;transl_table=11 DALFDA020000029.1 tpg gene 68800 69219 . + . ID=gene-O5C65_003961;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=O5C65_003961 DALFDA020000029.1 Protein Homology CDS 68800 69219 . + 0 ID=cds-HJH9173996.1;Parent=gene-O5C65_003961;Dbxref=NCBI_GP:HJH9173996.1;Name=HJH9173996.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462780.1;locus_tag=O5C65_003961;product=D-ribose pyranase;protein_id=HJH9173996.1;transl_table=11 DALFDA020000029.1 tpg gene 69227 70732 . + . ID=gene-O5C65_003962;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=O5C65_003962 DALFDA020000029.1 Protein Homology CDS 69227 70732 . + 0 ID=cds-HJH9173997.1;Parent=gene-O5C65_003962;Dbxref=NCBI_GP:HJH9173997.1;Name=HJH9173997.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462781.1;locus_tag=O5C65_003962;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=HJH9173997.1;transl_table=11 DALFDA020000029.1 tpg gene 70738 71703 . + . ID=gene-O5C65_003963;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=O5C65_003963 DALFDA020000029.1 Protein Homology CDS 70738 71703 . + 0 ID=cds-HJH9173998.1;Parent=gene-O5C65_003963;Dbxref=NCBI_GP:HJH9173998.1;Name=HJH9173998.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=O5C65_003963;product=ribose ABC transporter permease;protein_id=HJH9173998.1;transl_table=11 DALFDA020000029.1 tpg gene 71728 72618 . + . ID=gene-O5C65_003964;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=O5C65_003964 DALFDA020000029.1 Protein Homology CDS 71728 72618 . + 0 ID=cds-HJH9173999.1;Parent=gene-O5C65_003964;Dbxref=NCBI_GP:HJH9173999.1;Name=HJH9173999.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462783.1;locus_tag=O5C65_003964;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=HJH9173999.1;transl_table=11 DALFDA020000029.1 tpg gene 72751 73680 . + . ID=gene-O5C65_003965;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=O5C65_003965 DALFDA020000029.1 Protein Homology CDS 72751 73680 . + 0 ID=cds-HJH9174000.1;Parent=gene-O5C65_003965;Dbxref=NCBI_GP:HJH9174000.1;Name=HJH9174000.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462784.1;locus_tag=O5C65_003965;product=ribokinase;protein_id=HJH9174000.1;transl_table=11 DALFDA020000029.1 tpg gene 73684 74682 . + . ID=gene-O5C65_003966;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=O5C65_003966 DALFDA020000029.1 Protein Homology CDS 73684 74682 . + 0 ID=cds-HJH9174001.1;Parent=gene-O5C65_003966;Dbxref=NCBI_GP:HJH9174001.1;Name=HJH9174001.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462785.1;locus_tag=O5C65_003966;product=ribose operon transcriptional repressor RbsR;protein_id=HJH9174001.1;transl_table=11 DALFDA020000029.1 tpg gene 74648 76075 . - . ID=gene-O5C65_003967;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=O5C65_003967 DALFDA020000029.1 Protein Homology CDS 74648 76075 . - 0 ID=cds-HJH9174002.1;Parent=gene-O5C65_003967;Dbxref=NCBI_GP:HJH9174002.1;Name=HJH9174002.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462786.1;locus_tag=O5C65_003967;product=multidrug transporter subunit MdtD;protein_id=HJH9174002.1;transl_table=11 DALFDA020000029.1 tpg gene 76087 76791 . - . ID=gene-O5C65_003968;Name=O5C65_003968;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003968 DALFDA020000029.1 Protein Homology CDS 76087 76791 . - 0 ID=cds-HJH9174003.1;Parent=gene-O5C65_003968;Dbxref=NCBI_GP:HJH9174003.1;Name=HJH9174003.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462787.1;locus_tag=O5C65_003968;product=FadR/GntR family transcriptional regulator;protein_id=HJH9174003.1;transl_table=11 ##sequence-region DALFDA020000030.1 1 70193 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000030.1 tpg region 1 70193 . + . ID=DALFDA020000030.1:1..70193;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000030.1 tpg gene 161 236 . - . ID=gene-O5C65_003969;Name=O5C65_003969;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_003969 DALFDA020000030.1 tRNAscan-SE tRNA 161 236 . - . ID=rna-O5C65_003969;Parent=gene-O5C65_003969;anticodon=(pos:complement(201..203));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003969;product=tRNA-Lys DALFDA020000030.1 tRNAscan-SE exon 161 236 . - . ID=exon-O5C65_003969-1;Parent=rna-O5C65_003969;anticodon=(pos:complement(201..203));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003969;product=tRNA-Lys DALFDA020000030.1 tpg gene 379 454 . - . ID=gene-O5C65_003970;Name=O5C65_003970;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_003970 DALFDA020000030.1 tRNAscan-SE tRNA 379 454 . - . ID=rna-O5C65_003970;Parent=gene-O5C65_003970;anticodon=(pos:complement(419..421));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003970;product=tRNA-Lys DALFDA020000030.1 tRNAscan-SE exon 379 454 . - . ID=exon-O5C65_003970-1;Parent=rna-O5C65_003970;anticodon=(pos:complement(419..421));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003970;product=tRNA-Lys DALFDA020000030.1 tpg gene 458 533 . - . ID=gene-O5C65_003971;Name=O5C65_003971;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_003971 DALFDA020000030.1 tRNAscan-SE tRNA 458 533 . - . ID=rna-O5C65_003971;Parent=gene-O5C65_003971;anticodon=(pos:complement(498..500));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003971;product=tRNA-Val DALFDA020000030.1 tRNAscan-SE exon 458 533 . - . ID=exon-O5C65_003971-1;Parent=rna-O5C65_003971;anticodon=(pos:complement(498..500));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003971;product=tRNA-Val DALFDA020000030.1 tpg gene 670 745 . - . ID=gene-O5C65_003972;Name=O5C65_003972;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_003972 DALFDA020000030.1 tRNAscan-SE tRNA 670 745 . - . ID=rna-O5C65_003972;Parent=gene-O5C65_003972;anticodon=(pos:complement(710..712));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003972;product=tRNA-Lys DALFDA020000030.1 tRNAscan-SE exon 670 745 . - . ID=exon-O5C65_003972-1;Parent=rna-O5C65_003972;anticodon=(pos:complement(710..712));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_003972;product=tRNA-Lys DALFDA020000030.1 tpg gene 910 1698 . - . ID=gene-O5C65_003973;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=O5C65_003973 DALFDA020000030.1 Protein Homology CDS 910 1698 . - 0 ID=cds-HJH9174004.1;Parent=gene-O5C65_003973;Dbxref=NCBI_GP:HJH9174004.1;Name=HJH9174004.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459735.1;locus_tag=O5C65_003973;product=cell division protein CpoB;protein_id=HJH9174004.1;transl_table=11 DALFDA020000030.1 tpg gene 1708 2232 . - . ID=gene-O5C65_003974;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=O5C65_003974 DALFDA020000030.1 Protein Homology CDS 1708 2232 . - 0 ID=cds-HJH9174005.1;Parent=gene-O5C65_003974;Dbxref=NCBI_GP:HJH9174005.1;Name=HJH9174005.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459734.1;locus_tag=O5C65_003974;product=peptidoglycan-associated lipoprotein Pal;protein_id=HJH9174005.1;transl_table=11 DALFDA020000030.1 tpg gene 2267 3559 . - . ID=gene-O5C65_003975;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=O5C65_003975 DALFDA020000030.1 Protein Homology CDS 2267 3559 . - 0 ID=cds-HJH9174006.1;Parent=gene-O5C65_003975;Dbxref=NCBI_GP:HJH9174006.1;Name=HJH9174006.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=O5C65_003975;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=HJH9174006.1;transl_table=11 DALFDA020000030.1 tpg gene 3683 4861 . - . ID=gene-O5C65_003976;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=O5C65_003976 DALFDA020000030.1 Protein Homology CDS 3683 4861 . - 0 ID=cds-HJH9174007.1;Parent=gene-O5C65_003976;Dbxref=NCBI_GP:HJH9174007.1;Name=HJH9174007.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459732.1;locus_tag=O5C65_003976;product=cell envelope integrity protein TolA;protein_id=HJH9174007.1;transl_table=11 DALFDA020000030.1 tpg gene 4926 5354 . - . ID=gene-O5C65_003977;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=O5C65_003977 DALFDA020000030.1 Protein Homology CDS 4926 5354 . - 0 ID=cds-HJH9174008.1;Parent=gene-O5C65_003977;Dbxref=NCBI_GP:HJH9174008.1;Name=HJH9174008.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=O5C65_003977;product=colicin uptake protein TolR;protein_id=HJH9174008.1;transl_table=11 DALFDA020000030.1 tpg gene 5358 6050 . - . ID=gene-O5C65_003978;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=O5C65_003978 DALFDA020000030.1 Protein Homology CDS 5358 6050 . - 0 ID=cds-HJH9174009.1;Parent=gene-O5C65_003978;Dbxref=NCBI_GP:HJH9174009.1;Name=HJH9174009.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459730.1;locus_tag=O5C65_003978;product=Tol-Pal system protein TolQ;protein_id=HJH9174009.1;transl_table=11 DALFDA020000030.1 tpg gene 6047 6451 . - . ID=gene-O5C65_003979;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=O5C65_003979 DALFDA020000030.1 Protein Homology CDS 6047 6451 . - 0 ID=cds-HJH9174010.1;Parent=gene-O5C65_003979;Dbxref=NCBI_GP:HJH9174010.1;Name=HJH9174010.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459729.1;locus_tag=O5C65_003979;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=HJH9174010.1;transl_table=11 DALFDA020000030.1 tpg gene 6680 6973 . - . ID=gene-O5C65_003980;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=O5C65_003980 DALFDA020000030.1 Protein Homology CDS 6680 6973 . - 0 ID=cds-HJH9174011.1;Parent=gene-O5C65_003980;Dbxref=NCBI_GP:HJH9174011.1;Name=HJH9174011.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006712473.1;locus_tag=O5C65_003980;product=cyd operon protein YbgE;protein_id=HJH9174011.1;transl_table=11 DALFDA020000030.1 tpg gene 6973 7086 . - . ID=gene-O5C65_003981;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=O5C65_003981 DALFDA020000030.1 Protein Homology CDS 6973 7086 . - 0 ID=cds-HJH9174012.1;Parent=gene-O5C65_003981;Dbxref=NCBI_GP:HJH9174012.1;Name=HJH9174012.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459727.1;locus_tag=O5C65_003981;product=cytochrome bd-I oxidase subunit CydX;protein_id=HJH9174012.1;transl_table=11 DALFDA020000030.1 tpg gene 7101 8240 . - . ID=gene-O5C65_003982;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=O5C65_003982 DALFDA020000030.1 Protein Homology CDS 7101 8240 . - 0 ID=cds-HJH9174013.1;Parent=gene-O5C65_003982;Dbxref=NCBI_GP:HJH9174013.1;Name=HJH9174013.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=O5C65_003982;product=cytochrome d ubiquinol oxidase subunit II;protein_id=HJH9174013.1;transl_table=11 DALFDA020000030.1 tpg gene 8256 9824 . - . ID=gene-O5C65_003983;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=O5C65_003983 DALFDA020000030.1 Protein Homology CDS 8256 9824 . - 0 ID=cds-HJH9174014.1;Parent=gene-O5C65_003983;Dbxref=NCBI_GP:HJH9174014.1;Name=HJH9174014.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459725.1;locus_tag=O5C65_003983;product=cytochrome ubiquinol oxidase subunit I;protein_id=HJH9174014.1;transl_table=11 DALFDA020000030.1 tpg gene 11407 12276 . - . ID=gene-O5C65_003984;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=O5C65_003984 DALFDA020000030.1 Protein Homology CDS 11407 12276 . - 0 ID=cds-HJH9174015.1;Parent=gene-O5C65_003984;Dbxref=NCBI_GP:HJH9174015.1;Name=HJH9174015.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459724.1;locus_tag=O5C65_003984;product=succinate--CoA ligase subunit alpha;protein_id=HJH9174015.1;transl_table=11 DALFDA020000030.1 tpg gene 12276 13442 . - . ID=gene-O5C65_003985;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=O5C65_003985 DALFDA020000030.1 Protein Homology CDS 12276 13442 . - 0 ID=cds-HJH9174016.1;Parent=gene-O5C65_003985;Dbxref=NCBI_GP:HJH9174016.1;Name=HJH9174016.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=O5C65_003985;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=HJH9174016.1;transl_table=11 DALFDA020000030.1 tpg gene 13584 14792 . - . ID=gene-O5C65_003986;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=O5C65_003986 DALFDA020000030.1 Protein Homology CDS 13584 14792 . - 0 ID=cds-HJH9174017.1;Parent=gene-O5C65_003986;Dbxref=NCBI_GP:HJH9174017.1;Name=HJH9174017.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459722.1;locus_tag=O5C65_003986;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=HJH9174017.1;transl_table=11 DALFDA020000030.1 tpg gene 14807 17608 . - . ID=gene-O5C65_003987;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=O5C65_003987 DALFDA020000030.1 Protein Homology CDS 14807 17608 . - 0 ID=cds-HJH9174018.1;Parent=gene-O5C65_003987;Dbxref=NCBI_GP:HJH9174018.1;Name=HJH9174018.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459721.1;locus_tag=O5C65_003987;product=2-oxoglutarate dehydrogenase E1 component;protein_id=HJH9174018.1;transl_table=11 DALFDA020000030.1 tpg gene 18134 18850 . - . ID=gene-O5C65_003988;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=O5C65_003988 DALFDA020000030.1 Protein Homology CDS 18134 18850 . - 0 ID=cds-HJH9174019.1;Parent=gene-O5C65_003988;Dbxref=NCBI_GP:HJH9174019.1;Name=HJH9174019.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=O5C65_003988;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=HJH9174019.1;transl_table=11 DALFDA020000030.1 tpg gene 18867 20633 . - . ID=gene-O5C65_003989;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=O5C65_003989 DALFDA020000030.1 Protein Homology CDS 18867 20633 . - 0 ID=cds-HJH9174020.1;Parent=gene-O5C65_003989;Dbxref=NCBI_GP:HJH9174020.1;Name=HJH9174020.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=O5C65_003989;product=succinate dehydrogenase flavoprotein subunit;protein_id=HJH9174020.1;transl_table=11 DALFDA020000030.1 tpg gene 20633 20980 . - . ID=gene-O5C65_003990;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=O5C65_003990 DALFDA020000030.1 Protein Homology CDS 20633 20980 . - 0 ID=cds-HJH9174021.1;Parent=gene-O5C65_003990;Dbxref=NCBI_GP:HJH9174021.1;Name=HJH9174021.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1;locus_tag=O5C65_003990;product=succinate dehydrogenase membrane anchor subunit;protein_id=HJH9174021.1;transl_table=11 DALFDA020000030.1 tpg gene 20974 21378 . - . ID=gene-O5C65_003991;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=O5C65_003991 DALFDA020000030.1 Protein Homology CDS 20974 21378 . - 0 ID=cds-HJH9174022.1;Parent=gene-O5C65_003991;Dbxref=NCBI_GP:HJH9174022.1;Name=HJH9174022.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=O5C65_003991;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=HJH9174022.1;transl_table=11 DALFDA020000030.1 tpg gene 21761 21892 . + . ID=gene-O5C65_003992;Name=O5C65_003992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003992 DALFDA020000030.1 Protein Homology CDS 21761 21892 . + 0 ID=cds-HJH9174023.1;Parent=gene-O5C65_003992;Dbxref=NCBI_GP:HJH9174023.1;Name=HJH9174023.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049035.1;locus_tag=O5C65_003992;product=hypothetical protein;protein_id=HJH9174023.1;transl_table=11 DALFDA020000030.1 tpg gene 22118 23401 . + . ID=gene-O5C65_003993;Name=O5C65_003993;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003993 DALFDA020000030.1 Protein Homology CDS 22118 23401 . + 0 ID=cds-HJH9174024.1;Parent=gene-O5C65_003993;Dbxref=NCBI_GP:HJH9174024.1;Name=HJH9174024.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459715.1;locus_tag=O5C65_003993;product=citrate synthase;protein_id=HJH9174024.1;transl_table=11 DALFDA020000030.1 tpg gene 23538 24584 . + . ID=gene-O5C65_003994;Name=O5C65_003994;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003994 DALFDA020000030.1 Protein Homology CDS 23538 24584 . + 0 ID=cds-HJH9174025.1;Parent=gene-O5C65_003994;Dbxref=NCBI_GP:HJH9174025.1;Name=HJH9174025.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459714.1;locus_tag=O5C65_003994;product=AbrB family transcriptional regulator;protein_id=HJH9174025.1;transl_table=11 DALFDA020000030.1 tpg gene 24639 25430 . - . ID=gene-O5C65_003995;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=O5C65_003995 DALFDA020000030.1 Protein Homology CDS 24639 25430 . - 0 ID=cds-HJH9174026.1;Parent=gene-O5C65_003995;Dbxref=NCBI_GP:HJH9174026.1;Name=HJH9174026.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459713.1;locus_tag=O5C65_003995;product=endonuclease VIII;protein_id=HJH9174026.1;transl_table=11 DALFDA020000030.1 tpg gene 25479 25616 . - . ID=gene-O5C65_003996;Name=O5C65_003996;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003996 DALFDA020000030.1 Protein Homology CDS 25479 25616 . - 0 ID=cds-HJH9174027.1;Parent=gene-O5C65_003996;Dbxref=NCBI_GP:HJH9174027.1;Name=HJH9174027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459712.1;locus_tag=O5C65_003996;product=hypothetical protein;protein_id=HJH9174027.1;transl_table=11 DALFDA020000030.1 tpg gene 25684 27579 . - . ID=gene-O5C65_003997;Name=O5C65_003997;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003997 DALFDA020000030.1 Protein Homology CDS 25684 27579 . - 0 ID=cds-HJH9174028.1;Parent=gene-O5C65_003997;Dbxref=NCBI_GP:HJH9174028.1;Name=HJH9174028.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459711.1;locus_tag=O5C65_003997;product=HAD family hydrolase;protein_id=HJH9174028.1;transl_table=11 DALFDA020000030.1 tpg gene 27637 28470 . - . ID=gene-O5C65_003998;Name=O5C65_003998;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003998 DALFDA020000030.1 Protein Homology CDS 27637 28470 . - 0 ID=cds-HJH9174029.1;Parent=gene-O5C65_003998;Dbxref=NCBI_GP:HJH9174029.1;Name=HJH9174029.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459710.1;locus_tag=O5C65_003998;product=glycosyltransferase family A protein;protein_id=HJH9174029.1;transl_table=11 DALFDA020000030.1 tpg gene 28663 30441 . - . ID=gene-O5C65_003999;Name=O5C65_003999;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_003999 DALFDA020000030.1 Protein Homology CDS 28663 30441 . - 0 ID=cds-HJH9174030.1;Parent=gene-O5C65_003999;Dbxref=NCBI_GP:HJH9174030.1;Name=HJH9174030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459709.1;locus_tag=O5C65_003999;product=glycosyltransferase;protein_id=HJH9174030.1;transl_table=11 DALFDA020000030.1 tpg gene 30535 31245 . - . ID=gene-O5C65_004000;Name=O5C65_004000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004000 DALFDA020000030.1 Protein Homology CDS 30535 31245 . - 0 ID=cds-HJH9174031.1;Parent=gene-O5C65_004000;Dbxref=NCBI_GP:HJH9174031.1;Name=HJH9174031.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459708.1;locus_tag=O5C65_004000;product=ABC transporter ATP-binding protein;protein_id=HJH9174031.1;transl_table=11 DALFDA020000030.1 tpg gene 31249 32019 . - . ID=gene-O5C65_004001;Name=O5C65_004001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004001 DALFDA020000030.1 Protein Homology CDS 31249 32019 . - 0 ID=cds-HJH9174032.1;Parent=gene-O5C65_004001;Dbxref=NCBI_GP:HJH9174032.1;Name=HJH9174032.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459707.1;locus_tag=O5C65_004001;product=ABC transporter permease;protein_id=HJH9174032.1;transl_table=11 DALFDA020000030.1 tpg gene 32148 33281 . - . ID=gene-O5C65_004002;Name=O5C65_004002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004002 DALFDA020000030.1 Protein Homology CDS 32148 33281 . - 0 ID=cds-HJH9174033.1;Parent=gene-O5C65_004002;Dbxref=NCBI_GP:HJH9174033.1;Name=HJH9174033.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459706.1;locus_tag=O5C65_004002;product=glycosyltransferase family 4 protein;protein_id=HJH9174033.1;transl_table=11 DALFDA020000030.1 tpg gene 33294 34190 . - . ID=gene-O5C65_004003;Name=O5C65_004003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004003 DALFDA020000030.1 Protein Homology CDS 33294 34190 . - 0 ID=cds-HJH9174034.1;Parent=gene-O5C65_004003;Dbxref=NCBI_GP:HJH9174034.1;Name=HJH9174034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459705.1;locus_tag=O5C65_004003;product=glycosyltransferase;protein_id=HJH9174034.1;transl_table=11 DALFDA020000030.1 tpg gene 34187 35338 . - . ID=gene-O5C65_004004;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=O5C65_004004 DALFDA020000030.1 Protein Homology CDS 34187 35338 . - 0 ID=cds-HJH9174035.1;Parent=gene-O5C65_004004;Dbxref=NCBI_GP:HJH9174035.1;Name=HJH9174035.1;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459704.1;locus_tag=O5C65_004004;product=UDP-galactopyranose mutase;protein_id=HJH9174035.1;transl_table=11 DALFDA020000030.1 tpg gene 35624 36364 . - . ID=gene-O5C65_004005;Name=O5C65_004005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004005 DALFDA020000030.1 Protein Homology CDS 35624 36364 . - 0 ID=cds-HJH9174036.1;Parent=gene-O5C65_004005;Dbxref=NCBI_GP:HJH9174036.1;Name=HJH9174036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459703.1;locus_tag=O5C65_004005;product=transport protein;protein_id=HJH9174036.1;transl_table=11 DALFDA020000030.1 tpg gene 36366 36701 . - . ID=gene-O5C65_004006;Name=O5C65_004006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004006 DALFDA020000030.1 Protein Homology CDS 36366 36701 . - 0 ID=cds-HJH9174037.1;Parent=gene-O5C65_004006;Dbxref=NCBI_GP:HJH9174037.1;Name=HJH9174037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459702.1;locus_tag=O5C65_004006;product=hypothetical protein;protein_id=HJH9174037.1;transl_table=11 DALFDA020000030.1 tpg gene 37161 37727 . - . ID=gene-O5C65_004007;Name=O5C65_004007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004007 DALFDA020000030.1 Protein Homology CDS 37161 37727 . - 0 ID=cds-HJH9174038.1;Parent=gene-O5C65_004007;Dbxref=NCBI_GP:HJH9174038.1;Name=HJH9174038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459701.1;locus_tag=O5C65_004007;product=tyrosine-type DNA invertase;protein_id=HJH9174038.1;transl_table=11 DALFDA020000030.1 tpg gene 37777 37917 . - . ID=gene-O5C65_004008;Name=O5C65_004008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004008 DALFDA020000030.1 Protein Homology CDS 37777 37917 . - 0 ID=cds-HJH9174039.1;Parent=gene-O5C65_004008;Dbxref=NCBI_GP:HJH9174039.1;Name=HJH9174039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534230.1;locus_tag=O5C65_004008;product=hypothetical protein;protein_id=HJH9174039.1;transl_table=11 DALFDA020000030.1 tpg gene 38241 38975 . - . ID=gene-O5C65_004009;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=O5C65_004009 DALFDA020000030.1 Protein Homology CDS 38241 38975 . - 0 ID=cds-HJH9174040.1;Parent=gene-O5C65_004009;Dbxref=NCBI_GP:HJH9174040.1;Name=HJH9174040.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459699.1;locus_tag=O5C65_004009;product=5-oxoprolinase subunit PxpA;protein_id=HJH9174040.1;transl_table=11 DALFDA020000030.1 tpg gene 38965 39897 . - . ID=gene-O5C65_004010;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=O5C65_004010 DALFDA020000030.1 Protein Homology CDS 38965 39897 . - 0 ID=cds-HJH9174041.1;Parent=gene-O5C65_004010;Dbxref=NCBI_GP:HJH9174041.1;Name=HJH9174041.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpC;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459698.1;locus_tag=O5C65_004010;product=5-oxoprolinase subunit PxpC;protein_id=HJH9174041.1;transl_table=11 DALFDA020000030.1 tpg gene 39891 40547 . - . ID=gene-O5C65_004011;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=O5C65_004011 DALFDA020000030.1 Protein Homology CDS 39891 40547 . - 0 ID=cds-HJH9174042.1;Parent=gene-O5C65_004011;Dbxref=NCBI_GP:HJH9174042.1;Name=HJH9174042.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459697.1;locus_tag=O5C65_004011;product=5-oxoprolinase subunit PxpB;protein_id=HJH9174042.1;transl_table=11 DALFDA020000030.1 tpg gene 40563 41306 . - . ID=gene-O5C65_004012;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=O5C65_004012 DALFDA020000030.1 Protein Homology CDS 40563 41306 . - 0 ID=cds-HJH9174043.1;Parent=gene-O5C65_004012;Dbxref=NCBI_GP:HJH9174043.1;Name=HJH9174043.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=O5C65_004012;product=radiation resistance protein YbgI;protein_id=HJH9174043.1;transl_table=11 DALFDA020000030.1 tpg gene 41635 43116 . + . ID=gene-O5C65_004013;Name=O5C65_004013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004013 DALFDA020000030.1 Protein Homology CDS 41635 43116 . + 0 ID=cds-HJH9174044.1;Parent=gene-O5C65_004013;Dbxref=NCBI_GP:HJH9174044.1;Name=HJH9174044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459695.1;locus_tag=O5C65_004013;product=MFS transporter;protein_id=HJH9174044.1;transl_table=11 DALFDA020000030.1 tpg gene 43155 44576 . - . ID=gene-O5C65_004014;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=O5C65_004014 DALFDA020000030.1 Protein Homology CDS 43155 44576 . - 0 ID=cds-HJH9174045.1;Parent=gene-O5C65_004014;Dbxref=NCBI_GP:HJH9174045.1;Name=HJH9174045.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459694.1;locus_tag=O5C65_004014;product=deoxyribodipyrimidine photo-lyase;protein_id=HJH9174045.1;transl_table=11 DALFDA020000030.1 tpg gene 44687 44893 . - . ID=gene-O5C65_004015;Name=O5C65_004015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004015 DALFDA020000030.1 Protein Homology CDS 44687 44893 . - 0 ID=cds-HJH9174046.1;Parent=gene-O5C65_004015;Dbxref=NCBI_GP:HJH9174046.1;Name=HJH9174046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459693.1;locus_tag=O5C65_004015;product=YbfA family protein;protein_id=HJH9174046.1;transl_table=11 DALFDA020000030.1 tpg gene 45230 45319 . + . ID=gene-O5C65_004016;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=O5C65_004016 DALFDA020000030.1 Protein Homology CDS 45230 45319 . + 0 ID=cds-HJH9174047.1;Parent=gene-O5C65_004016;Dbxref=NCBI_GP:HJH9174047.1;Name=HJH9174047.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459692.1;locus_tag=O5C65_004016;product=K(+)-transporting ATPase subunit F;protein_id=HJH9174047.1;transl_table=11 DALFDA020000030.1 tpg gene 45319 46998 . + . ID=gene-O5C65_004017;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=O5C65_004017 DALFDA020000030.1 Protein Homology CDS 45319 46998 . + 0 ID=cds-HJH9174048.1;Parent=gene-O5C65_004017;Dbxref=NCBI_GP:HJH9174048.1;Name=HJH9174048.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459691.1;locus_tag=O5C65_004017;product=potassium-transporting ATPase subunit KdpA;protein_id=HJH9174048.1;transl_table=11 DALFDA020000030.1 tpg gene 47019 49067 . + . ID=gene-O5C65_004018;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=O5C65_004018 DALFDA020000030.1 Protein Homology CDS 47019 49067 . + 0 ID=cds-HJH9174049.1;Parent=gene-O5C65_004018;Dbxref=NCBI_GP:HJH9174049.1;Name=HJH9174049.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459690.1;locus_tag=O5C65_004018;product=potassium-transporting ATPase subunit KdpB;protein_id=HJH9174049.1;transl_table=11 DALFDA020000030.1 tpg gene 49076 49660 . + . ID=gene-O5C65_004019;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=O5C65_004019 DALFDA020000030.1 Protein Homology CDS 49076 49660 . + 0 ID=cds-HJH9174050.1;Parent=gene-O5C65_004019;Dbxref=NCBI_GP:HJH9174050.1;Name=HJH9174050.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459689.1;locus_tag=O5C65_004019;product=potassium-transporting ATPase subunit KdpC;protein_id=HJH9174050.1;transl_table=11 DALFDA020000030.1 tpg gene 49657 52341 . + . ID=gene-O5C65_004020;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=O5C65_004020 DALFDA020000030.1 Protein Homology CDS 49657 52341 . + 0 ID=cds-HJH9174051.1;Parent=gene-O5C65_004020;Dbxref=NCBI_GP:HJH9174051.1;Name=HJH9174051.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459688.1;locus_tag=O5C65_004020;product=two-component system sensor histidine kinase KdpD;protein_id=HJH9174051.1;transl_table=11 DALFDA020000030.1 tpg gene 52338 53015 . + . ID=gene-O5C65_004021;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=O5C65_004021 DALFDA020000030.1 Protein Homology CDS 52338 53015 . + 0 ID=cds-HJH9174052.1;Parent=gene-O5C65_004021;Dbxref=NCBI_GP:HJH9174052.1;Name=HJH9174052.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459687.1;locus_tag=O5C65_004021;product=two-component system response regulator KdpE;protein_id=HJH9174052.1;transl_table=11 DALFDA020000030.1 tpg gene 53293 53397 . + . ID=gene-O5C65_004022;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=O5C65_004022 DALFDA020000030.1 Protein Homology CDS 53293 53397 . + 0 ID=cds-HJH9174053.1;Parent=gene-O5C65_004022;Dbxref=NCBI_GP:HJH9174053.1;Name=HJH9174053.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=O5C65_004022;product=leader peptide SpeFL;protein_id=HJH9174053.1;transl_table=11 DALFDA020000030.1 tpg gene 53777 55975 . + . ID=gene-O5C65_004023;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=O5C65_004023 DALFDA020000030.1 Protein Homology CDS 53777 55975 . + 0 ID=cds-HJH9174054.1;Parent=gene-O5C65_004023;Dbxref=NCBI_GP:HJH9174054.1;Name=HJH9174054.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459686.1;locus_tag=O5C65_004023;product=ornithine decarboxylase SpeF;protein_id=HJH9174054.1;transl_table=11 DALFDA020000030.1 tpg gene 55972 57291 . + . ID=gene-O5C65_004024;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=O5C65_004024 DALFDA020000030.1 Protein Homology CDS 55972 57291 . + 0 ID=cds-HJH9174055.1;Parent=gene-O5C65_004024;Dbxref=NCBI_GP:HJH9174055.1;Name=HJH9174055.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459685.1;locus_tag=O5C65_004024;product=putrescine-ornithine antiporter;protein_id=HJH9174055.1;transl_table=11 DALFDA020000030.1 tpg gene 57356 57841 . + . ID=gene-O5C65_004025;Name=O5C65_004025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004025 DALFDA020000030.1 Protein Homology CDS 57356 57841 . + 0 ID=cds-HJH9174056.1;Parent=gene-O5C65_004025;Dbxref=NCBI_GP:HJH9174056.1;Name=HJH9174056.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459684.1;locus_tag=O5C65_004025;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=HJH9174056.1;transl_table=11 DALFDA020000030.1 tpg gene 57956 59596 . - . ID=gene-O5C65_004026;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=O5C65_004026 DALFDA020000030.1 Protein Homology CDS 57956 59596 . - 0 ID=cds-HJH9174057.1;Parent=gene-O5C65_004026;Dbxref=NCBI_GP:HJH9174057.1;Name=HJH9174057.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459683.1;locus_tag=O5C65_004026;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=HJH9174057.1;transl_table=11 DALFDA020000030.1 tpg gene 59621 60163 . - . ID=gene-O5C65_004027;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=O5C65_004027 DALFDA020000030.1 Protein Homology CDS 59621 60163 . - 0 ID=cds-HJH9174058.1;Parent=gene-O5C65_004027;Dbxref=NCBI_GP:HJH9174058.1;Name=HJH9174058.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459682.1;locus_tag=O5C65_004027;product=replication initiation negative regulator SeqA;protein_id=HJH9174058.1;transl_table=11 DALFDA020000030.1 tpg gene 60348 61118 . + . ID=gene-O5C65_004028;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=O5C65_004028 DALFDA020000030.1 Protein Homology CDS 60348 61118 . + 0 ID=cds-HJH9174059.1;Parent=gene-O5C65_004028;Dbxref=NCBI_GP:HJH9174059.1;Name=HJH9174059.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459681.1;locus_tag=O5C65_004028;product=esterase;protein_id=HJH9174059.1;transl_table=11 DALFDA020000030.1 tpg gene 61252 61545 . + . ID=gene-O5C65_004029;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=O5C65_004029 DALFDA020000030.1 Protein Homology CDS 61252 61545 . + 0 ID=cds-HJH9174060.1;Parent=gene-O5C65_004029;Dbxref=NCBI_GP:HJH9174060.1;Name=HJH9174060.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459680.1;locus_tag=O5C65_004029;product=LexA regulated protein;protein_id=HJH9174060.1;transl_table=11 DALFDA020000030.1 tpg gene 61696 62226 . + . ID=gene-O5C65_004030;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=O5C65_004030 DALFDA020000030.1 Protein Homology CDS 61696 62226 . + 0 ID=cds-HJH9174061.1;Parent=gene-O5C65_004030;Dbxref=NCBI_GP:HJH9174061.1;Name=HJH9174061.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459679.1;locus_tag=O5C65_004030;product=flavodoxin FldA;protein_id=HJH9174061.1;transl_table=11 DALFDA020000030.1 tpg pseudogene 62430 62515 . + . ID=gene-O5C65_004031;Name=O5C65_004031;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004031;pseudo=true DALFDA020000030.1 Protein Homology CDS 62430 62515 . + 0 ID=cds-O5C65_004031;Parent=gene-O5C65_004031;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=O5C65_004031;product=fur leader peptide;pseudo=true;transl_table=11 DALFDA020000030.1 tpg gene 62508 62960 . + . ID=gene-O5C65_004032;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=O5C65_004032 DALFDA020000030.1 Protein Homology CDS 62508 62960 . + 0 ID=cds-HJH9174062.1;Parent=gene-O5C65_004032;Dbxref=NCBI_GP:HJH9174062.1;Name=HJH9174062.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459678.1;locus_tag=O5C65_004032;product=ferric iron uptake transcriptional regulator;protein_id=HJH9174062.1;transl_table=11 DALFDA020000030.1 tpg gene 63075 64001 . + . ID=gene-O5C65_004033;Name=tcuR;gbkey=Gene;gene=tcuR;gene_biotype=protein_coding;locus_tag=O5C65_004033 DALFDA020000030.1 Protein Homology CDS 63075 64001 . + 0 ID=cds-HJH9174063.1;Parent=gene-O5C65_004033;Dbxref=NCBI_GP:HJH9174063.1;Name=HJH9174063.1;gbkey=CDS;gene=tcuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459677.1;locus_tag=O5C65_004033;product=tricarballylate utilization LysR family transcriptional regulator TcuR;protein_id=HJH9174063.1;transl_table=11 DALFDA020000030.1 tpg gene 64099 65502 . + . ID=gene-O5C65_004034;Name=tcuA;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=O5C65_004034 DALFDA020000030.1 Protein Homology CDS 64099 65502 . + 0 ID=cds-HJH9174064.1;Parent=gene-O5C65_004034;Dbxref=NCBI_GP:HJH9174064.1;Name=HJH9174064.1;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459676.1;locus_tag=O5C65_004034;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=HJH9174064.1;transl_table=11 DALFDA020000030.1 tpg gene 65489 66628 . + . ID=gene-O5C65_004035;Name=tcuB;gbkey=Gene;gene=tcuB;gene_biotype=protein_coding;locus_tag=O5C65_004035 DALFDA020000030.1 Protein Homology CDS 65489 66628 . + 0 ID=cds-HJH9174065.1;Parent=gene-O5C65_004035;Dbxref=NCBI_GP:HJH9174065.1;Name=HJH9174065.1;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459675.1;locus_tag=O5C65_004035;product=tricarballylate utilization protein TcuB;protein_id=HJH9174065.1;transl_table=11 DALFDA020000030.1 tpg gene 66679 67983 . + . ID=gene-O5C65_004036;Name=tcuC;gbkey=Gene;gene=tcuC;gene_biotype=protein_coding;locus_tag=O5C65_004036 DALFDA020000030.1 Protein Homology CDS 66679 67983 . + 0 ID=cds-HJH9174066.1;Parent=gene-O5C65_004036;Dbxref=NCBI_GP:HJH9174066.1;Name=HJH9174066.1;gbkey=CDS;gene=tcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459674.1;locus_tag=O5C65_004036;product=tricarballylate/proton symporter TcuC;protein_id=HJH9174066.1;transl_table=11 DALFDA020000030.1 tpg gene 68032 68364 . - . ID=gene-O5C65_004037;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=O5C65_004037 DALFDA020000030.1 Protein Homology CDS 68032 68364 . - 0 ID=cds-HJH9174067.1;Parent=gene-O5C65_004037;Dbxref=NCBI_GP:HJH9174067.1;Name=HJH9174067.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459673.1;locus_tag=O5C65_004037;product=ChiQ/YbfN family lipoprotein;protein_id=HJH9174067.1;transl_table=11 DALFDA020000030.1 tpg gene 68414 69820 . - . ID=gene-O5C65_004038;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=O5C65_004038 DALFDA020000030.1 Protein Homology CDS 68414 69820 . - 0 ID=cds-HJH9174068.1;Parent=gene-O5C65_004038;Dbxref=NCBI_GP:HJH9174068.1;Name=HJH9174068.1;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459672.1;locus_tag=O5C65_004038;product=chitoporin ChiP;protein_id=HJH9174068.1;transl_table=11 ##sequence-region DALFDA020000031.1 1 66828 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000031.1 tpg region 1 66828 . + . ID=DALFDA020000031.1:1..66828;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000031.1 tpg gene 1 136 . + . ID=gene-O5C65_004039;Name=O5C65_004039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004039;partial=true;start_range=.,1 DALFDA020000031.1 Protein Homology CDS 1 136 . + 1 ID=cds-HJH9174069.1;Parent=gene-O5C65_004039;Dbxref=NCBI_GP:HJH9174069.1;Name=HJH9174069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460123.1;locus_tag=O5C65_004039;partial=true;product=YceK/YidQ family lipoprotein;protein_id=HJH9174069.1;start_range=.,1;transl_table=11 DALFDA020000031.1 tpg gene 137 511 . - . ID=gene-O5C65_004040;Name=O5C65_004040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004040 DALFDA020000031.1 Protein Homology CDS 137 511 . - 0 ID=cds-HJH9174070.1;Parent=gene-O5C65_004040;Dbxref=NCBI_GP:HJH9174070.1;Name=HJH9174070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460124.1;locus_tag=O5C65_004040;product=MysB family protein;protein_id=HJH9174070.1;transl_table=11 DALFDA020000031.1 tpg gene 593 1807 . - . ID=gene-O5C65_004041;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=O5C65_004041 DALFDA020000031.1 Protein Homology CDS 593 1807 . - 0 ID=cds-HJH9174071.1;Parent=gene-O5C65_004041;Dbxref=NCBI_GP:HJH9174071.1;Name=HJH9174071.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460125.1;locus_tag=O5C65_004041;product=multidrug efflux MFS transporter MdtG;protein_id=HJH9174071.1;transl_table=11 DALFDA020000031.1 tpg gene 1962 2882 . - . ID=gene-O5C65_004042;Name=O5C65_004042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004042 DALFDA020000031.1 Protein Homology CDS 1962 2882 . - 0 ID=cds-HJH9174072.1;Parent=gene-O5C65_004042;Dbxref=NCBI_GP:HJH9174072.1;Name=HJH9174072.1;Ontology_term=GO:0036104,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460126.1;locus_tag=O5C65_004042;product=Kdo(2)-lipid IV(A) acyltransferase;protein_id=HJH9174072.1;transl_table=11 DALFDA020000031.1 tpg gene 3102 4154 . + . ID=gene-O5C65_004043;Name=O5C65_004043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004043 DALFDA020000031.1 Protein Homology CDS 3102 4154 . + 0 ID=cds-HJH9174073.1;Parent=gene-O5C65_004043;Dbxref=NCBI_GP:HJH9174073.1;Name=HJH9174073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460127.1;locus_tag=O5C65_004043;product=rhodanese-related sulfurtransferase;protein_id=HJH9174073.1;transl_table=11 DALFDA020000031.1 tpg gene 4206 4781 . - . ID=gene-O5C65_004044;Name=O5C65_004044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004044 DALFDA020000031.1 Protein Homology CDS 4206 4781 . - 0 ID=cds-HJH9174074.1;Parent=gene-O5C65_004044;Dbxref=NCBI_GP:HJH9174074.1;Name=HJH9174074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460128.1;locus_tag=O5C65_004044;product=YceI family protein;protein_id=HJH9174074.1;transl_table=11 DALFDA020000031.1 tpg gene 4778 5350 . - . ID=gene-O5C65_004045;Name=O5C65_004045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004045 DALFDA020000031.1 Protein Homology CDS 4778 5350 . - 0 ID=cds-HJH9174075.1;Parent=gene-O5C65_004045;Dbxref=NCBI_GP:HJH9174075.1;Name=HJH9174075.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460129.1;locus_tag=O5C65_004045;product=cytochrome b;protein_id=HJH9174075.1;transl_table=11 DALFDA020000031.1 tpg gene 5613 5726 . - . ID=gene-O5C65_004046;Name=O5C65_004046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004046 DALFDA020000031.1 Protein Homology CDS 5613 5726 . - 0 ID=cds-HJH9174076.1;Parent=gene-O5C65_004046;Dbxref=NCBI_GP:HJH9174076.1;Name=HJH9174076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460130.1;locus_tag=O5C65_004046;product=YceO family protein;protein_id=HJH9174076.1;transl_table=11 DALFDA020000031.1 tpg gene 5767 6885 . - . ID=gene-O5C65_004047;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=O5C65_004047 DALFDA020000031.1 Protein Homology CDS 5767 6885 . - 0 ID=cds-HJH9174077.1;Parent=gene-O5C65_004047;Dbxref=NCBI_GP:HJH9174077.1;Name=HJH9174077.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460131.1;locus_tag=O5C65_004047;product=N-methyl-L-tryptophan oxidase;protein_id=HJH9174077.1;transl_table=11 DALFDA020000031.1 tpg gene 6998 7252 . - . ID=gene-O5C65_004048;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=O5C65_004048 DALFDA020000031.1 Protein Homology CDS 6998 7252 . - 0 ID=cds-HJH9174078.1;Parent=gene-O5C65_004048;Dbxref=NCBI_GP:HJH9174078.1;Name=HJH9174078.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460132.3;locus_tag=O5C65_004048;product=biofilm formation regulator BssS;protein_id=HJH9174078.1;transl_table=11 DALFDA020000031.1 tpg gene 7542 7787 . - . ID=gene-O5C65_004049;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=O5C65_004049 DALFDA020000031.1 Protein Homology CDS 7542 7787 . - 0 ID=cds-HJH9174079.1;Parent=gene-O5C65_004049;Dbxref=NCBI_GP:HJH9174079.1;Name=HJH9174079.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460133.1;locus_tag=O5C65_004049;product=DNA damage-inducible protein I;protein_id=HJH9174079.1;transl_table=11 DALFDA020000031.1 tpg gene 7861 8907 . - . ID=gene-O5C65_004050;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=O5C65_004050 DALFDA020000031.1 Protein Homology CDS 7861 8907 . - 0 ID=cds-HJH9174080.1;Parent=gene-O5C65_004050;Dbxref=NCBI_GP:HJH9174080.1;Name=HJH9174080.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460134.1;locus_tag=O5C65_004050;product=dihydroorotase;protein_id=HJH9174080.1;transl_table=11 DALFDA020000031.1 tpg gene 9011 9571 . - . ID=gene-O5C65_004051;Name=O5C65_004051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004051 DALFDA020000031.1 Protein Homology CDS 9011 9571 . - 0 ID=cds-HJH9174081.1;Parent=gene-O5C65_004051;Dbxref=NCBI_GP:HJH9174081.1;Name=HJH9174081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460135.1;locus_tag=O5C65_004051;product=lipoprotein;protein_id=HJH9174081.1;transl_table=11 DALFDA020000031.1 tpg gene 9696 10343 . - . ID=gene-O5C65_004052;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=O5C65_004052 DALFDA020000031.1 Protein Homology CDS 9696 10343 . - 0 ID=cds-HJH9174082.1;Parent=gene-O5C65_004052;Dbxref=NCBI_GP:HJH9174082.1;Name=HJH9174082.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460136.1;locus_tag=O5C65_004052;product=glutaredoxin 2;protein_id=HJH9174082.1;transl_table=11 DALFDA020000031.1 tpg gene 10407 11615 . - . ID=gene-O5C65_004053;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=O5C65_004053 DALFDA020000031.1 Protein Homology CDS 10407 11615 . - 0 ID=cds-HJH9174083.1;Parent=gene-O5C65_004053;Dbxref=NCBI_GP:HJH9174083.1;Name=HJH9174083.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460137.1;locus_tag=O5C65_004053;product=multidrug efflux MFS transporter MdtH;protein_id=HJH9174083.1;transl_table=11 DALFDA020000031.1 tpg gene 11852 12436 . + . ID=gene-O5C65_004054;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=O5C65_004054 DALFDA020000031.1 Protein Homology CDS 11852 12436 . + 0 ID=cds-HJH9174084.1;Parent=gene-O5C65_004054;Dbxref=NCBI_GP:HJH9174084.1;Name=HJH9174084.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460138.1;locus_tag=O5C65_004054;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=HJH9174084.1;transl_table=11 DALFDA020000031.1 tpg gene 12472 13119 . + . ID=gene-O5C65_004055;Name=O5C65_004055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004055 DALFDA020000031.1 Protein Homology CDS 12472 13119 . + 0 ID=cds-HJH9174085.1;Parent=gene-O5C65_004055;Dbxref=NCBI_GP:HJH9174085.1;Name=HJH9174085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460139.1;locus_tag=O5C65_004055;product=YceH family protein;protein_id=HJH9174085.1;transl_table=11 DALFDA020000031.1 tpg gene 13121 14044 . + . ID=gene-O5C65_004056;Name=O5C65_004056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004056 DALFDA020000031.1 Protein Homology CDS 13121 14044 . + 0 ID=cds-HJH9174086.1;Parent=gene-O5C65_004056;Dbxref=NCBI_GP:HJH9174086.1;Name=HJH9174086.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460140.1;locus_tag=O5C65_004056;product=Gfo/Idh/MocA family protein;protein_id=HJH9174086.1;transl_table=11 DALFDA020000031.1 tpg gene 14348 15883 . + . ID=gene-O5C65_004057;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=O5C65_004057 DALFDA020000031.1 Protein Homology CDS 14348 15883 . + 0 ID=cds-HJH9174087.1;Parent=gene-O5C65_004057;Dbxref=NCBI_GP:HJH9174087.1;Name=HJH9174087.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226258.1;locus_tag=O5C65_004057;product=murein biosynthesis integral membrane protein MurJ;protein_id=HJH9174087.1;transl_table=11 DALFDA020000031.1 tpg gene 15965 16387 . - . ID=gene-O5C65_004058;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=O5C65_004058 DALFDA020000031.1 Protein Homology CDS 15965 16387 . - 0 ID=cds-HJH9174088.1;Parent=gene-O5C65_004058;Dbxref=NCBI_GP:HJH9174088.1;Name=HJH9174088.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460142.1;locus_tag=O5C65_004058;product=flagella biosynthesis chaperone FlgN;protein_id=HJH9174088.1;transl_table=11 DALFDA020000031.1 tpg gene 16392 16685 . - . ID=gene-O5C65_004059;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=O5C65_004059 DALFDA020000031.1 Protein Homology CDS 16392 16685 . - 0 ID=cds-HJH9174089.1;Parent=gene-O5C65_004059;Dbxref=NCBI_GP:HJH9174089.1;Name=HJH9174089.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460143.1;locus_tag=O5C65_004059;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=HJH9174089.1;transl_table=11 DALFDA020000031.1 tpg gene 16777 17436 . - . ID=gene-O5C65_004060;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=O5C65_004060 DALFDA020000031.1 Protein Homology CDS 16777 17436 . - 0 ID=cds-HJH9174090.1;Parent=gene-O5C65_004060;Dbxref=NCBI_GP:HJH9174090.1;Name=HJH9174090.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460144.1;locus_tag=O5C65_004060;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=HJH9174090.1;transl_table=11 DALFDA020000031.1 tpg gene 17593 18009 . + . ID=gene-O5C65_004061;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=O5C65_004061 DALFDA020000031.1 Protein Homology CDS 17593 18009 . + 0 ID=cds-HJH9174091.1;Parent=gene-O5C65_004061;Dbxref=NCBI_GP:HJH9174091.1;Name=HJH9174091.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460145.1;locus_tag=O5C65_004061;product=flagellar basal body rod protein FlgB;protein_id=HJH9174091.1;transl_table=11 DALFDA020000031.1 tpg gene 18013 18417 . + . ID=gene-O5C65_004062;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=O5C65_004062 DALFDA020000031.1 Protein Homology CDS 18013 18417 . + 0 ID=cds-HJH9174092.1;Parent=gene-O5C65_004062;Dbxref=NCBI_GP:HJH9174092.1;Name=HJH9174092.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=O5C65_004062;product=flagellar basal body rod protein FlgC;protein_id=HJH9174092.1;transl_table=11 DALFDA020000031.1 tpg gene 18429 19127 . + . ID=gene-O5C65_004063;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=O5C65_004063 DALFDA020000031.1 Protein Homology CDS 18429 19127 . + 0 ID=cds-HJH9174093.1;Parent=gene-O5C65_004063;Dbxref=NCBI_GP:HJH9174093.1;Name=HJH9174093.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460147.1;locus_tag=O5C65_004063;product=flagellar hook assembly protein FlgD;protein_id=HJH9174093.1;transl_table=11 DALFDA020000031.1 tpg gene 19154 20365 . + . ID=gene-O5C65_004064;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=O5C65_004064 DALFDA020000031.1 Protein Homology CDS 19154 20365 . + 0 ID=cds-HJH9174094.1;Parent=gene-O5C65_004064;Dbxref=NCBI_GP:HJH9174094.1;Name=HJH9174094.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460148.1;locus_tag=O5C65_004064;product=flagellar hook protein FlgE;protein_id=HJH9174094.1;transl_table=11 DALFDA020000031.1 tpg gene 20386 21141 . + . ID=gene-O5C65_004065;Name=O5C65_004065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004065 DALFDA020000031.1 Protein Homology CDS 20386 21141 . + 0 ID=cds-HJH9174095.1;Parent=gene-O5C65_004065;Dbxref=NCBI_GP:HJH9174095.1;Name=HJH9174095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460149.1;locus_tag=O5C65_004065;product=flagellar basal body rod protein FlgF;protein_id=HJH9174095.1;transl_table=11 DALFDA020000031.1 tpg gene 21155 21937 . + . ID=gene-O5C65_004066;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=O5C65_004066 DALFDA020000031.1 Protein Homology CDS 21155 21937 . + 0 ID=cds-HJH9174096.1;Parent=gene-O5C65_004066;Dbxref=NCBI_GP:HJH9174096.1;Name=HJH9174096.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=O5C65_004066;product=flagellar basal-body rod protein FlgG;protein_id=HJH9174096.1;transl_table=11 DALFDA020000031.1 tpg gene 21992 22690 . + . ID=gene-O5C65_004067;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=O5C65_004067 DALFDA020000031.1 Protein Homology CDS 21992 22690 . + 0 ID=cds-HJH9174097.1;Parent=gene-O5C65_004067;Dbxref=NCBI_GP:HJH9174097.1;Name=HJH9174097.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460151.1;locus_tag=O5C65_004067;product=flagellar basal body L-ring protein FlgH;protein_id=HJH9174097.1;transl_table=11 DALFDA020000031.1 tpg gene 22702 23799 . + . ID=gene-O5C65_004068;Name=O5C65_004068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004068 DALFDA020000031.1 Protein Homology CDS 22702 23799 . + 0 ID=cds-HJH9174098.1;Parent=gene-O5C65_004068;Dbxref=NCBI_GP:HJH9174098.1;Name=HJH9174098.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460152.1;locus_tag=O5C65_004068;product=flagellar basal body P-ring protein FlgI;protein_id=HJH9174098.1;transl_table=11 DALFDA020000031.1 tpg gene 23799 24749 . + . ID=gene-O5C65_004069;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=O5C65_004069 DALFDA020000031.1 Protein Homology CDS 23799 24749 . + 0 ID=cds-HJH9174099.1;Parent=gene-O5C65_004069;Dbxref=NCBI_GP:HJH9174099.1;Name=HJH9174099.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460153.1;locus_tag=O5C65_004069;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=HJH9174099.1;transl_table=11 DALFDA020000031.1 tpg gene 24814 26475 . + . ID=gene-O5C65_004070;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=O5C65_004070 DALFDA020000031.1 Protein Homology CDS 24814 26475 . + 0 ID=cds-HJH9174100.1;Parent=gene-O5C65_004070;Dbxref=NCBI_GP:HJH9174100.1;Name=HJH9174100.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460154.1;locus_tag=O5C65_004070;product=flagellar hook-associated protein FlgK;protein_id=HJH9174100.1;transl_table=11 DALFDA020000031.1 tpg gene 26490 27443 . + . ID=gene-O5C65_004071;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=O5C65_004071 DALFDA020000031.1 Protein Homology CDS 26490 27443 . + 0 ID=cds-HJH9174101.1;Parent=gene-O5C65_004071;Dbxref=NCBI_GP:HJH9174101.1;Name=HJH9174101.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460155.1;locus_tag=O5C65_004071;product=flagellar hook-associated protein FlgL;protein_id=HJH9174101.1;transl_table=11 DALFDA020000031.1 tpg gene 27696 30899 . - . ID=gene-O5C65_004072;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=O5C65_004072 DALFDA020000031.1 Protein Homology CDS 27696 30899 . - 0 ID=cds-HJH9174102.1;Parent=gene-O5C65_004072;Dbxref=NCBI_GP:HJH9174102.1;Name=HJH9174102.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460156.1;locus_tag=O5C65_004072;product=ribonuclease E;protein_id=HJH9174102.1;transl_table=11 DALFDA020000031.1 tpg gene 31473 32432 . + . ID=gene-O5C65_004073;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=O5C65_004073 DALFDA020000031.1 Protein Homology CDS 31473 32432 . + 0 ID=cds-HJH9174103.1;Parent=gene-O5C65_004073;Dbxref=NCBI_GP:HJH9174103.1;Name=HJH9174103.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460157.1;locus_tag=O5C65_004073;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=HJH9174103.1;transl_table=11 DALFDA020000031.1 tpg gene 32588 33331 . + . ID=gene-O5C65_004074;Name=O5C65_004074;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004074 DALFDA020000031.1 Protein Homology CDS 32588 33331 . + 0 ID=cds-HJH9174104.1;Parent=gene-O5C65_004074;Dbxref=NCBI_GP:HJH9174104.1;Name=HJH9174104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460158.1;locus_tag=O5C65_004074;product=DUF3053 domain-containing protein;protein_id=HJH9174104.1;transl_table=11 DALFDA020000031.1 tpg gene 33534 33758 . + . ID=gene-O5C65_004075;Name=O5C65_004075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004075 DALFDA020000031.1 GeneMarkS-2+ CDS 33534 33758 . + 0 ID=cds-HJH9174105.1;Parent=gene-O5C65_004075;Dbxref=NCBI_GP:HJH9174105.1;Name=HJH9174105.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004075;product=hypothetical protein;protein_id=HJH9174105.1;transl_table=11 DALFDA020000031.1 tpg gene 33830 34414 . - . ID=gene-O5C65_004076;Name=O5C65_004076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004076 DALFDA020000031.1 Protein Homology CDS 33830 34414 . - 0 ID=cds-HJH9174106.1;Parent=gene-O5C65_004076;Dbxref=NCBI_GP:HJH9174106.1;Name=HJH9174106.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460159.1;locus_tag=O5C65_004076;product=Maf family protein;protein_id=HJH9174106.1;transl_table=11 DALFDA020000031.1 tpg gene 34612 35133 . + . ID=gene-O5C65_004077;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=O5C65_004077 DALFDA020000031.1 Protein Homology CDS 34612 35133 . + 0 ID=cds-HJH9174107.1;Parent=gene-O5C65_004077;Dbxref=NCBI_GP:HJH9174107.1;Name=HJH9174107.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=O5C65_004077;product=23S rRNA accumulation protein YceD;protein_id=HJH9174107.1;transl_table=11 DALFDA020000031.1 tpg gene 35185 35358 . + . ID=gene-O5C65_004078;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=O5C65_004078 DALFDA020000031.1 Protein Homology CDS 35185 35358 . + 0 ID=cds-HJH9174108.1;Parent=gene-O5C65_004078;Dbxref=NCBI_GP:HJH9174108.1;Name=HJH9174108.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=O5C65_004078;product=50S ribosomal protein L32;protein_id=HJH9174108.1;transl_table=11 DALFDA020000031.1 tpg gene 35492 36571 . + . ID=gene-O5C65_004079;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=O5C65_004079 DALFDA020000031.1 Protein Homology CDS 35492 36571 . + 0 ID=cds-HJH9174109.1;Parent=gene-O5C65_004079;Dbxref=NCBI_GP:HJH9174109.1;Name=HJH9174109.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460162.1;locus_tag=O5C65_004079;product=phosphate acyltransferase PlsX;protein_id=HJH9174109.1;transl_table=11 DALFDA020000031.1 tpg gene 36651 37604 . + . ID=gene-O5C65_004080;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=O5C65_004080 DALFDA020000031.1 Protein Homology CDS 36651 37604 . + 0 ID=cds-HJH9174110.1;Parent=gene-O5C65_004080;Dbxref=NCBI_GP:HJH9174110.1;Name=HJH9174110.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=O5C65_004080;product=beta-ketoacyl-ACP synthase III;protein_id=HJH9174110.1;transl_table=11 DALFDA020000031.1 tpg gene 37620 38549 . + . ID=gene-O5C65_004081;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=O5C65_004081 DALFDA020000031.1 Protein Homology CDS 37620 38549 . + 0 ID=cds-HJH9174111.1;Parent=gene-O5C65_004081;Dbxref=NCBI_GP:HJH9174111.1;Name=HJH9174111.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460164.1;locus_tag=O5C65_004081;product=ACP S-malonyltransferase;protein_id=HJH9174111.1;transl_table=11 DALFDA020000031.1 tpg gene 38562 39296 . + . ID=gene-O5C65_004082;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=O5C65_004082 DALFDA020000031.1 Protein Homology CDS 38562 39296 . + 0 ID=cds-HJH9174112.1;Parent=gene-O5C65_004082;Dbxref=NCBI_GP:HJH9174112.1;Name=HJH9174112.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=O5C65_004082;product=3-oxoacyl-ACP reductase FabG;protein_id=HJH9174112.1;transl_table=11 DALFDA020000031.1 tpg gene 39452 39688 . + . ID=gene-O5C65_004083;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=O5C65_004083 DALFDA020000031.1 Protein Homology CDS 39452 39688 . + 0 ID=cds-HJH9174113.1;Parent=gene-O5C65_004083;Dbxref=NCBI_GP:HJH9174113.1;Name=HJH9174113.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=O5C65_004083;product=acyl carrier protein;protein_id=HJH9174113.1;transl_table=11 DALFDA020000031.1 tpg gene 39774 41015 . + . ID=gene-O5C65_004084;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=O5C65_004084 DALFDA020000031.1 Protein Homology CDS 39774 41015 . + 0 ID=cds-HJH9174114.1;Parent=gene-O5C65_004084;Dbxref=NCBI_GP:HJH9174114.1;Name=HJH9174114.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460167.1;locus_tag=O5C65_004084;product=beta-ketoacyl-ACP synthase II;protein_id=HJH9174114.1;transl_table=11 DALFDA020000031.1 tpg gene 41139 41948 . + . ID=gene-O5C65_004085;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=O5C65_004085 DALFDA020000031.1 Protein Homology CDS 41139 41948 . + 0 ID=cds-HJH9174115.1;Parent=gene-O5C65_004085;Dbxref=NCBI_GP:HJH9174115.1;Name=HJH9174115.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460168.1;locus_tag=O5C65_004085;product=aminodeoxychorismate lyase;protein_id=HJH9174115.1;transl_table=11 DALFDA020000031.1 tpg gene 41951 42973 . + . ID=gene-O5C65_004086;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=O5C65_004086 DALFDA020000031.1 Protein Homology CDS 41951 42973 . + 0 ID=cds-HJH9174116.1;Parent=gene-O5C65_004086;Dbxref=NCBI_GP:HJH9174116.1;Name=HJH9174116.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460169.1;locus_tag=O5C65_004086;product=cell division protein YceG;protein_id=HJH9174116.1;transl_table=11 DALFDA020000031.1 tpg gene 42963 43604 . + . ID=gene-O5C65_004087;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=O5C65_004087 DALFDA020000031.1 Protein Homology CDS 42963 43604 . + 0 ID=cds-HJH9174117.1;Parent=gene-O5C65_004087;Dbxref=NCBI_GP:HJH9174117.1;Name=HJH9174117.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460170.1;locus_tag=O5C65_004087;product=dTMP kinase;protein_id=HJH9174117.1;transl_table=11 DALFDA020000031.1 tpg gene 43601 44605 . + . ID=gene-O5C65_004088;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=O5C65_004088 DALFDA020000031.1 Protein Homology CDS 43601 44605 . + 0 ID=cds-HJH9174118.1;Parent=gene-O5C65_004088;Dbxref=NCBI_GP:HJH9174118.1;Name=HJH9174118.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460171.1;locus_tag=O5C65_004088;product=DNA polymerase III subunit delta';protein_id=HJH9174118.1;transl_table=11 DALFDA020000031.1 tpg gene 44616 45413 . + . ID=gene-O5C65_004089;Name=O5C65_004089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004089 DALFDA020000031.1 Protein Homology CDS 44616 45413 . + 0 ID=cds-HJH9174119.1;Parent=gene-O5C65_004089;Dbxref=NCBI_GP:HJH9174119.1;Name=HJH9174119.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460172.1;locus_tag=O5C65_004089;product=metal-dependent hydrolase;protein_id=HJH9174119.1;transl_table=11 DALFDA020000031.1 tpg gene 45708 47141 . + . ID=gene-O5C65_004090;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=O5C65_004090 DALFDA020000031.1 Protein Homology CDS 45708 47141 . + 0 ID=cds-HJH9174120.1;Parent=gene-O5C65_004090;Dbxref=NCBI_GP:HJH9174120.1;Name=HJH9174120.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460173.1;locus_tag=O5C65_004090;product=PTS glucose transporter subunit IIBC;protein_id=HJH9174120.1;transl_table=11 DALFDA020000031.1 tpg gene 47226 49400 . - . ID=gene-O5C65_004091;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=O5C65_004091 DALFDA020000031.1 Protein Homology CDS 47226 49400 . - 0 ID=cds-HJH9174121.1;Parent=gene-O5C65_004091;Dbxref=NCBI_GP:HJH9174121.1;Name=HJH9174121.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460174.1;locus_tag=O5C65_004091;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=HJH9174121.1;transl_table=11 DALFDA020000031.1 tpg gene 49742 50101 . + . ID=gene-O5C65_004092;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=O5C65_004092 DALFDA020000031.1 Protein Homology CDS 49742 50101 . + 0 ID=cds-HJH9174122.1;Parent=gene-O5C65_004092;Dbxref=NCBI_GP:HJH9174122.1;Name=HJH9174122.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460175.1;locus_tag=O5C65_004092;product=purine nucleoside phosphoramidase;protein_id=HJH9174122.1;transl_table=11 DALFDA020000031.1 tpg gene 50104 50478 . + . ID=gene-O5C65_004093;Name=O5C65_004093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004093 DALFDA020000031.1 Protein Homology CDS 50104 50478 . + 0 ID=cds-HJH9174123.1;Parent=gene-O5C65_004093;Dbxref=NCBI_GP:HJH9174123.1;Name=HJH9174123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460176.1;locus_tag=O5C65_004093;product=YcfL family protein;protein_id=HJH9174123.1;transl_table=11 DALFDA020000031.1 tpg gene 50492 51130 . + . ID=gene-O5C65_004094;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=O5C65_004094 DALFDA020000031.1 Protein Homology CDS 50492 51130 . + 0 ID=cds-HJH9174124.1;Parent=gene-O5C65_004094;Dbxref=NCBI_GP:HJH9174124.1;Name=HJH9174124.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460177.1;locus_tag=O5C65_004094;product=penicillin-binding protein activator LpoB;protein_id=HJH9174124.1;transl_table=11 DALFDA020000031.1 tpg gene 51111 51935 . + . ID=gene-O5C65_004095;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=O5C65_004095 DALFDA020000031.1 Protein Homology CDS 51111 51935 . + 0 ID=cds-HJH9174125.1;Parent=gene-O5C65_004095;Dbxref=NCBI_GP:HJH9174125.1;Name=HJH9174125.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460178.1;locus_tag=O5C65_004095;product=thiamine kinase;protein_id=HJH9174125.1;transl_table=11 DALFDA020000031.1 tpg gene 51946 52971 . + . ID=gene-O5C65_004096;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=O5C65_004096 DALFDA020000031.1 Protein Homology CDS 51946 52971 . + 0 ID=cds-HJH9174126.1;Parent=gene-O5C65_004096;Dbxref=NCBI_GP:HJH9174126.1;Name=HJH9174126.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460179.1;locus_tag=O5C65_004096;product=beta-N-acetylhexosaminidase;protein_id=HJH9174126.1;transl_table=11 DALFDA020000031.1 tpg gene 52996 53538 . + . ID=gene-O5C65_004097;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=O5C65_004097 DALFDA020000031.1 Protein Homology CDS 52996 53538 . + 0 ID=cds-HJH9174127.1;Parent=gene-O5C65_004097;Dbxref=NCBI_GP:HJH9174127.1;Name=HJH9174127.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=O5C65_004097;product=alpha/beta hydrolase YcfP;protein_id=HJH9174127.1;transl_table=11 DALFDA020000031.1 tpg gene 53793 55097 . + . ID=gene-O5C65_004098;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=O5C65_004098 DALFDA020000031.1 Protein Homology CDS 53793 55097 . + 0 ID=cds-HJH9174128.1;Parent=gene-O5C65_004098;Dbxref=NCBI_GP:HJH9174128.1;Name=HJH9174128.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=O5C65_004098;product=NADH-quinone dehydrogenase;protein_id=HJH9174128.1;transl_table=11 DALFDA020000031.1 tpg gene 55278 55817 . + . ID=gene-O5C65_004099;Name=O5C65_004099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004099 DALFDA020000031.1 Protein Homology CDS 55278 55817 . + 0 ID=cds-HJH9174129.1;Parent=gene-O5C65_004099;Dbxref=NCBI_GP:HJH9174129.1;Name=HJH9174129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460182.1;locus_tag=O5C65_004099;product=glycine zipper 2TM domain-containing protein;protein_id=HJH9174129.1;transl_table=11 DALFDA020000031.1 tpg gene 55892 56527 . - . ID=gene-O5C65_004100;Name=O5C65_004100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004100 DALFDA020000031.1 Protein Homology CDS 55892 56527 . - 0 ID=cds-HJH9174130.1;Parent=gene-O5C65_004100;Dbxref=NCBI_GP:HJH9174130.1;Name=HJH9174130.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460183.1;locus_tag=O5C65_004100;product=TetR/AcrR family transcriptional regulator;protein_id=HJH9174130.1;transl_table=11 DALFDA020000031.1 tpg gene 56769 57026 . + . ID=gene-O5C65_004101;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=O5C65_004101 DALFDA020000031.1 Protein Homology CDS 56769 57026 . + 0 ID=cds-HJH9174131.1;Parent=gene-O5C65_004101;Dbxref=NCBI_GP:HJH9174131.1;Name=HJH9174131.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460184.1;locus_tag=O5C65_004101;product=multiple stress resistance protein BhsA;protein_id=HJH9174131.1;transl_table=11 DALFDA020000031.1 tpg gene 57123 58088 . - . ID=gene-O5C65_004102;Name=O5C65_004102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004102 DALFDA020000031.1 Protein Homology CDS 57123 58088 . - 0 ID=cds-HJH9174132.1;Parent=gene-O5C65_004102;Dbxref=NCBI_GP:HJH9174132.1;Name=HJH9174132.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460185.1;locus_tag=O5C65_004102;product=L%2CD-transpeptidase family protein;protein_id=HJH9174132.1;transl_table=11 DALFDA020000031.1 tpg gene 58236 61682 . - . ID=gene-O5C65_004103;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=O5C65_004103 DALFDA020000031.1 Protein Homology CDS 58236 61682 . - 0 ID=cds-HJH9174133.1;Parent=gene-O5C65_004103;Dbxref=NCBI_GP:HJH9174133.1;Name=HJH9174133.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460186.1;locus_tag=O5C65_004103;product=transcription-repair coupling factor;protein_id=HJH9174133.1;transl_table=11 DALFDA020000031.1 tpg gene 62020 63219 . + . ID=gene-O5C65_004104;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=O5C65_004104 DALFDA020000031.1 Protein Homology CDS 62020 63219 . + 0 ID=cds-HJH9174134.1;Parent=gene-O5C65_004104;Dbxref=NCBI_GP:HJH9174134.1;Name=HJH9174134.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=O5C65_004104;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=HJH9174134.1;transl_table=11 DALFDA020000031.1 tpg gene 63212 63913 . + . ID=gene-O5C65_004105;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=O5C65_004105 DALFDA020000031.1 Protein Homology CDS 63212 63913 . + 0 ID=cds-HJH9174135.1;Parent=gene-O5C65_004105;Dbxref=NCBI_GP:HJH9174135.1;Name=HJH9174135.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460188.1;locus_tag=O5C65_004105;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=HJH9174135.1;transl_table=11 DALFDA020000031.1 tpg gene 63913 65157 . + . ID=gene-O5C65_004106;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=O5C65_004106 DALFDA020000031.1 Protein Homology CDS 63913 65157 . + 0 ID=cds-HJH9174136.1;Parent=gene-O5C65_004106;Dbxref=NCBI_GP:HJH9174136.1;Name=HJH9174136.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460189.1;locus_tag=O5C65_004106;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=HJH9174136.1;transl_table=11 DALFDA020000031.1 tpg gene 65186 66097 . + . ID=gene-O5C65_004107;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=O5C65_004107 DALFDA020000031.1 Protein Homology CDS 65186 66097 . + 0 ID=cds-HJH9174137.1;Parent=gene-O5C65_004107;Dbxref=NCBI_GP:HJH9174137.1;Name=HJH9174137.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460190.1;locus_tag=O5C65_004107;product=N-acetylglucosamine kinase;protein_id=HJH9174137.1;transl_table=11 DALFDA020000031.1 tpg gene 66116 66828 . + . ID=gene-O5C65_004108;Name=cobB;end_range=66828,.;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=O5C65_004108;partial=true DALFDA020000031.1 Protein Homology CDS 66116 66828 . + 0 ID=cds-HJH9174138.1;Parent=gene-O5C65_004108;Dbxref=NCBI_GP:HJH9174138.1;Name=HJH9174138.1;Ontology_term=GO:0070403;end_range=66828,.;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=O5C65_004108;partial=true;product=Sir2 family NAD+-dependent deacetylase;protein_id=HJH9174138.1;transl_table=11 ##sequence-region DALFDA020000032.1 1 56610 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000032.1 tpg region 1 56610 . + . ID=DALFDA020000032.1:1..56610;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000032.1 tpg gene 130 483 . - . ID=gene-O5C65_004109;Name=O5C65_004109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004109 DALFDA020000032.1 Protein Homology CDS 130 483 . - 0 ID=cds-HJH9174139.1;Parent=gene-O5C65_004109;Dbxref=NCBI_GP:HJH9174139.1;Name=HJH9174139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246999.1;locus_tag=O5C65_004109;product=hypothetical protein;protein_id=HJH9174139.1;transl_table=11 DALFDA020000032.1 tpg gene 476 652 . - . ID=gene-O5C65_004110;Name=O5C65_004110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004110 DALFDA020000032.1 Protein Homology CDS 476 652 . - 0 ID=cds-HJH9174140.1;Parent=gene-O5C65_004110;Dbxref=NCBI_GP:HJH9174140.1;Name=HJH9174140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120337.1;locus_tag=O5C65_004110;product=host cell division inhibitor Icd-like protein;protein_id=HJH9174140.1;transl_table=11 DALFDA020000032.1 tpg gene 843 1028 . + . ID=gene-O5C65_004111;Name=O5C65_004111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004111 DALFDA020000032.1 Protein Homology CDS 843 1028 . + 0 ID=cds-HJH9174141.1;Parent=gene-O5C65_004111;Dbxref=NCBI_GP:HJH9174141.1;Name=HJH9174141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000190568.1;locus_tag=O5C65_004111;product=YlcI/YnfO family protein;protein_id=HJH9174141.1;transl_table=11 DALFDA020000032.1 tpg gene 1125 1355 . - . ID=gene-O5C65_004112;Name=O5C65_004112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004112 DALFDA020000032.1 Protein Homology CDS 1125 1355 . - 0 ID=cds-HJH9174142.1;Parent=gene-O5C65_004112;Dbxref=NCBI_GP:HJH9174142.1;Name=HJH9174142.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534484.1;locus_tag=O5C65_004112;product=helix-turn-helix transcriptional regulator;protein_id=HJH9174142.1;transl_table=11 DALFDA020000032.1 tpg gene 1745 2383 . - . ID=gene-O5C65_004113;Name=O5C65_004113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004113 DALFDA020000032.1 Protein Homology CDS 1745 2383 . - 0 ID=cds-HJH9174143.1;Parent=gene-O5C65_004113;Dbxref=NCBI_GP:HJH9174143.1;Name=HJH9174143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001066529.1;locus_tag=O5C65_004113;product=hypothetical protein;protein_id=HJH9174143.1;transl_table=11 DALFDA020000032.1 tpg gene 2414 3676 . - . ID=gene-O5C65_004114;Name=O5C65_004114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004114 DALFDA020000032.1 Protein Homology CDS 2414 3676 . - 0 ID=cds-HJH9174144.1;Parent=gene-O5C65_004114;Dbxref=NCBI_GP:HJH9174144.1;Name=HJH9174144.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000772652.1;locus_tag=O5C65_004114;product=tyrosine-type recombinase/integrase;protein_id=HJH9174144.1;transl_table=11 DALFDA020000032.1 tpg gene 3979 4863 . + . ID=gene-O5C65_004115;Name=O5C65_004115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004115 DALFDA020000032.1 Protein Homology CDS 3979 4863 . + 0 ID=cds-HJH9174145.1;Parent=gene-O5C65_004115;Dbxref=NCBI_GP:HJH9174145.1;Name=HJH9174145.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003830123.1;locus_tag=O5C65_004115;product=ParA family protein;protein_id=HJH9174145.1;transl_table=11 DALFDA020000032.1 tpg gene 4860 5234 . + . ID=gene-O5C65_004116;Name=O5C65_004116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004116 DALFDA020000032.1 Protein Homology CDS 4860 5234 . + 0 ID=cds-HJH9174146.1;Parent=gene-O5C65_004116;Dbxref=NCBI_GP:HJH9174146.1;Name=HJH9174146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686497.1;locus_tag=O5C65_004116;product=hypothetical protein;protein_id=HJH9174146.1;transl_table=11 DALFDA020000032.1 tpg gene 5227 6582 . + . ID=gene-O5C65_004117;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=O5C65_004117 DALFDA020000032.1 Protein Homology CDS 5227 6582 . + 0 ID=cds-HJH9174147.1;Parent=gene-O5C65_004117;Dbxref=NCBI_GP:HJH9174147.1;Name=HJH9174147.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=dnaB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012907444.1;locus_tag=O5C65_004117;product=replicative DNA helicase;protein_id=HJH9174147.1;transl_table=11 DALFDA020000032.1 tpg gene 6579 8063 . + . ID=gene-O5C65_004118;Name=O5C65_004118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004118 DALFDA020000032.1 Protein Homology CDS 6579 8063 . + 0 ID=cds-HJH9174148.1;Parent=gene-O5C65_004118;Dbxref=NCBI_GP:HJH9174148.1;Name=HJH9174148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001060565.1;locus_tag=O5C65_004118;product=ParB family protein;protein_id=HJH9174148.1;transl_table=11 DALFDA020000032.1 tpg gene 8047 8586 . + . ID=gene-O5C65_004119;Name=O5C65_004119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004119 DALFDA020000032.1 Protein Homology CDS 8047 8586 . + 0 ID=cds-HJH9174149.1;Parent=gene-O5C65_004119;Dbxref=NCBI_GP:HJH9174149.1;Name=HJH9174149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003863023.1;locus_tag=O5C65_004119;product=DUF2857 domain-containing protein;protein_id=HJH9174149.1;transl_table=11 DALFDA020000032.1 tpg gene 8605 9738 . + . ID=gene-O5C65_004120;Name=O5C65_004120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004120 DALFDA020000032.1 Protein Homology CDS 8605 9738 . + 0 ID=cds-HJH9174150.1;Parent=gene-O5C65_004120;Dbxref=NCBI_GP:HJH9174150.1;Name=HJH9174150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015368501.1;locus_tag=O5C65_004120;product=STY4528 family pathogenicity island replication protein;protein_id=HJH9174150.1;transl_table=11 DALFDA020000032.1 tpg gene 9869 10549 . + . ID=gene-O5C65_004121;Name=O5C65_004121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004121 DALFDA020000032.1 Protein Homology CDS 9869 10549 . + 0 ID=cds-HJH9174151.1;Parent=gene-O5C65_004121;Dbxref=NCBI_GP:HJH9174151.1;Name=HJH9174151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210596.1;locus_tag=O5C65_004121;product=hypothetical protein;protein_id=HJH9174151.1;transl_table=11 DALFDA020000032.1 tpg gene 10539 10808 . + . ID=gene-O5C65_004122;Name=O5C65_004122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004122 DALFDA020000032.1 Protein Homology CDS 10539 10808 . + 0 ID=cds-HJH9174152.1;Parent=gene-O5C65_004122;Dbxref=NCBI_GP:HJH9174152.1;Name=HJH9174152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210597.1;locus_tag=O5C65_004122;product=hypothetical protein;protein_id=HJH9174152.1;transl_table=11 DALFDA020000032.1 tpg gene 10874 11029 . - . ID=gene-O5C65_004123;Name=O5C65_004123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004123 DALFDA020000032.1 GeneMarkS-2+ CDS 10874 11029 . - 0 ID=cds-HJH9174153.1;Parent=gene-O5C65_004123;Dbxref=NCBI_GP:HJH9174153.1;Name=HJH9174153.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004123;product=hypothetical protein;protein_id=HJH9174153.1;transl_table=11 DALFDA020000032.1 tpg gene 11180 12457 . - . ID=gene-O5C65_004124;Name=O5C65_004124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004124 DALFDA020000032.1 Protein Homology CDS 11180 12457 . - 0 ID=cds-HJH9174154.1;Parent=gene-O5C65_004124;Dbxref=NCBI_GP:HJH9174154.1;Name=HJH9174154.1;Ontology_term=GO:0016310,GO:0004674,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003863019.1;locus_tag=O5C65_004124;product=type II toxin-antitoxin system HipA family toxin;protein_id=HJH9174154.1;transl_table=11 DALFDA020000032.1 tpg gene 12447 12785 . - . ID=gene-O5C65_004125;Name=O5C65_004125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004125 DALFDA020000032.1 Protein Homology CDS 12447 12785 . - 0 ID=cds-HJH9174155.1;Parent=gene-O5C65_004125;Dbxref=NCBI_GP:HJH9174155.1;Name=HJH9174155.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003863017.1;locus_tag=O5C65_004125;product=helix-turn-helix domain-containing protein;protein_id=HJH9174155.1;transl_table=11 DALFDA020000032.1 tpg gene 13226 13522 . - . ID=gene-O5C65_004126;Name=O5C65_004126;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004126 DALFDA020000032.1 Protein Homology CDS 13226 13522 . - 0 ID=cds-HJH9174156.1;Parent=gene-O5C65_004126;Dbxref=NCBI_GP:HJH9174156.1;Name=HJH9174156.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001097216.1;locus_tag=O5C65_004126;product=helix-turn-helix transcriptional regulator;protein_id=HJH9174156.1;transl_table=11 DALFDA020000032.1 tpg gene 13943 16255 . + . ID=gene-O5C65_004127;Name=O5C65_004127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004127 DALFDA020000032.1 Protein Homology CDS 13943 16255 . + 0 ID=cds-HJH9174157.1;Parent=gene-O5C65_004127;Dbxref=NCBI_GP:HJH9174157.1;Name=HJH9174157.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015368502.1;locus_tag=O5C65_004127;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=HJH9174157.1;transl_table=11 DALFDA020000032.1 tpg gene 16705 18003 . + . ID=gene-O5C65_004128;Name=O5C65_004128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004128 DALFDA020000032.1 Protein Homology CDS 16705 18003 . + 0 ID=cds-HJH9174158.1;Parent=gene-O5C65_004128;Dbxref=NCBI_GP:HJH9174158.1;Name=HJH9174158.1;Ontology_term=GO:0000287,GO:0005524,GO:0042803;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001121878.1;locus_tag=O5C65_004128;product=Fic family protein;protein_id=HJH9174158.1;transl_table=11 DALFDA020000032.1 tpg gene 18236 18934 . + . ID=gene-O5C65_004129;Name=O5C65_004129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004129 DALFDA020000032.1 Protein Homology CDS 18236 18934 . + 0 ID=cds-HJH9174159.1;Parent=gene-O5C65_004129;Dbxref=NCBI_GP:HJH9174159.1;Name=HJH9174159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001287071.1;locus_tag=O5C65_004129;product=PFL_4669 family integrating conjugative element protein;protein_id=HJH9174159.1;transl_table=11 DALFDA020000032.1 tpg gene 18924 19418 . + . ID=gene-O5C65_004130;Name=O5C65_004130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004130 DALFDA020000032.1 Protein Homology CDS 18924 19418 . + 0 ID=cds-HJH9174160.1;Parent=gene-O5C65_004130;Dbxref=NCBI_GP:HJH9174160.1;Name=HJH9174160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000981778.1;locus_tag=O5C65_004130;product=DUF3158 family protein;protein_id=HJH9174160.1;transl_table=11 DALFDA020000032.1 tpg gene 19467 19742 . - . ID=gene-O5C65_004131;Name=O5C65_004131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004131 DALFDA020000032.1 Protein Homology CDS 19467 19742 . - 0 ID=cds-HJH9174161.1;Parent=gene-O5C65_004131;Dbxref=NCBI_GP:HJH9174161.1;Name=HJH9174161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748807.1;locus_tag=O5C65_004131;product=hypothetical protein;protein_id=HJH9174161.1;transl_table=11 DALFDA020000032.1 tpg gene 19984 20400 . + . ID=gene-O5C65_004132;Name=O5C65_004132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004132 DALFDA020000032.1 Protein Homology CDS 19984 20400 . + 0 ID=cds-HJH9174162.1;Parent=gene-O5C65_004132;Dbxref=NCBI_GP:HJH9174162.1;Name=HJH9174162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291902.1;locus_tag=O5C65_004132;product=STY4534 family ICE replication protein;protein_id=HJH9174162.1;transl_table=11 DALFDA020000032.1 tpg gene 20533 20826 . + . ID=gene-O5C65_004133;Name=O5C65_004133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004133 DALFDA020000032.1 Protein Homology CDS 20533 20826 . + 0 ID=cds-HJH9174163.1;Parent=gene-O5C65_004133;Dbxref=NCBI_GP:HJH9174163.1;Name=HJH9174163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884201.1;locus_tag=O5C65_004133;product=YciI family protein;protein_id=HJH9174163.1;transl_table=11 DALFDA020000032.1 tpg gene 21061 21525 . + . ID=gene-O5C65_004134;Name=O5C65_004134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004134 DALFDA020000032.1 Protein Homology CDS 21061 21525 . + 0 ID=cds-HJH9174164.1;Parent=gene-O5C65_004134;Dbxref=NCBI_GP:HJH9174164.1;Name=HJH9174164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000101250.1;locus_tag=O5C65_004134;product=response regulator;protein_id=HJH9174164.1;transl_table=11 DALFDA020000032.1 tpg gene 21518 22126 . + . ID=gene-O5C65_004135;Name=O5C65_004135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004135 DALFDA020000032.1 Protein Homology CDS 21518 22126 . + 0 ID=cds-HJH9174165.1;Parent=gene-O5C65_004135;Dbxref=NCBI_GP:HJH9174165.1;Name=HJH9174165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003830147.1;locus_tag=O5C65_004135;product=hypothetical protein;protein_id=HJH9174165.1;transl_table=11 DALFDA020000032.1 tpg gene 22133 22783 . + . ID=gene-O5C65_004136;Name=O5C65_004136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004136 DALFDA020000032.1 Protein Homology CDS 22133 22783 . + 0 ID=cds-HJH9174166.1;Parent=gene-O5C65_004136;Dbxref=NCBI_GP:HJH9174166.1;Name=HJH9174166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001255483.1;locus_tag=O5C65_004136;product=TIGR03759 family integrating conjugative element protein;protein_id=HJH9174166.1;transl_table=11 DALFDA020000032.1 tpg gene 22759 23289 . + . ID=gene-O5C65_004137;Name=O5C65_004137;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004137 DALFDA020000032.1 Protein Homology CDS 22759 23289 . + 0 ID=cds-HJH9174167.1;Parent=gene-O5C65_004137;Dbxref=NCBI_GP:HJH9174167.1;Name=HJH9174167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168345.1;locus_tag=O5C65_004137;product=transglycosylase;protein_id=HJH9174167.1;transl_table=11 DALFDA020000032.1 tpg gene 23286 23693 . + . ID=gene-O5C65_004138;Name=O5C65_004138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004138 DALFDA020000032.1 Protein Homology CDS 23286 23693 . + 0 ID=cds-HJH9174168.1;Parent=gene-O5C65_004138;Dbxref=NCBI_GP:HJH9174168.1;Name=HJH9174168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000681572.1;locus_tag=O5C65_004138;product=integrating conjugative element protein;protein_id=HJH9174168.1;transl_table=11 DALFDA020000032.1 tpg gene 23690 25723 . + . ID=gene-O5C65_004139;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=O5C65_004139 DALFDA020000032.1 Protein Homology CDS 23690 25723 . + 0 ID=cds-HJH9174169.1;Parent=gene-O5C65_004139;Dbxref=NCBI_GP:HJH9174169.1;Name=HJH9174169.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015368505.1;locus_tag=O5C65_004139;product=type IV conjugative transfer system coupling protein TraD;protein_id=HJH9174169.1;transl_table=11 DALFDA020000032.1 tpg gene 25686 25952 . + . ID=gene-O5C65_004140;Name=O5C65_004140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004140 DALFDA020000032.1 Protein Homology CDS 25686 25952 . + 0 ID=cds-HJH9174170.1;Parent=gene-O5C65_004140;Dbxref=NCBI_GP:HJH9174170.1;Name=HJH9174170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005289972.1;locus_tag=O5C65_004140;product=hypothetical protein;protein_id=HJH9174170.1;transl_table=11 DALFDA020000032.1 tpg gene 25952 26632 . + . ID=gene-O5C65_004141;Name=O5C65_004141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004141 DALFDA020000032.1 Protein Homology CDS 25952 26632 . + 0 ID=cds-HJH9174171.1;Parent=gene-O5C65_004141;Dbxref=NCBI_GP:HJH9174171.1;Name=HJH9174171.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003830158.1;locus_tag=O5C65_004141;product=TIGR03747 family integrating conjugative element membrane protein;protein_id=HJH9174171.1;transl_table=11 DALFDA020000032.1 tpg gene 26763 27536 . + . ID=gene-O5C65_004142;Name=O5C65_004142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004142 DALFDA020000032.1 Protein Homology CDS 26763 27536 . + 0 ID=cds-HJH9174172.1;Parent=gene-O5C65_004142;Dbxref=NCBI_GP:HJH9174172.1;Name=HJH9174172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001695295.1;locus_tag=O5C65_004142;product=type IV toxin-antitoxin system AbiEi family antitoxin;protein_id=HJH9174172.1;transl_table=11 DALFDA020000032.1 tpg gene 27529 28446 . + . ID=gene-O5C65_004143;Name=O5C65_004143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004143 DALFDA020000032.1 Protein Homology CDS 27529 28446 . + 0 ID=cds-HJH9174173.1;Parent=gene-O5C65_004143;Dbxref=NCBI_GP:HJH9174173.1;Name=HJH9174173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224627.1;locus_tag=O5C65_004143;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=HJH9174173.1;transl_table=11 DALFDA020000032.1 tpg gene 28521 28793 . + . ID=gene-O5C65_004144;Name=O5C65_004144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004144 DALFDA020000032.1 Protein Homology CDS 28521 28793 . + 0 ID=cds-HJH9174174.1;Parent=gene-O5C65_004144;Dbxref=NCBI_GP:HJH9174174.1;Name=HJH9174174.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025706.6;locus_tag=O5C65_004144;product=DUF4400 domain-containing protein;protein_id=HJH9174174.1;transl_table=11 DALFDA020000032.1 tpg gene 28810 29235 . + . ID=gene-O5C65_004145;Name=O5C65_004145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004145 DALFDA020000032.1 GeneMarkS-2+ CDS 28810 29235 . + 0 ID=cds-HJH9174175.1;Parent=gene-O5C65_004145;Dbxref=NCBI_GP:HJH9174175.1;Name=HJH9174175.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004145;product=hypothetical protein;protein_id=HJH9174175.1;transl_table=11 DALFDA020000032.1 tpg gene 29380 30345 . + . ID=gene-O5C65_004146;Name=O5C65_004146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004146 DALFDA020000032.1 Protein Homology CDS 29380 30345 . + 0 ID=cds-HJH9174176.1;Parent=gene-O5C65_004146;Dbxref=NCBI_GP:HJH9174176.1;Name=HJH9174176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242506.1;locus_tag=O5C65_004146;product=SIR2 family protein;protein_id=HJH9174176.1;transl_table=11 DALFDA020000032.1 tpg gene 30425 30739 . + . ID=gene-O5C65_004147;Name=O5C65_004147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004147 DALFDA020000032.1 Protein Homology CDS 30425 30739 . + 0 ID=cds-HJH9174177.1;Parent=gene-O5C65_004147;Dbxref=NCBI_GP:HJH9174177.1;Name=HJH9174177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000873300.1;locus_tag=O5C65_004147;product=RAQPRD family integrative conjugative element protein;protein_id=HJH9174177.1;transl_table=11 DALFDA020000032.1 tpg gene 30736 30969 . + . ID=gene-O5C65_004148;Name=O5C65_004148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004148 DALFDA020000032.1 Protein Homology CDS 30736 30969 . + 0 ID=cds-HJH9174178.1;Parent=gene-O5C65_004148;Dbxref=NCBI_GP:HJH9174178.1;Name=HJH9174178.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686466.1;locus_tag=O5C65_004148;product=TIGR03758 family integrating conjugative element protein;protein_id=HJH9174178.1;transl_table=11 DALFDA020000032.1 tpg gene 30988 31314 . + . ID=gene-O5C65_004149;Name=O5C65_004149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004149 DALFDA020000032.1 Protein Homology CDS 30988 31314 . + 0 ID=cds-HJH9174179.1;Parent=gene-O5C65_004149;Dbxref=NCBI_GP:HJH9174179.1;Name=HJH9174179.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716176.1;locus_tag=O5C65_004149;product=TIGR03745 family integrating conjugative element membrane protein;protein_id=HJH9174179.1;transl_table=11 DALFDA020000032.1 tpg gene 31318 31671 . + . ID=gene-O5C65_004150;Name=O5C65_004150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004150 DALFDA020000032.1 Protein Homology CDS 31318 31671 . + 0 ID=cds-HJH9174180.1;Parent=gene-O5C65_004150;Dbxref=NCBI_GP:HJH9174180.1;Name=HJH9174180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000104332.1;locus_tag=O5C65_004150;product=TIGR03750 family conjugal transfer protein;protein_id=HJH9174180.1;transl_table=11 DALFDA020000032.1 tpg gene 31668 32294 . + . ID=gene-O5C65_004151;Name=O5C65_004151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004151 DALFDA020000032.1 Protein Homology CDS 31668 32294 . + 0 ID=cds-HJH9174181.1;Parent=gene-O5C65_004151;Dbxref=NCBI_GP:HJH9174181.1;Name=HJH9174181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686463.1;locus_tag=O5C65_004151;product=PFL_4703 family integrating conjugative element protein;protein_id=HJH9174181.1;transl_table=11 DALFDA020000032.1 tpg gene 32291 33079 . + . ID=gene-O5C65_004152;Name=O5C65_004152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004152 DALFDA020000032.1 Protein Homology CDS 32291 33079 . + 0 ID=cds-HJH9174182.1;Parent=gene-O5C65_004152;Dbxref=NCBI_GP:HJH9174182.1;Name=HJH9174182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862970.1;locus_tag=O5C65_004152;product=TIGR03749 family integrating conjugative element protein;protein_id=HJH9174182.1;transl_table=11 DALFDA020000032.1 tpg gene 33076 34413 . + . ID=gene-O5C65_004153;Name=O5C65_004153;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004153 DALFDA020000032.1 Protein Homology CDS 33076 34413 . + 0 ID=cds-HJH9174183.1;Parent=gene-O5C65_004153;Dbxref=NCBI_GP:HJH9174183.1;Name=HJH9174183.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686461.1;locus_tag=O5C65_004153;product=TIGR03752 family integrating conjugative element protein;protein_id=HJH9174183.1;transl_table=11 DALFDA020000032.1 tpg gene 34413 34802 . + . ID=gene-O5C65_004154;Name=O5C65_004154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004154 DALFDA020000032.1 Protein Homology CDS 34413 34802 . + 0 ID=cds-HJH9174184.1;Parent=gene-O5C65_004154;Dbxref=NCBI_GP:HJH9174184.1;Name=HJH9174184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001221377.1;locus_tag=O5C65_004154;product=TIGR03751 family conjugal transfer lipoprotein;protein_id=HJH9174184.1;transl_table=11 DALFDA020000032.1 tpg gene 34802 37453 . + . ID=gene-O5C65_004155;Name=O5C65_004155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004155 DALFDA020000032.1 Protein Homology CDS 34802 37453 . + 0 ID=cds-HJH9174185.1;Parent=gene-O5C65_004155;Dbxref=NCBI_GP:HJH9174185.1;Name=HJH9174185.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750567.1;locus_tag=O5C65_004155;product=conjugative transfer ATPase;protein_id=HJH9174185.1;transl_table=11 DALFDA020000032.1 tpg gene 37830 38723 . - . ID=gene-O5C65_004156;Name=O5C65_004156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004156 DALFDA020000032.1 GeneMarkS-2+ CDS 37830 38723 . - 0 ID=cds-HJH9174186.1;Parent=gene-O5C65_004156;Dbxref=NCBI_GP:HJH9174186.1;Name=HJH9174186.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004156;product=hypothetical protein;protein_id=HJH9174186.1;transl_table=11 DALFDA020000032.1 tpg gene 38888 40240 . - . ID=gene-O5C65_004157;Name=O5C65_004157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004157 DALFDA020000032.1 Protein Homology CDS 38888 40240 . - 0 ID=cds-HJH9174187.1;Parent=gene-O5C65_004157;Dbxref=NCBI_GP:HJH9174187.1;Name=HJH9174187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750564.1;locus_tag=O5C65_004157;product=hypothetical protein;protein_id=HJH9174187.1;transl_table=11 DALFDA020000032.1 tpg gene 40359 40685 . - . ID=gene-O5C65_004158;Name=O5C65_004158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004158 DALFDA020000032.1 Protein Homology CDS 40359 40685 . - 0 ID=cds-HJH9174188.1;Parent=gene-O5C65_004158;Dbxref=NCBI_GP:HJH9174188.1;Name=HJH9174188.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686826.1;locus_tag=O5C65_004158;product=helix-turn-helix domain-containing protein;protein_id=HJH9174188.1;transl_table=11 DALFDA020000032.1 tpg gene 40761 41105 . - . ID=gene-O5C65_004159;Name=O5C65_004159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004159 DALFDA020000032.1 Protein Homology CDS 40761 41105 . - 0 ID=cds-HJH9174189.1;Parent=gene-O5C65_004159;Dbxref=NCBI_GP:HJH9174189.1;Name=HJH9174189.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001172095.1;locus_tag=O5C65_004159;product=helix-turn-helix domain-containing protein;protein_id=HJH9174189.1;transl_table=11 DALFDA020000032.1 tpg gene 41183 41443 . + . ID=gene-O5C65_004160;Name=O5C65_004160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004160 DALFDA020000032.1 Protein Homology CDS 41183 41443 . + 0 ID=cds-HJH9174190.1;Parent=gene-O5C65_004160;Dbxref=NCBI_GP:HJH9174190.1;Name=HJH9174190.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000165918.1;locus_tag=O5C65_004160;product=helix-turn-helix domain-containing protein;protein_id=HJH9174190.1;transl_table=11 DALFDA020000032.1 tpg gene 41440 42165 . + . ID=gene-O5C65_004161;Name=O5C65_004161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004161 DALFDA020000032.1 Protein Homology CDS 41440 42165 . + 0 ID=cds-HJH9174191.1;Parent=gene-O5C65_004161;Dbxref=NCBI_GP:HJH9174191.1;Name=HJH9174191.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000632378.1;locus_tag=O5C65_004161;product=Crp/Fnr family transcriptional regulator;protein_id=HJH9174191.1;transl_table=11 DALFDA020000032.1 tpg gene 42132 43313 . - . ID=gene-O5C65_004162;Name=O5C65_004162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004162 DALFDA020000032.1 Protein Homology CDS 42132 43313 . - 0 ID=cds-HJH9174192.1;Parent=gene-O5C65_004162;Dbxref=NCBI_GP:HJH9174192.1;Name=HJH9174192.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156760.1;locus_tag=O5C65_004162;product=anaerobic sulfatase maturase;protein_id=HJH9174192.1;transl_table=11 DALFDA020000032.1 tpg gene 43310 44110 . - . ID=gene-O5C65_004163;Name=O5C65_004163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004163 DALFDA020000032.1 Protein Homology CDS 43310 44110 . - 0 ID=cds-HJH9174193.1;Parent=gene-O5C65_004163;Dbxref=NCBI_GP:HJH9174193.1;Name=HJH9174193.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000127870.1;locus_tag=O5C65_004163;product=sulfite exporter TauE/SafE family protein;protein_id=HJH9174193.1;transl_table=11 DALFDA020000032.1 tpg gene 44114 45406 . - . ID=gene-O5C65_004164;Name=O5C65_004164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004164 DALFDA020000032.1 Protein Homology CDS 44114 45406 . - 0 ID=cds-HJH9174194.1;Parent=gene-O5C65_004164;Dbxref=NCBI_GP:HJH9174194.1;Name=HJH9174194.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750558.1;locus_tag=O5C65_004164;product=sulfatase-like hydrolase/transferase;protein_id=HJH9174194.1;transl_table=11 DALFDA020000032.1 tpg gene 45420 46664 . - . ID=gene-O5C65_004165;Name=O5C65_004165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004165 DALFDA020000032.1 Protein Homology CDS 45420 46664 . - 0 ID=cds-HJH9174195.1;Parent=gene-O5C65_004165;Dbxref=NCBI_GP:HJH9174195.1;Name=HJH9174195.1;Ontology_term=GO:0008643,GO:0005351,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001007556.1;locus_tag=O5C65_004165;product=oligosaccharide MFS transporter;protein_id=HJH9174195.1;transl_table=11 DALFDA020000032.1 tpg gene 46939 50088 . + . ID=gene-O5C65_004166;Name=O5C65_004166;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004166 DALFDA020000032.1 Protein Homology CDS 46939 50088 . + 0 ID=cds-HJH9174196.1;Parent=gene-O5C65_004166;Dbxref=NCBI_GP:HJH9174196.1;Name=HJH9174196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001607975.1;locus_tag=O5C65_004166;product=alpha-N-acetylglucosaminidase TIM-barrel domain-containing protein;protein_id=HJH9174196.1;transl_table=11 DALFDA020000032.1 tpg gene 50153 51160 . + . ID=gene-O5C65_004167;Name=O5C65_004167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004167 DALFDA020000032.1 Protein Homology CDS 50153 51160 . + 0 ID=cds-HJH9174197.1;Parent=gene-O5C65_004167;Dbxref=NCBI_GP:HJH9174197.1;Name=HJH9174197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003830207.1;locus_tag=O5C65_004167;product=OmpG family monomeric porin;protein_id=HJH9174197.1;transl_table=11 DALFDA020000032.1 tpg gene 51176 52552 . + . ID=gene-O5C65_004168;Name=O5C65_004168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004168 DALFDA020000032.1 Protein Homology CDS 51176 52552 . + 0 ID=cds-HJH9174198.1;Parent=gene-O5C65_004168;Dbxref=NCBI_GP:HJH9174198.1;Name=HJH9174198.1;Ontology_term=GO:0005975,GO:0004553,GO:0030246;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000106731.1;locus_tag=O5C65_004168;product=glycoside hydrolase family 16 protein;protein_id=HJH9174198.1;transl_table=11 DALFDA020000032.1 tpg gene 52671 53606 . + . ID=gene-O5C65_004169;Name=O5C65_004169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004169 DALFDA020000032.1 Protein Homology CDS 52671 53606 . + 0 ID=cds-HJH9174199.1;Parent=gene-O5C65_004169;Dbxref=NCBI_GP:HJH9174199.1;Name=HJH9174199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001607974.1;locus_tag=O5C65_004169;product=TIGR03756 family integrating conjugative element protein;protein_id=HJH9174199.1;transl_table=11 DALFDA020000032.1 tpg gene 53609 54976 . + . ID=gene-O5C65_004170;Name=O5C65_004170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004170 DALFDA020000032.1 Protein Homology CDS 53609 54976 . + 0 ID=cds-HJH9174200.1;Parent=gene-O5C65_004170;Dbxref=NCBI_GP:HJH9174200.1;Name=HJH9174200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686442.1;locus_tag=O5C65_004170;product=integrating conjugative element protein;protein_id=HJH9174200.1;transl_table=11 DALFDA020000032.1 tpg gene 54973 55230 . + . ID=gene-O5C65_004171;Name=O5C65_004171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004171 DALFDA020000032.1 Protein Homology CDS 54973 55230 . + 0 ID=cds-HJH9174201.1;Parent=gene-O5C65_004171;Dbxref=NCBI_GP:HJH9174201.1;Name=HJH9174201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686441.1;locus_tag=O5C65_004171;product=hypothetical protein;protein_id=HJH9174201.1;transl_table=11 DALFDA020000032.1 tpg gene 55227 56610 . + . ID=gene-O5C65_004172;Name=O5C65_004172;end_range=56610,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004172;partial=true DALFDA020000032.1 Protein Homology CDS 55227 56610 . + 0 ID=cds-HJH9174202.1;Parent=gene-O5C65_004172;Dbxref=NCBI_GP:HJH9174202.1;Name=HJH9174202.1;end_range=56610,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210717.1;locus_tag=O5C65_004172;partial=true;product=conjugal transfer protein TraG N-terminal domain-containing protein;protein_id=HJH9174202.1;transl_table=11 ##sequence-region DALFDA020000033.1 1 53506 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000033.1 tpg region 1 53506 . + . ID=DALFDA020000033.1:1..53506;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000033.1 tpg gene 1 648 . + . ID=gene-O5C65_004173;Name=O5C65_004173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004173;partial=true;start_range=.,1 DALFDA020000033.1 Protein Homology CDS 1 648 . + 0 ID=cds-HJH9174203.1;Parent=gene-O5C65_004173;Dbxref=NCBI_GP:HJH9174203.1;Name=HJH9174203.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=O5C65_004173;partial=true;product=tetratricopeptide repeat protein;protein_id=HJH9174203.1;start_range=.,1;transl_table=11 DALFDA020000033.1 tpg gene 770 1996 . + . ID=gene-O5C65_004174;Name=O5C65_004174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004174 DALFDA020000033.1 Protein Homology CDS 770 1996 . + 0 ID=cds-HJH9174204.1;Parent=gene-O5C65_004174;Dbxref=NCBI_GP:HJH9174204.1;Name=HJH9174204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462711.1;locus_tag=O5C65_004174;product=DUF3748 domain-containing protein;protein_id=HJH9174204.1;transl_table=11 DALFDA020000033.1 tpg gene 1998 2330 . - . ID=gene-O5C65_004175;Name=O5C65_004175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004175 DALFDA020000033.1 Protein Homology CDS 1998 2330 . - 0 ID=cds-HJH9174205.1;Parent=gene-O5C65_004175;Dbxref=NCBI_GP:HJH9174205.1;Name=HJH9174205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675643.1;locus_tag=O5C65_004175;product=YceK/YidQ family lipoprotein;protein_id=HJH9174205.1;transl_table=11 DALFDA020000033.1 cmsearch sequence_feature 2573 2646 . + . ID=id-DALFDA020000033.1:2573..2646;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 DALFDA020000033.1 tpg gene 2640 3053 . + . ID=gene-O5C65_004176;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=O5C65_004176 DALFDA020000033.1 Protein Homology CDS 2640 3053 . + 0 ID=cds-HJH9174206.1;Parent=gene-O5C65_004176;Dbxref=NCBI_GP:HJH9174206.1;Name=HJH9174206.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpA;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=O5C65_004176;product=small heat shock chaperone IbpA;protein_id=HJH9174206.1;transl_table=11 DALFDA020000033.1 tpg gene 3163 3591 . + . ID=gene-O5C65_004177;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=O5C65_004177 DALFDA020000033.1 Protein Homology CDS 3163 3591 . + 0 ID=cds-HJH9174207.1;Parent=gene-O5C65_004177;Dbxref=NCBI_GP:HJH9174207.1;Name=HJH9174207.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpB;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462708.3;locus_tag=O5C65_004177;product=small heat shock chaperone IbpB;protein_id=HJH9174207.1;transl_table=11 DALFDA020000033.1 tpg gene 3780 5441 . + . ID=gene-O5C65_004178;Name=O5C65_004178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004178 DALFDA020000033.1 Protein Homology CDS 3780 5441 . + 0 ID=cds-HJH9174208.1;Parent=gene-O5C65_004178;Dbxref=NCBI_GP:HJH9174208.1;Name=HJH9174208.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462707.1;locus_tag=O5C65_004178;product=putative transporter;protein_id=HJH9174208.1;transl_table=11 DALFDA020000033.1 tpg gene 5884 6231 . + . ID=gene-O5C65_004179;Name=O5C65_004179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004179 DALFDA020000033.1 Protein Homology CDS 5884 6231 . + 0 ID=cds-HJH9174209.1;Parent=gene-O5C65_004179;Dbxref=NCBI_GP:HJH9174209.1;Name=HJH9174209.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462706.1;locus_tag=O5C65_004179;product=YidH family protein;protein_id=HJH9174209.1;transl_table=11 DALFDA020000033.1 tpg gene 6221 6583 . + . ID=gene-O5C65_004180;Name=O5C65_004180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004180 DALFDA020000033.1 Protein Homology CDS 6221 6583 . + 0 ID=cds-HJH9174210.1;Parent=gene-O5C65_004180;Dbxref=NCBI_GP:HJH9174210.1;Name=HJH9174210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462705.1;locus_tag=O5C65_004180;product=DUF202 domain-containing protein;protein_id=HJH9174210.1;transl_table=11 DALFDA020000033.1 tpg gene 6580 7110 . + . ID=gene-O5C65_004181;Name=O5C65_004181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004181 DALFDA020000033.1 Protein Homology CDS 6580 7110 . + 0 ID=cds-HJH9174211.1;Parent=gene-O5C65_004181;Dbxref=NCBI_GP:HJH9174211.1;Name=HJH9174211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462704.1;locus_tag=O5C65_004181;product=radical SAM protein;protein_id=HJH9174211.1;transl_table=11 DALFDA020000033.1 tpg gene 7192 8514 . - . ID=gene-O5C65_004182;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=O5C65_004182 DALFDA020000033.1 Protein Homology CDS 7192 8514 . - 0 ID=cds-HJH9174212.1;Parent=gene-O5C65_004182;Dbxref=NCBI_GP:HJH9174212.1;Name=HJH9174212.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;gbkey=CDS;gene=dsdA;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462703.1;locus_tag=O5C65_004182;product=D-serine ammonia-lyase;protein_id=HJH9174212.1;transl_table=11 DALFDA020000033.1 tpg gene 8532 9869 . - . ID=gene-O5C65_004183;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=O5C65_004183 DALFDA020000033.1 Protein Homology CDS 8532 9869 . - 0 ID=cds-HJH9174213.1;Parent=gene-O5C65_004183;Dbxref=NCBI_GP:HJH9174213.1;Name=HJH9174213.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462702.1;locus_tag=O5C65_004183;product=D-serine transporter DsdX;protein_id=HJH9174213.1;transl_table=11 DALFDA020000033.1 tpg gene 10095 11018 . + . ID=gene-O5C65_004184;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=O5C65_004184 DALFDA020000033.1 Protein Homology CDS 10095 11018 . + 0 ID=cds-HJH9174214.1;Parent=gene-O5C65_004184;Dbxref=NCBI_GP:HJH9174214.1;Name=HJH9174214.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=dsdC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462701.1;locus_tag=O5C65_004184;product=DNA-binding transcriptional regulator DsdC;protein_id=HJH9174214.1;transl_table=11 DALFDA020000033.1 tpg gene 11082 12167 . + . ID=gene-O5C65_004185;Name=O5C65_004185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004185 DALFDA020000033.1 Protein Homology CDS 11082 12167 . + 0 ID=cds-HJH9174215.1;Parent=gene-O5C65_004185;Dbxref=NCBI_GP:HJH9174215.1;Name=HJH9174215.1;Ontology_term=GO:0000272,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462700.1;locus_tag=O5C65_004185;product=cellulase family glycosylhydrolase;protein_id=HJH9174215.1;transl_table=11 DALFDA020000033.1 tpg gene 12094 13278 . - . ID=gene-O5C65_004186;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=O5C65_004186 DALFDA020000033.1 Protein Homology CDS 12094 13278 . - 0 ID=cds-HJH9174216.1;Parent=gene-O5C65_004186;Dbxref=NCBI_GP:HJH9174216.1;Name=HJH9174216.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462699.1;locus_tag=O5C65_004186;product=multidrug efflux MFS transporter EmrD;protein_id=HJH9174216.1;transl_table=11 DALFDA020000033.1 tpg gene 13481 14341 . - . ID=gene-O5C65_004187;Name=O5C65_004187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004187 DALFDA020000033.1 Protein Homology CDS 13481 14341 . - 0 ID=cds-HJH9174217.1;Parent=gene-O5C65_004187;Dbxref=NCBI_GP:HJH9174217.1;Name=HJH9174217.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462698.3;locus_tag=O5C65_004187;product=EamA family transporter;protein_id=HJH9174217.1;transl_table=11 DALFDA020000033.1 tpg gene 14434 14523 . - . ID=gene-O5C65_004188;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=O5C65_004188 DALFDA020000033.1 Protein Homology CDS 14434 14523 . - 0 ID=cds-HJH9174218.1;Parent=gene-O5C65_004188;Dbxref=NCBI_GP:HJH9174218.1;Name=HJH9174218.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453107.1;locus_tag=O5C65_004188;product=type I toxin-antitoxin system toxin TisB;protein_id=HJH9174218.1;transl_table=11 DALFDA020000033.1 tpg pseudogene 14520 14634 . - . ID=gene-O5C65_004189;Name=O5C65_004189;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004189;pseudo=true DALFDA020000033.1 Protein Homology CDS 14520 14634 . - 0 ID=cds-O5C65_004189;Parent=gene-O5C65_004189;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009325922.1;locus_tag=O5C65_004189;product=hypothetical protein;pseudo=true;transl_table=11 DALFDA020000033.1 tpg gene 15157 15255 . + . ID=gene-O5C65_004190;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=O5C65_004190 DALFDA020000033.1 Protein Homology CDS 15157 15255 . + 0 ID=cds-HJH9174219.1;Parent=gene-O5C65_004190;Dbxref=NCBI_GP:HJH9174219.1;Name=HJH9174219.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462696.1;locus_tag=O5C65_004190;product=ilvB operon leader peptide IvbL;protein_id=HJH9174219.1;transl_table=11 DALFDA020000033.1 tpg gene 15362 17050 . + . ID=gene-O5C65_004191;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=O5C65_004191 DALFDA020000033.1 Protein Homology CDS 15362 17050 . + 0 ID=cds-HJH9174220.1;Parent=gene-O5C65_004191;Dbxref=NCBI_GP:HJH9174220.1;Name=HJH9174220.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462695.1;locus_tag=O5C65_004191;product=acetolactate synthase large subunit;protein_id=HJH9174220.1;transl_table=11 DALFDA020000033.1 tpg gene 17054 17344 . + . ID=gene-O5C65_004192;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=O5C65_004192 DALFDA020000033.1 Protein Homology CDS 17054 17344 . + 0 ID=cds-HJH9174221.1;Parent=gene-O5C65_004192;Dbxref=NCBI_GP:HJH9174221.1;Name=HJH9174221.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462694.1;locus_tag=O5C65_004192;product=acetolactate synthase small subunit;protein_id=HJH9174221.1;transl_table=11 DALFDA020000033.1 tpg gene 17346 18131 . - . ID=gene-O5C65_004193;Name=O5C65_004193;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004193 DALFDA020000033.1 Protein Homology CDS 17346 18131 . - 0 ID=cds-HJH9174222.1;Parent=gene-O5C65_004193;Dbxref=NCBI_GP:HJH9174222.1;Name=HJH9174222.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462693.1;locus_tag=O5C65_004193;product=DeoR family transcriptional regulator;protein_id=HJH9174222.1;transl_table=11 DALFDA020000033.1 tpg gene 18456 19376 . + . ID=gene-O5C65_004194;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=O5C65_004194 DALFDA020000033.1 Protein Homology CDS 18456 19376 . + 0 ID=cds-HJH9174223.1;Parent=gene-O5C65_004194;Dbxref=NCBI_GP:HJH9174223.1;Name=HJH9174223.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462692.1;locus_tag=O5C65_004194;product=ribokinase;protein_id=HJH9174223.1;transl_table=11 DALFDA020000033.1 tpg gene 19407 20723 . + . ID=gene-O5C65_004195;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=O5C65_004195 DALFDA020000033.1 Protein Homology CDS 19407 20723 . + 0 ID=cds-HJH9174224.1;Parent=gene-O5C65_004195;Dbxref=NCBI_GP:HJH9174224.1;Name=HJH9174224.1;Ontology_term=GO:0015756,GO:0015150,GO:0015535;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA,fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462691.1;locus_tag=O5C65_004195;product=L-fucose:H+ symporter permease;protein_id=HJH9174224.1;transl_table=11 DALFDA020000033.1 tpg gene 20735 21748 . + . ID=gene-O5C65_004196;Name=O5C65_004196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004196 DALFDA020000033.1 Protein Homology CDS 20735 21748 . + 0 ID=cds-HJH9174225.1;Parent=gene-O5C65_004196;Dbxref=NCBI_GP:HJH9174225.1;Name=HJH9174225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462690.1;locus_tag=O5C65_004196;product=aldose 1-epimerase family protein;protein_id=HJH9174225.1;transl_table=11 DALFDA020000033.1 tpg gene 21902 22492 . + . ID=gene-O5C65_004197;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=O5C65_004197 DALFDA020000033.1 Protein Homology CDS 21902 22492 . + 0 ID=cds-HJH9174226.1;Parent=gene-O5C65_004197;Dbxref=NCBI_GP:HJH9174226.1;Name=HJH9174226.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462689.1;locus_tag=O5C65_004197;product=transcriptional regulator UhpA;protein_id=HJH9174226.1;transl_table=11 DALFDA020000033.1 tpg gene 22492 23994 . + . ID=gene-O5C65_004198;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=O5C65_004198 DALFDA020000033.1 Protein Homology CDS 22492 23994 . + 0 ID=cds-HJH9174227.1;Parent=gene-O5C65_004198;Dbxref=NCBI_GP:HJH9174227.1;Name=HJH9174227.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462688.1;locus_tag=O5C65_004198;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=HJH9174227.1;transl_table=11 DALFDA020000033.1 tpg gene 24004 25332 . + . ID=gene-O5C65_004199;Name=O5C65_004199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004199 DALFDA020000033.1 Protein Homology CDS 24004 25332 . + 0 ID=cds-HJH9174228.1;Parent=gene-O5C65_004199;Dbxref=NCBI_GP:HJH9174228.1;Name=HJH9174228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462687.1;locus_tag=O5C65_004199;product=MFS transporter;protein_id=HJH9174228.1;transl_table=11 DALFDA020000033.1 tpg gene 25475 26866 . + . ID=gene-O5C65_004200;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=O5C65_004200 DALFDA020000033.1 Protein Homology CDS 25475 26866 . + 0 ID=cds-HJH9174229.1;Parent=gene-O5C65_004200;Dbxref=NCBI_GP:HJH9174229.1;Name=HJH9174229.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462686.1;locus_tag=O5C65_004200;product=hexose-6-phosphate:phosphate antiporter;protein_id=HJH9174229.1;transl_table=11 DALFDA020000033.1 tpg gene 27059 27511 . + . ID=gene-O5C65_004201;Name=O5C65_004201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004201 DALFDA020000033.1 Protein Homology CDS 27059 27511 . + 0 ID=cds-HJH9174230.1;Parent=gene-O5C65_004201;Dbxref=NCBI_GP:HJH9174230.1;Name=HJH9174230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462685.1;locus_tag=O5C65_004201;product=DUF1198 domain-containing protein;protein_id=HJH9174230.1;transl_table=11 DALFDA020000033.1 tpg gene 27864 28607 . + . ID=gene-O5C65_004202;Name=O5C65_004202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004202 DALFDA020000033.1 Protein Homology CDS 27864 28607 . + 0 ID=cds-HJH9174231.1;Parent=gene-O5C65_004202;Dbxref=NCBI_GP:HJH9174231.1;Name=HJH9174231.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462684.1;locus_tag=O5C65_004202;product=GntR family transcriptional regulator;protein_id=HJH9174231.1;transl_table=11 DALFDA020000033.1 tpg gene 28625 29098 . + . ID=gene-O5C65_004203;Name=O5C65_004203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004203 DALFDA020000033.1 Protein Homology CDS 28625 29098 . + 0 ID=cds-HJH9174232.1;Parent=gene-O5C65_004203;Dbxref=NCBI_GP:HJH9174232.1;Name=HJH9174232.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462683.1;locus_tag=O5C65_004203;product=PTS sugar transporter subunit IIA;protein_id=HJH9174232.1;transl_table=11 DALFDA020000033.1 tpg gene 29095 29382 . + . ID=gene-O5C65_004204;Name=O5C65_004204;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004204 DALFDA020000033.1 Protein Homology CDS 29095 29382 . + 0 ID=cds-HJH9174233.1;Parent=gene-O5C65_004204;Dbxref=NCBI_GP:HJH9174233.1;Name=HJH9174233.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462682.1;locus_tag=O5C65_004204;product=PTS sugar transporter subunit IIB;protein_id=HJH9174233.1;transl_table=11 DALFDA020000033.1 tpg gene 29458 30816 . + . ID=gene-O5C65_004205;Name=O5C65_004205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004205 DALFDA020000033.1 Protein Homology CDS 29458 30816 . + 0 ID=cds-HJH9174234.1;Parent=gene-O5C65_004205;Dbxref=NCBI_GP:HJH9174234.1;Name=HJH9174234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462681.1;locus_tag=O5C65_004205;product=PTS galactitol transporter subunit IIC;protein_id=HJH9174234.1;transl_table=11 DALFDA020000033.1 tpg gene 30809 32293 . + . ID=gene-O5C65_004206;Name=O5C65_004206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004206 DALFDA020000033.1 Protein Homology CDS 30809 32293 . + 0 ID=cds-HJH9174235.1;Parent=gene-O5C65_004206;Dbxref=NCBI_GP:HJH9174235.1;Name=HJH9174235.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462680.1;locus_tag=O5C65_004206;product=FGGY-family carbohydrate kinase;protein_id=HJH9174235.1;transl_table=11 DALFDA020000033.1 tpg gene 32356 33216 . + . ID=gene-O5C65_004207;Name=O5C65_004207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004207 DALFDA020000033.1 Protein Homology CDS 32356 33216 . + 0 ID=cds-HJH9174236.1;Parent=gene-O5C65_004207;Dbxref=NCBI_GP:HJH9174236.1;Name=HJH9174236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462679.1;locus_tag=O5C65_004207;product=class II aldolase;protein_id=HJH9174236.1;transl_table=11 DALFDA020000033.1 tpg gene 33226 33495 . + . ID=gene-O5C65_004208;Name=O5C65_004208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004208 DALFDA020000033.1 Protein Homology CDS 33226 33495 . + 0 ID=cds-HJH9174237.1;Parent=gene-O5C65_004208;Dbxref=NCBI_GP:HJH9174237.1;Name=HJH9174237.1;Ontology_term=GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462678.1;locus_tag=O5C65_004208;product=HPr family phosphocarrier protein;protein_id=HJH9174237.1;transl_table=11 DALFDA020000033.1 tpg gene 33657 33818 . + . ID=gene-O5C65_004209;Name=O5C65_004209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004209 DALFDA020000033.1 Protein Homology CDS 33657 33818 . + 0 ID=cds-HJH9174238.1;Parent=gene-O5C65_004209;Dbxref=NCBI_GP:HJH9174238.1;Name=HJH9174238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343619.1;locus_tag=O5C65_004209;product=hypothetical protein;protein_id=HJH9174238.1;transl_table=11 DALFDA020000033.1 tpg gene 33846 34625 . - . ID=gene-O5C65_004210;Name=O5C65_004210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004210 DALFDA020000033.1 Protein Homology CDS 33846 34625 . - 0 ID=cds-HJH9174239.1;Parent=gene-O5C65_004210;Dbxref=NCBI_GP:HJH9174239.1;Name=HJH9174239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002912948.1;locus_tag=O5C65_004210;product=LEM-3-like GIY-YIG domain-containing protein;protein_id=HJH9174239.1;transl_table=11 DALFDA020000033.1 tpg gene 34810 35133 . - . ID=gene-O5C65_004211;Name=O5C65_004211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004211 DALFDA020000033.1 Protein Homology CDS 34810 35133 . - 0 ID=cds-HJH9174240.1;Parent=gene-O5C65_004211;Dbxref=NCBI_GP:HJH9174240.1;Name=HJH9174240.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462677.1;locus_tag=O5C65_004211;product=helix-turn-helix domain-containing protein;protein_id=HJH9174240.1;transl_table=11 DALFDA020000033.1 tpg gene 35117 35476 . - . ID=gene-O5C65_004212;Name=O5C65_004212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004212 DALFDA020000033.1 Protein Homology CDS 35117 35476 . - 0 ID=cds-HJH9174241.1;Parent=gene-O5C65_004212;Dbxref=NCBI_GP:HJH9174241.1;Name=HJH9174241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462676.1;locus_tag=O5C65_004212;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=HJH9174241.1;transl_table=11 DALFDA020000033.1 tpg gene 35692 36885 . + . ID=gene-O5C65_004213;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=O5C65_004213 DALFDA020000033.1 Protein Homology CDS 35692 36885 . + 0 ID=cds-HJH9174242.1;Parent=gene-O5C65_004213;Dbxref=NCBI_GP:HJH9174242.1;Name=HJH9174242.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462675.1;locus_tag=O5C65_004213;product=purine ribonucleoside efflux pump NepI;protein_id=HJH9174242.1;transl_table=11 DALFDA020000033.1 tpg gene 36944 38326 . - . ID=gene-O5C65_004214;Name=O5C65_004214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004214 DALFDA020000033.1 Protein Homology CDS 36944 38326 . - 0 ID=cds-HJH9174243.1;Parent=gene-O5C65_004214;Dbxref=NCBI_GP:HJH9174243.1;Name=HJH9174243.1;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462674.1;locus_tag=O5C65_004214;product=glycoside hydrolase family 1 protein;protein_id=HJH9174243.1;transl_table=11 DALFDA020000033.1 tpg gene 38432 38725 . - . ID=gene-O5C65_004215;Name=O5C65_004215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004215 DALFDA020000033.1 Protein Homology CDS 38432 38725 . - 0 ID=cds-HJH9174244.1;Parent=gene-O5C65_004215;Dbxref=NCBI_GP:HJH9174244.1;Name=HJH9174244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462673.1;locus_tag=O5C65_004215;product=YicS family protein;protein_id=HJH9174244.1;transl_table=11 DALFDA020000033.1 tpg gene 38922 41720 . + . ID=gene-O5C65_004216;Name=dagR;gbkey=Gene;gene=dagR;gene_biotype=protein_coding;locus_tag=O5C65_004216 DALFDA020000033.1 Protein Homology CDS 38922 41720 . + 0 ID=cds-HJH9174245.1;Parent=gene-O5C65_004216;Dbxref=NCBI_GP:HJH9174245.1;Name=HJH9174245.1;Ontology_term=GO:0006355,GO:0009401,GO:0005524,GO:0016887;gbkey=CDS;gene=dagR;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=O5C65_004216;product=transcriptional regulator DagR;protein_id=HJH9174245.1;transl_table=11 DALFDA020000033.1 tpg gene 41939 42364 . + . ID=gene-O5C65_004217;Name=O5C65_004217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004217 DALFDA020000033.1 Protein Homology CDS 41939 42364 . + 0 ID=cds-HJH9174246.1;Parent=gene-O5C65_004217;Dbxref=NCBI_GP:HJH9174246.1;Name=HJH9174246.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462671.1;locus_tag=O5C65_004217;product=PTS sugar transporter subunit IIA;protein_id=HJH9174246.1;transl_table=11 DALFDA020000033.1 tpg gene 42375 42860 . + . ID=gene-O5C65_004218;Name=O5C65_004218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004218 DALFDA020000033.1 Protein Homology CDS 42375 42860 . + 0 ID=cds-HJH9174247.1;Parent=gene-O5C65_004218;Dbxref=NCBI_GP:HJH9174247.1;Name=HJH9174247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462670.1;locus_tag=O5C65_004218;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=HJH9174247.1;transl_table=11 DALFDA020000033.1 tpg gene 43006 43755 . + . ID=gene-O5C65_004219;Name=O5C65_004219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004219 DALFDA020000033.1 Protein Homology CDS 43006 43755 . + 0 ID=cds-HJH9174248.1;Parent=gene-O5C65_004219;Dbxref=NCBI_GP:HJH9174248.1;Name=HJH9174248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462669.1;locus_tag=O5C65_004219;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=HJH9174248.1;transl_table=11 DALFDA020000033.1 tpg gene 43752 44612 . + . ID=gene-O5C65_004220;Name=O5C65_004220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004220 DALFDA020000033.1 Protein Homology CDS 43752 44612 . + 0 ID=cds-HJH9174249.1;Parent=gene-O5C65_004220;Dbxref=NCBI_GP:HJH9174249.1;Name=HJH9174249.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462668.3;locus_tag=O5C65_004220;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=HJH9174249.1;transl_table=11 DALFDA020000033.1 tpg gene 44616 45725 . + . ID=gene-O5C65_004221;Name=dgaE;gbkey=Gene;gene=dgaE;gene_biotype=protein_coding;locus_tag=O5C65_004221 DALFDA020000033.1 Protein Homology CDS 44616 45725 . + 0 ID=cds-HJH9174250.1;Parent=gene-O5C65_004221;Dbxref=NCBI_GP:HJH9174250.1;Name=HJH9174250.1;Ontology_term=GO:0016829;gbkey=CDS;gene=dgaE;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462667.1;locus_tag=O5C65_004221;product=D-glucosaminate-6-phosphate ammonia lyase;protein_id=HJH9174250.1;transl_table=11 DALFDA020000033.1 tpg gene 45712 46455 . + . ID=gene-O5C65_004222;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=O5C65_004222 DALFDA020000033.1 Protein Homology CDS 45712 46455 . + 0 ID=cds-HJH9174251.1;Parent=gene-O5C65_004222;Dbxref=NCBI_GP:HJH9174251.1;Name=HJH9174251.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462666.1;locus_tag=O5C65_004222;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=HJH9174251.1;transl_table=11 DALFDA020000033.1 tpg gene 46691 47620 . + . ID=gene-O5C65_004223;Name=O5C65_004223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004223 DALFDA020000033.1 Protein Homology CDS 46691 47620 . + 0 ID=cds-HJH9174252.1;Parent=gene-O5C65_004223;Dbxref=NCBI_GP:HJH9174252.1;Name=HJH9174252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462665.1;locus_tag=O5C65_004223;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=HJH9174252.1;transl_table=11 DALFDA020000033.1 tpg gene 47663 48565 . - . ID=gene-O5C65_004224;Name=O5C65_004224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004224 DALFDA020000033.1 Protein Homology CDS 47663 48565 . - 0 ID=cds-HJH9174253.1;Parent=gene-O5C65_004224;Dbxref=NCBI_GP:HJH9174253.1;Name=HJH9174253.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462664.1;locus_tag=O5C65_004224;product=EamA family transporter;protein_id=HJH9174253.1;transl_table=11 DALFDA020000033.1 tpg gene 49071 49766 . + . ID=gene-O5C65_004225;Name=O5C65_004225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004225 DALFDA020000033.1 Protein Homology CDS 49071 49766 . + 0 ID=cds-HJH9174254.1;Parent=gene-O5C65_004225;Dbxref=NCBI_GP:HJH9174254.1;Name=HJH9174254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462663.1;locus_tag=O5C65_004225;product=MgtC family protein;protein_id=HJH9174254.1;transl_table=11 DALFDA020000033.1 tpg gene 49984 52710 . + . ID=gene-O5C65_004226;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=O5C65_004226 DALFDA020000033.1 Protein Homology CDS 49984 52710 . + 0 ID=cds-HJH9174255.1;Parent=gene-O5C65_004226;Dbxref=NCBI_GP:HJH9174255.1;Name=HJH9174255.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462662.1;locus_tag=O5C65_004226;product=magnesium-translocating P-type ATPase;protein_id=HJH9174255.1;transl_table=11 DALFDA020000033.1 tpg gene 52732 52824 . + . ID=gene-O5C65_004227;Name=mgtR;gbkey=Gene;gene=mgtR;gene_biotype=protein_coding;locus_tag=O5C65_004227 DALFDA020000033.1 Protein Homology CDS 52732 52824 . + 0 ID=cds-HJH9174256.1;Parent=gene-O5C65_004227;Dbxref=NCBI_GP:HJH9174256.1;Name=HJH9174256.1;gbkey=CDS;gene=mgtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082117.1;locus_tag=O5C65_004227;product=protein MgtR;protein_id=HJH9174256.1;transl_table=11 DALFDA020000033.1 tpg gene 52837 52923 . + . ID=gene-O5C65_004228;Name=mgtU;gbkey=Gene;gene=mgtU;gene_biotype=protein_coding;locus_tag=O5C65_004228 DALFDA020000033.1 Protein Homology CDS 52837 52923 . + 0 ID=cds-HJH9174257.1;Parent=gene-O5C65_004228;Dbxref=NCBI_GP:HJH9174257.1;Name=HJH9174257.1;gbkey=CDS;gene=mgtU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_251009859.1;locus_tag=O5C65_004228;product=magnesium transporter protection protein MgtU;protein_id=HJH9174257.1;transl_table=11 DALFDA020000033.1 tpg gene 53025 53504 . + . ID=gene-O5C65_004229;Name=cigR;gbkey=Gene;gene=cigR;gene_biotype=protein_coding;locus_tag=O5C65_004229 DALFDA020000033.1 Protein Homology CDS 53025 53504 . + 0 ID=cds-HJH9174258.1;Parent=gene-O5C65_004229;Dbxref=NCBI_GP:HJH9174258.1;Name=HJH9174258.1;gbkey=CDS;gene=cigR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462661.1;locus_tag=O5C65_004229;product=anti-virulence regulatory inner membrane protein CigR;protein_id=HJH9174258.1;transl_table=11 ##sequence-region DALFDA020000034.1 1 45343 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000034.1 tpg region 1 45343 . + . ID=DALFDA020000034.1:1..45343;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000034.1 tpg gene 1 1151 . - . ID=gene-O5C65_004230;Name=O5C65_004230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004230;partial=true;start_range=.,1 DALFDA020000034.1 Protein Homology CDS 1 1151 . - 0 ID=cds-HJH9174259.1;Parent=gene-O5C65_004230;Dbxref=NCBI_GP:HJH9174259.1;Name=HJH9174259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461184.1;locus_tag=O5C65_004230;partial=true;product=leucine-rich repeat domain-containing protein;protein_id=HJH9174259.1;start_range=.,1;transl_table=11 DALFDA020000034.1 tpg pseudogene 1411 1629 . + . ID=gene-O5C65_004231;Name=O5C65_004231;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004231;pseudo=true DALFDA020000034.1 Protein Homology CDS 1411 1629 . + 0 ID=cds-O5C65_004231;Parent=gene-O5C65_004231;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505044.1;locus_tag=O5C65_004231;product=tail fiber assembly protein;pseudo=true;transl_table=11 DALFDA020000034.1 tpg pseudogene 1708 1818 . - . ID=gene-O5C65_004232;Name=O5C65_004232;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004232;pseudo=true DALFDA020000034.1 Protein Homology CDS 1708 1818 . - 0 ID=cds-O5C65_004232;Parent=gene-O5C65_004232;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460062.1;locus_tag=O5C65_004232;product=hypothetical protein;pseudo=true;transl_table=11 DALFDA020000034.1 tpg gene 1854 1955 . + . ID=gene-O5C65_004233;Name=O5C65_004233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004233 DALFDA020000034.1 Protein Homology CDS 1854 1955 . + 0 ID=cds-HJH9174260.1;Parent=gene-O5C65_004233;Dbxref=NCBI_GP:HJH9174260.1;Name=HJH9174260.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026627.6;locus_tag=O5C65_004233;product=PagK family vesicle-borne virulence factor;protein_id=HJH9174260.1;transl_table=11 DALFDA020000034.1 tpg gene 2266 2784 . - . ID=gene-O5C65_004234;Name=O5C65_004234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004234 DALFDA020000034.1 Protein Homology CDS 2266 2784 . - 0 ID=cds-HJH9174261.1;Parent=gene-O5C65_004234;Dbxref=NCBI_GP:HJH9174261.1;Name=HJH9174261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421109.1;locus_tag=O5C65_004234;product=tail fiber assembly protein;protein_id=HJH9174261.1;transl_table=11 DALFDA020000034.1 tpg pseudogene 2799 5477 . - . ID=gene-O5C65_004235;Name=O5C65_004235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004235;pseudo=true DALFDA020000034.1 Protein Homology CDS 2799 5477 . - 0 ID=cds-O5C65_004235;Parent=gene-O5C65_004235;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264264.1;locus_tag=O5C65_004235;product=prophage tail fiber N-terminal domain-containing protein;pseudo=true;transl_table=11 DALFDA020000034.1 tpg gene 5531 5773 . - . ID=gene-O5C65_004236;Name=O5C65_004236;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004236 DALFDA020000034.1 Protein Homology CDS 5531 5773 . - 0 ID=cds-HJH9174262.1;Parent=gene-O5C65_004236;Dbxref=NCBI_GP:HJH9174262.1;Name=HJH9174262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178849.1;locus_tag=O5C65_004236;product=hypothetical protein;protein_id=HJH9174262.1;transl_table=11 DALFDA020000034.1 tpg gene 5812 6687 . - . ID=gene-O5C65_004237;Name=O5C65_004237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004237 DALFDA020000034.1 Protein Homology CDS 5812 6687 . - 0 ID=cds-HJH9174263.1;Parent=gene-O5C65_004237;Dbxref=NCBI_GP:HJH9174263.1;Name=HJH9174263.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020885.6;locus_tag=O5C65_004237;product=phage tail tip fiber protein;protein_id=HJH9174263.1;transl_table=11 DALFDA020000034.1 tpg pseudogene 6714 9162 . - . ID=gene-O5C65_004238;Name=O5C65_004238;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004238;pseudo=true DALFDA020000034.1 Protein Homology CDS 6714 9162 . - 0 ID=cds-O5C65_004238;Parent=gene-O5C65_004238;Note=frameshifted;Ontology_term=GO:0019062,GO:0046813,GO:0098003,GO:0098015;gbkey=CDS;go_component=virus tail|0098015||IEA;go_process=virion attachment to host cell|0019062||IEA,receptor-mediated virion attachment to host cell|0046813||IEA,viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460023.1;locus_tag=O5C65_004238;product=host specificity protein J;pseudo=true;transl_table=11 DALFDA020000034.1 tpg gene 9234 9938 . - . ID=gene-O5C65_004239;Name=O5C65_004239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004239 DALFDA020000034.1 Protein Homology CDS 9234 9938 . - 0 ID=cds-HJH9174264.1;Parent=gene-O5C65_004239;Dbxref=NCBI_GP:HJH9174264.1;Name=HJH9174264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460022.1;locus_tag=O5C65_004239;product=tail assembly protein;protein_id=HJH9174264.1;transl_table=11 DALFDA020000034.1 tpg gene 9836 10573 . - . ID=gene-O5C65_004240;Name=O5C65_004240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004240 DALFDA020000034.1 Protein Homology CDS 9836 10573 . - 0 ID=cds-HJH9174265.1;Parent=gene-O5C65_004240;Dbxref=NCBI_GP:HJH9174265.1;Name=HJH9174265.1;Ontology_term=GO:0006508,GO:0008234,GO:0008235,GO:0008270;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA,metalloexopeptidase activity|0008235||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460021.1;locus_tag=O5C65_004240;product=C40 family peptidase;protein_id=HJH9174265.1;transl_table=11 DALFDA020000034.1 tpg gene 10583 11278 . - . ID=gene-O5C65_004241;Name=O5C65_004241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004241 DALFDA020000034.1 Protein Homology CDS 10583 11278 . - 0 ID=cds-HJH9174266.1;Parent=gene-O5C65_004241;Dbxref=NCBI_GP:HJH9174266.1;Name=HJH9174266.1;Ontology_term=GO:0046718,GO:0051536,GO:0030430;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460020.1;locus_tag=O5C65_004241;product=phage minor tail protein L;protein_id=HJH9174266.1;transl_table=11 DALFDA020000034.1 tpg gene 11368 11901 . + . ID=gene-O5C65_004242;Name=sodC1;gbkey=Gene;gene=sodC1;gene_biotype=protein_coding;gene_synonym=sodCI;locus_tag=O5C65_004242 DALFDA020000034.1 Protein Homology CDS 11368 11901 . + 0 ID=cds-HJH9174267.1;Parent=gene-O5C65_004242;Dbxref=NCBI_GP:HJH9174267.1;Name=HJH9174267.1;gbkey=CDS;gene=sodC1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460019.1;locus_tag=O5C65_004242;product=superoxide dismutase [Cu-Zn] SodC1;protein_id=HJH9174267.1;transl_table=11 DALFDA020000034.1 tpg gene 12018 12515 . - . ID=gene-O5C65_004243;Name=O5C65_004243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004243 DALFDA020000034.1 Protein Homology CDS 12018 12515 . - 0 ID=cds-HJH9174268.1;Parent=gene-O5C65_004243;Dbxref=NCBI_GP:HJH9174268.1;Name=HJH9174268.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410972.1;locus_tag=O5C65_004243;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=HJH9174268.1;transl_table=11 DALFDA020000034.1 tpg gene 12614 12946 . - . ID=gene-O5C65_004244;Name=O5C65_004244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004244 DALFDA020000034.1 Protein Homology CDS 12614 12946 . - 0 ID=cds-HJH9174269.1;Parent=gene-O5C65_004244;Dbxref=NCBI_GP:HJH9174269.1;Name=HJH9174269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460017.1;locus_tag=O5C65_004244;product=phage tail protein;protein_id=HJH9174269.1;transl_table=11 DALFDA020000034.1 tpg pseudogene 12943 13482 . - . ID=gene-O5C65_004245;Name=O5C65_004245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004245;pseudo=true DALFDA020000034.1 Protein Homology CDS 12943 13482 . - 0 ID=cds-O5C65_004245;Parent=gene-O5C65_004245;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460016.1;locus_tag=O5C65_004245;product=phage tail tape measure protein;pseudo=true;transl_table=11 DALFDA020000034.1 tpg pseudogene 13477 13638 . - . ID=gene-O5C65_004246;Name=O5C65_004246;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004246;pseudo=true DALFDA020000034.1 Protein Homology CDS 13477 13638 . - 0 ID=cds-O5C65_004246;Parent=gene-O5C65_004246;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461552.1;locus_tag=O5C65_004246;product=bacteriophage antitermination protein Q;pseudo=true;transl_table=11 DALFDA020000034.1 tpg gene 13635 13718 . - . ID=gene-O5C65_004247;Name=O5C65_004247;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004247 DALFDA020000034.1 Protein Homology CDS 13635 13718 . - 0 ID=cds-HJH9174270.1;Parent=gene-O5C65_004247;Dbxref=NCBI_GP:HJH9174270.1;Name=HJH9174270.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033498.1;locus_tag=O5C65_004247;product=YlcG family protein;protein_id=HJH9174270.1;transl_table=11 DALFDA020000034.1 tpg pseudogene 13768 13920 . - . ID=gene-O5C65_004248;Name=O5C65_004248;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004248;pseudo=true DALFDA020000034.1 Protein Homology CDS 13768 13920 . - 0 ID=cds-O5C65_004248;Parent=gene-O5C65_004248;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459996.1;locus_tag=O5C65_004248;product=recombination protein NinG;pseudo=true;transl_table=11 DALFDA020000034.1 tpg gene 13992 14591 . - . ID=gene-O5C65_004249;Name=O5C65_004249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004249 DALFDA020000034.1 Protein Homology CDS 13992 14591 . - 0 ID=cds-HJH9174271.1;Parent=gene-O5C65_004249;Dbxref=NCBI_GP:HJH9174271.1;Name=HJH9174271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707250.1;locus_tag=O5C65_004249;product=DUF1367 family protein;protein_id=HJH9174271.1;transl_table=11 DALFDA020000034.1 tpg pseudogene 14655 14904 . - . ID=gene-O5C65_004250;Name=O5C65_004250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004250;pseudo=true DALFDA020000034.1 Protein Homology CDS 14655 14904 . - 0 ID=cds-O5C65_004250;Parent=gene-O5C65_004250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000911590.1;locus_tag=O5C65_004250;product=hypothetical protein;pseudo=true;transl_table=11 DALFDA020000034.1 tpg gene 15155 15310 . - . ID=gene-O5C65_004251;Name=O5C65_004251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004251 DALFDA020000034.1 Protein Homology CDS 15155 15310 . - 0 ID=cds-HJH9174272.1;Parent=gene-O5C65_004251;Dbxref=NCBI_GP:HJH9174272.1;Name=HJH9174272.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416080.1;locus_tag=O5C65_004251;product=Hok/Gef family protein;protein_id=HJH9174272.1;transl_table=11 DALFDA020000034.1 tpg gene 15514 15786 . - . ID=gene-O5C65_004252;Name=O5C65_004252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004252 DALFDA020000034.1 Protein Homology CDS 15514 15786 . - 0 ID=cds-HJH9174273.1;Parent=gene-O5C65_004252;Dbxref=NCBI_GP:HJH9174273.1;Name=HJH9174273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000687974.1;locus_tag=O5C65_004252;product=hypothetical protein;protein_id=HJH9174273.1;transl_table=11 DALFDA020000034.1 tpg gene 15783 16178 . - . ID=gene-O5C65_004253;Name=O5C65_004253;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004253 DALFDA020000034.1 Protein Homology CDS 15783 16178 . - 0 ID=cds-HJH9174274.1;Parent=gene-O5C65_004253;Dbxref=NCBI_GP:HJH9174274.1;Name=HJH9174274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089414.1;locus_tag=O5C65_004253;product=DUF977 family protein;protein_id=HJH9174274.1;transl_table=11 DALFDA020000034.1 tpg gene 16192 16734 . - . ID=gene-O5C65_004254;Name=O5C65_004254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004254 DALFDA020000034.1 Protein Homology CDS 16192 16734 . - 0 ID=cds-HJH9174275.1;Parent=gene-O5C65_004254;Dbxref=NCBI_GP:HJH9174275.1;Name=HJH9174275.1;Ontology_term=GO:0006270;gbkey=CDS;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001307798.1;locus_tag=O5C65_004254;product=replication protein P;protein_id=HJH9174275.1;transl_table=11 DALFDA020000034.1 tpg gene 16646 17653 . - . ID=gene-O5C65_004255;Name=O5C65_004255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004255 DALFDA020000034.1 Protein Homology CDS 16646 17653 . - 0 ID=cds-HJH9174276.1;Parent=gene-O5C65_004255;Dbxref=NCBI_GP:HJH9174276.1;Name=HJH9174276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729543.1;locus_tag=O5C65_004255;product=DUF1376 domain-containing protein;protein_id=HJH9174276.1;transl_table=11 DALFDA020000034.1 tpg gene 17700 18194 . - . ID=gene-O5C65_004256;Name=O5C65_004256;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004256 DALFDA020000034.1 Protein Homology CDS 17700 18194 . - 0 ID=cds-HJH9174277.1;Parent=gene-O5C65_004256;Dbxref=NCBI_GP:HJH9174277.1;Name=HJH9174277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533160.1;locus_tag=O5C65_004256;product=hypothetical protein;protein_id=HJH9174277.1;transl_table=11 DALFDA020000034.1 tpg gene 18181 18435 . - . ID=gene-O5C65_004257;Name=O5C65_004257;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004257 DALFDA020000034.1 Protein Homology CDS 18181 18435 . - 0 ID=cds-HJH9174278.1;Parent=gene-O5C65_004257;Dbxref=NCBI_GP:HJH9174278.1;Name=HJH9174278.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF013540.6;locus_tag=O5C65_004257;product=helix-turn-helix domain-containing protein;protein_id=HJH9174278.1;transl_table=11 DALFDA020000034.1 tpg gene 18532 18957 . + . ID=gene-O5C65_004258;Name=O5C65_004258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004258 DALFDA020000034.1 Protein Homology CDS 18532 18957 . + 0 ID=cds-HJH9174279.1;Parent=gene-O5C65_004258;Dbxref=NCBI_GP:HJH9174279.1;Name=HJH9174279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001224472.1;locus_tag=O5C65_004258;product=helix-turn-helix domain-containing protein;protein_id=HJH9174279.1;transl_table=11 DALFDA020000034.1 tpg gene 19412 19726 . - . ID=gene-O5C65_004259;Name=O5C65_004259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004259 DALFDA020000034.1 Protein Homology CDS 19412 19726 . - 0 ID=cds-HJH9174280.1;Parent=gene-O5C65_004259;Dbxref=NCBI_GP:HJH9174280.1;Name=HJH9174280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000188912.1;locus_tag=O5C65_004259;product=hypothetical protein;protein_id=HJH9174280.1;transl_table=11 DALFDA020000034.1 tpg gene 19988 20263 . + . ID=gene-O5C65_004260;Name=O5C65_004260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004260 DALFDA020000034.1 Protein Homology CDS 19988 20263 . + 0 ID=cds-HJH9174281.1;Parent=gene-O5C65_004260;Dbxref=NCBI_GP:HJH9174281.1;Name=HJH9174281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000103933.1;locus_tag=O5C65_004260;product=hypothetical protein;protein_id=HJH9174281.1;transl_table=11 DALFDA020000034.1 tpg gene 20267 20473 . + . ID=gene-O5C65_004261;Name=O5C65_004261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004261 DALFDA020000034.1 Protein Homology CDS 20267 20473 . + 0 ID=cds-HJH9174282.1;Parent=gene-O5C65_004261;Dbxref=NCBI_GP:HJH9174282.1;Name=HJH9174282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000682660.1;locus_tag=O5C65_004261;product=cell division inhibitor protein;protein_id=HJH9174282.1;transl_table=11 DALFDA020000034.1 tpg gene 20549 20884 . + . ID=gene-O5C65_004262;Name=O5C65_004262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004262 DALFDA020000034.1 Protein Homology CDS 20549 20884 . + 0 ID=cds-HJH9174283.1;Parent=gene-O5C65_004262;Dbxref=NCBI_GP:HJH9174283.1;Name=HJH9174283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000799630.1;locus_tag=O5C65_004262;product=hypothetical protein;protein_id=HJH9174283.1;transl_table=11 DALFDA020000034.1 tpg gene 21025 23715 . + . ID=gene-O5C65_004263;Name=recE;gbkey=Gene;gene=recE;gene_biotype=protein_coding;locus_tag=O5C65_004263 DALFDA020000034.1 Protein Homology CDS 21025 23715 . + 0 ID=cds-HJH9174284.1;Parent=gene-O5C65_004263;Dbxref=NCBI_GP:HJH9174284.1;Name=HJH9174284.1;Ontology_term=GO:0090304,GO:0051908;gbkey=CDS;gene=recE;go_function=double-stranded DNA 5'-3' DNA exonuclease activity|0051908||IEA;go_process=nucleic acid metabolic process|0090304||IEA;inference=COORDINATES: protein motif:HMM:NF007259.0;locus_tag=O5C65_004263;product=exodeoxyribonuclease VIII;protein_id=HJH9174284.1;transl_table=11 DALFDA020000034.1 tpg gene 23708 24538 . + . ID=gene-O5C65_004264;Name=recT;gbkey=Gene;gene=recT;gene_biotype=protein_coding;locus_tag=O5C65_004264 DALFDA020000034.1 Protein Homology CDS 23708 24538 . + 0 ID=cds-HJH9174285.1;Parent=gene-O5C65_004264;Dbxref=NCBI_GP:HJH9174285.1;Name=HJH9174285.1;Ontology_term=GO:0006259,GO:0003677;gbkey=CDS;gene=recT;go_function=DNA binding|0003677||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001126028.1;locus_tag=O5C65_004264;product=recombination protein RecT;protein_id=HJH9174285.1;transl_table=11 DALFDA020000034.1 tpg gene 24634 24894 . + . ID=gene-O5C65_004265;Name=O5C65_004265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004265 DALFDA020000034.1 Protein Homology CDS 24634 24894 . + 0 ID=cds-HJH9174286.1;Parent=gene-O5C65_004265;Dbxref=NCBI_GP:HJH9174286.1;Name=HJH9174286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033921.1;locus_tag=O5C65_004265;product=hypothetical protein;protein_id=HJH9174286.1;transl_table=11 DALFDA020000034.1 tpg gene 24887 25219 . + . ID=gene-O5C65_004266;Name=O5C65_004266;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004266 DALFDA020000034.1 Protein Homology CDS 24887 25219 . + 0 ID=cds-HJH9174287.1;Parent=gene-O5C65_004266;Dbxref=NCBI_GP:HJH9174287.1;Name=HJH9174287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066251.1;locus_tag=O5C65_004266;product=hypothetical protein;protein_id=HJH9174287.1;transl_table=11 DALFDA020000034.1 tpg gene 25216 25719 . + . ID=gene-O5C65_004267;Name=O5C65_004267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004267 DALFDA020000034.1 Protein Homology CDS 25216 25719 . + 0 ID=cds-HJH9174288.1;Parent=gene-O5C65_004267;Dbxref=NCBI_GP:HJH9174288.1;Name=HJH9174288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750632.1;locus_tag=O5C65_004267;product=Eaa protein;protein_id=HJH9174288.1;transl_table=11 DALFDA020000034.1 tpg gene 25769 26005 . + . ID=gene-O5C65_004268;Name=O5C65_004268;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004268 DALFDA020000034.1 Protein Homology CDS 25769 26005 . + 0 ID=cds-HJH9174289.1;Parent=gene-O5C65_004268;Dbxref=NCBI_GP:HJH9174289.1;Name=HJH9174289.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309637.1;locus_tag=O5C65_004268;product=excisionase;protein_id=HJH9174289.1;transl_table=11 DALFDA020000034.1 tpg gene 25995 27137 . + . ID=gene-O5C65_004269;Name=O5C65_004269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004269 DALFDA020000034.1 Protein Homology CDS 25995 27137 . + 0 ID=cds-HJH9174290.1;Parent=gene-O5C65_004269;Dbxref=NCBI_GP:HJH9174290.1;Name=HJH9174290.1;Ontology_term=GO:0015074,GO:0003677,GO:0008907;gbkey=CDS;go_function=DNA binding|0003677||IEA,integrase activity|0008907||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750633.1;locus_tag=O5C65_004269;product=phage integrase Arm DNA-binding domain-containing protein;protein_id=HJH9174290.1;transl_table=11 DALFDA020000034.1 tpg gene 27239 28489 . - . ID=gene-O5C65_004270;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=O5C65_004270 DALFDA020000034.1 Protein Homology CDS 27239 28489 . - 0 ID=cds-HJH9174291.1;Parent=gene-O5C65_004270;Dbxref=NCBI_GP:HJH9174291.1;Name=HJH9174291.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=O5C65_004270;product=NADP-dependent isocitrate dehydrogenase;protein_id=HJH9174291.1;transl_table=11 DALFDA020000034.1 tpg gene 28661 29326 . + . ID=gene-O5C65_004271;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=O5C65_004271 DALFDA020000034.1 Protein Homology CDS 28661 29326 . + 0 ID=cds-HJH9174292.1;Parent=gene-O5C65_004271;Dbxref=NCBI_GP:HJH9174292.1;Name=HJH9174292.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460207.1;locus_tag=O5C65_004271;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=HJH9174292.1;transl_table=11 DALFDA020000034.1 tpg gene 29323 29652 . + . ID=gene-O5C65_004272;Name=O5C65_004272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004272 DALFDA020000034.1 Protein Homology CDS 29323 29652 . + 0 ID=cds-HJH9174293.1;Parent=gene-O5C65_004272;Dbxref=NCBI_GP:HJH9174293.1;Name=HJH9174293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460206.1;locus_tag=O5C65_004272;product=lysozyme inhibitor LprI family protein;protein_id=HJH9174293.1;transl_table=11 DALFDA020000034.1 tpg gene 29664 30125 . + . ID=gene-O5C65_004273;Name=O5C65_004273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004273 DALFDA020000034.1 Protein Homology CDS 29664 30125 . + 0 ID=cds-HJH9174294.1;Parent=gene-O5C65_004273;Dbxref=NCBI_GP:HJH9174294.1;Name=HJH9174294.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460205.1;locus_tag=O5C65_004273;product=NUDIX hydrolase;protein_id=HJH9174294.1;transl_table=11 DALFDA020000034.1 tpg gene 30179 31285 . + . ID=gene-O5C65_004274;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=O5C65_004274 DALFDA020000034.1 Protein Homology CDS 30179 31285 . + 0 ID=cds-HJH9174295.1;Parent=gene-O5C65_004274;Dbxref=NCBI_GP:HJH9174295.1;Name=HJH9174295.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309632.2;locus_tag=O5C65_004274;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=HJH9174295.1;transl_table=11 DALFDA020000034.1 tpg gene 31372 32013 . + . ID=gene-O5C65_004275;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=O5C65_004275 DALFDA020000034.1 Protein Homology CDS 31372 32013 . + 0 ID=cds-HJH9174296.1;Parent=gene-O5C65_004275;Dbxref=NCBI_GP:HJH9174296.1;Name=HJH9174296.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=O5C65_004275;product=high frequency lysogenization protein HflD;protein_id=HJH9174296.1;transl_table=11 DALFDA020000034.1 tpg gene 32017 33387 . + . ID=gene-O5C65_004276;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=O5C65_004276 DALFDA020000034.1 Protein Homology CDS 32017 33387 . + 0 ID=cds-HJH9174297.1;Parent=gene-O5C65_004276;Dbxref=NCBI_GP:HJH9174297.1;Name=HJH9174297.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=O5C65_004276;product=adenylosuccinate lyase;protein_id=HJH9174297.1;transl_table=11 DALFDA020000034.1 tpg gene 33514 34185 . + . ID=gene-O5C65_004277;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=O5C65_004277 DALFDA020000034.1 Protein Homology CDS 33514 34185 . + 0 ID=cds-HJH9174298.1;Parent=gene-O5C65_004277;Dbxref=NCBI_GP:HJH9174298.1;Name=HJH9174298.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707059.1;locus_tag=O5C65_004277;product=two-component system response regulator PhoP;protein_id=HJH9174298.1;transl_table=11 DALFDA020000034.1 tpg gene 34185 35648 . + . ID=gene-O5C65_004278;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=O5C65_004278 DALFDA020000034.1 Protein Homology CDS 34185 35648 . + 0 ID=cds-HJH9174299.1;Parent=gene-O5C65_004278;Dbxref=NCBI_GP:HJH9174299.1;Name=HJH9174299.1;gbkey=CDS;gene=phoQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460200.1;locus_tag=O5C65_004278;product=two-component system sensor histidine kinase PhoQ;protein_id=HJH9174299.1;transl_table=11 DALFDA020000034.1 tpg gene 35729 36850 . + . ID=gene-O5C65_004279;Name=roxA;gbkey=Gene;gene=roxA;gene_biotype=protein_coding;gene_synonym=ycfD;locus_tag=O5C65_004279 DALFDA020000034.1 Protein Homology CDS 35729 36850 . + 0 ID=cds-HJH9174300.1;Parent=gene-O5C65_004279;Dbxref=NCBI_GP:HJH9174300.1;Name=HJH9174300.1;gbkey=CDS;gene=roxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460199.1;locus_tag=O5C65_004279;product=[50S ribosomal protein L16]-arginine 3-hydroxylase;protein_id=HJH9174300.1;transl_table=11 DALFDA020000034.1 tpg gene 36890 38224 . - . ID=gene-O5C65_004280;Name=O5C65_004280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004280 DALFDA020000034.1 Protein Homology CDS 36890 38224 . - 0 ID=cds-HJH9174301.1;Parent=gene-O5C65_004280;Dbxref=NCBI_GP:HJH9174301.1;Name=HJH9174301.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460198.1;locus_tag=O5C65_004280;product=tetratricopeptide repeat protein;protein_id=HJH9174301.1;transl_table=11 DALFDA020000034.1 tpg gene 38228 39457 . - . ID=gene-O5C65_004281;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=O5C65_004281 DALFDA020000034.1 Protein Homology CDS 38228 39457 . - 0 ID=cds-HJH9174302.1;Parent=gene-O5C65_004281;Dbxref=NCBI_GP:HJH9174302.1;Name=HJH9174302.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460197.1;locus_tag=O5C65_004281;product=peptidase T;protein_id=HJH9174302.1;transl_table=11 DALFDA020000034.1 tpg gene 39708 40844 . + . ID=gene-O5C65_004282;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=O5C65_004282 DALFDA020000034.1 Protein Homology CDS 39708 40844 . + 0 ID=cds-HJH9174303.1;Parent=gene-O5C65_004282;Dbxref=NCBI_GP:HJH9174303.1;Name=HJH9174303.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460196.1;locus_tag=O5C65_004282;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=HJH9174303.1;transl_table=11 DALFDA020000034.1 tpg gene 40828 41691 . + . ID=gene-O5C65_004283;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=O5C65_004283 DALFDA020000034.1 Protein Homology CDS 40828 41691 . + 0 ID=cds-HJH9174304.1;Parent=gene-O5C65_004283;Dbxref=NCBI_GP:HJH9174304.1;Name=HJH9174304.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460195.1;locus_tag=O5C65_004283;product=spermidine/putrescine ABC transporter permease PotB;protein_id=HJH9174304.1;transl_table=11 DALFDA020000034.1 tpg gene 42020 43030 . + . ID=gene-O5C65_004284;Name=sifA;gbkey=Gene;gene=sifA;gene_biotype=protein_coding;locus_tag=O5C65_004284 DALFDA020000034.1 Protein Homology CDS 42020 43030 . + 0 ID=cds-HJH9174305.1;Parent=gene-O5C65_004284;Dbxref=NCBI_GP:HJH9174305.1;Name=HJH9174305.1;gbkey=CDS;gene=sifA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460194.1;locus_tag=O5C65_004284;product=SPI-2 type III secretion system effector SifA;protein_id=HJH9174305.1;transl_table=11 DALFDA020000034.1 tpg gene 43346 44125 . + . ID=gene-O5C65_004285;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=O5C65_004285 DALFDA020000034.1 Protein Homology CDS 43346 44125 . + 0 ID=cds-HJH9174306.1;Parent=gene-O5C65_004285;Dbxref=NCBI_GP:HJH9174306.1;Name=HJH9174306.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460193.1;locus_tag=O5C65_004285;product=spermidine/putrescine ABC transporter permease PotC;protein_id=HJH9174306.1;transl_table=11 DALFDA020000034.1 tpg gene 44150 45196 . + . ID=gene-O5C65_004286;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=O5C65_004286 DALFDA020000034.1 Protein Homology CDS 44150 45196 . + 0 ID=cds-HJH9174307.1;Parent=gene-O5C65_004286;Dbxref=NCBI_GP:HJH9174307.1;Name=HJH9174307.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=O5C65_004286;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=HJH9174307.1;transl_table=11 DALFDA020000034.1 tpg gene 45278 45343 . - . ID=gene-O5C65_004287;Name=O5C65_004287;end_range=45343,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004287;partial=true DALFDA020000034.1 Protein Homology CDS 45278 45343 . - 0 ID=cds-HJH9174308.1;Parent=gene-O5C65_004287;Dbxref=NCBI_GP:HJH9174308.1;Name=HJH9174308.1;end_range=45343,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=O5C65_004287;partial=true;product=hypothetical protein;protein_id=HJH9174308.1;transl_table=11 ##sequence-region DALFDA020000035.1 1 45174 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000035.1 tpg region 1 45174 . + . ID=DALFDA020000035.1:1..45174;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000035.1 tpg gene 130 489 . - . ID=gene-O5C65_004288;Name=O5C65_004288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004288 DALFDA020000035.1 Protein Homology CDS 130 489 . - 0 ID=cds-HJH9174309.1;Parent=gene-O5C65_004288;Dbxref=NCBI_GP:HJH9174309.1;Name=HJH9174309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246999.1;locus_tag=O5C65_004288;product=hypothetical protein;protein_id=HJH9174309.1;transl_table=11 DALFDA020000035.1 tpg gene 482 658 . - . ID=gene-O5C65_004289;Name=O5C65_004289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004289 DALFDA020000035.1 Protein Homology CDS 482 658 . - 0 ID=cds-HJH9174310.1;Parent=gene-O5C65_004289;Dbxref=NCBI_GP:HJH9174310.1;Name=HJH9174310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120337.1;locus_tag=O5C65_004289;product=host cell division inhibitor Icd-like protein;protein_id=HJH9174310.1;transl_table=11 DALFDA020000035.1 tpg gene 789 962 . + . ID=gene-O5C65_004290;Name=O5C65_004290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004290 DALFDA020000035.1 Protein Homology CDS 789 962 . + 0 ID=cds-HJH9174311.1;Parent=gene-O5C65_004290;Dbxref=NCBI_GP:HJH9174311.1;Name=HJH9174311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001605077.1;locus_tag=O5C65_004290;product=hypothetical protein;protein_id=HJH9174311.1;transl_table=11 DALFDA020000035.1 tpg gene 1415 2239 . - . ID=gene-O5C65_004291;Name=O5C65_004291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004291 DALFDA020000035.1 Protein Homology CDS 1415 2239 . - 0 ID=cds-HJH9174312.1;Parent=gene-O5C65_004291;Dbxref=NCBI_GP:HJH9174312.1;Name=HJH9174312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101697.1;locus_tag=O5C65_004291;product=hypothetical protein;protein_id=HJH9174312.1;transl_table=11 DALFDA020000035.1 tpg gene 2236 3426 . - . ID=gene-O5C65_004292;Name=O5C65_004292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004292 DALFDA020000035.1 Protein Homology CDS 2236 3426 . - 0 ID=cds-HJH9174313.1;Parent=gene-O5C65_004292;Dbxref=NCBI_GP:HJH9174313.1;Name=HJH9174313.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979344.1;locus_tag=O5C65_004292;product=tyrosine-type recombinase/integrase;protein_id=HJH9174313.1;transl_table=11 DALFDA020000035.1 tpg gene 3591 3666 . - . ID=gene-O5C65_004293;Name=O5C65_004293;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_004293 DALFDA020000035.1 tRNAscan-SE tRNA 3591 3666 . - . ID=rna-O5C65_004293;Parent=gene-O5C65_004293;anticodon=(pos:complement(3631..3633));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004293;product=tRNA-Thr DALFDA020000035.1 tRNAscan-SE exon 3591 3666 . - . ID=exon-O5C65_004293-1;Parent=rna-O5C65_004293;anticodon=(pos:complement(3631..3633));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004293;product=tRNA-Thr DALFDA020000035.1 tpg gene 3782 5032 . - . ID=gene-O5C65_004294;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=O5C65_004294 DALFDA020000035.1 Protein Homology CDS 3782 5032 . - 0 ID=cds-HJH9174314.1;Parent=gene-O5C65_004294;Dbxref=NCBI_GP:HJH9174314.1;Name=HJH9174314.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459319.1;locus_tag=O5C65_004294;product=glutamate-5-semialdehyde dehydrogenase;protein_id=HJH9174314.1;transl_table=11 DALFDA020000035.1 tpg gene 5044 6147 . - . ID=gene-O5C65_004295;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=O5C65_004295 DALFDA020000035.1 Protein Homology CDS 5044 6147 . - 0 ID=cds-HJH9174315.1;Parent=gene-O5C65_004295;Dbxref=NCBI_GP:HJH9174315.1;Name=HJH9174315.1;Ontology_term=GO:0006561,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459318.1;locus_tag=O5C65_004295;product=glutamate 5-kinase;protein_id=HJH9174315.1;transl_table=11 DALFDA020000035.1 tpg gene 6430 7482 . + . ID=gene-O5C65_004296;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=O5C65_004296 DALFDA020000035.1 Protein Homology CDS 6430 7482 . + 0 ID=cds-HJH9174316.1;Parent=gene-O5C65_004296;Dbxref=NCBI_GP:HJH9174316.1;Name=HJH9174316.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459317.1;locus_tag=O5C65_004296;product=phosphoporin PhoE;protein_id=HJH9174316.1;transl_table=11 DALFDA020000035.1 tpg gene 7533 7934 . - . ID=gene-O5C65_004297;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=O5C65_004297 DALFDA020000035.1 Protein Homology CDS 7533 7934 . - 0 ID=cds-HJH9174317.1;Parent=gene-O5C65_004297;Dbxref=NCBI_GP:HJH9174317.1;Name=HJH9174317.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459316.1;locus_tag=O5C65_004297;product=sigma factor-binding protein Crl;protein_id=HJH9174317.1;transl_table=11 DALFDA020000035.1 tpg gene 7992 9236 . - . ID=gene-O5C65_004298;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=O5C65_004298 DALFDA020000035.1 Protein Homology CDS 7992 9236 . - 0 ID=cds-HJH9174318.1;Parent=gene-O5C65_004298;Dbxref=NCBI_GP:HJH9174318.1;Name=HJH9174318.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459315.1;locus_tag=O5C65_004298;product=esterase FrsA;protein_id=HJH9174318.1;transl_table=11 DALFDA020000035.1 tpg gene 9325 9783 . - . ID=gene-O5C65_004299;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=O5C65_004299 DALFDA020000035.1 Protein Homology CDS 9325 9783 . - 0 ID=cds-HJH9174319.1;Parent=gene-O5C65_004299;Dbxref=NCBI_GP:HJH9174319.1;Name=HJH9174319.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459314.1;locus_tag=O5C65_004299;product=xanthine phosphoribosyltransferase;protein_id=HJH9174319.1;transl_table=11 DALFDA020000035.1 tpg gene 10032 11489 . + . ID=gene-O5C65_004300;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=O5C65_004300 DALFDA020000035.1 Protein Homology CDS 10032 11489 . + 0 ID=cds-HJH9174320.1;Parent=gene-O5C65_004300;Dbxref=NCBI_GP:HJH9174320.1;Name=HJH9174320.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459313.1;locus_tag=O5C65_004300;product=cytosol nonspecific dipeptidase;protein_id=HJH9174320.1;transl_table=11 DALFDA020000035.1 tpg gene 11644 12258 . - . ID=gene-O5C65_004301;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=protein_coding;locus_tag=O5C65_004301 DALFDA020000035.1 Protein Homology CDS 11644 12258 . - 0 ID=cds-HJH9174321.1;Parent=gene-O5C65_004301;Dbxref=NCBI_GP:HJH9174321.1;Name=HJH9174321.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfH;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459312.1;locus_tag=O5C65_004301;product=peptide chain release factor H;protein_id=HJH9174321.1;transl_table=11 DALFDA020000035.1 tpg gene 12255 13394 . - . ID=gene-O5C65_004302;Name=O5C65_004302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004302 DALFDA020000035.1 Protein Homology CDS 12255 13394 . - 0 ID=cds-HJH9174322.1;Parent=gene-O5C65_004302;Dbxref=NCBI_GP:HJH9174322.1;Name=HJH9174322.1;Ontology_term=GO:0006415;gbkey=CDS;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006895405.1;locus_tag=O5C65_004302;product=RNA ligase RtcB family protein;protein_id=HJH9174322.1;transl_table=11 DALFDA020000035.1 tpg gene 13614 14669 . - . ID=gene-O5C65_004303;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=O5C65_004303 DALFDA020000035.1 Protein Homology CDS 13614 14669 . - 0 ID=cds-HJH9174323.1;Parent=gene-O5C65_004303;Dbxref=NCBI_GP:HJH9174323.1;Name=HJH9174323.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459311.1;locus_tag=O5C65_004303;product=DNA polymerase IV;protein_id=HJH9174323.1;transl_table=11 DALFDA020000035.1 tpg gene 14919 15659 . + . ID=gene-O5C65_004304;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=O5C65_004304 DALFDA020000035.1 Protein Homology CDS 14919 15659 . + 0 ID=cds-HJH9174324.1;Parent=gene-O5C65_004304;Dbxref=NCBI_GP:HJH9174324.1;Name=HJH9174324.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459310.1;locus_tag=O5C65_004304;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=HJH9174324.1;transl_table=11 DALFDA020000035.1 tpg gene 15630 16397 . - . ID=gene-O5C65_004305;Name=O5C65_004305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004305 DALFDA020000035.1 Protein Homology CDS 15630 16397 . - 0 ID=cds-HJH9174325.1;Parent=gene-O5C65_004305;Dbxref=NCBI_GP:HJH9174325.1;Name=HJH9174325.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459309.1;locus_tag=O5C65_004305;product=class II glutamine amidotransferase;protein_id=HJH9174325.1;transl_table=11 DALFDA020000035.1 tpg gene 16610 17188 . - . ID=gene-O5C65_004306;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=O5C65_004306 DALFDA020000035.1 Protein Homology CDS 16610 17188 . - 0 ID=cds-HJH9174326.1;Parent=gene-O5C65_004306;Dbxref=NCBI_GP:HJH9174326.1;Name=HJH9174326.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459308.1;locus_tag=O5C65_004306;product=D-sedoheptulose 7-phosphate isomerase;protein_id=HJH9174326.1;transl_table=11 DALFDA020000035.1 tpg gene 17428 19872 . + . ID=gene-O5C65_004307;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=O5C65_004307 DALFDA020000035.1 Protein Homology CDS 17428 19872 . + 0 ID=cds-HJH9174327.1;Parent=gene-O5C65_004307;Dbxref=NCBI_GP:HJH9174327.1;Name=HJH9174327.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459307.1;locus_tag=O5C65_004307;product=acyl-CoA dehydrogenase FadE;protein_id=HJH9174327.1;transl_table=11 DALFDA020000035.1 tpg gene 19981 20748 . + . ID=gene-O5C65_004308;Name=O5C65_004308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004308 DALFDA020000035.1 Protein Homology CDS 19981 20748 . + 0 ID=cds-HJH9174328.1;Parent=gene-O5C65_004308;Dbxref=NCBI_GP:HJH9174328.1;Name=HJH9174328.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459306.1;locus_tag=O5C65_004308;product=amidohydrolase;protein_id=HJH9174328.1;transl_table=11 DALFDA020000035.1 tpg gene 21058 21465 . + . ID=gene-O5C65_004309;Name=O5C65_004309;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004309 DALFDA020000035.1 Protein Homology CDS 21058 21465 . + 0 ID=cds-HJH9174329.1;Parent=gene-O5C65_004309;Dbxref=NCBI_GP:HJH9174329.1;Name=HJH9174329.1;Ontology_term=GO:0061077,GO:0044183,GO:0051082;gbkey=CDS;go_function=protein folding chaperone|0044183||IEA,unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459305.1;locus_tag=O5C65_004309;product=Spy/CpxP family protein refolding chaperone;protein_id=HJH9174329.1;transl_table=11 DALFDA020000035.1 tpg gene 21805 22524 . + . ID=gene-O5C65_004310;Name=pagN;gbkey=Gene;gene=pagN;gene_biotype=protein_coding;locus_tag=O5C65_004310 DALFDA020000035.1 Protein Homology CDS 21805 22524 . + 0 ID=cds-HJH9174330.1;Parent=gene-O5C65_004310;Dbxref=NCBI_GP:HJH9174330.1;Name=HJH9174330.1;gbkey=CDS;gene=pagN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459304.1;locus_tag=O5C65_004310;product=adhesin/invasin protein PagN;protein_id=HJH9174330.1;transl_table=11 DALFDA020000035.1 tpg gene 22528 22743 . - . ID=gene-O5C65_004311;Name=O5C65_004311;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004311 DALFDA020000035.1 Protein Homology CDS 22528 22743 . - 0 ID=cds-HJH9174331.1;Parent=gene-O5C65_004311;Dbxref=NCBI_GP:HJH9174331.1;Name=HJH9174331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459303.1;locus_tag=O5C65_004311;product=hypothetical protein;protein_id=HJH9174331.1;transl_table=11 DALFDA020000035.1 tpg gene 22863 23810 . - . ID=gene-O5C65_004312;Name=O5C65_004312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004312 DALFDA020000035.1 Protein Homology CDS 22863 23810 . - 0 ID=cds-HJH9174332.1;Parent=gene-O5C65_004312;Dbxref=NCBI_GP:HJH9174332.1;Name=HJH9174332.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459302.1;locus_tag=O5C65_004312;product=LysR family transcriptional regulator;protein_id=HJH9174332.1;transl_table=11 DALFDA020000035.1 tpg pseudogene 24307 24544 . - . ID=gene-O5C65_004313;Name=O5C65_004313;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004313;pseudo=true DALFDA020000035.1 Protein Homology CDS 24307 24544 . - 0 ID=cds-O5C65_004313;Parent=gene-O5C65_004313;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012602066.1;locus_tag=O5C65_004313;product=PerC family transcriptional regulator;pseudo=true;transl_table=11 DALFDA020000035.1 tpg gene 24627 25448 . - . ID=gene-O5C65_004314;Name=O5C65_004314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004314 DALFDA020000035.1 Protein Homology CDS 24627 25448 . - 0 ID=cds-HJH9174333.1;Parent=gene-O5C65_004314;Dbxref=NCBI_GP:HJH9174333.1;Name=HJH9174333.1;Ontology_term=GO:0005975,GO:0016787,GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459301.1;locus_tag=O5C65_004314;product=polysaccharide deacetylase family protein;protein_id=HJH9174333.1;transl_table=11 DALFDA020000035.1 tpg gene 25856 26326 . - . ID=gene-O5C65_004315;Name=afaD;gbkey=Gene;gene=afaD;gene_biotype=protein_coding;locus_tag=O5C65_004315 DALFDA020000035.1 Protein Homology CDS 25856 26326 . - 0 ID=cds-HJH9174334.1;Parent=gene-O5C65_004315;Dbxref=NCBI_GP:HJH9174334.1;Name=HJH9174334.1;gbkey=CDS;gene=afaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459300.1;locus_tag=O5C65_004315;product=AfaD family invasin;protein_id=HJH9174334.1;transl_table=11 DALFDA020000035.1 tpg gene 26348 28858 . - . ID=gene-O5C65_004316;Name=O5C65_004316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004316 DALFDA020000035.1 Protein Homology CDS 26348 28858 . - 0 ID=cds-HJH9174335.1;Parent=gene-O5C65_004316;Dbxref=NCBI_GP:HJH9174335.1;Name=HJH9174335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459299.1;locus_tag=O5C65_004316;product=fimbrial biogenesis outer membrane usher protein;protein_id=HJH9174335.1;transl_table=11 DALFDA020000035.1 tpg gene 28882 29622 . - . ID=gene-O5C65_004317;Name=safB;gbkey=Gene;gene=safB;gene_biotype=protein_coding;locus_tag=O5C65_004317 DALFDA020000035.1 Protein Homology CDS 28882 29622 . - 0 ID=cds-HJH9174336.1;Parent=gene-O5C65_004317;Dbxref=NCBI_GP:HJH9174336.1;Name=HJH9174336.1;gbkey=CDS;gene=safB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465813.1;locus_tag=O5C65_004317;product=pili assembly chaperone SafB;protein_id=HJH9174336.1;transl_table=11 DALFDA020000035.1 tpg gene 29697 30194 . - . ID=gene-O5C65_004318;Name=O5C65_004318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004318 DALFDA020000035.1 Protein Homology CDS 29697 30194 . - 0 ID=cds-HJH9174337.1;Parent=gene-O5C65_004318;Dbxref=NCBI_GP:HJH9174337.1;Name=HJH9174337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789648.1;locus_tag=O5C65_004318;product=Saf-pilin pilus formation protein SafA;protein_id=HJH9174337.1;transl_table=11 DALFDA020000035.1 tpg gene 30327 30821 . - . ID=gene-O5C65_004319;Name=O5C65_004319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004319 DALFDA020000035.1 Protein Homology CDS 30327 30821 . - 0 ID=cds-HJH9174338.1;Parent=gene-O5C65_004319;Dbxref=NCBI_GP:HJH9174338.1;Name=HJH9174338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789624.1;locus_tag=O5C65_004319;product=hypothetical protein;protein_id=HJH9174338.1;transl_table=11 DALFDA020000035.1 tpg pseudogene 31577 32150 . - . ID=gene-O5C65_004320;Name=O5C65_004320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004320;pseudo=true DALFDA020000035.1 Protein Homology CDS 31577 32150 . - 0 ID=cds-O5C65_004320;Parent=gene-O5C65_004320;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611501.1;locus_tag=O5C65_004320;product=integrase core domain-containing protein;pseudo=true;transl_table=11 DALFDA020000035.1 tpg gene 32084 32281 . - . ID=gene-O5C65_004321;Name=O5C65_004321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004321 DALFDA020000035.1 Protein Homology CDS 32084 32281 . - 0 ID=cds-HJH9174339.1;Parent=gene-O5C65_004321;Dbxref=NCBI_GP:HJH9174339.1;Name=HJH9174339.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.6;locus_tag=O5C65_004321;product=transposase;protein_id=HJH9174339.1;transl_table=11 DALFDA020000035.1 tpg gene 32334 32582 . + . ID=gene-O5C65_004322;Name=O5C65_004322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004322 DALFDA020000035.1 Protein Homology CDS 32334 32582 . + 0 ID=cds-HJH9174340.1;Parent=gene-O5C65_004322;Dbxref=NCBI_GP:HJH9174340.1;Name=HJH9174340.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_446753.1;locus_tag=O5C65_004322;product=SymE family type I addiction module toxin;protein_id=HJH9174340.1;transl_table=11 DALFDA020000035.1 tpg gene 32714 32992 . - . ID=gene-O5C65_004323;Name=O5C65_004323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004323 DALFDA020000035.1 Protein Homology CDS 32714 32992 . - 0 ID=cds-HJH9174341.1;Parent=gene-O5C65_004323;Dbxref=NCBI_GP:HJH9174341.1;Name=HJH9174341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459293.1;locus_tag=O5C65_004323;product=hypothetical protein;protein_id=HJH9174341.1;transl_table=11 DALFDA020000035.1 tpg pseudogene 33123 33280 . - . ID=gene-O5C65_004324;Name=O5C65_004324;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004324;pseudo=true DALFDA020000035.1 Protein Homology CDS 33123 33280 . - 0 ID=cds-O5C65_004324;Parent=gene-O5C65_004324;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238642.1;locus_tag=O5C65_004324;product=RHS repeat-associated core domain-containing protein;pseudo=true;transl_table=11 DALFDA020000035.1 tpg gene 33310 33777 . - . ID=gene-O5C65_004325;Name=O5C65_004325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004325 DALFDA020000035.1 Protein Homology CDS 33310 33777 . - 0 ID=cds-HJH9174342.1;Parent=gene-O5C65_004325;Dbxref=NCBI_GP:HJH9174342.1;Name=HJH9174342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828176.1;locus_tag=O5C65_004325;product=sugar tyrosine-protein kinase;protein_id=HJH9174342.1;transl_table=11 DALFDA020000035.1 tpg gene 34650 34883 . - . ID=gene-O5C65_004326;Name=O5C65_004326;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004326 DALFDA020000035.1 GeneMarkS-2+ CDS 34650 34883 . - 0 ID=cds-HJH9174343.1;Parent=gene-O5C65_004326;Dbxref=NCBI_GP:HJH9174343.1;Name=HJH9174343.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004326;product=hypothetical protein;protein_id=HJH9174343.1;transl_table=11 DALFDA020000035.1 tpg pseudogene 34908 35080 . - . ID=gene-O5C65_004327;Name=O5C65_004327;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004327;pseudo=true DALFDA020000035.1 Protein Homology CDS 34908 35080 . - 0 ID=cds-O5C65_004327;Parent=gene-O5C65_004327;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=O5C65_004327;product=RHS repeat-associated core domain-containing protein;pseudo=true;transl_table=11 DALFDA020000035.1 tpg gene 35217 35492 . + . ID=gene-O5C65_004328;Name=O5C65_004328;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004328 DALFDA020000035.1 Protein Homology CDS 35217 35492 . + 0 ID=cds-HJH9174344.1;Parent=gene-O5C65_004328;Dbxref=NCBI_GP:HJH9174344.1;Name=HJH9174344.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000994228.1;locus_tag=O5C65_004328;product=SymE family type I addiction module toxin;protein_id=HJH9174344.1;transl_table=11 DALFDA020000035.1 tpg gene 35540 35971 . - . ID=gene-O5C65_004329;Name=O5C65_004329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004329 DALFDA020000035.1 Protein Homology CDS 35540 35971 . - 0 ID=cds-HJH9174345.1;Parent=gene-O5C65_004329;Dbxref=NCBI_GP:HJH9174345.1;Name=HJH9174345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778606.1;locus_tag=O5C65_004329;product=hypothetical protein;protein_id=HJH9174345.1;transl_table=11 DALFDA020000035.1 tpg pseudogene 35973 38828 . - . ID=gene-O5C65_004330;Name=O5C65_004330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004330;pseudo=true DALFDA020000035.1 Protein Homology CDS 35973 38828 . - 0 ID=cds-O5C65_004330;Parent=gene-O5C65_004330;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000503215.1;locus_tag=O5C65_004330;product=RHS repeat-associated core domain-containing protein;pseudo=true;transl_table=11 DALFDA020000035.1 tpg gene 38819 39085 . + . ID=gene-O5C65_004331;Name=O5C65_004331;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004331 DALFDA020000035.1 Protein Homology CDS 38819 39085 . + 0 ID=cds-HJH9174346.1;Parent=gene-O5C65_004331;Dbxref=NCBI_GP:HJH9174346.1;Name=HJH9174346.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632802.1;locus_tag=O5C65_004331;product=SymE family type I addiction module toxin;protein_id=HJH9174346.1;transl_table=11 DALFDA020000035.1 tpg gene 39203 39541 . - . ID=gene-O5C65_004332;Name=O5C65_004332;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004332 DALFDA020000035.1 Protein Homology CDS 39203 39541 . - 0 ID=cds-HJH9174347.1;Parent=gene-O5C65_004332;Dbxref=NCBI_GP:HJH9174347.1;Name=HJH9174347.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049362.1;locus_tag=O5C65_004332;product=DUF7716 domain-containing protein;protein_id=HJH9174347.1;transl_table=11 DALFDA020000035.1 tpg gene 39563 43693 . - . ID=gene-O5C65_004333;Name=O5C65_004333;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004333 DALFDA020000035.1 Protein Homology CDS 39563 43693 . - 0 ID=cds-HJH9174348.1;Parent=gene-O5C65_004333;Dbxref=NCBI_GP:HJH9174348.1;Name=HJH9174348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272652.1;locus_tag=O5C65_004333;product=RHS repeat-associated core domain-containing protein;protein_id=HJH9174348.1;transl_table=11 DALFDA020000035.1 tpg gene 43712 44158 . - . ID=gene-O5C65_004334;Name=O5C65_004334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004334 DALFDA020000035.1 Protein Homology CDS 43712 44158 . - 0 ID=cds-HJH9174349.1;Parent=gene-O5C65_004334;Dbxref=NCBI_GP:HJH9174349.1;Name=HJH9174349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459288.1;locus_tag=O5C65_004334;product=DcrB-related protein;protein_id=HJH9174349.1;transl_table=11 DALFDA020000035.1 tpg gene 44182 45174 . - . ID=gene-O5C65_004335;Name=O5C65_004335;end_range=45174,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004335;partial=true DALFDA020000035.1 Protein Homology CDS 44182 45174 . - 0 ID=cds-HJH9174350.1;Parent=gene-O5C65_004335;Dbxref=NCBI_GP:HJH9174350.1;Name=HJH9174350.1;Ontology_term=GO:0033103,GO:0033104;end_range=45174,.;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459287.1;locus_tag=O5C65_004335;partial=true;product=type VI secretion system Vgr family protein;protein_id=HJH9174350.1;transl_table=11 ##sequence-region DALFDA020000036.1 1 44829 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000036.1 tpg region 1 44829 . + . ID=DALFDA020000036.1:1..44829;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000036.1 tpg gene 137 2710 . - . ID=gene-O5C65_004336;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=O5C65_004336 DALFDA020000036.1 Protein Homology CDS 137 2710 . - 0 ID=cds-HJH9174351.1;Parent=gene-O5C65_004336;Dbxref=NCBI_GP:HJH9174351.1;Name=HJH9174351.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=O5C65_004336;product=ATP-dependent chaperone ClpB;protein_id=HJH9174351.1;transl_table=11 DALFDA020000036.1 tpg gene 2840 3571 . - . ID=gene-O5C65_004337;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=O5C65_004337 DALFDA020000036.1 Protein Homology CDS 2840 3571 . - 0 ID=cds-HJH9174352.1;Parent=gene-O5C65_004337;Dbxref=NCBI_GP:HJH9174352.1;Name=HJH9174352.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461592.1;locus_tag=O5C65_004337;product=purine nucleoside phosphorylase YfiH;protein_id=HJH9174352.1;transl_table=11 DALFDA020000036.1 tpg gene 3568 4548 . - . ID=gene-O5C65_004338;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=O5C65_004338 DALFDA020000036.1 Protein Homology CDS 3568 4548 . - 0 ID=cds-HJH9174353.1;Parent=gene-O5C65_004338;Dbxref=NCBI_GP:HJH9174353.1;Name=HJH9174353.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=O5C65_004338;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=HJH9174353.1;transl_table=11 DALFDA020000036.1 tpg gene 4680 5417 . + . ID=gene-O5C65_004339;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=O5C65_004339 DALFDA020000036.1 Protein Homology CDS 4680 5417 . + 0 ID=cds-HJH9174354.1;Parent=gene-O5C65_004339;Dbxref=NCBI_GP:HJH9174354.1;Name=HJH9174354.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461594.1;locus_tag=O5C65_004339;product=outer membrane protein assembly factor BamD;protein_id=HJH9174354.1;transl_table=11 DALFDA020000036.1 tpg gene 5689 6027 . + . ID=gene-O5C65_004340;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=O5C65_004340 DALFDA020000036.1 Protein Homology CDS 5689 6027 . + 0 ID=cds-HJH9174355.1;Parent=gene-O5C65_004340;Dbxref=NCBI_GP:HJH9174355.1;Name=HJH9174355.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461595.1;locus_tag=O5C65_004340;product=ribosome-associated translation inhibitor RaiA;protein_id=HJH9174355.1;transl_table=11 DALFDA020000036.1 cmsearch sequence_feature 6130 6255 . + . ID=id-DALFDA020000036.1:6130..6255;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 DALFDA020000036.1 tpg gene 6131 6178 . + . ID=gene-O5C65_004341;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=O5C65_004341 DALFDA020000036.1 Protein Homology CDS 6131 6178 . + 0 ID=cds-HJH9174356.1;Parent=gene-O5C65_004341;Dbxref=NCBI_GP:HJH9174356.1;Name=HJH9174356.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449055.1;locus_tag=O5C65_004341;product=pheA operon leader peptide PheL;protein_id=HJH9174356.1;transl_table=11 DALFDA020000036.1 tpg gene 6278 7438 . + . ID=gene-O5C65_004342;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=O5C65_004342 DALFDA020000036.1 Protein Homology CDS 6278 7438 . + 0 ID=cds-HJH9174357.1;Parent=gene-O5C65_004342;Dbxref=NCBI_GP:HJH9174357.1;Name=HJH9174357.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461597.1;locus_tag=O5C65_004342;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=HJH9174357.1;transl_table=11 DALFDA020000036.1 tpg gene 7399 8307 . - . ID=gene-O5C65_004343;Name=O5C65_004343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004343 DALFDA020000036.1 Protein Homology CDS 7399 8307 . - 0 ID=cds-HJH9174358.1;Parent=gene-O5C65_004343;Dbxref=NCBI_GP:HJH9174358.1;Name=HJH9174358.1;Ontology_term=GO:0005509,GO:0016787,GO:0046872;gbkey=CDS;go_function=calcium ion binding|0005509||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461598.1;locus_tag=O5C65_004343;product=SMP-30/gluconolactonase/LRE family protein;protein_id=HJH9174358.1;transl_table=11 DALFDA020000036.1 tpg gene 8365 9486 . - . ID=gene-O5C65_004344;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=O5C65_004344 DALFDA020000036.1 Protein Homology CDS 8365 9486 . - 0 ID=cds-HJH9174359.1;Parent=gene-O5C65_004344;Dbxref=NCBI_GP:HJH9174359.1;Name=HJH9174359.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461599.1;locus_tag=O5C65_004344;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=HJH9174359.1;transl_table=11 DALFDA020000036.1 tpg gene 9496 10566 . - . ID=gene-O5C65_004345;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=O5C65_004345 DALFDA020000036.1 Protein Homology CDS 9496 10566 . - 0 ID=cds-HJH9174360.1;Parent=gene-O5C65_004345;Dbxref=NCBI_GP:HJH9174360.1;Name=HJH9174360.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461600.1;locus_tag=O5C65_004345;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=HJH9174360.1;transl_table=11 DALFDA020000036.1 tpg gene 11006 11524 . + . ID=gene-O5C65_004346;Name=O5C65_004346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004346 DALFDA020000036.1 Protein Homology CDS 11006 11524 . + 0 ID=cds-HJH9174361.1;Parent=gene-O5C65_004346;Dbxref=NCBI_GP:HJH9174361.1;Name=HJH9174361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461601.1;locus_tag=O5C65_004346;product=YfiR family protein;protein_id=HJH9174361.1;transl_table=11 DALFDA020000036.1 tpg gene 11517 12737 . + . ID=gene-O5C65_004347;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=O5C65_004347 DALFDA020000036.1 Protein Homology CDS 11517 12737 . + 0 ID=cds-HJH9174362.1;Parent=gene-O5C65_004347;Dbxref=NCBI_GP:HJH9174362.1;Name=HJH9174362.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461602.1;locus_tag=O5C65_004347;product=diguanylate cyclase DgcN;protein_id=HJH9174362.1;transl_table=11 DALFDA020000036.1 tpg gene 12894 13241 . - . ID=gene-O5C65_004348;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=O5C65_004348 DALFDA020000036.1 Protein Homology CDS 12894 13241 . - 0 ID=cds-HJH9174363.1;Parent=gene-O5C65_004348;Dbxref=NCBI_GP:HJH9174363.1;Name=HJH9174363.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=O5C65_004348;product=50S ribosomal protein L19;protein_id=HJH9174363.1;transl_table=11 DALFDA020000036.1 tpg gene 13282 14049 . - . ID=gene-O5C65_004349;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=O5C65_004349 DALFDA020000036.1 Protein Homology CDS 13282 14049 . - 0 ID=cds-HJH9174364.1;Parent=gene-O5C65_004349;Dbxref=NCBI_GP:HJH9174364.1;Name=HJH9174364.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461604.1;locus_tag=O5C65_004349;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=HJH9174364.1;transl_table=11 DALFDA020000036.1 tpg gene 14094 14642 . - . ID=gene-O5C65_004350;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=O5C65_004350 DALFDA020000036.1 Protein Homology CDS 14094 14642 . - 0 ID=cds-HJH9174365.1;Parent=gene-O5C65_004350;Dbxref=NCBI_GP:HJH9174365.1;Name=HJH9174365.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=O5C65_004350;product=ribosome maturation factor RimM;protein_id=HJH9174365.1;transl_table=11 DALFDA020000036.1 tpg gene 14661 14909 . - . ID=gene-O5C65_004351;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=O5C65_004351 DALFDA020000036.1 Protein Homology CDS 14661 14909 . - 0 ID=cds-HJH9174366.1;Parent=gene-O5C65_004351;Dbxref=NCBI_GP:HJH9174366.1;Name=HJH9174366.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=O5C65_004351;product=30S ribosomal protein S16;protein_id=HJH9174366.1;transl_table=11 DALFDA020000036.1 tpg gene 15223 16584 . - . ID=gene-O5C65_004352;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=O5C65_004352 DALFDA020000036.1 Protein Homology CDS 15223 16584 . - 0 ID=cds-HJH9174367.1;Parent=gene-O5C65_004352;Dbxref=NCBI_GP:HJH9174367.1;Name=HJH9174367.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=O5C65_004352;product=signal recognition particle protein;protein_id=HJH9174367.1;transl_table=11 DALFDA020000036.1 tpg gene 16750 17541 . + . ID=gene-O5C65_004353;Name=O5C65_004353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004353 DALFDA020000036.1 Protein Homology CDS 16750 17541 . + 0 ID=cds-HJH9174368.1;Parent=gene-O5C65_004353;Dbxref=NCBI_GP:HJH9174368.1;Name=HJH9174368.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461608.1;locus_tag=O5C65_004353;product=cytochrome C assembly family protein;protein_id=HJH9174368.1;transl_table=11 DALFDA020000036.1 tpg gene 17561 18847 . + . ID=gene-O5C65_004354;Name=O5C65_004354;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004354 DALFDA020000036.1 Protein Homology CDS 17561 18847 . + 0 ID=cds-HJH9174369.1;Parent=gene-O5C65_004354;Dbxref=NCBI_GP:HJH9174369.1;Name=HJH9174369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=O5C65_004354;product=HlyC/CorC family transporter;protein_id=HJH9174369.1;transl_table=11 DALFDA020000036.1 tpg gene 18968 19573 . + . ID=gene-O5C65_004355;Name=O5C65_004355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004355 DALFDA020000036.1 Protein Homology CDS 18968 19573 . + 0 ID=cds-HJH9174370.1;Parent=gene-O5C65_004355;Dbxref=NCBI_GP:HJH9174370.1;Name=HJH9174370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461610.1;locus_tag=O5C65_004355;product=DUF6630 family protein;protein_id=HJH9174370.1;transl_table=11 DALFDA020000036.1 tpg gene 19608 20198 . - . ID=gene-O5C65_004356;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=O5C65_004356 DALFDA020000036.1 Protein Homology CDS 19608 20198 . - 0 ID=cds-HJH9174371.1;Parent=gene-O5C65_004356;Dbxref=NCBI_GP:HJH9174371.1;Name=HJH9174371.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461611.1;locus_tag=O5C65_004356;product=nucleotide exchange factor GrpE;protein_id=HJH9174371.1;transl_table=11 DALFDA020000036.1 tpg gene 20321 21199 . + . ID=gene-O5C65_004357;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=O5C65_004357 DALFDA020000036.1 Protein Homology CDS 20321 21199 . + 0 ID=cds-HJH9174372.1;Parent=gene-O5C65_004357;Dbxref=NCBI_GP:HJH9174372.1;Name=HJH9174372.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=O5C65_004357;product=NAD(+) kinase;protein_id=HJH9174372.1;transl_table=11 DALFDA020000036.1 tpg gene 21285 22946 . + . ID=gene-O5C65_004358;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=O5C65_004358 DALFDA020000036.1 Protein Homology CDS 21285 22946 . + 0 ID=cds-HJH9174373.1;Parent=gene-O5C65_004358;Dbxref=NCBI_GP:HJH9174373.1;Name=HJH9174373.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461614.1;locus_tag=O5C65_004358;product=DNA repair protein RecN;protein_id=HJH9174373.1;transl_table=11 DALFDA020000036.1 tpg gene 23095 23433 . + . ID=gene-O5C65_004359;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=O5C65_004359 DALFDA020000036.1 Protein Homology CDS 23095 23433 . + 0 ID=cds-HJH9174374.1;Parent=gene-O5C65_004359;Dbxref=NCBI_GP:HJH9174374.1;Name=HJH9174374.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461615.1;locus_tag=O5C65_004359;product=outer membrane protein assembly factor BamE;protein_id=HJH9174374.1;transl_table=11 DALFDA020000036.1 tpg gene 23599 23889 . - . ID=gene-O5C65_004360;Name=O5C65_004360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004360 DALFDA020000036.1 Protein Homology CDS 23599 23889 . - 0 ID=cds-HJH9174375.1;Parent=gene-O5C65_004360;Dbxref=NCBI_GP:HJH9174375.1;Name=HJH9174375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461616.1;locus_tag=O5C65_004360;product=RnfH family protein;protein_id=HJH9174375.1;transl_table=11 DALFDA020000036.1 tpg gene 23879 24316 . - . ID=gene-O5C65_004361;Name=O5C65_004361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004361 DALFDA020000036.1 Protein Homology CDS 23879 24316 . - 0 ID=cds-HJH9174376.1;Parent=gene-O5C65_004361;Dbxref=NCBI_GP:HJH9174376.1;Name=HJH9174376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543334.1;locus_tag=O5C65_004361;product=type II toxin-antitoxin system RatA family toxin;protein_id=HJH9174376.1;transl_table=11 DALFDA020000036.1 tpg gene 24505 24987 . + . ID=gene-O5C65_004362;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=O5C65_004362 DALFDA020000036.1 Protein Homology CDS 24505 24987 . + 0 ID=cds-HJH9174377.1;Parent=gene-O5C65_004362;Dbxref=NCBI_GP:HJH9174377.1;Name=HJH9174377.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461618.1;locus_tag=O5C65_004362;product=SsrA-binding protein SmpB;protein_id=HJH9174377.1;transl_table=11 DALFDA020000036.1 tpg gene 25602 37076 . + . ID=gene-O5C65_004363;Name=bapA;gbkey=Gene;gene=bapA;gene_biotype=protein_coding;locus_tag=O5C65_004363 DALFDA020000036.1 Protein Homology CDS 25602 37076 . + 0 ID=cds-HJH9174378.1;Parent=gene-O5C65_004363;Dbxref=NCBI_GP:HJH9174378.1;Name=HJH9174378.1;gbkey=CDS;gene=bapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237670.1;locus_tag=O5C65_004363;product=biofilm-associated protein BapA;protein_id=HJH9174378.1;transl_table=11 DALFDA020000036.1 tpg gene 37141 38550 . + . ID=gene-O5C65_004364;Name=O5C65_004364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004364 DALFDA020000036.1 Protein Homology CDS 37141 38550 . + 0 ID=cds-HJH9174379.1;Parent=gene-O5C65_004364;Dbxref=NCBI_GP:HJH9174379.1;Name=HJH9174379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461619.1;locus_tag=O5C65_004364;product=TolC family outer membrane protein;protein_id=HJH9174379.1;transl_table=11 DALFDA020000036.1 tpg gene 38547 40727 . + . ID=gene-O5C65_004365;Name=O5C65_004365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004365 DALFDA020000036.1 Protein Homology CDS 38547 40727 . + 0 ID=cds-HJH9174380.1;Parent=gene-O5C65_004365;Dbxref=NCBI_GP:HJH9174380.1;Name=HJH9174380.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461620.1;locus_tag=O5C65_004365;product=type I secretion system permease/ATPase;protein_id=HJH9174380.1;transl_table=11 DALFDA020000036.1 tpg gene 40735 41898 . + . ID=gene-O5C65_004366;Name=O5C65_004366;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004366 DALFDA020000036.1 Protein Homology CDS 40735 41898 . + 0 ID=cds-HJH9174381.1;Parent=gene-O5C65_004366;Dbxref=NCBI_GP:HJH9174381.1;Name=HJH9174381.1;Ontology_term=GO:0015031,GO:0030253,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461621.1;locus_tag=O5C65_004366;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=HJH9174381.1;transl_table=11 DALFDA020000036.1 tpg gene 41970 42332 . + . ID=gene-O5C65_004367;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=O5C65_004367 DALFDA020000036.1 cmsearch tmRNA 41970 42332 . + . ID=rna-O5C65_004367;Parent=gene-O5C65_004367;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_004367;product=transfer-messenger RNA DALFDA020000036.1 cmsearch exon 41970 42332 . + . ID=exon-O5C65_004367-1;Parent=rna-O5C65_004367;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_004367;product=transfer-messenger RNA DALFDA020000036.1 tpg gene 42500 43732 . + . ID=gene-O5C65_004368;Name=O5C65_004368;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004368 DALFDA020000036.1 Protein Homology CDS 42500 43732 . + 0 ID=cds-HJH9174382.1;Parent=gene-O5C65_004368;Dbxref=NCBI_GP:HJH9174382.1;Name=HJH9174382.1;Ontology_term=GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF007246.0;locus_tag=O5C65_004368;product=integrase domain-containing protein;protein_id=HJH9174382.1;transl_table=11 DALFDA020000036.1 tpg gene 43818 44829 . + . ID=gene-O5C65_004369;Name=O5C65_004369;end_range=44829,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004369;partial=true DALFDA020000036.1 GeneMarkS-2+ CDS 43818 44829 . + 0 ID=cds-HJH9174383.1;Parent=gene-O5C65_004369;Dbxref=NCBI_GP:HJH9174383.1;Name=HJH9174383.1;end_range=44829,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004369;partial=true;product=hypothetical protein;protein_id=HJH9174383.1;transl_table=11 ##sequence-region DALFDA020000037.1 1 39632 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000037.1 tpg region 1 39632 . + . ID=DALFDA020000037.1:1..39632;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000037.1 tpg gene 291 947 . - . ID=gene-O5C65_004370;Name=O5C65_004370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004370 DALFDA020000037.1 Protein Homology CDS 291 947 . - 0 ID=cds-HJH9174384.1;Parent=gene-O5C65_004370;Dbxref=NCBI_GP:HJH9174384.1;Name=HJH9174384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004702111.1;locus_tag=O5C65_004370;product=MgtC/SapB family protein;protein_id=HJH9174384.1;transl_table=11 DALFDA020000037.1 tpg gene 1420 1647 . - . ID=gene-O5C65_004371;Name=O5C65_004371;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004371 DALFDA020000037.1 Protein Homology CDS 1420 1647 . - 0 ID=cds-HJH9174385.1;Parent=gene-O5C65_004371;Dbxref=NCBI_GP:HJH9174385.1;Name=HJH9174385.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750454.1;locus_tag=O5C65_004371;product=helix-turn-helix domain-containing protein;protein_id=HJH9174385.1;transl_table=11 DALFDA020000037.1 tpg gene 1960 2343 . + . ID=gene-O5C65_004372;Name=O5C65_004372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004372 DALFDA020000037.1 Protein Homology CDS 1960 2343 . + 0 ID=cds-HJH9174386.1;Parent=gene-O5C65_004372;Dbxref=NCBI_GP:HJH9174386.1;Name=HJH9174386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750452.1;locus_tag=O5C65_004372;product=hypothetical protein;protein_id=HJH9174386.1;transl_table=11 DALFDA020000037.1 tpg gene 2594 3367 . - . ID=gene-O5C65_004373;Name=O5C65_004373;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004373 DALFDA020000037.1 Protein Homology CDS 2594 3367 . - 0 ID=cds-HJH9174387.1;Parent=gene-O5C65_004373;Dbxref=NCBI_GP:HJH9174387.1;Name=HJH9174387.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:NF014035.6;locus_tag=O5C65_004373;product=sulfite exporter TauE/SafE family protein;protein_id=HJH9174387.1;transl_table=11 DALFDA020000037.1 tpg gene 3602 4375 . + . ID=gene-O5C65_004374;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=O5C65_004374 DALFDA020000037.1 Protein Homology CDS 3602 4375 . + 0 ID=cds-HJH9174388.1;Parent=gene-O5C65_004374;Dbxref=NCBI_GP:HJH9174388.1;Name=HJH9174388.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750450.1;locus_tag=O5C65_004374;product=thiol:disulfide interchange protein DsbG;protein_id=HJH9174388.1;transl_table=11 DALFDA020000037.1 tpg gene 4410 4751 . + . ID=gene-O5C65_004375;Name=O5C65_004375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004375 DALFDA020000037.1 Protein Homology CDS 4410 4751 . + 0 ID=cds-HJH9174389.1;Parent=gene-O5C65_004375;Dbxref=NCBI_GP:HJH9174389.1;Name=HJH9174389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750449.1;locus_tag=O5C65_004375;product=DsrE family protein;protein_id=HJH9174389.1;transl_table=11 DALFDA020000037.1 tpg pseudogene 5111 5188 . - . ID=gene-O5C65_004376;Name=O5C65_004376;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004376;pseudo=true DALFDA020000037.1 Protein Homology CDS 5111 5188 . - 0 ID=cds-O5C65_004376;Parent=gene-O5C65_004376;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838536.1;locus_tag=O5C65_004376;product=VOC family protein;pseudo=true;transl_table=11 DALFDA020000037.1 tpg gene 5661 8348 . - . ID=gene-O5C65_004377;Name=O5C65_004377;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004377 DALFDA020000037.1 Protein Homology CDS 5661 8348 . - 0 ID=cds-HJH9174390.1;Parent=gene-O5C65_004377;Dbxref=NCBI_GP:HJH9174390.1;Name=HJH9174390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001696166.1;locus_tag=O5C65_004377;product=autotransporter domain-containing protein;protein_id=HJH9174390.1;transl_table=11 DALFDA020000037.1 tpg gene 8352 10757 . - . ID=gene-O5C65_004378;Name=O5C65_004378;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004378 DALFDA020000037.1 Protein Homology CDS 8352 10757 . - 0 ID=cds-HJH9174391.1;Parent=gene-O5C65_004378;Dbxref=NCBI_GP:HJH9174391.1;Name=HJH9174391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002955103.1;locus_tag=O5C65_004378;product=polysaccharide lyase 8 family protein;protein_id=HJH9174391.1;transl_table=11 DALFDA020000037.1 tpg gene 10776 11780 . - . ID=gene-O5C65_004379;Name=O5C65_004379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004379 DALFDA020000037.1 Protein Homology CDS 10776 11780 . - 0 ID=cds-HJH9174392.1;Parent=gene-O5C65_004379;Dbxref=NCBI_GP:HJH9174392.1;Name=HJH9174392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002955102.1;locus_tag=O5C65_004379;product=hypothetical protein;protein_id=HJH9174392.1;transl_table=11 DALFDA020000037.1 tpg gene 11823 13289 . - . ID=gene-O5C65_004380;Name=O5C65_004380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004380 DALFDA020000037.1 Protein Homology CDS 11823 13289 . - 0 ID=cds-HJH9174393.1;Parent=gene-O5C65_004380;Dbxref=NCBI_GP:HJH9174393.1;Name=HJH9174393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750446.1;locus_tag=O5C65_004380;product=DUF2264 domain-containing protein;protein_id=HJH9174393.1;transl_table=11 DALFDA020000037.1 tpg gene 13314 14348 . - . ID=gene-O5C65_004381;Name=O5C65_004381;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004381 DALFDA020000037.1 Protein Homology CDS 13314 14348 . - 0 ID=cds-HJH9174394.1;Parent=gene-O5C65_004381;Dbxref=NCBI_GP:HJH9174394.1;Name=HJH9174394.1;Ontology_term=GO:0005975,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750445.1;locus_tag=O5C65_004381;product=glycoside hydrolase family 88/105 protein;protein_id=HJH9174394.1;transl_table=11 DALFDA020000037.1 tpg gene 14427 14864 . - . ID=gene-O5C65_004382;Name=agaF;gbkey=Gene;gene=agaF;gene_biotype=protein_coding;locus_tag=O5C65_004382 DALFDA020000037.1 Protein Homology CDS 14427 14864 . - 0 ID=cds-HJH9174395.1;Parent=gene-O5C65_004382;Dbxref=NCBI_GP:HJH9174395.1;Name=HJH9174395.1;gbkey=CDS;gene=agaF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001696170.1;locus_tag=O5C65_004382;product=PTS galactosamine/N-acetylgalactosamine transporter subunit IIA;protein_id=HJH9174395.1;transl_table=11 DALFDA020000037.1 tpg gene 14874 15740 . - . ID=gene-O5C65_004383;Name=O5C65_004383;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004383 DALFDA020000037.1 Protein Homology CDS 14874 15740 . - 0 ID=cds-HJH9174396.1;Parent=gene-O5C65_004383;Dbxref=NCBI_GP:HJH9174396.1;Name=HJH9174396.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001767853.1;locus_tag=O5C65_004383;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=HJH9174396.1;transl_table=11 DALFDA020000037.1 tpg gene 15730 16503 . - . ID=gene-O5C65_004384;Name=agaW;gbkey=Gene;gene=agaW;gene_biotype=protein_coding;locus_tag=O5C65_004384 DALFDA020000037.1 Protein Homology CDS 15730 16503 . - 0 ID=cds-HJH9174397.1;Parent=gene-O5C65_004384;Dbxref=NCBI_GP:HJH9174397.1;Name=HJH9174397.1;gbkey=CDS;gene=agaW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244210.1;locus_tag=O5C65_004384;product=PTS N-acetylgalactosamine transporter subunit IIC;protein_id=HJH9174397.1;transl_table=11 DALFDA020000037.1 tpg gene 16520 16993 . - . ID=gene-O5C65_004385;Name=O5C65_004385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004385 DALFDA020000037.1 Protein Homology CDS 16520 16993 . - 0 ID=cds-HJH9174398.1;Parent=gene-O5C65_004385;Dbxref=NCBI_GP:HJH9174398.1;Name=HJH9174398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284309.1;locus_tag=O5C65_004385;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=HJH9174398.1;transl_table=11 DALFDA020000037.1 tpg gene 17107 17895 . - . ID=gene-O5C65_004386;Name=O5C65_004386;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004386 DALFDA020000037.1 Protein Homology CDS 17107 17895 . - 0 ID=cds-HJH9174399.1;Parent=gene-O5C65_004386;Dbxref=NCBI_GP:HJH9174399.1;Name=HJH9174399.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750440.1;locus_tag=O5C65_004386;product=DeoR family transcriptional regulator;protein_id=HJH9174399.1;transl_table=11 DALFDA020000037.1 tpg gene 19046 19369 . + . ID=gene-O5C65_004387;Name=O5C65_004387;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004387 DALFDA020000037.1 GeneMarkS-2+ CDS 19046 19369 . + 0 ID=cds-HJH9174400.1;Parent=gene-O5C65_004387;Dbxref=NCBI_GP:HJH9174400.1;Name=HJH9174400.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004387;product=hypothetical protein;protein_id=HJH9174400.1;transl_table=11 DALFDA020000037.1 tpg gene 19559 19969 . + . ID=gene-O5C65_004388;Name=O5C65_004388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004388 DALFDA020000037.1 Protein Homology CDS 19559 19969 . + 0 ID=cds-HJH9174401.1;Parent=gene-O5C65_004388;Dbxref=NCBI_GP:HJH9174401.1;Name=HJH9174401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750434.1;locus_tag=O5C65_004388;product=TIGR03757 family integrating conjugative element protein;protein_id=HJH9174401.1;transl_table=11 DALFDA020000037.1 tpg gene 19966 20958 . + . ID=gene-O5C65_004389;Name=O5C65_004389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004389 DALFDA020000037.1 Protein Homology CDS 19966 20958 . + 0 ID=cds-HJH9174402.1;Parent=gene-O5C65_004389;Dbxref=NCBI_GP:HJH9174402.1;Name=HJH9174402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750435.1;locus_tag=O5C65_004389;product=TIGR03756 family integrating conjugative element protein;protein_id=HJH9174402.1;transl_table=11 DALFDA020000037.1 tpg gene 20967 22406 . + . ID=gene-O5C65_004390;Name=O5C65_004390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004390 DALFDA020000037.1 Protein Homology CDS 20967 22406 . + 0 ID=cds-HJH9174403.1;Parent=gene-O5C65_004390;Dbxref=NCBI_GP:HJH9174403.1;Name=HJH9174403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000727404.1;locus_tag=O5C65_004390;product=integrating conjugative element protein;protein_id=HJH9174403.1;transl_table=11 DALFDA020000037.1 tpg gene 22406 22780 . + . ID=gene-O5C65_004391;Name=O5C65_004391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004391 DALFDA020000037.1 GeneMarkS-2+ CDS 22406 22780 . + 0 ID=cds-HJH9174404.1;Parent=gene-O5C65_004391;Dbxref=NCBI_GP:HJH9174404.1;Name=HJH9174404.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004391;product=hypothetical protein;protein_id=HJH9174404.1;transl_table=11 DALFDA020000037.1 tpg gene 22791 24314 . + . ID=gene-O5C65_004392;Name=O5C65_004392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004392 DALFDA020000037.1 Protein Homology CDS 22791 24314 . + 0 ID=cds-HJH9174405.1;Parent=gene-O5C65_004392;Dbxref=NCBI_GP:HJH9174405.1;Name=HJH9174405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105560.1;locus_tag=O5C65_004392;product=conjugal transfer protein TraG N-terminal domain-containing protein;protein_id=HJH9174405.1;transl_table=11 DALFDA020000037.1 tpg gene 24365 24775 . - . ID=gene-O5C65_004393;Name=O5C65_004393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004393 DALFDA020000037.1 Protein Homology CDS 24365 24775 . - 0 ID=cds-HJH9174406.1;Parent=gene-O5C65_004393;Dbxref=NCBI_GP:HJH9174406.1;Name=HJH9174406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000064063.1;locus_tag=O5C65_004393;product=hypothetical protein;protein_id=HJH9174406.1;transl_table=11 DALFDA020000037.1 tpg gene 25073 25363 . + . ID=gene-O5C65_004394;Name=O5C65_004394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004394 DALFDA020000037.1 Protein Homology CDS 25073 25363 . + 0 ID=cds-HJH9174407.1;Parent=gene-O5C65_004394;Dbxref=NCBI_GP:HJH9174407.1;Name=HJH9174407.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017845.6;locus_tag=O5C65_004394;product=PerC family transcriptional regulator;protein_id=HJH9174407.1;transl_table=11 DALFDA020000037.1 tpg gene 25387 25737 . + . ID=gene-O5C65_004395;Name=O5C65_004395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004395 DALFDA020000037.1 GeneMarkS-2+ CDS 25387 25737 . + 0 ID=cds-HJH9174408.1;Parent=gene-O5C65_004395;Dbxref=NCBI_GP:HJH9174408.1;Name=HJH9174408.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004395;product=hypothetical protein;protein_id=HJH9174408.1;transl_table=11 DALFDA020000037.1 tpg gene 25982 26305 . - . ID=gene-O5C65_004396;Name=O5C65_004396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004396 DALFDA020000037.1 Protein Homology CDS 25982 26305 . - 0 ID=cds-HJH9174409.1;Parent=gene-O5C65_004396;Dbxref=NCBI_GP:HJH9174409.1;Name=HJH9174409.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018214.6;locus_tag=O5C65_004396;product=DUF1090 domain-containing protein;protein_id=HJH9174409.1;transl_table=11 DALFDA020000037.1 tpg gene 26295 26705 . + . ID=gene-O5C65_004397;Name=O5C65_004397;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004397 DALFDA020000037.1 GeneMarkS-2+ CDS 26295 26705 . + 0 ID=cds-HJH9174410.1;Parent=gene-O5C65_004397;Dbxref=NCBI_GP:HJH9174410.1;Name=HJH9174410.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004397;product=YncE family protein;protein_id=HJH9174410.1;transl_table=11 DALFDA020000037.1 tpg gene 26702 26914 . + . ID=gene-O5C65_004398;Name=O5C65_004398;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004398 DALFDA020000037.1 GeneMarkS-2+ CDS 26702 26914 . + 0 ID=cds-HJH9174411.1;Parent=gene-O5C65_004398;Dbxref=NCBI_GP:HJH9174411.1;Name=HJH9174411.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004398;product=hypothetical protein;protein_id=HJH9174411.1;transl_table=11 DALFDA020000037.1 tpg pseudogene 27005 27178 . + . ID=gene-O5C65_004399;Name=O5C65_004399;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004399;pseudo=true DALFDA020000037.1 Protein Homology CDS 27005 27178 . + 0 ID=cds-O5C65_004399;Parent=gene-O5C65_004399;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152817.1;locus_tag=O5C65_004399;product=IS481 family transposase;pseudo=true;transl_table=11 DALFDA020000037.1 tpg gene 27211 27810 . - . ID=gene-O5C65_004400;Name=O5C65_004400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004400 DALFDA020000037.1 Protein Homology CDS 27211 27810 . - 0 ID=cds-HJH9174412.1;Parent=gene-O5C65_004400;Dbxref=NCBI_GP:HJH9174412.1;Name=HJH9174412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014593738.1;locus_tag=O5C65_004400;product=NlpC/P60 family protein;protein_id=HJH9174412.1;transl_table=11 DALFDA020000037.1 tpg pseudogene 28168 28272 . - . ID=gene-O5C65_004401;Name=O5C65_004401;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004401;pseudo=true DALFDA020000037.1 Protein Homology CDS 28168 28272 . - 0 ID=cds-O5C65_004401;Parent=gene-O5C65_004401;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001889101.1;locus_tag=O5C65_004401;product=IS481 family transposase;pseudo=true;transl_table=11 DALFDA020000037.1 tpg gene 28299 29099 . - . ID=gene-O5C65_004402;Name=O5C65_004402;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004402 DALFDA020000037.1 Protein Homology CDS 28299 29099 . - 0 ID=cds-HJH9174413.1;Parent=gene-O5C65_004402;Dbxref=NCBI_GP:HJH9174413.1;Name=HJH9174413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750424.1;locus_tag=O5C65_004402;product=transcriptional regulator;protein_id=HJH9174413.1;transl_table=11 DALFDA020000037.1 tpg gene 29086 29598 . - . ID=gene-O5C65_004403;Name=O5C65_004403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004403 DALFDA020000037.1 Protein Homology CDS 29086 29598 . - 0 ID=cds-HJH9174414.1;Parent=gene-O5C65_004403;Dbxref=NCBI_GP:HJH9174414.1;Name=HJH9174414.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727965.1;locus_tag=O5C65_004403;product=CaiF/GrlA family transcriptional regulator;protein_id=HJH9174414.1;transl_table=11 DALFDA020000037.1 tpg gene 29727 30953 . - . ID=gene-O5C65_004404;Name=O5C65_004404;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004404 DALFDA020000037.1 Protein Homology CDS 29727 30953 . - 0 ID=cds-HJH9174415.1;Parent=gene-O5C65_004404;Dbxref=NCBI_GP:HJH9174415.1;Name=HJH9174415.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF012635.6;locus_tag=O5C65_004404;product=fimbrial protein;protein_id=HJH9174415.1;transl_table=11 DALFDA020000037.1 tpg gene 30946 31698 . - . ID=gene-O5C65_004405;Name=O5C65_004405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004405 DALFDA020000037.1 Protein Homology CDS 30946 31698 . - 0 ID=cds-HJH9174416.1;Parent=gene-O5C65_004405;Dbxref=NCBI_GP:HJH9174416.1;Name=HJH9174416.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002952992.1;locus_tag=O5C65_004405;product=fimbria/pilus periplasmic chaperone;protein_id=HJH9174416.1;transl_table=11 DALFDA020000037.1 tpg gene 31773 34262 . - . ID=gene-O5C65_004406;Name=stdB;gbkey=Gene;gene=stdB;gene_biotype=protein_coding;locus_tag=O5C65_004406 DALFDA020000037.1 Protein Homology CDS 31773 34262 . - 0 ID=cds-HJH9174417.1;Parent=gene-O5C65_004406;Dbxref=NCBI_GP:HJH9174417.1;Name=HJH9174417.1;gbkey=CDS;gene=stdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461945.1;locus_tag=O5C65_004406;product=fimbrial outer membrane usher protein StdB;protein_id=HJH9174417.1;transl_table=11 DALFDA020000037.1 tpg gene 34451 35056 . - . ID=gene-O5C65_004407;Name=O5C65_004407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004407 DALFDA020000037.1 Protein Homology CDS 34451 35056 . - 0 ID=cds-HJH9174418.1;Parent=gene-O5C65_004407;Dbxref=NCBI_GP:HJH9174418.1;Name=HJH9174418.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001244654.1;locus_tag=O5C65_004407;product=fimbrial protein;protein_id=HJH9174418.1;transl_table=11 DALFDA020000037.1 tpg pseudogene 35758 36087 . - . ID=gene-O5C65_004408;Name=O5C65_004408;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004408;pseudo=true DALFDA020000037.1 Protein Homology CDS 35758 36087 . - 0 ID=cds-O5C65_004408;Parent=gene-O5C65_004408;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447023.1;locus_tag=O5C65_004408;product=IS21 family transposase;pseudo=true;transl_table=11 DALFDA020000037.1 tpg pseudogene 36110 36226 . + . ID=gene-O5C65_004409;Name=O5C65_004409;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004409;pseudo=true DALFDA020000037.1 Protein Homology CDS 36110 36226 . + 0 ID=cds-O5C65_004409;Parent=gene-O5C65_004409;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611384.1;locus_tag=O5C65_004409;product=transposase;pseudo=true;transl_table=11 DALFDA020000037.1 tpg gene 36677 37687 . - . ID=gene-O5C65_004410;Name=O5C65_004410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004410 DALFDA020000037.1 Protein Homology CDS 36677 37687 . - 0 ID=cds-HJH9174419.1;Parent=gene-O5C65_004410;Dbxref=NCBI_GP:HJH9174419.1;Name=HJH9174419.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000487120.1;locus_tag=O5C65_004410;product=IS110 family transposase;protein_id=HJH9174419.1;transl_table=11 DALFDA020000037.1 tpg pseudogene 37692 38249 . + . ID=gene-O5C65_004411;Name=O5C65_004411;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004411;pseudo=true DALFDA020000037.1 Protein Homology CDS 37692 38249 . + 0 ID=cds-O5C65_004411;Parent=gene-O5C65_004411;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=O5C65_004411;product=IS3 family transposase;pseudo=true;transl_table=11 DALFDA020000037.1 tpg gene 38461 39015 . + . ID=gene-O5C65_004412;Name=O5C65_004412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004412 DALFDA020000037.1 GeneMarkS-2+ CDS 38461 39015 . + 0 ID=cds-HJH9174420.1;Parent=gene-O5C65_004412;Dbxref=NCBI_GP:HJH9174420.1;Name=HJH9174420.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004412;product=hypothetical protein;protein_id=HJH9174420.1;transl_table=11 DALFDA020000037.1 tpg gene 39082 39632 . + . ID=gene-O5C65_004413;Name=O5C65_004413;end_range=39632,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004413;partial=true DALFDA020000037.1 GeneMarkS-2+ CDS 39082 39632 . + 0 ID=cds-HJH9174421.1;Parent=gene-O5C65_004413;Dbxref=NCBI_GP:HJH9174421.1;Name=HJH9174421.1;end_range=39632,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004413;partial=true;product=hypothetical protein;protein_id=HJH9174421.1;transl_table=11 ##sequence-region DALFDA020000038.1 1 39254 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000038.1 tpg region 1 39254 . + . ID=DALFDA020000038.1:1..39254;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000038.1 tpg gene 1 1363 . - . ID=gene-O5C65_004414;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=O5C65_004414;partial=true;start_range=.,1 DALFDA020000038.1 Protein Homology CDS 1 1363 . - 0 ID=cds-HJH9174422.1;Parent=gene-O5C65_004414;Dbxref=NCBI_GP:HJH9174422.1;Name=HJH9174422.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=O5C65_004414;partial=true;product=leucine--tRNA ligase;protein_id=HJH9174422.1;start_range=.,1;transl_table=11 DALFDA020000038.1 tpg gene 1600 1941 . + . ID=gene-O5C65_004415;Name=O5C65_004415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004415 DALFDA020000038.1 Protein Homology CDS 1600 1941 . + 0 ID=cds-HJH9174423.1;Parent=gene-O5C65_004415;Dbxref=NCBI_GP:HJH9174423.1;Name=HJH9174423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447100.1;locus_tag=O5C65_004415;product=UxaA family hydrolase;protein_id=HJH9174423.1;transl_table=11 DALFDA020000038.1 tpg gene 1958 3130 . + . ID=gene-O5C65_004416;Name=O5C65_004416;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004416 DALFDA020000038.1 Protein Homology CDS 1958 3130 . + 0 ID=cds-HJH9174424.1;Parent=gene-O5C65_004416;Dbxref=NCBI_GP:HJH9174424.1;Name=HJH9174424.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447101.1;locus_tag=O5C65_004416;product=UxaA family hydrolase;protein_id=HJH9174424.1;transl_table=11 DALFDA020000038.1 tpg gene 3180 4133 . + . ID=gene-O5C65_004417;Name=O5C65_004417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004417 DALFDA020000038.1 Protein Homology CDS 3180 4133 . + 0 ID=cds-HJH9174425.1;Parent=gene-O5C65_004417;Dbxref=NCBI_GP:HJH9174425.1;Name=HJH9174425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459643.1;locus_tag=O5C65_004417;product=2-keto-3-deoxygluconate permease 2;protein_id=HJH9174425.1;transl_table=11 DALFDA020000038.1 tpg gene 4201 6129 . + . ID=gene-O5C65_004418;Name=O5C65_004418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004418 DALFDA020000038.1 Protein Homology CDS 4201 6129 . + 0 ID=cds-HJH9174426.1;Parent=gene-O5C65_004418;Dbxref=NCBI_GP:HJH9174426.1;Name=HJH9174426.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459644.1;locus_tag=O5C65_004418;product=sigma 54-interacting transcriptional regulator;protein_id=HJH9174426.1;transl_table=11 DALFDA020000038.1 tpg gene 6222 6695 . + . ID=gene-O5C65_004419;Name=O5C65_004419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004419 DALFDA020000038.1 Protein Homology CDS 6222 6695 . + 0 ID=cds-HJH9174427.1;Parent=gene-O5C65_004419;Dbxref=NCBI_GP:HJH9174427.1;Name=HJH9174427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459645.1;locus_tag=O5C65_004419;product=zinc ribbon-containing protein;protein_id=HJH9174427.1;transl_table=11 DALFDA020000038.1 tpg gene 6777 7718 . + . ID=gene-O5C65_004420;Name=O5C65_004420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004420 DALFDA020000038.1 Protein Homology CDS 6777 7718 . + 0 ID=cds-HJH9174428.1;Parent=gene-O5C65_004420;Dbxref=NCBI_GP:HJH9174428.1;Name=HJH9174428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001100314.1;locus_tag=O5C65_004420;product=hypothetical protein;protein_id=HJH9174428.1;transl_table=11 DALFDA020000038.1 tpg gene 7747 8745 . - . ID=gene-O5C65_004421;Name=O5C65_004421;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004421 DALFDA020000038.1 Protein Homology CDS 7747 8745 . - 0 ID=cds-HJH9174429.1;Parent=gene-O5C65_004421;Dbxref=NCBI_GP:HJH9174429.1;Name=HJH9174429.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459646.1;locus_tag=O5C65_004421;product=tetratricopeptide repeat protein;protein_id=HJH9174429.1;transl_table=11 DALFDA020000038.1 tpg gene 8870 9577 . + . ID=gene-O5C65_004422;Name=O5C65_004422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004422 DALFDA020000038.1 Protein Homology CDS 8870 9577 . + 0 ID=cds-HJH9174430.1;Parent=gene-O5C65_004422;Dbxref=NCBI_GP:HJH9174430.1;Name=HJH9174430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459647.1;locus_tag=O5C65_004422;product=DUF1266 domain-containing protein;protein_id=HJH9174430.1;transl_table=11 DALFDA020000038.1 tpg gene 9574 11007 . + . ID=gene-O5C65_004423;Name=O5C65_004423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004423 DALFDA020000038.1 Protein Homology CDS 9574 11007 . + 0 ID=cds-HJH9174431.1;Parent=gene-O5C65_004423;Dbxref=NCBI_GP:HJH9174431.1;Name=HJH9174431.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459648.1;locus_tag=O5C65_004423;product=J domain-containing protein;protein_id=HJH9174431.1;transl_table=11 DALFDA020000038.1 tpg gene 11019 11723 . + . ID=gene-O5C65_004424;Name=O5C65_004424;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004424 DALFDA020000038.1 Protein Homology CDS 11019 11723 . + 0 ID=cds-HJH9174432.1;Parent=gene-O5C65_004424;Dbxref=NCBI_GP:HJH9174432.1;Name=HJH9174432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459649.1;locus_tag=O5C65_004424;product=DUF1266 domain-containing protein;protein_id=HJH9174432.1;transl_table=11 DALFDA020000038.1 tpg gene 11720 13183 . + . ID=gene-O5C65_004425;Name=O5C65_004425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004425 DALFDA020000038.1 Protein Homology CDS 11720 13183 . + 0 ID=cds-HJH9174433.1;Parent=gene-O5C65_004425;Dbxref=NCBI_GP:HJH9174433.1;Name=HJH9174433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459650.1;locus_tag=O5C65_004425;product=J domain-containing protein;protein_id=HJH9174433.1;transl_table=11 DALFDA020000038.1 tpg gene 13205 14884 . - . ID=gene-O5C65_004426;Name=hscC;gbkey=Gene;gene=hscC;gene_biotype=protein_coding;locus_tag=O5C65_004426 DALFDA020000038.1 Protein Homology CDS 13205 14884 . - 0 ID=cds-HJH9174434.1;Parent=gene-O5C65_004426;Dbxref=NCBI_GP:HJH9174434.1;Name=HJH9174434.1;gbkey=CDS;gene=hscC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459651.1;locus_tag=O5C65_004426;product=molecular chaperone HscC;protein_id=HJH9174434.1;transl_table=11 DALFDA020000038.1 tpg gene 14960 16198 . - . ID=gene-O5C65_004427;Name=O5C65_004427;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004427 DALFDA020000038.1 Protein Homology CDS 14960 16198 . - 0 ID=cds-HJH9174435.1;Parent=gene-O5C65_004427;Dbxref=NCBI_GP:HJH9174435.1;Name=HJH9174435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459652.1;locus_tag=O5C65_004427;product=hypothetical protein;protein_id=HJH9174435.1;transl_table=11 DALFDA020000038.1 tpg gene 16230 17165 . - . ID=gene-O5C65_004428;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=O5C65_004428 DALFDA020000038.1 Protein Homology CDS 16230 17165 . - 0 ID=cds-HJH9174436.1;Parent=gene-O5C65_004428;Dbxref=NCBI_GP:HJH9174436.1;Name=HJH9174436.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459653.1;locus_tag=O5C65_004428;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=HJH9174436.1;transl_table=11 DALFDA020000038.1 tpg gene 17282 18007 . - . ID=gene-O5C65_004429;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=O5C65_004429 DALFDA020000038.1 Protein Homology CDS 17282 18007 . - 0 ID=cds-HJH9174437.1;Parent=gene-O5C65_004429;Dbxref=NCBI_GP:HJH9174437.1;Name=HJH9174437.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=O5C65_004429;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=HJH9174437.1;transl_table=11 DALFDA020000038.1 tpg gene 18007 18681 . - . ID=gene-O5C65_004430;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=O5C65_004430 DALFDA020000038.1 Protein Homology CDS 18007 18681 . - 0 ID=cds-HJH9174438.1;Parent=gene-O5C65_004430;Dbxref=NCBI_GP:HJH9174438.1;Name=HJH9174438.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459655.1;locus_tag=O5C65_004430;product=glutamate/aspartate ABC transporter permease GltK;protein_id=HJH9174438.1;transl_table=11 DALFDA020000038.1 tpg gene 18681 19421 . - . ID=gene-O5C65_004431;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=O5C65_004431 DALFDA020000038.1 Protein Homology CDS 18681 19421 . - 0 ID=cds-HJH9174439.1;Parent=gene-O5C65_004431;Dbxref=NCBI_GP:HJH9174439.1;Name=HJH9174439.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459656.1;locus_tag=O5C65_004431;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=HJH9174439.1;transl_table=11 DALFDA020000038.1 tpg gene 19581 20489 . - . ID=gene-O5C65_004432;Name=O5C65_004432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004432 DALFDA020000038.1 Protein Homology CDS 19581 20489 . - 0 ID=cds-HJH9174440.1;Parent=gene-O5C65_004432;Dbxref=NCBI_GP:HJH9174440.1;Name=HJH9174440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308721.1;locus_tag=O5C65_004432;product=amino acid ABC transporter substrate-binding protein;protein_id=HJH9174440.1;transl_table=11 DALFDA020000038.1 tpg gene 20907 22445 . - . ID=gene-O5C65_004433;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=O5C65_004433 DALFDA020000038.1 Protein Homology CDS 20907 22445 . - 0 ID=cds-HJH9174441.1;Parent=gene-O5C65_004433;Dbxref=NCBI_GP:HJH9174441.1;Name=HJH9174441.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459658.1;locus_tag=O5C65_004433;product=apolipoprotein N-acyltransferase;protein_id=HJH9174441.1;transl_table=11 DALFDA020000038.1 tpg gene 22465 23343 . - . ID=gene-O5C65_004434;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=O5C65_004434 DALFDA020000038.1 Protein Homology CDS 22465 23343 . - 0 ID=cds-HJH9174442.1;Parent=gene-O5C65_004434;Dbxref=NCBI_GP:HJH9174442.1;Name=HJH9174442.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459659.1;locus_tag=O5C65_004434;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=HJH9174442.1;transl_table=11 DALFDA020000038.1 tpg gene 23501 23974 . - . ID=gene-O5C65_004435;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=O5C65_004435 DALFDA020000038.1 Protein Homology CDS 23501 23974 . - 0 ID=cds-HJH9174443.1;Parent=gene-O5C65_004435;Dbxref=NCBI_GP:HJH9174443.1;Name=HJH9174443.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459660.1;locus_tag=O5C65_004435;product=rRNA maturation RNase YbeY;protein_id=HJH9174443.1;transl_table=11 DALFDA020000038.1 tpg gene 23971 25017 . - . ID=gene-O5C65_004436;Name=O5C65_004436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004436 DALFDA020000038.1 Protein Homology CDS 23971 25017 . - 0 ID=cds-HJH9174444.1;Parent=gene-O5C65_004436;Dbxref=NCBI_GP:HJH9174444.1;Name=HJH9174444.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225825.1;locus_tag=O5C65_004436;product=PhoH family protein;protein_id=HJH9174444.1;transl_table=11 DALFDA020000038.1 tpg gene 25222 26646 . - . ID=gene-O5C65_004437;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=O5C65_004437 DALFDA020000038.1 Protein Homology CDS 25222 26646 . - 0 ID=cds-HJH9174445.1;Parent=gene-O5C65_004437;Dbxref=NCBI_GP:HJH9174445.1;Name=HJH9174445.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459662.1;locus_tag=O5C65_004437;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=HJH9174445.1;transl_table=11 DALFDA020000038.1 tpg gene 26790 27965 . + . ID=gene-O5C65_004438;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=O5C65_004438 DALFDA020000038.1 Protein Homology CDS 26790 27965 . + 0 ID=cds-HJH9174446.1;Parent=gene-O5C65_004438;Dbxref=NCBI_GP:HJH9174446.1;Name=HJH9174446.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459663.1;locus_tag=O5C65_004438;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=HJH9174446.1;transl_table=11 DALFDA020000038.1 tpg gene 28098 28172 . - . ID=gene-O5C65_004439;Name=O5C65_004439;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_004439 DALFDA020000038.1 tRNAscan-SE tRNA 28098 28172 . - . ID=rna-O5C65_004439;Parent=gene-O5C65_004439;anticodon=(pos:complement(28138..28140));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004439;product=tRNA-Gln DALFDA020000038.1 tRNAscan-SE exon 28098 28172 . - . ID=exon-O5C65_004439-1;Parent=rna-O5C65_004439;anticodon=(pos:complement(28138..28140));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004439;product=tRNA-Gln DALFDA020000038.1 tpg gene 28216 28290 . - . ID=gene-O5C65_004440;Name=O5C65_004440;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_004440 DALFDA020000038.1 tRNAscan-SE tRNA 28216 28290 . - . ID=rna-O5C65_004440;Parent=gene-O5C65_004440;anticodon=(pos:complement(28256..28258));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004440;product=tRNA-Gln DALFDA020000038.1 tRNAscan-SE exon 28216 28290 . - . ID=exon-O5C65_004440-1;Parent=rna-O5C65_004440;anticodon=(pos:complement(28256..28258));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004440;product=tRNA-Gln DALFDA020000038.1 tpg gene 28337 28413 . - . ID=gene-O5C65_004441;Name=O5C65_004441;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_004441 DALFDA020000038.1 tRNAscan-SE tRNA 28337 28413 . - . ID=rna-O5C65_004441;Parent=gene-O5C65_004441;anticodon=(pos:complement(28377..28379));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004441;product=tRNA-Met DALFDA020000038.1 tRNAscan-SE exon 28337 28413 . - . ID=exon-O5C65_004441-1;Parent=rna-O5C65_004441;anticodon=(pos:complement(28377..28379));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004441;product=tRNA-Met DALFDA020000038.1 tpg gene 28429 28503 . - . ID=gene-O5C65_004442;Name=O5C65_004442;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_004442 DALFDA020000038.1 tRNAscan-SE tRNA 28429 28503 . - . ID=rna-O5C65_004442;Parent=gene-O5C65_004442;anticodon=(pos:complement(28469..28471));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004442;product=tRNA-Gln DALFDA020000038.1 tRNAscan-SE exon 28429 28503 . - . ID=exon-O5C65_004442-1;Parent=rna-O5C65_004442;anticodon=(pos:complement(28469..28471));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004442;product=tRNA-Gln DALFDA020000038.1 tpg gene 28539 28613 . - . ID=gene-O5C65_004443;Name=O5C65_004443;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_004443 DALFDA020000038.1 tRNAscan-SE tRNA 28539 28613 . - . ID=rna-O5C65_004443;Parent=gene-O5C65_004443;anticodon=(pos:complement(28579..28581));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004443;product=tRNA-Gln DALFDA020000038.1 tRNAscan-SE exon 28539 28613 . - . ID=exon-O5C65_004443-1;Parent=rna-O5C65_004443;anticodon=(pos:complement(28579..28581));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004443;product=tRNA-Gln DALFDA020000038.1 tpg gene 28637 28721 . - . ID=gene-O5C65_004444;Name=O5C65_004444;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_004444 DALFDA020000038.1 tRNAscan-SE tRNA 28637 28721 . - . ID=rna-O5C65_004444;Parent=gene-O5C65_004444;anticodon=(pos:complement(28685..28687));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004444;product=tRNA-Leu DALFDA020000038.1 tRNAscan-SE exon 28637 28721 . - . ID=exon-O5C65_004444-1;Parent=rna-O5C65_004444;anticodon=(pos:complement(28685..28687));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004444;product=tRNA-Leu DALFDA020000038.1 tpg gene 28730 28806 . - . ID=gene-O5C65_004445;Name=O5C65_004445;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_004445 DALFDA020000038.1 tRNAscan-SE tRNA 28730 28806 . - . ID=rna-O5C65_004445;Parent=gene-O5C65_004445;anticodon=(pos:complement(28770..28772));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004445;product=tRNA-Met DALFDA020000038.1 tRNAscan-SE exon 28730 28806 . - . ID=exon-O5C65_004445-1;Parent=rna-O5C65_004445;anticodon=(pos:complement(28770..28772));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004445;product=tRNA-Met DALFDA020000038.1 tpg gene 29028 30692 . - . ID=gene-O5C65_004446;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=O5C65_004446 DALFDA020000038.1 Protein Homology CDS 29028 30692 . - 0 ID=cds-HJH9174447.1;Parent=gene-O5C65_004446;Dbxref=NCBI_GP:HJH9174447.1;Name=HJH9174447.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=O5C65_004446;product=asparagine synthase B;protein_id=HJH9174447.1;transl_table=11 DALFDA020000038.1 tpg gene 30982 31734 . - . ID=gene-O5C65_004447;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=O5C65_004447 DALFDA020000038.1 Protein Homology CDS 30982 31734 . - 0 ID=cds-HJH9174448.1;Parent=gene-O5C65_004447;Dbxref=NCBI_GP:HJH9174448.1;Name=HJH9174448.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459666.1;locus_tag=O5C65_004447;product=ribonucleotide monophosphatase NagD;protein_id=HJH9174448.1;transl_table=11 DALFDA020000038.1 tpg gene 31781 33001 . - . ID=gene-O5C65_004448;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=O5C65_004448 DALFDA020000038.1 Protein Homology CDS 31781 33001 . - 0 ID=cds-HJH9174449.1;Parent=gene-O5C65_004448;Dbxref=NCBI_GP:HJH9174449.1;Name=HJH9174449.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459667.1;locus_tag=O5C65_004448;product=DNA-binding transcriptional regulator NagC;protein_id=HJH9174449.1;transl_table=11 DALFDA020000038.1 tpg gene 33006 34160 . - . ID=gene-O5C65_004449;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=O5C65_004449 DALFDA020000038.1 Protein Homology CDS 33006 34160 . - 0 ID=cds-HJH9174450.1;Parent=gene-O5C65_004449;Dbxref=NCBI_GP:HJH9174450.1;Name=HJH9174450.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459668.1;locus_tag=O5C65_004449;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=HJH9174450.1;transl_table=11 DALFDA020000038.1 tpg gene 34220 35020 . - . ID=gene-O5C65_004450;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=O5C65_004450 DALFDA020000038.1 Protein Homology CDS 34220 35020 . - 0 ID=cds-HJH9174451.1;Parent=gene-O5C65_004450;Dbxref=NCBI_GP:HJH9174451.1;Name=HJH9174451.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=O5C65_004450;product=glucosamine-6-phosphate deaminase;protein_id=HJH9174451.1;transl_table=11 DALFDA020000038.1 tpg gene 35347 37299 . + . ID=gene-O5C65_004451;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=O5C65_004451 DALFDA020000038.1 Protein Homology CDS 35347 37299 . + 0 ID=cds-HJH9174452.1;Parent=gene-O5C65_004451;Dbxref=NCBI_GP:HJH9174452.1;Name=HJH9174452.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459670.1;locus_tag=O5C65_004451;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=HJH9174452.1;transl_table=11 DALFDA020000038.1 tpg gene 37510 39177 . + . ID=gene-O5C65_004452;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=O5C65_004452 DALFDA020000038.1 Protein Homology CDS 37510 39177 . + 0 ID=cds-HJH9174453.1;Parent=gene-O5C65_004452;Dbxref=NCBI_GP:HJH9174453.1;Name=HJH9174453.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459671.1;locus_tag=O5C65_004452;product=glutamine--tRNA ligase;protein_id=HJH9174453.1;transl_table=11 ##sequence-region DALFDA020000039.1 1 36366 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000039.1 tpg region 1 36366 . + . ID=DALFDA020000039.1:1..36366;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000039.1 tpg gene 26 3550 . - . ID=gene-O5C65_004453;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=O5C65_004453 DALFDA020000039.1 Protein Homology CDS 26 3550 . - 0 ID=cds-HJH9174454.1;Parent=gene-O5C65_004453;Dbxref=NCBI_GP:HJH9174454.1;Name=HJH9174454.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460610.1;locus_tag=O5C65_004453;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=HJH9174454.1;transl_table=11 DALFDA020000039.1 tpg gene 3611 3910 . - . ID=gene-O5C65_004454;Name=O5C65_004454;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004454 DALFDA020000039.1 Protein Homology CDS 3611 3910 . - 0 ID=cds-HJH9174455.1;Parent=gene-O5C65_004454;Dbxref=NCBI_GP:HJH9174455.1;Name=HJH9174455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460609.1;locus_tag=O5C65_004454;product=reverse transcriptase;protein_id=HJH9174455.1;transl_table=11 DALFDA020000039.1 tpg gene 3826 4092 . + . ID=gene-O5C65_004455;Name=O5C65_004455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004455 DALFDA020000039.1 Protein Homology CDS 3826 4092 . + 0 ID=cds-HJH9174456.1;Parent=gene-O5C65_004455;Dbxref=NCBI_GP:HJH9174456.1;Name=HJH9174456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=O5C65_004455;product=putative hemolysin;protein_id=HJH9174456.1;transl_table=11 DALFDA020000039.1 tpg gene 4136 4546 . - . ID=gene-O5C65_004456;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=O5C65_004456 DALFDA020000039.1 Protein Homology CDS 4136 4546 . - 0 ID=cds-HJH9174457.1;Parent=gene-O5C65_004456;Dbxref=NCBI_GP:HJH9174457.1;Name=HJH9174457.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460607.1;locus_tag=O5C65_004456;product=heat shock protein HslJ;protein_id=HJH9174457.1;transl_table=11 DALFDA020000039.1 tpg gene 4657 5646 . - . ID=gene-O5C65_004457;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=O5C65_004457 DALFDA020000039.1 Protein Homology CDS 4657 5646 . - 0 ID=cds-HJH9174458.1;Parent=gene-O5C65_004457;Dbxref=NCBI_GP:HJH9174458.1;Name=HJH9174458.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460606.1;locus_tag=O5C65_004457;product=D-lactate dehydrogenase;protein_id=HJH9174458.1;transl_table=11 DALFDA020000039.1 tpg gene 5886 8522 . + . ID=gene-O5C65_004458;Name=O5C65_004458;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004458 DALFDA020000039.1 Protein Homology CDS 5886 8522 . + 0 ID=cds-HJH9174459.1;Parent=gene-O5C65_004458;Dbxref=NCBI_GP:HJH9174459.1;Name=HJH9174459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460605.1;locus_tag=O5C65_004458;product=YdbH family protein;protein_id=HJH9174459.1;transl_table=11 DALFDA020000039.1 tpg gene 8522 8713 . + . ID=gene-O5C65_004459;Name=O5C65_004459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004459 DALFDA020000039.1 Protein Homology CDS 8522 8713 . + 0 ID=cds-HJH9174460.1;Parent=gene-O5C65_004459;Dbxref=NCBI_GP:HJH9174460.1;Name=HJH9174460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460604.1;locus_tag=O5C65_004459;product=YnbE family lipoprotein;protein_id=HJH9174460.1;transl_table=11 DALFDA020000039.1 tpg gene 8721 9044 . + . ID=gene-O5C65_004460;Name=O5C65_004460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004460 DALFDA020000039.1 Protein Homology CDS 8721 9044 . + 0 ID=cds-HJH9174461.1;Parent=gene-O5C65_004460;Dbxref=NCBI_GP:HJH9174461.1;Name=HJH9174461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460603.1;locus_tag=O5C65_004460;product=YdbL family protein;protein_id=HJH9174461.1;transl_table=11 DALFDA020000039.1 tpg gene 9187 9636 . + . ID=gene-O5C65_004461;Name=O5C65_004461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004461 DALFDA020000039.1 Protein Homology CDS 9187 9636 . + 0 ID=cds-HJH9174462.1;Parent=gene-O5C65_004461;Dbxref=NCBI_GP:HJH9174462.1;Name=HJH9174462.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460602.1;locus_tag=O5C65_004461;product=GFA family protein;protein_id=HJH9174462.1;transl_table=11 DALFDA020000039.1 tpg gene 9633 10238 . - . ID=gene-O5C65_004462;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=O5C65_004462 DALFDA020000039.1 Protein Homology CDS 9633 10238 . - 0 ID=cds-HJH9174463.1;Parent=gene-O5C65_004462;Dbxref=NCBI_GP:HJH9174463.1;Name=HJH9174463.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460601.1;locus_tag=O5C65_004462;product=FMN-dependent NADH-azoreductase;protein_id=HJH9174463.1;transl_table=11 DALFDA020000039.1 tpg gene 10439 14341 . + . ID=gene-O5C65_004463;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=O5C65_004463 DALFDA020000039.1 Protein Homology CDS 10439 14341 . + 0 ID=cds-HJH9174464.1;Parent=gene-O5C65_004463;Dbxref=NCBI_GP:HJH9174464.1;Name=HJH9174464.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=O5C65_004463;product=ATP-dependent RNA helicase HrpA;protein_id=HJH9174464.1;transl_table=11 DALFDA020000039.1 tpg gene 14405 15205 . + . ID=gene-O5C65_004464;Name=O5C65_004464;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004464 DALFDA020000039.1 Protein Homology CDS 14405 15205 . + 0 ID=cds-HJH9174465.1;Parent=gene-O5C65_004464;Dbxref=NCBI_GP:HJH9174465.1;Name=HJH9174465.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460599.1;locus_tag=O5C65_004464;product=YdcF family protein;protein_id=HJH9174465.1;transl_table=11 DALFDA020000039.1 tpg gene 15322 15852 . + . ID=gene-O5C65_004465;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=O5C65_004465 DALFDA020000039.1 Protein Homology CDS 15322 15852 . + 0 ID=cds-HJH9174466.1;Parent=gene-O5C65_004465;Dbxref=NCBI_GP:HJH9174466.1;Name=HJH9174466.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460598.1;locus_tag=O5C65_004465;product=cytochrome b561;protein_id=HJH9174466.1;transl_table=11 DALFDA020000039.1 tpg gene 16123 16785 . - . ID=gene-O5C65_004466;Name=O5C65_004466;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004466 DALFDA020000039.1 Protein Homology CDS 16123 16785 . - 0 ID=cds-HJH9174467.1;Parent=gene-O5C65_004466;Dbxref=NCBI_GP:HJH9174467.1;Name=HJH9174467.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576082.1;locus_tag=O5C65_004466;product=class I SAM-dependent methyltransferase;protein_id=HJH9174467.1;transl_table=11 DALFDA020000039.1 tpg gene 17249 18799 . - . ID=gene-O5C65_004467;Name=O5C65_004467;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004467 DALFDA020000039.1 Protein Homology CDS 17249 18799 . - 0 ID=cds-HJH9174468.1;Parent=gene-O5C65_004467;Dbxref=NCBI_GP:HJH9174468.1;Name=HJH9174468.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460596.1;locus_tag=O5C65_004467;product=glycosyltransferase family 39 protein;protein_id=HJH9174468.1;transl_table=11 DALFDA020000039.1 tpg gene 18936 19616 . - . ID=gene-O5C65_004468;Name=O5C65_004468;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004468 DALFDA020000039.1 Protein Homology CDS 18936 19616 . - 0 ID=cds-HJH9174469.1;Parent=gene-O5C65_004468;Dbxref=NCBI_GP:HJH9174469.1;Name=HJH9174469.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460595.1;locus_tag=O5C65_004468;product=amino acid ABC transporter permease;protein_id=HJH9174469.1;transl_table=11 DALFDA020000039.1 tpg gene 19613 20344 . - . ID=gene-O5C65_004469;Name=O5C65_004469;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004469 DALFDA020000039.1 Protein Homology CDS 19613 20344 . - 0 ID=cds-HJH9174470.1;Parent=gene-O5C65_004469;Dbxref=NCBI_GP:HJH9174470.1;Name=HJH9174470.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460594.1;locus_tag=O5C65_004469;product=amino acid ABC transporter ATP-binding protein;protein_id=HJH9174470.1;transl_table=11 DALFDA020000039.1 tpg gene 20369 21016 . - . ID=gene-O5C65_004470;Name=O5C65_004470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004470 DALFDA020000039.1 Protein Homology CDS 20369 21016 . - 0 ID=cds-HJH9174471.1;Parent=gene-O5C65_004470;Dbxref=NCBI_GP:HJH9174471.1;Name=HJH9174471.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460593.1;locus_tag=O5C65_004470;product=amino acid ABC transporter permease;protein_id=HJH9174471.1;transl_table=11 DALFDA020000039.1 tpg gene 21023 21784 . - . ID=gene-O5C65_004471;Name=O5C65_004471;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004471 DALFDA020000039.1 Protein Homology CDS 21023 21784 . - 0 ID=cds-HJH9174472.1;Parent=gene-O5C65_004471;Dbxref=NCBI_GP:HJH9174472.1;Name=HJH9174472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460592.1;locus_tag=O5C65_004471;product=transporter substrate-binding domain-containing protein;protein_id=HJH9174472.1;transl_table=11 DALFDA020000039.1 tpg gene 22691 23035 . + . ID=gene-O5C65_004472;Name=O5C65_004472;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004472 DALFDA020000039.1 Protein Homology CDS 22691 23035 . + 0 ID=cds-HJH9174473.1;Parent=gene-O5C65_004472;Dbxref=NCBI_GP:HJH9174473.1;Name=HJH9174473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460591.1;locus_tag=O5C65_004472;product=DUF1294 domain-containing protein;protein_id=HJH9174473.1;transl_table=11 DALFDA020000039.1 tpg gene 23156 24382 . - . ID=gene-O5C65_004473;Name=sseJ;gbkey=Gene;gene=sseJ;gene_biotype=protein_coding;locus_tag=O5C65_004473 DALFDA020000039.1 Protein Homology CDS 23156 24382 . - 0 ID=cds-HJH9174474.1;Parent=gene-O5C65_004473;Dbxref=NCBI_GP:HJH9174474.1;Name=HJH9174474.1;gbkey=CDS;gene=sseJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460590.1;locus_tag=O5C65_004473;product=SPI-2 type III secretion system effector SseJ;protein_id=HJH9174474.1;transl_table=11 DALFDA020000039.1 tpg gene 24808 25524 . + . ID=gene-O5C65_004474;Name=O5C65_004474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004474 DALFDA020000039.1 Protein Homology CDS 24808 25524 . + 0 ID=cds-HJH9174475.1;Parent=gene-O5C65_004474;Dbxref=NCBI_GP:HJH9174475.1;Name=HJH9174475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460589.1;locus_tag=O5C65_004474;product=hypothetical protein;protein_id=HJH9174475.1;transl_table=11 DALFDA020000039.1 tpg gene 25653 26054 . - . ID=gene-O5C65_004475;Name=steB;gbkey=Gene;gene=steB;gene_biotype=protein_coding;locus_tag=O5C65_004475 DALFDA020000039.1 Protein Homology CDS 25653 26054 . - 0 ID=cds-HJH9174476.1;Parent=gene-O5C65_004475;Dbxref=NCBI_GP:HJH9174476.1;Name=HJH9174476.1;gbkey=CDS;gene=steB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448047.1;locus_tag=O5C65_004475;product=type III secretion system effector SteB;protein_id=HJH9174476.1;transl_table=11 DALFDA020000039.1 tpg gene 26603 27874 . - . ID=gene-O5C65_004476;Name=O5C65_004476;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004476 DALFDA020000039.1 Protein Homology CDS 26603 27874 . - 0 ID=cds-HJH9174477.1;Parent=gene-O5C65_004476;Dbxref=NCBI_GP:HJH9174477.1;Name=HJH9174477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132785.1;locus_tag=O5C65_004476;product=Arm DNA-binding domain-containing protein;protein_id=HJH9174477.1;transl_table=11 DALFDA020000039.1 tpg gene 27874 28086 . - . ID=gene-O5C65_004477;Name=xisR;gbkey=Gene;gene=xisR;gene_biotype=protein_coding;locus_tag=O5C65_004477 DALFDA020000039.1 Protein Homology CDS 27874 28086 . - 0 ID=cds-HJH9174478.1;Parent=gene-O5C65_004477;Dbxref=NCBI_GP:HJH9174478.1;Name=HJH9174478.1;gbkey=CDS;gene=xisR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884030.1;locus_tag=O5C65_004477;product=excisionase family protein;protein_id=HJH9174478.1;transl_table=11 DALFDA020000039.1 tpg gene 28150 28371 . - . ID=gene-O5C65_004478;Name=O5C65_004478;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004478 DALFDA020000039.1 GeneMarkS-2+ CDS 28150 28371 . - 0 ID=cds-HJH9174479.1;Parent=gene-O5C65_004478;Dbxref=NCBI_GP:HJH9174479.1;Name=HJH9174479.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004478;product=hypothetical protein;protein_id=HJH9174479.1;transl_table=11 DALFDA020000039.1 tpg gene 28816 29319 . - . ID=gene-O5C65_004479;Name=O5C65_004479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004479 DALFDA020000039.1 Protein Homology CDS 28816 29319 . - 0 ID=cds-HJH9174480.1;Parent=gene-O5C65_004479;Dbxref=NCBI_GP:HJH9174480.1;Name=HJH9174480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016060751.1;locus_tag=O5C65_004479;product=siphovirus Gp157 family protein;protein_id=HJH9174480.1;transl_table=11 DALFDA020000039.1 tpg gene 29316 31655 . - . ID=gene-O5C65_004480;Name=O5C65_004480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004480 DALFDA020000039.1 Protein Homology CDS 29316 31655 . - 0 ID=cds-HJH9174481.1;Parent=gene-O5C65_004480;Dbxref=NCBI_GP:HJH9174481.1;Name=HJH9174481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544047.1;locus_tag=O5C65_004480;product=exodeoxyribonuclease VIII;protein_id=HJH9174481.1;transl_table=11 DALFDA020000039.1 tpg gene 31666 31962 . - . ID=gene-O5C65_004481;Name=O5C65_004481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004481 DALFDA020000039.1 Protein Homology CDS 31666 31962 . - 0 ID=cds-HJH9174482.1;Parent=gene-O5C65_004481;Dbxref=NCBI_GP:HJH9174482.1;Name=HJH9174482.1;Ontology_term=GO:0060703;gbkey=CDS;go_function=deoxyribonuclease inhibitor activity|0060703||IEA;inference=COORDINATES: protein motif:HMM:NF017841.6;locus_tag=O5C65_004481;product=host-nuclease inhibitor Gam family protein;protein_id=HJH9174482.1;transl_table=11 DALFDA020000039.1 tpg gene 32006 32341 . - . ID=gene-O5C65_004482;Name=O5C65_004482;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004482 DALFDA020000039.1 GeneMarkS-2+ CDS 32006 32341 . - 0 ID=cds-HJH9174483.1;Parent=gene-O5C65_004482;Dbxref=NCBI_GP:HJH9174483.1;Name=HJH9174483.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004482;product=hypothetical protein;protein_id=HJH9174483.1;transl_table=11 DALFDA020000039.1 tpg gene 32408 32614 . - . ID=gene-O5C65_004483;Name=O5C65_004483;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004483 DALFDA020000039.1 Protein Homology CDS 32408 32614 . - 0 ID=cds-HJH9174484.1;Parent=gene-O5C65_004483;Dbxref=NCBI_GP:HJH9174484.1;Name=HJH9174484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000682660.1;locus_tag=O5C65_004483;product=cell division inhibitor protein;protein_id=HJH9174484.1;transl_table=11 DALFDA020000039.1 tpg gene 32637 32969 . - . ID=gene-O5C65_004484;Name=O5C65_004484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004484 DALFDA020000039.1 GeneMarkS-2+ CDS 32637 32969 . - 0 ID=cds-HJH9174485.1;Parent=gene-O5C65_004484;Dbxref=NCBI_GP:HJH9174485.1;Name=HJH9174485.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004484;product=hypothetical protein;protein_id=HJH9174485.1;transl_table=11 DALFDA020000039.1 tpg gene 33189 33563 . - . ID=gene-O5C65_004485;Name=O5C65_004485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004485 DALFDA020000039.1 GeneMarkS-2+ CDS 33189 33563 . - 0 ID=cds-HJH9174486.1;Parent=gene-O5C65_004485;Dbxref=NCBI_GP:HJH9174486.1;Name=HJH9174486.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004485;product=hypothetical protein;protein_id=HJH9174486.1;transl_table=11 DALFDA020000039.1 tpg gene 33556 33876 . - . ID=gene-O5C65_004486;Name=O5C65_004486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004486 DALFDA020000039.1 GeneMarkS-2+ CDS 33556 33876 . - 0 ID=cds-HJH9174487.1;Parent=gene-O5C65_004486;Dbxref=NCBI_GP:HJH9174487.1;Name=HJH9174487.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004486;product=hypothetical protein;protein_id=HJH9174487.1;transl_table=11 DALFDA020000039.1 tpg gene 33918 34322 . - . ID=gene-O5C65_004487;Name=O5C65_004487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004487 DALFDA020000039.1 Protein Homology CDS 33918 34322 . - 0 ID=cds-HJH9174488.1;Parent=gene-O5C65_004487;Dbxref=NCBI_GP:HJH9174488.1;Name=HJH9174488.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192921.1;locus_tag=O5C65_004487;product=helix-turn-helix domain-containing protein;protein_id=HJH9174488.1;transl_table=11 DALFDA020000039.1 tpg gene 34410 34640 . + . ID=gene-O5C65_004488;Name=O5C65_004488;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004488 DALFDA020000039.1 Protein Homology CDS 34410 34640 . + 0 ID=cds-HJH9174489.1;Parent=gene-O5C65_004488;Dbxref=NCBI_GP:HJH9174489.1;Name=HJH9174489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728351.1;locus_tag=O5C65_004488;product=Cro/CI family transcriptional regulator;protein_id=HJH9174489.1;transl_table=11 DALFDA020000039.1 tpg gene 34618 35100 . + . ID=gene-O5C65_004489;Name=O5C65_004489;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004489 DALFDA020000039.1 Protein Homology CDS 34618 35100 . + 0 ID=cds-HJH9174490.1;Parent=gene-O5C65_004489;Dbxref=NCBI_GP:HJH9174490.1;Name=HJH9174490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728352.1;locus_tag=O5C65_004489;product=toxin YdaT family protein;protein_id=HJH9174490.1;transl_table=11 DALFDA020000039.1 tpg gene 35093 35947 . + . ID=gene-O5C65_004490;Name=O5C65_004490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004490 DALFDA020000039.1 Protein Homology CDS 35093 35947 . + 0 ID=cds-HJH9174491.1;Parent=gene-O5C65_004490;Dbxref=NCBI_GP:HJH9174491.1;Name=HJH9174491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002443619.1;locus_tag=O5C65_004490;product=replication protein;protein_id=HJH9174491.1;transl_table=11 DALFDA020000039.1 tpg gene 35970 36366 . + . ID=gene-O5C65_004491;Name=O5C65_004491;end_range=36366,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004491;partial=true DALFDA020000039.1 Protein Homology CDS 35970 36366 . + 0 ID=cds-HJH9174492.1;Parent=gene-O5C65_004491;Dbxref=NCBI_GP:HJH9174492.1;Name=HJH9174492.1;end_range=36366,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750230.1;locus_tag=O5C65_004491;partial=true;product=hypothetical protein;protein_id=HJH9174492.1;transl_table=11 ##sequence-region DALFDA020000040.1 1 36000 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000040.1 tpg region 1 36000 . + . ID=DALFDA020000040.1:1..36000;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000040.1 tpg gene 1 608 . - . ID=gene-O5C65_004492;Name=O5C65_004492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004492;partial=true;start_range=.,1 DALFDA020000040.1 Protein Homology CDS 1 608 . - 0 ID=cds-HJH9174493.1;Parent=gene-O5C65_004492;Dbxref=NCBI_GP:HJH9174493.1;Name=HJH9174493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459287.1;locus_tag=O5C65_004492;partial=true;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=HJH9174493.1;start_range=.,1;transl_table=11 DALFDA020000040.1 tpg gene 640 1089 . - . ID=gene-O5C65_004493;Name=O5C65_004493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004493 DALFDA020000040.1 Protein Homology CDS 640 1089 . - 0 ID=cds-HJH9174494.1;Parent=gene-O5C65_004493;Dbxref=NCBI_GP:HJH9174494.1;Name=HJH9174494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000275733.1;locus_tag=O5C65_004493;product=hypothetical protein;protein_id=HJH9174494.1;transl_table=11 DALFDA020000040.1 tpg gene 1103 1804 . - . ID=gene-O5C65_004494;Name=O5C65_004494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004494 DALFDA020000040.1 Protein Homology CDS 1103 1804 . - 0 ID=cds-HJH9174495.1;Parent=gene-O5C65_004494;Dbxref=NCBI_GP:HJH9174495.1;Name=HJH9174495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043958.1;locus_tag=O5C65_004494;product=hypothetical protein;protein_id=HJH9174495.1;transl_table=11 DALFDA020000040.1 tpg pseudogene 1815 1922 . - . ID=gene-O5C65_004495;Name=O5C65_004495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004495;pseudo=true DALFDA020000040.1 Protein Homology CDS 1815 1922 . - 0 ID=cds-O5C65_004495;Parent=gene-O5C65_004495;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254128.1;locus_tag=O5C65_004495;product=TagF domain-containing protein;pseudo=true;transl_table=11 DALFDA020000040.1 tpg gene 1931 2392 . - . ID=gene-O5C65_004496;Name=O5C65_004496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004496 DALFDA020000040.1 Protein Homology CDS 1931 2392 . - 0 ID=cds-HJH9174496.1;Parent=gene-O5C65_004496;Dbxref=NCBI_GP:HJH9174496.1;Name=HJH9174496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001670388.1;locus_tag=O5C65_004496;product=hypothetical protein;protein_id=HJH9174496.1;transl_table=11 DALFDA020000040.1 tpg pseudogene 2377 2846 . - . ID=gene-O5C65_004497;Name=O5C65_004497;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004497;pseudo=true DALFDA020000040.1 Protein Homology CDS 2377 2846 . - 0 ID=cds-O5C65_004497;Parent=gene-O5C65_004497;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528842.1;locus_tag=O5C65_004497;product=glucosaminidase domain-containing protein;pseudo=true;transl_table=11 DALFDA020000040.1 tpg gene 2950 3423 . - . ID=gene-O5C65_004498;Name=O5C65_004498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004498 DALFDA020000040.1 Protein Homology CDS 2950 3423 . - 0 ID=cds-HJH9174497.1;Parent=gene-O5C65_004498;Dbxref=NCBI_GP:HJH9174497.1;Name=HJH9174497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506348.1;locus_tag=O5C65_004498;product=hypothetical protein;protein_id=HJH9174497.1;transl_table=11 DALFDA020000040.1 tpg gene 3408 3878 . - . ID=gene-O5C65_004499;Name=O5C65_004499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004499 DALFDA020000040.1 Protein Homology CDS 3408 3878 . - 0 ID=cds-HJH9174498.1;Parent=gene-O5C65_004499;Dbxref=NCBI_GP:HJH9174498.1;Name=HJH9174498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000501515.1;locus_tag=O5C65_004499;product=glucosaminidase domain-containing protein;protein_id=HJH9174498.1;transl_table=11 DALFDA020000040.1 tpg gene 3921 4688 . - . ID=gene-O5C65_004500;Name=O5C65_004500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004500 DALFDA020000040.1 Protein Homology CDS 3921 4688 . - 0 ID=cds-HJH9174499.1;Parent=gene-O5C65_004500;Dbxref=NCBI_GP:HJH9174499.1;Name=HJH9174499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254119.1;locus_tag=O5C65_004500;product=TagF domain-containing protein;protein_id=HJH9174499.1;transl_table=11 DALFDA020000040.1 tpg gene 4688 8557 . - . ID=gene-O5C65_004501;Name=icmF;gbkey=Gene;gene=icmF;gene_biotype=protein_coding;locus_tag=O5C65_004501 DALFDA020000040.1 Protein Homology CDS 4688 8557 . - 0 ID=cds-HJH9174500.1;Parent=gene-O5C65_004501;Dbxref=NCBI_GP:HJH9174500.1;Name=HJH9174500.1;gbkey=CDS;gene=icmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459283.1;locus_tag=O5C65_004501;product=Type VI secretion protein IcmF;protein_id=HJH9174500.1;transl_table=11 DALFDA020000040.1 tpg gene 8591 9022 . - . ID=gene-O5C65_004502;Name=sciR;gbkey=Gene;gene=sciR;gene_biotype=protein_coding;locus_tag=O5C65_004502 DALFDA020000040.1 Protein Homology CDS 8591 9022 . - 0 ID=cds-HJH9174501.1;Parent=gene-O5C65_004502;Dbxref=NCBI_GP:HJH9174501.1;Name=HJH9174501.1;gbkey=CDS;gene=sciR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459282.1;locus_tag=O5C65_004502;product=Shiga-like toxin A subunit SciR;protein_id=HJH9174501.1;transl_table=11 DALFDA020000040.1 tpg gene 9224 9997 . - . ID=gene-O5C65_004503;Name=O5C65_004503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004503 DALFDA020000040.1 Protein Homology CDS 9224 9997 . - 0 ID=cds-HJH9174502.1;Parent=gene-O5C65_004503;Dbxref=NCBI_GP:HJH9174502.1;Name=HJH9174502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459281.1;locus_tag=O5C65_004503;product=Rap1a/Tai family immunity protein;protein_id=HJH9174502.1;transl_table=11 DALFDA020000040.1 tpg gene 10002 11306 . - . ID=gene-O5C65_004504;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=O5C65_004504 DALFDA020000040.1 Protein Homology CDS 10002 11306 . - 0 ID=cds-HJH9174503.1;Parent=gene-O5C65_004504;Dbxref=NCBI_GP:HJH9174503.1;Name=HJH9174503.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssL;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459280.1;locus_tag=O5C65_004504;product=type VI secretion system protein TssL%2C long form;protein_id=HJH9174503.1;transl_table=11 DALFDA020000040.1 tpg gene 11303 12646 . - . ID=gene-O5C65_004505;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=O5C65_004505 DALFDA020000040.1 Protein Homology CDS 11303 12646 . - 0 ID=cds-HJH9174504.1;Parent=gene-O5C65_004505;Dbxref=NCBI_GP:HJH9174504.1;Name=HJH9174504.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459279.1;locus_tag=O5C65_004505;product=type VI secretion system baseplate subunit TssK;protein_id=HJH9174504.1;transl_table=11 DALFDA020000040.1 tpg gene 12650 13186 . - . ID=gene-O5C65_004506;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=O5C65_004506 DALFDA020000040.1 Protein Homology CDS 12650 13186 . - 0 ID=cds-HJH9174505.1;Parent=gene-O5C65_004506;Dbxref=NCBI_GP:HJH9174505.1;Name=HJH9174505.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=O5C65_004506;product=type VI secretion system lipoprotein TssJ;protein_id=HJH9174505.1;transl_table=11 DALFDA020000040.1 tpg gene 13253 13738 . - . ID=gene-O5C65_004507;Name=O5C65_004507;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004507 DALFDA020000040.1 Protein Homology CDS 13253 13738 . - 0 ID=cds-HJH9174506.1;Parent=gene-O5C65_004507;Dbxref=NCBI_GP:HJH9174506.1;Name=HJH9174506.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459274.1;locus_tag=O5C65_004507;product=Hcp family type VI secretion system effector;protein_id=HJH9174506.1;transl_table=11 DALFDA020000040.1 tpg gene 13990 14436 . - . ID=gene-O5C65_004508;Name=O5C65_004508;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004508 DALFDA020000040.1 Protein Homology CDS 13990 14436 . - 0 ID=cds-HJH9174507.1;Parent=gene-O5C65_004508;Dbxref=NCBI_GP:HJH9174507.1;Name=HJH9174507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535435.1;locus_tag=O5C65_004508;product=STY0301 family protein;protein_id=HJH9174507.1;transl_table=11 DALFDA020000040.1 tpg gene 14449 14835 . - . ID=gene-O5C65_004509;Name=O5C65_004509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004509 DALFDA020000040.1 Protein Homology CDS 14449 14835 . - 0 ID=cds-HJH9174508.1;Parent=gene-O5C65_004509;Dbxref=NCBI_GP:HJH9174508.1;Name=HJH9174508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000323515.1;locus_tag=O5C65_004509;product=BPSL0067 family protein;protein_id=HJH9174508.1;transl_table=11 DALFDA020000040.1 tpg gene 14900 16408 . - . ID=gene-O5C65_004510;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=O5C65_004510 DALFDA020000040.1 Protein Homology CDS 14900 16408 . - 0 ID=cds-HJH9174509.1;Parent=gene-O5C65_004510;Dbxref=NCBI_GP:HJH9174509.1;Name=HJH9174509.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459271.1;locus_tag=O5C65_004510;product=type VI secretion system contractile sheath large subunit;protein_id=HJH9174509.1;transl_table=11 DALFDA020000040.1 tpg gene 16432 16974 . - . ID=gene-O5C65_004511;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=O5C65_004511 DALFDA020000040.1 Protein Homology CDS 16432 16974 . - 0 ID=cds-HJH9174510.1;Parent=gene-O5C65_004511;Dbxref=NCBI_GP:HJH9174510.1;Name=HJH9174510.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459270.1;locus_tag=O5C65_004511;product=type VI secretion system contractile sheath small subunit;protein_id=HJH9174510.1;transl_table=11 DALFDA020000040.1 tpg gene 17074 19713 . - . ID=gene-O5C65_004512;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=O5C65_004512 DALFDA020000040.1 Protein Homology CDS 17074 19713 . - 0 ID=cds-HJH9174511.1;Parent=gene-O5C65_004512;Dbxref=NCBI_GP:HJH9174511.1;Name=HJH9174511.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459269.1;locus_tag=O5C65_004512;product=type VI secretion system ATPase TssH;protein_id=HJH9174511.1;transl_table=11 DALFDA020000040.1 tpg gene 20081 20983 . + . ID=gene-O5C65_004513;Name=tagK;gbkey=Gene;gene=tagK;gene_biotype=protein_coding;locus_tag=O5C65_004513 DALFDA020000040.1 Protein Homology CDS 20081 20983 . + 0 ID=cds-HJH9174512.1;Parent=gene-O5C65_004513;Dbxref=NCBI_GP:HJH9174512.1;Name=HJH9174512.1;gbkey=CDS;gene=tagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459268.1;locus_tag=O5C65_004513;product=type VI secretion system-associated protein TagK;protein_id=HJH9174512.1;transl_table=11 DALFDA020000040.1 tpg gene 20970 21794 . + . ID=gene-O5C65_004514;Name=O5C65_004514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004514 DALFDA020000040.1 Protein Homology CDS 20970 21794 . + 0 ID=cds-HJH9174513.1;Parent=gene-O5C65_004514;Dbxref=NCBI_GP:HJH9174513.1;Name=HJH9174513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459267.1;locus_tag=O5C65_004514;product=type VI secretion system accessory protein TagJ;protein_id=HJH9174513.1;transl_table=11 DALFDA020000040.1 tpg gene 21791 22285 . + . ID=gene-O5C65_004515;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=O5C65_004515 DALFDA020000040.1 Protein Homology CDS 21791 22285 . + 0 ID=cds-HJH9174514.1;Parent=gene-O5C65_004515;Dbxref=NCBI_GP:HJH9174514.1;Name=HJH9174514.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459266.1;locus_tag=O5C65_004515;product=type VI secretion system baseplate subunit TssE;protein_id=HJH9174514.1;transl_table=11 DALFDA020000040.1 tpg gene 22301 24184 . + . ID=gene-O5C65_004516;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=O5C65_004516 DALFDA020000040.1 Protein Homology CDS 22301 24184 . + 0 ID=cds-HJH9174515.1;Parent=gene-O5C65_004516;Dbxref=NCBI_GP:HJH9174515.1;Name=HJH9174515.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459265.1;locus_tag=O5C65_004516;product=type VI secretion system baseplate subunit TssF;protein_id=HJH9174515.1;transl_table=11 DALFDA020000040.1 tpg gene 24181 25176 . + . ID=gene-O5C65_004517;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=O5C65_004517 DALFDA020000040.1 Protein Homology CDS 24181 25176 . + 0 ID=cds-HJH9174516.1;Parent=gene-O5C65_004517;Dbxref=NCBI_GP:HJH9174516.1;Name=HJH9174516.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459264.1;locus_tag=O5C65_004517;product=type VI secretion system baseplate subunit TssG;protein_id=HJH9174516.1;transl_table=11 DALFDA020000040.1 tpg gene 25187 26242 . + . ID=gene-O5C65_004518;Name=O5C65_004518;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004518 DALFDA020000040.1 Protein Homology CDS 25187 26242 . + 0 ID=cds-HJH9174517.1;Parent=gene-O5C65_004518;Dbxref=NCBI_GP:HJH9174517.1;Name=HJH9174517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459263.1;locus_tag=O5C65_004518;product=ImpA family type VI secretion system protein;protein_id=HJH9174517.1;transl_table=11 DALFDA020000040.1 tpg gene 26563 26639 . - . ID=gene-O5C65_004519;Name=O5C65_004519;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_004519 DALFDA020000040.1 tRNAscan-SE tRNA 26563 26639 . - . ID=rna-O5C65_004519;Parent=gene-O5C65_004519;anticodon=(pos:complement(26603..26605));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004519;product=tRNA-Asp DALFDA020000040.1 tRNAscan-SE exon 26563 26639 . - . ID=exon-O5C65_004519-1;Parent=rna-O5C65_004519;anticodon=(pos:complement(26603..26605));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004519;product=tRNA-Asp DALFDA020000040.1 tpg gene 26773 27504 . - . ID=gene-O5C65_004520;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=O5C65_004520 DALFDA020000040.1 Protein Homology CDS 26773 27504 . - 0 ID=cds-HJH9174518.1;Parent=gene-O5C65_004520;Dbxref=NCBI_GP:HJH9174518.1;Name=HJH9174518.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459262.1;locus_tag=O5C65_004520;product=DNA polymerase III subunit epsilon;protein_id=HJH9174518.1;transl_table=11 DALFDA020000040.1 tpg gene 27568 28035 . + . ID=gene-O5C65_004521;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=O5C65_004521 DALFDA020000040.1 Protein Homology CDS 27568 28035 . + 0 ID=cds-HJH9174519.1;Parent=gene-O5C65_004521;Dbxref=NCBI_GP:HJH9174519.1;Name=HJH9174519.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459261.1;locus_tag=O5C65_004521;product=ribonuclease HI;protein_id=HJH9174519.1;transl_table=11 DALFDA020000040.1 tpg gene 28032 28754 . - . ID=gene-O5C65_004522;Name=O5C65_004522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004522 DALFDA020000040.1 Protein Homology CDS 28032 28754 . - 0 ID=cds-HJH9174520.1;Parent=gene-O5C65_004522;Dbxref=NCBI_GP:HJH9174520.1;Name=HJH9174520.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459260.1;locus_tag=O5C65_004522;product=class I SAM-dependent methyltransferase;protein_id=HJH9174520.1;transl_table=11 DALFDA020000040.1 tpg gene 28789 29544 . + . ID=gene-O5C65_004523;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=O5C65_004523 DALFDA020000040.1 Protein Homology CDS 28789 29544 . + 0 ID=cds-HJH9174521.1;Parent=gene-O5C65_004523;Dbxref=NCBI_GP:HJH9174521.1;Name=HJH9174521.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459259.1;locus_tag=O5C65_004523;product=hydroxyacylglutathione hydrolase;protein_id=HJH9174521.1;transl_table=11 DALFDA020000040.1 tpg gene 29616 30983 . + . ID=gene-O5C65_004524;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=O5C65_004524 DALFDA020000040.1 Protein Homology CDS 29616 30983 . + 0 ID=cds-HJH9174522.1;Parent=gene-O5C65_004524;Dbxref=NCBI_GP:HJH9174522.1;Name=HJH9174522.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459258.1;locus_tag=O5C65_004524;product=murein transglycosylase D;protein_id=HJH9174522.1;transl_table=11 DALFDA020000040.1 tpg gene 31039 31809 . - . ID=gene-O5C65_004525;Name=O5C65_004525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004525 DALFDA020000040.1 Protein Homology CDS 31039 31809 . - 0 ID=cds-HJH9174523.1;Parent=gene-O5C65_004525;Dbxref=NCBI_GP:HJH9174523.1;Name=HJH9174523.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459257.1;locus_tag=O5C65_004525;product=class I SAM-dependent methyltransferase;protein_id=HJH9174523.1;transl_table=11 DALFDA020000040.1 tpg gene 31887 32687 . - . ID=gene-O5C65_004526;Name=O5C65_004526;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004526 DALFDA020000040.1 Protein Homology CDS 31887 32687 . - 0 ID=cds-HJH9174524.1;Parent=gene-O5C65_004526;Dbxref=NCBI_GP:HJH9174524.1;Name=HJH9174524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=O5C65_004526;product=endonuclease/exonuclease/phosphatase family protein;protein_id=HJH9174524.1;transl_table=11 DALFDA020000040.1 tpg gene 32819 33994 . - . ID=gene-O5C65_004527;Name=O5C65_004527;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004527 DALFDA020000040.1 Protein Homology CDS 32819 33994 . - 0 ID=cds-HJH9174525.1;Parent=gene-O5C65_004527;Dbxref=NCBI_GP:HJH9174525.1;Name=HJH9174525.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459255.1;locus_tag=O5C65_004527;product=MFS transporter;protein_id=HJH9174525.1;transl_table=11 DALFDA020000040.1 tpg gene 34099 35013 . + . ID=gene-O5C65_004528;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=O5C65_004528 DALFDA020000040.1 Protein Homology CDS 34099 35013 . + 0 ID=cds-HJH9174526.1;Parent=gene-O5C65_004528;Dbxref=NCBI_GP:HJH9174526.1;Name=HJH9174526.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459254.1;locus_tag=O5C65_004528;product=DNA-binding transcriptional regulator YafC;protein_id=HJH9174526.1;transl_table=11 DALFDA020000040.1 tpg gene 35035 35838 . - . ID=gene-O5C65_004529;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=O5C65_004529 DALFDA020000040.1 Protein Homology CDS 35035 35838 . - 0 ID=cds-HJH9174527.1;Parent=gene-O5C65_004529;Dbxref=NCBI_GP:HJH9174527.1;Name=HJH9174527.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459253.1;locus_tag=O5C65_004529;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=HJH9174527.1;transl_table=11 ##sequence-region DALFDA020000041.1 1 32934 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000041.1 tpg region 1 32934 . + . ID=DALFDA020000041.1:1..32934;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000041.1 tpg gene 1 268 . - . ID=gene-O5C65_004530;Name=O5C65_004530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004530;partial=true;start_range=.,1 DALFDA020000041.1 Protein Homology CDS 1 268 . - 0 ID=cds-HJH9174528.1;Parent=gene-O5C65_004530;Dbxref=NCBI_GP:HJH9174528.1;Name=HJH9174528.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015437.6;locus_tag=O5C65_004530;partial=true;product=autoinducer binding domain-containing protein;protein_id=HJH9174528.1;start_range=.,1;transl_table=11 DALFDA020000041.1 tpg gene 580 1494 . + . ID=gene-O5C65_004531;Name=O5C65_004531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004531 DALFDA020000041.1 Protein Homology CDS 580 1494 . + 0 ID=cds-HJH9174529.1;Parent=gene-O5C65_004531;Dbxref=NCBI_GP:HJH9174529.1;Name=HJH9174529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016157213.1;locus_tag=O5C65_004531;product=hypothetical protein;protein_id=HJH9174529.1;transl_table=11 DALFDA020000041.1 tpg gene 1624 1815 . + . ID=gene-O5C65_004532;Name=O5C65_004532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004532 DALFDA020000041.1 Protein Homology CDS 1624 1815 . + 0 ID=cds-HJH9174530.1;Parent=gene-O5C65_004532;Dbxref=NCBI_GP:HJH9174530.1;Name=HJH9174530.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012541174.1;locus_tag=O5C65_004532;product=AlpA family transcriptional regulator;protein_id=HJH9174530.1;transl_table=11 DALFDA020000041.1 tpg gene 1865 2446 . + . ID=gene-O5C65_004533;Name=O5C65_004533;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004533 DALFDA020000041.1 Protein Homology CDS 1865 2446 . + 0 ID=cds-HJH9174531.1;Parent=gene-O5C65_004533;Dbxref=NCBI_GP:HJH9174531.1;Name=HJH9174531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012769227.1;locus_tag=O5C65_004533;product=DUF2857 domain-containing protein;protein_id=HJH9174531.1;transl_table=11 DALFDA020000041.1 tpg gene 2439 2654 . + . ID=gene-O5C65_004534;Name=O5C65_004534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004534 DALFDA020000041.1 Protein Homology CDS 2439 2654 . + 0 ID=cds-HJH9174532.1;Parent=gene-O5C65_004534;Dbxref=NCBI_GP:HJH9174532.1;Name=HJH9174532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015696811.1;locus_tag=O5C65_004534;product=TraR/DksA family transcriptional regulator;protein_id=HJH9174532.1;transl_table=11 DALFDA020000041.1 tpg gene 2871 3092 . + . ID=gene-O5C65_004535;Name=O5C65_004535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004535 DALFDA020000041.1 Protein Homology CDS 2871 3092 . + 0 ID=cds-HJH9174533.1;Parent=gene-O5C65_004535;Dbxref=NCBI_GP:HJH9174533.1;Name=HJH9174533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229955.1;locus_tag=O5C65_004535;product=hypothetical protein;protein_id=HJH9174533.1;transl_table=11 DALFDA020000041.1 tpg gene 3108 3800 . + . ID=gene-O5C65_004536;Name=O5C65_004536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004536 DALFDA020000041.1 Protein Homology CDS 3108 3800 . + 0 ID=cds-HJH9174534.1;Parent=gene-O5C65_004536;Dbxref=NCBI_GP:HJH9174534.1;Name=HJH9174534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015874990.1;locus_tag=O5C65_004536;product=lytic transglycosylase domain-containing protein;protein_id=HJH9174534.1;transl_table=11 DALFDA020000041.1 tpg gene 3797 4087 . + . ID=gene-O5C65_004537;Name=O5C65_004537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004537 DALFDA020000041.1 Protein Homology CDS 3797 4087 . + 0 ID=cds-HJH9174535.1;Parent=gene-O5C65_004537;Dbxref=NCBI_GP:HJH9174535.1;Name=HJH9174535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012885319.1;locus_tag=O5C65_004537;product=TrbC/VirB2 family protein;protein_id=HJH9174535.1;transl_table=11 DALFDA020000041.1 tpg gene 4100 6838 . + . ID=gene-O5C65_004538;Name=O5C65_004538;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004538 DALFDA020000041.1 Protein Homology CDS 4100 6838 . + 0 ID=cds-HJH9174536.1;Parent=gene-O5C65_004538;Dbxref=NCBI_GP:HJH9174536.1;Name=HJH9174536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227778.1;locus_tag=O5C65_004538;product=VirB3 family type IV secretion system protein;protein_id=HJH9174536.1;transl_table=11 DALFDA020000041.1 tpg gene 6858 7565 . + . ID=gene-O5C65_004539;Name=O5C65_004539;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004539 DALFDA020000041.1 Protein Homology CDS 6858 7565 . + 0 ID=cds-HJH9174537.1;Parent=gene-O5C65_004539;Dbxref=NCBI_GP:HJH9174537.1;Name=HJH9174537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010617328.1;locus_tag=O5C65_004539;product=type IV secretion system protein;protein_id=HJH9174537.1;transl_table=11 DALFDA020000041.1 tpg gene 7577 7801 . + . ID=gene-O5C65_004540;Name=O5C65_004540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004540 DALFDA020000041.1 Protein Homology CDS 7577 7801 . + 0 ID=cds-HJH9174538.1;Parent=gene-O5C65_004540;Dbxref=NCBI_GP:HJH9174538.1;Name=HJH9174538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000720509.1;locus_tag=O5C65_004540;product=EexN family lipoprotein;protein_id=HJH9174538.1;transl_table=11 DALFDA020000041.1 tpg gene 7813 8889 . + . ID=gene-O5C65_004541;Name=O5C65_004541;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004541 DALFDA020000041.1 Protein Homology CDS 7813 8889 . + 0 ID=cds-HJH9174539.1;Parent=gene-O5C65_004541;Dbxref=NCBI_GP:HJH9174539.1;Name=HJH9174539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012815871.1;locus_tag=O5C65_004541;product=type IV secretion system protein;protein_id=HJH9174539.1;transl_table=11 DALFDA020000041.1 tpg gene 9112 9795 . + . ID=gene-O5C65_004542;Name=O5C65_004542;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004542 DALFDA020000041.1 Protein Homology CDS 9112 9795 . + 0 ID=cds-HJH9174540.1;Parent=gene-O5C65_004542;Dbxref=NCBI_GP:HJH9174540.1;Name=HJH9174540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227782.1;locus_tag=O5C65_004542;product=type IV secretion system protein;protein_id=HJH9174540.1;transl_table=11 DALFDA020000041.1 tpg gene 9795 10133 . + . ID=gene-O5C65_004543;Name=O5C65_004543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004543 DALFDA020000041.1 GeneMarkS-2+ CDS 9795 10133 . + 0 ID=cds-HJH9174541.1;Parent=gene-O5C65_004543;Dbxref=NCBI_GP:HJH9174541.1;Name=HJH9174541.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004543;product=hypothetical protein;protein_id=HJH9174541.1;transl_table=11 DALFDA020000041.1 tpg gene 10126 11031 . + . ID=gene-O5C65_004544;Name=virB9;gbkey=Gene;gene=virB9;gene_biotype=protein_coding;locus_tag=O5C65_004544 DALFDA020000041.1 Protein Homology CDS 10126 11031 . + 0 ID=cds-HJH9174542.1;Parent=gene-O5C65_004544;Dbxref=NCBI_GP:HJH9174542.1;Name=HJH9174542.1;gbkey=CDS;gene=virB9;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044151.1;locus_tag=O5C65_004544;product=P-type conjugative transfer protein VirB9;protein_id=HJH9174542.1;transl_table=11 DALFDA020000041.1 tpg gene 11079 12347 . + . ID=gene-O5C65_004545;Name=virB10;gbkey=Gene;gene=virB10;gene_biotype=protein_coding;locus_tag=O5C65_004545 DALFDA020000041.1 Protein Homology CDS 11079 12347 . + 0 ID=cds-HJH9174543.1;Parent=gene-O5C65_004545;Dbxref=NCBI_GP:HJH9174543.1;Name=HJH9174543.1;gbkey=CDS;gene=virB10;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227784.1;locus_tag=O5C65_004545;product=VirB10/TraB/TrbI family type IV secretion system protein;protein_id=HJH9174543.1;transl_table=11 DALFDA020000041.1 tpg gene 12337 13362 . + . ID=gene-O5C65_004546;Name=virB11;gbkey=Gene;gene=virB11;gene_biotype=protein_coding;locus_tag=O5C65_004546 DALFDA020000041.1 Protein Homology CDS 12337 13362 . + 0 ID=cds-HJH9174544.1;Parent=gene-O5C65_004546;Dbxref=NCBI_GP:HJH9174544.1;Name=HJH9174544.1;Ontology_term=GO:0044097,GO:0043684;gbkey=CDS;gene=virB11;go_component=type IV secretion system complex|0043684||IEA;go_process=secretion by the type IV secretion system|0044097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227785.1;locus_tag=O5C65_004546;product=P-type DNA transfer ATPase VirB11;protein_id=HJH9174544.1;transl_table=11 DALFDA020000041.1 tpg gene 13359 13757 . + . ID=gene-O5C65_004547;Name=O5C65_004547;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004547 DALFDA020000041.1 Protein Homology CDS 13359 13757 . + 0 ID=cds-HJH9174545.1;Parent=gene-O5C65_004547;Dbxref=NCBI_GP:HJH9174545.1;Name=HJH9174545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592251.1;locus_tag=O5C65_004547;product=cag pathogenicity island Cag12 family protein;protein_id=HJH9174545.1;transl_table=11 DALFDA020000041.1 tpg gene 13793 14098 . + . ID=gene-O5C65_004548;Name=O5C65_004548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004548 DALFDA020000041.1 Protein Homology CDS 13793 14098 . + 0 ID=cds-HJH9174546.1;Parent=gene-O5C65_004548;Dbxref=NCBI_GP:HJH9174546.1;Name=HJH9174546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754361.1;locus_tag=O5C65_004548;product=conjugal transfer protein;protein_id=HJH9174546.1;transl_table=11 DALFDA020000041.1 tpg gene 14132 14437 . + . ID=gene-O5C65_004549;Name=O5C65_004549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004549 DALFDA020000041.1 Protein Homology CDS 14132 14437 . + 0 ID=cds-HJH9174547.1;Parent=gene-O5C65_004549;Dbxref=NCBI_GP:HJH9174547.1;Name=HJH9174547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172016.1;locus_tag=O5C65_004549;product=dpoa decarboxylase;protein_id=HJH9174547.1;transl_table=11 DALFDA020000041.1 tpg gene 15217 16953 . + . ID=gene-O5C65_004550;Name=O5C65_004550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004550 DALFDA020000041.1 Protein Homology CDS 15217 16953 . + 0 ID=cds-HJH9174548.1;Parent=gene-O5C65_004550;Dbxref=NCBI_GP:HJH9174548.1;Name=HJH9174548.1;Ontology_term=GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017346477.1;locus_tag=O5C65_004550;product=type IV secretory system conjugative DNA transfer family protein;protein_id=HJH9174548.1;transl_table=11 DALFDA020000041.1 tpg gene 16962 17714 . + . ID=gene-O5C65_004551;Name=mobC;gbkey=Gene;gene=mobC;gene_biotype=protein_coding;locus_tag=O5C65_004551 DALFDA020000041.1 Protein Homology CDS 16962 17714 . + 0 ID=cds-HJH9174549.1;Parent=gene-O5C65_004551;Dbxref=NCBI_GP:HJH9174549.1;Name=HJH9174549.1;gbkey=CDS;gene=mobC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653126.1;locus_tag=O5C65_004551;product=MobC family replication-relaxation protein;protein_id=HJH9174549.1;transl_table=11 DALFDA020000041.1 tpg gene 18658 19200 . - . ID=gene-O5C65_004552;Name=O5C65_004552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004552 DALFDA020000041.1 Protein Homology CDS 18658 19200 . - 0 ID=cds-HJH9174550.1;Parent=gene-O5C65_004552;Dbxref=NCBI_GP:HJH9174550.1;Name=HJH9174550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373448.1;locus_tag=O5C65_004552;product=inclusion body family protein;protein_id=HJH9174550.1;transl_table=11 DALFDA020000041.1 tpg gene 19342 19617 . - . ID=gene-O5C65_004553;Name=O5C65_004553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004553 DALFDA020000041.1 GeneMarkS-2+ CDS 19342 19617 . - 0 ID=cds-HJH9174551.1;Parent=gene-O5C65_004553;Dbxref=NCBI_GP:HJH9174551.1;Name=HJH9174551.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004553;product=hypothetical protein;protein_id=HJH9174551.1;transl_table=11 DALFDA020000041.1 tpg gene 19685 20161 . - . ID=gene-O5C65_004554;Name=O5C65_004554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004554 DALFDA020000041.1 GeneMarkS-2+ CDS 19685 20161 . - 0 ID=cds-HJH9174552.1;Parent=gene-O5C65_004554;Dbxref=NCBI_GP:HJH9174552.1;Name=HJH9174552.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004554;product=hypothetical protein;protein_id=HJH9174552.1;transl_table=11 DALFDA020000041.1 tpg gene 20381 22882 . - . ID=gene-O5C65_004555;Name=O5C65_004555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004555 DALFDA020000041.1 Protein Homology CDS 20381 22882 . - 0 ID=cds-HJH9174553.1;Parent=gene-O5C65_004555;Dbxref=NCBI_GP:HJH9174553.1;Name=HJH9174553.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750512.1;locus_tag=O5C65_004555;product=fimbria/pilus outer membrane usher protein;protein_id=HJH9174553.1;transl_table=11 DALFDA020000041.1 tpg gene 23037 23771 . - . ID=gene-O5C65_004556;Name=O5C65_004556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004556 DALFDA020000041.1 Protein Homology CDS 23037 23771 . - 0 ID=cds-HJH9174554.1;Parent=gene-O5C65_004556;Dbxref=NCBI_GP:HJH9174554.1;Name=HJH9174554.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: protein motif:HMM:NF012565.6;locus_tag=O5C65_004556;product=fimbrial biogenesis chaperone;protein_id=HJH9174554.1;transl_table=11 DALFDA020000041.1 tpg gene 24977 27082 . - . ID=gene-O5C65_004557;Name=O5C65_004557;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004557 DALFDA020000041.1 Protein Homology CDS 24977 27082 . - 0 ID=cds-HJH9174555.1;Parent=gene-O5C65_004557;Dbxref=NCBI_GP:HJH9174555.1;Name=HJH9174555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012848104.1;locus_tag=O5C65_004557;product=exo-alpha-sialidase;protein_id=HJH9174555.1;transl_table=11 DALFDA020000041.1 tpg gene 27182 28291 . - . ID=gene-O5C65_004558;Name=O5C65_004558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004558 DALFDA020000041.1 Protein Homology CDS 27182 28291 . - 0 ID=cds-HJH9174556.1;Parent=gene-O5C65_004558;Dbxref=NCBI_GP:HJH9174556.1;Name=HJH9174556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044132.1;locus_tag=O5C65_004558;product=N-acetylneuraminate epimerase;protein_id=HJH9174556.1;transl_table=11 DALFDA020000041.1 tpg gene 28304 29023 . - . ID=gene-O5C65_004559;Name=O5C65_004559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004559 DALFDA020000041.1 Protein Homology CDS 28304 29023 . - 0 ID=cds-HJH9174557.1;Parent=gene-O5C65_004559;Dbxref=NCBI_GP:HJH9174557.1;Name=HJH9174557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000748140.1;locus_tag=O5C65_004559;product=oligogalacturonate-specific porin KdgM family protein;protein_id=HJH9174557.1;transl_table=11 DALFDA020000041.1 tpg gene 29148 30602 . - . ID=gene-O5C65_004560;Name=O5C65_004560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004560 DALFDA020000041.1 Protein Homology CDS 29148 30602 . - 0 ID=cds-HJH9174558.1;Parent=gene-O5C65_004560;Dbxref=NCBI_GP:HJH9174558.1;Name=HJH9174558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002949407.1;locus_tag=O5C65_004560;product=MFS transporter;protein_id=HJH9174558.1;transl_table=11 DALFDA020000041.1 tpg gene 31001 31612 . + . ID=gene-O5C65_004561;Name=O5C65_004561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004561 DALFDA020000041.1 Protein Homology CDS 31001 31612 . + 0 ID=cds-HJH9174559.1;Parent=gene-O5C65_004561;Dbxref=NCBI_GP:HJH9174559.1;Name=HJH9174559.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF013756.6;locus_tag=O5C65_004561;product=flavin reductase family protein;protein_id=HJH9174559.1;transl_table=11 DALFDA020000041.1 tpg gene 31754 32710 . - . ID=gene-O5C65_004562;Name=O5C65_004562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004562 DALFDA020000041.1 Protein Homology CDS 31754 32710 . - 0 ID=cds-HJH9174560.1;Parent=gene-O5C65_004562;Dbxref=NCBI_GP:HJH9174560.1;Name=HJH9174560.1;Ontology_term=GO:0003697,GO:0008237,GO:0008270;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227789.1;locus_tag=O5C65_004562;product=ArdC family protein;protein_id=HJH9174560.1;transl_table=11 ##sequence-region DALFDA020000042.1 1 32593 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000042.1 tpg region 1 32593 . + . ID=DALFDA020000042.1:1..32593;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000042.1 tpg gene 1 1792 . + . ID=gene-O5C65_004563;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=O5C65_004563;partial=true;start_range=.,1 DALFDA020000042.1 Protein Homology CDS 1 1792 . + 1 ID=cds-HJH9174561.1;Parent=gene-O5C65_004563;Dbxref=NCBI_GP:HJH9174561.1;Name=HJH9174561.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461409.1;locus_tag=O5C65_004563;partial=true;product=transketolase;protein_id=HJH9174561.1;start_range=.,1;transl_table=11 DALFDA020000042.1 tpg gene 1936 3246 . + . ID=gene-O5C65_004564;Name=O5C65_004564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004564 DALFDA020000042.1 Protein Homology CDS 1936 3246 . + 0 ID=cds-HJH9174562.1;Parent=gene-O5C65_004564;Dbxref=NCBI_GP:HJH9174562.1;Name=HJH9174562.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007885903.1;locus_tag=O5C65_004564;product=MFS transporter;protein_id=HJH9174562.1;transl_table=11 DALFDA020000042.1 tpg gene 3256 4293 . + . ID=gene-O5C65_004565;Name=O5C65_004565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004565 DALFDA020000042.1 Protein Homology CDS 3256 4293 . + 0 ID=cds-HJH9174563.1;Parent=gene-O5C65_004565;Dbxref=NCBI_GP:HJH9174563.1;Name=HJH9174563.1;Ontology_term=GO:0008615,GO:0042823,GO:0000287,GO:0008270,GO:0050570,GO:0050897,GO:0051287,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,zinc ion binding|0008270||IEA,4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA,cobalt ion binding|0050897||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904738.1;locus_tag=O5C65_004565;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=HJH9174563.1;transl_table=11 DALFDA020000042.1 tpg gene 4379 5671 . + . ID=gene-O5C65_004566;Name=O5C65_004566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004566 DALFDA020000042.1 Protein Homology CDS 4379 5671 . + 0 ID=cds-HJH9174564.1;Parent=gene-O5C65_004566;Dbxref=NCBI_GP:HJH9174564.1;Name=HJH9174564.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.6;locus_tag=O5C65_004566;product=MFS transporter;protein_id=HJH9174564.1;transl_table=11 DALFDA020000042.1 tpg gene 5653 6600 . + . ID=gene-O5C65_004567;Name=O5C65_004567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004567 DALFDA020000042.1 Protein Homology CDS 5653 6600 . + 0 ID=cds-HJH9174565.1;Parent=gene-O5C65_004567;Dbxref=NCBI_GP:HJH9174565.1;Name=HJH9174565.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007885906.1;locus_tag=O5C65_004567;product=amidohydrolase family protein;protein_id=HJH9174565.1;transl_table=11 DALFDA020000042.1 tpg gene 6597 7433 . + . ID=gene-O5C65_004568;Name=O5C65_004568;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004568 DALFDA020000042.1 Protein Homology CDS 6597 7433 . + 0 ID=cds-HJH9174566.1;Parent=gene-O5C65_004568;Dbxref=NCBI_GP:HJH9174566.1;Name=HJH9174566.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: protein motif:HMM:NF013429.6;locus_tag=O5C65_004568;product=sugar phosphate isomerase/epimerase family protein;protein_id=HJH9174566.1;transl_table=11 DALFDA020000042.1 tpg gene 7746 8585 . - . ID=gene-O5C65_004569;Name=O5C65_004569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004569 DALFDA020000042.1 Protein Homology CDS 7746 8585 . - 0 ID=cds-HJH9174567.1;Parent=gene-O5C65_004569;Dbxref=NCBI_GP:HJH9174567.1;Name=HJH9174567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006317665.1;locus_tag=O5C65_004569;product=hypothetical protein;protein_id=HJH9174567.1;transl_table=11 DALFDA020000042.1 tpg gene 8702 8908 . - . ID=gene-O5C65_004570;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=O5C65_004570 DALFDA020000042.1 Protein Homology CDS 8702 8908 . - 0 ID=cds-HJH9174568.1;Parent=gene-O5C65_004570;Dbxref=NCBI_GP:HJH9174568.1;Name=HJH9174568.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000838015.1;locus_tag=O5C65_004570;product=hemolysin expression modulator Hha;protein_id=HJH9174568.1;transl_table=11 DALFDA020000042.1 tpg gene 9031 9378 . - . ID=gene-O5C65_004571;Name=O5C65_004571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004571 DALFDA020000042.1 Protein Homology CDS 9031 9378 . - 0 ID=cds-HJH9174569.1;Parent=gene-O5C65_004571;Dbxref=NCBI_GP:HJH9174569.1;Name=HJH9174569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750853.1;locus_tag=O5C65_004571;product=hypothetical protein;protein_id=HJH9174569.1;transl_table=11 DALFDA020000042.1 tpg gene 9372 9728 . - . ID=gene-O5C65_004572;Name=O5C65_004572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004572 DALFDA020000042.1 Protein Homology CDS 9372 9728 . - 0 ID=cds-HJH9174570.1;Parent=gene-O5C65_004572;Dbxref=NCBI_GP:HJH9174570.1;Name=HJH9174570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750854.1;locus_tag=O5C65_004572;product=PerC family transcriptional regulator;protein_id=HJH9174570.1;transl_table=11 DALFDA020000042.1 tpg gene 9767 10111 . - . ID=gene-O5C65_004573;Name=O5C65_004573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004573 DALFDA020000042.1 Protein Homology CDS 9767 10111 . - 0 ID=cds-HJH9174571.1;Parent=gene-O5C65_004573;Dbxref=NCBI_GP:HJH9174571.1;Name=HJH9174571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000555104.1;locus_tag=O5C65_004573;product=hypothetical protein;protein_id=HJH9174571.1;transl_table=11 DALFDA020000042.1 tpg gene 10322 11137 . - . ID=gene-O5C65_004574;Name=O5C65_004574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004574 DALFDA020000042.1 Protein Homology CDS 10322 11137 . - 0 ID=cds-HJH9174572.1;Parent=gene-O5C65_004574;Dbxref=NCBI_GP:HJH9174572.1;Name=HJH9174572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750855.1;locus_tag=O5C65_004574;product=transcriptional regulator;protein_id=HJH9174572.1;transl_table=11 DALFDA020000042.1 tpg gene 11124 11627 . - . ID=gene-O5C65_004575;Name=O5C65_004575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004575 DALFDA020000042.1 Protein Homology CDS 11124 11627 . - 0 ID=cds-HJH9174573.1;Parent=gene-O5C65_004575;Dbxref=NCBI_GP:HJH9174573.1;Name=HJH9174573.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006777639.1;locus_tag=O5C65_004575;product=CaiF/GrlA family transcriptional regulator;protein_id=HJH9174573.1;transl_table=11 DALFDA020000042.1 tpg gene 11723 12784 . - . ID=gene-O5C65_004576;Name=O5C65_004576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004576 DALFDA020000042.1 Protein Homology CDS 11723 12784 . - 0 ID=cds-HJH9174574.1;Parent=gene-O5C65_004576;Dbxref=NCBI_GP:HJH9174574.1;Name=HJH9174574.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147761.1;locus_tag=O5C65_004576;product=fimbrial protein;protein_id=HJH9174574.1;transl_table=11 DALFDA020000042.1 tpg gene 12781 13524 . - . ID=gene-O5C65_004577;Name=stdC;gbkey=Gene;gene=stdC;gene_biotype=protein_coding;locus_tag=O5C65_004577 DALFDA020000042.1 Protein Homology CDS 12781 13524 . - 0 ID=cds-HJH9174575.1;Parent=gene-O5C65_004577;Dbxref=NCBI_GP:HJH9174575.1;Name=HJH9174575.1;gbkey=CDS;gene=stdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461944.1;locus_tag=O5C65_004577;product=fimbrial biogenesis chaperone StdC;protein_id=HJH9174575.1;transl_table=11 DALFDA020000042.1 tpg gene 13565 16054 . - . ID=gene-O5C65_004578;Name=stdB;gbkey=Gene;gene=stdB;gene_biotype=protein_coding;locus_tag=O5C65_004578 DALFDA020000042.1 Protein Homology CDS 13565 16054 . - 0 ID=cds-HJH9174576.1;Parent=gene-O5C65_004578;Dbxref=NCBI_GP:HJH9174576.1;Name=HJH9174576.1;gbkey=CDS;gene=stdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461945.1;locus_tag=O5C65_004578;product=fimbrial outer membrane usher protein StdB;protein_id=HJH9174576.1;transl_table=11 DALFDA020000042.1 tpg gene 16174 16767 . - . ID=gene-O5C65_004579;Name=O5C65_004579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004579 DALFDA020000042.1 Protein Homology CDS 16174 16767 . - 0 ID=cds-HJH9174577.1;Parent=gene-O5C65_004579;Dbxref=NCBI_GP:HJH9174577.1;Name=HJH9174577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001244636.1;locus_tag=O5C65_004579;product=fimbrial protein;protein_id=HJH9174577.1;transl_table=11 DALFDA020000042.1 tpg gene 17574 18692 . - . ID=gene-O5C65_004580;Name=O5C65_004580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004580 DALFDA020000042.1 Protein Homology CDS 17574 18692 . - 0 ID=cds-HJH9174578.1;Parent=gene-O5C65_004580;Dbxref=NCBI_GP:HJH9174578.1;Name=HJH9174578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687732.1;locus_tag=O5C65_004580;product=DUF4056 domain-containing protein;protein_id=HJH9174578.1;transl_table=11 DALFDA020000042.1 tpg gene 18701 19825 . - . ID=gene-O5C65_004581;Name=O5C65_004581;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004581 DALFDA020000042.1 Protein Homology CDS 18701 19825 . - 0 ID=cds-HJH9174579.1;Parent=gene-O5C65_004581;Dbxref=NCBI_GP:HJH9174579.1;Name=HJH9174579.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750412.1;locus_tag=O5C65_004581;product=BamA/TamA family outer membrane protein;protein_id=HJH9174579.1;transl_table=11 DALFDA020000042.1 tpg gene 19825 20832 . - . ID=gene-O5C65_004582;Name=O5C65_004582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004582 DALFDA020000042.1 Protein Homology CDS 19825 20832 . - 0 ID=cds-HJH9174580.1;Parent=gene-O5C65_004582;Dbxref=NCBI_GP:HJH9174580.1;Name=HJH9174580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528257.1;locus_tag=O5C65_004582;product=hypothetical protein;protein_id=HJH9174580.1;transl_table=11 DALFDA020000042.1 tpg gene 21263 21622 . - . ID=gene-O5C65_004583;Name=O5C65_004583;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004583 DALFDA020000042.1 GeneMarkS-2+ CDS 21263 21622 . - 0 ID=cds-HJH9174581.1;Parent=gene-O5C65_004583;Dbxref=NCBI_GP:HJH9174581.1;Name=HJH9174581.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004583;product=hypothetical protein;protein_id=HJH9174581.1;transl_table=11 DALFDA020000042.1 tpg gene 21623 21934 . - . ID=gene-O5C65_004584;Name=O5C65_004584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004584 DALFDA020000042.1 GeneMarkS-2+ CDS 21623 21934 . - 0 ID=cds-HJH9174582.1;Parent=gene-O5C65_004584;Dbxref=NCBI_GP:HJH9174582.1;Name=HJH9174582.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004584;product=hypothetical protein;protein_id=HJH9174582.1;transl_table=11 DALFDA020000042.1 tpg gene 21936 22457 . - . ID=gene-O5C65_004585;Name=O5C65_004585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004585 DALFDA020000042.1 GeneMarkS-2+ CDS 21936 22457 . - 0 ID=cds-HJH9174583.1;Parent=gene-O5C65_004585;Dbxref=NCBI_GP:HJH9174583.1;Name=HJH9174583.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004585;product=hypothetical protein;protein_id=HJH9174583.1;transl_table=11 DALFDA020000042.1 tpg gene 22613 22972 . - . ID=gene-O5C65_004586;Name=O5C65_004586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004586 DALFDA020000042.1 GeneMarkS-2+ CDS 22613 22972 . - 0 ID=cds-HJH9174584.1;Parent=gene-O5C65_004586;Dbxref=NCBI_GP:HJH9174584.1;Name=HJH9174584.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004586;product=hypothetical protein;protein_id=HJH9174584.1;transl_table=11 DALFDA020000042.1 tpg gene 23722 24090 . - . ID=gene-O5C65_004587;Name=O5C65_004587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004587 DALFDA020000042.1 Protein Homology CDS 23722 24090 . - 0 ID=cds-HJH9174585.1;Parent=gene-O5C65_004587;Dbxref=NCBI_GP:HJH9174585.1;Name=HJH9174585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750419.1;locus_tag=O5C65_004587;product=hypothetical protein;protein_id=HJH9174585.1;transl_table=11 DALFDA020000042.1 tpg gene 24531 24932 . - . ID=gene-O5C65_004588;Name=O5C65_004588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004588 DALFDA020000042.1 Protein Homology CDS 24531 24932 . - 0 ID=cds-HJH9174586.1;Parent=gene-O5C65_004588;Dbxref=NCBI_GP:HJH9174586.1;Name=HJH9174586.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018214.6;locus_tag=O5C65_004588;product=DUF1090 domain-containing protein;protein_id=HJH9174586.1;transl_table=11 DALFDA020000042.1 tpg gene 25451 26221 . - . ID=gene-O5C65_004589;Name=O5C65_004589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004589 DALFDA020000042.1 Protein Homology CDS 25451 26221 . - 0 ID=cds-HJH9174587.1;Parent=gene-O5C65_004589;Dbxref=NCBI_GP:HJH9174587.1;Name=HJH9174587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001547062.1;locus_tag=O5C65_004589;product=DUF3800 domain-containing protein;protein_id=HJH9174587.1;transl_table=11 DALFDA020000042.1 tpg gene 26502 27233 . - . ID=gene-O5C65_004590;Name=traT;gbkey=Gene;gene=traT;gene_biotype=protein_coding;locus_tag=O5C65_004590 DALFDA020000042.1 Protein Homology CDS 26502 27233 . - 0 ID=cds-HJH9174588.1;Parent=gene-O5C65_004590;Dbxref=NCBI_GP:HJH9174588.1;Name=HJH9174588.1;gbkey=CDS;gene=traT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490587.1;locus_tag=O5C65_004590;product=conjugal transfer complement resistance protein TraT;protein_id=HJH9174588.1;transl_table=11 DALFDA020000042.1 tpg pseudogene 27819 28460 . - . ID=gene-O5C65_004591;Name=tnpC;gbkey=Gene;gene=tnpC;gene_biotype=pseudogene;locus_tag=O5C65_004591;pseudo=true DALFDA020000042.1 Protein Homology CDS 27819 28460 . - 0 ID=cds-O5C65_004591;Parent=gene-O5C65_004591;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354984.1;locus_tag=O5C65_004591;product=IS66 family transposase;pseudo=true;transl_table=11 DALFDA020000042.1 tpg pseudogene 28493 29071 . + . ID=gene-O5C65_004592;Name=O5C65_004592;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004592;pseudo=true DALFDA020000042.1 Protein Homology CDS 28493 29071 . + 0 ID=cds-O5C65_004592;Parent=gene-O5C65_004592;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001179707.1;locus_tag=O5C65_004592;product=IS110 family transposase;pseudo=true;transl_table=11 DALFDA020000042.1 tpg pseudogene 29369 30357 . - . ID=gene-O5C65_004593;Name=O5C65_004593;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004593;pseudo=true DALFDA020000042.1 Protein Homology CDS 29369 30357 . - 0 ID=cds-O5C65_004593;Parent=gene-O5C65_004593;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_046881606.1;locus_tag=O5C65_004593;product=IS4 family transposase;pseudo=true;transl_table=11 DALFDA020000042.1 tpg pseudogene 30444 30587 . - . ID=gene-O5C65_004594;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=O5C65_004594;pseudo=true DALFDA020000042.1 Protein Homology CDS 30444 30587 . - 0 ID=cds-O5C65_004594;Parent=gene-O5C65_004594;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309368.2;locus_tag=O5C65_004594;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;transl_table=11 DALFDA020000042.1 tpg gene 30577 30888 . - . ID=gene-O5C65_004595;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=O5C65_004595 DALFDA020000042.1 Protein Homology CDS 30577 30888 . - 0 ID=cds-HJH9174589.1;Parent=gene-O5C65_004595;Dbxref=NCBI_GP:HJH9174589.1;Name=HJH9174589.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000042918.1;locus_tag=O5C65_004595;product=IS66 family insertion sequence element accessory protein TnpA;protein_id=HJH9174589.1;transl_table=11 DALFDA020000042.1 tpg gene 31008 31943 . - . ID=gene-O5C65_004596;Name=O5C65_004596;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004596 DALFDA020000042.1 GeneMarkS-2+ CDS 31008 31943 . - 0 ID=cds-HJH9174590.1;Parent=gene-O5C65_004596;Dbxref=NCBI_GP:HJH9174590.1;Name=HJH9174590.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004596;product=fimbrial protein;protein_id=HJH9174590.1;transl_table=11 DALFDA020000042.1 tpg gene 31976 32593 . - . ID=gene-O5C65_004597;Name=O5C65_004597;end_range=32593,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004597;partial=true DALFDA020000042.1 Protein Homology CDS 31976 32593 . - 0 ID=cds-HJH9174591.1;Parent=gene-O5C65_004597;Dbxref=NCBI_GP:HJH9174591.1;Name=HJH9174591.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;end_range=32593,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: protein motif:HMM:NF012786.6;locus_tag=O5C65_004597;partial=true;product=fimbria/pilus outer membrane usher protein;protein_id=HJH9174591.1;transl_table=11 ##sequence-region DALFDA020000043.1 1 32311 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000043.1 tpg region 1 32311 . + . ID=DALFDA020000043.1:1..32311;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000043.1 tpg gene 1 233 . + . ID=gene-O5C65_004598;Name=O5C65_004598;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004598;partial=true;start_range=.,1 DALFDA020000043.1 GeneMarkS-2+ CDS 1 233 . + 2 ID=cds-HJH9174592.1;Parent=gene-O5C65_004598;Dbxref=NCBI_GP:HJH9174592.1;Name=HJH9174592.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004598;partial=true;product=hypothetical protein;protein_id=HJH9174592.1;start_range=.,1;transl_table=11 DALFDA020000043.1 tpg gene 320 1909 . + . ID=gene-O5C65_004599;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=O5C65_004599 DALFDA020000043.1 Protein Homology CDS 320 1909 . + 0 ID=cds-HJH9174593.1;Parent=gene-O5C65_004599;Dbxref=NCBI_GP:HJH9174593.1;Name=HJH9174593.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=O5C65_004599;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=HJH9174593.1;transl_table=11 DALFDA020000043.1 tpg gene 1925 3214 . + . ID=gene-O5C65_004600;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=O5C65_004600 DALFDA020000043.1 Protein Homology CDS 1925 3214 . + 0 ID=cds-HJH9174594.1;Parent=gene-O5C65_004600;Dbxref=NCBI_GP:HJH9174594.1;Name=HJH9174594.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463044.1;locus_tag=O5C65_004600;product=phosphoribosylamine--glycine ligase;protein_id=HJH9174594.1;transl_table=11 DALFDA020000043.1 tpg gene 3211 4536 . - . ID=gene-O5C65_004601;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=O5C65_004601 DALFDA020000043.1 Protein Homology CDS 3211 4536 . - 0 ID=cds-HJH9174595.1;Parent=gene-O5C65_004601;Dbxref=NCBI_GP:HJH9174595.1;Name=HJH9174595.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463043.1;locus_tag=O5C65_004601;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=HJH9174595.1;transl_table=11 DALFDA020000043.1 tpg gene 4542 5939 . - . ID=gene-O5C65_004602;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=O5C65_004602 DALFDA020000043.1 Protein Homology CDS 4542 5939 . - 0 ID=cds-HJH9174596.1;Parent=gene-O5C65_004602;Dbxref=NCBI_GP:HJH9174596.1;Name=HJH9174596.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463042.1;locus_tag=O5C65_004602;product=two-component system sensor histidine kinase ZraS;protein_id=HJH9174596.1;transl_table=11 DALFDA020000043.1 tpg gene 6193 6648 . + . ID=gene-O5C65_004603;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=O5C65_004603 DALFDA020000043.1 Protein Homology CDS 6193 6648 . + 0 ID=cds-HJH9174597.1;Parent=gene-O5C65_004603;Dbxref=NCBI_GP:HJH9174597.1;Name=HJH9174597.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463041.1;locus_tag=O5C65_004603;product=zinc resistance sensor/chaperone ZraP;protein_id=HJH9174597.1;transl_table=11 DALFDA020000043.1 tpg gene 6690 7382 . - . ID=gene-O5C65_004604;Name=O5C65_004604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004604 DALFDA020000043.1 Protein Homology CDS 6690 7382 . - 0 ID=cds-HJH9174598.1;Parent=gene-O5C65_004604;Dbxref=NCBI_GP:HJH9174598.1;Name=HJH9174598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463040.1;locus_tag=O5C65_004604;product=DUF1481 domain-containing protein;protein_id=HJH9174598.1;transl_table=11 DALFDA020000043.1 tpg gene 7394 7666 . - . ID=gene-O5C65_004605;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=O5C65_004605 DALFDA020000043.1 Protein Homology CDS 7394 7666 . - 0 ID=cds-HJH9174599.1;Parent=gene-O5C65_004605;Dbxref=NCBI_GP:HJH9174599.1;Name=HJH9174599.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=O5C65_004605;product=nucleoid-associated protein HU-alpha;protein_id=HJH9174599.1;transl_table=11 DALFDA020000043.1 tpg gene 7853 8443 . - . ID=gene-O5C65_004606;Name=O5C65_004606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004606 DALFDA020000043.1 Protein Homology CDS 7853 8443 . - 0 ID=cds-HJH9174600.1;Parent=gene-O5C65_004606;Dbxref=NCBI_GP:HJH9174600.1;Name=HJH9174600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463038.1;locus_tag=O5C65_004606;product=YjaG family protein;protein_id=HJH9174600.1;transl_table=11 DALFDA020000043.1 tpg gene 8485 9156 . - . ID=gene-O5C65_004607;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=O5C65_004607 DALFDA020000043.1 Protein Homology CDS 8485 9156 . - 0 ID=cds-HJH9174601.1;Parent=gene-O5C65_004607;Dbxref=NCBI_GP:HJH9174601.1;Name=HJH9174601.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463037.1;locus_tag=O5C65_004607;product=deoxyribonuclease V;protein_id=HJH9174601.1;transl_table=11 DALFDA020000043.1 tpg gene 9166 10230 . - . ID=gene-O5C65_004608;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=O5C65_004608 DALFDA020000043.1 Protein Homology CDS 9166 10230 . - 0 ID=cds-HJH9174602.1;Parent=gene-O5C65_004608;Dbxref=NCBI_GP:HJH9174602.1;Name=HJH9174602.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463036.2;locus_tag=O5C65_004608;product=uroporphyrinogen decarboxylase;protein_id=HJH9174602.1;transl_table=11 DALFDA020000043.1 tpg gene 10271 11044 . - . ID=gene-O5C65_004609;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=O5C65_004609 DALFDA020000043.1 Protein Homology CDS 10271 11044 . - 0 ID=cds-HJH9174603.1;Parent=gene-O5C65_004609;Dbxref=NCBI_GP:HJH9174603.1;Name=HJH9174603.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463035.1;locus_tag=O5C65_004609;product=NAD(+) diphosphatase;protein_id=HJH9174603.1;transl_table=11 DALFDA020000043.1 tpg gene 11137 11625 . + . ID=gene-O5C65_004610;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=O5C65_004610 DALFDA020000043.1 Protein Homology CDS 11137 11625 . + 0 ID=cds-HJH9174604.1;Parent=gene-O5C65_004610;Dbxref=NCBI_GP:HJH9174604.1;Name=HJH9174604.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463034.1;locus_tag=O5C65_004610;product=sigma D regulator;protein_id=HJH9174604.1;transl_table=11 DALFDA020000043.1 tpg gene 11989 13884 . + . ID=gene-O5C65_004611;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=O5C65_004611 DALFDA020000043.1 Protein Homology CDS 11989 13884 . + 0 ID=cds-HJH9174605.1;Parent=gene-O5C65_004611;Dbxref=NCBI_GP:HJH9174605.1;Name=HJH9174605.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541272.1;locus_tag=O5C65_004611;product=phosphomethylpyrimidine synthase ThiC;protein_id=HJH9174605.1;transl_table=11 DALFDA020000043.1 tpg gene 13884 14519 . + . ID=gene-O5C65_004612;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=O5C65_004612 DALFDA020000043.1 Protein Homology CDS 13884 14519 . + 0 ID=cds-HJH9174606.1;Parent=gene-O5C65_004612;Dbxref=NCBI_GP:HJH9174606.1;Name=HJH9174606.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463032.1;locus_tag=O5C65_004612;product=thiamine phosphate synthase;protein_id=HJH9174606.1;transl_table=11 DALFDA020000043.1 tpg gene 14512 15270 . + . ID=gene-O5C65_004613;Name=O5C65_004613;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004613 DALFDA020000043.1 Protein Homology CDS 14512 15270 . + 0 ID=cds-HJH9174607.1;Parent=gene-O5C65_004613;Dbxref=NCBI_GP:HJH9174607.1;Name=HJH9174607.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463031.1;locus_tag=O5C65_004613;product=HesA/MoeB/ThiF family protein;protein_id=HJH9174607.1;transl_table=11 DALFDA020000043.1 tpg gene 15251 15451 . + . ID=gene-O5C65_004614;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=O5C65_004614 DALFDA020000043.1 Protein Homology CDS 15251 15451 . + 0 ID=cds-HJH9174608.1;Parent=gene-O5C65_004614;Dbxref=NCBI_GP:HJH9174608.1;Name=HJH9174608.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463030.1;locus_tag=O5C65_004614;product=sulfur carrier protein ThiS;protein_id=HJH9174608.1;transl_table=11 DALFDA020000043.1 tpg gene 15453 16223 . + . ID=gene-O5C65_004615;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=O5C65_004615 DALFDA020000043.1 Protein Homology CDS 15453 16223 . + 0 ID=cds-HJH9174609.1;Parent=gene-O5C65_004615;Dbxref=NCBI_GP:HJH9174609.1;Name=HJH9174609.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463029.1;locus_tag=O5C65_004615;product=thiazole synthase;protein_id=HJH9174609.1;transl_table=11 DALFDA020000043.1 tpg gene 16220 17353 . + . ID=gene-O5C65_004616;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=O5C65_004616 DALFDA020000043.1 Protein Homology CDS 16220 17353 . + 0 ID=cds-HJH9174610.1;Parent=gene-O5C65_004616;Dbxref=NCBI_GP:HJH9174610.1;Name=HJH9174610.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463028.1;locus_tag=O5C65_004616;product=2-iminoacetate synthase ThiH;protein_id=HJH9174610.1;transl_table=11 DALFDA020000043.1 tpg gene 17575 18603 . - . ID=gene-O5C65_004617;Name=O5C65_004617;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004617 DALFDA020000043.1 Protein Homology CDS 17575 18603 . - 0 ID=cds-HJH9174611.1;Parent=gene-O5C65_004617;Dbxref=NCBI_GP:HJH9174611.1;Name=HJH9174611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400600.1;locus_tag=O5C65_004617;product=type III secretion system effector arginine glycosyltransferase SseK1;protein_id=HJH9174611.1;transl_table=11 DALFDA020000043.1 tpg gene 18984 19328 . + . ID=gene-O5C65_004618;Name=O5C65_004618;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004618 DALFDA020000043.1 Protein Homology CDS 18984 19328 . + 0 ID=cds-HJH9174612.1;Parent=gene-O5C65_004618;Dbxref=NCBI_GP:HJH9174612.1;Name=HJH9174612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463025.1;locus_tag=O5C65_004618;product=cytoplasmic protein;protein_id=HJH9174612.1;transl_table=11 DALFDA020000043.1 tpg gene 19330 19656 . - . ID=gene-O5C65_004619;Name=O5C65_004619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004619 DALFDA020000043.1 Protein Homology CDS 19330 19656 . - 0 ID=cds-HJH9174613.1;Parent=gene-O5C65_004619;Dbxref=NCBI_GP:HJH9174613.1;Name=HJH9174613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015675457.1;locus_tag=O5C65_004619;product=hypothetical protein;protein_id=HJH9174613.1;transl_table=11 DALFDA020000043.1 tpg gene 19698 23921 . - . ID=gene-O5C65_004620;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=O5C65_004620 DALFDA020000043.1 Protein Homology CDS 19698 23921 . - 0 ID=cds-HJH9174614.1;Parent=gene-O5C65_004620;Dbxref=NCBI_GP:HJH9174614.1;Name=HJH9174614.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463023.1;locus_tag=O5C65_004620;product=DNA-directed RNA polymerase subunit beta';protein_id=HJH9174614.1;transl_table=11 DALFDA020000043.1 tpg gene 23998 28026 . - . ID=gene-O5C65_004621;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=O5C65_004621 DALFDA020000043.1 Protein Homology CDS 23998 28026 . - 0 ID=cds-HJH9174615.1;Parent=gene-O5C65_004621;Dbxref=NCBI_GP:HJH9174615.1;Name=HJH9174615.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=O5C65_004621;product=DNA-directed RNA polymerase subunit beta;protein_id=HJH9174615.1;transl_table=11 DALFDA020000043.1 tpg gene 28344 28709 . - . ID=gene-O5C65_004622;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=O5C65_004622 DALFDA020000043.1 Protein Homology CDS 28344 28709 . - 0 ID=cds-HJH9174616.1;Parent=gene-O5C65_004622;Dbxref=NCBI_GP:HJH9174616.1;Name=HJH9174616.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=O5C65_004622;product=50S ribosomal protein L7/L12;protein_id=HJH9174616.1;transl_table=11 DALFDA020000043.1 tpg gene 28776 29273 . - . ID=gene-O5C65_004623;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=O5C65_004623 DALFDA020000043.1 Protein Homology CDS 28776 29273 . - 0 ID=cds-HJH9174617.1;Parent=gene-O5C65_004623;Dbxref=NCBI_GP:HJH9174617.1;Name=HJH9174617.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=O5C65_004623;product=50S ribosomal protein L10;protein_id=HJH9174617.1;transl_table=11 DALFDA020000043.1 tpg gene 29693 30397 . - . ID=gene-O5C65_004624;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=O5C65_004624 DALFDA020000043.1 Protein Homology CDS 29693 30397 . - 0 ID=cds-HJH9174618.1;Parent=gene-O5C65_004624;Dbxref=NCBI_GP:HJH9174618.1;Name=HJH9174618.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463019.1;locus_tag=O5C65_004624;product=50S ribosomal protein L1;protein_id=HJH9174618.1;transl_table=11 DALFDA020000043.1 tpg gene 30401 30829 . - . ID=gene-O5C65_004625;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=O5C65_004625 DALFDA020000043.1 Protein Homology CDS 30401 30829 . - 0 ID=cds-HJH9174619.1;Parent=gene-O5C65_004625;Dbxref=NCBI_GP:HJH9174619.1;Name=HJH9174619.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=O5C65_004625;product=50S ribosomal protein L11;protein_id=HJH9174619.1;transl_table=11 DALFDA020000043.1 tpg gene 30987 31532 . - . ID=gene-O5C65_004626;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=O5C65_004626 DALFDA020000043.1 Protein Homology CDS 30987 31532 . - 0 ID=cds-HJH9174620.1;Parent=gene-O5C65_004626;Dbxref=NCBI_GP:HJH9174620.1;Name=HJH9174620.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=O5C65_004626;product=transcription termination/antitermination protein NusG;protein_id=HJH9174620.1;transl_table=11 DALFDA020000043.1 tpg gene 31534 31917 . - . ID=gene-O5C65_004627;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=O5C65_004627 DALFDA020000043.1 Protein Homology CDS 31534 31917 . - 0 ID=cds-HJH9174621.1;Parent=gene-O5C65_004627;Dbxref=NCBI_GP:HJH9174621.1;Name=HJH9174621.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=O5C65_004627;product=preprotein translocase subunit SecE;protein_id=HJH9174621.1;transl_table=11 DALFDA020000043.1 tpg gene 32147 32311 . - . ID=gene-O5C65_004628;Name=tuf;end_range=32311,.;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=O5C65_004628;partial=true DALFDA020000043.1 Protein Homology CDS 32147 32311 . - 0 ID=cds-HJH9174622.1;Parent=gene-O5C65_004628;Dbxref=NCBI_GP:HJH9174622.1;Name=HJH9174622.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;end_range=32311,.;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=O5C65_004628;partial=true;product=elongation factor Tu;protein_id=HJH9174622.1;transl_table=11 ##sequence-region DALFDA020000044.1 1 31979 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000044.1 tpg region 1 31979 . + . ID=DALFDA020000044.1:1..31979;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000044.1 tpg gene 57 1355 . - . ID=gene-O5C65_004629;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=O5C65_004629 DALFDA020000044.1 Protein Homology CDS 57 1355 . - 0 ID=cds-HJH9174623.1;Parent=gene-O5C65_004629;Dbxref=NCBI_GP:HJH9174623.1;Name=HJH9174623.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=O5C65_004629;product=trigger factor;protein_id=HJH9174623.1;transl_table=11 DALFDA020000044.1 tpg gene 1702 2019 . - . ID=gene-O5C65_004630;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=O5C65_004630 DALFDA020000044.1 Protein Homology CDS 1702 2019 . - 0 ID=cds-HJH9174624.1;Parent=gene-O5C65_004630;Dbxref=NCBI_GP:HJH9174624.1;Name=HJH9174624.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459442.1;locus_tag=O5C65_004630;product=transcriptional regulator BolA;protein_id=HJH9174624.1;transl_table=11 DALFDA020000044.1 tpg gene 2323 2901 . + . ID=gene-O5C65_004631;Name=O5C65_004631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004631 DALFDA020000044.1 Protein Homology CDS 2323 2901 . + 0 ID=cds-HJH9174625.1;Parent=gene-O5C65_004631;Dbxref=NCBI_GP:HJH9174625.1;Name=HJH9174625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225436.1;locus_tag=O5C65_004631;product=lipoprotein;protein_id=HJH9174625.1;transl_table=11 DALFDA020000044.1 tpg gene 2945 4420 . + . ID=gene-O5C65_004632;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=O5C65_004632 DALFDA020000044.1 Protein Homology CDS 2945 4420 . + 0 ID=cds-HJH9174626.1;Parent=gene-O5C65_004632;Dbxref=NCBI_GP:HJH9174626.1;Name=HJH9174626.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459440.1;locus_tag=O5C65_004632;product=muropeptide MFS transporter AmpG;protein_id=HJH9174626.1;transl_table=11 DALFDA020000044.1 tpg gene 4873 5829 . + . ID=gene-O5C65_004633;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=O5C65_004633 DALFDA020000044.1 Protein Homology CDS 4873 5829 . + 0 ID=cds-HJH9174627.1;Parent=gene-O5C65_004633;Dbxref=NCBI_GP:HJH9174627.1;Name=HJH9174627.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459439.1;locus_tag=O5C65_004633;product=cytochrome o ubiquinol oxidase subunit II;protein_id=HJH9174627.1;transl_table=11 DALFDA020000044.1 tpg gene 5840 7831 . + . ID=gene-O5C65_004634;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=O5C65_004634 DALFDA020000044.1 Protein Homology CDS 5840 7831 . + 0 ID=cds-HJH9174628.1;Parent=gene-O5C65_004634;Dbxref=NCBI_GP:HJH9174628.1;Name=HJH9174628.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=O5C65_004634;product=cytochrome o ubiquinol oxidase subunit I;protein_id=HJH9174628.1;transl_table=11 DALFDA020000044.1 tpg gene 7821 8435 . + . ID=gene-O5C65_004635;Name=O5C65_004635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004635 DALFDA020000044.1 Protein Homology CDS 7821 8435 . + 0 ID=cds-HJH9174629.1;Parent=gene-O5C65_004635;Dbxref=NCBI_GP:HJH9174629.1;Name=HJH9174629.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459437.1;locus_tag=O5C65_004635;product=cytochrome o ubiquinol oxidase subunit III;protein_id=HJH9174629.1;transl_table=11 DALFDA020000044.1 tpg gene 8435 8764 . + . ID=gene-O5C65_004636;Name=O5C65_004636;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004636 DALFDA020000044.1 Protein Homology CDS 8435 8764 . + 0 ID=cds-HJH9174630.1;Parent=gene-O5C65_004636;Dbxref=NCBI_GP:HJH9174630.1;Name=HJH9174630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459436.1;locus_tag=O5C65_004636;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=HJH9174630.1;transl_table=11 DALFDA020000044.1 tpg gene 8776 9666 . + . ID=gene-O5C65_004637;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=O5C65_004637 DALFDA020000044.1 Protein Homology CDS 8776 9666 . + 0 ID=cds-HJH9174631.1;Parent=gene-O5C65_004637;Dbxref=NCBI_GP:HJH9174631.1;Name=HJH9174631.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459435.1;locus_tag=O5C65_004637;product=heme o synthase;protein_id=HJH9174631.1;transl_table=11 DALFDA020000044.1 tpg gene 10000 11058 . + . ID=gene-O5C65_004638;Name=O5C65_004638;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004638 DALFDA020000044.1 Protein Homology CDS 10000 11058 . + 0 ID=cds-HJH9174632.1;Parent=gene-O5C65_004638;Dbxref=NCBI_GP:HJH9174632.1;Name=HJH9174632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001283391.1;locus_tag=O5C65_004638;product=hypothetical protein;protein_id=HJH9174632.1;transl_table=11 DALFDA020000044.1 tpg gene 11506 12870 . + . ID=gene-O5C65_004639;Name=O5C65_004639;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004639 DALFDA020000044.1 Protein Homology CDS 11506 12870 . + 0 ID=cds-HJH9174633.1;Parent=gene-O5C65_004639;Dbxref=NCBI_GP:HJH9174633.1;Name=HJH9174633.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507029.1;locus_tag=O5C65_004639;product=MFS transporter;protein_id=HJH9174633.1;transl_table=11 DALFDA020000044.1 tpg gene 12917 13408 . - . ID=gene-O5C65_004640;Name=O5C65_004640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004640 DALFDA020000044.1 Protein Homology CDS 12917 13408 . - 0 ID=cds-HJH9174634.1;Parent=gene-O5C65_004640;Dbxref=NCBI_GP:HJH9174634.1;Name=HJH9174634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=O5C65_004640;product=YajQ family cyclic di-GMP-binding protein;protein_id=HJH9174634.1;transl_table=11 DALFDA020000044.1 tpg gene 13534 14445 . + . ID=gene-O5C65_004641;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=O5C65_004641 DALFDA020000044.1 Protein Homology CDS 13534 14445 . + 0 ID=cds-HJH9174635.1;Parent=gene-O5C65_004641;Dbxref=NCBI_GP:HJH9174635.1;Name=HJH9174635.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459429.1;locus_tag=O5C65_004641;product=2-dehydropantoate 2-reductase;protein_id=HJH9174635.1;transl_table=11 DALFDA020000044.1 tpg gene 14408 14998 . + . ID=gene-O5C65_004642;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=O5C65_004642 DALFDA020000044.1 Protein Homology CDS 14408 14998 . + 0 ID=cds-HJH9174636.1;Parent=gene-O5C65_004642;Dbxref=NCBI_GP:HJH9174636.1;Name=HJH9174636.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459428.1;locus_tag=O5C65_004642;product=protein deglycase YajL;protein_id=HJH9174636.1;transl_table=11 DALFDA020000044.1 tpg gene 15108 15896 . - . ID=gene-O5C65_004643;Name=O5C65_004643;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004643 DALFDA020000044.1 Protein Homology CDS 15108 15896 . - 0 ID=cds-HJH9174637.1;Parent=gene-O5C65_004643;Dbxref=NCBI_GP:HJH9174637.1;Name=HJH9174637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000401424.1;locus_tag=O5C65_004643;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=HJH9174637.1;transl_table=11 DALFDA020000044.1 tpg gene 15907 16455 . - . ID=gene-O5C65_004644;Name=O5C65_004644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004644 DALFDA020000044.1 Protein Homology CDS 15907 16455 . - 0 ID=cds-HJH9174638.1;Parent=gene-O5C65_004644;Dbxref=NCBI_GP:HJH9174638.1;Name=HJH9174638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533962.1;locus_tag=O5C65_004644;product=4Fe-4S dicluster domain-containing protein;protein_id=HJH9174638.1;transl_table=11 DALFDA020000044.1 tpg gene 16458 18791 . - . ID=gene-O5C65_004645;Name=O5C65_004645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004645 DALFDA020000044.1 Protein Homology CDS 16458 18791 . - 0 ID=cds-HJH9174639.1;Parent=gene-O5C65_004645;Dbxref=NCBI_GP:HJH9174639.1;Name=HJH9174639.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000387839.1;locus_tag=O5C65_004645;product=molybdopterin-containing oxidoreductase family protein;protein_id=HJH9174639.1;transl_table=11 DALFDA020000044.1 tpg gene 18959 19645 . + . ID=gene-O5C65_004646;Name=O5C65_004646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004646 DALFDA020000044.1 Protein Homology CDS 18959 19645 . + 0 ID=cds-HJH9174640.1;Parent=gene-O5C65_004646;Dbxref=NCBI_GP:HJH9174640.1;Name=HJH9174640.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000808044.1;locus_tag=O5C65_004646;product=helix-turn-helix domain-containing protein;protein_id=HJH9174640.1;transl_table=11 DALFDA020000044.1 tpg gene 19693 21141 . - . ID=gene-O5C65_004647;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=O5C65_004647 DALFDA020000044.1 Protein Homology CDS 19693 21141 . - 0 ID=cds-HJH9174641.1;Parent=gene-O5C65_004647;Dbxref=NCBI_GP:HJH9174641.1;Name=HJH9174641.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=O5C65_004647;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=HJH9174641.1;transl_table=11 DALFDA020000044.1 tpg gene 21351 21593 . + . ID=gene-O5C65_004648;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=O5C65_004648 DALFDA020000044.1 Protein Homology CDS 21351 21593 . + 0 ID=cds-HJH9174642.1;Parent=gene-O5C65_004648;Dbxref=NCBI_GP:HJH9174642.1;Name=HJH9174642.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459419.1;locus_tag=O5C65_004648;product=exodeoxyribonuclease VII small subunit;protein_id=HJH9174642.1;transl_table=11 DALFDA020000044.1 tpg gene 21594 22493 . + . ID=gene-O5C65_004649;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=O5C65_004649 DALFDA020000044.1 Protein Homology CDS 21594 22493 . + 0 ID=cds-HJH9174643.1;Parent=gene-O5C65_004649;Dbxref=NCBI_GP:HJH9174643.1;Name=HJH9174643.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459418.1;locus_tag=O5C65_004649;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=HJH9174643.1;transl_table=11 DALFDA020000044.1 tpg gene 22517 24379 . + . ID=gene-O5C65_004650;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=O5C65_004650 DALFDA020000044.1 Protein Homology CDS 22517 24379 . + 0 ID=cds-HJH9174644.1;Parent=gene-O5C65_004650;Dbxref=NCBI_GP:HJH9174644.1;Name=HJH9174644.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459417.1;locus_tag=O5C65_004650;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=HJH9174644.1;transl_table=11 DALFDA020000044.1 tpg gene 24436 25410 . + . ID=gene-O5C65_004651;Name=O5C65_004651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004651 DALFDA020000044.1 Protein Homology CDS 24436 25410 . + 0 ID=cds-HJH9174645.1;Parent=gene-O5C65_004651;Dbxref=NCBI_GP:HJH9174645.1;Name=HJH9174645.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459416.1;locus_tag=O5C65_004651;product=aldo/keto reductase;protein_id=HJH9174645.1;transl_table=11 DALFDA020000044.1 tpg pseudogene 25418 25509 . + . ID=gene-O5C65_004652;Name=O5C65_004652;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004652;pseudo=true DALFDA020000044.1 Protein Homology CDS 25418 25509 . + 0 ID=cds-O5C65_004652;Parent=gene-O5C65_004652;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=O5C65_004652;product=hypothetical protein;pseudo=true;transl_table=11 DALFDA020000044.1 tpg gene 25514 26029 . - . ID=gene-O5C65_004653;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=O5C65_004653 DALFDA020000044.1 Protein Homology CDS 25514 26029 . - 0 ID=cds-HJH9174646.1;Parent=gene-O5C65_004653;Dbxref=NCBI_GP:HJH9174646.1;Name=HJH9174646.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459415.1;locus_tag=O5C65_004653;product=phosphatidylglycerophosphatase A;protein_id=HJH9174646.1;transl_table=11 DALFDA020000044.1 tpg gene 26007 26987 . - . ID=gene-O5C65_004654;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=O5C65_004654 DALFDA020000044.1 Protein Homology CDS 26007 26987 . - 0 ID=cds-HJH9174647.1;Parent=gene-O5C65_004654;Dbxref=NCBI_GP:HJH9174647.1;Name=HJH9174647.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308497.1;locus_tag=O5C65_004654;product=thiamine-phosphate kinase;protein_id=HJH9174647.1;transl_table=11 DALFDA020000044.1 tpg gene 27066 27485 . - . ID=gene-O5C65_004655;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=O5C65_004655 DALFDA020000044.1 Protein Homology CDS 27066 27485 . - 0 ID=cds-HJH9174648.1;Parent=gene-O5C65_004655;Dbxref=NCBI_GP:HJH9174648.1;Name=HJH9174648.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459413.1;locus_tag=O5C65_004655;product=transcription antitermination factor NusB;protein_id=HJH9174648.1;transl_table=11 DALFDA020000044.1 tpg gene 27506 27976 . - . ID=gene-O5C65_004656;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=O5C65_004656 DALFDA020000044.1 Protein Homology CDS 27506 27976 . - 0 ID=cds-HJH9174649.1;Parent=gene-O5C65_004656;Dbxref=NCBI_GP:HJH9174649.1;Name=HJH9174649.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=O5C65_004656;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=HJH9174649.1;transl_table=11 DALFDA020000044.1 tpg gene 28065 29168 . - . ID=gene-O5C65_004657;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=O5C65_004657 DALFDA020000044.1 Protein Homology CDS 28065 29168 . - 0 ID=cds-HJH9174650.1;Parent=gene-O5C65_004657;Dbxref=NCBI_GP:HJH9174650.1;Name=HJH9174650.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459411.1;locus_tag=O5C65_004657;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=HJH9174650.1;transl_table=11 DALFDA020000044.1 tpg gene 29172 29621 . - . ID=gene-O5C65_004658;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=O5C65_004658 DALFDA020000044.1 Protein Homology CDS 29172 29621 . - 0 ID=cds-HJH9174651.1;Parent=gene-O5C65_004658;Dbxref=NCBI_GP:HJH9174651.1;Name=HJH9174651.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=O5C65_004658;product=transcriptional regulator NrdR;protein_id=HJH9174651.1;transl_table=11 DALFDA020000044.1 tpg gene 29773 30312 . + . ID=gene-O5C65_004659;Name=O5C65_004659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004659 DALFDA020000044.1 Protein Homology CDS 29773 30312 . + 0 ID=cds-HJH9174652.1;Parent=gene-O5C65_004659;Dbxref=NCBI_GP:HJH9174652.1;Name=HJH9174652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459409.1;locus_tag=O5C65_004659;product=DUF3251 domain-containing protein;protein_id=HJH9174652.1;transl_table=11 DALFDA020000044.1 tpg gene 30612 31475 . + . ID=gene-O5C65_004660;Name=O5C65_004660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004660 DALFDA020000044.1 Protein Homology CDS 30612 31475 . + 0 ID=cds-HJH9174653.1;Parent=gene-O5C65_004660;Dbxref=NCBI_GP:HJH9174653.1;Name=HJH9174653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459408.1;locus_tag=O5C65_004660;product=nucleoside-specific channel-forming protein Tsx;protein_id=HJH9174653.1;transl_table=11 DALFDA020000044.1 tpg gene 31559 31666 . - . ID=gene-O5C65_004661;Name=O5C65_004661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004661 DALFDA020000044.1 Protein Homology CDS 31559 31666 . - 0 ID=cds-HJH9174654.1;Parent=gene-O5C65_004661;Dbxref=NCBI_GP:HJH9174654.1;Name=HJH9174654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000176312.1;locus_tag=O5C65_004661;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=HJH9174654.1;transl_table=11 ##sequence-region DALFDA020000045.1 1 30498 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000045.1 tpg region 1 30498 . + . ID=DALFDA020000045.1:1..30498;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000045.1 tpg gene 1 257 . - . ID=gene-O5C65_004662;Name=O5C65_004662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004662;partial=true;start_range=.,1 DALFDA020000045.1 Protein Homology CDS 1 257 . - 0 ID=cds-HJH9174655.1;Parent=gene-O5C65_004662;Dbxref=NCBI_GP:HJH9174655.1;Name=HJH9174655.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=O5C65_004662;partial=true;product=GTP-binding protein;protein_id=HJH9174655.1;start_range=.,1;transl_table=11 DALFDA020000045.1 tpg gene 329 2443 . - . ID=gene-O5C65_004663;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=O5C65_004663 DALFDA020000045.1 Protein Homology CDS 329 2443 . - 0 ID=cds-HJH9174656.1;Parent=gene-O5C65_004663;Dbxref=NCBI_GP:HJH9174656.1;Name=HJH9174656.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=O5C65_004663;product=elongation factor G;protein_id=HJH9174656.1;transl_table=11 DALFDA020000045.1 tpg gene 2540 3010 . - . ID=gene-O5C65_004664;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=O5C65_004664 DALFDA020000045.1 Protein Homology CDS 2540 3010 . - 0 ID=cds-HJH9174657.1;Parent=gene-O5C65_004664;Dbxref=NCBI_GP:HJH9174657.1;Name=HJH9174657.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=O5C65_004664;product=30S ribosomal protein S7;protein_id=HJH9174657.1;transl_table=11 DALFDA020000045.1 tpg gene 3106 3480 . - . ID=gene-O5C65_004665;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=O5C65_004665 DALFDA020000045.1 Protein Homology CDS 3106 3480 . - 0 ID=cds-HJH9174658.1;Parent=gene-O5C65_004665;Dbxref=NCBI_GP:HJH9174658.1;Name=HJH9174658.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=O5C65_004665;product=30S ribosomal protein S12;protein_id=HJH9174658.1;transl_table=11 DALFDA020000045.1 tpg gene 3606 3893 . - . ID=gene-O5C65_004666;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=O5C65_004666 DALFDA020000045.1 Protein Homology CDS 3606 3893 . - 0 ID=cds-HJH9174659.1;Parent=gene-O5C65_004666;Dbxref=NCBI_GP:HJH9174659.1;Name=HJH9174659.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462353.1;locus_tag=O5C65_004666;product=sulfurtransferase complex subunit TusB;protein_id=HJH9174659.1;transl_table=11 DALFDA020000045.1 tpg gene 3901 4257 . - . ID=gene-O5C65_004667;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=O5C65_004667 DALFDA020000045.1 Protein Homology CDS 3901 4257 . - 0 ID=cds-HJH9174660.1;Parent=gene-O5C65_004667;Dbxref=NCBI_GP:HJH9174660.1;Name=HJH9174660.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462354.1;locus_tag=O5C65_004667;product=sulfurtransferase complex subunit TusC;protein_id=HJH9174660.1;transl_table=11 DALFDA020000045.1 tpg gene 4257 4643 . - . ID=gene-O5C65_004668;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=O5C65_004668 DALFDA020000045.1 Protein Homology CDS 4257 4643 . - 0 ID=cds-HJH9174661.1;Parent=gene-O5C65_004668;Dbxref=NCBI_GP:HJH9174661.1;Name=HJH9174661.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462355.1;locus_tag=O5C65_004668;product=sulfurtransferase complex subunit TusD;protein_id=HJH9174661.1;transl_table=11 DALFDA020000045.1 tpg gene 4643 5365 . - . ID=gene-O5C65_004669;Name=O5C65_004669;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004669 DALFDA020000045.1 Protein Homology CDS 4643 5365 . - 0 ID=cds-HJH9174662.1;Parent=gene-O5C65_004669;Dbxref=NCBI_GP:HJH9174662.1;Name=HJH9174662.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462356.1;locus_tag=O5C65_004669;product=helix-turn-helix transcriptional regulator;protein_id=HJH9174662.1;transl_table=11 DALFDA020000045.1 tpg gene 5642 6460 . - . ID=gene-O5C65_004670;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=O5C65_004670 DALFDA020000045.1 Protein Homology CDS 5642 6460 . - 0 ID=cds-HJH9174663.1;Parent=gene-O5C65_004670;Dbxref=NCBI_GP:HJH9174663.1;Name=HJH9174663.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462357.1;locus_tag=O5C65_004670;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=HJH9174663.1;transl_table=11 DALFDA020000045.1 tpg gene 6680 6898 . + . ID=gene-O5C65_004671;Name=O5C65_004671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004671 DALFDA020000045.1 Protein Homology CDS 6680 6898 . + 0 ID=cds-HJH9174664.1;Parent=gene-O5C65_004671;Dbxref=NCBI_GP:HJH9174664.1;Name=HJH9174664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462358.1;locus_tag=O5C65_004671;product=protein SlyX;protein_id=HJH9174664.1;transl_table=11 DALFDA020000045.1 tpg gene 7086 7676 . - . ID=gene-O5C65_004672;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=O5C65_004672 DALFDA020000045.1 Protein Homology CDS 7086 7676 . - 0 ID=cds-HJH9174665.1;Parent=gene-O5C65_004672;Dbxref=NCBI_GP:HJH9174665.1;Name=HJH9174665.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462359.1;locus_tag=O5C65_004672;product=peptidylprolyl isomerase;protein_id=HJH9174665.1;transl_table=11 DALFDA020000045.1 tpg gene 7771 7971 . - . ID=gene-O5C65_004673;Name=O5C65_004673;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004673 DALFDA020000045.1 Protein Homology CDS 7771 7971 . - 0 ID=cds-HJH9174666.1;Parent=gene-O5C65_004673;Dbxref=NCBI_GP:HJH9174666.1;Name=HJH9174666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462360.1;locus_tag=O5C65_004673;product=YheV family putative zinc ribbon protein;protein_id=HJH9174666.1;transl_table=11 DALFDA020000045.1 tpg gene 7982 9787 . - . ID=gene-O5C65_004674;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=O5C65_004674 DALFDA020000045.1 Protein Homology CDS 7982 9787 . - 0 ID=cds-HJH9174667.1;Parent=gene-O5C65_004674;Dbxref=NCBI_GP:HJH9174667.1;Name=HJH9174667.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462361.1;locus_tag=O5C65_004674;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=HJH9174667.1;transl_table=11 DALFDA020000045.1 tpg gene 9787 10338 . - . ID=gene-O5C65_004675;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=O5C65_004675 DALFDA020000045.1 Protein Homology CDS 9787 10338 . - 0 ID=cds-HJH9174668.1;Parent=gene-O5C65_004675;Dbxref=NCBI_GP:HJH9174668.1;Name=HJH9174668.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462362.1;locus_tag=O5C65_004675;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=HJH9174668.1;transl_table=11 DALFDA020000045.1 tpg gene 10604 12511 . + . ID=gene-O5C65_004676;Name=O5C65_004676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004676 DALFDA020000045.1 Protein Homology CDS 10604 12511 . + 0 ID=cds-HJH9174669.1;Parent=gene-O5C65_004676;Dbxref=NCBI_GP:HJH9174669.1;Name=HJH9174669.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462363.1;locus_tag=O5C65_004676;product=ABC transporter ATP-binding protein;protein_id=HJH9174669.1;transl_table=11 DALFDA020000045.1 tpg gene 12674 12895 . + . ID=gene-O5C65_004677;Name=O5C65_004677;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004677 DALFDA020000045.1 Protein Homology CDS 12674 12895 . + 0 ID=cds-HJH9174670.1;Parent=gene-O5C65_004677;Dbxref=NCBI_GP:HJH9174670.1;Name=HJH9174670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054026.1;locus_tag=O5C65_004677;product=LysR family transcriptional regulator;protein_id=HJH9174670.1;transl_table=11 DALFDA020000045.1 tpg gene 12897 13208 . - . ID=gene-O5C65_004678;Name=O5C65_004678;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004678 DALFDA020000045.1 Protein Homology CDS 12897 13208 . - 0 ID=cds-HJH9174671.1;Parent=gene-O5C65_004678;Dbxref=NCBI_GP:HJH9174671.1;Name=HJH9174671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462364.1;locus_tag=O5C65_004678;product=monooxygenase;protein_id=HJH9174671.1;transl_table=11 DALFDA020000045.1 tpg gene 13406 14473 . + . ID=gene-O5C65_004679;Name=O5C65_004679;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004679 DALFDA020000045.1 Protein Homology CDS 13406 14473 . + 0 ID=cds-HJH9174672.1;Parent=gene-O5C65_004679;Dbxref=NCBI_GP:HJH9174672.1;Name=HJH9174672.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462365.1;locus_tag=O5C65_004679;product=hydrolase;protein_id=HJH9174672.1;transl_table=11 DALFDA020000045.1 tpg gene 14470 14688 . + . ID=gene-O5C65_004680;Name=O5C65_004680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004680 DALFDA020000045.1 Protein Homology CDS 14470 14688 . + 0 ID=cds-HJH9174673.1;Parent=gene-O5C65_004680;Dbxref=NCBI_GP:HJH9174673.1;Name=HJH9174673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=O5C65_004680;product=YheU family protein;protein_id=HJH9174673.1;transl_table=11 DALFDA020000045.1 tpg gene 14740 15609 . + . ID=gene-O5C65_004681;Name=O5C65_004681;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004681 DALFDA020000045.1 Protein Homology CDS 14740 15609 . + 0 ID=cds-HJH9174674.1;Parent=gene-O5C65_004681;Dbxref=NCBI_GP:HJH9174674.1;Name=HJH9174674.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462367.1;locus_tag=O5C65_004681;product=phosphoribulokinase;protein_id=HJH9174674.1;transl_table=11 DALFDA020000045.1 tpg gene 15705 16109 . - . ID=gene-O5C65_004682;Name=O5C65_004682;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004682 DALFDA020000045.1 Protein Homology CDS 15705 16109 . - 0 ID=cds-HJH9174675.1;Parent=gene-O5C65_004682;Dbxref=NCBI_GP:HJH9174675.1;Name=HJH9174675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462368.1;locus_tag=O5C65_004682;product=OsmC family protein;protein_id=HJH9174675.1;transl_table=11 DALFDA020000045.1 tpg gene 16417 17049 . + . ID=gene-O5C65_004683;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=O5C65_004683 DALFDA020000045.1 Protein Homology CDS 16417 17049 . + 0 ID=cds-HJH9174676.1;Parent=gene-O5C65_004683;Dbxref=NCBI_GP:HJH9174676.1;Name=HJH9174676.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=O5C65_004683;product=cAMP-activated global transcriptional regulator CRP;protein_id=HJH9174676.1;transl_table=11 DALFDA020000045.1 tpg gene 17098 19185 . + . ID=gene-O5C65_004684;Name=O5C65_004684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004684 DALFDA020000045.1 Protein Homology CDS 17098 19185 . + 0 ID=cds-HJH9174677.1;Parent=gene-O5C65_004684;Dbxref=NCBI_GP:HJH9174677.1;Name=HJH9174677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462370.1;locus_tag=O5C65_004684;product=YccS/YhfK family putative transporter;protein_id=HJH9174677.1;transl_table=11 DALFDA020000045.1 tpg gene 19228 20445 . - . ID=gene-O5C65_004685;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=O5C65_004685 DALFDA020000045.1 Protein Homology CDS 19228 20445 . - 0 ID=cds-HJH9174678.1;Parent=gene-O5C65_004685;Dbxref=NCBI_GP:HJH9174678.1;Name=HJH9174678.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462371.1;locus_tag=O5C65_004685;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=HJH9174678.1;transl_table=11 DALFDA020000045.1 tpg gene 20531 21094 . - . ID=gene-O5C65_004686;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=O5C65_004686 DALFDA020000045.1 Protein Homology CDS 20531 21094 . - 0 ID=cds-HJH9174679.1;Parent=gene-O5C65_004686;Dbxref=NCBI_GP:HJH9174679.1;Name=HJH9174679.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462372.1;locus_tag=O5C65_004686;product=aminodeoxychorismate synthase component 2;protein_id=HJH9174679.1;transl_table=11 DALFDA020000045.1 tpg gene 21126 21728 . - . ID=gene-O5C65_004687;Name=O5C65_004687;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004687 DALFDA020000045.1 Protein Homology CDS 21126 21728 . - 0 ID=cds-HJH9174680.1;Parent=gene-O5C65_004687;Dbxref=NCBI_GP:HJH9174680.1;Name=HJH9174680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462373.1;locus_tag=O5C65_004687;product=putative adenosine monophosphate-protein transferase Fic;protein_id=HJH9174680.1;transl_table=11 DALFDA020000045.1 tpg gene 21718 21885 . - . ID=gene-O5C65_004688;Name=O5C65_004688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004688 DALFDA020000045.1 Protein Homology CDS 21718 21885 . - 0 ID=cds-HJH9174681.1;Parent=gene-O5C65_004688;Dbxref=NCBI_GP:HJH9174681.1;Name=HJH9174681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462374.1;locus_tag=O5C65_004688;product=YhfG family protein;protein_id=HJH9174681.1;transl_table=11 DALFDA020000045.1 tpg gene 21994 22566 . - . ID=gene-O5C65_004689;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=O5C65_004689 DALFDA020000045.1 Protein Homology CDS 21994 22566 . - 0 ID=cds-HJH9174682.1;Parent=gene-O5C65_004689;Dbxref=NCBI_GP:HJH9174682.1;Name=HJH9174682.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462375.1;locus_tag=O5C65_004689;product=peptidylprolyl isomerase A;protein_id=HJH9174682.1;transl_table=11 DALFDA020000045.1 tpg gene 22843 24024 . + . ID=gene-O5C65_004690;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=O5C65_004690 DALFDA020000045.1 Protein Homology CDS 22843 24024 . + 0 ID=cds-HJH9174683.1;Parent=gene-O5C65_004690;Dbxref=NCBI_GP:HJH9174683.1;Name=HJH9174683.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462376.1;locus_tag=O5C65_004690;product=MFS transporter TsgA;protein_id=HJH9174683.1;transl_table=11 DALFDA020000045.1 tpg gene 24342 26885 . + . ID=gene-O5C65_004691;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=O5C65_004691 DALFDA020000045.1 Protein Homology CDS 24342 26885 . + 0 ID=cds-HJH9174684.1;Parent=gene-O5C65_004691;Dbxref=NCBI_GP:HJH9174684.1;Name=HJH9174684.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=O5C65_004691;product=NADPH-nitrite reductase large subunit;protein_id=HJH9174684.1;transl_table=11 DALFDA020000045.1 tpg gene 26882 27208 . + . ID=gene-O5C65_004692;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=O5C65_004692 DALFDA020000045.1 Protein Homology CDS 26882 27208 . + 0 ID=cds-HJH9174685.1;Parent=gene-O5C65_004692;Dbxref=NCBI_GP:HJH9174685.1;Name=HJH9174685.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571429.1;locus_tag=O5C65_004692;product=nitrite reductase small subunit NirD;protein_id=HJH9174685.1;transl_table=11 DALFDA020000045.1 tpg gene 27391 28200 . + . ID=gene-O5C65_004693;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=O5C65_004693 DALFDA020000045.1 Protein Homology CDS 27391 28200 . + 0 ID=cds-HJH9174686.1;Parent=gene-O5C65_004693;Dbxref=NCBI_GP:HJH9174686.1;Name=HJH9174686.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462379.1;locus_tag=O5C65_004693;product=nitrite transporter NirC;protein_id=HJH9174686.1;transl_table=11 DALFDA020000045.1 tpg gene 28212 29585 . + . ID=gene-O5C65_004694;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=O5C65_004694 DALFDA020000045.1 Protein Homology CDS 28212 29585 . + 0 ID=cds-HJH9174687.1;Parent=gene-O5C65_004694;Dbxref=NCBI_GP:HJH9174687.1;Name=HJH9174687.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462380.1;locus_tag=O5C65_004694;product=siroheme synthase CysG;protein_id=HJH9174687.1;transl_table=11 DALFDA020000045.1 tpg gene 29912 30498 . + . ID=gene-O5C65_004695;Name=O5C65_004695;end_range=30498,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004695;partial=true DALFDA020000045.1 Protein Homology CDS 29912 30498 . + 0 ID=cds-HJH9174688.1;Parent=gene-O5C65_004695;Dbxref=NCBI_GP:HJH9174688.1;Name=HJH9174688.1;end_range=30498,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462381.1;locus_tag=O5C65_004695;partial=true;product=autotransporter adhesin BigA;protein_id=HJH9174688.1;transl_table=11 ##sequence-region DALFDA020000046.1 1 29385 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000046.1 tpg region 1 29385 . + . ID=DALFDA020000046.1:1..29385;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000046.1 tpg gene 160 597 . - . ID=gene-O5C65_004696;Name=O5C65_004696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004696 DALFDA020000046.1 Protein Homology CDS 160 597 . - 0 ID=cds-HJH9174689.1;Parent=gene-O5C65_004696;Dbxref=NCBI_GP:HJH9174689.1;Name=HJH9174689.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463046.1;locus_tag=O5C65_004696;product=acetyltransferase;protein_id=HJH9174689.1;transl_table=11 DALFDA020000046.1 tpg gene 754 1683 . + . ID=gene-O5C65_004697;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=O5C65_004697 DALFDA020000046.1 Protein Homology CDS 754 1683 . + 0 ID=cds-HJH9174690.1;Parent=gene-O5C65_004697;Dbxref=NCBI_GP:HJH9174690.1;Name=HJH9174690.1;Ontology_term=GO:0019281,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine|0019281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=O5C65_004697;product=homoserine O-succinyltransferase MetA;protein_id=HJH9174690.1;transl_table=11 DALFDA020000046.1 tpg gene 1952 3553 . + . ID=gene-O5C65_004698;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=O5C65_004698 DALFDA020000046.1 Protein Homology CDS 1952 3553 . + 0 ID=cds-HJH9174691.1;Parent=gene-O5C65_004698;Dbxref=NCBI_GP:HJH9174691.1;Name=HJH9174691.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463048.1;locus_tag=O5C65_004698;product=malate synthase A;protein_id=HJH9174691.1;transl_table=11 DALFDA020000046.1 tpg gene 3585 4889 . + . ID=gene-O5C65_004699;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=O5C65_004699 DALFDA020000046.1 Protein Homology CDS 3585 4889 . + 0 ID=cds-HJH9174692.1;Parent=gene-O5C65_004699;Dbxref=NCBI_GP:HJH9174692.1;Name=HJH9174692.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463049.1;locus_tag=O5C65_004699;product=isocitrate lyase;protein_id=HJH9174692.1;transl_table=11 DALFDA020000046.1 tpg gene 4991 6742 . + . ID=gene-O5C65_004700;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=O5C65_004700 DALFDA020000046.1 Protein Homology CDS 4991 6742 . + 0 ID=cds-HJH9174693.1;Parent=gene-O5C65_004700;Dbxref=NCBI_GP:HJH9174693.1;Name=HJH9174693.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463050.1;locus_tag=O5C65_004700;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=HJH9174693.1;transl_table=11 DALFDA020000046.1 tpg gene 6706 7113 . - . ID=gene-O5C65_004701;Name=O5C65_004701;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004701 DALFDA020000046.1 Protein Homology CDS 6706 7113 . - 0 ID=cds-HJH9174694.1;Parent=gene-O5C65_004701;Dbxref=NCBI_GP:HJH9174694.1;Name=HJH9174694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463051.1;locus_tag=O5C65_004701;product=ASCH domain-containing protein;protein_id=HJH9174694.1;transl_table=11 DALFDA020000046.1 tpg gene 7124 7948 . - . ID=gene-O5C65_004702;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=O5C65_004702 DALFDA020000046.1 Protein Homology CDS 7124 7948 . - 0 ID=cds-HJH9174695.1;Parent=gene-O5C65_004702;Dbxref=NCBI_GP:HJH9174695.1;Name=HJH9174695.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463052.1;locus_tag=O5C65_004702;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=HJH9174695.1;transl_table=11 DALFDA020000046.1 tpg gene 8253 11936 . + . ID=gene-O5C65_004703;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=O5C65_004703 DALFDA020000046.1 Protein Homology CDS 8253 11936 . + 0 ID=cds-HJH9174696.1;Parent=gene-O5C65_004703;Dbxref=NCBI_GP:HJH9174696.1;Name=HJH9174696.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312964.1;locus_tag=O5C65_004703;product=methionine synthase;protein_id=HJH9174696.1;transl_table=11 DALFDA020000046.1 tpg gene 12203 13834 . + . ID=gene-O5C65_004704;Name=O5C65_004704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004704 DALFDA020000046.1 Protein Homology CDS 12203 13834 . + 0 ID=cds-HJH9174697.1;Parent=gene-O5C65_004704;Dbxref=NCBI_GP:HJH9174697.1;Name=HJH9174697.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463054.1;locus_tag=O5C65_004704;product=Na/Pi cotransporter family protein;protein_id=HJH9174697.1;transl_table=11 DALFDA020000046.1 tpg gene 13910 14599 . - . ID=gene-O5C65_004705;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=O5C65_004705 DALFDA020000046.1 Protein Homology CDS 13910 14599 . - 0 ID=cds-HJH9174698.1;Parent=gene-O5C65_004705;Dbxref=NCBI_GP:HJH9174698.1;Name=HJH9174698.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463055.1;locus_tag=O5C65_004705;product=dipeptidase PepE;protein_id=HJH9174698.1;transl_table=11 DALFDA020000046.1 tpg gene 14671 14772 . + . ID=gene-O5C65_004706;Name=O5C65_004706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004706 DALFDA020000046.1 Protein Homology CDS 14671 14772 . + 0 ID=cds-HJH9174699.1;Parent=gene-O5C65_004706;Dbxref=NCBI_GP:HJH9174699.1;Name=HJH9174699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463056.1;locus_tag=O5C65_004706;product=hypothetical protein;protein_id=HJH9174699.1;transl_table=11 DALFDA020000046.1 tpg gene 14807 15346 . + . ID=gene-O5C65_004707;Name=O5C65_004707;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004707 DALFDA020000046.1 Protein Homology CDS 14807 15346 . + 0 ID=cds-HJH9174700.1;Parent=gene-O5C65_004707;Dbxref=NCBI_GP:HJH9174700.1;Name=HJH9174700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463057.1;locus_tag=O5C65_004707;product=DUF2058 domain-containing protein;protein_id=HJH9174700.1;transl_table=11 DALFDA020000046.1 tpg gene 15393 16262 . + . ID=gene-O5C65_004708;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=O5C65_004708 DALFDA020000046.1 Protein Homology CDS 15393 16262 . + 0 ID=cds-HJH9174701.1;Parent=gene-O5C65_004708;Dbxref=NCBI_GP:HJH9174701.1;Name=HJH9174701.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463058.1;locus_tag=O5C65_004708;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=HJH9174701.1;transl_table=11 DALFDA020000046.1 tpg gene 16259 16531 . - . ID=gene-O5C65_004709;Name=O5C65_004709;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004709 DALFDA020000046.1 Protein Homology CDS 16259 16531 . - 0 ID=cds-HJH9174702.1;Parent=gene-O5C65_004709;Dbxref=NCBI_GP:HJH9174702.1;Name=HJH9174702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463059.1;locus_tag=O5C65_004709;product=DUF3811 domain-containing protein;protein_id=HJH9174702.1;transl_table=11 DALFDA020000046.1 tpg gene 16742 17500 . - . ID=gene-O5C65_004710;Name=O5C65_004710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004710 DALFDA020000046.1 Protein Homology CDS 16742 17500 . - 0 ID=cds-HJH9174703.1;Parent=gene-O5C65_004710;Dbxref=NCBI_GP:HJH9174703.1;Name=HJH9174703.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001068167.1;locus_tag=O5C65_004710;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=HJH9174703.1;transl_table=11 DALFDA020000046.1 tpg gene 17487 18350 . - . ID=gene-O5C65_004711;Name=O5C65_004711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004711 DALFDA020000046.1 Protein Homology CDS 17487 18350 . - 0 ID=cds-HJH9174704.1;Parent=gene-O5C65_004711;Dbxref=NCBI_GP:HJH9174704.1;Name=HJH9174704.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000924639.1;locus_tag=O5C65_004711;product=Cof-type HAD-IIB family hydrolase;protein_id=HJH9174704.1;transl_table=11 DALFDA020000046.1 tpg gene 18367 19206 . - . ID=gene-O5C65_004712;Name=O5C65_004712;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004712 DALFDA020000046.1 Protein Homology CDS 18367 19206 . - 0 ID=cds-HJH9174705.1;Parent=gene-O5C65_004712;Dbxref=NCBI_GP:HJH9174705.1;Name=HJH9174705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000472335.1;locus_tag=O5C65_004712;product=histidine biosynthesis protein;protein_id=HJH9174705.1;transl_table=11 DALFDA020000046.1 tpg gene 19230 20819 . - . ID=gene-O5C65_004713;Name=O5C65_004713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004713 DALFDA020000046.1 Protein Homology CDS 19230 20819 . - 0 ID=cds-HJH9174706.1;Parent=gene-O5C65_004713;Dbxref=NCBI_GP:HJH9174706.1;Name=HJH9174706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716843.1;locus_tag=O5C65_004713;product=PTS sugar transporter;protein_id=HJH9174706.1;transl_table=11 DALFDA020000046.1 tpg gene 21197 22546 . - . ID=gene-O5C65_004714;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=O5C65_004714 DALFDA020000046.1 Protein Homology CDS 21197 22546 . - 0 ID=cds-HJH9174707.1;Parent=gene-O5C65_004714;Dbxref=NCBI_GP:HJH9174707.1;Name=HJH9174707.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463085.1;locus_tag=O5C65_004714;product=lysine-sensitive aspartokinase 3;protein_id=HJH9174707.1;transl_table=11 DALFDA020000046.1 tpg gene 22934 24583 . + . ID=gene-O5C65_004715;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=O5C65_004715 DALFDA020000046.1 Protein Homology CDS 22934 24583 . + 0 ID=cds-HJH9174708.1;Parent=gene-O5C65_004715;Dbxref=NCBI_GP:HJH9174708.1;Name=HJH9174708.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463086.1;locus_tag=O5C65_004715;product=glucose-6-phosphate isomerase;protein_id=HJH9174708.1;transl_table=11 DALFDA020000046.1 tpg gene 25027 25269 . + . ID=gene-O5C65_004716;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=O5C65_004716 DALFDA020000046.1 Protein Homology CDS 25027 25269 . + 0 ID=cds-HJH9174709.1;Parent=gene-O5C65_004716;Dbxref=NCBI_GP:HJH9174709.1;Name=HJH9174709.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=O5C65_004716;product=exopolysaccharide production protein YjbE;protein_id=HJH9174709.1;transl_table=11 DALFDA020000046.1 tpg gene 25333 25971 . + . ID=gene-O5C65_004717;Name=O5C65_004717;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004717 DALFDA020000046.1 Protein Homology CDS 25333 25971 . + 0 ID=cds-HJH9174710.1;Parent=gene-O5C65_004717;Dbxref=NCBI_GP:HJH9174710.1;Name=HJH9174710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824802.1;locus_tag=O5C65_004717;product=YjbF family lipoprotein;protein_id=HJH9174710.1;transl_table=11 DALFDA020000046.1 tpg gene 25968 26705 . + . ID=gene-O5C65_004718;Name=O5C65_004718;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004718 DALFDA020000046.1 Protein Homology CDS 25968 26705 . + 0 ID=cds-HJH9174711.1;Parent=gene-O5C65_004718;Dbxref=NCBI_GP:HJH9174711.1;Name=HJH9174711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463089.1;locus_tag=O5C65_004718;product=capsule biosynthesis GfcC D2 domain-containing protein;protein_id=HJH9174711.1;transl_table=11 DALFDA020000046.1 tpg gene 26705 28801 . + . ID=gene-O5C65_004719;Name=O5C65_004719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004719 DALFDA020000046.1 Protein Homology CDS 26705 28801 . + 0 ID=cds-HJH9174712.1;Parent=gene-O5C65_004719;Dbxref=NCBI_GP:HJH9174712.1;Name=HJH9174712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463090.1;locus_tag=O5C65_004719;product=YjbH domain-containing protein;protein_id=HJH9174712.1;transl_table=11 DALFDA020000046.1 tpg gene 28944 29354 . + . ID=gene-O5C65_004720;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=O5C65_004720 DALFDA020000046.1 Protein Homology CDS 28944 29354 . + 0 ID=cds-HJH9174713.1;Parent=gene-O5C65_004720;Dbxref=NCBI_GP:HJH9174713.1;Name=HJH9174713.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463091.1;locus_tag=O5C65_004720;product=phosphate-starvation-inducible protein PsiE;protein_id=HJH9174713.1;transl_table=11 ##sequence-region DALFDA020000047.1 1 29136 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000047.1 tpg region 1 29136 . + . ID=DALFDA020000047.1:1..29136;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000047.1 tpg gene 226 1545 . + . ID=gene-O5C65_004721;Name=O5C65_004721;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004721 DALFDA020000047.1 Protein Homology CDS 226 1545 . + 0 ID=cds-HJH9174714.1;Parent=gene-O5C65_004721;Dbxref=NCBI_GP:HJH9174714.1;Name=HJH9174714.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021778.6;locus_tag=O5C65_004721;product=YncE family protein;protein_id=HJH9174714.1;transl_table=11 DALFDA020000047.1 tpg gene 1862 2761 . - . ID=gene-O5C65_004722;Name=O5C65_004722;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004722 DALFDA020000047.1 Protein Homology CDS 1862 2761 . - 0 ID=cds-HJH9174715.1;Parent=gene-O5C65_004722;Dbxref=NCBI_GP:HJH9174715.1;Name=HJH9174715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750820.1;locus_tag=O5C65_004722;product=hypothetical protein;protein_id=HJH9174715.1;transl_table=11 DALFDA020000047.1 tpg gene 2851 3762 . - . ID=gene-O5C65_004723;Name=O5C65_004723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004723 DALFDA020000047.1 Protein Homology CDS 2851 3762 . - 0 ID=cds-HJH9174716.1;Parent=gene-O5C65_004723;Dbxref=NCBI_GP:HJH9174716.1;Name=HJH9174716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000881184.1;locus_tag=O5C65_004723;product=hypothetical protein;protein_id=HJH9174716.1;transl_table=11 DALFDA020000047.1 tpg gene 3851 5812 . - . ID=gene-O5C65_004724;Name=O5C65_004724;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004724 DALFDA020000047.1 Protein Homology CDS 3851 5812 . - 0 ID=cds-HJH9174717.1;Parent=gene-O5C65_004724;Dbxref=NCBI_GP:HJH9174717.1;Name=HJH9174717.1;Ontology_term=GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750822.1;locus_tag=O5C65_004724;product=ArdC-like ssDNA-binding domain-containing protein;protein_id=HJH9174717.1;transl_table=11 DALFDA020000047.1 tpg gene 5915 6400 . - . ID=gene-O5C65_004725;Name=O5C65_004725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004725 DALFDA020000047.1 Protein Homology CDS 5915 6400 . - 0 ID=cds-HJH9174718.1;Parent=gene-O5C65_004725;Dbxref=NCBI_GP:HJH9174718.1;Name=HJH9174718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000115422.1;locus_tag=O5C65_004725;product=hypothetical protein;protein_id=HJH9174718.1;transl_table=11 DALFDA020000047.1 tpg gene 6479 6766 . - . ID=gene-O5C65_004726;Name=O5C65_004726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004726 DALFDA020000047.1 Protein Homology CDS 6479 6766 . - 0 ID=cds-HJH9174719.1;Parent=gene-O5C65_004726;Dbxref=NCBI_GP:HJH9174719.1;Name=HJH9174719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750824.1;locus_tag=O5C65_004726;product=hypothetical protein;protein_id=HJH9174719.1;transl_table=11 DALFDA020000047.1 tpg gene 6766 7227 . - . ID=gene-O5C65_004727;Name=O5C65_004727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004727 DALFDA020000047.1 Protein Homology CDS 6766 7227 . - 0 ID=cds-HJH9174720.1;Parent=gene-O5C65_004727;Dbxref=NCBI_GP:HJH9174720.1;Name=HJH9174720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750825.1;locus_tag=O5C65_004727;product=hypothetical protein;protein_id=HJH9174720.1;transl_table=11 DALFDA020000047.1 tpg gene 7249 7506 . - . ID=gene-O5C65_004728;Name=O5C65_004728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004728 DALFDA020000047.1 Protein Homology CDS 7249 7506 . - 0 ID=cds-HJH9174721.1;Parent=gene-O5C65_004728;Dbxref=NCBI_GP:HJH9174721.1;Name=HJH9174721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750826.1;locus_tag=O5C65_004728;product=hypothetical protein;protein_id=HJH9174721.1;transl_table=11 DALFDA020000047.1 tpg gene 7666 8652 . - . ID=gene-O5C65_004729;Name=O5C65_004729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004729 DALFDA020000047.1 Protein Homology CDS 7666 8652 . - 0 ID=cds-HJH9174722.1;Parent=gene-O5C65_004729;Dbxref=NCBI_GP:HJH9174722.1;Name=HJH9174722.1;Ontology_term=GO:0003697,GO:0008237,GO:0008270;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006781408.1;locus_tag=O5C65_004729;product=ArdC family protein;protein_id=HJH9174722.1;transl_table=11 DALFDA020000047.1 tpg gene 8974 9351 . - . ID=gene-O5C65_004730;Name=O5C65_004730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004730 DALFDA020000047.1 Protein Homology CDS 8974 9351 . - 0 ID=cds-HJH9174723.1;Parent=gene-O5C65_004730;Dbxref=NCBI_GP:HJH9174723.1;Name=HJH9174723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103837.1;locus_tag=O5C65_004730;product=hypothetical protein;protein_id=HJH9174723.1;transl_table=11 DALFDA020000047.1 tpg gene 9502 9939 . - . ID=gene-O5C65_004731;Name=O5C65_004731;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004731 DALFDA020000047.1 GeneMarkS-2+ CDS 9502 9939 . - 0 ID=cds-HJH9174724.1;Parent=gene-O5C65_004731;Dbxref=NCBI_GP:HJH9174724.1;Name=HJH9174724.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004731;product=hypothetical protein;protein_id=HJH9174724.1;transl_table=11 DALFDA020000047.1 tpg gene 11352 12269 . - . ID=gene-O5C65_004732;Name=O5C65_004732;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004732 DALFDA020000047.1 Protein Homology CDS 11352 12269 . - 0 ID=cds-HJH9174725.1;Parent=gene-O5C65_004732;Dbxref=NCBI_GP:HJH9174725.1;Name=HJH9174725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010846572.1;locus_tag=O5C65_004732;product=integrase domain-containing protein;protein_id=HJH9174725.1;transl_table=11 DALFDA020000047.1 tpg gene 13436 14050 . - . ID=gene-O5C65_004733;Name=O5C65_004733;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004733 DALFDA020000047.1 Protein Homology CDS 13436 14050 . - 0 ID=cds-HJH9174726.1;Parent=gene-O5C65_004733;Dbxref=NCBI_GP:HJH9174726.1;Name=HJH9174726.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022590.6;locus_tag=O5C65_004733;product=DUF2913 family protein;protein_id=HJH9174726.1;transl_table=11 DALFDA020000047.1 tpg gene 14161 14436 . - . ID=gene-O5C65_004734;Name=O5C65_004734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004734 DALFDA020000047.1 GeneMarkS-2+ CDS 14161 14436 . - 0 ID=cds-HJH9174727.1;Parent=gene-O5C65_004734;Dbxref=NCBI_GP:HJH9174727.1;Name=HJH9174727.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004734;product=hypothetical protein;protein_id=HJH9174727.1;transl_table=11 DALFDA020000047.1 tpg gene 14514 14759 . - . ID=gene-O5C65_004735;Name=O5C65_004735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004735 DALFDA020000047.1 GeneMarkS-2+ CDS 14514 14759 . - 0 ID=cds-HJH9174728.1;Parent=gene-O5C65_004735;Dbxref=NCBI_GP:HJH9174728.1;Name=HJH9174728.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004735;product=hypothetical protein;protein_id=HJH9174728.1;transl_table=11 DALFDA020000047.1 tpg gene 15058 15303 . + . ID=gene-O5C65_004736;Name=O5C65_004736;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004736 DALFDA020000047.1 Protein Homology CDS 15058 15303 . + 0 ID=cds-HJH9174729.1;Parent=gene-O5C65_004736;Dbxref=NCBI_GP:HJH9174729.1;Name=HJH9174729.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017845.6;locus_tag=O5C65_004736;product=PerC family transcriptional regulator;protein_id=HJH9174729.1;transl_table=11 DALFDA020000047.1 tpg gene 15692 16012 . - . ID=gene-O5C65_004737;Name=O5C65_004737;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004737 DALFDA020000047.1 GeneMarkS-2+ CDS 15692 16012 . - 0 ID=cds-HJH9174730.1;Parent=gene-O5C65_004737;Dbxref=NCBI_GP:HJH9174730.1;Name=HJH9174730.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004737;product=hypothetical protein;protein_id=HJH9174730.1;transl_table=11 DALFDA020000047.1 tpg gene 16251 17300 . + . ID=gene-O5C65_004738;Name=O5C65_004738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004738 DALFDA020000047.1 Protein Homology CDS 16251 17300 . + 0 ID=cds-HJH9174731.1;Parent=gene-O5C65_004738;Dbxref=NCBI_GP:HJH9174731.1;Name=HJH9174731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000093039.1;locus_tag=O5C65_004738;product=TQO small subunit DoxD;protein_id=HJH9174731.1;transl_table=11 DALFDA020000047.1 tpg gene 17795 18076 . - . ID=gene-O5C65_004739;Name=O5C65_004739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004739 DALFDA020000047.1 GeneMarkS-2+ CDS 17795 18076 . - 0 ID=cds-HJH9174732.1;Parent=gene-O5C65_004739;Dbxref=NCBI_GP:HJH9174732.1;Name=HJH9174732.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004739;product=hypothetical protein;protein_id=HJH9174732.1;transl_table=11 DALFDA020000047.1 tpg gene 18116 18688 . - . ID=gene-O5C65_004740;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=O5C65_004740 DALFDA020000047.1 Protein Homology CDS 18116 18688 . - 0 ID=cds-HJH9174733.1;Parent=gene-O5C65_004740;Dbxref=NCBI_GP:HJH9174733.1;Name=HJH9174733.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750838.1;locus_tag=O5C65_004740;product=acetate uptake transporter;protein_id=HJH9174733.1;transl_table=11 DALFDA020000047.1 tpg gene 19697 21031 . + . ID=gene-O5C65_004741;Name=O5C65_004741;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004741 DALFDA020000047.1 Protein Homology CDS 19697 21031 . + 0 ID=cds-HJH9174734.1;Parent=gene-O5C65_004741;Dbxref=NCBI_GP:HJH9174734.1;Name=HJH9174734.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750839.1;locus_tag=O5C65_004741;product=amino acid permease;protein_id=HJH9174734.1;transl_table=11 DALFDA020000047.1 tpg gene 21047 22174 . + . ID=gene-O5C65_004742;Name=O5C65_004742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004742 DALFDA020000047.1 Protein Homology CDS 21047 22174 . + 0 ID=cds-HJH9174735.1;Parent=gene-O5C65_004742;Dbxref=NCBI_GP:HJH9174735.1;Name=HJH9174735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750840.1;locus_tag=O5C65_004742;product=histidine decarboxylase;protein_id=HJH9174735.1;transl_table=11 DALFDA020000047.1 tpg gene 22272 23657 . + . ID=gene-O5C65_004743;Name=O5C65_004743;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004743 DALFDA020000047.1 Protein Homology CDS 22272 23657 . + 0 ID=cds-HJH9174736.1;Parent=gene-O5C65_004743;Dbxref=NCBI_GP:HJH9174736.1;Name=HJH9174736.1;Ontology_term=GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA;inference=COORDINATES: protein motif:HMM:NF015515.6;locus_tag=O5C65_004743;product=Na+/H+ antiporter NhaC family protein;protein_id=HJH9174736.1;transl_table=11 DALFDA020000047.1 tpg gene 23657 24448 . + . ID=gene-O5C65_004744;Name=O5C65_004744;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004744 DALFDA020000047.1 Protein Homology CDS 23657 24448 . + 0 ID=cds-HJH9174737.1;Parent=gene-O5C65_004744;Dbxref=NCBI_GP:HJH9174737.1;Name=HJH9174737.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012354.6;locus_tag=O5C65_004744;product=LysR family transcriptional regulator;protein_id=HJH9174737.1;transl_table=11 DALFDA020000047.1 tpg gene 26356 27249 . + . ID=gene-O5C65_004745;Name=O5C65_004745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004745 DALFDA020000047.1 Protein Homology CDS 26356 27249 . + 0 ID=cds-HJH9174738.1;Parent=gene-O5C65_004745;Dbxref=NCBI_GP:HJH9174738.1;Name=HJH9174738.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: protein motif:HMM:NF016362.6;locus_tag=O5C65_004745;product=restriction endonuclease;protein_id=HJH9174738.1;transl_table=11 DALFDA020000047.1 tpg gene 27627 28124 . - . ID=gene-O5C65_004746;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=O5C65_004746 DALFDA020000047.1 Protein Homology CDS 27627 28124 . - 0 ID=cds-HJH9174739.1;Parent=gene-O5C65_004746;Dbxref=NCBI_GP:HJH9174739.1;Name=HJH9174739.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750844.1;locus_tag=O5C65_004746;product=non-heme ferritin;protein_id=HJH9174739.1;transl_table=11 ##sequence-region DALFDA020000048.1 1 27892 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000048.1 tpg region 1 27892 . + . ID=DALFDA020000048.1:1..27892;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000048.1 tpg gene 1 988 . - . ID=gene-O5C65_004747;Name=O5C65_004747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004747;partial=true;start_range=.,1 DALFDA020000048.1 Protein Homology CDS 1 988 . - 0 ID=cds-HJH9174740.1;Parent=gene-O5C65_004747;Dbxref=NCBI_GP:HJH9174740.1;Name=HJH9174740.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460484.1;locus_tag=O5C65_004747;partial=true;product=aldehyde dehydrogenase family protein;protein_id=HJH9174740.1;start_range=.,1;transl_table=11 DALFDA020000048.1 tpg gene 1091 1963 . + . ID=gene-O5C65_004748;Name=ptrR;gbkey=Gene;gene=ptrR;gene_biotype=protein_coding;locus_tag=O5C65_004748 DALFDA020000048.1 Protein Homology CDS 1091 1963 . + 0 ID=cds-HJH9174741.1;Parent=gene-O5C65_004748;Dbxref=NCBI_GP:HJH9174741.1;Name=HJH9174741.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptrR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460483.1;locus_tag=O5C65_004748;product=putrescine utilization regulator PtrR;protein_id=HJH9174741.1;transl_table=11 DALFDA020000048.1 tpg gene 2079 3269 . + . ID=gene-O5C65_004749;Name=O5C65_004749;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004749 DALFDA020000048.1 Protein Homology CDS 2079 3269 . + 0 ID=cds-HJH9174742.1;Parent=gene-O5C65_004749;Dbxref=NCBI_GP:HJH9174742.1;Name=HJH9174742.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460482.1;locus_tag=O5C65_004749;product=sugar transporter;protein_id=HJH9174742.1;transl_table=11 DALFDA020000048.1 tpg gene 3317 3982 . - . ID=gene-O5C65_004750;Name=O5C65_004750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004750 DALFDA020000048.1 Protein Homology CDS 3317 3982 . - 0 ID=cds-HJH9174743.1;Parent=gene-O5C65_004750;Dbxref=NCBI_GP:HJH9174743.1;Name=HJH9174743.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460481.1;locus_tag=O5C65_004750;product=MarC family NAAT transporter;protein_id=HJH9174743.1;transl_table=11 DALFDA020000048.1 tpg gene 4241 4675 . + . ID=gene-O5C65_004751;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=O5C65_004751 DALFDA020000048.1 Protein Homology CDS 4241 4675 . + 0 ID=cds-HJH9174744.1;Parent=gene-O5C65_004751;Dbxref=NCBI_GP:HJH9174744.1;Name=HJH9174744.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460480.1;locus_tag=O5C65_004751;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=HJH9174744.1;transl_table=11 DALFDA020000048.1 tpg gene 4695 5078 . + . ID=gene-O5C65_004752;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=O5C65_004752 DALFDA020000048.1 Protein Homology CDS 4695 5078 . + 0 ID=cds-HJH9174745.1;Parent=gene-O5C65_004752;Dbxref=NCBI_GP:HJH9174745.1;Name=HJH9174745.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091194.1;locus_tag=O5C65_004752;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=HJH9174745.1;transl_table=11 DALFDA020000048.1 tpg gene 5107 5322 . + . ID=gene-O5C65_004753;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=O5C65_004753 DALFDA020000048.1 Protein Homology CDS 5107 5322 . + 0 ID=cds-HJH9174746.1;Parent=gene-O5C65_004753;Dbxref=NCBI_GP:HJH9174746.1;Name=HJH9174746.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460478.1;locus_tag=O5C65_004753;product=multiple antibiotic resistance protein MarB;protein_id=HJH9174746.1;transl_table=11 DALFDA020000048.1 tpg gene 5441 6343 . - . ID=gene-O5C65_004754;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=O5C65_004754 DALFDA020000048.1 Protein Homology CDS 5441 6343 . - 0 ID=cds-HJH9174747.1;Parent=gene-O5C65_004754;Dbxref=NCBI_GP:HJH9174747.1;Name=HJH9174747.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460477.1;locus_tag=O5C65_004754;product=O-acetylserine/cysteine exporter;protein_id=HJH9174747.1;transl_table=11 DALFDA020000048.1 tpg gene 6571 7758 . + . ID=gene-O5C65_004755;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=O5C65_004755 DALFDA020000048.1 Protein Homology CDS 6571 7758 . + 0 ID=cds-HJH9174748.1;Parent=gene-O5C65_004755;Dbxref=NCBI_GP:HJH9174748.1;Name=HJH9174748.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460476.1;locus_tag=O5C65_004755;product=efflux MFS transporter YdeE;protein_id=HJH9174748.1;transl_table=11 DALFDA020000048.1 tpg gene 8006 8101 . + . ID=gene-O5C65_004756;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=O5C65_004756 DALFDA020000048.1 Protein Homology CDS 8006 8101 . + 0 ID=cds-HJH9174749.1;Parent=gene-O5C65_004756;Dbxref=NCBI_GP:HJH9174749.1;Name=HJH9174749.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=O5C65_004756;product=protein MgtS;protein_id=HJH9174749.1;transl_table=11 DALFDA020000048.1 tpg gene 8449 8841 . - . ID=gene-O5C65_004757;Name=O5C65_004757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004757 DALFDA020000048.1 Protein Homology CDS 8449 8841 . - 0 ID=cds-HJH9174750.1;Parent=gene-O5C65_004757;Dbxref=NCBI_GP:HJH9174750.1;Name=HJH9174750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460475.1;locus_tag=O5C65_004757;product=YdeI family stress tolerance OB fold protein;protein_id=HJH9174750.1;transl_table=11 DALFDA020000048.1 tpg gene 9268 9795 . + . ID=gene-O5C65_004758;Name=O5C65_004758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004758 DALFDA020000048.1 Protein Homology CDS 9268 9795 . + 0 ID=cds-HJH9174751.1;Parent=gene-O5C65_004758;Dbxref=NCBI_GP:HJH9174751.1;Name=HJH9174751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460474.1;locus_tag=O5C65_004758;product=2-oxo-tetronate isomerase;protein_id=HJH9174751.1;transl_table=11 DALFDA020000048.1 tpg gene 9914 10096 . - . ID=gene-O5C65_004759;Name=O5C65_004759;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004759 DALFDA020000048.1 Protein Homology CDS 9914 10096 . - 0 ID=cds-HJH9174752.1;Parent=gene-O5C65_004759;Dbxref=NCBI_GP:HJH9174752.1;Name=HJH9174752.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460473.1;locus_tag=O5C65_004759;product=general stress protein;protein_id=HJH9174752.1;transl_table=11 DALFDA020000048.1 tpg gene 10441 12483 . - . ID=gene-O5C65_004760;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=O5C65_004760 DALFDA020000048.1 Protein Homology CDS 10441 12483 . - 0 ID=cds-HJH9174753.1;Parent=gene-O5C65_004760;Dbxref=NCBI_GP:HJH9174753.1;Name=HJH9174753.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460472.1;locus_tag=O5C65_004760;product=peptidyl-dipeptidase Dcp;protein_id=HJH9174753.1;transl_table=11 DALFDA020000048.1 tpg gene 12622 13368 . + . ID=gene-O5C65_004761;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=O5C65_004761 DALFDA020000048.1 Protein Homology CDS 12622 13368 . + 0 ID=cds-HJH9174754.1;Parent=gene-O5C65_004761;Dbxref=NCBI_GP:HJH9174754.1;Name=HJH9174754.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460471.1;locus_tag=O5C65_004761;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=HJH9174754.1;transl_table=11 DALFDA020000048.1 tpg gene 13498 14184 . + . ID=gene-O5C65_004762;Name=O5C65_004762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004762 DALFDA020000048.1 Protein Homology CDS 13498 14184 . + 0 ID=cds-HJH9174755.1;Parent=gene-O5C65_004762;Dbxref=NCBI_GP:HJH9174755.1;Name=HJH9174755.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460470.1;locus_tag=O5C65_004762;product=GntR family transcriptional regulator;protein_id=HJH9174755.1;transl_table=11 DALFDA020000048.1 tpg gene 14365 14568 . + . ID=gene-O5C65_004763;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=O5C65_004763 DALFDA020000048.1 Protein Homology CDS 14365 14568 . + 0 ID=cds-HJH9174756.1;Parent=gene-O5C65_004763;Dbxref=NCBI_GP:HJH9174756.1;Name=HJH9174756.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460469.1;locus_tag=O5C65_004763;product=putative selenium delivery protein YdfZ;protein_id=HJH9174756.1;transl_table=11 DALFDA020000048.1 tpg gene 14635 16101 . - . ID=gene-O5C65_004764;Name=O5C65_004764;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004764 DALFDA020000048.1 Protein Homology CDS 14635 16101 . - 0 ID=cds-HJH9174757.1;Parent=gene-O5C65_004764;Dbxref=NCBI_GP:HJH9174757.1;Name=HJH9174757.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460468.1;locus_tag=O5C65_004764;product=mannitol dehydrogenase family protein;protein_id=HJH9174757.1;transl_table=11 DALFDA020000048.1 tpg gene 16245 17624 . - . ID=gene-O5C65_004765;Name=O5C65_004765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004765 DALFDA020000048.1 Protein Homology CDS 16245 17624 . - 0 ID=cds-HJH9174758.1;Parent=gene-O5C65_004765;Dbxref=NCBI_GP:HJH9174758.1;Name=HJH9174758.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210164.1;locus_tag=O5C65_004765;product=MFS transporter;protein_id=HJH9174758.1;transl_table=11 DALFDA020000048.1 tpg gene 17678 18697 . - . ID=gene-O5C65_004766;Name=O5C65_004766;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004766 DALFDA020000048.1 Protein Homology CDS 17678 18697 . - 0 ID=cds-HJH9174759.1;Parent=gene-O5C65_004766;Dbxref=NCBI_GP:HJH9174759.1;Name=HJH9174759.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460466.1;locus_tag=O5C65_004766;product=Zn-dependent oxidoreductase;protein_id=HJH9174759.1;transl_table=11 DALFDA020000048.1 tpg gene 18708 19922 . - . ID=gene-O5C65_004767;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=O5C65_004767 DALFDA020000048.1 Protein Homology CDS 18708 19922 . - 0 ID=cds-HJH9174760.1;Parent=gene-O5C65_004767;Dbxref=NCBI_GP:HJH9174760.1;Name=HJH9174760.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=O5C65_004767;product=starvation-sensing protein RspA;protein_id=HJH9174760.1;transl_table=11 DALFDA020000048.1 tpg gene 20043 20369 . - . ID=gene-O5C65_004768;Name=O5C65_004768;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004768 DALFDA020000048.1 Protein Homology CDS 20043 20369 . - 0 ID=cds-HJH9174761.1;Parent=gene-O5C65_004768;Dbxref=NCBI_GP:HJH9174761.1;Name=HJH9174761.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460464.1;locus_tag=O5C65_004768;product=YnfA family protein;protein_id=HJH9174761.1;transl_table=11 DALFDA020000048.1 tpg gene 20522 20863 . + . ID=gene-O5C65_004769;Name=O5C65_004769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004769 DALFDA020000048.1 Protein Homology CDS 20522 20863 . + 0 ID=cds-HJH9174762.1;Parent=gene-O5C65_004769;Dbxref=NCBI_GP:HJH9174762.1;Name=HJH9174762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460463.1;locus_tag=O5C65_004769;product=DUF1283 family protein;protein_id=HJH9174762.1;transl_table=11 DALFDA020000048.1 tpg gene 20899 21459 . + . ID=gene-O5C65_004770;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=O5C65_004770 DALFDA020000048.1 Protein Homology CDS 20899 21459 . + 0 ID=cds-HJH9174763.1;Parent=gene-O5C65_004770;Dbxref=NCBI_GP:HJH9174763.1;Name=HJH9174763.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460462.1;locus_tag=O5C65_004770;product=spermidine N1-acetyltransferase;protein_id=HJH9174763.1;transl_table=11 DALFDA020000048.1 tpg gene 21500 22210 . - . ID=gene-O5C65_004771;Name=O5C65_004771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004771 DALFDA020000048.1 Protein Homology CDS 21500 22210 . - 0 ID=cds-HJH9174764.1;Parent=gene-O5C65_004771;Dbxref=NCBI_GP:HJH9174764.1;Name=HJH9174764.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465701.1;locus_tag=O5C65_004771;product=YnfC family lipoprotein;protein_id=HJH9174764.1;transl_table=11 DALFDA020000048.1 tpg gene 22314 22622 . + . ID=gene-O5C65_004772;Name=O5C65_004772;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004772 DALFDA020000048.1 Protein Homology CDS 22314 22622 . + 0 ID=cds-HJH9174765.1;Parent=gene-O5C65_004772;Dbxref=NCBI_GP:HJH9174765.1;Name=HJH9174765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460460.1;locus_tag=O5C65_004772;product=DUF1161 domain-containing protein;protein_id=HJH9174765.1;transl_table=11 DALFDA020000048.1 tpg gene 22779 25217 . + . ID=gene-O5C65_004773;Name=ynfE;gbkey=Gene;gene=ynfE;gene_biotype=protein_coding;locus_tag=O5C65_004773 DALFDA020000048.1 Protein Homology CDS 22779 25217 . + 0 ID=cds-HJH9174766.1;Parent=gene-O5C65_004773;Dbxref=NCBI_GP:HJH9174766.1;Name=HJH9174766.1;gbkey=CDS;gene=ynfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006788576.1;locus_tag=O5C65_004773;product=selenate/tellurate reductase subunit YnfE;protein_id=HJH9174766.1;transl_table=11 DALFDA020000048.1 tpg gene 25316 27751 . + . ID=gene-O5C65_004774;Name=ynfF;gbkey=Gene;gene=ynfF;gene_biotype=protein_coding;locus_tag=O5C65_004774 DALFDA020000048.1 Protein Homology CDS 25316 27751 . + 0 ID=cds-HJH9174767.1;Parent=gene-O5C65_004774;Dbxref=NCBI_GP:HJH9174767.1;Name=HJH9174767.1;gbkey=CDS;gene=ynfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460458.1;locus_tag=O5C65_004774;product=selenate/tellurate reductase subunit YnfF;protein_id=HJH9174767.1;transl_table=11 DALFDA020000048.1 tpg gene 27762 27892 . + . ID=gene-O5C65_004775;Name=O5C65_004775;end_range=27892,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004775;partial=true DALFDA020000048.1 Protein Homology CDS 27762 27892 . + 0 ID=cds-HJH9174768.1;Parent=gene-O5C65_004775;Dbxref=NCBI_GP:HJH9174768.1;Name=HJH9174768.1;end_range=27892,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=O5C65_004775;partial=true;product=4Fe-4S binding protein;protein_id=HJH9174768.1;transl_table=11 ##sequence-region DALFDA020000049.1 1 26440 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000049.1 tpg region 1 26440 . + . ID=DALFDA020000049.1:1..26440;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000049.1 tpg gene 190 342 . - . ID=gene-O5C65_004776;Name=O5C65_004776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004776 DALFDA020000049.1 GeneMarkS-2+ CDS 190 342 . - 0 ID=cds-HJH9174769.1;Parent=gene-O5C65_004776;Dbxref=NCBI_GP:HJH9174769.1;Name=HJH9174769.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004776;product=hypothetical protein;protein_id=HJH9174769.1;transl_table=11 DALFDA020000049.1 tpg gene 456 1010 . + . ID=gene-O5C65_004777;Name=O5C65_004777;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004777 DALFDA020000049.1 Protein Homology CDS 456 1010 . + 0 ID=cds-HJH9174770.1;Parent=gene-O5C65_004777;Dbxref=NCBI_GP:HJH9174770.1;Name=HJH9174770.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462303.1;locus_tag=O5C65_004777;product=gamma carbonic anhydrase family protein;protein_id=HJH9174770.1;transl_table=11 DALFDA020000049.1 tpg gene 986 1243 . - . ID=gene-O5C65_004778;Name=O5C65_004778;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004778 DALFDA020000049.1 Protein Homology CDS 986 1243 . - 0 ID=cds-HJH9174771.1;Parent=gene-O5C65_004778;Dbxref=NCBI_GP:HJH9174771.1;Name=HJH9174771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462304.1;locus_tag=O5C65_004778;product=DUF1488 domain-containing protein;protein_id=HJH9174771.1;transl_table=11 DALFDA020000049.1 tpg gene 1240 2058 . - . ID=gene-O5C65_004779;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=O5C65_004779 DALFDA020000049.1 Protein Homology CDS 1240 2058 . - 0 ID=cds-HJH9174772.1;Parent=gene-O5C65_004779;Dbxref=NCBI_GP:HJH9174772.1;Name=HJH9174772.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462305.1;locus_tag=O5C65_004779;product=shikimate dehydrogenase;protein_id=HJH9174772.1;transl_table=11 DALFDA020000049.1 tpg gene 2063 2635 . - . ID=gene-O5C65_004780;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=O5C65_004780 DALFDA020000049.1 Protein Homology CDS 2063 2635 . - 0 ID=cds-HJH9174773.1;Parent=gene-O5C65_004780;Dbxref=NCBI_GP:HJH9174773.1;Name=HJH9174773.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462306.1;locus_tag=O5C65_004780;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=HJH9174773.1;transl_table=11 DALFDA020000049.1 tpg gene 2640 3182 . - . ID=gene-O5C65_004781;Name=O5C65_004781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004781 DALFDA020000049.1 Protein Homology CDS 2640 3182 . - 0 ID=cds-HJH9174774.1;Parent=gene-O5C65_004781;Dbxref=NCBI_GP:HJH9174774.1;Name=HJH9174774.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462307.1;locus_tag=O5C65_004781;product=topoisomerase DNA-binding C4 zinc finger domain-containing protein;protein_id=HJH9174774.1;transl_table=11 DALFDA020000049.1 tpg gene 3209 3682 . - . ID=gene-O5C65_004782;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=O5C65_004782 DALFDA020000049.1 Protein Homology CDS 3209 3682 . - 0 ID=cds-HJH9174775.1;Parent=gene-O5C65_004782;Dbxref=NCBI_GP:HJH9174775.1;Name=HJH9174775.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=O5C65_004782;product=DUF494 family protein Smg;protein_id=HJH9174775.1;transl_table=11 DALFDA020000049.1 tpg gene 3654 4778 . - . ID=gene-O5C65_004783;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=O5C65_004783 DALFDA020000049.1 Protein Homology CDS 3654 4778 . - 0 ID=cds-HJH9174776.1;Parent=gene-O5C65_004783;Dbxref=NCBI_GP:HJH9174776.1;Name=HJH9174776.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462309.1;locus_tag=O5C65_004783;product=DNA-protecting protein DprA;protein_id=HJH9174776.1;transl_table=11 DALFDA020000049.1 tpg gene 4910 5419 . + . ID=gene-O5C65_004784;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=O5C65_004784 DALFDA020000049.1 Protein Homology CDS 4910 5419 . + 0 ID=cds-HJH9174777.1;Parent=gene-O5C65_004784;Dbxref=NCBI_GP:HJH9174777.1;Name=HJH9174777.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462310.1;locus_tag=O5C65_004784;product=peptide deformylase;protein_id=HJH9174777.1;transl_table=11 DALFDA020000049.1 tpg gene 5435 6382 . + . ID=gene-O5C65_004785;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=O5C65_004785 DALFDA020000049.1 Protein Homology CDS 5435 6382 . + 0 ID=cds-HJH9174778.1;Parent=gene-O5C65_004785;Dbxref=NCBI_GP:HJH9174778.1;Name=HJH9174778.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462311.1;locus_tag=O5C65_004785;product=methionyl-tRNA formyltransferase;protein_id=HJH9174778.1;transl_table=11 DALFDA020000049.1 tpg gene 6434 7723 . + . ID=gene-O5C65_004786;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=O5C65_004786 DALFDA020000049.1 Protein Homology CDS 6434 7723 . + 0 ID=cds-HJH9174779.1;Parent=gene-O5C65_004786;Dbxref=NCBI_GP:HJH9174779.1;Name=HJH9174779.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462312.1;locus_tag=O5C65_004786;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=HJH9174779.1;transl_table=11 DALFDA020000049.1 tpg gene 7745 9121 . + . ID=gene-O5C65_004787;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=O5C65_004787 DALFDA020000049.1 Protein Homology CDS 7745 9121 . + 0 ID=cds-HJH9174780.1;Parent=gene-O5C65_004787;Dbxref=NCBI_GP:HJH9174780.1;Name=HJH9174780.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=O5C65_004787;product=Trk system potassium transporter TrkA;protein_id=HJH9174780.1;transl_table=11 DALFDA020000049.1 tpg gene 9263 9676 . + . ID=gene-O5C65_004788;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=O5C65_004788 DALFDA020000049.1 Protein Homology CDS 9263 9676 . + 0 ID=cds-HJH9174781.1;Parent=gene-O5C65_004788;Dbxref=NCBI_GP:HJH9174781.1;Name=HJH9174781.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462314.1;locus_tag=O5C65_004788;product=large-conductance mechanosensitive channel protein MscL;protein_id=HJH9174781.1;transl_table=11 DALFDA020000049.1 tpg pseudogene 9678 9881 . - . ID=gene-O5C65_004789;Name=O5C65_004789;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004789;pseudo=true DALFDA020000049.1 Protein Homology CDS 9678 9881 . - 0 ID=cds-O5C65_004789;Parent=gene-O5C65_004789;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588467.1;locus_tag=O5C65_004789;product=alternative ribosome-rescue factor A;pseudo=true;transl_table=11 DALFDA020000049.1 tpg gene 9939 10364 . - . ID=gene-O5C65_004790;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=O5C65_004790 DALFDA020000049.1 Protein Homology CDS 9939 10364 . - 0 ID=cds-HJH9174782.1;Parent=gene-O5C65_004790;Dbxref=NCBI_GP:HJH9174782.1;Name=HJH9174782.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462316.1;locus_tag=O5C65_004790;product=Zn(2+)-responsive transcriptional regulator;protein_id=HJH9174782.1;transl_table=11 DALFDA020000049.1 tpg gene 10375 10743 . - . ID=gene-O5C65_004791;Name=O5C65_004791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004791 DALFDA020000049.1 Protein Homology CDS 10375 10743 . - 0 ID=cds-HJH9174783.1;Parent=gene-O5C65_004791;Dbxref=NCBI_GP:HJH9174783.1;Name=HJH9174783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462317.1;locus_tag=O5C65_004791;product=DUF1992 domain-containing protein;protein_id=HJH9174783.1;transl_table=11 DALFDA020000049.1 tpg gene 10851 11234 . - . ID=gene-O5C65_004792;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=O5C65_004792 DALFDA020000049.1 Protein Homology CDS 10851 11234 . - 0 ID=cds-HJH9174784.1;Parent=gene-O5C65_004792;Dbxref=NCBI_GP:HJH9174784.1;Name=HJH9174784.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462318.1;locus_tag=O5C65_004792;product=50S ribosomal protein L17;protein_id=HJH9174784.1;transl_table=11 DALFDA020000049.1 tpg gene 11275 12264 . - . ID=gene-O5C65_004793;Name=O5C65_004793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004793 DALFDA020000049.1 Protein Homology CDS 11275 12264 . - 0 ID=cds-HJH9174785.1;Parent=gene-O5C65_004793;Dbxref=NCBI_GP:HJH9174785.1;Name=HJH9174785.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=O5C65_004793;product=DNA-directed RNA polymerase subunit alpha;protein_id=HJH9174785.1;transl_table=11 DALFDA020000049.1 tpg gene 12290 12910 . - . ID=gene-O5C65_004794;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=O5C65_004794 DALFDA020000049.1 Protein Homology CDS 12290 12910 . - 0 ID=cds-HJH9174786.1;Parent=gene-O5C65_004794;Dbxref=NCBI_GP:HJH9174786.1;Name=HJH9174786.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=O5C65_004794;product=30S ribosomal protein S4;protein_id=HJH9174786.1;transl_table=11 DALFDA020000049.1 tpg gene 12944 13333 . - . ID=gene-O5C65_004795;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=O5C65_004795 DALFDA020000049.1 Protein Homology CDS 12944 13333 . - 0 ID=cds-HJH9174787.1;Parent=gene-O5C65_004795;Dbxref=NCBI_GP:HJH9174787.1;Name=HJH9174787.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=O5C65_004795;product=30S ribosomal protein S11;protein_id=HJH9174787.1;transl_table=11 DALFDA020000049.1 tpg gene 13350 13706 . - . ID=gene-O5C65_004796;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=O5C65_004796 DALFDA020000049.1 Protein Homology CDS 13350 13706 . - 0 ID=cds-HJH9174788.1;Parent=gene-O5C65_004796;Dbxref=NCBI_GP:HJH9174788.1;Name=HJH9174788.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=O5C65_004796;product=30S ribosomal protein S13;protein_id=HJH9174788.1;transl_table=11 DALFDA020000049.1 tpg gene 13853 13969 . - . ID=gene-O5C65_004797;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=O5C65_004797 DALFDA020000049.1 Protein Homology CDS 13853 13969 . - 0 ID=cds-HJH9174789.1;Parent=gene-O5C65_004797;Dbxref=NCBI_GP:HJH9174789.1;Name=HJH9174789.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=O5C65_004797;product=50S ribosomal protein L36;protein_id=HJH9174789.1;transl_table=11 DALFDA020000049.1 tpg gene 14001 15332 . - . ID=gene-O5C65_004798;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=O5C65_004798 DALFDA020000049.1 Protein Homology CDS 14001 15332 . - 0 ID=cds-HJH9174790.1;Parent=gene-O5C65_004798;Dbxref=NCBI_GP:HJH9174790.1;Name=HJH9174790.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=O5C65_004798;product=preprotein translocase subunit SecY;protein_id=HJH9174790.1;transl_table=11 DALFDA020000049.1 tpg gene 15340 15774 . - . ID=gene-O5C65_004799;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=O5C65_004799 DALFDA020000049.1 Protein Homology CDS 15340 15774 . - 0 ID=cds-HJH9174791.1;Parent=gene-O5C65_004799;Dbxref=NCBI_GP:HJH9174791.1;Name=HJH9174791.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=O5C65_004799;product=50S ribosomal protein L15;protein_id=HJH9174791.1;transl_table=11 DALFDA020000049.1 tpg gene 15778 15957 . - . ID=gene-O5C65_004800;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=O5C65_004800 DALFDA020000049.1 Protein Homology CDS 15778 15957 . - 0 ID=cds-HJH9174792.1;Parent=gene-O5C65_004800;Dbxref=NCBI_GP:HJH9174792.1;Name=HJH9174792.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=O5C65_004800;product=50S ribosomal protein L30;protein_id=HJH9174792.1;transl_table=11 DALFDA020000049.1 tpg gene 15961 16464 . - . ID=gene-O5C65_004801;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=O5C65_004801 DALFDA020000049.1 Protein Homology CDS 15961 16464 . - 0 ID=cds-HJH9174793.1;Parent=gene-O5C65_004801;Dbxref=NCBI_GP:HJH9174793.1;Name=HJH9174793.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=O5C65_004801;product=30S ribosomal protein S5;protein_id=HJH9174793.1;transl_table=11 DALFDA020000049.1 tpg gene 16479 16832 . - . ID=gene-O5C65_004802;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=O5C65_004802 DALFDA020000049.1 Protein Homology CDS 16479 16832 . - 0 ID=cds-HJH9174794.1;Parent=gene-O5C65_004802;Dbxref=NCBI_GP:HJH9174794.1;Name=HJH9174794.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=O5C65_004802;product=50S ribosomal protein L18;protein_id=HJH9174794.1;transl_table=11 DALFDA020000049.1 tpg gene 16842 17375 . - . ID=gene-O5C65_004803;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=O5C65_004803 DALFDA020000049.1 Protein Homology CDS 16842 17375 . - 0 ID=cds-HJH9174795.1;Parent=gene-O5C65_004803;Dbxref=NCBI_GP:HJH9174795.1;Name=HJH9174795.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=O5C65_004803;product=50S ribosomal protein L6;protein_id=HJH9174795.1;transl_table=11 DALFDA020000049.1 tpg gene 17388 17780 . - . ID=gene-O5C65_004804;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=O5C65_004804 DALFDA020000049.1 Protein Homology CDS 17388 17780 . - 0 ID=cds-HJH9174796.1;Parent=gene-O5C65_004804;Dbxref=NCBI_GP:HJH9174796.1;Name=HJH9174796.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=O5C65_004804;product=30S ribosomal protein S8;protein_id=HJH9174796.1;transl_table=11 DALFDA020000049.1 tpg gene 17814 18119 . - . ID=gene-O5C65_004805;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=O5C65_004805 DALFDA020000049.1 Protein Homology CDS 17814 18119 . - 0 ID=cds-HJH9174797.1;Parent=gene-O5C65_004805;Dbxref=NCBI_GP:HJH9174797.1;Name=HJH9174797.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462331.3;locus_tag=O5C65_004805;product=30S ribosomal protein S14;protein_id=HJH9174797.1;transl_table=11 DALFDA020000049.1 tpg gene 18134 18673 . - . ID=gene-O5C65_004806;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=O5C65_004806 DALFDA020000049.1 Protein Homology CDS 18134 18673 . - 0 ID=cds-HJH9174798.1;Parent=gene-O5C65_004806;Dbxref=NCBI_GP:HJH9174798.1;Name=HJH9174798.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=O5C65_004806;product=50S ribosomal protein L5;protein_id=HJH9174798.1;transl_table=11 DALFDA020000049.1 tpg gene 18688 19002 . - . ID=gene-O5C65_004807;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=O5C65_004807 DALFDA020000049.1 Protein Homology CDS 18688 19002 . - 0 ID=cds-HJH9174799.1;Parent=gene-O5C65_004807;Dbxref=NCBI_GP:HJH9174799.1;Name=HJH9174799.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=O5C65_004807;product=50S ribosomal protein L24;protein_id=HJH9174799.1;transl_table=11 DALFDA020000049.1 tpg gene 19013 19384 . - . ID=gene-O5C65_004808;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=O5C65_004808 DALFDA020000049.1 Protein Homology CDS 19013 19384 . - 0 ID=cds-HJH9174800.1;Parent=gene-O5C65_004808;Dbxref=NCBI_GP:HJH9174800.1;Name=HJH9174800.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005501250.1;locus_tag=O5C65_004808;product=50S ribosomal protein L14;protein_id=HJH9174800.1;transl_table=11 DALFDA020000049.1 tpg gene 19548 19802 . - . ID=gene-O5C65_004809;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=O5C65_004809 DALFDA020000049.1 Protein Homology CDS 19548 19802 . - 0 ID=cds-HJH9174801.1;Parent=gene-O5C65_004809;Dbxref=NCBI_GP:HJH9174801.1;Name=HJH9174801.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=O5C65_004809;product=30S ribosomal protein S17;protein_id=HJH9174801.1;transl_table=11 DALFDA020000049.1 tpg gene 19802 19993 . - . ID=gene-O5C65_004810;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=O5C65_004810 DALFDA020000049.1 Protein Homology CDS 19802 19993 . - 0 ID=cds-HJH9174802.1;Parent=gene-O5C65_004810;Dbxref=NCBI_GP:HJH9174802.1;Name=HJH9174802.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=O5C65_004810;product=50S ribosomal protein L29;protein_id=HJH9174802.1;transl_table=11 DALFDA020000049.1 tpg gene 19993 20403 . - . ID=gene-O5C65_004811;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=O5C65_004811 DALFDA020000049.1 Protein Homology CDS 19993 20403 . - 0 ID=cds-HJH9174803.1;Parent=gene-O5C65_004811;Dbxref=NCBI_GP:HJH9174803.1;Name=HJH9174803.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=O5C65_004811;product=50S ribosomal protein L16;protein_id=HJH9174803.1;transl_table=11 DALFDA020000049.1 tpg gene 20416 21117 . - . ID=gene-O5C65_004812;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=O5C65_004812 DALFDA020000049.1 Protein Homology CDS 20416 21117 . - 0 ID=cds-HJH9174804.1;Parent=gene-O5C65_004812;Dbxref=NCBI_GP:HJH9174804.1;Name=HJH9174804.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=O5C65_004812;product=30S ribosomal protein S3;protein_id=HJH9174804.1;transl_table=11 DALFDA020000049.1 tpg gene 21135 21467 . - . ID=gene-O5C65_004813;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=O5C65_004813 DALFDA020000049.1 Protein Homology CDS 21135 21467 . - 0 ID=cds-HJH9174805.1;Parent=gene-O5C65_004813;Dbxref=NCBI_GP:HJH9174805.1;Name=HJH9174805.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=O5C65_004813;product=50S ribosomal protein L22;protein_id=HJH9174805.1;transl_table=11 DALFDA020000049.1 tpg gene 21482 21760 . - . ID=gene-O5C65_004814;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=O5C65_004814 DALFDA020000049.1 Protein Homology CDS 21482 21760 . - 0 ID=cds-HJH9174806.1;Parent=gene-O5C65_004814;Dbxref=NCBI_GP:HJH9174806.1;Name=HJH9174806.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=O5C65_004814;product=30S ribosomal protein S19;protein_id=HJH9174806.1;transl_table=11 DALFDA020000049.1 tpg gene 21777 22598 . - . ID=gene-O5C65_004815;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=O5C65_004815 DALFDA020000049.1 Protein Homology CDS 21777 22598 . - 0 ID=cds-HJH9174807.1;Parent=gene-O5C65_004815;Dbxref=NCBI_GP:HJH9174807.1;Name=HJH9174807.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=O5C65_004815;product=50S ribosomal protein L2;protein_id=HJH9174807.1;transl_table=11 DALFDA020000049.1 tpg gene 22616 22918 . - . ID=gene-O5C65_004816;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=O5C65_004816 DALFDA020000049.1 Protein Homology CDS 22616 22918 . - 0 ID=cds-HJH9174808.1;Parent=gene-O5C65_004816;Dbxref=NCBI_GP:HJH9174808.1;Name=HJH9174808.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=O5C65_004816;product=50S ribosomal protein L23;protein_id=HJH9174808.1;transl_table=11 DALFDA020000049.1 tpg gene 22915 23520 . - . ID=gene-O5C65_004817;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=O5C65_004817 DALFDA020000049.1 Protein Homology CDS 22915 23520 . - 0 ID=cds-HJH9174809.1;Parent=gene-O5C65_004817;Dbxref=NCBI_GP:HJH9174809.1;Name=HJH9174809.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=O5C65_004817;product=50S ribosomal protein L4;protein_id=HJH9174809.1;transl_table=11 DALFDA020000049.1 tpg gene 23531 24160 . - . ID=gene-O5C65_004818;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=O5C65_004818 DALFDA020000049.1 Protein Homology CDS 23531 24160 . - 0 ID=cds-HJH9174810.1;Parent=gene-O5C65_004818;Dbxref=NCBI_GP:HJH9174810.1;Name=HJH9174810.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=O5C65_004818;product=50S ribosomal protein L3;protein_id=HJH9174810.1;transl_table=11 DALFDA020000049.1 tpg gene 24193 24504 . - . ID=gene-O5C65_004819;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=O5C65_004819 DALFDA020000049.1 Protein Homology CDS 24193 24504 . - 0 ID=cds-HJH9174811.1;Parent=gene-O5C65_004819;Dbxref=NCBI_GP:HJH9174811.1;Name=HJH9174811.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=O5C65_004819;product=30S ribosomal protein S10;protein_id=HJH9174811.1;transl_table=11 DALFDA020000049.1 tpg gene 24884 25351 . + . ID=gene-O5C65_004820;Name=hopD;gbkey=Gene;gene=hopD;gene_biotype=protein_coding;locus_tag=O5C65_004820 DALFDA020000049.1 Protein Homology CDS 24884 25351 . + 0 ID=cds-HJH9174812.1;Parent=gene-O5C65_004820;Dbxref=NCBI_GP:HJH9174812.1;Name=HJH9174812.1;gbkey=CDS;gene=hopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462346.1;locus_tag=O5C65_004820;product=leader peptidase HopD;protein_id=HJH9174812.1;transl_table=11 DALFDA020000049.1 tpg gene 25348 25824 . - . ID=gene-O5C65_004821;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=O5C65_004821 DALFDA020000049.1 Protein Homology CDS 25348 25824 . - 0 ID=cds-HJH9174813.1;Parent=gene-O5C65_004821;Dbxref=NCBI_GP:HJH9174813.1;Name=HJH9174813.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462347.1;locus_tag=O5C65_004821;product=bacterioferritin;protein_id=HJH9174813.1;transl_table=11 DALFDA020000049.1 tpg gene 25897 26091 . - . ID=gene-O5C65_004822;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=O5C65_004822 DALFDA020000049.1 Protein Homology CDS 25897 26091 . - 0 ID=cds-HJH9174814.1;Parent=gene-O5C65_004822;Dbxref=NCBI_GP:HJH9174814.1;Name=HJH9174814.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462348.1;locus_tag=O5C65_004822;product=bacterioferritin-associated ferredoxin;protein_id=HJH9174814.1;transl_table=11 DALFDA020000049.1 tpg gene 26276 26440 . - . ID=gene-O5C65_004823;Name=tuf;end_range=26440,.;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=O5C65_004823;partial=true DALFDA020000049.1 Protein Homology CDS 26276 26440 . - 0 ID=cds-HJH9174815.1;Parent=gene-O5C65_004823;Dbxref=NCBI_GP:HJH9174815.1;Name=HJH9174815.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;end_range=26440,.;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=O5C65_004823;partial=true;product=elongation factor Tu;protein_id=HJH9174815.1;transl_table=11 ##sequence-region DALFDA020000050.1 1 24573 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000050.1 tpg region 1 24573 . + . ID=DALFDA020000050.1:1..24573;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000050.1 tpg gene 1 316 . + . ID=gene-O5C65_004824;Name=O5C65_004824;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004824;partial=true;start_range=.,1 DALFDA020000050.1 Protein Homology CDS 1 316 . + 1 ID=cds-HJH9174816.1;Parent=gene-O5C65_004824;Dbxref=NCBI_GP:HJH9174816.1;Name=HJH9174816.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012422.6;locus_tag=O5C65_004824;partial=true;product=helix-turn-helix domain-containing protein;protein_id=HJH9174816.1;start_range=.,1;transl_table=11 DALFDA020000050.1 tpg gene 344 1273 . - . ID=gene-O5C65_004825;Name=O5C65_004825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004825 DALFDA020000050.1 Protein Homology CDS 344 1273 . - 0 ID=cds-HJH9174817.1;Parent=gene-O5C65_004825;Dbxref=NCBI_GP:HJH9174817.1;Name=HJH9174817.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001560553.1;locus_tag=O5C65_004825;product=transketolase family protein;protein_id=HJH9174817.1;transl_table=11 DALFDA020000050.1 tpg gene 1283 1999 . - . ID=gene-O5C65_004826;Name=O5C65_004826;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004826 DALFDA020000050.1 Protein Homology CDS 1283 1999 . - 0 ID=cds-HJH9174818.1;Parent=gene-O5C65_004826;Dbxref=NCBI_GP:HJH9174818.1;Name=HJH9174818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001560552.1;locus_tag=O5C65_004826;product=transketolase;protein_id=HJH9174818.1;transl_table=11 DALFDA020000050.1 tpg gene 1992 3128 . - . ID=gene-O5C65_004827;Name=O5C65_004827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004827 DALFDA020000050.1 Protein Homology CDS 1992 3128 . - 0 ID=cds-HJH9174819.1;Parent=gene-O5C65_004827;Dbxref=NCBI_GP:HJH9174819.1;Name=HJH9174819.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.6;locus_tag=O5C65_004827;product=MFS transporter;protein_id=HJH9174819.1;transl_table=11 DALFDA020000050.1 tpg gene 3159 3854 . - . ID=gene-O5C65_004828;Name=O5C65_004828;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004828 DALFDA020000050.1 GeneMarkS-2+ CDS 3159 3854 . - 0 ID=cds-HJH9174820.1;Parent=gene-O5C65_004828;Dbxref=NCBI_GP:HJH9174820.1;Name=HJH9174820.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004828;product=HAD family hydrolase;protein_id=HJH9174820.1;transl_table=11 DALFDA020000050.1 tpg gene 3867 5084 . - . ID=gene-O5C65_004829;Name=O5C65_004829;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004829 DALFDA020000050.1 Protein Homology CDS 3867 5084 . - 0 ID=cds-HJH9174821.1;Parent=gene-O5C65_004829;Dbxref=NCBI_GP:HJH9174821.1;Name=HJH9174821.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: protein motif:HMM:NF005589.0;locus_tag=O5C65_004829;product=beta-ketoacyl-[acyl-carrier-protein] synthase family protein;protein_id=HJH9174821.1;transl_table=11 DALFDA020000050.1 tpg gene 5114 5329 . - . ID=gene-O5C65_004830;Name=O5C65_004830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004830 DALFDA020000050.1 Protein Homology CDS 5114 5329 . - 0 ID=cds-HJH9174822.1;Parent=gene-O5C65_004830;Dbxref=NCBI_GP:HJH9174822.1;Name=HJH9174822.1;Ontology_term=GO:0006633,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: protein motif:HMM:NF049449.1;locus_tag=O5C65_004830;product=acyl carrier protein;protein_id=HJH9174822.1;transl_table=11 DALFDA020000050.1 tpg gene 5317 6228 . - . ID=gene-O5C65_004831;Name=O5C65_004831;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004831 DALFDA020000050.1 Protein Homology CDS 5317 6228 . - 0 ID=cds-HJH9174823.1;Parent=gene-O5C65_004831;Dbxref=NCBI_GP:HJH9174823.1;Name=HJH9174823.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015700.6;locus_tag=O5C65_004831;product=AfsA-related hotdog domain-containing protein;protein_id=HJH9174823.1;transl_table=11 DALFDA020000050.1 tpg gene 6700 7959 . - . ID=gene-O5C65_004832;Name=O5C65_004832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004832 DALFDA020000050.1 Protein Homology CDS 6700 7959 . - 0 ID=cds-HJH9174824.1;Parent=gene-O5C65_004832;Dbxref=NCBI_GP:HJH9174824.1;Name=HJH9174824.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001219011.1;locus_tag=O5C65_004832;product=tyrosine-type recombinase/integrase;protein_id=HJH9174824.1;transl_table=11 DALFDA020000050.1 tpg gene 8520 9137 . + . ID=gene-O5C65_004833;Name=O5C65_004833;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004833 DALFDA020000050.1 Protein Homology CDS 8520 9137 . + 0 ID=cds-HJH9174825.1;Parent=gene-O5C65_004833;Dbxref=NCBI_GP:HJH9174825.1;Name=HJH9174825.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024685.6;locus_tag=O5C65_004833;product=SIR2 family protein;protein_id=HJH9174825.1;transl_table=11 DALFDA020000050.1 tpg gene 9159 10382 . + . ID=gene-O5C65_004834;Name=O5C65_004834;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004834 DALFDA020000050.1 GeneMarkS-2+ CDS 9159 10382 . + 0 ID=cds-HJH9174826.1;Parent=gene-O5C65_004834;Dbxref=NCBI_GP:HJH9174826.1;Name=HJH9174826.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004834;product=hypothetical protein;protein_id=HJH9174826.1;transl_table=11 DALFDA020000050.1 tpg gene 10379 11836 . + . ID=gene-O5C65_004835;Name=O5C65_004835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004835 DALFDA020000050.1 Protein Homology CDS 10379 11836 . + 0 ID=cds-HJH9174827.1;Parent=gene-O5C65_004835;Dbxref=NCBI_GP:HJH9174827.1;Name=HJH9174827.1;Ontology_term=GO:0003676,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017346485.1;locus_tag=O5C65_004835;product=argonaute/piwi family protein;protein_id=HJH9174827.1;transl_table=11 DALFDA020000050.1 tpg gene 12228 12315 . - . ID=gene-O5C65_004836;Name=O5C65_004836;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_004836 DALFDA020000050.1 tRNAscan-SE tRNA 12228 12315 . - . ID=rna-O5C65_004836;Parent=gene-O5C65_004836;anticodon=(pos:complement(12279..12281));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004836;product=tRNA-Ser DALFDA020000050.1 tRNAscan-SE exon 12228 12315 . - . ID=exon-O5C65_004836-1;Parent=rna-O5C65_004836;anticodon=(pos:complement(12279..12281));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004836;product=tRNA-Ser DALFDA020000050.1 tpg gene 12464 13141 . - . ID=gene-O5C65_004837;Name=O5C65_004837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004837 DALFDA020000050.1 Protein Homology CDS 12464 13141 . - 0 ID=cds-HJH9174828.1;Parent=gene-O5C65_004837;Dbxref=NCBI_GP:HJH9174828.1;Name=HJH9174828.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459926.1;locus_tag=O5C65_004837;product=hydrolase;protein_id=HJH9174828.1;transl_table=11 DALFDA020000050.1 tpg gene 13161 14021 . - . ID=gene-O5C65_004838;Name=O5C65_004838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004838 DALFDA020000050.1 Protein Homology CDS 13161 14021 . - 0 ID=cds-HJH9174829.1;Parent=gene-O5C65_004838;Dbxref=NCBI_GP:HJH9174829.1;Name=HJH9174829.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459927.1;locus_tag=O5C65_004838;product=pirin family protein;protein_id=HJH9174829.1;transl_table=11 DALFDA020000050.1 tpg gene 14130 15041 . + . ID=gene-O5C65_004839;Name=O5C65_004839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004839 DALFDA020000050.1 Protein Homology CDS 14130 15041 . + 0 ID=cds-HJH9174830.1;Parent=gene-O5C65_004839;Dbxref=NCBI_GP:HJH9174830.1;Name=HJH9174830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459928.1;locus_tag=O5C65_004839;product=LysR family transcriptional regulator;protein_id=HJH9174830.1;transl_table=11 DALFDA020000050.1 tpg gene 15132 15350 . - . ID=gene-O5C65_004840;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=O5C65_004840 DALFDA020000050.1 Protein Homology CDS 15132 15350 . - 0 ID=cds-HJH9174831.1;Parent=gene-O5C65_004840;Dbxref=NCBI_GP:HJH9174831.1;Name=HJH9174831.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=O5C65_004840;product=translation initiation factor IF-1;protein_id=HJH9174831.1;transl_table=11 DALFDA020000050.1 tpg gene 15662 16366 . - . ID=gene-O5C65_004841;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=O5C65_004841 DALFDA020000050.1 Protein Homology CDS 15662 16366 . - 0 ID=cds-HJH9174832.1;Parent=gene-O5C65_004841;Dbxref=NCBI_GP:HJH9174832.1;Name=HJH9174832.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459931.1;locus_tag=O5C65_004841;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=HJH9174832.1;transl_table=11 DALFDA020000050.1 tpg gene 16411 18132 . - . ID=gene-O5C65_004842;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=O5C65_004842 DALFDA020000050.1 Protein Homology CDS 16411 18132 . - 0 ID=cds-HJH9174833.1;Parent=gene-O5C65_004842;Dbxref=NCBI_GP:HJH9174833.1;Name=HJH9174833.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459932.1;locus_tag=O5C65_004842;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=HJH9174833.1;transl_table=11 DALFDA020000050.1 tpg gene 18133 19899 . - . ID=gene-O5C65_004843;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=O5C65_004843 DALFDA020000050.1 Protein Homology CDS 18133 19899 . - 0 ID=cds-HJH9174834.1;Parent=gene-O5C65_004843;Dbxref=NCBI_GP:HJH9174834.1;Name=HJH9174834.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459933.1;locus_tag=O5C65_004843;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=HJH9174834.1;transl_table=11 DALFDA020000050.1 tpg gene 20013 20981 . - . ID=gene-O5C65_004844;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=O5C65_004844 DALFDA020000050.1 Protein Homology CDS 20013 20981 . - 0 ID=cds-HJH9174835.1;Parent=gene-O5C65_004844;Dbxref=NCBI_GP:HJH9174835.1;Name=HJH9174835.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459934.1;locus_tag=O5C65_004844;product=thioredoxin-disulfide reductase;protein_id=HJH9174835.1;transl_table=11 DALFDA020000050.1 tpg gene 21528 22022 . + . ID=gene-O5C65_004845;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=O5C65_004845 DALFDA020000050.1 Protein Homology CDS 21528 22022 . + 0 ID=cds-HJH9174836.1;Parent=gene-O5C65_004845;Dbxref=NCBI_GP:HJH9174836.1;Name=HJH9174836.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=O5C65_004845;product=leucine-responsive transcriptional regulator Lrp;protein_id=HJH9174836.1;transl_table=11 DALFDA020000050.1 tpg gene 22157 24573 . + . ID=gene-O5C65_004846;Name=ftsK;end_range=24573,.;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=O5C65_004846;partial=true DALFDA020000050.1 Protein Homology CDS 22157 24573 . + 0 ID=cds-HJH9174837.1;Parent=gene-O5C65_004846;Dbxref=NCBI_GP:HJH9174837.1;Name=HJH9174837.1;Ontology_term=GO:0003677,GO:0005524;end_range=24573,.;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=O5C65_004846;partial=true;product=DNA translocase FtsK;protein_id=HJH9174837.1;transl_table=11 ##sequence-region DALFDA020000051.1 1 23981 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000051.1 tpg region 1 23981 . + . ID=DALFDA020000051.1:1..23981;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000051.1 tpg gene 143 772 . + . ID=gene-O5C65_004847;Name=O5C65_004847;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004847 DALFDA020000051.1 GeneMarkS-2+ CDS 143 772 . + 0 ID=cds-HJH9174838.1;Parent=gene-O5C65_004847;Dbxref=NCBI_GP:HJH9174838.1;Name=HJH9174838.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004847;product=hypothetical protein;protein_id=HJH9174838.1;transl_table=11 DALFDA020000051.1 tpg gene 938 1138 . + . ID=gene-O5C65_004848;Name=O5C65_004848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004848 DALFDA020000051.1 Protein Homology CDS 938 1138 . + 0 ID=cds-HJH9174839.1;Parent=gene-O5C65_004848;Dbxref=NCBI_GP:HJH9174839.1;Name=HJH9174839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727203.1;locus_tag=O5C65_004848;product=hypothetical protein;protein_id=HJH9174839.1;transl_table=11 DALFDA020000051.1 tpg gene 1202 1663 . + . ID=gene-O5C65_004849;Name=O5C65_004849;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004849 DALFDA020000051.1 Protein Homology CDS 1202 1663 . + 0 ID=cds-HJH9174840.1;Parent=gene-O5C65_004849;Dbxref=NCBI_GP:HJH9174840.1;Name=HJH9174840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014728212.1;locus_tag=O5C65_004849;product=YbcN family protein;protein_id=HJH9174840.1;transl_table=11 DALFDA020000051.1 tpg gene 1663 2268 . + . ID=gene-O5C65_004850;Name=O5C65_004850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004850 DALFDA020000051.1 Protein Homology CDS 1663 2268 . + 0 ID=cds-HJH9174841.1;Parent=gene-O5C65_004850;Dbxref=NCBI_GP:HJH9174841.1;Name=HJH9174841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001568780.1;locus_tag=O5C65_004850;product=recombination protein NinG;protein_id=HJH9174841.1;transl_table=11 DALFDA020000051.1 tpg gene 2265 2855 . + . ID=gene-O5C65_004851;Name=O5C65_004851;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004851 DALFDA020000051.1 Protein Homology CDS 2265 2855 . + 0 ID=cds-HJH9174842.1;Parent=gene-O5C65_004851;Dbxref=NCBI_GP:HJH9174842.1;Name=HJH9174842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727199.1;locus_tag=O5C65_004851;product=hypothetical protein;protein_id=HJH9174842.1;transl_table=11 DALFDA020000051.1 tpg gene 2970 3428 . + . ID=gene-O5C65_004852;Name=O5C65_004852;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004852 DALFDA020000051.1 Protein Homology CDS 2970 3428 . + 0 ID=cds-HJH9174843.1;Parent=gene-O5C65_004852;Dbxref=NCBI_GP:HJH9174843.1;Name=HJH9174843.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019056.6;locus_tag=O5C65_004852;product=hypothetical protein;protein_id=HJH9174843.1;transl_table=11 DALFDA020000051.1 tpg gene 3499 3837 . + . ID=gene-O5C65_004853;Name=O5C65_004853;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004853 DALFDA020000051.1 GeneMarkS-2+ CDS 3499 3837 . + 0 ID=cds-HJH9174844.1;Parent=gene-O5C65_004853;Dbxref=NCBI_GP:HJH9174844.1;Name=HJH9174844.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004853;product=hypothetical protein;protein_id=HJH9174844.1;transl_table=11 DALFDA020000051.1 tpg gene 3830 4573 . + . ID=gene-O5C65_004854;Name=O5C65_004854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004854 DALFDA020000051.1 GeneMarkS-2+ CDS 3830 4573 . + 0 ID=cds-HJH9174845.1;Parent=gene-O5C65_004854;Dbxref=NCBI_GP:HJH9174845.1;Name=HJH9174845.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004854;product=hypothetical protein;protein_id=HJH9174845.1;transl_table=11 DALFDA020000051.1 tpg gene 4573 5223 . + . ID=gene-O5C65_004855;Name=O5C65_004855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004855 DALFDA020000051.1 GeneMarkS-2+ CDS 4573 5223 . + 0 ID=cds-HJH9174846.1;Parent=gene-O5C65_004855;Dbxref=NCBI_GP:HJH9174846.1;Name=HJH9174846.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004855;product=hypothetical protein;protein_id=HJH9174846.1;transl_table=11 DALFDA020000051.1 tpg gene 5336 5545 . + . ID=gene-O5C65_004856;Name=O5C65_004856;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004856 DALFDA020000051.1 Protein Homology CDS 5336 5545 . + 0 ID=cds-HJH9174847.1;Parent=gene-O5C65_004856;Dbxref=NCBI_GP:HJH9174847.1;Name=HJH9174847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000561970.1;locus_tag=O5C65_004856;product=hypothetical protein;protein_id=HJH9174847.1;transl_table=11 DALFDA020000051.1 tpg gene 6039 6347 . + . ID=gene-O5C65_004857;Name=O5C65_004857;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004857 DALFDA020000051.1 GeneMarkS-2+ CDS 6039 6347 . + 0 ID=cds-HJH9174848.1;Parent=gene-O5C65_004857;Dbxref=NCBI_GP:HJH9174848.1;Name=HJH9174848.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004857;product=phage holin family protein;protein_id=HJH9174848.1;transl_table=11 DALFDA020000051.1 tpg gene 6356 6505 . + . ID=gene-O5C65_004858;Name=O5C65_004858;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004858 DALFDA020000051.1 GeneMarkS-2+ CDS 6356 6505 . + 0 ID=cds-HJH9174849.1;Parent=gene-O5C65_004858;Dbxref=NCBI_GP:HJH9174849.1;Name=HJH9174849.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004858;product=hypothetical protein;protein_id=HJH9174849.1;transl_table=11 DALFDA020000051.1 tpg gene 6566 6991 . + . ID=gene-O5C65_004859;Name=O5C65_004859;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004859 DALFDA020000051.1 Protein Homology CDS 6566 6991 . + 0 ID=cds-HJH9174850.1;Parent=gene-O5C65_004859;Dbxref=NCBI_GP:HJH9174850.1;Name=HJH9174850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727236.1;locus_tag=O5C65_004859;product=lysozyme;protein_id=HJH9174850.1;transl_table=11 DALFDA020000051.1 tpg gene 7323 7823 . + . ID=gene-O5C65_004860;Name=O5C65_004860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004860 DALFDA020000051.1 Protein Homology CDS 7323 7823 . + 0 ID=cds-HJH9174851.1;Parent=gene-O5C65_004860;Dbxref=NCBI_GP:HJH9174851.1;Name=HJH9174851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001472853.1;locus_tag=O5C65_004860;product=KilA-N domain-containing protein;protein_id=HJH9174851.1;transl_table=11 DALFDA020000051.1 tpg gene 7853 8044 . + . ID=gene-O5C65_004861;Name=O5C65_004861;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004861 DALFDA020000051.1 Protein Homology CDS 7853 8044 . + 0 ID=cds-HJH9174852.1;Parent=gene-O5C65_004861;Dbxref=NCBI_GP:HJH9174852.1;Name=HJH9174852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727234.1;locus_tag=O5C65_004861;product=hypothetical protein;protein_id=HJH9174852.1;transl_table=11 DALFDA020000051.1 tpg gene 8165 8362 . + . ID=gene-O5C65_004862;Name=O5C65_004862;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004862 DALFDA020000051.1 Protein Homology CDS 8165 8362 . + 0 ID=cds-HJH9174853.1;Parent=gene-O5C65_004862;Dbxref=NCBI_GP:HJH9174853.1;Name=HJH9174853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014526537.1;locus_tag=O5C65_004862;product=hypothetical protein;protein_id=HJH9174853.1;transl_table=11 DALFDA020000051.1 tpg gene 8640 9146 . + . ID=gene-O5C65_004863;Name=O5C65_004863;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004863 DALFDA020000051.1 Protein Homology CDS 8640 9146 . + 0 ID=cds-HJH9174854.1;Parent=gene-O5C65_004863;Dbxref=NCBI_GP:HJH9174854.1;Name=HJH9174854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727233.1;locus_tag=O5C65_004863;product=DUF1441 family protein;protein_id=HJH9174854.1;transl_table=11 DALFDA020000051.1 tpg gene 9146 11224 . + . ID=gene-O5C65_004864;Name=O5C65_004864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004864 DALFDA020000051.1 Protein Homology CDS 9146 11224 . + 0 ID=cds-HJH9174855.1;Parent=gene-O5C65_004864;Dbxref=NCBI_GP:HJH9174855.1;Name=HJH9174855.1;Ontology_term=GO:0004519,GO:0005524,GO:0016887;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459887.1;locus_tag=O5C65_004864;product=phage terminase large subunit family protein;protein_id=HJH9174855.1;transl_table=11 DALFDA020000051.1 tpg gene 11234 11446 . + . ID=gene-O5C65_004865;Name=O5C65_004865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004865 DALFDA020000051.1 Protein Homology CDS 11234 11446 . + 0 ID=cds-HJH9174856.1;Parent=gene-O5C65_004865;Dbxref=NCBI_GP:HJH9174856.1;Name=HJH9174856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727230.1;locus_tag=O5C65_004865;product=hypothetical protein;protein_id=HJH9174856.1;transl_table=11 DALFDA020000051.1 tpg gene 11449 12987 . + . ID=gene-O5C65_004866;Name=O5C65_004866;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004866 DALFDA020000051.1 Protein Homology CDS 11449 12987 . + 0 ID=cds-HJH9174857.1;Parent=gene-O5C65_004866;Dbxref=NCBI_GP:HJH9174857.1;Name=HJH9174857.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000511055.1;locus_tag=O5C65_004866;product=phage portal protein;protein_id=HJH9174857.1;transl_table=11 DALFDA020000051.1 tpg gene 12938 14971 . + . ID=gene-O5C65_004867;Name=O5C65_004867;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004867 DALFDA020000051.1 Protein Homology CDS 12938 14971 . + 0 ID=cds-HJH9174858.1;Parent=gene-O5C65_004867;Dbxref=NCBI_GP:HJH9174858.1;Name=HJH9174858.1;Ontology_term=GO:0019082,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=viral protein processing|0019082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727228.1;locus_tag=O5C65_004867;product=ClpP-like prohead protease/major capsid protein fusion protein;protein_id=HJH9174858.1;transl_table=11 DALFDA020000051.1 tpg gene 14985 15311 . + . ID=gene-O5C65_004868;Name=O5C65_004868;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004868 DALFDA020000051.1 Protein Homology CDS 14985 15311 . + 0 ID=cds-HJH9174859.1;Parent=gene-O5C65_004868;Dbxref=NCBI_GP:HJH9174859.1;Name=HJH9174859.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021473.6;locus_tag=O5C65_004868;product=capsid cement protein;protein_id=HJH9174859.1;transl_table=11 DALFDA020000051.1 tpg gene 15311 15661 . + . ID=gene-O5C65_004869;Name=O5C65_004869;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004869 DALFDA020000051.1 Protein Homology CDS 15311 15661 . + 0 ID=cds-HJH9174860.1;Parent=gene-O5C65_004869;Dbxref=NCBI_GP:HJH9174860.1;Name=HJH9174860.1;Ontology_term=GO:0019068;gbkey=CDS;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000093955.1;locus_tag=O5C65_004869;product=head-tail joining protein;protein_id=HJH9174860.1;transl_table=11 DALFDA020000051.1 tpg gene 15693 16367 . + . ID=gene-O5C65_004870;Name=O5C65_004870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004870 DALFDA020000051.1 Protein Homology CDS 15693 16367 . + 0 ID=cds-HJH9174861.1;Parent=gene-O5C65_004870;Dbxref=NCBI_GP:HJH9174861.1;Name=HJH9174861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728996.1;locus_tag=O5C65_004870;product=hypothetical protein;protein_id=HJH9174861.1;transl_table=11 DALFDA020000051.1 tpg gene 16364 16921 . + . ID=gene-O5C65_004871;Name=O5C65_004871;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004871 DALFDA020000051.1 Protein Homology CDS 16364 16921 . + 0 ID=cds-HJH9174862.1;Parent=gene-O5C65_004871;Dbxref=NCBI_GP:HJH9174862.1;Name=HJH9174862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728997.1;locus_tag=O5C65_004871;product=hypothetical protein;protein_id=HJH9174862.1;transl_table=11 DALFDA020000051.1 tpg gene 16893 17804 . + . ID=gene-O5C65_004872;Name=O5C65_004872;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004872 DALFDA020000051.1 Protein Homology CDS 16893 17804 . + 0 ID=cds-HJH9174863.1;Parent=gene-O5C65_004872;Dbxref=NCBI_GP:HJH9174863.1;Name=HJH9174863.1;Ontology_term=GO:0098003,GO:0046872,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_function=metal ion binding|0046872||IEA;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000079173.1;locus_tag=O5C65_004872;product=phage baseplate assembly protein V;protein_id=HJH9174863.1;transl_table=11 DALFDA020000051.1 tpg gene 17811 18155 . + . ID=gene-O5C65_004873;Name=O5C65_004873;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004873 DALFDA020000051.1 Protein Homology CDS 17811 18155 . + 0 ID=cds-HJH9174864.1;Parent=gene-O5C65_004873;Dbxref=NCBI_GP:HJH9174864.1;Name=HJH9174864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001729000.1;locus_tag=O5C65_004873;product=GPW/gp25 family protein;protein_id=HJH9174864.1;transl_table=11 DALFDA020000051.1 tpg gene 18152 19072 . + . ID=gene-O5C65_004874;Name=O5C65_004874;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004874 DALFDA020000051.1 Protein Homology CDS 18152 19072 . + 0 ID=cds-HJH9174865.1;Parent=gene-O5C65_004874;Dbxref=NCBI_GP:HJH9174865.1;Name=HJH9174865.1;Ontology_term=GO:0098045,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_process=virus baseplate assembly|0098045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001729001.1;locus_tag=O5C65_004874;product=baseplate assembly protein;protein_id=HJH9174865.1;transl_table=11 DALFDA020000051.1 tpg gene 19075 19689 . + . ID=gene-O5C65_004875;Name=O5C65_004875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004875 DALFDA020000051.1 Protein Homology CDS 19075 19689 . + 0 ID=cds-HJH9174866.1;Parent=gene-O5C65_004875;Dbxref=NCBI_GP:HJH9174866.1;Name=HJH9174866.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203860.1;locus_tag=O5C65_004875;product=phage tail protein I;protein_id=HJH9174866.1;transl_table=11 DALFDA020000051.1 tpg gene 19693 20766 . + . ID=gene-O5C65_004876;Name=O5C65_004876;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004876 DALFDA020000051.1 Protein Homology CDS 19693 20766 . + 0 ID=cds-HJH9174867.1;Parent=gene-O5C65_004876;Dbxref=NCBI_GP:HJH9174867.1;Name=HJH9174867.1;Ontology_term=GO:0098024;gbkey=CDS;go_component=virus tail%2C fiber|0098024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001729003.1;locus_tag=O5C65_004876;product=phage tail protein;protein_id=HJH9174867.1;transl_table=11 DALFDA020000051.1 tpg gene 20768 21163 . + . ID=gene-O5C65_004877;Name=O5C65_004877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004877 DALFDA020000051.1 Protein Homology CDS 20768 21163 . + 0 ID=cds-HJH9174868.1;Parent=gene-O5C65_004877;Dbxref=NCBI_GP:HJH9174868.1;Name=HJH9174868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000626358.1;locus_tag=O5C65_004877;product=hypothetical protein;protein_id=HJH9174868.1;transl_table=11 DALFDA020000051.1 tpg gene 21160 22668 . + . ID=gene-O5C65_004878;Name=O5C65_004878;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004878 DALFDA020000051.1 Protein Homology CDS 21160 22668 . + 0 ID=cds-HJH9174869.1;Parent=gene-O5C65_004878;Dbxref=NCBI_GP:HJH9174869.1;Name=HJH9174869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000117510.1;locus_tag=O5C65_004878;product=phage tail sheath C-terminal domain-containing protein;protein_id=HJH9174869.1;transl_table=11 DALFDA020000051.1 tpg gene 22686 23198 . + . ID=gene-O5C65_004879;Name=O5C65_004879;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004879 DALFDA020000051.1 Protein Homology CDS 22686 23198 . + 0 ID=cds-HJH9174870.1;Parent=gene-O5C65_004879;Dbxref=NCBI_GP:HJH9174870.1;Name=HJH9174870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001285189.1;locus_tag=O5C65_004879;product=phage major tail tube protein;protein_id=HJH9174870.1;transl_table=11 DALFDA020000051.1 tpg gene 23215 23502 . + . ID=gene-O5C65_004880;Name=O5C65_004880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004880 DALFDA020000051.1 Protein Homology CDS 23215 23502 . + 0 ID=cds-HJH9174871.1;Parent=gene-O5C65_004880;Dbxref=NCBI_GP:HJH9174871.1;Name=HJH9174871.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001729006.1;locus_tag=O5C65_004880;product=phage tail assembly protein;protein_id=HJH9174871.1;transl_table=11 DALFDA020000051.1 tpg gene 23605 23981 . + . ID=gene-O5C65_004881;Name=O5C65_004881;end_range=23981,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004881;partial=true DALFDA020000051.1 Protein Homology CDS 23605 23981 . + 0 ID=cds-HJH9174872.1;Parent=gene-O5C65_004881;Dbxref=NCBI_GP:HJH9174872.1;Name=HJH9174872.1;end_range=23981,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001729007.1;locus_tag=O5C65_004881;partial=true;product=hypothetical protein;protein_id=HJH9174872.1;transl_table=11 ##sequence-region DALFDA020000052.1 1 22171 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000052.1 tpg region 1 22171 . + . ID=DALFDA020000052.1:1..22171;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000052.1 tpg gene 4 80 . - . ID=gene-O5C65_004882;Name=O5C65_004882;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_004882 DALFDA020000052.1 tRNAscan-SE tRNA 4 80 . - . ID=rna-O5C65_004882;Parent=gene-O5C65_004882;anticodon=(pos:complement(44..46));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004882;product=tRNA-Arg DALFDA020000052.1 tRNAscan-SE exon 4 80 . - . ID=exon-O5C65_004882-1;Parent=rna-O5C65_004882;anticodon=(pos:complement(44..46));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004882;product=tRNA-Arg DALFDA020000052.1 tpg gene 89 415 . - . ID=gene-O5C65_004883;Name=O5C65_004883;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004883 DALFDA020000052.1 Protein Homology CDS 89 415 . - 0 ID=cds-HJH9174873.1;Parent=gene-O5C65_004883;Dbxref=NCBI_GP:HJH9174873.1;Name=HJH9174873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460228.1;locus_tag=O5C65_004883;product=four-helix bundle copper-binding protein;protein_id=HJH9174873.1;transl_table=11 DALFDA020000052.1 tpg gene 609 1742 . + . ID=gene-O5C65_004884;Name=O5C65_004884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004884 DALFDA020000052.1 Protein Homology CDS 609 1742 . + 0 ID=cds-HJH9174874.1;Parent=gene-O5C65_004884;Dbxref=NCBI_GP:HJH9174874.1;Name=HJH9174874.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460227.1;locus_tag=O5C65_004884;product=mechanosensitive ion channel family protein;protein_id=HJH9174874.1;transl_table=11 DALFDA020000052.1 tpg gene 1824 2414 . - . ID=gene-O5C65_004885;Name=O5C65_004885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004885 DALFDA020000052.1 Protein Homology CDS 1824 2414 . - 0 ID=cds-HJH9174875.1;Parent=gene-O5C65_004885;Dbxref=NCBI_GP:HJH9174875.1;Name=HJH9174875.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460226.1;locus_tag=O5C65_004885;product=ATP-binding cassette domain-containing protein;protein_id=HJH9174875.1;transl_table=11 DALFDA020000052.1 tpg gene 2408 3205 . - . ID=gene-O5C65_004886;Name=O5C65_004886;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004886 DALFDA020000052.1 Protein Homology CDS 2408 3205 . - 0 ID=cds-HJH9174876.1;Parent=gene-O5C65_004886;Dbxref=NCBI_GP:HJH9174876.1;Name=HJH9174876.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460225.1;locus_tag=O5C65_004886;product=ATP-binding cassette domain-containing protein;protein_id=HJH9174876.1;transl_table=11 DALFDA020000052.1 tpg gene 3199 4011 . - . ID=gene-O5C65_004887;Name=O5C65_004887;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004887 DALFDA020000052.1 Protein Homology CDS 3199 4011 . - 0 ID=cds-HJH9174877.1;Parent=gene-O5C65_004887;Dbxref=NCBI_GP:HJH9174877.1;Name=HJH9174877.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460224.1;locus_tag=O5C65_004887;product=ABC transporter permease;protein_id=HJH9174877.1;transl_table=11 DALFDA020000052.1 tpg gene 4001 4975 . - . ID=gene-O5C65_004888;Name=O5C65_004888;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004888 DALFDA020000052.1 Protein Homology CDS 4001 4975 . - 0 ID=cds-HJH9174878.1;Parent=gene-O5C65_004888;Dbxref=NCBI_GP:HJH9174878.1;Name=HJH9174878.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460223.1;locus_tag=O5C65_004888;product=ABC transporter permease;protein_id=HJH9174878.1;transl_table=11 DALFDA020000052.1 tpg gene 4975 6609 . - . ID=gene-O5C65_004889;Name=O5C65_004889;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004889 DALFDA020000052.1 Protein Homology CDS 4975 6609 . - 0 ID=cds-HJH9174879.1;Parent=gene-O5C65_004889;Dbxref=NCBI_GP:HJH9174879.1;Name=HJH9174879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460222.1;locus_tag=O5C65_004889;product=ABC transporter substrate-binding protein;protein_id=HJH9174879.1;transl_table=11 DALFDA020000052.1 tpg gene 7291 7605 . + . ID=gene-O5C65_004890;Name=O5C65_004890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004890 DALFDA020000052.1 Protein Homology CDS 7291 7605 . + 0 ID=cds-HJH9174880.1;Parent=gene-O5C65_004890;Dbxref=NCBI_GP:HJH9174880.1;Name=HJH9174880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460221.1;locus_tag=O5C65_004890;product=TRL-like family protein;protein_id=HJH9174880.1;transl_table=11 DALFDA020000052.1 tpg gene 7754 8284 . + . ID=gene-O5C65_004891;Name=O5C65_004891;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004891 DALFDA020000052.1 Protein Homology CDS 7754 8284 . + 0 ID=cds-HJH9174881.1;Parent=gene-O5C65_004891;Dbxref=NCBI_GP:HJH9174881.1;Name=HJH9174881.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460220.1;locus_tag=O5C65_004891;product=cytochrome b;protein_id=HJH9174881.1;transl_table=11 DALFDA020000052.1 tpg gene 8367 9410 . - . ID=gene-O5C65_004892;Name=O5C65_004892;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004892 DALFDA020000052.1 Protein Homology CDS 8367 9410 . - 0 ID=cds-HJH9174882.1;Parent=gene-O5C65_004892;Dbxref=NCBI_GP:HJH9174882.1;Name=HJH9174882.1;Ontology_term=GO:0005975,GO:0004308,GO:0016997;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA,alpha-sialidase activity|0016997||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460219.1;locus_tag=O5C65_004892;product=sialidase family protein;protein_id=HJH9174882.1;transl_table=11 DALFDA020000052.1 tpg gene 9749 10216 . - . ID=gene-O5C65_004893;Name=O5C65_004893;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004893 DALFDA020000052.1 Protein Homology CDS 9749 10216 . - 0 ID=cds-HJH9174883.1;Parent=gene-O5C65_004893;Dbxref=NCBI_GP:HJH9174883.1;Name=HJH9174883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460218.1;locus_tag=O5C65_004893;product=Hsp20 family protein;protein_id=HJH9174883.1;transl_table=11 DALFDA020000052.1 tpg pseudogene 10369 10641 . - . ID=gene-O5C65_004894;Name=O5C65_004894;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004894;pseudo=true DALFDA020000052.1 Protein Homology CDS 10369 10641 . - 0 ID=cds-O5C65_004894;Parent=gene-O5C65_004894;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460217.1;locus_tag=O5C65_004894;product=hypothetical protein;pseudo=true;transl_table=11 DALFDA020000052.1 tpg gene 11344 11688 . + . ID=gene-O5C65_004895;Name=O5C65_004895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004895 DALFDA020000052.1 Protein Homology CDS 11344 11688 . + 0 ID=cds-HJH9174884.1;Parent=gene-O5C65_004895;Dbxref=NCBI_GP:HJH9174884.1;Name=HJH9174884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460216.1;locus_tag=O5C65_004895;product=c-type lysozyme inhibitor;protein_id=HJH9174884.1;transl_table=11 DALFDA020000052.1 tpg gene 12443 12519 . - . ID=gene-O5C65_004896;Name=O5C65_004896;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_004896 DALFDA020000052.1 tRNAscan-SE tRNA 12443 12519 . - . ID=rna-O5C65_004896;Parent=gene-O5C65_004896;anticodon=(pos:complement(12483..12485));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004896;product=tRNA-Arg DALFDA020000052.1 tRNAscan-SE exon 12443 12519 . - . ID=exon-O5C65_004896-1;Parent=rna-O5C65_004896;anticodon=(pos:complement(12483..12485));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004896;product=tRNA-Arg DALFDA020000052.1 tpg gene 12925 13482 . - . ID=gene-O5C65_004897;Name=pagC;gbkey=Gene;gene=pagC;gene_biotype=protein_coding;locus_tag=O5C65_004897 DALFDA020000052.1 Protein Homology CDS 12925 13482 . - 0 ID=cds-HJH9174885.1;Parent=gene-O5C65_004897;Dbxref=NCBI_GP:HJH9174885.1;Name=HJH9174885.1;gbkey=CDS;gene=pagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460215.1;locus_tag=O5C65_004897;product=virulence membrane protein PagC;protein_id=HJH9174885.1;transl_table=11 DALFDA020000052.1 tpg gene 14287 14550 . + . ID=gene-O5C65_004898;Name=pagD;gbkey=Gene;gene=pagD;gene_biotype=protein_coding;locus_tag=O5C65_004898 DALFDA020000052.1 Protein Homology CDS 14287 14550 . + 0 ID=cds-HJH9174886.1;Parent=gene-O5C65_004898;Dbxref=NCBI_GP:HJH9174886.1;Name=HJH9174886.1;gbkey=CDS;gene=pagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460214.1;locus_tag=O5C65_004898;product=virulence protein PagD;protein_id=HJH9174886.1;transl_table=11 DALFDA020000052.1 tpg gene 14682 14894 . + . ID=gene-O5C65_004899;Name=cspF;gbkey=Gene;gene=cspF;gene_biotype=protein_coding;locus_tag=O5C65_004899 DALFDA020000052.1 Protein Homology CDS 14682 14894 . + 0 ID=cds-HJH9174887.1;Parent=gene-O5C65_004899;Dbxref=NCBI_GP:HJH9174887.1;Name=HJH9174887.1;gbkey=CDS;gene=cspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460213.1;locus_tag=O5C65_004899;product=cold shock-like protein CspF;protein_id=HJH9174887.1;transl_table=11 DALFDA020000052.1 tpg gene 15311 15832 . + . ID=gene-O5C65_004900;Name=O5C65_004900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004900 DALFDA020000052.1 Protein Homology CDS 15311 15832 . + 0 ID=cds-HJH9174888.1;Parent=gene-O5C65_004900;Dbxref=NCBI_GP:HJH9174888.1;Name=HJH9174888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460212.1;locus_tag=O5C65_004900;product=ricin-type beta-trefoil lectin domain protein;protein_id=HJH9174888.1;transl_table=11 DALFDA020000052.1 tpg gene 16023 16262 . + . ID=gene-O5C65_004901;Name=msgA;gbkey=Gene;gene=msgA;gene_biotype=protein_coding;locus_tag=O5C65_004901 DALFDA020000052.1 Protein Homology CDS 16023 16262 . + 0 ID=cds-HJH9174889.1;Parent=gene-O5C65_004901;Dbxref=NCBI_GP:HJH9174889.1;Name=HJH9174889.1;gbkey=CDS;gene=msgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460211.1;locus_tag=O5C65_004901;product=virulence protein MsgA;protein_id=HJH9174889.1;transl_table=11 DALFDA020000052.1 tpg gene 16752 17540 . + . ID=gene-O5C65_004902;Name=envF;gbkey=Gene;gene=envF;gene_biotype=protein_coding;locus_tag=O5C65_004902 DALFDA020000052.1 Protein Homology CDS 16752 17540 . + 0 ID=cds-HJH9174890.1;Parent=gene-O5C65_004902;Dbxref=NCBI_GP:HJH9174890.1;Name=HJH9174890.1;gbkey=CDS;gene=envF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460210.1;locus_tag=O5C65_004902;product=putative envelope lipoprotein EnvF;protein_id=HJH9174890.1;transl_table=11 DALFDA020000052.1 tpg gene 17862 18068 . + . ID=gene-O5C65_004903;Name=O5C65_004903;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004903 DALFDA020000052.1 Protein Homology CDS 17862 18068 . + 0 ID=cds-HJH9174891.1;Parent=gene-O5C65_004903;Dbxref=NCBI_GP:HJH9174891.1;Name=HJH9174891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000787631.1;locus_tag=O5C65_004903;product=hypothetical protein;protein_id=HJH9174891.1;transl_table=11 DALFDA020000052.1 tpg pseudogene 18344 18409 . - . ID=gene-O5C65_004904;Name=O5C65_004904;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004904;pseudo=true DALFDA020000052.1 Protein Homology CDS 18344 18409 . - 0 ID=cds-O5C65_004904;Parent=gene-O5C65_004904;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264264.1;locus_tag=O5C65_004904;product=phage tail protein;pseudo=true;transl_table=11 DALFDA020000052.1 tpg gene 18535 19659 . - . ID=gene-O5C65_004905;Name=sopF;gbkey=Gene;gene=sopF;gene_biotype=protein_coding;locus_tag=O5C65_004905 DALFDA020000052.1 Protein Homology CDS 18535 19659 . - 0 ID=cds-HJH9174892.1;Parent=gene-O5C65_004905;Dbxref=NCBI_GP:HJH9174892.1;Name=HJH9174892.1;gbkey=CDS;gene=sopF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460209.1;locus_tag=O5C65_004905;product=type III secretion system effector SopF;protein_id=HJH9174892.1;transl_table=11 DALFDA020000052.1 tpg pseudogene 20107 20274 . - . ID=gene-O5C65_004906;Name=O5C65_004906;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004906;pseudo=true DALFDA020000052.1 Protein Homology CDS 20107 20274 . - 0 ID=cds-O5C65_004906;Parent=gene-O5C65_004906;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=O5C65_004906;product=isocitrate/isopropylmalate family dehydrogenase;pseudo=true;transl_table=11 DALFDA020000052.1 tpg gene 20573 21244 . + . ID=gene-O5C65_004907;Name=O5C65_004907;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004907 DALFDA020000052.1 Protein Homology CDS 20573 21244 . + 0 ID=cds-HJH9174893.1;Parent=gene-O5C65_004907;Dbxref=NCBI_GP:HJH9174893.1;Name=HJH9174893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000334630.1;locus_tag=O5C65_004907;product=SOS response-associated peptidase;protein_id=HJH9174893.1;transl_table=11 DALFDA020000052.1 tpg pseudogene 21237 21459 . - . ID=gene-O5C65_004908;Name=O5C65_004908;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004908;pseudo=true DALFDA020000052.1 Protein Homology CDS 21237 21459 . - 0 ID=cds-O5C65_004908;Parent=gene-O5C65_004908;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=O5C65_004908;product=DUF4113 domain-containing protein;pseudo=true;transl_table=11 DALFDA020000052.1 tpg gene 21555 22171 . - . ID=gene-O5C65_004909;Name=O5C65_004909;end_range=22171,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004909;partial=true DALFDA020000052.1 Protein Homology CDS 21555 22171 . - 2 ID=cds-HJH9174894.1;Parent=gene-O5C65_004909;Dbxref=NCBI_GP:HJH9174894.1;Name=HJH9174894.1;Ontology_term=GO:0016567,GO:0004842;end_range=22171,.;gbkey=CDS;go_function=ubiquitin-protein transferase activity|0004842||IEA;go_process=protein ubiquitination|0016567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461184.1;locus_tag=O5C65_004909;partial=true;product=NEL-type E3 ubiquitin ligase domain-containing protein;protein_id=HJH9174894.1;transl_table=11 ##sequence-region DALFDA020000053.1 1 19836 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000053.1 tpg region 1 19836 . + . ID=DALFDA020000053.1:1..19836;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000053.1 tpg gene 57 341 . - . ID=gene-O5C65_004910;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=O5C65_004910 DALFDA020000053.1 Protein Homology CDS 57 341 . - 0 ID=cds-HJH9174895.1;Parent=gene-O5C65_004910;Dbxref=NCBI_GP:HJH9174895.1;Name=HJH9174895.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=O5C65_004910;product=integration host factor subunit beta;protein_id=HJH9174895.1;transl_table=11 DALFDA020000053.1 tpg gene 497 2170 . - . ID=gene-O5C65_004911;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=O5C65_004911 DALFDA020000053.1 Protein Homology CDS 497 2170 . - 0 ID=cds-HJH9174896.1;Parent=gene-O5C65_004911;Dbxref=NCBI_GP:HJH9174896.1;Name=HJH9174896.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=O5C65_004911;product=30S ribosomal protein S1;protein_id=HJH9174896.1;transl_table=11 DALFDA020000053.1 tpg gene 2284 2967 . - . ID=gene-O5C65_004912;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=O5C65_004912 DALFDA020000053.1 Protein Homology CDS 2284 2967 . - 0 ID=cds-HJH9174897.1;Parent=gene-O5C65_004912;Dbxref=NCBI_GP:HJH9174897.1;Name=HJH9174897.1;Ontology_term=GO:0015949,GO:0004127,GO:0005524;gbkey=CDS;gene=cmk;go_function=(d)CMP kinase activity|0004127||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=O5C65_004912;product=(d)CMP kinase;protein_id=HJH9174897.1;transl_table=11 DALFDA020000053.1 tpg gene 3140 3901 . - . ID=gene-O5C65_004913;Name=O5C65_004913;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004913 DALFDA020000053.1 Protein Homology CDS 3140 3901 . - 0 ID=cds-HJH9174898.1;Parent=gene-O5C65_004913;Dbxref=NCBI_GP:HJH9174898.1;Name=HJH9174898.1;Ontology_term=GO:0004222,GO:0008237,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459954.1;locus_tag=O5C65_004913;product=M48 family metallopeptidase;protein_id=HJH9174898.1;transl_table=11 DALFDA020000053.1 tpg gene 4044 5327 . - . ID=gene-O5C65_004914;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=O5C65_004914 DALFDA020000053.1 Protein Homology CDS 4044 5327 . - 0 ID=cds-HJH9174899.1;Parent=gene-O5C65_004914;Dbxref=NCBI_GP:HJH9174899.1;Name=HJH9174899.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459953.1;locus_tag=O5C65_004914;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=HJH9174899.1;transl_table=11 DALFDA020000053.1 tpg gene 5397 6485 . - . ID=gene-O5C65_004915;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=O5C65_004915 DALFDA020000053.1 Protein Homology CDS 5397 6485 . - 0 ID=cds-HJH9174900.1;Parent=gene-O5C65_004915;Dbxref=NCBI_GP:HJH9174900.1;Name=HJH9174900.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459952.1;locus_tag=O5C65_004915;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=HJH9174900.1;transl_table=11 DALFDA020000053.1 tpg gene 6671 7363 . - . ID=gene-O5C65_004916;Name=O5C65_004916;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004916 DALFDA020000053.1 Protein Homology CDS 6671 7363 . - 0 ID=cds-HJH9174901.1;Parent=gene-O5C65_004916;Dbxref=NCBI_GP:HJH9174901.1;Name=HJH9174901.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459951.1;locus_tag=O5C65_004916;product=DUF421 domain-containing protein;protein_id=HJH9174901.1;transl_table=11 DALFDA020000053.1 tpg gene 7500 9260 . + . ID=gene-O5C65_004917;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=O5C65_004917 DALFDA020000053.1 Protein Homology CDS 7500 9260 . + 0 ID=cds-HJH9174902.1;Parent=gene-O5C65_004917;Dbxref=NCBI_GP:HJH9174902.1;Name=HJH9174902.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459950.1;locus_tag=O5C65_004917;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=HJH9174902.1;transl_table=11 DALFDA020000053.1 tpg gene 9665 10522 . + . ID=gene-O5C65_004918;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=O5C65_004918 DALFDA020000053.1 Protein Homology CDS 9665 10522 . + 0 ID=cds-HJH9174903.1;Parent=gene-O5C65_004918;Dbxref=NCBI_GP:HJH9174903.1;Name=HJH9174903.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459949.1;locus_tag=O5C65_004918;product=formate transporter FocA;protein_id=HJH9174903.1;transl_table=11 DALFDA020000053.1 tpg gene 10582 12864 . + . ID=gene-O5C65_004919;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=O5C65_004919 DALFDA020000053.1 Protein Homology CDS 10582 12864 . + 0 ID=cds-HJH9174904.1;Parent=gene-O5C65_004919;Dbxref=NCBI_GP:HJH9174904.1;Name=HJH9174904.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459948.1;locus_tag=O5C65_004919;product=formate C-acetyltransferase;protein_id=HJH9174904.1;transl_table=11 DALFDA020000053.1 tpg gene 12936 13895 . - . ID=gene-O5C65_004920;Name=sopD2;gbkey=Gene;gene=sopD2;gene_biotype=protein_coding;locus_tag=O5C65_004920 DALFDA020000053.1 Protein Homology CDS 12936 13895 . - 0 ID=cds-HJH9174905.1;Parent=gene-O5C65_004920;Dbxref=NCBI_GP:HJH9174905.1;Name=HJH9174905.1;gbkey=CDS;gene=sopD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459947.1;locus_tag=O5C65_004920;product=type III secretion system effector SopD2;protein_id=HJH9174905.1;transl_table=11 DALFDA020000053.1 tpg pseudogene 14083 14363 . + . ID=gene-O5C65_004921;Name=O5C65_004921;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004921;pseudo=true DALFDA020000053.1 Protein Homology CDS 14083 14363 . + 0 ID=cds-O5C65_004921;Parent=gene-O5C65_004921;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459946.1;locus_tag=O5C65_004921;product=cytoplasmic protein;pseudo=true;transl_table=11 DALFDA020000053.1 tpg gene 14482 15279 . + . ID=gene-O5C65_004922;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=O5C65_004922 DALFDA020000053.1 Protein Homology CDS 14482 15279 . + 0 ID=cds-HJH9174906.1;Parent=gene-O5C65_004922;Dbxref=NCBI_GP:HJH9174906.1;Name=HJH9174906.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015696619.1;locus_tag=O5C65_004922;product=pyruvate formate lyase 1-activating protein;protein_id=HJH9174906.1;transl_table=11 DALFDA020000053.1 tpg gene 15571 16992 . - . ID=gene-O5C65_004923;Name=O5C65_004923;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004923 DALFDA020000053.1 Protein Homology CDS 15571 16992 . - 0 ID=cds-HJH9174907.1;Parent=gene-O5C65_004923;Dbxref=NCBI_GP:HJH9174907.1;Name=HJH9174907.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459944.1;locus_tag=O5C65_004923;product=APC family permease;protein_id=HJH9174907.1;transl_table=11 DALFDA020000053.1 tpg gene 17210 18358 . - . ID=gene-O5C65_004924;Name=O5C65_004924;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004924 DALFDA020000053.1 Protein Homology CDS 17210 18358 . - 0 ID=cds-HJH9174908.1;Parent=gene-O5C65_004924;Dbxref=NCBI_GP:HJH9174908.1;Name=HJH9174908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459943.1;locus_tag=O5C65_004924;product=MFS transporter;protein_id=HJH9174908.1;transl_table=11 DALFDA020000053.1 tpg gene 18708 19571 . - . ID=gene-O5C65_004925;Name=O5C65_004925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004925 DALFDA020000053.1 Protein Homology CDS 18708 19571 . - 0 ID=cds-HJH9174909.1;Parent=gene-O5C65_004925;Dbxref=NCBI_GP:HJH9174909.1;Name=HJH9174909.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459942.1;locus_tag=O5C65_004925;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=HJH9174909.1;transl_table=11 DALFDA020000053.1 tpg gene 19573 19836 . - . ID=gene-O5C65_004926;Name=dmsB;end_range=19836,.;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=O5C65_004926;partial=true DALFDA020000053.1 Protein Homology CDS 19573 19836 . - 0 ID=cds-HJH9174910.1;Parent=gene-O5C65_004926;Dbxref=NCBI_GP:HJH9174910.1;Name=HJH9174910.1;end_range=19836,.;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459941.1;locus_tag=O5C65_004926;partial=true;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=HJH9174910.1;transl_table=11 ##sequence-region DALFDA020000054.1 1 14969 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000054.1 tpg region 1 14969 . + . ID=DALFDA020000054.1:1..14969;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000054.1 tpg gene 1070 1822 . + . ID=gene-O5C65_004927;Name=O5C65_004927;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004927 DALFDA020000054.1 Protein Homology CDS 1070 1822 . + 0 ID=cds-HJH9174911.1;Parent=gene-O5C65_004927;Dbxref=NCBI_GP:HJH9174911.1;Name=HJH9174911.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008925993.1;locus_tag=O5C65_004927;product=fimbria/pilus periplasmic chaperone;protein_id=HJH9174911.1;transl_table=11 DALFDA020000054.1 tpg gene 1946 4456 . + . ID=gene-O5C65_004928;Name=O5C65_004928;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004928 DALFDA020000054.1 Protein Homology CDS 1946 4456 . + 0 ID=cds-HJH9174912.1;Parent=gene-O5C65_004928;Dbxref=NCBI_GP:HJH9174912.1;Name=HJH9174912.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750512.1;locus_tag=O5C65_004928;product=fimbria/pilus outer membrane usher protein;protein_id=HJH9174912.1;transl_table=11 DALFDA020000054.1 tpg gene 4663 5148 . + . ID=gene-O5C65_004929;Name=O5C65_004929;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004929 DALFDA020000054.1 GeneMarkS-2+ CDS 4663 5148 . + 0 ID=cds-HJH9174913.1;Parent=gene-O5C65_004929;Dbxref=NCBI_GP:HJH9174913.1;Name=HJH9174913.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004929;product=hypothetical protein;protein_id=HJH9174913.1;transl_table=11 DALFDA020000054.1 tpg gene 5324 6262 . + . ID=gene-O5C65_004930;Name=O5C65_004930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004930 DALFDA020000054.1 Protein Homology CDS 5324 6262 . + 0 ID=cds-HJH9174914.1;Parent=gene-O5C65_004930;Dbxref=NCBI_GP:HJH9174914.1;Name=HJH9174914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812557.1;locus_tag=O5C65_004930;product=hypothetical protein;protein_id=HJH9174914.1;transl_table=11 DALFDA020000054.1 tpg gene 7411 7521 . + . ID=gene-O5C65_004931;Name=O5C65_004931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004931 DALFDA020000054.1 Protein Homology CDS 7411 7521 . + 0 ID=cds-HJH9174915.1;Parent=gene-O5C65_004931;Dbxref=NCBI_GP:HJH9174915.1;Name=HJH9174915.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018403.6;locus_tag=O5C65_004931;product=DUF1187 family protein;protein_id=HJH9174915.1;transl_table=11 DALFDA020000054.1 tpg pseudogene 7830 8117 . + . ID=gene-O5C65_004932;Name=O5C65_004932;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004932;pseudo=true DALFDA020000054.1 Protein Homology CDS 7830 8117 . + 0 ID=cds-O5C65_004932;Parent=gene-O5C65_004932;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: protein motif:HMM:NF018262.6;locus_tag=O5C65_004932;product=antiterminator Q family protein;pseudo=true;transl_table=11 DALFDA020000054.1 tpg gene 8064 8432 . - . ID=gene-O5C65_004933;Name=O5C65_004933;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004933 DALFDA020000054.1 GeneMarkS-2+ CDS 8064 8432 . - 0 ID=cds-HJH9174916.1;Parent=gene-O5C65_004933;Dbxref=NCBI_GP:HJH9174916.1;Name=HJH9174916.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004933;product=hypothetical protein;protein_id=HJH9174916.1;transl_table=11 DALFDA020000054.1 tpg gene 8464 8808 . - . ID=gene-O5C65_004934;Name=O5C65_004934;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004934 DALFDA020000054.1 GeneMarkS-2+ CDS 8464 8808 . - 0 ID=cds-HJH9174917.1;Parent=gene-O5C65_004934;Dbxref=NCBI_GP:HJH9174917.1;Name=HJH9174917.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004934;product=hypothetical protein;protein_id=HJH9174917.1;transl_table=11 DALFDA020000054.1 tpg gene 8822 9220 . - . ID=gene-O5C65_004935;Name=O5C65_004935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004935 DALFDA020000054.1 GeneMarkS-2+ CDS 8822 9220 . - 0 ID=cds-HJH9174918.1;Parent=gene-O5C65_004935;Dbxref=NCBI_GP:HJH9174918.1;Name=HJH9174918.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004935;product=hypothetical protein;protein_id=HJH9174918.1;transl_table=11 DALFDA020000054.1 tpg gene 9578 9654 . + . ID=gene-O5C65_004936;Name=O5C65_004936;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_004936 DALFDA020000054.1 tRNAscan-SE tRNA 9578 9654 . + . ID=rna-O5C65_004936;Parent=gene-O5C65_004936;anticodon=(pos:9612..9614);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004936;product=tRNA-Ile DALFDA020000054.1 tRNAscan-SE exon 9578 9654 . + . ID=exon-O5C65_004936-1;Parent=rna-O5C65_004936;anticodon=(pos:9612..9614);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004936;product=tRNA-Ile DALFDA020000054.1 tpg gene 9894 11162 . + . ID=gene-O5C65_004937;Name=O5C65_004937;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004937 DALFDA020000054.1 Protein Homology CDS 9894 11162 . + 0 ID=cds-HJH9174919.1;Parent=gene-O5C65_004937;Dbxref=NCBI_GP:HJH9174919.1;Name=HJH9174919.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012541215.1;locus_tag=O5C65_004937;product=tyrosine-type recombinase/integrase;protein_id=HJH9174919.1;transl_table=11 DALFDA020000054.1 tpg gene 12611 13087 . - . ID=gene-O5C65_004938;Name=O5C65_004938;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004938 DALFDA020000054.1 Protein Homology CDS 12611 13087 . - 0 ID=cds-HJH9174920.1;Parent=gene-O5C65_004938;Dbxref=NCBI_GP:HJH9174920.1;Name=HJH9174920.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: protein motif:HMM:NF018838.6;locus_tag=O5C65_004938;product=CaiF/GrlA family transcriptional regulator;protein_id=HJH9174920.1;transl_table=11 DALFDA020000054.1 tpg gene 13378 14319 . - . ID=gene-O5C65_004939;Name=O5C65_004939;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004939 DALFDA020000054.1 GeneMarkS-2+ CDS 13378 14319 . - 0 ID=cds-HJH9174921.1;Parent=gene-O5C65_004939;Dbxref=NCBI_GP:HJH9174921.1;Name=HJH9174921.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004939;product=fimbrial protein;protein_id=HJH9174921.1;transl_table=11 DALFDA020000054.1 tpg gene 14352 14969 . - . ID=gene-O5C65_004940;Name=O5C65_004940;end_range=14969,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004940;partial=true DALFDA020000054.1 Protein Homology CDS 14352 14969 . - 0 ID=cds-HJH9174922.1;Parent=gene-O5C65_004940;Dbxref=NCBI_GP:HJH9174922.1;Name=HJH9174922.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;end_range=14969,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: protein motif:HMM:NF012786.6;locus_tag=O5C65_004940;partial=true;product=fimbria/pilus outer membrane usher protein;protein_id=HJH9174922.1;transl_table=11 ##sequence-region DALFDA020000055.1 1 11389 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000055.1 tpg region 1 11389 . + . ID=DALFDA020000055.1:1..11389;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000055.1 tpg gene 1 257 . - . ID=gene-O5C65_004941;Name=O5C65_004941;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004941;partial=true;start_range=.,1 DALFDA020000055.1 Protein Homology CDS 1 257 . - 0 ID=cds-HJH9174923.1;Parent=gene-O5C65_004941;Dbxref=NCBI_GP:HJH9174923.1;Name=HJH9174923.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=O5C65_004941;partial=true;product=GTP-binding protein;protein_id=HJH9174923.1;start_range=.,1;transl_table=11 DALFDA020000055.1 tpg gene 373 448 . - . ID=gene-O5C65_004942;Name=O5C65_004942;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_004942 DALFDA020000055.1 tRNAscan-SE tRNA 373 448 . - . ID=rna-O5C65_004942;Parent=gene-O5C65_004942;anticodon=(pos:complement(413..415));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004942;product=tRNA-Thr DALFDA020000055.1 tRNAscan-SE exon 373 448 . - . ID=exon-O5C65_004942-1;Parent=rna-O5C65_004942;anticodon=(pos:complement(413..415));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004942;product=tRNA-Thr DALFDA020000055.1 tpg gene 455 529 . - . ID=gene-O5C65_004943;Name=O5C65_004943;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_004943 DALFDA020000055.1 tRNAscan-SE tRNA 455 529 . - . ID=rna-O5C65_004943;Parent=gene-O5C65_004943;anticodon=(pos:complement(494..496));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004943;product=tRNA-Gly DALFDA020000055.1 tRNAscan-SE exon 455 529 . - . ID=exon-O5C65_004943-1;Parent=rna-O5C65_004943;anticodon=(pos:complement(494..496));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004943;product=tRNA-Gly DALFDA020000055.1 tpg gene 646 730 . - . ID=gene-O5C65_004944;Name=O5C65_004944;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_004944 DALFDA020000055.1 tRNAscan-SE tRNA 646 730 . - . ID=rna-O5C65_004944;Parent=gene-O5C65_004944;anticodon=(pos:complement(694..696));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004944;product=tRNA-Tyr DALFDA020000055.1 tRNAscan-SE exon 646 730 . - . ID=exon-O5C65_004944-1;Parent=rna-O5C65_004944;anticodon=(pos:complement(694..696));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004944;product=tRNA-Tyr DALFDA020000055.1 tpg gene 739 814 . - . ID=gene-O5C65_004945;Name=O5C65_004945;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_004945 DALFDA020000055.1 tRNAscan-SE tRNA 739 814 . - . ID=rna-O5C65_004945;Parent=gene-O5C65_004945;anticodon=(pos:complement(779..781));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004945;product=tRNA-Thr DALFDA020000055.1 tRNAscan-SE exon 739 814 . - . ID=exon-O5C65_004945-1;Parent=rna-O5C65_004945;anticodon=(pos:complement(779..781));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004945;product=tRNA-Thr DALFDA020000055.1 tpg gene 834 1007 . + . ID=gene-O5C65_004946;Name=O5C65_004946;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004946 DALFDA020000055.1 Protein Homology CDS 834 1007 . + 0 ID=cds-HJH9174924.1;Parent=gene-O5C65_004946;Dbxref=NCBI_GP:HJH9174924.1;Name=HJH9174924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463014.1;locus_tag=O5C65_004946;product=hypothetical protein;protein_id=HJH9174924.1;transl_table=11 DALFDA020000055.1 tpg gene 1216 2166 . + . ID=gene-O5C65_004947;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=O5C65_004947 DALFDA020000055.1 Protein Homology CDS 1216 2166 . + 0 ID=cds-HJH9174925.1;Parent=gene-O5C65_004947;Dbxref=NCBI_GP:HJH9174925.1;Name=HJH9174925.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463013.1;locus_tag=O5C65_004947;product=type I pantothenate kinase;protein_id=HJH9174925.1;transl_table=11 DALFDA020000055.1 tpg gene 2201 3163 . - . ID=gene-O5C65_004948;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=O5C65_004948 DALFDA020000055.1 Protein Homology CDS 2201 3163 . - 0 ID=cds-HJH9174926.1;Parent=gene-O5C65_004948;Dbxref=NCBI_GP:HJH9174926.1;Name=HJH9174926.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463012.1;locus_tag=O5C65_004948;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=HJH9174926.1;transl_table=11 DALFDA020000055.1 tpg gene 3160 4188 . - . ID=gene-O5C65_004949;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=O5C65_004949 DALFDA020000055.1 Protein Homology CDS 3160 4188 . - 0 ID=cds-HJH9174927.1;Parent=gene-O5C65_004949;Dbxref=NCBI_GP:HJH9174927.1;Name=HJH9174927.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463011.1;locus_tag=O5C65_004949;product=UDP-N-acetylmuramate dehydrogenase;protein_id=HJH9174927.1;transl_table=11 DALFDA020000055.1 tpg gene 4584 5489 . - . ID=gene-O5C65_004950;Name=O5C65_004950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004950 DALFDA020000055.1 Protein Homology CDS 4584 5489 . - 0 ID=cds-HJH9174928.1;Parent=gene-O5C65_004950;Dbxref=NCBI_GP:HJH9174928.1;Name=HJH9174928.1;Ontology_term=GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: protein motif:HMM:NF012904.6;locus_tag=O5C65_004950;product=dihydrodipicolinate synthase family protein;protein_id=HJH9174928.1;transl_table=11 DALFDA020000055.1 tpg gene 5477 6445 . - . ID=gene-O5C65_004951;Name=O5C65_004951;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004951 DALFDA020000055.1 Protein Homology CDS 5477 6445 . - 0 ID=cds-HJH9174929.1;Parent=gene-O5C65_004951;Dbxref=NCBI_GP:HJH9174929.1;Name=HJH9174929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001166751.1;locus_tag=O5C65_004951;product=2-keto-3-deoxygluconate permease;protein_id=HJH9174929.1;transl_table=11 DALFDA020000055.1 tpg gene 6483 7658 . - . ID=gene-O5C65_004952;Name=O5C65_004952;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004952 DALFDA020000055.1 Protein Homology CDS 6483 7658 . - 0 ID=cds-HJH9174930.1;Parent=gene-O5C65_004952;Dbxref=NCBI_GP:HJH9174930.1;Name=HJH9174930.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: protein motif:HMM:NF045169.3;locus_tag=O5C65_004952;product=UxaA family hydrolase;protein_id=HJH9174930.1;transl_table=11 DALFDA020000055.1 tpg gene 7685 7951 . - . ID=gene-O5C65_004953;Name=O5C65_004953;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004953 DALFDA020000055.1 Protein Homology CDS 7685 7951 . - 0 ID=cds-HJH9174931.1;Parent=gene-O5C65_004953;Dbxref=NCBI_GP:HJH9174931.1;Name=HJH9174931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001663244.1;locus_tag=O5C65_004953;product=UxaA family hydrolase;protein_id=HJH9174931.1;transl_table=11 DALFDA020000055.1 tpg gene 8037 9047 . - . ID=gene-O5C65_004954;Name=dmpG;gbkey=Gene;gene=dmpG;gene_biotype=protein_coding;locus_tag=O5C65_004954 DALFDA020000055.1 Protein Homology CDS 8037 9047 . - 0 ID=cds-HJH9174932.1;Parent=gene-O5C65_004954;Dbxref=NCBI_GP:HJH9174932.1;Name=HJH9174932.1;Ontology_term=GO:0009056,GO:0008701;gbkey=CDS;gene=dmpG;go_function=4-hydroxy-2-oxovalerate aldolase activity|0008701||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932712.1;locus_tag=O5C65_004954;product=4-hydroxy-2-oxovalerate aldolase;protein_id=HJH9174932.1;transl_table=11 DALFDA020000055.1 tpg gene 9050 9922 . - . ID=gene-O5C65_004955;Name=O5C65_004955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004955 DALFDA020000055.1 Protein Homology CDS 9050 9922 . - 0 ID=cds-HJH9174933.1;Parent=gene-O5C65_004955;Dbxref=NCBI_GP:HJH9174933.1;Name=HJH9174933.1;Ontology_term=GO:0009056,GO:0008774;gbkey=CDS;go_function=acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000521142.1;locus_tag=O5C65_004955;product=acetaldehyde dehydrogenase (acetylating);protein_id=HJH9174933.1;transl_table=11 DALFDA020000055.1 tpg gene 10040 10834 . + . ID=gene-O5C65_004956;Name=O5C65_004956;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004956 DALFDA020000055.1 Protein Homology CDS 10040 10834 . + 0 ID=cds-HJH9174934.1;Parent=gene-O5C65_004956;Dbxref=NCBI_GP:HJH9174934.1;Name=HJH9174934.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000246207.1;locus_tag=O5C65_004956;product=IclR family transcriptional regulator;protein_id=HJH9174934.1;transl_table=11 ##sequence-region DALFDA020000056.1 1 10988 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000056.1 tpg region 1 10988 . + . ID=DALFDA020000056.1:1..10988;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000056.1 tpg gene 1 539 . - . ID=gene-O5C65_004957;Name=cueP;gbkey=Gene;gene=cueP;gene_biotype=protein_coding;locus_tag=O5C65_004957;partial=true;start_range=.,1 DALFDA020000056.1 Protein Homology CDS 1 539 . - 0 ID=cds-HJH9174935.1;Parent=gene-O5C65_004957;Dbxref=NCBI_GP:HJH9174935.1;Name=HJH9174935.1;gbkey=CDS;gene=cueP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462551.1;locus_tag=O5C65_004957;partial=true;product=copper-binding periplasmic metallochaperone CueP;protein_id=HJH9174935.1;start_range=.,1;transl_table=11 DALFDA020000056.1 tpg gene 713 925 . - . ID=gene-O5C65_004958;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=O5C65_004958 DALFDA020000056.1 Protein Homology CDS 713 925 . - 0 ID=cds-HJH9174936.1;Parent=gene-O5C65_004958;Dbxref=NCBI_GP:HJH9174936.1;Name=HJH9174936.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=O5C65_004958;product=transcription antiterminator/RNA stability regulator CspE;protein_id=HJH9174936.1;transl_table=11 DALFDA020000056.1 tpg gene 1213 1503 . - . ID=gene-O5C65_004959;Name=O5C65_004959;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004959 DALFDA020000056.1 Protein Homology CDS 1213 1503 . - 0 ID=cds-HJH9174937.1;Parent=gene-O5C65_004959;Dbxref=NCBI_GP:HJH9174937.1;Name=HJH9174937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462549.1;locus_tag=O5C65_004959;product=HTH-type transcriptional regulator;protein_id=HJH9174937.1;transl_table=11 DALFDA020000056.1 tpg gene 1942 2652 . + . ID=gene-O5C65_004960;Name=O5C65_004960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004960 DALFDA020000056.1 Protein Homology CDS 1942 2652 . + 0 ID=cds-HJH9174938.1;Parent=gene-O5C65_004960;Dbxref=NCBI_GP:HJH9174938.1;Name=HJH9174938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462548.1;locus_tag=O5C65_004960;product=DUF3053 domain-containing protein;protein_id=HJH9174938.1;transl_table=11 DALFDA020000056.1 tpg gene 2702 3676 . - . ID=gene-O5C65_004961;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=O5C65_004961 DALFDA020000056.1 Protein Homology CDS 2702 3676 . - 0 ID=cds-HJH9174939.1;Parent=gene-O5C65_004961;Dbxref=NCBI_GP:HJH9174939.1;Name=HJH9174939.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462547.1;locus_tag=O5C65_004961;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=HJH9174939.1;transl_table=11 DALFDA020000056.1 tpg gene 3895 4557 . - . ID=gene-O5C65_004962;Name=O5C65_004962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004962 DALFDA020000056.1 Protein Homology CDS 3895 4557 . - 0 ID=cds-HJH9174940.1;Parent=gene-O5C65_004962;Dbxref=NCBI_GP:HJH9174940.1;Name=HJH9174940.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462546.1;locus_tag=O5C65_004962;product=OmpA family lipoprotein;protein_id=HJH9174940.1;transl_table=11 DALFDA020000056.1 tpg gene 4710 7043 . + . ID=gene-O5C65_004963;Name=O5C65_004963;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004963 DALFDA020000056.1 Protein Homology CDS 4710 7043 . + 0 ID=cds-HJH9174941.1;Parent=gene-O5C65_004963;Dbxref=NCBI_GP:HJH9174941.1;Name=HJH9174941.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462545.1;locus_tag=O5C65_004963;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=HJH9174941.1;transl_table=11 DALFDA020000056.1 tpg gene 7012 7452 . - . ID=gene-O5C65_004964;Name=O5C65_004964;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004964 DALFDA020000056.1 Protein Homology CDS 7012 7452 . - 0 ID=cds-HJH9174942.1;Parent=gene-O5C65_004964;Dbxref=NCBI_GP:HJH9174942.1;Name=HJH9174942.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462544.1;locus_tag=O5C65_004964;product=N-acetyltransferase;protein_id=HJH9174942.1;transl_table=11 DALFDA020000056.1 tpg gene 7430 8011 . - . ID=gene-O5C65_004965;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=O5C65_004965 DALFDA020000056.1 Protein Homology CDS 7430 8011 . - 0 ID=cds-HJH9174943.1;Parent=gene-O5C65_004965;Dbxref=NCBI_GP:HJH9174943.1;Name=HJH9174943.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462543.1;locus_tag=O5C65_004965;product=DNA-3-methyladenine glycosylase I;protein_id=HJH9174943.1;transl_table=11 DALFDA020000056.1 tpg gene 8167 8871 . + . ID=gene-O5C65_004966;Name=O5C65_004966;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004966 DALFDA020000056.1 Protein Homology CDS 8167 8871 . + 0 ID=cds-HJH9174944.1;Parent=gene-O5C65_004966;Dbxref=NCBI_GP:HJH9174944.1;Name=HJH9174944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462542.1;locus_tag=O5C65_004966;product=autotransporter domain-containing protein;protein_id=HJH9174944.1;transl_table=11 DALFDA020000056.1 tpg gene 9102 10793 . + . ID=gene-O5C65_004967;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=O5C65_004967 DALFDA020000056.1 Protein Homology CDS 9102 10793 . + 0 ID=cds-HJH9174945.1;Parent=gene-O5C65_004967;Dbxref=NCBI_GP:HJH9174945.1;Name=HJH9174945.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462536.1;locus_tag=O5C65_004967;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=HJH9174945.1;transl_table=11 DALFDA020000056.1 tpg gene 10884 10960 . + . ID=gene-O5C65_004968;Name=O5C65_004968;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5C65_004968 DALFDA020000056.1 tRNAscan-SE tRNA 10884 10960 . + . ID=rna-O5C65_004968;Parent=gene-O5C65_004968;anticodon=(pos:10918..10920);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004968;product=tRNA-Pro DALFDA020000056.1 tRNAscan-SE exon 10884 10960 . + . ID=exon-O5C65_004968-1;Parent=rna-O5C65_004968;anticodon=(pos:10918..10920);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5C65_004968;product=tRNA-Pro ##sequence-region DALFDA020000057.1 1 10324 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000057.1 tpg region 1 10324 . + . ID=DALFDA020000057.1:1..10324;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000057.1 tpg gene 97 270 . - . ID=gene-O5C65_004969;Name=O5C65_004969;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004969 DALFDA020000057.1 GeneMarkS-2+ CDS 97 270 . - 0 ID=cds-HJH9174946.1;Parent=gene-O5C65_004969;Dbxref=NCBI_GP:HJH9174946.1;Name=HJH9174946.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004969;product=hypothetical protein;protein_id=HJH9174946.1;transl_table=11 DALFDA020000057.1 tpg gene 530 820 . - . ID=gene-O5C65_004970;Name=O5C65_004970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004970 DALFDA020000057.1 GeneMarkS-2+ CDS 530 820 . - 0 ID=cds-HJH9174947.1;Parent=gene-O5C65_004970;Dbxref=NCBI_GP:HJH9174947.1;Name=HJH9174947.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004970;product=hypothetical protein;protein_id=HJH9174947.1;transl_table=11 DALFDA020000057.1 tpg gene 821 1855 . - . ID=gene-O5C65_004971;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=O5C65_004971 DALFDA020000057.1 Protein Homology CDS 821 1855 . - 0 ID=cds-HJH9174948.1;Parent=gene-O5C65_004971;Dbxref=NCBI_GP:HJH9174948.1;Name=HJH9174948.1;gbkey=CDS;gene=xerC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001755634.1;locus_tag=O5C65_004971;product=site-specific tyrosine recombinase XerC;protein_id=HJH9174948.1;transl_table=11 DALFDA020000057.1 tpg gene 2058 5030 . - . ID=gene-O5C65_004972;Name=O5C65_004972;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004972 DALFDA020000057.1 Protein Homology CDS 2058 5030 . - 0 ID=cds-HJH9174949.1;Parent=gene-O5C65_004972;Dbxref=NCBI_GP:HJH9174949.1;Name=HJH9174949.1;Ontology_term=GO:0006260,GO:0003677,GO:0003899,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,zinc ion binding|0008270||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172037.1;locus_tag=O5C65_004972;product=CHC2 zinc finger domain-containing protein;protein_id=HJH9174949.1;transl_table=11 DALFDA020000057.1 tpg gene 5128 5526 . + . ID=gene-O5C65_004973;Name=O5C65_004973;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004973 DALFDA020000057.1 Protein Homology CDS 5128 5526 . + 0 ID=cds-HJH9174950.1;Parent=gene-O5C65_004973;Dbxref=NCBI_GP:HJH9174950.1;Name=HJH9174950.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001401944.1;locus_tag=O5C65_004973;product=helix-turn-helix domain-containing protein;protein_id=HJH9174950.1;transl_table=11 DALFDA020000057.1 tpg gene 5601 5912 . + . ID=gene-O5C65_004974;Name=O5C65_004974;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004974 DALFDA020000057.1 Protein Homology CDS 5601 5912 . + 0 ID=cds-HJH9174951.1;Parent=gene-O5C65_004974;Dbxref=NCBI_GP:HJH9174951.1;Name=HJH9174951.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000807557.1;locus_tag=O5C65_004974;product=SymE family type I addiction module toxin;protein_id=HJH9174951.1;transl_table=11 DALFDA020000057.1 tpg gene 6036 6356 . - . ID=gene-O5C65_004975;Name=O5C65_004975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004975 DALFDA020000057.1 Protein Homology CDS 6036 6356 . - 0 ID=cds-HJH9174952.1;Parent=gene-O5C65_004975;Dbxref=NCBI_GP:HJH9174952.1;Name=HJH9174952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000623017.1;locus_tag=O5C65_004975;product=hypothetical protein;protein_id=HJH9174952.1;transl_table=11 DALFDA020000057.1 tpg pseudogene 6362 8104 . - . ID=gene-O5C65_004976;Name=O5C65_004976;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004976;pseudo=true DALFDA020000057.1 Protein Homology CDS 6362 8104 . - 0 ID=cds-O5C65_004976;Parent=gene-O5C65_004976;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014632.1;locus_tag=O5C65_004976;product=RHS repeat-associated core domain-containing protein;pseudo=true;transl_table=11 DALFDA020000057.1 tpg gene 8130 8384 . - . ID=gene-O5C65_004977;Name=O5C65_004977;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004977 DALFDA020000057.1 Protein Homology CDS 8130 8384 . - 0 ID=cds-HJH9174953.1;Parent=gene-O5C65_004977;Dbxref=NCBI_GP:HJH9174953.1;Name=HJH9174953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534622.1;locus_tag=O5C65_004977;product=nuclear receptor NHR-99;protein_id=HJH9174953.1;transl_table=11 DALFDA020000057.1 tpg pseudogene 8403 9889 . - . ID=gene-O5C65_004978;Name=O5C65_004978;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004978;pseudo=true DALFDA020000057.1 Protein Homology CDS 8403 9889 . - 0 ID=cds-O5C65_004978;Parent=gene-O5C65_004978;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534616.1;locus_tag=O5C65_004978;product=RHS repeat-associated core domain-containing protein;pseudo=true;transl_table=11 ##sequence-region DALFDA020000058.1 1 9989 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000058.1 tpg region 1 9989 . + . ID=DALFDA020000058.1:1..9989;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000058.1 tpg gene 31 1011 . - . ID=gene-O5C65_004979;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=O5C65_004979 DALFDA020000058.1 Protein Homology CDS 31 1011 . - 0 ID=cds-HJH9174954.1;Parent=gene-O5C65_004979;Dbxref=NCBI_GP:HJH9174954.1;Name=HJH9174954.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463359.1;locus_tag=O5C65_004979;product=transaldolase;protein_id=HJH9174954.1;transl_table=11 DALFDA020000058.1 tpg gene 1024 1494 . - . ID=gene-O5C65_004980;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=O5C65_004980 DALFDA020000058.1 Protein Homology CDS 1024 1494 . - 0 ID=cds-HJH9174955.1;Parent=gene-O5C65_004980;Dbxref=NCBI_GP:HJH9174955.1;Name=HJH9174955.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiB;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904736.1;locus_tag=O5C65_004980;product=ribose 5-phosphate isomerase B;protein_id=HJH9174955.1;transl_table=11 DALFDA020000058.1 tpg gene 1811 3568 . + . ID=gene-O5C65_004981;Name=O5C65_004981;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004981 DALFDA020000058.1 Protein Homology CDS 1811 3568 . + 0 ID=cds-HJH9174956.1;Parent=gene-O5C65_004981;Dbxref=NCBI_GP:HJH9174956.1;Name=HJH9174956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904735.1;locus_tag=O5C65_004981;product=dihydroxyacetone kinase family protein;protein_id=HJH9174956.1;transl_table=11 DALFDA020000058.1 tpg gene 3559 4320 . + . ID=gene-O5C65_004982;Name=O5C65_004982;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004982 DALFDA020000058.1 Protein Homology CDS 3559 4320 . + 0 ID=cds-HJH9174957.1;Parent=gene-O5C65_004982;Dbxref=NCBI_GP:HJH9174957.1;Name=HJH9174957.1;Ontology_term=GO:0005975,GO:0006094,GO:0006096,GO:0004807;gbkey=CDS;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=carbohydrate metabolic process|0005975||IEA,gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463350.1;locus_tag=O5C65_004982;product=triose-phosphate isomerase family protein;protein_id=HJH9174957.1;transl_table=11 DALFDA020000058.1 tpg gene 4450 5412 . + . ID=gene-O5C65_004983;Name=O5C65_004983;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004983 DALFDA020000058.1 Protein Homology CDS 4450 5412 . + 0 ID=cds-HJH9174958.1;Parent=gene-O5C65_004983;Dbxref=NCBI_GP:HJH9174958.1;Name=HJH9174958.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015673306.1;locus_tag=O5C65_004983;product=sugar-binding transcriptional regulator;protein_id=HJH9174958.1;transl_table=11 DALFDA020000058.1 tpg gene 5686 6423 . + . ID=gene-O5C65_004984;Name=O5C65_004984;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004984 DALFDA020000058.1 Protein Homology CDS 5686 6423 . + 0 ID=cds-HJH9174959.1;Parent=gene-O5C65_004984;Dbxref=NCBI_GP:HJH9174959.1;Name=HJH9174959.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF013696.6;locus_tag=O5C65_004984;product=M20/M25/M40 family metallo-hydrolase;protein_id=HJH9174959.1;transl_table=11 DALFDA020000058.1 tpg gene 7761 8996 . + . ID=gene-O5C65_004985;Name=O5C65_004985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004985 DALFDA020000058.1 Protein Homology CDS 7761 8996 . + 0 ID=cds-HJH9174960.1;Parent=gene-O5C65_004985;Dbxref=NCBI_GP:HJH9174960.1;Name=HJH9174960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750847.1;locus_tag=O5C65_004985;product=phosphoadenosine phosphosulfate reductase;protein_id=HJH9174960.1;transl_table=11 DALFDA020000058.1 tpg gene 8981 9625 . + . ID=gene-O5C65_004986;Name=O5C65_004986;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004986 DALFDA020000058.1 Protein Homology CDS 8981 9625 . + 0 ID=cds-HJH9174961.1;Parent=gene-O5C65_004986;Dbxref=NCBI_GP:HJH9174961.1;Name=HJH9174961.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837326.1;locus_tag=O5C65_004986;product=IbrB-like domain-containing protein;protein_id=HJH9174961.1;transl_table=11 DALFDA020000058.1 tpg gene 9795 9989 . - . ID=gene-O5C65_004987;Name=O5C65_004987;end_range=9989,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004987;partial=true DALFDA020000058.1 Protein Homology CDS 9795 9989 . - 0 ID=cds-HJH9174962.1;Parent=gene-O5C65_004987;Dbxref=NCBI_GP:HJH9174962.1;Name=HJH9174962.1;end_range=9989,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000605647.1;locus_tag=O5C65_004987;partial=true;product=DUF2534 family protein;protein_id=HJH9174962.1;transl_table=11 ##sequence-region DALFDA020000059.1 1 8164 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000059.1 tpg region 1 8164 . + . ID=DALFDA020000059.1:1..8164;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000059.1 tpg gene 1 1685 . + . ID=gene-O5C65_004988;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=O5C65_004988;partial=true;start_range=.,1 DALFDA020000059.1 Protein Homology CDS 1 1685 . + 2 ID=cds-HJH9174963.1;Parent=gene-O5C65_004988;Dbxref=NCBI_GP:HJH9174963.1;Name=HJH9174963.1;gbkey=CDS;gene=ftsK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=O5C65_004988;partial=true;product=DNA translocase FtsK;protein_id=HJH9174963.1;start_range=.,1;transl_table=11 DALFDA020000059.1 tpg gene 1828 2439 . + . ID=gene-O5C65_004989;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=O5C65_004989 DALFDA020000059.1 Protein Homology CDS 1828 2439 . + 0 ID=cds-HJH9174964.1;Parent=gene-O5C65_004989;Dbxref=NCBI_GP:HJH9174964.1;Name=HJH9174964.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=O5C65_004989;product=outer membrane lipoprotein chaperone LolA;protein_id=HJH9174964.1;transl_table=11 DALFDA020000059.1 tpg gene 2449 3792 . + . ID=gene-O5C65_004990;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=O5C65_004990 DALFDA020000059.1 Protein Homology CDS 2449 3792 . + 0 ID=cds-HJH9174965.1;Parent=gene-O5C65_004990;Dbxref=NCBI_GP:HJH9174965.1;Name=HJH9174965.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459938.1;locus_tag=O5C65_004990;product=replication-associated recombination protein RarA;protein_id=HJH9174965.1;transl_table=11 DALFDA020000059.1 tpg gene 4051 5343 . + . ID=gene-O5C65_004991;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=O5C65_004991 DALFDA020000059.1 Protein Homology CDS 4051 5343 . + 0 ID=cds-HJH9174966.1;Parent=gene-O5C65_004991;Dbxref=NCBI_GP:HJH9174966.1;Name=HJH9174966.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=O5C65_004991;product=serine--tRNA ligase;protein_id=HJH9174966.1;transl_table=11 DALFDA020000059.1 tpg gene 5579 8023 . + . ID=gene-O5C65_004992;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=O5C65_004992 DALFDA020000059.1 Protein Homology CDS 5579 8023 . + 0 ID=cds-HJH9174967.1;Parent=gene-O5C65_004992;Dbxref=NCBI_GP:HJH9174967.1;Name=HJH9174967.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459940.1;locus_tag=O5C65_004992;product=dimethylsulfoxide reductase subunit A;protein_id=HJH9174967.1;transl_table=11 DALFDA020000059.1 tpg gene 8034 8164 . + . ID=gene-O5C65_004993;Name=O5C65_004993;end_range=8164,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004993;partial=true DALFDA020000059.1 Protein Homology CDS 8034 8164 . + 0 ID=cds-HJH9174968.1;Parent=gene-O5C65_004993;Dbxref=NCBI_GP:HJH9174968.1;Name=HJH9174968.1;end_range=8164,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=O5C65_004993;partial=true;product=4Fe-4S binding protein;protein_id=HJH9174968.1;transl_table=11 ##sequence-region DALFDA020000060.1 1 7780 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000060.1 tpg region 1 7780 . + . ID=DALFDA020000060.1:1..7780;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000060.1 tpg gene 1 1511 . - . ID=gene-O5C65_004994;Name=sspH2;gbkey=Gene;gene=sspH2;gene_biotype=protein_coding;locus_tag=O5C65_004994;partial=true;start_range=.,1 DALFDA020000060.1 Protein Homology CDS 1 1511 . - 0 ID=cds-HJH9174969.1;Parent=gene-O5C65_004994;Dbxref=NCBI_GP:HJH9174969.1;Name=HJH9174969.1;gbkey=CDS;gene=sspH2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461184.1;locus_tag=O5C65_004994;partial=true;product=SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2;protein_id=HJH9174969.1;start_range=.,1;transl_table=11 DALFDA020000060.1 tpg pseudogene 1769 1984 . + . ID=gene-O5C65_004995;Name=O5C65_004995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004995;pseudo=true DALFDA020000060.1 Protein Homology CDS 1769 1984 . + 0 ID=cds-O5C65_004995;Parent=gene-O5C65_004995;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461633.1;locus_tag=O5C65_004995;product=tail fiber assembly protein;pseudo=true;transl_table=11 DALFDA020000060.1 tpg pseudogene 2053 2187 . - . ID=gene-O5C65_004996;Name=O5C65_004996;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004996;pseudo=true DALFDA020000060.1 Protein Homology CDS 2053 2187 . - 0 ID=cds-O5C65_004996;Parent=gene-O5C65_004996;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014467.6;locus_tag=O5C65_004996;product=tail fiber assembly protein;pseudo=true;transl_table=11 DALFDA020000060.1 tpg pseudogene 2809 3725 . - . ID=gene-O5C65_004997;Name=O5C65_004997;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_004997;pseudo=true DALFDA020000060.1 Protein Homology CDS 2809 3725 . - 0 ID=cds-O5C65_004997;Parent=gene-O5C65_004997;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001144683.1;locus_tag=O5C65_004997;product=phage tail protein;pseudo=true;transl_table=11 DALFDA020000060.1 tpg gene 3685 3843 . + . ID=gene-O5C65_004998;Name=O5C65_004998;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004998 DALFDA020000060.1 GeneMarkS-2+ CDS 3685 3843 . + 0 ID=cds-HJH9174970.1;Parent=gene-O5C65_004998;Dbxref=NCBI_GP:HJH9174970.1;Name=HJH9174970.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_004998;product=hypothetical protein;protein_id=HJH9174970.1;transl_table=11 DALFDA020000060.1 tpg gene 3873 4061 . + . ID=gene-O5C65_004999;Name=O5C65_004999;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_004999 DALFDA020000060.1 Protein Homology CDS 3873 4061 . + 0 ID=cds-HJH9174971.1;Parent=gene-O5C65_004999;Dbxref=NCBI_GP:HJH9174971.1;Name=HJH9174971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461187.1;locus_tag=O5C65_004999;product=virulence protein MsgA;protein_id=HJH9174971.1;transl_table=11 DALFDA020000060.1 tpg gene 4254 4817 . - . ID=gene-O5C65_005000;Name=pagL;gbkey=Gene;gene=pagL;gene_biotype=protein_coding;locus_tag=O5C65_005000 DALFDA020000060.1 Protein Homology CDS 4254 4817 . - 0 ID=cds-HJH9174972.1;Parent=gene-O5C65_005000;Dbxref=NCBI_GP:HJH9174972.1;Name=HJH9174972.1;gbkey=CDS;gene=pagL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461188.1;locus_tag=O5C65_005000;product=lipid A 3-O-deacylase PagL;protein_id=HJH9174972.1;transl_table=11 DALFDA020000060.1 tpg gene 5636 6283 . + . ID=gene-O5C65_005001;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=O5C65_005001 DALFDA020000060.1 Protein Homology CDS 5636 6283 . + 0 ID=cds-HJH9174973.1;Parent=gene-O5C65_005001;Dbxref=NCBI_GP:HJH9174973.1;Name=HJH9174973.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461189.1;locus_tag=O5C65_005001;product=nitrate/nitrite response regulator protein NarP;protein_id=HJH9174973.1;transl_table=11 DALFDA020000060.1 tpg gene 6327 7370 . - . ID=gene-O5C65_005002;Name=O5C65_005002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005002 DALFDA020000060.1 Protein Homology CDS 6327 7370 . - 0 ID=cds-HJH9174974.1;Parent=gene-O5C65_005002;Dbxref=NCBI_GP:HJH9174974.1;Name=HJH9174974.1;Ontology_term=GO:0017004,GO:0015035,GO:0046872,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=protein-disulfide reductase activity|0015035||IEA,metal ion binding|0046872||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461190.1;locus_tag=O5C65_005002;product=cytochrome c-type biogenesis protein CcmH;protein_id=HJH9174974.1;transl_table=11 DALFDA020000060.1 tpg gene 7367 7780 . - . ID=gene-O5C65_005003;Name=O5C65_005003;end_range=7780,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005003;partial=true DALFDA020000060.1 Protein Homology CDS 7367 7780 . - 0 ID=cds-HJH9174975.1;Parent=gene-O5C65_005003;Dbxref=NCBI_GP:HJH9174975.1;Name=HJH9174975.1;Ontology_term=GO:0017004,GO:0015036,GO:0030288;end_range=7780,.;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=O5C65_005003;partial=true;product=DsbE family thiol:disulfide interchange protein;protein_id=HJH9174975.1;transl_table=11 ##sequence-region DALFDA020000061.1 1 6222 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000061.1 tpg region 1 6222 . + . ID=DALFDA020000061.1:1..6222;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000061.1 tpg gene 1 967 . + . ID=gene-O5C65_005004;Name=O5C65_005004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005004;partial=true;start_range=.,1 DALFDA020000061.1 GeneMarkS-2+ CDS 1 967 . + 1 ID=cds-HJH9174976.1;Parent=gene-O5C65_005004;Dbxref=NCBI_GP:HJH9174976.1;Name=HJH9174976.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_005004;partial=true;product=hypothetical protein;protein_id=HJH9174976.1;start_range=.,1;transl_table=11 DALFDA020000061.1 tpg gene 1158 1622 . - . ID=gene-O5C65_005005;Name=O5C65_005005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005005 DALFDA020000061.1 GeneMarkS-2+ CDS 1158 1622 . - 0 ID=cds-HJH9174977.1;Parent=gene-O5C65_005005;Dbxref=NCBI_GP:HJH9174977.1;Name=HJH9174977.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_005005;product=hypothetical protein;protein_id=HJH9174977.1;transl_table=11 DALFDA020000061.1 tpg gene 1624 1860 . - . ID=gene-O5C65_005006;Name=O5C65_005006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005006 DALFDA020000061.1 GeneMarkS-2+ CDS 1624 1860 . - 0 ID=cds-HJH9174978.1;Parent=gene-O5C65_005006;Dbxref=NCBI_GP:HJH9174978.1;Name=HJH9174978.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_005006;product=hypothetical protein;protein_id=HJH9174978.1;transl_table=11 DALFDA020000061.1 tpg gene 1857 2270 . - . ID=gene-O5C65_005007;Name=O5C65_005007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005007 DALFDA020000061.1 GeneMarkS-2+ CDS 1857 2270 . - 0 ID=cds-HJH9174979.1;Parent=gene-O5C65_005007;Dbxref=NCBI_GP:HJH9174979.1;Name=HJH9174979.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_005007;product=hypothetical protein;protein_id=HJH9174979.1;transl_table=11 DALFDA020000061.1 tpg gene 2263 2613 . - . ID=gene-O5C65_005008;Name=O5C65_005008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005008 DALFDA020000061.1 GeneMarkS-2+ CDS 2263 2613 . - 0 ID=cds-HJH9174980.1;Parent=gene-O5C65_005008;Dbxref=NCBI_GP:HJH9174980.1;Name=HJH9174980.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_005008;product=hypothetical protein;protein_id=HJH9174980.1;transl_table=11 DALFDA020000061.1 tpg gene 2603 2938 . - . ID=gene-O5C65_005009;Name=O5C65_005009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005009 DALFDA020000061.1 GeneMarkS-2+ CDS 2603 2938 . - 0 ID=cds-HJH9174981.1;Parent=gene-O5C65_005009;Dbxref=NCBI_GP:HJH9174981.1;Name=HJH9174981.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_005009;product=hypothetical protein;protein_id=HJH9174981.1;transl_table=11 DALFDA020000061.1 tpg gene 3462 4757 . + . ID=gene-O5C65_005010;Name=mobQ;gbkey=Gene;gene=mobQ;gene_biotype=protein_coding;locus_tag=O5C65_005010 DALFDA020000061.1 Protein Homology CDS 3462 4757 . + 0 ID=cds-HJH9174982.1;Parent=gene-O5C65_005010;Dbxref=NCBI_GP:HJH9174982.1;Name=HJH9174982.1;gbkey=CDS;gene=mobQ;inference=COORDINATES: protein motif:HMM:NF041496.1;locus_tag=O5C65_005010;product=MobQ family relaxase;protein_id=HJH9174982.1;transl_table=11 DALFDA020000061.1 tpg gene 5120 5614 . + . ID=gene-O5C65_005011;Name=O5C65_005011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005011 DALFDA020000061.1 Protein Homology CDS 5120 5614 . + 0 ID=cds-HJH9174983.1;Parent=gene-O5C65_005011;Dbxref=NCBI_GP:HJH9174983.1;Name=HJH9174983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001351134.1;locus_tag=O5C65_005011;product=DUF4755 domain-containing protein;protein_id=HJH9174983.1;transl_table=11 DALFDA020000061.1 tpg gene 5647 6024 . + . ID=gene-O5C65_005012;Name=O5C65_005012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005012 DALFDA020000061.1 Protein Homology CDS 5647 6024 . + 0 ID=cds-HJH9174984.1;Parent=gene-O5C65_005012;Dbxref=NCBI_GP:HJH9174984.1;Name=HJH9174984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015730192.1;locus_tag=O5C65_005012;product=hypothetical protein;protein_id=HJH9174984.1;transl_table=11 ##sequence-region DALFDA020000062.1 1 5892 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000062.1 tpg region 1 5892 . + . ID=DALFDA020000062.1:1..5892;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000062.1 tpg gene 1 89 . + . ID=gene-O5C65_005013;Name=O5C65_005013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005013;partial=true;start_range=.,1 DALFDA020000062.1 Protein Homology CDS 1 89 . + 2 ID=cds-HJH9174985.1;Parent=gene-O5C65_005013;Dbxref=NCBI_GP:HJH9174985.1;Name=HJH9174985.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=O5C65_005013;partial=true;product=IS3 family transposase;protein_id=HJH9174985.1;start_range=.,1;transl_table=11 DALFDA020000062.1 tpg pseudogene 107 361 . - . ID=gene-O5C65_005014;Name=O5C65_005014;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_005014;pseudo=true DALFDA020000062.1 Protein Homology CDS 107 361 . - 0 ID=cds-O5C65_005014;Parent=gene-O5C65_005014;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225313.1;locus_tag=O5C65_005014;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 DALFDA020000062.1 tpg gene 720 2435 . - . ID=gene-O5C65_005015;Name=O5C65_005015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005015 DALFDA020000062.1 Protein Homology CDS 720 2435 . - 0 ID=cds-HJH9174986.1;Parent=gene-O5C65_005015;Dbxref=NCBI_GP:HJH9174986.1;Name=HJH9174986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000583954.1;locus_tag=O5C65_005015;product=DUF2326 domain-containing protein;protein_id=HJH9174986.1;transl_table=11 DALFDA020000062.1 tpg gene 2419 2667 . - . ID=gene-O5C65_005016;Name=O5C65_005016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005016 DALFDA020000062.1 Protein Homology CDS 2419 2667 . - 0 ID=cds-HJH9174987.1;Parent=gene-O5C65_005016;Dbxref=NCBI_GP:HJH9174987.1;Name=HJH9174987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000915843.1;locus_tag=O5C65_005016;product=hypothetical protein;protein_id=HJH9174987.1;transl_table=11 DALFDA020000062.1 tpg gene 2667 3626 . - . ID=gene-O5C65_005017;Name=O5C65_005017;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005017 DALFDA020000062.1 Protein Homology CDS 2667 3626 . - 0 ID=cds-HJH9174988.1;Parent=gene-O5C65_005017;Dbxref=NCBI_GP:HJH9174988.1;Name=HJH9174988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000957732.1;locus_tag=O5C65_005017;product=SMEK domain-containing protein;protein_id=HJH9174988.1;transl_table=11 DALFDA020000062.1 tpg gene 4156 4428 . - . ID=gene-O5C65_005018;Name=O5C65_005018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005018 DALFDA020000062.1 Protein Homology CDS 4156 4428 . - 0 ID=cds-HJH9174989.1;Parent=gene-O5C65_005018;Dbxref=NCBI_GP:HJH9174989.1;Name=HJH9174989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308323.1;locus_tag=O5C65_005018;product=ogr/Delta-like zinc finger family protein;protein_id=HJH9174989.1;transl_table=11 DALFDA020000062.1 tpg gene 4428 5189 . - . ID=gene-O5C65_005019;Name=O5C65_005019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005019 DALFDA020000062.1 Protein Homology CDS 4428 5189 . - 0 ID=cds-HJH9174990.1;Parent=gene-O5C65_005019;Dbxref=NCBI_GP:HJH9174990.1;Name=HJH9174990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001066197.1;locus_tag=O5C65_005019;product=septation initiation protein;protein_id=HJH9174990.1;transl_table=11 DALFDA020000062.1 tpg gene 5590 5892 . - . ID=gene-O5C65_005020;Name=O5C65_005020;end_range=5892,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005020;partial=true DALFDA020000062.1 Protein Homology CDS 5590 5892 . - 0 ID=cds-HJH9174991.1;Parent=gene-O5C65_005020;Dbxref=NCBI_GP:HJH9174991.1;Name=HJH9174991.1;end_range=5892,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211874.1;locus_tag=O5C65_005020;partial=true;product=alkaline-shock protein;protein_id=HJH9174991.1;transl_table=11 ##sequence-region DALFDA020000063.1 1 4551 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000063.1 tpg region 1 4551 . + . ID=DALFDA020000063.1:1..4551;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000063.1 tpg gene 302 874 . + . ID=gene-O5C65_005021;Name=hin;gbkey=Gene;gene=hin;gene_biotype=protein_coding;locus_tag=O5C65_005021 DALFDA020000063.1 Protein Homology CDS 302 874 . + 0 ID=cds-HJH9174992.1;Parent=gene-O5C65_005021;Dbxref=NCBI_GP:HJH9174992.1;Name=HJH9174992.1;gbkey=CDS;gene=hin;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461699.1;locus_tag=O5C65_005021;product=flagellar phase variation DNA invertase Hin;protein_id=HJH9174992.1;transl_table=11 DALFDA020000063.1 tpg gene 1238 2758 . + . ID=gene-O5C65_005022;Name=O5C65_005022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005022 DALFDA020000063.1 Protein Homology CDS 1238 2758 . + 0 ID=cds-HJH9174993.1;Parent=gene-O5C65_005022;Dbxref=NCBI_GP:HJH9174993.1;Name=HJH9174993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461698.1;locus_tag=O5C65_005022;product=FliC/FljB family flagellin;protein_id=HJH9174993.1;transl_table=11 DALFDA020000063.1 tpg gene 2826 3365 . + . ID=gene-O5C65_005023;Name=fljA;gbkey=Gene;gene=fljA;gene_biotype=protein_coding;locus_tag=O5C65_005023 DALFDA020000063.1 Protein Homology CDS 2826 3365 . + 0 ID=cds-HJH9174994.1;Parent=gene-O5C65_005023;Dbxref=NCBI_GP:HJH9174994.1;Name=HJH9174994.1;gbkey=CDS;gene=fljA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461697.1;locus_tag=O5C65_005023;product=phase 1 flagellin gene repressor FljA;protein_id=HJH9174994.1;transl_table=11 DALFDA020000063.1 tpg pseudogene 3393 3614 . + . ID=gene-O5C65_005024;Name=O5C65_005024;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_005024;pseudo=true DALFDA020000063.1 Protein Homology CDS 3393 3614 . + 0 ID=cds-O5C65_005024;Parent=gene-O5C65_005024;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784655.1;locus_tag=O5C65_005024;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 DALFDA020000063.1 tpg gene 4194 4397 . + . ID=gene-O5C65_005025;Name=O5C65_005025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005025 DALFDA020000063.1 Protein Homology CDS 4194 4397 . + 0 ID=cds-HJH9174995.1;Parent=gene-O5C65_005025;Dbxref=NCBI_GP:HJH9174995.1;Name=HJH9174995.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005188750.1;locus_tag=O5C65_005025;product=helix-turn-helix transcriptional regulator;protein_id=HJH9174995.1;transl_table=11 ##sequence-region DALFDA020000064.1 1 4112 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000064.1 tpg region 1 4112 . + . ID=DALFDA020000064.1:1..4112;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000064.1 tpg gene 1 551 . - . ID=gene-O5C65_005026;Name=O5C65_005026;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005026;partial=true;start_range=.,1 DALFDA020000064.1 GeneMarkS-2+ CDS 1 551 . - 0 ID=cds-HJH9174996.1;Parent=gene-O5C65_005026;Dbxref=NCBI_GP:HJH9174996.1;Name=HJH9174996.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_005026;partial=true;product=hypothetical protein;protein_id=HJH9174996.1;start_range=.,1;transl_table=11 DALFDA020000064.1 tpg gene 618 1181 . - . ID=gene-O5C65_005027;Name=O5C65_005027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005027 DALFDA020000064.1 GeneMarkS-2+ CDS 618 1181 . - 0 ID=cds-HJH9174997.1;Parent=gene-O5C65_005027;Dbxref=NCBI_GP:HJH9174997.1;Name=HJH9174997.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_005027;product=fimbrial protein;protein_id=HJH9174997.1;transl_table=11 DALFDA020000064.1 tpg gene 2561 2725 . + . ID=gene-O5C65_005028;Name=O5C65_005028;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005028 DALFDA020000064.1 GeneMarkS-2+ CDS 2561 2725 . + 0 ID=cds-HJH9174998.1;Parent=gene-O5C65_005028;Dbxref=NCBI_GP:HJH9174998.1;Name=HJH9174998.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_005028;product=hypothetical protein;protein_id=HJH9174998.1;transl_table=11 ##sequence-region DALFDA020000065.1 1 3700 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000065.1 tpg region 1 3700 . + . ID=DALFDA020000065.1:1..3700;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000065.1 tpg gene 1 1008 . + . ID=gene-O5C65_005029;Name=O5C65_005029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005029;partial=true;start_range=.,1 DALFDA020000065.1 Protein Homology CDS 1 1008 . + 0 ID=cds-HJH9174999.1;Parent=gene-O5C65_005029;Dbxref=NCBI_GP:HJH9174999.1;Name=HJH9174999.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542647.1;locus_tag=O5C65_005029;partial=true;product=type VI secretion system Vgr family protein;protein_id=HJH9174999.1;start_range=.,1;transl_table=11 DALFDA020000065.1 tpg gene 1039 1470 . + . ID=gene-O5C65_005030;Name=O5C65_005030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005030 DALFDA020000065.1 Protein Homology CDS 1039 1470 . + 0 ID=cds-HJH9175000.1;Parent=gene-O5C65_005030;Dbxref=NCBI_GP:HJH9175000.1;Name=HJH9175000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199685.1;locus_tag=O5C65_005030;product=DcrB-related protein;protein_id=HJH9175000.1;transl_table=11 DALFDA020000065.1 tpg gene 1501 3700 . + . ID=gene-O5C65_005031;Name=O5C65_005031;end_range=3700,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005031;partial=true DALFDA020000065.1 Protein Homology CDS 1501 3700 . + 0 ID=cds-HJH9175001.1;Parent=gene-O5C65_005031;Dbxref=NCBI_GP:HJH9175001.1;Name=HJH9175001.1;end_range=3700,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001402129.1;locus_tag=O5C65_005031;partial=true;product=DUF6531 domain-containing protein;protein_id=HJH9175001.1;transl_table=11 ##sequence-region DALFDA020000066.1 1 3663 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000066.1 tpg region 1 3663 . + . ID=DALFDA020000066.1:1..3663;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000066.1 tpg gene 1 409 . + . ID=gene-O5C65_005032;Name=O5C65_005032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005032;partial=true;start_range=.,1 DALFDA020000066.1 Protein Homology CDS 1 409 . + 1 ID=cds-HJH9175002.1;Parent=gene-O5C65_005032;Dbxref=NCBI_GP:HJH9175002.1;Name=HJH9175002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813187.1;locus_tag=O5C65_005032;partial=true;product=DUF7666 domain-containing protein;protein_id=HJH9175002.1;start_range=.,1;transl_table=11 DALFDA020000066.1 tpg gene 478 678 . + . ID=gene-O5C65_005033;Name=O5C65_005033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005033 DALFDA020000066.1 Protein Homology CDS 478 678 . + 0 ID=cds-HJH9175003.1;Parent=gene-O5C65_005033;Dbxref=NCBI_GP:HJH9175003.1;Name=HJH9175003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000532743.1;locus_tag=O5C65_005033;product=DUF7167 family protein;protein_id=HJH9175003.1;transl_table=11 DALFDA020000066.1 tpg gene 830 1144 . + . ID=gene-O5C65_005034;Name=O5C65_005034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005034 DALFDA020000066.1 Protein Homology CDS 830 1144 . + 0 ID=cds-HJH9175004.1;Parent=gene-O5C65_005034;Dbxref=NCBI_GP:HJH9175004.1;Name=HJH9175004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000776962.1;locus_tag=O5C65_005034;product=superinfection exclusion protein;protein_id=HJH9175004.1;transl_table=11 DALFDA020000066.1 tpg gene 1229 1387 . + . ID=gene-O5C65_005035;Name=O5C65_005035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005035 DALFDA020000066.1 Protein Homology CDS 1229 1387 . + 0 ID=cds-HJH9175005.1;Parent=gene-O5C65_005035;Dbxref=NCBI_GP:HJH9175005.1;Name=HJH9175005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582314.1;locus_tag=O5C65_005035;product=protease FtsH-inhibitory lysogeny factor CIII;protein_id=HJH9175005.1;transl_table=11 DALFDA020000066.1 tpg gene 1368 1556 . + . ID=gene-O5C65_005036;Name=O5C65_005036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005036 DALFDA020000066.1 Protein Homology CDS 1368 1556 . + 0 ID=cds-HJH9175006.1;Parent=gene-O5C65_005036;Dbxref=NCBI_GP:HJH9175006.1;Name=HJH9175006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749553.1;locus_tag=O5C65_005036;product=DUF5444 family protein;protein_id=HJH9175006.1;transl_table=11 DALFDA020000066.1 tpg gene 1546 1689 . + . ID=gene-O5C65_005037;Name=O5C65_005037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005037 DALFDA020000066.1 Protein Homology CDS 1546 1689 . + 0 ID=cds-HJH9175007.1;Parent=gene-O5C65_005037;Dbxref=NCBI_GP:HJH9175007.1;Name=HJH9175007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000902093.1;locus_tag=O5C65_005037;product=hypothetical protein;protein_id=HJH9175007.1;transl_table=11 DALFDA020000066.1 tpg gene 1686 2393 . + . ID=gene-O5C65_005038;Name=O5C65_005038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005038 DALFDA020000066.1 Protein Homology CDS 1686 2393 . + 0 ID=cds-HJH9175008.1;Parent=gene-O5C65_005038;Dbxref=NCBI_GP:HJH9175008.1;Name=HJH9175008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231971.1;locus_tag=O5C65_005038;product=Rad52/Rad22 family DNA repair protein;protein_id=HJH9175008.1;transl_table=11 DALFDA020000066.1 tpg gene 2393 2677 . + . ID=gene-O5C65_005039;Name=O5C65_005039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005039 DALFDA020000066.1 Protein Homology CDS 2393 2677 . + 0 ID=cds-HJH9175009.1;Parent=gene-O5C65_005039;Dbxref=NCBI_GP:HJH9175009.1;Name=HJH9175009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001253481.1;locus_tag=O5C65_005039;product=sigma-70 family RNA polymerase sigma factor;protein_id=HJH9175009.1;transl_table=11 DALFDA020000066.1 tpg gene 2724 3017 . + . ID=gene-O5C65_005040;Name=O5C65_005040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005040 DALFDA020000066.1 Protein Homology CDS 2724 3017 . + 0 ID=cds-HJH9175010.1;Parent=gene-O5C65_005040;Dbxref=NCBI_GP:HJH9175010.1;Name=HJH9175010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001111277.1;locus_tag=O5C65_005040;product=phage anti-RecBCD protein;protein_id=HJH9175010.1;transl_table=11 DALFDA020000066.1 tpg gene 3028 3198 . + . ID=gene-O5C65_005041;Name=O5C65_005041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005041 DALFDA020000066.1 Protein Homology CDS 3028 3198 . + 0 ID=cds-HJH9175011.1;Parent=gene-O5C65_005041;Dbxref=NCBI_GP:HJH9175011.1;Name=HJH9175011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001214771.1;locus_tag=O5C65_005041;product=DUF2737 family protein;protein_id=HJH9175011.1;transl_table=11 DALFDA020000066.1 tpg gene 3195 3663 . + . ID=gene-O5C65_005042;Name=O5C65_005042;end_range=3663,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005042;partial=true DALFDA020000066.1 Protein Homology CDS 3195 3663 . + 0 ID=cds-HJH9175012.1;Parent=gene-O5C65_005042;Dbxref=NCBI_GP:HJH9175012.1;Name=HJH9175012.1;end_range=3663,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000665857.1;locus_tag=O5C65_005042;partial=true;product=hypothetical protein;protein_id=HJH9175012.1;transl_table=11 ##sequence-region DALFDA020000067.1 1 3035 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000067.1 tpg region 1 3035 . + . ID=DALFDA020000067.1:1..3035;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000067.1 tpg gene 1 258 . - . ID=gene-O5C65_005043;Name=O5C65_005043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005043;partial=true;start_range=.,1 DALFDA020000067.1 Protein Homology CDS 1 258 . - 0 ID=cds-HJH9175013.1;Parent=gene-O5C65_005043;Dbxref=NCBI_GP:HJH9175013.1;Name=HJH9175013.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=O5C65_005043;partial=true;product=transposase;protein_id=HJH9175013.1;start_range=.,1;transl_table=11 DALFDA020000067.1 tpg gene 453 902 . - . ID=gene-O5C65_005044;Name=O5C65_005044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005044 DALFDA020000067.1 Protein Homology CDS 453 902 . - 0 ID=cds-HJH9175014.1;Parent=gene-O5C65_005044;Dbxref=NCBI_GP:HJH9175014.1;Name=HJH9175014.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675827.1;locus_tag=O5C65_005044;product=tetratricopeptide repeat protein;protein_id=HJH9175014.1;transl_table=11 DALFDA020000067.1 tpg gene 965 1420 . - . ID=gene-O5C65_005045;Name=O5C65_005045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005045 DALFDA020000067.1 Protein Homology CDS 965 1420 . - 0 ID=cds-HJH9175015.1;Parent=gene-O5C65_005045;Dbxref=NCBI_GP:HJH9175015.1;Name=HJH9175015.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675351.1;locus_tag=O5C65_005045;product=tetratricopeptide repeat protein;protein_id=HJH9175015.1;transl_table=11 DALFDA020000067.1 tpg gene 1488 1916 . - . ID=gene-O5C65_005046;Name=O5C65_005046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005046 DALFDA020000067.1 Protein Homology CDS 1488 1916 . - 0 ID=cds-HJH9175016.1;Parent=gene-O5C65_005046;Dbxref=NCBI_GP:HJH9175016.1;Name=HJH9175016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662368.1;locus_tag=O5C65_005046;product=hypothetical protein;protein_id=HJH9175016.1;transl_table=11 DALFDA020000067.1 tpg gene 2151 2546 . - . ID=gene-O5C65_005047;Name=O5C65_005047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005047 DALFDA020000067.1 GeneMarkS-2+ CDS 2151 2546 . - 0 ID=cds-HJH9175017.1;Parent=gene-O5C65_005047;Dbxref=NCBI_GP:HJH9175017.1;Name=HJH9175017.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_005047;product=hypothetical protein;protein_id=HJH9175017.1;transl_table=11 DALFDA020000067.1 tpg gene 2583 3035 . - . ID=gene-O5C65_005048;Name=O5C65_005048;end_range=3035,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005048;partial=true DALFDA020000067.1 Protein Homology CDS 2583 3035 . - 0 ID=cds-HJH9175018.1;Parent=gene-O5C65_005048;Dbxref=NCBI_GP:HJH9175018.1;Name=HJH9175018.1;end_range=3035,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509054.1;locus_tag=O5C65_005048;partial=true;product=type IV secretion protein Rhs;protein_id=HJH9175018.1;transl_table=11 ##sequence-region DALFDA020000068.1 1 2985 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000068.1 tpg region 1 2985 . + . ID=DALFDA020000068.1:1..2985;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000068.1 tpg gene 1 2985 . + . ID=gene-O5C65_005049;Name=O5C65_005049;end_range=2985,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005049;partial=true;start_range=.,1 DALFDA020000068.1 Protein Homology CDS 1 2985 . + 2 ID=cds-HJH9175019.1;Parent=gene-O5C65_005049;Dbxref=NCBI_GP:HJH9175019.1;Name=HJH9175019.1;end_range=2985,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014621.1;locus_tag=O5C65_005049;partial=true;product=RHS domain-containing protein;protein_id=HJH9175019.1;start_range=.,1;transl_table=11 ##sequence-region DALFDA020000069.1 1 2950 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000069.1 tpg region 1 2950 . + . ID=DALFDA020000069.1:1..2950;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000069.1 tpg gene 1 582 . + . ID=gene-O5C65_005050;Name=O5C65_005050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005050;partial=true;start_range=.,1 DALFDA020000069.1 Protein Homology CDS 1 582 . + 0 ID=cds-HJH9175020.1;Parent=gene-O5C65_005050;Dbxref=NCBI_GP:HJH9175020.1;Name=HJH9175020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001555574.1;locus_tag=O5C65_005050;partial=true;product=HNH/endonuclease VII fold putative polymorphic toxin;protein_id=HJH9175020.1;start_range=.,1;transl_table=11 DALFDA020000069.1 tpg gene 593 970 . + . ID=gene-O5C65_005051;Name=O5C65_005051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005051 DALFDA020000069.1 Protein Homology CDS 593 970 . + 0 ID=cds-HJH9175021.1;Parent=gene-O5C65_005051;Dbxref=NCBI_GP:HJH9175021.1;Name=HJH9175021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000289912.1;locus_tag=O5C65_005051;product=Imm50 family immunity protein;protein_id=HJH9175021.1;transl_table=11 DALFDA020000069.1 tpg gene 1210 1626 . + . ID=gene-O5C65_005052;Name=O5C65_005052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005052 DALFDA020000069.1 Protein Homology CDS 1210 1626 . + 0 ID=cds-HJH9175022.1;Parent=gene-O5C65_005052;Dbxref=NCBI_GP:HJH9175022.1;Name=HJH9175022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459285.1;locus_tag=O5C65_005052;product=DUF2195 family protein;protein_id=HJH9175022.1;transl_table=11 DALFDA020000069.1 tpg gene 1650 2171 . + . ID=gene-O5C65_005053;Name=O5C65_005053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005053 DALFDA020000069.1 Protein Homology CDS 1650 2171 . + 0 ID=cds-HJH9175023.1;Parent=gene-O5C65_005053;Dbxref=NCBI_GP:HJH9175023.1;Name=HJH9175023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459286.1;locus_tag=O5C65_005053;product=DUF2778 domain-containing protein;protein_id=HJH9175023.1;transl_table=11 DALFDA020000069.1 tpg gene 2568 2950 . + . ID=gene-O5C65_005054;Name=O5C65_005054;end_range=2950,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005054;partial=true DALFDA020000069.1 Protein Homology CDS 2568 2950 . + 0 ID=cds-HJH9175024.1;Parent=gene-O5C65_005054;Dbxref=NCBI_GP:HJH9175024.1;Name=HJH9175024.1;end_range=2950,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459287.1;locus_tag=O5C65_005054;partial=true;product=type VI secretion system Vgr family protein;protein_id=HJH9175024.1;transl_table=11 ##sequence-region DALFDA020000070.1 1 2818 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000070.1 tpg region 1 2818 . + . ID=DALFDA020000070.1:1..2818;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000070.1 tpg gene 1 272 . - . ID=gene-O5C65_005055;Name=O5C65_005055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005055;partial=true;start_range=.,1 DALFDA020000070.1 GeneMarkS-2+ CDS 1 272 . - 0 ID=cds-HJH9175025.1;Parent=gene-O5C65_005055;Dbxref=NCBI_GP:HJH9175025.1;Name=HJH9175025.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_005055;partial=true;product=hypothetical protein;protein_id=HJH9175025.1;start_range=.,1;transl_table=11 DALFDA020000070.1 tpg gene 639 1088 . + . ID=gene-O5C65_005056;Name=O5C65_005056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005056 DALFDA020000070.1 Protein Homology CDS 639 1088 . + 0 ID=cds-HJH9175026.1;Parent=gene-O5C65_005056;Dbxref=NCBI_GP:HJH9175026.1;Name=HJH9175026.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662352.1;locus_tag=O5C65_005056;product=SymE family type I addiction module toxin;protein_id=HJH9175026.1;transl_table=11 DALFDA020000070.1 tpg gene 1292 1741 . - . ID=gene-O5C65_005057;Name=O5C65_005057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005057 DALFDA020000070.1 GeneMarkS-2+ CDS 1292 1741 . - 0 ID=cds-HJH9175027.1;Parent=gene-O5C65_005057;Dbxref=NCBI_GP:HJH9175027.1;Name=HJH9175027.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_005057;product=hypothetical protein;protein_id=HJH9175027.1;transl_table=11 DALFDA020000070.1 tpg gene 1741 2818 . - . ID=gene-O5C65_005058;Name=O5C65_005058;end_range=2818,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005058;partial=true DALFDA020000070.1 Protein Homology CDS 1741 2818 . - 1 ID=cds-HJH9175028.1;Parent=gene-O5C65_005058;Dbxref=NCBI_GP:HJH9175028.1;Name=HJH9175028.1;end_range=2818,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542648.1;locus_tag=O5C65_005058;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=HJH9175028.1;transl_table=11 ##sequence-region DALFDA020000071.1 1 1882 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000071.1 tpg region 1 1882 . + . ID=DALFDA020000071.1:1..1882;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000071.1 tpg gene 1 252 . + . ID=gene-O5C65_005059;Name=O5C65_005059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005059;partial=true;start_range=.,1 DALFDA020000071.1 GeneMarkS-2+ CDS 1 252 . + 0 ID=cds-HJH9175029.1;Parent=gene-O5C65_005059;Dbxref=NCBI_GP:HJH9175029.1;Name=HJH9175029.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_005059;partial=true;product=hypothetical protein;protein_id=HJH9175029.1;start_range=.,1;transl_table=11 DALFDA020000071.1 tpg gene 249 797 . + . ID=gene-O5C65_005060;Name=O5C65_005060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005060 DALFDA020000071.1 Protein Homology CDS 249 797 . + 0 ID=cds-HJH9175030.1;Parent=gene-O5C65_005060;Dbxref=NCBI_GP:HJH9175030.1;Name=HJH9175030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004386342.1;locus_tag=O5C65_005060;product=HEAT repeat domain-containing protein;protein_id=HJH9175030.1;transl_table=11 DALFDA020000071.1 tpg gene 843 1412 . - . ID=gene-O5C65_005061;Name=O5C65_005061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005061 DALFDA020000071.1 Protein Homology CDS 843 1412 . - 0 ID=cds-HJH9175031.1;Parent=gene-O5C65_005061;Dbxref=NCBI_GP:HJH9175031.1;Name=HJH9175031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005973865.1;locus_tag=O5C65_005061;product=DUF4291 domain-containing protein;protein_id=HJH9175031.1;transl_table=11 DALFDA020000071.1 tpg pseudogene 1534 1650 . + . ID=gene-O5C65_005062;Name=O5C65_005062;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_005062;pseudo=true DALFDA020000071.1 Protein Homology CDS 1534 1650 . + 0 ID=cds-O5C65_005062;Parent=gene-O5C65_005062;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459283.1;locus_tag=O5C65_005062;product=hypothetical protein;pseudo=true;transl_table=11 DALFDA020000071.1 tpg gene 1669 1882 . - . ID=gene-O5C65_005063;Name=O5C65_005063;end_range=1882,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005063;partial=true DALFDA020000071.1 GeneMarkS-2+ CDS 1669 1882 . - 1 ID=cds-HJH9175032.1;Parent=gene-O5C65_005063;Dbxref=NCBI_GP:HJH9175032.1;Name=HJH9175032.1;end_range=1882,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_005063;partial=true;product=hypothetical protein;protein_id=HJH9175032.1;transl_table=11 ##sequence-region DALFDA020000072.1 1 1641 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000072.1 tpg region 1 1641 . + . ID=DALFDA020000072.1:1..1641;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000072.1 tpg gene 1 528 . + . ID=gene-O5C65_005064;Name=O5C65_005064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005064;partial=true;start_range=.,1 DALFDA020000072.1 Protein Homology CDS 1 528 . + 0 ID=cds-HJH9175033.1;Parent=gene-O5C65_005064;Dbxref=NCBI_GP:HJH9175033.1;Name=HJH9175033.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025581.6;locus_tag=O5C65_005064;partial=true;product=DUF4329 domain-containing protein;protein_id=HJH9175033.1;start_range=.,1;transl_table=11 DALFDA020000072.1 tpg gene 554 850 . + . ID=gene-O5C65_005065;Name=O5C65_005065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005065 DALFDA020000072.1 Protein Homology CDS 554 850 . + 0 ID=cds-HJH9175034.1;Parent=gene-O5C65_005065;Dbxref=NCBI_GP:HJH9175034.1;Name=HJH9175034.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026967.6;locus_tag=O5C65_005065;product=NTF2 fold immunity protein;protein_id=HJH9175034.1;transl_table=11 DALFDA020000072.1 tpg pseudogene 955 1266 . + . ID=gene-O5C65_005066;Name=O5C65_005066;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_005066;pseudo=true DALFDA020000072.1 Protein Homology CDS 955 1266 . + 0 ID=cds-O5C65_005066;Parent=gene-O5C65_005066;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006817,GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517246.1;locus_tag=O5C65_005066;product=PstS family phosphate ABC transporter substrate-binding protein;pseudo=true;transl_table=11 DALFDA020000072.1 tpg gene 1355 1641 . + . ID=gene-O5C65_005067;Name=O5C65_005067;end_range=1641,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005067;partial=true DALFDA020000072.1 Protein Homology CDS 1355 1641 . + 0 ID=cds-HJH9175035.1;Parent=gene-O5C65_005067;Dbxref=NCBI_GP:HJH9175035.1;Name=HJH9175035.1;end_range=1641,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016241112.1;locus_tag=O5C65_005067;partial=true;product=DUF6531 domain-containing protein;protein_id=HJH9175035.1;transl_table=11 ##sequence-region DALFDA020000073.1 1 1595 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000073.1 tpg region 1 1595 . + . ID=DALFDA020000073.1:1..1595;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000073.1 tpg gene 1 573 . + . ID=gene-O5C65_005068;Name=O5C65_005068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005068;partial=true;start_range=.,1 DALFDA020000073.1 Protein Homology CDS 1 573 . + 0 ID=cds-HJH9175036.1;Parent=gene-O5C65_005068;Dbxref=NCBI_GP:HJH9175036.1;Name=HJH9175036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542648.1;locus_tag=O5C65_005068;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=HJH9175036.1;start_range=.,1;transl_table=11 DALFDA020000073.1 tpg gene 588 1211 . + . ID=gene-O5C65_005069;Name=O5C65_005069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005069 DALFDA020000073.1 Protein Homology CDS 588 1211 . + 0 ID=cds-HJH9175037.1;Parent=gene-O5C65_005069;Dbxref=NCBI_GP:HJH9175037.1;Name=HJH9175037.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042775.4;locus_tag=O5C65_005069;product=DUF6707 family protein;protein_id=HJH9175037.1;transl_table=11 DALFDA020000073.1 tpg gene 1322 1582 . - . ID=gene-O5C65_005070;Name=O5C65_005070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005070 DALFDA020000073.1 Protein Homology CDS 1322 1582 . - 0 ID=cds-HJH9175038.1;Parent=gene-O5C65_005070;Dbxref=NCBI_GP:HJH9175038.1;Name=HJH9175038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632802.1;locus_tag=O5C65_005070;product=SymE family type I addiction module toxin;protein_id=HJH9175038.1;transl_table=11 ##sequence-region DALFDA020000074.1 1 1240 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000074.1 tpg region 1 1240 . + . ID=DALFDA020000074.1:1..1240;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000074.1 tpg gene 3 482 . + . ID=gene-O5C65_005071;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=O5C65_005071 DALFDA020000074.1 Protein Homology CDS 3 482 . + 0 ID=cds-HJH9175039.1;Parent=gene-O5C65_005071;Dbxref=NCBI_GP:HJH9175039.1;Name=HJH9175039.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461193.1;locus_tag=O5C65_005071;product=cytochrome c maturation protein CcmE;protein_id=HJH9175039.1;transl_table=11 DALFDA020000074.1 tpg gene 479 1240 . + . ID=gene-O5C65_005072;Name=ccsA;end_range=1240,.;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=O5C65_005072;partial=true DALFDA020000074.1 Protein Homology CDS 479 1240 . + 0 ID=cds-HJH9175040.1;Parent=gene-O5C65_005072;Dbxref=NCBI_GP:HJH9175040.1;Name=HJH9175040.1;Ontology_term=GO:0017004,GO:0020037;end_range=1240,.;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=O5C65_005072;partial=true;product=cytochrome c biogenesis protein CcsA;protein_id=HJH9175040.1;transl_table=11 ##sequence-region DALFDA020000075.1 1 1237 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000075.1 tpg region 1 1237 . + . ID=DALFDA020000075.1:1..1237;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000075.1 tpg gene 37 1237 . + . ID=gene-O5C65_005073;Name=O5C65_005073;end_range=1237,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005073;partial=true DALFDA020000075.1 Protein Homology CDS 37 1237 . + 0 ID=cds-HJH9175041.1;Parent=gene-O5C65_005073;Dbxref=NCBI_GP:HJH9175041.1;Name=HJH9175041.1;Ontology_term=GO:0004803;end_range=1237,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005054087.1;locus_tag=O5C65_005073;partial=true;product=IS256 family transposase;protein_id=HJH9175041.1;transl_table=11 ##sequence-region DALFDA020000076.1 1 1196 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000076.1 tpg region 1 1196 . + . ID=DALFDA020000076.1:1..1196;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000076.1 tpg gene 1 1196 . + . ID=gene-O5C65_005074;Name=O5C65_005074;end_range=1196,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005074;partial=true;start_range=.,1 DALFDA020000076.1 Protein Homology CDS 1 1196 . + 0 ID=cds-HJH9175042.1;Parent=gene-O5C65_005074;Dbxref=NCBI_GP:HJH9175042.1;Name=HJH9175042.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;end_range=1196,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: protein motif:HMM:NF012786.6;locus_tag=O5C65_005074;partial=true;product=fimbria/pilus outer membrane usher protein;protein_id=HJH9175042.1;start_range=.,1;transl_table=11 ##sequence-region DALFDA020000077.1 1 1171 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000077.1 tpg region 1 1171 . + . ID=DALFDA020000077.1:1..1171;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000077.1 tpg gene 1 367 . + . ID=gene-O5C65_005075;Name=O5C65_005075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005075;partial=true;start_range=.,1 DALFDA020000077.1 Protein Homology CDS 1 367 . + 1 ID=cds-HJH9175043.1;Parent=gene-O5C65_005075;Dbxref=NCBI_GP:HJH9175043.1;Name=HJH9175043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001684644.1;locus_tag=O5C65_005075;partial=true;product=DUF5448 family protein;protein_id=HJH9175043.1;start_range=.,1;transl_table=11 DALFDA020000077.1 tpg gene 364 795 . + . ID=gene-O5C65_005076;Name=O5C65_005076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005076 DALFDA020000077.1 Protein Homology CDS 364 795 . + 0 ID=cds-HJH9175044.1;Parent=gene-O5C65_005076;Dbxref=NCBI_GP:HJH9175044.1;Name=HJH9175044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000065093.1;locus_tag=O5C65_005076;product=ead/Ea22-like family protein;protein_id=HJH9175044.1;transl_table=11 DALFDA020000077.1 tpg gene 795 1171 . + . ID=gene-O5C65_005077;Name=O5C65_005077;end_range=1171,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005077;partial=true DALFDA020000077.1 Protein Homology CDS 795 1171 . + 0 ID=cds-HJH9175045.1;Parent=gene-O5C65_005077;Dbxref=NCBI_GP:HJH9175045.1;Name=HJH9175045.1;end_range=1171,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000840609.1;locus_tag=O5C65_005077;partial=true;product=SAM-dependent methyltransferase;protein_id=HJH9175045.1;transl_table=11 ##sequence-region DALFDA020000078.1 1 1121 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000078.1 tpg region 1 1121 . + . ID=DALFDA020000078.1:1..1121;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000078.1 tpg gene 15 1121 . + . ID=gene-O5C65_005078;Name=O5C65_005078;end_range=1121,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005078;partial=true DALFDA020000078.1 Protein Homology CDS 15 276 . + 0 ID=cds-HJH9175046.1;Parent=gene-O5C65_005078;Dbxref=NCBI_GP:HJH9175046.1;Name=HJH9175046.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=O5C65_005078;partial=true;product=IS3 family transposase;protein_id=HJH9175046.1;transl_table=11 DALFDA020000078.1 Protein Homology CDS 276 1121 . + 2 ID=cds-HJH9175046.1;Parent=gene-O5C65_005078;Dbxref=NCBI_GP:HJH9175046.1;Name=HJH9175046.1;Note=programmed frameshift;Ontology_term=GO:0004803;end_range=1121,.;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=O5C65_005078;partial=true;product=IS3 family transposase;protein_id=HJH9175046.1;transl_table=11 ##sequence-region DALFDA020000079.1 1 1048 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000079.1 tpg region 1 1048 . + . ID=DALFDA020000079.1:1..1048;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000079.1 tpg gene 1 376 . + . ID=gene-O5C65_005079;Name=O5C65_005079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005079;partial=true;start_range=.,1 DALFDA020000079.1 Protein Homology CDS 1 376 . + 1 ID=cds-HJH9175047.1;Parent=gene-O5C65_005079;Dbxref=NCBI_GP:HJH9175047.1;Name=HJH9175047.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022224.6;locus_tag=O5C65_005079;partial=true;product=phage protein NinX family protein;protein_id=HJH9175047.1;start_range=.,1;transl_table=11 DALFDA020000079.1 tpg gene 373 1048 . + . ID=gene-O5C65_005080;Name=O5C65_005080;end_range=1048,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005080;partial=true DALFDA020000079.1 GeneMarkS-2+ CDS 373 1048 . + 0 ID=cds-HJH9175048.1;Parent=gene-O5C65_005080;Dbxref=NCBI_GP:HJH9175048.1;Name=HJH9175048.1;end_range=1048,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5C65_005080;partial=true;product=hypothetical protein;protein_id=HJH9175048.1;transl_table=11 ##sequence-region DALFDA020000080.1 1 990 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000080.1 tpg region 1 990 . + . ID=DALFDA020000080.1:1..990;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000080.1 tpg gene 1 990 . + . ID=gene-O5C65_005081;Name=O5C65_005081;end_range=990,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005081;partial=true;start_range=.,1 DALFDA020000080.1 Protein Homology CDS 1 990 . + 1 ID=cds-HJH9175049.1;Parent=gene-O5C65_005081;Dbxref=NCBI_GP:HJH9175049.1;Name=HJH9175049.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0005886;end_range=990,.;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=O5C65_005081;partial=true;product=heme lyase CcmF/NrfE family subunit;protein_id=HJH9175049.1;start_range=.,1;transl_table=11 ##sequence-region DALFDA020000081.1 1 953 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000081.1 tpg region 1 953 . + . ID=DALFDA020000081.1:1..953;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000081.1 tpg gene 1 185 . - . ID=gene-O5C65_005082;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=O5C65_005082;partial=true;start_range=.,1 DALFDA020000081.1 Protein Homology CDS 1 185 . - 0 ID=cds-HJH9175050.1;Parent=gene-O5C65_005082;Dbxref=NCBI_GP:HJH9175050.1;Name=HJH9175050.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461194.1;locus_tag=O5C65_005082;partial=true;product=heme exporter protein CcmD;protein_id=HJH9175050.1;start_range=.,1;transl_table=11 DALFDA020000081.1 tpg gene 182 919 . - . ID=gene-O5C65_005083;Name=O5C65_005083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005083 DALFDA020000081.1 Protein Homology CDS 182 919 . - 0 ID=cds-HJH9175051.1;Parent=gene-O5C65_005083;Dbxref=NCBI_GP:HJH9175051.1;Name=HJH9175051.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=O5C65_005083;product=heme ABC transporter permease;protein_id=HJH9175051.1;transl_table=11 ##sequence-region DALFDA020000082.1 1 863 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000082.1 tpg region 1 863 . + . ID=DALFDA020000082.1:1..863;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000082.1 tpg gene 1 863 . + . ID=gene-O5C65_005084;Name=O5C65_005084;end_range=863,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005084;partial=true;start_range=.,1 DALFDA020000082.1 Protein Homology CDS 1 863 . + 0 ID=cds-HJH9175052.1;Parent=gene-O5C65_005084;Dbxref=NCBI_GP:HJH9175052.1;Name=HJH9175052.1;end_range=863,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211874.1;locus_tag=O5C65_005084;partial=true;product=DUF927 domain-containing protein;protein_id=HJH9175052.1;start_range=.,1;transl_table=11 ##sequence-region DALFDA020000083.1 1 798 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000083.1 tpg region 1 798 . + . ID=DALFDA020000083.1:1..798;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000083.1 tpg gene 1 798 . - . ID=gene-O5C65_005085;Name=O5C65_005085;end_range=798,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005085;partial=true;start_range=.,1 DALFDA020000083.1 Protein Homology CDS 1 798 . - 0 ID=cds-HJH9175053.1;Parent=gene-O5C65_005085;Dbxref=NCBI_GP:HJH9175053.1;Name=HJH9175053.1;Ontology_term=GO:0006313,GO:0004803;end_range=798,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=O5C65_005085;partial=true;product=IS3-like element ISSen1 family transposase;protein_id=HJH9175053.1;start_range=.,1;transl_table=11 ##sequence-region DALFDA020000084.1 1 793 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000084.1 tpg region 1 793 . + . ID=DALFDA020000084.1:1..793;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000084.1 tpg gene 108 755 . + . ID=gene-O5C65_005086;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=O5C65_005086 DALFDA020000084.1 Protein Homology CDS 108 755 . + 0 ID=cds-HJH9175054.1;Parent=gene-O5C65_005086;Dbxref=NCBI_GP:HJH9175054.1;Name=HJH9175054.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460229.3;locus_tag=O5C65_005086;product=metal-binding protein ZinT;protein_id=HJH9175054.1;transl_table=11 ##sequence-region DALFDA020000085.1 1 725 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000085.1 tpg region 1 725 . + . ID=DALFDA020000085.1:1..725;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000085.1 tpg gene 73 725 . + . ID=gene-O5C65_005087;Name=O5C65_005087;end_range=725,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005087;partial=true DALFDA020000085.1 Protein Homology CDS 73 725 . + 0 ID=cds-HJH9175055.1;Parent=gene-O5C65_005087;Dbxref=NCBI_GP:HJH9175055.1;Name=HJH9175055.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;end_range=725,.;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: protein motif:HMM:NF012565.6;locus_tag=O5C65_005087;partial=true;product=fimbrial biogenesis chaperone;protein_id=HJH9175055.1;transl_table=11 ##sequence-region DALFDA020000086.1 1 717 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000086.1 tpg region 1 717 . + . ID=DALFDA020000086.1:1..717;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000086.1 tpg pseudogene 1 717 . + . ID=gene-O5C65_005088;Name=O5C65_005088;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5C65_005088;pseudo=true DALFDA020000086.1 Protein Homology CDS 1 717 . + 1 ID=cds-O5C65_005088;Parent=gene-O5C65_005088;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=O5C65_005088;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region DALFDA020000087.1 1 705 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000087.1 tpg region 1 705 . + . ID=DALFDA020000087.1:1..705;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000087.1 tpg gene 1 705 . + . ID=gene-O5C65_005089;Name=O5C65_005089;end_range=705,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005089;partial=true;start_range=.,1 DALFDA020000087.1 Protein Homology CDS 1 705 . + 1 ID=cds-HJH9175056.1;Parent=gene-O5C65_005089;Dbxref=NCBI_GP:HJH9175056.1;Name=HJH9175056.1;end_range=705,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001402129.1;locus_tag=O5C65_005089;partial=true;product=sugar-binding protein;protein_id=HJH9175056.1;start_range=.,1;transl_table=11 ##sequence-region DALFDA020000088.1 1 614 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000088.1 tpg region 1 614 . + . ID=DALFDA020000088.1:1..614;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000088.1 tpg gene 1 614 . + . ID=gene-O5C65_005090;Name=O5C65_005090;end_range=614,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005090;partial=true;start_range=.,1 DALFDA020000088.1 Protein Homology CDS 1 614 . + 0 ID=cds-HJH9175057.1;Parent=gene-O5C65_005090;Dbxref=NCBI_GP:HJH9175057.1;Name=HJH9175057.1;end_range=614,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211874.1;locus_tag=O5C65_005090;partial=true;product=DUF927 domain-containing protein;protein_id=HJH9175057.1;start_range=.,1;transl_table=11 ##sequence-region DALFDA020000089.1 1 572 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000089.1 tpg region 1 572 . + . ID=DALFDA020000089.1:1..572;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000089.1 tpg gene 1 572 . + . ID=gene-O5C65_005091;Name=ccmB;end_range=572,.;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=O5C65_005091;partial=true;start_range=.,1 DALFDA020000089.1 Protein Homology CDS 1 572 . + 0 ID=cds-HJH9175058.1;Parent=gene-O5C65_005091;Dbxref=NCBI_GP:HJH9175058.1;Name=HJH9175058.1;Ontology_term=GO:0015886,GO:0015232;end_range=572,.;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=O5C65_005091;partial=true;product=heme exporter protein CcmB;protein_id=HJH9175058.1;start_range=.,1;transl_table=11 ##sequence-region DALFDA020000090.1 1 513 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000090.1 tpg region 1 513 . + . ID=DALFDA020000090.1:1..513;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000090.1 tpg gene 1 513 . + . ID=gene-O5C65_005092;Name=O5C65_005092;end_range=513,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005092;partial=true;start_range=.,1 DALFDA020000090.1 Protein Homology CDS 1 513 . + 0 ID=cds-HJH9175059.1;Parent=gene-O5C65_005092;Dbxref=NCBI_GP:HJH9175059.1;Name=HJH9175059.1;end_range=513,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000045488.1;locus_tag=O5C65_005092;partial=true;product=hypothetical protein;protein_id=HJH9175059.1;start_range=.,1;transl_table=11 ##sequence-region DALFDA020000091.1 1 500 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000091.1 tpg region 1 500 . + . ID=DALFDA020000091.1:1..500;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000091.1 tpg gene 1 500 . - . ID=gene-O5C65_005093;Name=O5C65_005093;end_range=500,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005093;partial=true;start_range=.,1 DALFDA020000091.1 Protein Homology CDS 1 500 . - 0 ID=cds-HJH9175060.1;Parent=gene-O5C65_005093;Dbxref=NCBI_GP:HJH9175060.1;Name=HJH9175060.1;end_range=500,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542648.1;locus_tag=O5C65_005093;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=HJH9175060.1;start_range=.,1;transl_table=11 ##sequence-region DALFDA020000092.1 1 487 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000092.1 tpg region 1 487 . + . ID=DALFDA020000092.1:1..487;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000092.1 tpg gene 1 487 . + . ID=gene-O5C65_005094;Name=O5C65_005094;end_range=487,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=O5C65_005094;partial=true;start_range=.,1 DALFDA020000092.1 cmsearch rRNA 1 487 . + . ID=rna-O5C65_005094;Parent=gene-O5C65_005094;Dbxref=RFAM:RF00177;end_range=487,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_005094;partial=true;product=16S ribosomal RNA;start_range=.,1 DALFDA020000092.1 cmsearch exon 1 487 . + . ID=exon-O5C65_005094-1;Parent=rna-O5C65_005094;Dbxref=RFAM:RF00177;end_range=487,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_005094;partial=true;product=16S ribosomal RNA;start_range=.,1 ##sequence-region DALFDA020000093.1 1 479 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000093.1 tpg region 1 479 . + . ID=DALFDA020000093.1:1..479;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000093.1 tpg gene 1 479 . + . ID=gene-O5C65_005095;Name=O5C65_005095;end_range=479,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=O5C65_005095;partial=true;start_range=.,1 DALFDA020000093.1 cmsearch rRNA 1 479 . + . ID=rna-O5C65_005095;Parent=gene-O5C65_005095;Dbxref=RFAM:RF02541;end_range=479,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_005095;partial=true;product=23S ribosomal RNA;start_range=.,1 DALFDA020000093.1 cmsearch exon 1 479 . + . ID=exon-O5C65_005095-1;Parent=rna-O5C65_005095;Dbxref=RFAM:RF02541;end_range=479,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_005095;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region DALFDA020000094.1 1 460 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000094.1 tpg region 1 460 . + . ID=DALFDA020000094.1:1..460;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica ##sequence-region DALFDA020000095.1 1 400 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000095.1 tpg region 1 400 . + . ID=DALFDA020000095.1:1..400;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000095.1 tpg gene 1 400 . + . ID=gene-O5C65_005096;Name=O5C65_005096;end_range=400,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005096;partial=true;start_range=.,1 DALFDA020000095.1 Protein Homology CDS 1 400 . + 2 ID=cds-HJH9175061.1;Parent=gene-O5C65_005096;Dbxref=NCBI_GP:HJH9175061.1;Name=HJH9175061.1;end_range=400,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211874.1;locus_tag=O5C65_005096;partial=true;product=toprim domain-containing protein;protein_id=HJH9175061.1;start_range=.,1;transl_table=11 ##sequence-region DALFDA020000096.1 1 399 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000096.1 tpg region 1 399 . + . ID=DALFDA020000096.1:1..399;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000096.1 tpg gene 162 399 . + . ID=gene-O5C65_005097;Name=O5C65_005097;end_range=399,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005097;partial=true DALFDA020000096.1 Protein Homology CDS 162 399 . + 0 ID=cds-HJH9175062.1;Parent=gene-O5C65_005097;Dbxref=NCBI_GP:HJH9175062.1;Name=HJH9175062.1;end_range=399,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001075579.1;locus_tag=O5C65_005097;partial=true;product=DUF5375 family protein;protein_id=HJH9175062.1;transl_table=11 ##sequence-region DALFDA020000097.1 1 393 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000097.1 tpg region 1 393 . + . ID=DALFDA020000097.1:1..393;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000097.1 tpg gene 1 393 . + . ID=gene-O5C65_005098;Name=O5C65_005098;end_range=393,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005098;partial=true;start_range=.,1 DALFDA020000097.1 Protein Homology CDS 1 393 . + 0 ID=cds-HJH9175063.1;Parent=gene-O5C65_005098;Dbxref=NCBI_GP:HJH9175063.1;Name=HJH9175063.1;Ontology_term=GO:0003899,GO:0004386,GO:0008270;end_range=393,.;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA,helicase activity|0004386||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211874.1;locus_tag=O5C65_005098;partial=true;product=primase-helicase zinc-binding domain-containing protein;protein_id=HJH9175063.1;start_range=.,1;transl_table=11 ##sequence-region DALFDA020000098.1 1 386 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000098.1 tpg region 1 386 . + . ID=DALFDA020000098.1:1..386;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000098.1 tpg gene 1 308 . - . ID=gene-O5C65_005099;Name=O5C65_005099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005099;partial=true;start_range=.,1 DALFDA020000098.1 Protein Homology CDS 1 308 . - 0 ID=cds-HJH9175064.1;Parent=gene-O5C65_005099;Dbxref=NCBI_GP:HJH9175064.1;Name=HJH9175064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240448.1;locus_tag=O5C65_005099;partial=true;product=DUF550 domain-containing protein;protein_id=HJH9175064.1;start_range=.,1;transl_table=11 DALFDA020000098.1 tpg gene 312 386 . - . ID=gene-O5C65_005100;Name=O5C65_005100;end_range=386,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005100;partial=true DALFDA020000098.1 Protein Homology CDS 312 386 . - 0 ID=cds-HJH9175065.1;Parent=gene-O5C65_005100;Dbxref=NCBI_GP:HJH9175065.1;Name=HJH9175065.1;end_range=386,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206648.1;locus_tag=O5C65_005100;partial=true;product=SAM-dependent methyltransferase;protein_id=HJH9175065.1;transl_table=11 ##sequence-region DALFDA020000099.1 1 370 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000099.1 tpg region 1 370 . + . ID=DALFDA020000099.1:1..370;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000099.1 tpg gene 1 370 . + . ID=gene-O5C65_005101;Name=O5C65_005101;end_range=370,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=O5C65_005101;partial=true;start_range=.,1 DALFDA020000099.1 cmsearch rRNA 1 370 . + . ID=rna-O5C65_005101;Parent=gene-O5C65_005101;Dbxref=RFAM:RF00177;end_range=370,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_005101;partial=true;product=16S ribosomal RNA;start_range=.,1 DALFDA020000099.1 cmsearch exon 1 370 . + . ID=exon-O5C65_005101-1;Parent=rna-O5C65_005101;Dbxref=RFAM:RF00177;end_range=370,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_005101;partial=true;product=16S ribosomal RNA;start_range=.,1 ##sequence-region DALFDA020000100.1 1 348 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000100.1 tpg region 1 348 . + . ID=DALFDA020000100.1:1..348;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000100.1 tpg gene 1 348 . + . ID=gene-O5C65_005102;Name=O5C65_005102;end_range=348,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=O5C65_005102;partial=true;start_range=.,1 DALFDA020000100.1 cmsearch rRNA 1 348 . + . ID=rna-O5C65_005102;Parent=gene-O5C65_005102;Dbxref=RFAM:RF02541;end_range=348,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_005102;partial=true;product=23S ribosomal RNA;start_range=.,1 DALFDA020000100.1 cmsearch exon 1 348 . + . ID=exon-O5C65_005102-1;Parent=rna-O5C65_005102;Dbxref=RFAM:RF02541;end_range=348,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_005102;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region DALFDA020000101.1 1 346 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000101.1 tpg region 1 346 . + . ID=DALFDA020000101.1:1..346;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000101.1 tpg gene 1 346 . + . ID=gene-O5C65_005103;Name=O5C65_005103;end_range=346,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005103;partial=true;start_range=.,1 DALFDA020000101.1 Protein Homology CDS 1 346 . + 2 ID=cds-HJH9175066.1;Parent=gene-O5C65_005103;Dbxref=NCBI_GP:HJH9175066.1;Name=HJH9175066.1;end_range=346,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025320.6;locus_tag=O5C65_005103;partial=true;product=FimD/PapC N-terminal domain-containing protein;protein_id=HJH9175066.1;start_range=.,1;transl_table=11 ##sequence-region DALFDA020000102.1 1 321 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000102.1 tpg region 1 321 . + . ID=DALFDA020000102.1:1..321;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000102.1 tpg gene 33 321 . + . ID=gene-O5C65_005104;Name=O5C65_005104;end_range=321,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005104;partial=true DALFDA020000102.1 Protein Homology CDS 33 321 . + 0 ID=cds-HJH9175067.1;Parent=gene-O5C65_005104;Dbxref=NCBI_GP:HJH9175067.1;Name=HJH9175067.1;end_range=321,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=O5C65_005104;partial=true;product=IS3 family transposase;protein_id=HJH9175067.1;transl_table=11 ##sequence-region DALFDA020000103.1 1 320 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000103.1 tpg region 1 320 . + . ID=DALFDA020000103.1:1..320;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000103.1 tpg gene 1 320 . - . ID=gene-O5C65_005105;Name=O5C65_005105;end_range=320,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005105;partial=true;start_range=.,1 DALFDA020000103.1 Protein Homology CDS 1 320 . - 0 ID=cds-HJH9175068.1;Parent=gene-O5C65_005105;Dbxref=NCBI_GP:HJH9175068.1;Name=HJH9175068.1;end_range=320,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211874.1;locus_tag=O5C65_005105;partial=true;product=alkaline-shock protein;protein_id=HJH9175068.1;start_range=.,1;transl_table=11 ##sequence-region DALFDA020000104.1 1 281 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000104.1 tpg region 1 281 . + . ID=DALFDA020000104.1:1..281;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000104.1 tpg gene 1 281 . + . ID=gene-O5C65_005106;Name=O5C65_005106;end_range=281,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=O5C65_005106;partial=true;start_range=.,1 DALFDA020000104.1 cmsearch rRNA 1 281 . + . ID=rna-O5C65_005106;Parent=gene-O5C65_005106;Dbxref=RFAM:RF02541;end_range=281,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_005106;partial=true;product=23S ribosomal RNA;start_range=.,1 DALFDA020000104.1 cmsearch exon 1 281 . + . ID=exon-O5C65_005106-1;Parent=rna-O5C65_005106;Dbxref=RFAM:RF02541;end_range=281,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_005106;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region DALFDA020000105.1 1 278 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000105.1 tpg region 1 278 . + . ID=DALFDA020000105.1:1..278;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000105.1 tpg gene 1 278 . + . ID=gene-O5C65_005107;Name=O5C65_005107;end_range=278,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005107;partial=true;start_range=.,1 DALFDA020000105.1 Protein Homology CDS 1 278 . + 0 ID=cds-HJH9175069.1;Parent=gene-O5C65_005107;Dbxref=NCBI_GP:HJH9175069.1;Name=HJH9175069.1;Ontology_term=GO:0005525;end_range=278,.;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=O5C65_005107;partial=true;product=EF-Tu/IF-2/RF-3 family GTPase;protein_id=HJH9175069.1;start_range=.,1;transl_table=11 ##sequence-region DALFDA020000106.1 1 267 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000106.1 tpg region 1 267 . + . ID=DALFDA020000106.1:1..267;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000106.1 tpg gene 125 267 . + . ID=gene-O5C65_005108;Name=O5C65_005108;end_range=267,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005108;partial=true DALFDA020000106.1 Protein Homology CDS 125 267 . + 0 ID=cds-HJH9175070.1;Parent=gene-O5C65_005108;Dbxref=NCBI_GP:HJH9175070.1;Name=HJH9175070.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=267,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=O5C65_005108;partial=true;product=transposase;protein_id=HJH9175070.1;transl_table=11 ##sequence-region DALFDA020000107.1 1 252 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000107.1 tpg region 1 252 . + . ID=DALFDA020000107.1:1..252;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000107.1 tpg gene 1 252 . - . ID=gene-O5C65_005109;Name=O5C65_005109;end_range=252,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005109;partial=true;start_range=.,1 DALFDA020000107.1 Protein Homology CDS 1 252 . - 0 ID=cds-HJH9175071.1;Parent=gene-O5C65_005109;Dbxref=NCBI_GP:HJH9175071.1;Name=HJH9175071.1;end_range=252,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001402129.1;locus_tag=O5C65_005109;partial=true;product=hypothetical protein;protein_id=HJH9175071.1;start_range=.,1;transl_table=11 ##sequence-region DALFDA020000108.1 1 252 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000108.1 tpg region 1 252 . + . ID=DALFDA020000108.1:1..252;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000108.1 tpg gene 1 252 . + . ID=gene-O5C65_005110;Name=O5C65_005110;end_range=252,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=O5C65_005110;partial=true;start_range=.,1 DALFDA020000108.1 cmsearch rRNA 1 252 . + . ID=rna-O5C65_005110;Parent=gene-O5C65_005110;Dbxref=RFAM:RF02541;end_range=252,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_005110;partial=true;product=23S ribosomal RNA;start_range=.,1 DALFDA020000108.1 cmsearch exon 1 252 . + . ID=exon-O5C65_005110-1;Parent=rna-O5C65_005110;Dbxref=RFAM:RF02541;end_range=252,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5C65_005110;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region DALFDA020000109.1 1 248 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000109.1 tpg region 1 248 . + . ID=DALFDA020000109.1:1..248;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000109.1 tpg gene 1 248 . + . ID=gene-O5C65_005111;Name=O5C65_005111;end_range=248,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005111;partial=true;start_range=.,1 DALFDA020000109.1 Protein Homology CDS 1 248 . + 0 ID=cds-HJH9175072.1;Parent=gene-O5C65_005111;Dbxref=NCBI_GP:HJH9175072.1;Name=HJH9175072.1;Ontology_term=GO:0005524;end_range=248,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462719.1;locus_tag=O5C65_005111;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=HJH9175072.1;start_range=.,1;transl_table=11 ##sequence-region DALFDA020000110.1 1 245 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000110.1 tpg region 1 245 . + . ID=DALFDA020000110.1:1..245;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000110.1 tpg gene 1 210 . + . ID=gene-O5C65_005112;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=O5C65_005112;partial=true;start_range=.,1 DALFDA020000110.1 Protein Homology CDS 1 210 . + 0 ID=cds-HJH9175073.1;Parent=gene-O5C65_005112;Dbxref=NCBI_GP:HJH9175073.1;Name=HJH9175073.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=O5C65_005112;partial=true;product=IS200/IS605-like element IS200F family transposase;protein_id=HJH9175073.1;start_range=.,1;transl_table=11 ##sequence-region DALFDA020000111.1 1 206 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000111.1 tpg region 1 206 . + . ID=DALFDA020000111.1:1..206;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000111.1 tpg gene 1 206 . - . ID=gene-O5C65_005113;Name=O5C65_005113;end_range=206,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005113;partial=true;start_range=.,1 DALFDA020000111.1 Protein Homology CDS 1 206 . - 0 ID=cds-HJH9175074.1;Parent=gene-O5C65_005113;Dbxref=NCBI_GP:HJH9175074.1;Name=HJH9175074.1;end_range=206,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000840609.1;locus_tag=O5C65_005113;partial=true;product=SAM-dependent methyltransferase;protein_id=HJH9175074.1;start_range=.,1;transl_table=11 ##sequence-region DALFDA020000112.1 1 203 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000112.1 tpg region 1 203 . + . ID=DALFDA020000112.1:1..203;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000112.1 tpg gene 1 203 . + . ID=gene-O5C65_005114;Name=O5C65_005114;end_range=203,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005114;partial=true;start_range=.,1 DALFDA020000112.1 Protein Homology CDS 1 203 . + 0 ID=cds-HJH9175075.1;Parent=gene-O5C65_005114;Dbxref=NCBI_GP:HJH9175075.1;Name=HJH9175075.1;Ontology_term=GO:0003924,GO:0005525;end_range=203,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=O5C65_005114;partial=true;product=GTP-binding protein;protein_id=HJH9175075.1;start_range=.,1;transl_table=11 ##sequence-region DALFDA020000113.1 1 2790 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000113.1 tpg region 1 2790 . + . ID=DALFDA020000113.1:1..2790;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000113.1 tpg gene 1 822 . + . ID=gene-O5C65_005115;Name=O5C65_005115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005115;partial=true;start_range=.,1 DALFDA020000113.1 Protein Homology CDS 1 822 . + 0 ID=cds-HJH9175076.1;Parent=gene-O5C65_005115;Dbxref=NCBI_GP:HJH9175076.1;Name=HJH9175076.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=O5C65_005115;partial=true;product=YicC/YloC family endoribonuclease;protein_id=HJH9175076.1;start_range=.,1;transl_table=11 DALFDA020000113.1 tpg gene 872 1774 . - . ID=gene-O5C65_005116;Name=O5C65_005116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005116 DALFDA020000113.1 Protein Homology CDS 872 1774 . - 0 ID=cds-HJH9175077.1;Parent=gene-O5C65_005116;Dbxref=NCBI_GP:HJH9175077.1;Name=HJH9175077.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462636.1;locus_tag=O5C65_005116;product=LysR family transcriptional regulator;protein_id=HJH9175077.1;transl_table=11 DALFDA020000113.1 tpg gene 1848 2732 . + . ID=gene-O5C65_005117;Name=O5C65_005117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5C65_005117 DALFDA020000113.1 Protein Homology CDS 1848 2732 . + 0 ID=cds-HJH9175078.1;Parent=gene-O5C65_005117;Dbxref=NCBI_GP:HJH9175078.1;Name=HJH9175078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001083230.1;locus_tag=O5C65_005117;product=HARLDQ motif MBL-fold protein;protein_id=HJH9175078.1;transl_table=11 ##sequence-region DALFDA020000114.1 1 954 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000114.1 tpg region 1 954 . + . ID=DALFDA020000114.1:1..954;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000114.1 tpg gene 102 890 . + . ID=gene-O5C65_005118;Name=aadA;gbkey=Gene;gene=aadA;gene_biotype=protein_coding;locus_tag=O5C65_005118 DALFDA020000114.1 Protein Homology CDS 102 890 . + 0 ID=cds-HJH9175079.1;Parent=gene-O5C65_005118;Dbxref=NCBI_GP:HJH9175079.1;Name=HJH9175079.1;gbkey=CDS;gene=aadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460230.1;locus_tag=O5C65_005118;product=cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9);protein_id=HJH9175079.1;transl_table=11 ##sequence-region DALFDA020000115.1 1 431 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDA020000115.1 tpg region 1 431 . + . ID=DALFDA020000115.1:1..431;Dbxref=taxon:2564799;collection-date=2019;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.4183 N 2.8901 E;mol_type=genomic DNA;nat-host=Gallus gallus;serovar=Mokola;strain=19CS0282;sub-species=enterica DALFDA020000115.1 tpg gene 1 320 . + . ID=gene-O5C65_005119;Name=aac(6');gbkey=Gene;gene=aac(6');gene_biotype=protein_coding;locus_tag=O5C65_005119;partial=true;start_range=.,1 DALFDA020000115.1 Protein Homology CDS 1 320 . + 2 ID=cds-HJH9175080.1;Parent=gene-O5C65_005119;Dbxref=NCBI_GP:HJH9175080.1;Name=HJH9175080.1;Ontology_term=GO:0047663;gbkey=CDS;gene=aac(6');go_function=aminoglycoside 6'-N-acetyltransferase activity|0047663||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460578.1;locus_tag=O5C65_005119;partial=true;product=aminoglycoside 6'-N-acetyltransferase;protein_id=HJH9175080.1;start_range=.,1;transl_table=11 ###