##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build PDT003063682.1 #!genome-build-accession NCBI_Assembly:GCA_054648955.1 #!annotation-date 01/22/2026 20:00:42 #!annotation-source NCBI ##sequence-region DBLQKK010000001.1 1 148518 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000001.1 tpg region 1 148518 . + . ID=DBLQKK010000001.1:1..148518;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000001.1 tpg gene 137 463 . + . ID=gene-ACYKJH_000001;Name=ACYKJH_000001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000001 DBLQKK010000001.1 Protein Homology CDS 137 463 . + 0 ID=cds-HIH2188175.1;Parent=gene-ACYKJH_000001;Dbxref=NCBI_GP:HIH2188175.1;Name=HIH2188175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014517211.1;locus_tag=ACYKJH_000001;product=amino acid transporter;protein_id=HIH2188175.1;transl_table=11 DBLQKK010000001.1 tpg gene 472 612 . + . ID=gene-ACYKJH_000002;Name=ACYKJH_000002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000002 DBLQKK010000001.1 Protein Homology CDS 472 612 . + 0 ID=cds-HIH2188176.1;Parent=gene-ACYKJH_000002;Dbxref=NCBI_GP:HIH2188176.1;Name=HIH2188176.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013050.6;locus_tag=ACYKJH_000002;product=hypothetical protein;protein_id=HIH2188176.1;transl_table=11 DBLQKK010000001.1 tpg gene 624 824 . + . ID=gene-ACYKJH_000003;Name=ACYKJH_000003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000003 DBLQKK010000001.1 Protein Homology CDS 624 824 . + 0 ID=cds-HIH2188177.1;Parent=gene-ACYKJH_000003;Dbxref=NCBI_GP:HIH2188177.1;Name=HIH2188177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014517209.1;locus_tag=ACYKJH_000003;product=di-/tripeptide transporter domain protein;protein_id=HIH2188177.1;transl_table=11 DBLQKK010000001.1 tpg pseudogene 863 1542 . + . ID=gene-ACYKJH_000004;Name=ACYKJH_000004;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_000004;pseudo=true DBLQKK010000001.1 Protein Homology CDS 863 1542 . + 0 ID=cds-ACYKJH_000004;Parent=gene-ACYKJH_000004;Note=frameshifted;Ontology_term=GO:0015833,GO:0015333,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=peptide:proton symporter activity|0015333||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: protein motif:HMM:NF013050.6;locus_tag=ACYKJH_000004;product=oligopeptide:H+ symporter;pseudo=true;transl_table=11 DBLQKK010000001.1 tpg gene 1741 3294 . + . ID=gene-ACYKJH_000005;Name=ACYKJH_000005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000005 DBLQKK010000001.1 Protein Homology CDS 1741 3294 . + 0 ID=cds-HIH2188178.1;Parent=gene-ACYKJH_000005;Dbxref=NCBI_GP:HIH2188178.1;Name=HIH2188178.1;Ontology_term=GO:0015833,GO:0055085,GO:0022857,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010790832.1;locus_tag=ACYKJH_000005;product=peptide MFS transporter;protein_id=HIH2188178.1;transl_table=11 DBLQKK010000001.1 tpg gene 3310 5100 . + . ID=gene-ACYKJH_000006;Name=ACYKJH_000006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000006 DBLQKK010000001.1 Protein Homology CDS 3310 5100 . + 0 ID=cds-HIH2188179.1;Parent=gene-ACYKJH_000006;Dbxref=NCBI_GP:HIH2188179.1;Name=HIH2188179.1;Ontology_term=GO:0006508,GO:0004177,GO:0046872,GO:0070006,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aminopeptidase activity|0004177||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344082.1;locus_tag=ACYKJH_000006;product=aminopeptidase P family protein;protein_id=HIH2188179.1;transl_table=11 DBLQKK010000001.1 tpg gene 5221 7026 . - . ID=gene-ACYKJH_000007;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=ACYKJH_000007 DBLQKK010000001.1 Protein Homology CDS 5221 7026 . - 0 ID=cds-HIH2188180.1;Parent=gene-ACYKJH_000007;Dbxref=NCBI_GP:HIH2188180.1;Name=HIH2188180.1;Ontology_term=GO:0009252,GO:0003824,GO:0008658,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=catalytic activity|0003824||IEA,penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344081.1;locus_tag=ACYKJH_000007;product=penicillin-binding protein 2;protein_id=HIH2188180.1;transl_table=11 DBLQKK010000001.1 tpg gene 7027 7521 . - . ID=gene-ACYKJH_000008;Name=ACYKJH_000008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000008 DBLQKK010000001.1 Protein Homology CDS 7027 7521 . - 0 ID=cds-HIH2188181.1;Parent=gene-ACYKJH_000008;Dbxref=NCBI_GP:HIH2188181.1;Name=HIH2188181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344080.1;locus_tag=ACYKJH_000008;product=hypothetical protein;protein_id=HIH2188181.1;transl_table=11 DBLQKK010000001.1 tpg gene 7518 8114 . - . ID=gene-ACYKJH_000009;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=ACYKJH_000009 DBLQKK010000001.1 Protein Homology CDS 7518 8114 . - 0 ID=cds-HIH2188182.1;Parent=gene-ACYKJH_000009;Dbxref=NCBI_GP:HIH2188182.1;Name=HIH2188182.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344079.1;locus_tag=ACYKJH_000009;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=HIH2188182.1;transl_table=11 DBLQKK010000001.1 tpg gene 8111 8572 . - . ID=gene-ACYKJH_000010;Name=ACYKJH_000010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000010 DBLQKK010000001.1 Protein Homology CDS 8111 8572 . - 0 ID=cds-HIH2188183.1;Parent=gene-ACYKJH_000010;Dbxref=NCBI_GP:HIH2188183.1;Name=HIH2188183.1;Ontology_term=GO:0015920,GO:0001530,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=lipopolysaccharide binding|0001530||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344078.1;locus_tag=ACYKJH_000010;product=LptA/OstA family protein;protein_id=HIH2188183.1;transl_table=11 DBLQKK010000001.1 tpg gene 8554 9069 . - . ID=gene-ACYKJH_000011;Name=ACYKJH_000011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000011 DBLQKK010000001.1 Protein Homology CDS 8554 9069 . - 0 ID=cds-HIH2188184.1;Parent=gene-ACYKJH_000011;Dbxref=NCBI_GP:HIH2188184.1;Name=HIH2188184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344077.1;locus_tag=ACYKJH_000011;product=hypothetical protein;protein_id=HIH2188184.1;transl_table=11 DBLQKK010000001.1 tpg gene 9060 9548 . - . ID=gene-ACYKJH_000012;Name=ACYKJH_000012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000012 DBLQKK010000001.1 Protein Homology CDS 9060 9548 . - 0 ID=cds-HIH2188185.1;Parent=gene-ACYKJH_000012;Dbxref=NCBI_GP:HIH2188185.1;Name=HIH2188185.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344076.1;locus_tag=ACYKJH_000012;product=HAD-IIIA family hydrolase;protein_id=HIH2188185.1;transl_table=11 DBLQKK010000001.1 tpg gene 9554 10381 . - . ID=gene-ACYKJH_000013;Name=ACYKJH_000013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000013 DBLQKK010000001.1 Protein Homology CDS 9554 10381 . - 0 ID=cds-HIH2188186.1;Parent=gene-ACYKJH_000013;Dbxref=NCBI_GP:HIH2188186.1;Name=HIH2188186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344075.1;locus_tag=ACYKJH_000013;product=septal ring lytic transglycosylase RlpA family protein;protein_id=HIH2188186.1;transl_table=11 DBLQKK010000001.1 tpg gene 10341 11459 . - . ID=gene-ACYKJH_000014;Name=ACYKJH_000014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000014 DBLQKK010000001.1 Protein Homology CDS 10341 11459 . - 0 ID=cds-HIH2188187.1;Parent=gene-ACYKJH_000014;Dbxref=NCBI_GP:HIH2188187.1;Name=HIH2188187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344074.1;locus_tag=ACYKJH_000014;product=transglycosylase SLT domain-containing protein;protein_id=HIH2188187.1;transl_table=11 DBLQKK010000001.1 tpg gene 11459 12274 . - . ID=gene-ACYKJH_000015;Name=ACYKJH_000015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000015 DBLQKK010000001.1 Protein Homology CDS 11459 12274 . - 0 ID=cds-HIH2188188.1;Parent=gene-ACYKJH_000015;Dbxref=NCBI_GP:HIH2188188.1;Name=HIH2188188.1;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344073.1;locus_tag=ACYKJH_000015;product=TatD family hydrolase;protein_id=HIH2188188.1;transl_table=11 DBLQKK010000001.1 tpg gene 12265 13509 . - . ID=gene-ACYKJH_000016;Name=cbrR;gbkey=Gene;gene=cbrR;gene_biotype=protein_coding;locus_tag=ACYKJH_000016 DBLQKK010000001.1 Protein Homology CDS 12265 13509 . - 0 ID=cds-HIH2188189.1;Parent=gene-ACYKJH_000016;Dbxref=NCBI_GP:HIH2188189.1;Name=HIH2188189.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cbrR;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344072.1;locus_tag=ACYKJH_000016;product=bile resistance response regulator CbrR;protein_id=HIH2188189.1;transl_table=11 DBLQKK010000001.1 tpg gene 13615 15138 . - . ID=gene-ACYKJH_000017;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=ACYKJH_000017 DBLQKK010000001.1 Protein Homology CDS 13615 15138 . - 0 ID=cds-HIH2188190.1;Parent=gene-ACYKJH_000017;Dbxref=NCBI_GP:HIH2188190.1;Name=HIH2188190.1;Ontology_term=GO:0006302,GO:0016887;gbkey=CDS;gene=recN;go_function=ATP hydrolysis activity|0016887||IEA;go_process=double-strand break repair|0006302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344071.1;locus_tag=ACYKJH_000017;product=AAA family ATPase;protein_id=HIH2188190.1;transl_table=11 DBLQKK010000001.1 tpg gene 15138 15998 . - . ID=gene-ACYKJH_000018;Name=ACYKJH_000018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000018 DBLQKK010000001.1 Protein Homology CDS 15138 15998 . - 0 ID=cds-HIH2188191.1;Parent=gene-ACYKJH_000018;Dbxref=NCBI_GP:HIH2188191.1;Name=HIH2188191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344070.1;locus_tag=ACYKJH_000018;product=NAD(+) kinase;protein_id=HIH2188191.1;transl_table=11 DBLQKK010000001.1 tpg gene 16089 17840 . + . ID=gene-ACYKJH_000019;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=ACYKJH_000019 DBLQKK010000001.1 Protein Homology CDS 16089 17840 . + 0 ID=cds-HIH2188192.1;Parent=gene-ACYKJH_000019;Dbxref=NCBI_GP:HIH2188192.1;Name=HIH2188192.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344069.1;locus_tag=ACYKJH_000019;product=aspartate--tRNA ligase;protein_id=HIH2188192.1;transl_table=11 DBLQKK010000001.1 tpg gene 17837 18415 . + . ID=gene-ACYKJH_000020;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=ACYKJH_000020 DBLQKK010000001.1 Protein Homology CDS 17837 18415 . + 0 ID=cds-HIH2188193.1;Parent=gene-ACYKJH_000020;Dbxref=NCBI_GP:HIH2188193.1;Name=HIH2188193.1;Ontology_term=GO:0006139,GO:0019205;gbkey=CDS;gene=adk;go_function=nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344068.1;locus_tag=ACYKJH_000020;product=adenylate kinase;protein_id=HIH2188193.1;transl_table=11 DBLQKK010000001.1 tpg gene 18425 18943 . + . ID=gene-ACYKJH_000021;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=ACYKJH_000021 DBLQKK010000001.1 Protein Homology CDS 18425 18943 . + 0 ID=cds-HIH2188194.1;Parent=gene-ACYKJH_000021;Dbxref=NCBI_GP:HIH2188194.1;Name=HIH2188194.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344067.1;locus_tag=ACYKJH_000021;product=inorganic diphosphatase;protein_id=HIH2188194.1;transl_table=11 DBLQKK010000001.1 tpg gene 18985 19482 . + . ID=gene-ACYKJH_000022;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=ACYKJH_000022 DBLQKK010000001.1 Protein Homology CDS 18985 19482 . + 0 ID=cds-HIH2188195.1;Parent=gene-ACYKJH_000022;Dbxref=NCBI_GP:HIH2188195.1;Name=HIH2188195.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344066.1;locus_tag=ACYKJH_000022;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=HIH2188195.1;transl_table=11 DBLQKK010000001.1 tpg gene 19658 20497 . - . ID=gene-ACYKJH_000023;Name=ACYKJH_000023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000023 DBLQKK010000001.1 Protein Homology CDS 19658 20497 . - 0 ID=cds-HIH2188196.1;Parent=gene-ACYKJH_000023;Dbxref=NCBI_GP:HIH2188196.1;Name=HIH2188196.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344065.1;locus_tag=ACYKJH_000023;product=RsmB/NOP family class I SAM-dependent RNA methyltransferase;protein_id=HIH2188196.1;transl_table=11 DBLQKK010000001.1 tpg gene 20526 20909 . - . ID=gene-ACYKJH_000024;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=ACYKJH_000024 DBLQKK010000001.1 Protein Homology CDS 20526 20909 . - 0 ID=cds-HIH2188197.1;Parent=gene-ACYKJH_000024;Dbxref=NCBI_GP:HIH2188197.1;Name=HIH2188197.1;gbkey=CDS;gene=ruvX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344064.1;locus_tag=ACYKJH_000024;product=Holliday junction resolvase RuvX;protein_id=HIH2188197.1;transl_table=11 DBLQKK010000001.1 tpg gene 20906 21679 . - . ID=gene-ACYKJH_000025;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=ACYKJH_000025 DBLQKK010000001.1 Protein Homology CDS 20906 21679 . - 0 ID=cds-HIH2188198.1;Parent=gene-ACYKJH_000025;Dbxref=NCBI_GP:HIH2188198.1;Name=HIH2188198.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002825342.1;locus_tag=ACYKJH_000025;product=DNA-processing protein DprA;protein_id=HIH2188198.1;transl_table=11 DBLQKK010000001.1 tpg gene 21669 22751 . - . ID=gene-ACYKJH_000026;Name=ACYKJH_000026;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000026 DBLQKK010000001.1 Protein Homology CDS 21669 22751 . - 0 ID=cds-HIH2188199.1;Parent=gene-ACYKJH_000026;Dbxref=NCBI_GP:HIH2188199.1;Name=HIH2188199.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344062.1;locus_tag=ACYKJH_000026;product=divergent polysaccharide deacetylase family protein;protein_id=HIH2188199.1;transl_table=11 DBLQKK010000001.1 tpg gene 22755 23777 . - . ID=gene-ACYKJH_000027;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=ACYKJH_000027 DBLQKK010000001.1 Protein Homology CDS 22755 23777 . - 0 ID=cds-HIH2188200.1;Parent=gene-ACYKJH_000027;Dbxref=NCBI_GP:HIH2188200.1;Name=HIH2188200.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344061.1;locus_tag=ACYKJH_000027;product=ketol-acid reductoisomerase;protein_id=HIH2188200.1;transl_table=11 DBLQKK010000001.1 tpg gene 23896 25830 . + . ID=gene-ACYKJH_000028;Name=ACYKJH_000028;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000028 DBLQKK010000001.1 Protein Homology CDS 23896 25830 . + 0 ID=cds-HIH2188201.1;Parent=gene-ACYKJH_000028;Dbxref=NCBI_GP:HIH2188201.1;Name=HIH2188201.1;Ontology_term=GO:0003723,GO:0004540;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344060.1;locus_tag=ACYKJH_000028;product=RNB domain-containing ribonuclease;protein_id=HIH2188201.1;transl_table=11 DBLQKK010000001.1 tpg gene 25823 26788 . + . ID=gene-ACYKJH_000029;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=ACYKJH_000029 DBLQKK010000001.1 Protein Homology CDS 25823 26788 . + 0 ID=cds-HIH2188202.1;Parent=gene-ACYKJH_000029;Dbxref=NCBI_GP:HIH2188202.1;Name=HIH2188202.1;Ontology_term=GO:0006260,GO:0006261,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA,DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344059.1;locus_tag=ACYKJH_000029;product=DNA polymerase III subunit delta;protein_id=HIH2188202.1;transl_table=11 DBLQKK010000001.1 tpg gene 26790 27134 . - . ID=gene-ACYKJH_000030;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=ACYKJH_000030 DBLQKK010000001.1 Protein Homology CDS 26790 27134 . - 0 ID=cds-HIH2188203.1;Parent=gene-ACYKJH_000030;Dbxref=NCBI_GP:HIH2188203.1;Name=HIH2188203.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344057.1;locus_tag=ACYKJH_000030;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=HIH2188203.1;transl_table=11 DBLQKK010000001.1 tpg gene 27134 28108 . - . ID=gene-ACYKJH_000031;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=ACYKJH_000031 DBLQKK010000001.1 Protein Homology CDS 27134 28108 . - 0 ID=cds-HIH2188204.1;Parent=gene-ACYKJH_000031;Dbxref=NCBI_GP:HIH2188204.1;Name=HIH2188204.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344056.1;locus_tag=ACYKJH_000031;product=hydrogenase expression/formation protein HypE;protein_id=HIH2188204.1;transl_table=11 DBLQKK010000001.1 tpg gene 28105 29196 . - . ID=gene-ACYKJH_000032;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=ACYKJH_000032 DBLQKK010000001.1 Protein Homology CDS 28105 29196 . - 0 ID=cds-HIH2188205.1;Parent=gene-ACYKJH_000032;Dbxref=NCBI_GP:HIH2188205.1;Name=HIH2188205.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002862857.1;locus_tag=ACYKJH_000032;product=hydrogenase formation protein HypD;protein_id=HIH2188205.1;transl_table=11 DBLQKK010000001.1 tpg gene 29180 29461 . - . ID=gene-ACYKJH_000033;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=ACYKJH_000033 DBLQKK010000001.1 Protein Homology CDS 29180 29461 . - 0 ID=cds-HIH2188206.1;Parent=gene-ACYKJH_000033;Dbxref=NCBI_GP:HIH2188206.1;Name=HIH2188206.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344054.1;locus_tag=ACYKJH_000033;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=HIH2188206.1;transl_table=11 DBLQKK010000001.1 tpg gene 29461 30204 . - . ID=gene-ACYKJH_000034;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=ACYKJH_000034 DBLQKK010000001.1 Protein Homology CDS 29461 30204 . - 0 ID=cds-HIH2188207.1;Parent=gene-ACYKJH_000034;Dbxref=NCBI_GP:HIH2188207.1;Name=HIH2188207.1;Ontology_term=GO:0036211,GO:0051604,GO:0000166,GO:0003924,GO:0016151,GO:0016530;gbkey=CDS;gene=hypB;go_function=nucleotide binding|0000166||IEA,GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA,metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344053.1;locus_tag=ACYKJH_000034;product=hydrogenase nickel incorporation protein HypB;protein_id=HIH2188207.1;transl_table=11 DBLQKK010000001.1 tpg gene 30278 32464 . - . ID=gene-ACYKJH_000035;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=ACYKJH_000035 DBLQKK010000001.1 Protein Homology CDS 30278 32464 . - 0 ID=cds-HIH2188208.1;Parent=gene-ACYKJH_000035;Dbxref=NCBI_GP:HIH2188208.1;Name=HIH2188208.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002785894.1;locus_tag=ACYKJH_000035;product=carbamoyltransferase HypF;protein_id=HIH2188208.1;transl_table=11 DBLQKK010000001.1 tpg gene 32445 33965 . - . ID=gene-ACYKJH_000036;Name=ACYKJH_000036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000036 DBLQKK010000001.1 Protein Homology CDS 32445 33965 . - 0 ID=cds-HIH2188209.1;Parent=gene-ACYKJH_000036;Dbxref=NCBI_GP:HIH2188209.1;Name=HIH2188209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344051.1;locus_tag=ACYKJH_000036;product=hypothetical protein;protein_id=HIH2188209.1;transl_table=11 DBLQKK010000001.1 tpg gene 34007 34654 . - . ID=gene-ACYKJH_000037;Name=ACYKJH_000037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000037 DBLQKK010000001.1 Protein Homology CDS 34007 34654 . - 0 ID=cds-HIH2188210.1;Parent=gene-ACYKJH_000037;Dbxref=NCBI_GP:HIH2188210.1;Name=HIH2188210.1;Ontology_term=GO:0006508,GO:0008233,GO:0008237,GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=peptidase activity|0008233||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344050.1;locus_tag=ACYKJH_000037;product=M48 family metallopeptidase;protein_id=HIH2188210.1;transl_table=11 DBLQKK010000001.1 tpg gene 34630 35946 . - . ID=gene-ACYKJH_000038;Name=ACYKJH_000038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000038 DBLQKK010000001.1 Protein Homology CDS 34630 35946 . - 0 ID=cds-HIH2188211.1;Parent=gene-ACYKJH_000038;Dbxref=NCBI_GP:HIH2188211.1;Name=HIH2188211.1;Ontology_term=GO:0006855,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344049.1;locus_tag=ACYKJH_000038;product=MATE family efflux transporter;protein_id=HIH2188211.1;transl_table=11 DBLQKK010000001.1 tpg pseudogene 36036 37263 . - . ID=gene-ACYKJH_000039;Name=ACYKJH_000039;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_000039;pseudo=true DBLQKK010000001.1 Protein Homology CDS 36036 37263 . - 0 ID=cds-ACYKJH_000039;Parent=gene-ACYKJH_000039;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002852291.1;locus_tag=ACYKJH_000039;product=DUF2920 family protein;pseudo=true;transl_table=11 DBLQKK010000001.1 tpg gene 37325 38065 . - . ID=gene-ACYKJH_000040;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=ACYKJH_000040 DBLQKK010000001.1 Protein Homology CDS 37325 38065 . - 0 ID=cds-HIH2188212.1;Parent=gene-ACYKJH_000040;Dbxref=NCBI_GP:HIH2188212.1;Name=HIH2188212.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344046.1;locus_tag=ACYKJH_000040;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=HIH2188212.1;transl_table=11 DBLQKK010000001.1 tpg gene 38062 39150 . - . ID=gene-ACYKJH_000041;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=ACYKJH_000041 DBLQKK010000001.1 Protein Homology CDS 38062 39150 . - 0 ID=cds-HIH2188213.1;Parent=gene-ACYKJH_000041;Dbxref=NCBI_GP:HIH2188213.1;Name=HIH2188213.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014472969.1;locus_tag=ACYKJH_000041;product=phosphate ABC transporter permease PstA;protein_id=HIH2188213.1;transl_table=11 DBLQKK010000001.1 tpg gene 39147 40061 . - . ID=gene-ACYKJH_000042;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=ACYKJH_000042 DBLQKK010000001.1 Protein Homology CDS 39147 40061 . - 0 ID=cds-HIH2188214.1;Parent=gene-ACYKJH_000042;Dbxref=NCBI_GP:HIH2188214.1;Name=HIH2188214.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344044.1;locus_tag=ACYKJH_000042;product=phosphate ABC transporter permease subunit PstC;protein_id=HIH2188214.1;transl_table=11 DBLQKK010000001.1 tpg gene 40071 41066 . - . ID=gene-ACYKJH_000043;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=ACYKJH_000043 DBLQKK010000001.1 Protein Homology CDS 40071 41066 . - 0 ID=cds-HIH2188215.1;Parent=gene-ACYKJH_000043;Dbxref=NCBI_GP:HIH2188215.1;Name=HIH2188215.1;gbkey=CDS;gene=pstS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344043.1;locus_tag=ACYKJH_000043;product=substrate-binding domain-containing protein;protein_id=HIH2188215.1;transl_table=11 DBLQKK010000001.1 tpg gene 41247 41750 . + . ID=gene-ACYKJH_000044;Name=ctf;gbkey=Gene;gene=ctf;gene_biotype=protein_coding;locus_tag=ACYKJH_000044 DBLQKK010000001.1 Protein Homology CDS 41247 41750 . + 0 ID=cds-HIH2188216.1;Parent=gene-ACYKJH_000044;Dbxref=NCBI_GP:HIH2188216.1;Name=HIH2188216.1;gbkey=CDS;gene=ctf;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344042.1;locus_tag=ACYKJH_000044;product=non-heme ferritin;protein_id=HIH2188216.1;transl_table=11 DBLQKK010000001.1 tpg gene 41793 43169 . + . ID=gene-ACYKJH_000045;Name=ACYKJH_000045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000045 DBLQKK010000001.1 Protein Homology CDS 41793 43169 . + 0 ID=cds-HIH2188217.1;Parent=gene-ACYKJH_000045;Dbxref=NCBI_GP:HIH2188217.1;Name=HIH2188217.1;Ontology_term=GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344041.1;locus_tag=ACYKJH_000045;product=MBOAT family O-acyltransferase;protein_id=HIH2188217.1;transl_table=11 DBLQKK010000001.1 tpg gene 43170 44180 . + . ID=gene-ACYKJH_000046;Name=ACYKJH_000046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000046 DBLQKK010000001.1 Protein Homology CDS 43170 44180 . + 0 ID=cds-HIH2188218.1;Parent=gene-ACYKJH_000046;Dbxref=NCBI_GP:HIH2188218.1;Name=HIH2188218.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344040.1;locus_tag=ACYKJH_000046;product=SGNH/GDSL hydrolase family protein;protein_id=HIH2188218.1;transl_table=11 DBLQKK010000001.1 tpg gene 44167 45345 . + . ID=gene-ACYKJH_000047;Name=ACYKJH_000047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000047 DBLQKK010000001.1 Protein Homology CDS 44167 45345 . + 0 ID=cds-HIH2188219.1;Parent=gene-ACYKJH_000047;Dbxref=NCBI_GP:HIH2188219.1;Name=HIH2188219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344039.1;locus_tag=ACYKJH_000047;product=SGNH/GDSL hydrolase family protein;protein_id=HIH2188219.1;transl_table=11 DBLQKK010000001.1 tpg gene 45348 46718 . - . ID=gene-ACYKJH_000048;Name=ACYKJH_000048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000048 DBLQKK010000001.1 Protein Homology CDS 45348 46718 . - 0 ID=cds-HIH2188220.1;Parent=gene-ACYKJH_000048;Dbxref=NCBI_GP:HIH2188220.1;Name=HIH2188220.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344038.1;locus_tag=ACYKJH_000048;product=TolC family protein;protein_id=HIH2188220.1;transl_table=11 DBLQKK010000001.1 tpg gene 46720 48645 . - . ID=gene-ACYKJH_000049;Name=ACYKJH_000049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000049 DBLQKK010000001.1 Protein Homology CDS 46720 48645 . - 0 ID=cds-HIH2188221.1;Parent=gene-ACYKJH_000049;Dbxref=NCBI_GP:HIH2188221.1;Name=HIH2188221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344037.1;locus_tag=ACYKJH_000049;product=ABC transporter permease;protein_id=HIH2188221.1;transl_table=11 DBLQKK010000001.1 tpg gene 48645 49817 . - . ID=gene-ACYKJH_000050;Name=ACYKJH_000050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000050 DBLQKK010000001.1 Protein Homology CDS 48645 49817 . - 0 ID=cds-HIH2188222.1;Parent=gene-ACYKJH_000050;Dbxref=NCBI_GP:HIH2188222.1;Name=HIH2188222.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344036.1;locus_tag=ACYKJH_000050;product=efflux RND transporter periplasmic adaptor subunit;protein_id=HIH2188222.1;transl_table=11 DBLQKK010000001.1 tpg gene 49896 51086 . - . ID=gene-ACYKJH_000051;Name=ACYKJH_000051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000051 DBLQKK010000001.1 Protein Homology CDS 49896 51086 . - 0 ID=cds-HIH2188223.1;Parent=gene-ACYKJH_000051;Dbxref=NCBI_GP:HIH2188223.1;Name=HIH2188223.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344035.1;locus_tag=ACYKJH_000051;product=M20 metallopeptidase family protein;protein_id=HIH2188223.1;transl_table=11 DBLQKK010000001.1 tpg gene 51095 51976 . - . ID=gene-ACYKJH_000052;Name=ppk2;gbkey=Gene;gene=ppk2;gene_biotype=protein_coding;locus_tag=ACYKJH_000052 DBLQKK010000001.1 Protein Homology CDS 51095 51976 . - 0 ID=cds-HIH2188224.1;Parent=gene-ACYKJH_000052;Dbxref=NCBI_GP:HIH2188224.1;Name=HIH2188224.1;Ontology_term=GO:0006793,GO:0008976;gbkey=CDS;gene=ppk2;go_function=polyphosphate kinase activity|0008976||IEA;go_process=phosphorus metabolic process|0006793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344034.1;locus_tag=ACYKJH_000052;product=polyphosphate kinase 2;protein_id=HIH2188224.1;transl_table=11 DBLQKK010000001.1 tpg gene 52071 53774 . + . ID=gene-ACYKJH_000053;Name=dsbD;gbkey=Gene;gene=dsbD;gene_biotype=protein_coding;locus_tag=ACYKJH_000053 DBLQKK010000001.1 Protein Homology CDS 52071 53774 . + 0 ID=cds-HIH2188225.1;Parent=gene-ACYKJH_000053;Dbxref=NCBI_GP:HIH2188225.1;Name=HIH2188225.1;Ontology_term=GO:0047134;gbkey=CDS;gene=dsbD;go_function=protein-disulfide reductase [NAD(P)H] activity|0047134||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344033.1;locus_tag=ACYKJH_000053;product=protein-disulfide reductase DsbD;protein_id=HIH2188225.1;transl_table=11 DBLQKK010000001.1 tpg gene 53771 54439 . + . ID=gene-ACYKJH_000054;Name=ACYKJH_000054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000054 DBLQKK010000001.1 Protein Homology CDS 53771 54439 . + 0 ID=cds-HIH2188226.1;Parent=gene-ACYKJH_000054;Dbxref=NCBI_GP:HIH2188226.1;Name=HIH2188226.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344032.1;locus_tag=ACYKJH_000054;product=MOSC domain-containing protein;protein_id=HIH2188226.1;transl_table=11 DBLQKK010000001.1 tpg gene 54490 55833 . + . ID=gene-ACYKJH_000055;Name=ACYKJH_000055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000055 DBLQKK010000001.1 Protein Homology CDS 54490 55833 . + 0 ID=cds-HIH2188227.1;Parent=gene-ACYKJH_000055;Dbxref=NCBI_GP:HIH2188227.1;Name=HIH2188227.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344031.1;locus_tag=ACYKJH_000055;product=sodium-dependent transporter;protein_id=HIH2188227.1;transl_table=11 DBLQKK010000001.1 tpg gene 55825 56700 . - . ID=gene-ACYKJH_000056;Name=ACYKJH_000056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000056 DBLQKK010000001.1 Protein Homology CDS 55825 56700 . - 0 ID=cds-HIH2188228.1;Parent=gene-ACYKJH_000056;Dbxref=NCBI_GP:HIH2188228.1;Name=HIH2188228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344030.1;locus_tag=ACYKJH_000056;product=1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase;protein_id=HIH2188228.1;transl_table=11 DBLQKK010000001.1 tpg gene 56687 57640 . - . ID=gene-ACYKJH_000057;Name=ACYKJH_000057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000057 DBLQKK010000001.1 Protein Homology CDS 56687 57640 . - 0 ID=cds-HIH2188229.1;Parent=gene-ACYKJH_000057;Dbxref=NCBI_GP:HIH2188229.1;Name=HIH2188229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344029.1;locus_tag=ACYKJH_000057;product=OmpA family protein;protein_id=HIH2188229.1;transl_table=11 DBLQKK010000001.1 tpg gene 57637 59079 . - . ID=gene-ACYKJH_000058;Name=ACYKJH_000058;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000058 DBLQKK010000001.1 Protein Homology CDS 57637 59079 . - 0 ID=cds-HIH2188230.1;Parent=gene-ACYKJH_000058;Dbxref=NCBI_GP:HIH2188230.1;Name=HIH2188230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344028.1;locus_tag=ACYKJH_000058;product=MotA/TolQ/ExbB proton channel family protein;protein_id=HIH2188230.1;transl_table=11 DBLQKK010000001.1 tpg gene 59174 60238 . - . ID=gene-ACYKJH_000059;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=ACYKJH_000059 DBLQKK010000001.1 Protein Homology CDS 59174 60238 . - 0 ID=cds-HIH2188231.1;Parent=gene-ACYKJH_000059;Dbxref=NCBI_GP:HIH2188231.1;Name=HIH2188231.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344027.1;locus_tag=ACYKJH_000059;product=class II fructose-bisphosphate aldolase;protein_id=HIH2188231.1;transl_table=11 DBLQKK010000001.1 tpg gene 60238 61059 . - . ID=gene-ACYKJH_000060;Name=peb4;gbkey=Gene;gene=peb4;gene_biotype=protein_coding;locus_tag=ACYKJH_000060 DBLQKK010000001.1 Protein Homology CDS 60238 61059 . - 0 ID=cds-HIH2188232.1;Parent=gene-ACYKJH_000060;Dbxref=NCBI_GP:HIH2188232.1;Name=HIH2188232.1;gbkey=CDS;gene=peb4;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344026.1;locus_tag=ACYKJH_000060;product=peptidylprolyl isomerase PEB4;protein_id=HIH2188232.1;transl_table=11 DBLQKK010000001.1 tpg gene 61140 61766 . + . ID=gene-ACYKJH_000061;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=ACYKJH_000061 DBLQKK010000001.1 Protein Homology CDS 61140 61766 . + 0 ID=cds-HIH2188233.1;Parent=gene-ACYKJH_000061;Dbxref=NCBI_GP:HIH2188233.1;Name=HIH2188233.1;Ontology_term=GO:0006281,GO:0140078;gbkey=CDS;gene=nth;go_function=class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344025.1;locus_tag=ACYKJH_000061;product=endonuclease III;protein_id=HIH2188233.1;transl_table=11 DBLQKK010000001.1 tpg gene 61763 62413 . + . ID=gene-ACYKJH_000062;Name=ACYKJH_000062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000062 DBLQKK010000001.1 Protein Homology CDS 61763 62413 . + 0 ID=cds-HIH2188234.1;Parent=gene-ACYKJH_000062;Dbxref=NCBI_GP:HIH2188234.1;Name=HIH2188234.1;Ontology_term=GO:0003676,GO:0016787,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344024.1;locus_tag=ACYKJH_000062;product=DNA/RNA non-specific endonuclease;protein_id=HIH2188234.1;transl_table=11 DBLQKK010000001.1 tpg gene 62424 63056 . + . ID=gene-ACYKJH_000063;Name=ACYKJH_000063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000063 DBLQKK010000001.1 Protein Homology CDS 62424 63056 . + 0 ID=cds-HIH2188235.1;Parent=gene-ACYKJH_000063;Dbxref=NCBI_GP:HIH2188235.1;Name=HIH2188235.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344023.1;locus_tag=ACYKJH_000063;product=trimeric intracellular cation channel family protein;protein_id=HIH2188235.1;transl_table=11 DBLQKK010000001.1 tpg gene 63114 63548 . + . ID=gene-ACYKJH_000064;Name=ACYKJH_000064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000064 DBLQKK010000001.1 Protein Homology CDS 63114 63548 . + 0 ID=cds-HIH2188236.1;Parent=gene-ACYKJH_000064;Dbxref=NCBI_GP:HIH2188236.1;Name=HIH2188236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344022.1;locus_tag=ACYKJH_000064;product=EexN family lipoprotein;protein_id=HIH2188236.1;transl_table=11 DBLQKK010000001.1 tpg gene 63545 63766 . + . ID=gene-ACYKJH_000065;Name=ACYKJH_000065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000065 DBLQKK010000001.1 Protein Homology CDS 63545 63766 . + 0 ID=cds-HIH2188237.1;Parent=gene-ACYKJH_000065;Dbxref=NCBI_GP:HIH2188237.1;Name=HIH2188237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344021.1;locus_tag=ACYKJH_000065;product=EexN family lipoprotein;protein_id=HIH2188237.1;transl_table=11 DBLQKK010000001.1 tpg gene 63756 64466 . - . ID=gene-ACYKJH_000066;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=ACYKJH_000066 DBLQKK010000001.1 Protein Homology CDS 63756 64466 . - 0 ID=cds-HIH2188238.1;Parent=gene-ACYKJH_000066;Dbxref=NCBI_GP:HIH2188238.1;Name=HIH2188238.1;Ontology_term=GO:0002098;gbkey=CDS;gene=cmoA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344020.1;locus_tag=ACYKJH_000066;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=HIH2188238.1;transl_table=11 DBLQKK010000001.1 tpg gene 64453 65307 . - . ID=gene-ACYKJH_000067;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=ACYKJH_000067 DBLQKK010000001.1 Protein Homology CDS 64453 65307 . - 0 ID=cds-HIH2188239.1;Parent=gene-ACYKJH_000067;Dbxref=NCBI_GP:HIH2188239.1;Name=HIH2188239.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344019.1;locus_tag=ACYKJH_000067;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=HIH2188239.1;transl_table=11 DBLQKK010000001.1 tpg gene 65273 66034 . - . ID=gene-ACYKJH_000068;Name=tlyA;gbkey=Gene;gene=tlyA;gene_biotype=protein_coding;locus_tag=ACYKJH_000068 DBLQKK010000001.1 Protein Homology CDS 65273 66034 . - 0 ID=cds-HIH2188240.1;Parent=gene-ACYKJH_000068;Dbxref=NCBI_GP:HIH2188240.1;Name=HIH2188240.1;Ontology_term=GO:0000451,GO:0003723,GO:0008649;gbkey=CDS;gene=tlyA;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344018.1;locus_tag=ACYKJH_000068;product=23S rRNA (cytidine-2'-O)-methyltransferase TlyA;protein_id=HIH2188240.1;transl_table=11 DBLQKK010000001.1 tpg gene 66031 67035 . - . ID=gene-ACYKJH_000069;Name=ACYKJH_000069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000069 DBLQKK010000001.1 Protein Homology CDS 66031 67035 . - 0 ID=cds-HIH2188241.1;Parent=gene-ACYKJH_000069;Dbxref=NCBI_GP:HIH2188241.1;Name=HIH2188241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344017.1;locus_tag=ACYKJH_000069;product=hypothetical protein;protein_id=HIH2188241.1;transl_table=11 DBLQKK010000001.1 tpg gene 67016 68959 . - . ID=gene-ACYKJH_000070;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=ACYKJH_000070 DBLQKK010000001.1 Protein Homology CDS 67016 68959 . - 0 ID=cds-HIH2188242.1;Parent=gene-ACYKJH_000070;Dbxref=NCBI_GP:HIH2188242.1;Name=HIH2188242.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344016.1;locus_tag=ACYKJH_000070;product=NAD-dependent DNA ligase LigA;protein_id=HIH2188242.1;transl_table=11 DBLQKK010000001.1 tpg gene 68960 70102 . - . ID=gene-ACYKJH_000071;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=ACYKJH_000071 DBLQKK010000001.1 Protein Homology CDS 68960 70102 . - 0 ID=cds-HIH2188243.1;Parent=gene-ACYKJH_000071;Dbxref=NCBI_GP:HIH2188243.1;Name=HIH2188243.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344015.1;locus_tag=ACYKJH_000071;product=dihydropteroate synthase;protein_id=HIH2188243.1;transl_table=11 DBLQKK010000001.1 tpg gene 70104 70703 . - . ID=gene-ACYKJH_000072;Name=ACYKJH_000072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000072 DBLQKK010000001.1 Protein Homology CDS 70104 70703 . - 0 ID=cds-HIH2188244.1;Parent=gene-ACYKJH_000072;Dbxref=NCBI_GP:HIH2188244.1;Name=HIH2188244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344014.1;locus_tag=ACYKJH_000072;product=DNA polymerase III subunit delta';protein_id=HIH2188244.1;transl_table=11 DBLQKK010000001.1 tpg gene 70709 71245 . - . ID=gene-ACYKJH_000073;Name=ACYKJH_000073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000073 DBLQKK010000001.1 Protein Homology CDS 70709 71245 . - 0 ID=cds-HIH2188245.1;Parent=gene-ACYKJH_000073;Dbxref=NCBI_GP:HIH2188245.1;Name=HIH2188245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344013.1;locus_tag=ACYKJH_000073;product=HobA family DNA replication regulator;protein_id=HIH2188245.1;transl_table=11 DBLQKK010000001.1 tpg gene 71246 72448 . - . ID=gene-ACYKJH_000074;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=ACYKJH_000074 DBLQKK010000001.1 Protein Homology CDS 71246 72448 . - 0 ID=cds-HIH2188246.1;Parent=gene-ACYKJH_000074;Dbxref=NCBI_GP:HIH2188246.1;Name=HIH2188246.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344012.1;locus_tag=ACYKJH_000074;product=aspartate kinase;protein_id=HIH2188246.1;transl_table=11 DBLQKK010000001.1 tpg gene 72450 72920 . - . ID=gene-ACYKJH_000075;Name=nudH;gbkey=Gene;gene=nudH;gene_biotype=protein_coding;locus_tag=ACYKJH_000075 DBLQKK010000001.1 Protein Homology CDS 72450 72920 . - 0 ID=cds-HIH2188247.1;Parent=gene-ACYKJH_000075;Dbxref=NCBI_GP:HIH2188247.1;Name=HIH2188247.1;gbkey=CDS;gene=nudH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344011.1;locus_tag=ACYKJH_000075;product=RNA pyrophosphohydrolase;protein_id=HIH2188247.1;transl_table=11 DBLQKK010000001.1 tpg gene 73021 74088 . + . ID=gene-ACYKJH_000076;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=ACYKJH_000076 DBLQKK010000001.1 Protein Homology CDS 73021 74088 . + 0 ID=cds-HIH2188248.1;Parent=gene-ACYKJH_000076;Dbxref=NCBI_GP:HIH2188248.1;Name=HIH2188248.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344010.1;locus_tag=ACYKJH_000076;product=radical SAM family heme chaperone HemW;protein_id=HIH2188248.1;transl_table=11 DBLQKK010000001.1 tpg pseudogene 74147 74562 . + . ID=gene-ACYKJH_000077;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=pseudogene;locus_tag=ACYKJH_000077;pseudo=true DBLQKK010000001.1 Protein Homology CDS 74147 74562 . + 0 ID=cds-ACYKJH_000077;Parent=gene-ACYKJH_000077;Note=frameshifted;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344009.1;locus_tag=ACYKJH_000077;product=Sec-independent protein translocase protein TatB;pseudo=true;transl_table=11 DBLQKK010000001.1 tpg gene 74555 75292 . + . ID=gene-ACYKJH_000078;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=ACYKJH_000078 DBLQKK010000001.1 Protein Homology CDS 74555 75292 . + 0 ID=cds-HIH2188249.1;Parent=gene-ACYKJH_000078;Dbxref=NCBI_GP:HIH2188249.1;Name=HIH2188249.1;Ontology_term=GO:0015628,GO:0005886;gbkey=CDS;gene=tatC;go_component=plasma membrane|0005886||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344008.1;locus_tag=ACYKJH_000078;product=twin-arginine translocase subunit TatC;protein_id=HIH2188249.1;transl_table=11 DBLQKK010000001.1 tpg gene 75285 76313 . + . ID=gene-ACYKJH_000079;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=ACYKJH_000079 DBLQKK010000001.1 Protein Homology CDS 75285 76313 . + 0 ID=cds-HIH2188250.1;Parent=gene-ACYKJH_000079;Dbxref=NCBI_GP:HIH2188250.1;Name=HIH2188250.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344007.1;locus_tag=ACYKJH_000079;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=HIH2188250.1;transl_table=11 DBLQKK010000001.1 tpg gene 76302 77267 . - . ID=gene-ACYKJH_000080;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=ACYKJH_000080 DBLQKK010000001.1 Protein Homology CDS 76302 77267 . - 0 ID=cds-HIH2188251.1;Parent=gene-ACYKJH_000080;Dbxref=NCBI_GP:HIH2188251.1;Name=HIH2188251.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344006.1;locus_tag=ACYKJH_000080;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=HIH2188251.1;transl_table=11 DBLQKK010000001.1 tpg gene 77264 77728 . - . ID=gene-ACYKJH_000081;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=ACYKJH_000081 DBLQKK010000001.1 Protein Homology CDS 77264 77728 . - 0 ID=cds-HIH2188252.1;Parent=gene-ACYKJH_000081;Dbxref=NCBI_GP:HIH2188252.1;Name=HIH2188252.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344005.1;locus_tag=ACYKJH_000081;product=acetolactate synthase small subunit;protein_id=HIH2188252.1;transl_table=11 DBLQKK010000001.1 tpg gene 77725 79425 . - . ID=gene-ACYKJH_000082;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=ACYKJH_000082 DBLQKK010000001.1 Protein Homology CDS 77725 79425 . - 0 ID=cds-HIH2188253.1;Parent=gene-ACYKJH_000082;Dbxref=NCBI_GP:HIH2188253.1;Name=HIH2188253.1;gbkey=CDS;gene=ilvI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344004.1;locus_tag=ACYKJH_000082;product=acetolactate synthase large subunit;protein_id=HIH2188253.1;transl_table=11 DBLQKK010000001.1 tpg gene 79443 79886 . - . ID=gene-ACYKJH_000083;Name=ACYKJH_000083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000083 DBLQKK010000001.1 Protein Homology CDS 79443 79886 . - 0 ID=cds-HIH2188254.1;Parent=gene-ACYKJH_000083;Dbxref=NCBI_GP:HIH2188254.1;Name=HIH2188254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344003.1;locus_tag=ACYKJH_000083;product=GatB/YqeY domain-containing protein;protein_id=HIH2188254.1;transl_table=11 DBLQKK010000001.1 tpg gene 79898 80917 . - . ID=gene-ACYKJH_000084;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=ACYKJH_000084 DBLQKK010000001.1 Protein Homology CDS 79898 80917 . - 0 ID=cds-HIH2188255.1;Parent=gene-ACYKJH_000084;Dbxref=NCBI_GP:HIH2188255.1;Name=HIH2188255.1;gbkey=CDS;gene=ribA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344002.1;locus_tag=ACYKJH_000084;product=bifunctional 3%2C4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II;protein_id=HIH2188255.1;transl_table=11 DBLQKK010000001.1 tpg gene 81010 81084 . + . ID=gene-ACYKJH_000085;Name=ACYKJH_000085;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_000085 DBLQKK010000001.1 tRNAscan-SE tRNA 81010 81084 . + . ID=rna-ACYKJH_000085;Parent=gene-ACYKJH_000085;anticodon=(pos:81042..81044);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000085;product=tRNA-Gln DBLQKK010000001.1 tRNAscan-SE exon 81010 81084 . + . ID=exon-ACYKJH_000085-1;Parent=rna-ACYKJH_000085;anticodon=(pos:81042..81044);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000085;product=tRNA-Gln DBLQKK010000001.1 tpg gene 81119 81194 . + . ID=gene-ACYKJH_000086;Name=ACYKJH_000086;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_000086 DBLQKK010000001.1 tRNAscan-SE tRNA 81119 81194 . + . ID=rna-ACYKJH_000086;Parent=gene-ACYKJH_000086;anticodon=(pos:81152..81154);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000086;product=tRNA-Met DBLQKK010000001.1 tRNAscan-SE exon 81119 81194 . + . ID=exon-ACYKJH_000086-1;Parent=rna-ACYKJH_000086;anticodon=(pos:81152..81154);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000086;product=tRNA-Met DBLQKK010000001.1 tpg gene 81216 82088 . - . ID=gene-ACYKJH_000087;Name=ACYKJH_000087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000087 DBLQKK010000001.1 Protein Homology CDS 81216 82088 . - 0 ID=cds-HIH2188256.1;Parent=gene-ACYKJH_000087;Dbxref=NCBI_GP:HIH2188256.1;Name=HIH2188256.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344001.1;locus_tag=ACYKJH_000087;product=helix-turn-helix transcriptional regulator;protein_id=HIH2188256.1;transl_table=11 DBLQKK010000001.1 tpg gene 82085 83152 . - . ID=gene-ACYKJH_000088;Name=ACYKJH_000088;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000088 DBLQKK010000001.1 Protein Homology CDS 82085 83152 . - 0 ID=cds-HIH2188257.1;Parent=gene-ACYKJH_000088;Dbxref=NCBI_GP:HIH2188257.1;Name=HIH2188257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344000.1;locus_tag=ACYKJH_000088;product=HP0729 family protein;protein_id=HIH2188257.1;transl_table=11 DBLQKK010000001.1 tpg gene 83161 83466 . - . ID=gene-ACYKJH_000089;Name=ACYKJH_000089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000089 DBLQKK010000001.1 Protein Homology CDS 83161 83466 . - 0 ID=cds-HIH2188258.1;Parent=gene-ACYKJH_000089;Dbxref=NCBI_GP:HIH2188258.1;Name=HIH2188258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002866447.1;locus_tag=ACYKJH_000089;product=hypothetical protein;protein_id=HIH2188258.1;transl_table=11 DBLQKK010000001.1 tpg gene 83691 83936 . - . ID=gene-ACYKJH_000090;Name=ACYKJH_000090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000090 DBLQKK010000001.1 GeneMarkS-2+ CDS 83691 83936 . - 0 ID=cds-HIH2188259.1;Parent=gene-ACYKJH_000090;Dbxref=NCBI_GP:HIH2188259.1;Name=HIH2188259.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_000090;product=hypothetical protein;protein_id=HIH2188259.1;transl_table=11 DBLQKK010000001.1 tpg gene 83940 84722 . - . ID=gene-ACYKJH_000091;Name=ACYKJH_000091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000091 DBLQKK010000001.1 GeneMarkS-2+ CDS 83940 84722 . - 0 ID=cds-HIH2188260.1;Parent=gene-ACYKJH_000091;Dbxref=NCBI_GP:HIH2188260.1;Name=HIH2188260.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_000091;product=hypothetical protein;protein_id=HIH2188260.1;transl_table=11 DBLQKK010000001.1 tpg gene 84722 86404 . - . ID=gene-ACYKJH_000092;Name=ACYKJH_000092;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000092 DBLQKK010000001.1 Protein Homology CDS 84722 86404 . - 0 ID=cds-HIH2188261.1;Parent=gene-ACYKJH_000092;Dbxref=NCBI_GP:HIH2188261.1;Name=HIH2188261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002786519.1;locus_tag=ACYKJH_000092;product=hypothetical protein;protein_id=HIH2188261.1;transl_table=11 DBLQKK010000001.1 tpg gene 86480 86686 . - . ID=gene-ACYKJH_000093;Name=ACYKJH_000093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000093 DBLQKK010000001.1 Protein Homology CDS 86480 86686 . - 0 ID=cds-HIH2188262.1;Parent=gene-ACYKJH_000093;Dbxref=NCBI_GP:HIH2188262.1;Name=HIH2188262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343995.1;locus_tag=ACYKJH_000093;product=hypothetical protein;protein_id=HIH2188262.1;transl_table=11 DBLQKK010000001.1 tpg gene 86677 87279 . - . ID=gene-ACYKJH_000094;Name=ACYKJH_000094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000094 DBLQKK010000001.1 Protein Homology CDS 86677 87279 . - 0 ID=cds-HIH2188263.1;Parent=gene-ACYKJH_000094;Dbxref=NCBI_GP:HIH2188263.1;Name=HIH2188263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343994.1;locus_tag=ACYKJH_000094;product=hypothetical protein;protein_id=HIH2188263.1;transl_table=11 DBLQKK010000001.1 tpg gene 87342 88718 . - . ID=gene-ACYKJH_000095;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=ACYKJH_000095 DBLQKK010000001.1 Protein Homology CDS 87342 88718 . - 0 ID=cds-HIH2188264.1;Parent=gene-ACYKJH_000095;Dbxref=NCBI_GP:HIH2188264.1;Name=HIH2188264.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343993.1;locus_tag=ACYKJH_000095;product=replicative DNA helicase;protein_id=HIH2188264.1;transl_table=11 DBLQKK010000001.1 tpg gene 88872 89801 . + . ID=gene-ACYKJH_000096;Name=ACYKJH_000096;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000096 DBLQKK010000001.1 Protein Homology CDS 88872 89801 . + 0 ID=cds-HIH2188265.1;Parent=gene-ACYKJH_000096;Dbxref=NCBI_GP:HIH2188265.1;Name=HIH2188265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343992.1;locus_tag=ACYKJH_000096;product=DUF2860 domain-containing protein;protein_id=HIH2188265.1;transl_table=11 DBLQKK010000001.1 tpg gene 89850 91178 . - . ID=gene-ACYKJH_000097;Name=ACYKJH_000097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000097 DBLQKK010000001.1 Protein Homology CDS 89850 91178 . - 0 ID=cds-HIH2188266.1;Parent=gene-ACYKJH_000097;Dbxref=NCBI_GP:HIH2188266.1;Name=HIH2188266.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343991.1;locus_tag=ACYKJH_000097;product=MATE family efflux transporter;protein_id=HIH2188266.1;transl_table=11 DBLQKK010000001.1 tpg gene 91359 92294 . - . ID=gene-ACYKJH_000098;Name=ACYKJH_000098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000098 DBLQKK010000001.1 Protein Homology CDS 91359 92294 . - 0 ID=cds-HIH2188267.1;Parent=gene-ACYKJH_000098;Dbxref=NCBI_GP:HIH2188267.1;Name=HIH2188267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343990.1;locus_tag=ACYKJH_000098;product=NAD(P)-binding domain-containing protein;protein_id=HIH2188267.1;transl_table=11 DBLQKK010000001.1 tpg gene 92365 93597 . + . ID=gene-ACYKJH_000099;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=ACYKJH_000099 DBLQKK010000001.1 Protein Homology CDS 92365 93597 . + 0 ID=cds-HIH2188268.1;Parent=gene-ACYKJH_000099;Dbxref=NCBI_GP:HIH2188268.1;Name=HIH2188268.1;Ontology_term=GO:0006561,GO:0004350,GO:0016620;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343989.1;locus_tag=ACYKJH_000099;product=glutamate-5-semialdehyde dehydrogenase;protein_id=HIH2188268.1;transl_table=11 DBLQKK010000001.1 tpg gene 93594 94679 . + . ID=gene-ACYKJH_000100;Name=ACYKJH_000100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000100 DBLQKK010000001.1 Protein Homology CDS 93594 94679 . + 0 ID=cds-HIH2188269.1;Parent=gene-ACYKJH_000100;Dbxref=NCBI_GP:HIH2188269.1;Name=HIH2188269.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343988.1;locus_tag=ACYKJH_000100;product=FUSC family protein;protein_id=HIH2188269.1;transl_table=11 DBLQKK010000001.1 tpg gene 94676 95473 . - . ID=gene-ACYKJH_000101;Name=ACYKJH_000101;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000101 DBLQKK010000001.1 Protein Homology CDS 94676 95473 . - 0 ID=cds-HIH2188270.1;Parent=gene-ACYKJH_000101;Dbxref=NCBI_GP:HIH2188270.1;Name=HIH2188270.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343987.1;locus_tag=ACYKJH_000101;product=amidohydrolase family protein;protein_id=HIH2188270.1;transl_table=11 DBLQKK010000001.1 tpg gene 95484 96776 . - . ID=gene-ACYKJH_000102;Name=ACYKJH_000102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000102 DBLQKK010000001.1 Protein Homology CDS 95484 96776 . - 0 ID=cds-HIH2188271.1;Parent=gene-ACYKJH_000102;Dbxref=NCBI_GP:HIH2188271.1;Name=HIH2188271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343986.1;locus_tag=ACYKJH_000102;product=SLC13 family permease;protein_id=HIH2188271.1;transl_table=11 DBLQKK010000001.1 tpg gene 96895 97899 . - . ID=gene-ACYKJH_000103;Name=ACYKJH_000103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000103 DBLQKK010000001.1 Protein Homology CDS 96895 97899 . - 0 ID=cds-HIH2188272.1;Parent=gene-ACYKJH_000103;Dbxref=NCBI_GP:HIH2188272.1;Name=HIH2188272.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022646.6;locus_tag=ACYKJH_000103;product=DUF2891 domain-containing protein;protein_id=HIH2188272.1;transl_table=11 DBLQKK010000001.1 tpg gene 97909 98862 . - . ID=gene-ACYKJH_000104;Name=ACYKJH_000104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000104 DBLQKK010000001.1 Protein Homology CDS 97909 98862 . - 0 ID=cds-HIH2188273.1;Parent=gene-ACYKJH_000104;Dbxref=NCBI_GP:HIH2188273.1;Name=HIH2188273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343984.1;locus_tag=ACYKJH_000104;product=DUF979 domain-containing protein;protein_id=HIH2188273.1;transl_table=11 DBLQKK010000001.1 tpg gene 98849 99541 . - . ID=gene-ACYKJH_000105;Name=ACYKJH_000105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000105 DBLQKK010000001.1 Protein Homology CDS 98849 99541 . - 0 ID=cds-HIH2188274.1;Parent=gene-ACYKJH_000105;Dbxref=NCBI_GP:HIH2188274.1;Name=HIH2188274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343983.1;locus_tag=ACYKJH_000105;product=DUF969 domain-containing protein;protein_id=HIH2188274.1;transl_table=11 DBLQKK010000001.1 tpg gene 99701 100270 . - . ID=gene-ACYKJH_000106;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=ACYKJH_000106 DBLQKK010000001.1 Protein Homology CDS 99701 100270 . - 0 ID=cds-HIH2188275.1;Parent=gene-ACYKJH_000106;Dbxref=NCBI_GP:HIH2188275.1;Name=HIH2188275.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343982.1;locus_tag=ACYKJH_000106;product=elongation factor P;protein_id=HIH2188275.1;transl_table=11 DBLQKK010000001.1 tpg gene 100384 100704 . + . ID=gene-ACYKJH_000107;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=ACYKJH_000107 DBLQKK010000001.1 cmsearch RNase_P_RNA 100384 100704 . + . ID=rna-ACYKJH_000107;Parent=gene-ACYKJH_000107;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKJH_000107;product=RNase P RNA component class A DBLQKK010000001.1 cmsearch exon 100384 100704 . + . ID=exon-ACYKJH_000107-1;Parent=rna-ACYKJH_000107;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKJH_000107;product=RNase P RNA component class A DBLQKK010000001.1 tpg gene 100702 100977 . - . ID=gene-ACYKJH_000108;Name=ACYKJH_000108;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000108 DBLQKK010000001.1 Protein Homology CDS 100702 100977 . - 0 ID=cds-HIH2188276.1;Parent=gene-ACYKJH_000108;Dbxref=NCBI_GP:HIH2188276.1;Name=HIH2188276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343981.1;locus_tag=ACYKJH_000108;product=hypothetical protein;protein_id=HIH2188276.1;transl_table=11 DBLQKK010000001.1 tpg gene 100958 101344 . - . ID=gene-ACYKJH_000109;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=ACYKJH_000109 DBLQKK010000001.1 Protein Homology CDS 100958 101344 . - 0 ID=cds-HIH2188277.1;Parent=gene-ACYKJH_000109;Dbxref=NCBI_GP:HIH2188277.1;Name=HIH2188277.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343980.1;locus_tag=ACYKJH_000109;product=flagellar export chaperone FliS;protein_id=HIH2188277.1;transl_table=11 DBLQKK010000001.1 tpg gene 101356 103266 . - . ID=gene-ACYKJH_000110;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=ACYKJH_000110 DBLQKK010000001.1 Protein Homology CDS 101356 103266 . - 0 ID=cds-HIH2188278.1;Parent=gene-ACYKJH_000110;Dbxref=NCBI_GP:HIH2188278.1;Name=HIH2188278.1;Ontology_term=GO:0007155,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343979.1;locus_tag=ACYKJH_000110;product=flagellar filament capping protein FliD;protein_id=HIH2188278.1;transl_table=11 DBLQKK010000001.1 tpg gene 103269 103634 . - . ID=gene-ACYKJH_000111;Name=flaG;gbkey=Gene;gene=flaG;gene_biotype=protein_coding;locus_tag=ACYKJH_000111 DBLQKK010000001.1 Protein Homology CDS 103269 103634 . - 0 ID=cds-HIH2188279.1;Parent=gene-ACYKJH_000111;Dbxref=NCBI_GP:HIH2188279.1;Name=HIH2188279.1;gbkey=CDS;gene=flaG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343978.1;locus_tag=ACYKJH_000111;product=FlaG family protein;protein_id=HIH2188279.1;transl_table=11 DBLQKK010000001.1 tpg gene 103790 105592 . - . ID=gene-ACYKJH_000112;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=ACYKJH_000112 DBLQKK010000001.1 Protein Homology CDS 103790 105592 . - 0 ID=cds-HIH2188280.1;Parent=gene-ACYKJH_000112;Dbxref=NCBI_GP:HIH2188280.1;Name=HIH2188280.1;Ontology_term=GO:0009234,GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343977.1;locus_tag=ACYKJH_000112;product=menaquinone biosynthesis decarboxylase;protein_id=HIH2188280.1;transl_table=11 DBLQKK010000001.1 tpg gene 105589 106512 . - . ID=gene-ACYKJH_000113;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=ACYKJH_000113 DBLQKK010000001.1 Protein Homology CDS 105589 106512 . - 0 ID=cds-HIH2188281.1;Parent=gene-ACYKJH_000113;Dbxref=NCBI_GP:HIH2188281.1;Name=HIH2188281.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343976.1;locus_tag=ACYKJH_000113;product=hydroxymethylbilane synthase;protein_id=HIH2188281.1;transl_table=11 DBLQKK010000001.1 tpg gene 106509 106898 . - . ID=gene-ACYKJH_000114;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=ACYKJH_000114 DBLQKK010000001.1 Protein Homology CDS 106509 106898 . - 0 ID=cds-HIH2188282.1;Parent=gene-ACYKJH_000114;Dbxref=NCBI_GP:HIH2188282.1;Name=HIH2188282.1;gbkey=CDS;gene=fxsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343975.1;locus_tag=ACYKJH_000114;product=FxsA family membrane protein;protein_id=HIH2188282.1;transl_table=11 DBLQKK010000001.1 tpg gene 106895 108604 . - . ID=gene-ACYKJH_000115;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=ACYKJH_000115 DBLQKK010000001.1 Protein Homology CDS 106895 108604 . - 0 ID=cds-HIH2188283.1;Parent=gene-ACYKJH_000115;Dbxref=NCBI_GP:HIH2188283.1;Name=HIH2188283.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;gene=proS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA deacylase activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343974.1;locus_tag=ACYKJH_000115;product=proline--tRNA ligase;protein_id=HIH2188283.1;transl_table=11 DBLQKK010000001.1 tpg gene 108588 109886 . - . ID=gene-ACYKJH_000116;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=ACYKJH_000116 DBLQKK010000001.1 Protein Homology CDS 108588 109886 . - 0 ID=cds-HIH2188284.1;Parent=gene-ACYKJH_000116;Dbxref=NCBI_GP:HIH2188284.1;Name=HIH2188284.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343973.1;locus_tag=ACYKJH_000116;product=glutamyl-tRNA reductase;protein_id=HIH2188284.1;transl_table=11 DBLQKK010000001.1 tpg gene 109886 110779 . - . ID=gene-ACYKJH_000117;Name=ACYKJH_000117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000117 DBLQKK010000001.1 Protein Homology CDS 109886 110779 . - 0 ID=cds-HIH2188285.1;Parent=gene-ACYKJH_000117;Dbxref=NCBI_GP:HIH2188285.1;Name=HIH2188285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343972.1;locus_tag=ACYKJH_000117;product=hexaprenyl-diphosphate synthase;protein_id=HIH2188285.1;transl_table=11 DBLQKK010000001.1 tpg gene 110793 111329 . - . ID=gene-ACYKJH_000118;Name=ACYKJH_000118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000118 DBLQKK010000001.1 Protein Homology CDS 110793 111329 . - 0 ID=cds-HIH2188286.1;Parent=gene-ACYKJH_000118;Dbxref=NCBI_GP:HIH2188286.1;Name=HIH2188286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343971.1;locus_tag=ACYKJH_000118;product=exporting protein;protein_id=HIH2188286.1;transl_table=11 DBLQKK010000001.1 tpg gene 111332 111595 . - . ID=gene-ACYKJH_000119;Name=ACYKJH_000119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000119 DBLQKK010000001.1 Protein Homology CDS 111332 111595 . - 0 ID=cds-HIH2188287.1;Parent=gene-ACYKJH_000119;Dbxref=NCBI_GP:HIH2188287.1;Name=HIH2188287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343970.1;locus_tag=ACYKJH_000119;product=DUF2018 family protein;protein_id=HIH2188287.1;transl_table=11 DBLQKK010000001.1 tpg gene 111734 112291 . - . ID=gene-ACYKJH_000120;Name=oorC;gbkey=Gene;gene=oorC;gene_biotype=protein_coding;locus_tag=ACYKJH_000120 DBLQKK010000001.1 Protein Homology CDS 111734 112291 . - 0 ID=cds-HIH2188288.1;Parent=gene-ACYKJH_000120;Dbxref=NCBI_GP:HIH2188288.1;Name=HIH2188288.1;Ontology_term=GO:0016903;gbkey=CDS;gene=oorC;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343969.1;locus_tag=ACYKJH_000120;product=2-oxoacid:acceptor oxidoreductase family protein;protein_id=HIH2188288.1;transl_table=11 DBLQKK010000001.1 tpg gene 112288 113133 . - . ID=gene-ACYKJH_000121;Name=oorB;gbkey=Gene;gene=oorB;gene_biotype=protein_coding;locus_tag=ACYKJH_000121 DBLQKK010000001.1 Protein Homology CDS 112288 113133 . - 0 ID=cds-HIH2188289.1;Parent=gene-ACYKJH_000121;Dbxref=NCBI_GP:HIH2188289.1;Name=HIH2188289.1;gbkey=CDS;gene=oorB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343968.1;locus_tag=ACYKJH_000121;product=2-oxoglutarate ferredoxin oxidoreductase subunit beta;protein_id=HIH2188289.1;transl_table=11 DBLQKK010000001.1 tpg gene 113134 114258 . - . ID=gene-ACYKJH_000122;Name=oorA;gbkey=Gene;gene=oorA;gene_biotype=protein_coding;locus_tag=ACYKJH_000122 DBLQKK010000001.1 Protein Homology CDS 113134 114258 . - 0 ID=cds-HIH2188290.1;Parent=gene-ACYKJH_000122;Dbxref=NCBI_GP:HIH2188290.1;Name=HIH2188290.1;Ontology_term=GO:0016491;gbkey=CDS;gene=oorA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343967.1;locus_tag=ACYKJH_000122;product=2-oxoglutarate synthase subunit alpha;protein_id=HIH2188290.1;transl_table=11 DBLQKK010000001.1 tpg gene 114267 114578 . - . ID=gene-ACYKJH_000123;Name=oorD;gbkey=Gene;gene=oorD;gene_biotype=protein_coding;locus_tag=ACYKJH_000123 DBLQKK010000001.1 Protein Homology CDS 114267 114578 . - 0 ID=cds-HIH2188291.1;Parent=gene-ACYKJH_000123;Dbxref=NCBI_GP:HIH2188291.1;Name=HIH2188291.1;gbkey=CDS;gene=oorD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343966.1;locus_tag=ACYKJH_000123;product=4Fe-4S binding protein;protein_id=HIH2188291.1;transl_table=11 DBLQKK010000001.1 tpg gene 114592 115461 . - . ID=gene-ACYKJH_000124;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=ACYKJH_000124 DBLQKK010000001.1 Protein Homology CDS 114592 115461 . - 0 ID=cds-HIH2188292.1;Parent=gene-ACYKJH_000124;Dbxref=NCBI_GP:HIH2188292.1;Name=HIH2188292.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343965.1;locus_tag=ACYKJH_000124;product=succinate--CoA ligase subunit alpha;protein_id=HIH2188292.1;transl_table=11 DBLQKK010000001.1 tpg gene 115471 116634 . - . ID=gene-ACYKJH_000125;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=ACYKJH_000125 DBLQKK010000001.1 Protein Homology CDS 115471 116634 . - 0 ID=cds-HIH2188293.1;Parent=gene-ACYKJH_000125;Dbxref=NCBI_GP:HIH2188293.1;Name=HIH2188293.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343964.1;locus_tag=ACYKJH_000125;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=HIH2188293.1;transl_table=11 DBLQKK010000001.1 tpg gene 116635 117537 . - . ID=gene-ACYKJH_000126;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=ACYKJH_000126 DBLQKK010000001.1 Protein Homology CDS 116635 117537 . - 0 ID=cds-HIH2188294.1;Parent=gene-ACYKJH_000126;Dbxref=NCBI_GP:HIH2188294.1;Name=HIH2188294.1;gbkey=CDS;gene=mdh;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343963.1;locus_tag=ACYKJH_000126;product=malate dehydrogenase;protein_id=HIH2188294.1;transl_table=11 DBLQKK010000001.1 tpg gene 117534 119738 . - . ID=gene-ACYKJH_000127;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=ACYKJH_000127 DBLQKK010000001.1 Protein Homology CDS 117534 119738 . - 0 ID=cds-HIH2188295.1;Parent=gene-ACYKJH_000127;Dbxref=NCBI_GP:HIH2188295.1;Name=HIH2188295.1;Ontology_term=GO:0006099,GO:0004450;gbkey=CDS;gene=icd;go_function=isocitrate dehydrogenase (NADP+) activity|0004450||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343962.1;locus_tag=ACYKJH_000127;product=NADP-dependent isocitrate dehydrogenase;protein_id=HIH2188295.1;transl_table=11 DBLQKK010000001.1 tpg gene 119855 122425 . - . ID=gene-ACYKJH_000128;Name=ACYKJH_000128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000128 DBLQKK010000001.1 Protein Homology CDS 119855 122425 . - 0 ID=cds-HIH2188296.1;Parent=gene-ACYKJH_000128;Dbxref=NCBI_GP:HIH2188296.1;Name=HIH2188296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343961.1;locus_tag=ACYKJH_000128;product=AsmA-like C-terminal domain-containing protein;protein_id=HIH2188296.1;transl_table=11 DBLQKK010000001.1 tpg gene 122340 123341 . + . ID=gene-ACYKJH_000129;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=ACYKJH_000129 DBLQKK010000001.1 Protein Homology CDS 122340 123341 . + 0 ID=cds-HIH2188297.1;Parent=gene-ACYKJH_000129;Dbxref=NCBI_GP:HIH2188297.1;Name=HIH2188297.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343960.1;locus_tag=ACYKJH_000129;product=endolytic transglycosylase MltG;protein_id=HIH2188297.1;transl_table=11 DBLQKK010000001.1 tpg gene 123421 123852 . + . ID=gene-ACYKJH_000130;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=ACYKJH_000130 DBLQKK010000001.1 Protein Homology CDS 123421 123852 . + 0 ID=cds-HIH2188298.1;Parent=gene-ACYKJH_000130;Dbxref=NCBI_GP:HIH2188298.1;Name=HIH2188298.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343959.1;locus_tag=ACYKJH_000130;product=flagellar basal body rod protein FlgB;protein_id=HIH2188298.1;transl_table=11 DBLQKK010000001.1 tpg gene 123862 124356 . + . ID=gene-ACYKJH_000131;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=ACYKJH_000131 DBLQKK010000001.1 Protein Homology CDS 123862 124356 . + 0 ID=cds-HIH2188299.1;Parent=gene-ACYKJH_000131;Dbxref=NCBI_GP:HIH2188299.1;Name=HIH2188299.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343958.1;locus_tag=ACYKJH_000131;product=flagellar basal body rod protein FlgC;protein_id=HIH2188299.1;transl_table=11 DBLQKK010000001.1 tpg gene 124363 124659 . + . ID=gene-ACYKJH_000132;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=ACYKJH_000132 DBLQKK010000001.1 Protein Homology CDS 124363 124659 . + 0 ID=cds-HIH2188300.1;Parent=gene-ACYKJH_000132;Dbxref=NCBI_GP:HIH2188300.1;Name=HIH2188300.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343957.1;locus_tag=ACYKJH_000132;product=flagellar hook-basal body complex protein FliE;protein_id=HIH2188300.1;transl_table=11 DBLQKK010000001.1 tpg gene 124666 126456 . + . ID=gene-ACYKJH_000133;Name=pbpB;gbkey=Gene;gene=pbpB;gene_biotype=protein_coding;locus_tag=ACYKJH_000133 DBLQKK010000001.1 Protein Homology CDS 124666 126456 . + 0 ID=cds-HIH2188301.1;Parent=gene-ACYKJH_000133;Dbxref=NCBI_GP:HIH2188301.1;Name=HIH2188301.1;Ontology_term=GO:0009252,GO:0051301,GO:0071555,GO:0008658,GO:0008955,GO:0009002,GO:0016787,GO:0005886,GO:0016020;gbkey=CDS;gene=pbpB;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887692.1;locus_tag=ACYKJH_000133;product=peptidoglycan D%2CD-transpeptidase FtsI family protein;protein_id=HIH2188301.1;transl_table=11 DBLQKK010000001.1 tpg gene 126471 128240 . - . ID=gene-ACYKJH_000134;Name=ACYKJH_000134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000134 DBLQKK010000001.1 Protein Homology CDS 126471 128240 . - 0 ID=cds-HIH2188302.1;Parent=gene-ACYKJH_000134;Dbxref=NCBI_GP:HIH2188302.1;Name=HIH2188302.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002867673.1;locus_tag=ACYKJH_000134;product=Na/Pi cotransporter family protein;protein_id=HIH2188302.1;transl_table=11 DBLQKK010000001.1 tpg gene 128244 128678 . - . ID=gene-ACYKJH_000135;Name=ACYKJH_000135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000135 DBLQKK010000001.1 Protein Homology CDS 128244 128678 . - 0 ID=cds-HIH2188303.1;Parent=gene-ACYKJH_000135;Dbxref=NCBI_GP:HIH2188303.1;Name=HIH2188303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343952.1;locus_tag=ACYKJH_000135;product=hypothetical protein;protein_id=HIH2188303.1;transl_table=11 DBLQKK010000001.1 tpg gene 128678 128995 . - . ID=gene-ACYKJH_000136;Name=ACYKJH_000136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000136 DBLQKK010000001.1 Protein Homology CDS 128678 128995 . - 0 ID=cds-HIH2188304.1;Parent=gene-ACYKJH_000136;Dbxref=NCBI_GP:HIH2188304.1;Name=HIH2188304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343951.1;locus_tag=ACYKJH_000136;product=rhodanese-like domain-containing protein;protein_id=HIH2188304.1;transl_table=11 DBLQKK010000001.1 tpg gene 128992 130818 . - . ID=gene-ACYKJH_000137;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=ACYKJH_000137 DBLQKK010000001.1 Protein Homology CDS 128992 130818 . - 0 ID=cds-HIH2188305.1;Parent=gene-ACYKJH_000137;Dbxref=NCBI_GP:HIH2188305.1;Name=HIH2188305.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343950.1;locus_tag=ACYKJH_000137;product=molecular chaperone HtpG;protein_id=HIH2188305.1;transl_table=11 DBLQKK010000001.1 tpg gene 130891 131259 . - . ID=gene-ACYKJH_000138;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=ACYKJH_000138 DBLQKK010000001.1 Protein Homology CDS 130891 131259 . - 0 ID=cds-HIH2188306.1;Parent=gene-ACYKJH_000138;Dbxref=NCBI_GP:HIH2188306.1;Name=HIH2188306.1;Ontology_term=GO:1903424,GO:1903425,GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;go_function=fluoride transmembrane transporter activity|1903425||IEA;go_process=fluoride transmembrane transport|1903424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343949.1;locus_tag=ACYKJH_000138;product=fluoride efflux transporter CrcB;protein_id=HIH2188306.1;transl_table=11 DBLQKK010000001.1 tpg gene 131253 131945 . - . ID=gene-ACYKJH_000139;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;locus_tag=ACYKJH_000139 DBLQKK010000001.1 Protein Homology CDS 131253 131945 . - 0 ID=cds-HIH2188307.1;Parent=gene-ACYKJH_000139;Dbxref=NCBI_GP:HIH2188307.1;Name=HIH2188307.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343948.1;locus_tag=ACYKJH_000139;product=lysophospholipid acyltransferase family protein;protein_id=HIH2188307.1;transl_table=11 DBLQKK010000001.1 tpg gene 131926 133122 . - . ID=gene-ACYKJH_000140;Name=ACYKJH_000140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000140 DBLQKK010000001.1 Protein Homology CDS 131926 133122 . - 0 ID=cds-HIH2188308.1;Parent=gene-ACYKJH_000140;Dbxref=NCBI_GP:HIH2188308.1;Name=HIH2188308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343947.1;locus_tag=ACYKJH_000140;product=SH3 domain-containing protein;protein_id=HIH2188308.1;transl_table=11 DBLQKK010000001.1 tpg pseudogene 133094 133766 . - . ID=gene-ACYKJH_000141;Name=purQ;gbkey=Gene;gene=purQ;gene_biotype=pseudogene;locus_tag=ACYKJH_000141;pseudo=true DBLQKK010000001.1 Protein Homology CDS 133094 133766 . - 0 ID=cds-ACYKJH_000141;Parent=gene-ACYKJH_000141;Note=frameshifted;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purQ;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343946.1;locus_tag=ACYKJH_000141;product=phosphoribosylformylglycinamidine synthase I;pseudo=true;transl_table=11 DBLQKK010000001.1 tpg gene 133768 134013 . - . ID=gene-ACYKJH_000142;Name=purS;gbkey=Gene;gene=purS;gene_biotype=protein_coding;locus_tag=ACYKJH_000142 DBLQKK010000001.1 Protein Homology CDS 133768 134013 . - 0 ID=cds-HIH2188309.1;Parent=gene-ACYKJH_000142;Dbxref=NCBI_GP:HIH2188309.1;Name=HIH2188309.1;Ontology_term=GO:0009152,GO:0004642;gbkey=CDS;gene=purS;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343945.1;locus_tag=ACYKJH_000142;product=phosphoribosylformylglycinamidine synthase subunit PurS;protein_id=HIH2188309.1;transl_table=11 DBLQKK010000001.1 tpg gene 134022 134732 . - . ID=gene-ACYKJH_000143;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=ACYKJH_000143 DBLQKK010000001.1 Protein Homology CDS 134022 134732 . - 0 ID=cds-HIH2188310.1;Parent=gene-ACYKJH_000143;Dbxref=NCBI_GP:HIH2188310.1;Name=HIH2188310.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343944.1;locus_tag=ACYKJH_000143;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=HIH2188310.1;transl_table=11 DBLQKK010000001.1 tpg gene 134734 136068 . - . ID=gene-ACYKJH_000144;Name=ACYKJH_000144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000144 DBLQKK010000001.1 Protein Homology CDS 134734 136068 . - 0 ID=cds-HIH2188311.1;Parent=gene-ACYKJH_000144;Dbxref=NCBI_GP:HIH2188311.1;Name=HIH2188311.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343943.1;locus_tag=ACYKJH_000144;product=S41 family peptidase;protein_id=HIH2188311.1;transl_table=11 DBLQKK010000001.1 tpg gene 136195 136485 . + . ID=gene-ACYKJH_000145;Name=ACYKJH_000145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000145 DBLQKK010000001.1 Protein Homology CDS 136195 136485 . + 0 ID=cds-HIH2188312.1;Parent=gene-ACYKJH_000145;Dbxref=NCBI_GP:HIH2188312.1;Name=HIH2188312.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343942.1;locus_tag=ACYKJH_000145;product=metal-sensing transcriptional repressor;protein_id=HIH2188312.1;transl_table=11 DBLQKK010000001.1 tpg gene 136597 139170 . + . ID=gene-ACYKJH_000146;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=ACYKJH_000146 DBLQKK010000001.1 Protein Homology CDS 136597 139170 . + 0 ID=cds-HIH2188313.1;Parent=gene-ACYKJH_000146;Dbxref=NCBI_GP:HIH2188313.1;Name=HIH2188313.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343941.1;locus_tag=ACYKJH_000146;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=HIH2188313.1;transl_table=11 DBLQKK010000001.1 tpg gene 139198 141129 . - . ID=gene-ACYKJH_000147;Name=pbpA;gbkey=Gene;gene=pbpA;gene_biotype=protein_coding;locus_tag=ACYKJH_000147 DBLQKK010000001.1 Protein Homology CDS 139198 141129 . - 0 ID=cds-HIH2188314.1;Parent=gene-ACYKJH_000147;Dbxref=NCBI_GP:HIH2188314.1;Name=HIH2188314.1;gbkey=CDS;gene=pbpA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343940.1;locus_tag=ACYKJH_000147;product=penicillin-binding protein 1A;protein_id=HIH2188314.1;transl_table=11 DBLQKK010000001.1 tpg gene 141126 141677 . - . ID=gene-ACYKJH_000148;Name=maf;gbkey=Gene;gene=maf;gene_biotype=protein_coding;locus_tag=ACYKJH_000148 DBLQKK010000001.1 Protein Homology CDS 141126 141677 . - 0 ID=cds-HIH2188315.1;Parent=gene-ACYKJH_000148;Dbxref=NCBI_GP:HIH2188315.1;Name=HIH2188315.1;Ontology_term=GO:0047429;gbkey=CDS;gene=maf;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343939.1;locus_tag=ACYKJH_000148;product=septum formation inhibitor Maf;protein_id=HIH2188315.1;transl_table=11 DBLQKK010000001.1 tpg gene 141677 144205 . - . ID=gene-ACYKJH_000149;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=ACYKJH_000149 DBLQKK010000001.1 Protein Homology CDS 141677 144205 . - 0 ID=cds-HIH2188316.1;Parent=gene-ACYKJH_000149;Dbxref=NCBI_GP:HIH2188316.1;Name=HIH2188316.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343938.1;locus_tag=ACYKJH_000149;product=alanine--tRNA ligase;protein_id=HIH2188316.1;transl_table=11 DBLQKK010000001.1 tpg gene 144320 145393 . + . ID=gene-ACYKJH_000150;Name=ACYKJH_000150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000150 DBLQKK010000001.1 Protein Homology CDS 144320 145393 . + 0 ID=cds-HIH2188317.1;Parent=gene-ACYKJH_000150;Dbxref=NCBI_GP:HIH2188317.1;Name=HIH2188317.1;Ontology_term=GO:0008483;gbkey=CDS;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343937.1;locus_tag=ACYKJH_000150;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=HIH2188317.1;transl_table=11 DBLQKK010000001.1 tpg gene 145398 146264 . + . ID=gene-ACYKJH_000151;Name=ACYKJH_000151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000151 DBLQKK010000001.1 Protein Homology CDS 145398 146264 . + 0 ID=cds-HIH2188318.1;Parent=gene-ACYKJH_000151;Dbxref=NCBI_GP:HIH2188318.1;Name=HIH2188318.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343936.1;locus_tag=ACYKJH_000151;product=Gfo/Idh/MocA family protein;protein_id=HIH2188318.1;transl_table=11 DBLQKK010000001.1 tpg gene 146261 147172 . + . ID=gene-ACYKJH_000152;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=ACYKJH_000152 DBLQKK010000001.1 Protein Homology CDS 146261 147172 . + 0 ID=cds-HIH2188319.1;Parent=gene-ACYKJH_000152;Dbxref=NCBI_GP:HIH2188319.1;Name=HIH2188319.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343935.1;locus_tag=ACYKJH_000152;product=ferrochelatase;protein_id=HIH2188319.1;transl_table=11 DBLQKK010000001.1 tpg gene 147232 148467 . - . ID=gene-ACYKJH_000153;Name=ACYKJH_000153;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000153 DBLQKK010000001.1 Protein Homology CDS 147232 148467 . - 0 ID=cds-HIH2188320.1;Parent=gene-ACYKJH_000153;Dbxref=NCBI_GP:HIH2188320.1;Name=HIH2188320.1;Ontology_term=GO:0072488,GO:0008519,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002780812.1;locus_tag=ACYKJH_000153;product=ammonium transporter;protein_id=HIH2188320.1;transl_table=11 ##sequence-region DBLQKK010000002.1 1 110739 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000002.1 tpg region 1 110739 . + . ID=DBLQKK010000002.1:1..110739;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000002.1 tpg gene 1 377 . + . ID=gene-ACYKJH_000154;Name=ACYKJH_000154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000154;partial=true;start_range=.,1 DBLQKK010000002.1 Protein Homology CDS 1 377 . + 2 ID=cds-HIH2188321.1;Parent=gene-ACYKJH_000154;Dbxref=NCBI_GP:HIH2188321.1;Name=HIH2188321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344399.1;locus_tag=ACYKJH_000154;partial=true;product=PepSY-like domain-containing protein;protein_id=HIH2188321.1;start_range=.,1;transl_table=11 DBLQKK010000002.1 tpg gene 386 2002 . - . ID=gene-ACYKJH_000155;Name=ACYKJH_000155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000155 DBLQKK010000002.1 Protein Homology CDS 386 2002 . - 0 ID=cds-HIH2188322.1;Parent=gene-ACYKJH_000155;Dbxref=NCBI_GP:HIH2188322.1;Name=HIH2188322.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344400.1;locus_tag=ACYKJH_000155;product=AAA family ATPase;protein_id=HIH2188322.1;transl_table=11 DBLQKK010000002.1 tpg gene 2006 3256 . - . ID=gene-ACYKJH_000156;Name=mtaB;gbkey=Gene;gene=mtaB;gene_biotype=protein_coding;locus_tag=ACYKJH_000156 DBLQKK010000002.1 Protein Homology CDS 2006 3256 . - 0 ID=cds-HIH2188323.1;Parent=gene-ACYKJH_000156;Dbxref=NCBI_GP:HIH2188323.1;Name=HIH2188323.1;Ontology_term=GO:0006400,GO:0035598,GO:0051539,GO:1904047;gbkey=CDS;gene=mtaB;go_function=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase activity|0035598||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344401.1;locus_tag=ACYKJH_000156;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;protein_id=HIH2188323.1;transl_table=11 DBLQKK010000002.1 tpg gene 3253 4824 . - . ID=gene-ACYKJH_000157;Name=ACYKJH_000157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000157 DBLQKK010000002.1 Protein Homology CDS 3253 4824 . - 0 ID=cds-HIH2188324.1;Parent=gene-ACYKJH_000157;Dbxref=NCBI_GP:HIH2188324.1;Name=HIH2188324.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344402.1;locus_tag=ACYKJH_000157;product=mechanosensitive ion channel domain-containing protein;protein_id=HIH2188324.1;transl_table=11 DBLQKK010000002.1 tpg gene 4821 5876 . - . ID=gene-ACYKJH_000158;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=ACYKJH_000158 DBLQKK010000002.1 Protein Homology CDS 4821 5876 . - 0 ID=cds-HIH2188325.1;Parent=gene-ACYKJH_000158;Dbxref=NCBI_GP:HIH2188325.1;Name=HIH2188325.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344403.1;locus_tag=ACYKJH_000158;product=3-dehydroquinate synthase;protein_id=HIH2188325.1;transl_table=11 DBLQKK010000002.1 tpg gene 5922 7322 . - . ID=gene-ACYKJH_000159;Name=ACYKJH_000159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000159 DBLQKK010000002.1 Protein Homology CDS 5922 7322 . - 0 ID=cds-HIH2188326.1;Parent=gene-ACYKJH_000159;Dbxref=NCBI_GP:HIH2188326.1;Name=HIH2188326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344404.1;locus_tag=ACYKJH_000159;product=COG3400 family protein;protein_id=HIH2188326.1;transl_table=11 DBLQKK010000002.1 tpg gene 7352 8473 . + . ID=gene-ACYKJH_000160;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=ACYKJH_000160 DBLQKK010000002.1 Protein Homology CDS 7352 8473 . + 0 ID=cds-HIH2188327.1;Parent=gene-ACYKJH_000160;Dbxref=NCBI_GP:HIH2188327.1;Name=HIH2188327.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344405.1;locus_tag=ACYKJH_000160;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=HIH2188327.1;transl_table=11 DBLQKK010000002.1 tpg gene 8475 9242 . + . ID=gene-ACYKJH_000161;Name=ACYKJH_000161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000161 DBLQKK010000002.1 Protein Homology CDS 8475 9242 . + 0 ID=cds-HIH2188328.1;Parent=gene-ACYKJH_000161;Dbxref=NCBI_GP:HIH2188328.1;Name=HIH2188328.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344406.1;locus_tag=ACYKJH_000161;product=CorA family divalent cation transporter;protein_id=HIH2188328.1;transl_table=11 DBLQKK010000002.1 tpg gene 9295 9371 . + . ID=gene-ACYKJH_000162;Name=ACYKJH_000162;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_000162 DBLQKK010000002.1 tRNAscan-SE tRNA 9295 9371 . + . ID=rna-ACYKJH_000162;Parent=gene-ACYKJH_000162;anticodon=(pos:9329..9331);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000162;product=tRNA-Arg DBLQKK010000002.1 tRNAscan-SE exon 9295 9371 . + . ID=exon-ACYKJH_000162-1;Parent=rna-ACYKJH_000162;anticodon=(pos:9329..9331);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000162;product=tRNA-Arg DBLQKK010000002.1 tpg gene 9374 9823 . - . ID=gene-ACYKJH_000163;Name=ACYKJH_000163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000163 DBLQKK010000002.1 Protein Homology CDS 9374 9823 . - 0 ID=cds-HIH2188329.1;Parent=gene-ACYKJH_000163;Dbxref=NCBI_GP:HIH2188329.1;Name=HIH2188329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344407.1;locus_tag=ACYKJH_000163;product=hypothetical protein;protein_id=HIH2188329.1;transl_table=11 DBLQKK010000002.1 tpg gene 9839 13084 . - . ID=gene-ACYKJH_000164;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=ACYKJH_000164 DBLQKK010000002.1 Protein Homology CDS 9839 13084 . - 0 ID=cds-HIH2188330.1;Parent=gene-ACYKJH_000164;Dbxref=NCBI_GP:HIH2188330.1;Name=HIH2188330.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344408.1;locus_tag=ACYKJH_000164;product=cytochrome c biogenesis protein CcsA;protein_id=HIH2188330.1;transl_table=11 DBLQKK010000002.1 tpg gene 13102 13797 . - . ID=gene-ACYKJH_000165;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=ACYKJH_000165 DBLQKK010000002.1 Protein Homology CDS 13102 13797 . - 0 ID=cds-HIH2188331.1;Parent=gene-ACYKJH_000165;Dbxref=NCBI_GP:HIH2188331.1;Name=HIH2188331.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=livF;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344409.1;locus_tag=ACYKJH_000165;product=ABC transporter ATP-binding protein;protein_id=HIH2188331.1;transl_table=11 DBLQKK010000002.1 tpg gene 13784 14554 . - . ID=gene-ACYKJH_000166;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=ACYKJH_000166 DBLQKK010000002.1 Protein Homology CDS 13784 14554 . - 0 ID=cds-HIH2188332.1;Parent=gene-ACYKJH_000166;Dbxref=NCBI_GP:HIH2188332.1;Name=HIH2188332.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=livG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344410.1;locus_tag=ACYKJH_000166;product=ABC transporter ATP-binding protein;protein_id=HIH2188332.1;transl_table=11 DBLQKK010000002.1 tpg gene 14551 15603 . - . ID=gene-ACYKJH_000167;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=ACYKJH_000167 DBLQKK010000002.1 Protein Homology CDS 14551 15603 . - 0 ID=cds-HIH2188333.1;Parent=gene-ACYKJH_000167;Dbxref=NCBI_GP:HIH2188333.1;Name=HIH2188333.1;Ontology_term=GO:0015803,GO:0042626,GO:0140359;gbkey=CDS;gene=livM;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344411.1;locus_tag=ACYKJH_000167;product=branched-chain amino acid ABC transporter permease;protein_id=HIH2188333.1;transl_table=11 DBLQKK010000002.1 tpg gene 15603 16499 . - . ID=gene-ACYKJH_000168;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=ACYKJH_000168 DBLQKK010000002.1 Protein Homology CDS 15603 16499 . - 0 ID=cds-HIH2188334.1;Parent=gene-ACYKJH_000168;Dbxref=NCBI_GP:HIH2188334.1;Name=HIH2188334.1;Ontology_term=GO:0015803,GO:0042626,GO:0140359;gbkey=CDS;gene=livH;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344412.1;locus_tag=ACYKJH_000168;product=branched-chain amino acid ABC transporter permease;protein_id=HIH2188334.1;transl_table=11 DBLQKK010000002.1 tpg gene 16518 17633 . - . ID=gene-ACYKJH_000169;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=ACYKJH_000169 DBLQKK010000002.1 Protein Homology CDS 16518 17633 . - 0 ID=cds-HIH2188335.1;Parent=gene-ACYKJH_000169;Dbxref=NCBI_GP:HIH2188335.1;Name=HIH2188335.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344413.1;locus_tag=ACYKJH_000169;product=ABC transporter substrate-binding protein;protein_id=HIH2188335.1;transl_table=11 DBLQKK010000002.1 tpg gene 17655 18770 . - . ID=gene-ACYKJH_000170;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=ACYKJH_000170 DBLQKK010000002.1 Protein Homology CDS 17655 18770 . - 0 ID=cds-HIH2188336.1;Parent=gene-ACYKJH_000170;Dbxref=NCBI_GP:HIH2188336.1;Name=HIH2188336.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344414.1;locus_tag=ACYKJH_000170;product=ABC transporter substrate-binding protein;protein_id=HIH2188336.1;transl_table=11 DBLQKK010000002.1 tpg gene 18801 19235 . - . ID=gene-ACYKJH_000171;Name=ACYKJH_000171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000171 DBLQKK010000002.1 Protein Homology CDS 18801 19235 . - 0 ID=cds-HIH2188337.1;Parent=gene-ACYKJH_000171;Dbxref=NCBI_GP:HIH2188337.1;Name=HIH2188337.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344415.1;locus_tag=ACYKJH_000171;product=c-type cytochrome;protein_id=HIH2188337.1;transl_table=11 DBLQKK010000002.1 tpg gene 19244 19435 . - . ID=gene-ACYKJH_000172;Name=ACYKJH_000172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000172 DBLQKK010000002.1 Protein Homology CDS 19244 19435 . - 0 ID=cds-HIH2188338.1;Parent=gene-ACYKJH_000172;Dbxref=NCBI_GP:HIH2188338.1;Name=HIH2188338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344416.1;locus_tag=ACYKJH_000172;product=mini-MOMP protein;protein_id=HIH2188338.1;transl_table=11 DBLQKK010000002.1 tpg gene 19488 19994 . - . ID=gene-ACYKJH_000173;Name=ACYKJH_000173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000173 DBLQKK010000002.1 Protein Homology CDS 19488 19994 . - 0 ID=cds-HIH2188339.1;Parent=gene-ACYKJH_000173;Dbxref=NCBI_GP:HIH2188339.1;Name=HIH2188339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344417.1;locus_tag=ACYKJH_000173;product=YqhA family protein;protein_id=HIH2188339.1;transl_table=11 DBLQKK010000002.1 tpg gene 20003 21034 . - . ID=gene-ACYKJH_000174;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=ACYKJH_000174 DBLQKK010000002.1 Protein Homology CDS 20003 21034 . - 0 ID=cds-HIH2188340.1;Parent=gene-ACYKJH_000174;Dbxref=NCBI_GP:HIH2188340.1;Name=HIH2188340.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344418.1;locus_tag=ACYKJH_000174;product=aspartate-semialdehyde dehydrogenase;protein_id=HIH2188340.1;transl_table=11 DBLQKK010000002.1 tpg gene 21034 22335 . - . ID=gene-ACYKJH_000175;Name=flgR;gbkey=Gene;gene=flgR;gene_biotype=protein_coding;locus_tag=ACYKJH_000175 DBLQKK010000002.1 Protein Homology CDS 21034 22335 . - 0 ID=cds-HIH2188341.1;Parent=gene-ACYKJH_000175;Dbxref=NCBI_GP:HIH2188341.1;Name=HIH2188341.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677,GO:0005524;gbkey=CDS;gene=flgR;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344419.1;locus_tag=ACYKJH_000175;product=sigma-54-dependent transcriptional regulator;protein_id=HIH2188341.1;transl_table=11 DBLQKK010000002.1 tpg gene 22392 22841 . - . ID=gene-ACYKJH_000176;Name=flgQ;gbkey=Gene;gene=flgQ;gene_biotype=protein_coding;locus_tag=ACYKJH_000176 DBLQKK010000002.1 Protein Homology CDS 22392 22841 . - 0 ID=cds-HIH2188342.1;Parent=gene-ACYKJH_000176;Dbxref=NCBI_GP:HIH2188342.1;Name=HIH2188342.1;gbkey=CDS;gene=flgQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344420.1;locus_tag=ACYKJH_000176;product=flagellar assembly protein FlgQ;protein_id=HIH2188342.1;transl_table=11 DBLQKK010000002.1 tpg gene 22817 23332 . - . ID=gene-ACYKJH_000177;Name=flgP;gbkey=Gene;gene=flgP;gene_biotype=protein_coding;locus_tag=ACYKJH_000177 DBLQKK010000002.1 Protein Homology CDS 22817 23332 . - 0 ID=cds-HIH2188343.1;Parent=gene-ACYKJH_000177;Dbxref=NCBI_GP:HIH2188343.1;Name=HIH2188343.1;gbkey=CDS;gene=flgP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344421.1;locus_tag=ACYKJH_000177;product=flagellar assembly lipoprotein FlgP;protein_id=HIH2188343.1;transl_table=11 DBLQKK010000002.1 tpg gene 23401 25989 . - . ID=gene-ACYKJH_000178;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=ACYKJH_000178 DBLQKK010000002.1 Protein Homology CDS 23401 25989 . - 0 ID=cds-HIH2188344.1;Parent=gene-ACYKJH_000178;Dbxref=NCBI_GP:HIH2188344.1;Name=HIH2188344.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811340.1;locus_tag=ACYKJH_000178;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=HIH2188344.1;transl_table=11 DBLQKK010000002.1 tpg gene 26030 26605 . - . ID=gene-ACYKJH_000179;Name=ACYKJH_000179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000179 DBLQKK010000002.1 Protein Homology CDS 26030 26605 . - 0 ID=cds-HIH2188345.1;Parent=gene-ACYKJH_000179;Dbxref=NCBI_GP:HIH2188345.1;Name=HIH2188345.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344423.1;locus_tag=ACYKJH_000179;product=ComF family protein;protein_id=HIH2188345.1;transl_table=11 DBLQKK010000002.1 tpg gene 26602 27246 . - . ID=gene-ACYKJH_000180;Name=mapA;gbkey=Gene;gene=mapA;gene_biotype=protein_coding;locus_tag=ACYKJH_000180 DBLQKK010000002.1 Protein Homology CDS 26602 27246 . - 0 ID=cds-HIH2188346.1;Parent=gene-ACYKJH_000180;Dbxref=NCBI_GP:HIH2188346.1;Name=HIH2188346.1;gbkey=CDS;gene=mapA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344424.1;locus_tag=ACYKJH_000180;product=outer membrane lipoprotein MapA;protein_id=HIH2188346.1;transl_table=11 DBLQKK010000002.1 tpg gene 27323 29119 . - . ID=gene-ACYKJH_000181;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=ACYKJH_000181 DBLQKK010000002.1 Protein Homology CDS 27323 29119 . - 0 ID=cds-HIH2188347.1;Parent=gene-ACYKJH_000181;Dbxref=NCBI_GP:HIH2188347.1;Name=HIH2188347.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344425.1;locus_tag=ACYKJH_000181;product=translation elongation factor 4;protein_id=HIH2188347.1;transl_table=11 DBLQKK010000002.1 tpg gene 29246 30520 . + . ID=gene-ACYKJH_000182;Name=cmeD;gbkey=Gene;gene=cmeD;gene_biotype=protein_coding;locus_tag=ACYKJH_000182 DBLQKK010000002.1 Protein Homology CDS 29246 30520 . + 0 ID=cds-HIH2188348.1;Parent=gene-ACYKJH_000182;Dbxref=NCBI_GP:HIH2188348.1;Name=HIH2188348.1;gbkey=CDS;gene=cmeD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344426.1;locus_tag=ACYKJH_000182;product=multidrug efflux RND transporter outer membrane subunit CmeD;protein_id=HIH2188348.1;transl_table=11 DBLQKK010000002.1 tpg gene 30517 31257 . + . ID=gene-ACYKJH_000183;Name=cmeE;gbkey=Gene;gene=cmeE;gene_biotype=protein_coding;locus_tag=ACYKJH_000183 DBLQKK010000002.1 Protein Homology CDS 30517 31257 . + 0 ID=cds-HIH2188349.1;Parent=gene-ACYKJH_000183;Dbxref=NCBI_GP:HIH2188349.1;Name=HIH2188349.1;gbkey=CDS;gene=cmeE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344427.1;locus_tag=ACYKJH_000183;product=multidrug efflux RND transporter periplasmic adaptor subunit CmeE;protein_id=HIH2188349.1;transl_table=11 DBLQKK010000002.1 tpg gene 31260 34277 . + . ID=gene-ACYKJH_000184;Name=cmeF;gbkey=Gene;gene=cmeF;gene_biotype=protein_coding;locus_tag=ACYKJH_000184 DBLQKK010000002.1 Protein Homology CDS 31260 34277 . + 0 ID=cds-HIH2188350.1;Parent=gene-ACYKJH_000184;Dbxref=NCBI_GP:HIH2188350.1;Name=HIH2188350.1;gbkey=CDS;gene=cmeF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344428.1;locus_tag=ACYKJH_000184;product=multidrug efflux RND transporter permease subunit CmeF;protein_id=HIH2188350.1;transl_table=11 DBLQKK010000002.1 tpg gene 34301 35107 . - . ID=gene-ACYKJH_000185;Name=ACYKJH_000185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000185 DBLQKK010000002.1 Protein Homology CDS 34301 35107 . - 0 ID=cds-HIH2188351.1;Parent=gene-ACYKJH_000185;Dbxref=NCBI_GP:HIH2188351.1;Name=HIH2188351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344429.1;locus_tag=ACYKJH_000185;product=adenylosuccinate lyase;protein_id=HIH2188351.1;transl_table=11 DBLQKK010000002.1 tpg gene 35108 35827 . - . ID=gene-ACYKJH_000186;Name=ate;gbkey=Gene;gene=ate;gene_biotype=protein_coding;locus_tag=ACYKJH_000186 DBLQKK010000002.1 Protein Homology CDS 35108 35827 . - 0 ID=cds-HIH2188352.1;Parent=gene-ACYKJH_000186;Dbxref=NCBI_GP:HIH2188352.1;Name=HIH2188352.1;gbkey=CDS;gene=ate;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344430.1;locus_tag=ACYKJH_000186;product=arginyltransferase;protein_id=HIH2188352.1;transl_table=11 DBLQKK010000002.1 tpg gene 35827 36078 . - . ID=gene-ACYKJH_000187;Name=ACYKJH_000187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000187 DBLQKK010000002.1 Protein Homology CDS 35827 36078 . - 0 ID=cds-HIH2188353.1;Parent=gene-ACYKJH_000187;Dbxref=NCBI_GP:HIH2188353.1;Name=HIH2188353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344431.1;locus_tag=ACYKJH_000187;product=hypothetical protein;protein_id=HIH2188353.1;transl_table=11 DBLQKK010000002.1 tpg gene 36082 37527 . - . ID=gene-ACYKJH_000188;Name=pycA;gbkey=Gene;gene=pycA;gene_biotype=protein_coding;locus_tag=ACYKJH_000188 DBLQKK010000002.1 Protein Homology CDS 36082 37527 . - 0 ID=cds-HIH2188354.1;Parent=gene-ACYKJH_000188;Dbxref=NCBI_GP:HIH2188354.1;Name=HIH2188354.1;gbkey=CDS;gene=pycA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344432.1;locus_tag=ACYKJH_000188;product=acetyl-CoA carboxylase subunit A;protein_id=HIH2188354.1;transl_table=11 DBLQKK010000002.1 tpg gene 37667 38830 . + . ID=gene-ACYKJH_000189;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=ACYKJH_000189 DBLQKK010000002.1 Protein Homology CDS 37667 38830 . + 0 ID=cds-HIH2188355.1;Parent=gene-ACYKJH_000189;Dbxref=NCBI_GP:HIH2188355.1;Name=HIH2188355.1;Ontology_term=GO:0009252,GO:0051301,GO:0016020;gbkey=CDS;gene=ftsW;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344433.1;locus_tag=ACYKJH_000189;product=putative lipid II flippase FtsW;protein_id=HIH2188355.1;transl_table=11 DBLQKK010000002.1 tpg gene 38827 39855 . + . ID=gene-ACYKJH_000190;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=ACYKJH_000190 DBLQKK010000002.1 Protein Homology CDS 38827 39855 . + 0 ID=cds-HIH2188356.1;Parent=gene-ACYKJH_000190;Dbxref=NCBI_GP:HIH2188356.1;Name=HIH2188356.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344434.1;locus_tag=ACYKJH_000190;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=HIH2188356.1;transl_table=11 DBLQKK010000002.1 tpg gene 39826 40989 . - . ID=gene-ACYKJH_000191;Name=ACYKJH_000191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000191 DBLQKK010000002.1 Protein Homology CDS 39826 40989 . - 0 ID=cds-HIH2188357.1;Parent=gene-ACYKJH_000191;Dbxref=NCBI_GP:HIH2188357.1;Name=HIH2188357.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344435.1;locus_tag=ACYKJH_000191;product=MFS transporter;protein_id=HIH2188357.1;transl_table=11 DBLQKK010000002.1 tpg gene 40997 41848 . - . ID=gene-ACYKJH_000192;Name=ACYKJH_000192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000192 DBLQKK010000002.1 Protein Homology CDS 40997 41848 . - 0 ID=cds-HIH2188358.1;Parent=gene-ACYKJH_000192;Dbxref=NCBI_GP:HIH2188358.1;Name=HIH2188358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344436.1;locus_tag=ACYKJH_000192;product=ATP-binding protein;protein_id=HIH2188358.1;transl_table=11 DBLQKK010000002.1 tpg gene 41911 42801 . - . ID=gene-ACYKJH_000193;Name=ACYKJH_000193;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000193 DBLQKK010000002.1 Protein Homology CDS 41911 42801 . - 0 ID=cds-HIH2188359.1;Parent=gene-ACYKJH_000193;Dbxref=NCBI_GP:HIH2188359.1;Name=HIH2188359.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344437.1;locus_tag=ACYKJH_000193;product=helix-turn-helix domain-containing protein;protein_id=HIH2188359.1;transl_table=11 DBLQKK010000002.1 tpg gene 42798 43403 . - . ID=gene-ACYKJH_000194;Name=ACYKJH_000194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000194 DBLQKK010000002.1 Protein Homology CDS 42798 43403 . - 0 ID=cds-HIH2188360.1;Parent=gene-ACYKJH_000194;Dbxref=NCBI_GP:HIH2188360.1;Name=HIH2188360.1;Ontology_term=GO:0009228,GO:0009229,GO:0000287,GO:0004789;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA,thiamine diphosphate biosynthetic process|0009229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344438.1;locus_tag=ACYKJH_000194;product=thiamine phosphate synthase;protein_id=HIH2188360.1;transl_table=11 DBLQKK010000002.1 tpg gene 43393 44538 . - . ID=gene-ACYKJH_000195;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=ACYKJH_000195 DBLQKK010000002.1 Protein Homology CDS 43393 44538 . - 0 ID=cds-HIH2188361.1;Parent=gene-ACYKJH_000195;Dbxref=NCBI_GP:HIH2188361.1;Name=HIH2188361.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344439.1;locus_tag=ACYKJH_000195;product=2-iminoacetate synthase ThiH;protein_id=HIH2188361.1;transl_table=11 DBLQKK010000002.1 tpg gene 44541 45317 . - . ID=gene-ACYKJH_000196;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=ACYKJH_000196 DBLQKK010000002.1 Protein Homology CDS 44541 45317 . - 0 ID=cds-HIH2188362.1;Parent=gene-ACYKJH_000196;Dbxref=NCBI_GP:HIH2188362.1;Name=HIH2188362.1;Ontology_term=GO:1990107;gbkey=CDS;gene=thiG;go_function=thiazole synthase activity|1990107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344440.1;locus_tag=ACYKJH_000196;product=thiazole synthase;protein_id=HIH2188362.1;transl_table=11 DBLQKK010000002.1 tpg gene 45320 46123 . - . ID=gene-ACYKJH_000197;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=ACYKJH_000197 DBLQKK010000002.1 Protein Homology CDS 45320 46123 . - 0 ID=cds-HIH2188363.1;Parent=gene-ACYKJH_000197;Dbxref=NCBI_GP:HIH2188363.1;Name=HIH2188363.1;Ontology_term=GO:0009228,GO:0016779;gbkey=CDS;gene=thiF;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344441.1;locus_tag=ACYKJH_000197;product=thiamine biosynthesis protein ThiF;protein_id=HIH2188363.1;transl_table=11 DBLQKK010000002.1 tpg gene 46120 46311 . - . ID=gene-ACYKJH_000198;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=ACYKJH_000198 DBLQKK010000002.1 Protein Homology CDS 46120 46311 . - 0 ID=cds-HIH2188364.1;Parent=gene-ACYKJH_000198;Dbxref=NCBI_GP:HIH2188364.1;Name=HIH2188364.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344442.1;locus_tag=ACYKJH_000198;product=sulfur carrier protein ThiS;protein_id=HIH2188364.1;transl_table=11 DBLQKK010000002.1 tpg gene 46549 47541 . - . ID=gene-ACYKJH_000199;Name=ACYKJH_000199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000199 DBLQKK010000002.1 Protein Homology CDS 46549 47541 . - 0 ID=cds-HIH2188365.1;Parent=gene-ACYKJH_000199;Dbxref=NCBI_GP:HIH2188365.1;Name=HIH2188365.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF016232.6;locus_tag=ACYKJH_000199;product=ATP-binding protein;protein_id=HIH2188365.1;transl_table=11 DBLQKK010000002.1 tpg gene 47696 48793 . - . ID=gene-ACYKJH_000200;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=ACYKJH_000200 DBLQKK010000002.1 Protein Homology CDS 47696 48793 . - 0 ID=cds-HIH2188366.1;Parent=gene-ACYKJH_000200;Dbxref=NCBI_GP:HIH2188366.1;Name=HIH2188366.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344443.1;locus_tag=ACYKJH_000200;product=succinyl-diaminopimelate desuccinylase;protein_id=HIH2188366.1;transl_table=11 DBLQKK010000002.1 tpg gene 48797 49396 . - . ID=gene-ACYKJH_000201;Name=ACYKJH_000201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000201 DBLQKK010000002.1 Protein Homology CDS 48797 49396 . - 0 ID=cds-HIH2188367.1;Parent=gene-ACYKJH_000201;Dbxref=NCBI_GP:HIH2188367.1;Name=HIH2188367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344444.1;locus_tag=ACYKJH_000201;product=LysE family translocator;protein_id=HIH2188367.1;transl_table=11 DBLQKK010000002.1 tpg gene 49389 50090 . - . ID=gene-ACYKJH_000202;Name=npdA;gbkey=Gene;gene=npdA;gene_biotype=protein_coding;locus_tag=ACYKJH_000202 DBLQKK010000002.1 Protein Homology CDS 49389 50090 . - 0 ID=cds-HIH2188368.1;Parent=gene-ACYKJH_000202;Dbxref=NCBI_GP:HIH2188368.1;Name=HIH2188368.1;Ontology_term=GO:0008270,GO:0017136,GO:0046872,GO:0070403;gbkey=CDS;gene=npdA;go_function=zinc ion binding|0008270||IEA,histone deacetylase activity%2C NAD-dependent|0017136||IEA,metal ion binding|0046872||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344445.1;locus_tag=ACYKJH_000202;product=SIR2 family NAD-dependent protein deacylase;protein_id=HIH2188368.1;transl_table=11 DBLQKK010000002.1 tpg gene 50133 54077 . - . ID=gene-ACYKJH_000203;Name=ACYKJH_000203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000203 DBLQKK010000002.1 Protein Homology CDS 50133 54077 . - 0 ID=cds-HIH2188369.1;Parent=gene-ACYKJH_000203;Dbxref=NCBI_GP:HIH2188369.1;Name=HIH2188369.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002888298.1;locus_tag=ACYKJH_000203;product=restriction endonuclease subunit S;protein_id=HIH2188369.1;transl_table=11 DBLQKK010000002.1 tpg gene 54086 56293 . - . ID=gene-ACYKJH_000204;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=ACYKJH_000204 DBLQKK010000002.1 Protein Homology CDS 54086 56293 . - 0 ID=cds-HIH2188370.1;Parent=gene-ACYKJH_000204;Dbxref=NCBI_GP:HIH2188370.1;Name=HIH2188370.1;Ontology_term=GO:0006259,GO:0045910,GO:0004519,GO:0016887,GO:0030983;gbkey=CDS;gene=mutS;go_function=endonuclease activity|0004519||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=DNA metabolic process|0006259||IEA,negative regulation of DNA recombination|0045910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002813168.1;locus_tag=ACYKJH_000204;product=endonuclease MutS2;protein_id=HIH2188370.1;transl_table=11 DBLQKK010000002.1 tpg gene 56286 56636 . - . ID=gene-ACYKJH_000205;Name=ACYKJH_000205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000205 DBLQKK010000002.1 Protein Homology CDS 56286 56636 . - 0 ID=cds-HIH2188371.1;Parent=gene-ACYKJH_000205;Dbxref=NCBI_GP:HIH2188371.1;Name=HIH2188371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344448.1;locus_tag=ACYKJH_000205;product=hypothetical protein;protein_id=HIH2188371.1;transl_table=11 DBLQKK010000002.1 tpg gene 56629 57927 . - . ID=gene-ACYKJH_000206;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=ACYKJH_000206 DBLQKK010000002.1 Protein Homology CDS 56629 57927 . - 0 ID=cds-HIH2188372.1;Parent=gene-ACYKJH_000206;Dbxref=NCBI_GP:HIH2188372.1;Name=HIH2188372.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344449.1;locus_tag=ACYKJH_000206;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=HIH2188372.1;transl_table=11 DBLQKK010000002.1 tpg gene 58048 58830 . - . ID=gene-ACYKJH_000207;Name=ACYKJH_000207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000207 DBLQKK010000002.1 Protein Homology CDS 58048 58830 . - 0 ID=cds-HIH2188373.1;Parent=gene-ACYKJH_000207;Dbxref=NCBI_GP:HIH2188373.1;Name=HIH2188373.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002867177.1;locus_tag=ACYKJH_000207;product=carbon-nitrogen hydrolase family protein;protein_id=HIH2188373.1;transl_table=11 DBLQKK010000002.1 tpg gene 58823 58996 . - . ID=gene-ACYKJH_000208;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=ACYKJH_000208 DBLQKK010000002.1 Protein Homology CDS 58823 58996 . - 0 ID=cds-HIH2188374.1;Parent=gene-ACYKJH_000208;Dbxref=NCBI_GP:HIH2188374.1;Name=HIH2188374.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseB;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344452.1;locus_tag=ACYKJH_000208;product=exodeoxyribonuclease VII small subunit;protein_id=HIH2188374.1;transl_table=11 DBLQKK010000002.1 tpg gene 58993 60450 . - . ID=gene-ACYKJH_000209;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=ACYKJH_000209 DBLQKK010000002.1 Protein Homology CDS 58993 60450 . - 0 ID=cds-HIH2188375.1;Parent=gene-ACYKJH_000209;Dbxref=NCBI_GP:HIH2188375.1;Name=HIH2188375.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344453.1;locus_tag=ACYKJH_000209;product=IMP dehydrogenase;protein_id=HIH2188375.1;transl_table=11 DBLQKK010000002.1 tpg gene 60460 61821 . - . ID=gene-ACYKJH_000210;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=ACYKJH_000210 DBLQKK010000002.1 Protein Homology CDS 60460 61821 . - 0 ID=cds-HIH2188376.1;Parent=gene-ACYKJH_000210;Dbxref=NCBI_GP:HIH2188376.1;Name=HIH2188376.1;Ontology_term=GO:0006412,GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344454.1;locus_tag=ACYKJH_000210;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=HIH2188376.1;transl_table=11 DBLQKK010000002.1 tpg gene 61818 61928 . - . ID=gene-ACYKJH_000211;Name=ACYKJH_000211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000211 DBLQKK010000002.1 Protein Homology CDS 61818 61928 . - 0 ID=cds-HIH2188377.1;Parent=gene-ACYKJH_000211;Dbxref=NCBI_GP:HIH2188377.1;Name=HIH2188377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344455.1;locus_tag=ACYKJH_000211;product=hypothetical protein;protein_id=HIH2188377.1;transl_table=11 DBLQKK010000002.1 tpg gene 61922 64675 . - . ID=gene-ACYKJH_000212;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=ACYKJH_000212 DBLQKK010000002.1 Protein Homology CDS 61922 64675 . - 0 ID=cds-HIH2188378.1;Parent=gene-ACYKJH_000212;Dbxref=NCBI_GP:HIH2188378.1;Name=HIH2188378.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344456.1;locus_tag=ACYKJH_000212;product=isoleucine--tRNA ligase;protein_id=HIH2188378.1;transl_table=11 DBLQKK010000002.1 tpg gene 64774 65862 . + . ID=gene-ACYKJH_000213;Name=ACYKJH_000213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000213 DBLQKK010000002.1 Protein Homology CDS 64774 65862 . + 0 ID=cds-HIH2188379.1;Parent=gene-ACYKJH_000213;Dbxref=NCBI_GP:HIH2188379.1;Name=HIH2188379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344457.1;locus_tag=ACYKJH_000213;product=CinA family protein;protein_id=HIH2188379.1;transl_table=11 DBLQKK010000002.1 tpg gene 65874 66299 . + . ID=gene-ACYKJH_000214;Name=ACYKJH_000214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000214 DBLQKK010000002.1 Protein Homology CDS 65874 66299 . + 0 ID=cds-HIH2188380.1;Parent=gene-ACYKJH_000214;Dbxref=NCBI_GP:HIH2188380.1;Name=HIH2188380.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344458.1;locus_tag=ACYKJH_000214;product=GNAT family N-acetyltransferase;protein_id=HIH2188380.1;transl_table=11 DBLQKK010000002.1 tpg pseudogene 66363 66972 . + . ID=gene-ACYKJH_000215;Name=ACYKJH_000215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_000215;pseudo=true DBLQKK010000002.1 Protein Homology CDS 66363 66972 . + 0 ID=cds-ACYKJH_000215;Parent=gene-ACYKJH_000215;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002805019.1;locus_tag=ACYKJH_000215;product=NAD(P)H-dependent oxidoreductase;pseudo=true;transl_table=11 DBLQKK010000002.1 tpg gene 66972 67577 . + . ID=gene-ACYKJH_000216;Name=ACYKJH_000216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000216 DBLQKK010000002.1 Protein Homology CDS 66972 67577 . + 0 ID=cds-HIH2188381.1;Parent=gene-ACYKJH_000216;Dbxref=NCBI_GP:HIH2188381.1;Name=HIH2188381.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344459.1;locus_tag=ACYKJH_000216;product=NAD(P)H-dependent oxidoreductase;protein_id=HIH2188381.1;transl_table=11 DBLQKK010000002.1 tpg gene 67702 68238 . + . ID=gene-ACYKJH_000217;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=ACYKJH_000217 DBLQKK010000002.1 Protein Homology CDS 67702 68238 . + 0 ID=cds-HIH2188382.1;Parent=gene-ACYKJH_000217;Dbxref=NCBI_GP:HIH2188382.1;Name=HIH2188382.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344460.1;locus_tag=ACYKJH_000217;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=HIH2188382.1;transl_table=11 DBLQKK010000002.1 tpg gene 68235 69341 . + . ID=gene-ACYKJH_000218;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=ACYKJH_000218 DBLQKK010000002.1 Protein Homology CDS 68235 69341 . + 0 ID=cds-HIH2188383.1;Parent=gene-ACYKJH_000218;Dbxref=NCBI_GP:HIH2188383.1;Name=HIH2188383.1;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344461.1;locus_tag=ACYKJH_000218;product=RIP metalloprotease RseP;protein_id=HIH2188383.1;transl_table=11 DBLQKK010000002.1 tpg gene 69334 70200 . + . ID=gene-ACYKJH_000219;Name=ACYKJH_000219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000219 DBLQKK010000002.1 Protein Homology CDS 69334 70200 . + 0 ID=cds-HIH2188384.1;Parent=gene-ACYKJH_000219;Dbxref=NCBI_GP:HIH2188384.1;Name=HIH2188384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344462.1;locus_tag=ACYKJH_000219;product=VirK family antimicrobial peptide resistance protein;protein_id=HIH2188384.1;transl_table=11 DBLQKK010000002.1 tpg gene 70287 70664 . + . ID=gene-ACYKJH_000220;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=ACYKJH_000220 DBLQKK010000002.1 Protein Homology CDS 70287 70664 . + 0 ID=cds-HIH2188385.1;Parent=gene-ACYKJH_000220;Dbxref=NCBI_GP:HIH2188385.1;Name=HIH2188385.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344463.1;locus_tag=ACYKJH_000220;product=30S ribosomal protein S6;protein_id=HIH2188385.1;transl_table=11 DBLQKK010000002.1 tpg gene 70673 71224 . + . ID=gene-ACYKJH_000221;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=ACYKJH_000221 DBLQKK010000002.1 Protein Homology CDS 70673 71224 . + 0 ID=cds-HIH2188386.1;Parent=gene-ACYKJH_000221;Dbxref=NCBI_GP:HIH2188386.1;Name=HIH2188386.1;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344464.1;locus_tag=ACYKJH_000221;product=single-stranded DNA-binding protein;protein_id=HIH2188386.1;transl_table=11 DBLQKK010000002.1 tpg gene 71235 71495 . + . ID=gene-ACYKJH_000222;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=ACYKJH_000222 DBLQKK010000002.1 Protein Homology CDS 71235 71495 . + 0 ID=cds-HIH2188387.1;Parent=gene-ACYKJH_000222;Dbxref=NCBI_GP:HIH2188387.1;Name=HIH2188387.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344465.1;locus_tag=ACYKJH_000222;product=30S ribosomal protein S18;protein_id=HIH2188387.1;transl_table=11 DBLQKK010000002.1 tpg gene 71555 73930 . - . ID=gene-ACYKJH_000223;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=ACYKJH_000223 DBLQKK010000002.1 Protein Homology CDS 71555 73930 . - 0 ID=cds-HIH2188388.1;Parent=gene-ACYKJH_000223;Dbxref=NCBI_GP:HIH2188388.1;Name=HIH2188388.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0016887;gbkey=CDS;gene=lon;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344466.1;locus_tag=ACYKJH_000223;product=endopeptidase La;protein_id=HIH2188388.1;transl_table=11 DBLQKK010000002.1 tpg gene 73947 74594 . - . ID=gene-ACYKJH_000224;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=ACYKJH_000224 DBLQKK010000002.1 Protein Homology CDS 73947 74594 . - 0 ID=cds-HIH2188389.1;Parent=gene-ACYKJH_000224;Dbxref=NCBI_GP:HIH2188389.1;Name=HIH2188389.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344467.1;locus_tag=ACYKJH_000224;product=outer membrane protein assembly factor BamD;protein_id=HIH2188389.1;transl_table=11 DBLQKK010000002.1 tpg gene 74755 75144 . + . ID=gene-ACYKJH_000225;Name=fliW;gbkey=Gene;gene=fliW;gene_biotype=protein_coding;locus_tag=ACYKJH_000225 DBLQKK010000002.1 Protein Homology CDS 74755 75144 . + 0 ID=cds-HIH2188390.1;Parent=gene-ACYKJH_000225;Dbxref=NCBI_GP:HIH2188390.1;Name=HIH2188390.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliW;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344468.1;locus_tag=ACYKJH_000225;product=flagellar assembly protein FliW;protein_id=HIH2188390.1;transl_table=11 DBLQKK010000002.1 tpg gene 75144 75875 . + . ID=gene-ACYKJH_000226;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=ACYKJH_000226 DBLQKK010000002.1 Protein Homology CDS 75144 75875 . + 0 ID=cds-HIH2188391.1;Parent=gene-ACYKJH_000226;Dbxref=NCBI_GP:HIH2188391.1;Name=HIH2188391.1;gbkey=CDS;gene=proC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344469.1;locus_tag=ACYKJH_000226;product=pyrroline-5-carboxylate reductase;protein_id=HIH2188391.1;transl_table=11 DBLQKK010000002.1 tpg gene 75872 76174 . + . ID=gene-ACYKJH_000227;Name=ctsT;gbkey=Gene;gene=ctsT;gene_biotype=protein_coding;locus_tag=ACYKJH_000227 DBLQKK010000002.1 GeneMarkS-2+ CDS 75872 76174 . + 0 ID=cds-HIH2188392.1;Parent=gene-ACYKJH_000227;Dbxref=NCBI_GP:HIH2188392.1;Name=HIH2188392.1;gbkey=CDS;gene=ctsT;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_000227;product=type II secretion system protein;protein_id=HIH2188392.1;transl_table=11 DBLQKK010000002.1 tpg gene 76171 76833 . + . ID=gene-ACYKJH_000228;Name=ACYKJH_000228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000228 DBLQKK010000002.1 Protein Homology CDS 76171 76833 . + 0 ID=cds-HIH2188393.1;Parent=gene-ACYKJH_000228;Dbxref=NCBI_GP:HIH2188393.1;Name=HIH2188393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344471.1;locus_tag=ACYKJH_000228;product=hypothetical protein;protein_id=HIH2188393.1;transl_table=11 DBLQKK010000002.1 tpg gene 76830 77282 . + . ID=gene-ACYKJH_000229;Name=ACYKJH_000229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000229 DBLQKK010000002.1 Protein Homology CDS 76830 77282 . + 0 ID=cds-HIH2188394.1;Parent=gene-ACYKJH_000229;Dbxref=NCBI_GP:HIH2188394.1;Name=HIH2188394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344472.1;locus_tag=ACYKJH_000229;product=hypothetical protein;protein_id=HIH2188394.1;transl_table=11 DBLQKK010000002.1 tpg gene 77279 77908 . - . ID=gene-ACYKJH_000230;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=ACYKJH_000230 DBLQKK010000002.1 Protein Homology CDS 77279 77908 . - 0 ID=cds-HIH2188395.1;Parent=gene-ACYKJH_000230;Dbxref=NCBI_GP:HIH2188395.1;Name=HIH2188395.1;gbkey=CDS;gene=hemD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344473.1;locus_tag=ACYKJH_000230;product=uroporphyrinogen-III synthase;protein_id=HIH2188395.1;transl_table=11 DBLQKK010000002.1 tpg gene 77886 78518 . - . ID=gene-ACYKJH_000231;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=ACYKJH_000231 DBLQKK010000002.1 Protein Homology CDS 77886 78518 . - 0 ID=cds-HIH2188396.1;Parent=gene-ACYKJH_000231;Dbxref=NCBI_GP:HIH2188396.1;Name=HIH2188396.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344474.1;locus_tag=ACYKJH_000231;product=thiamine phosphate synthase;protein_id=HIH2188396.1;transl_table=11 DBLQKK010000002.1 tpg gene 78508 79320 . - . ID=gene-ACYKJH_000232;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=ACYKJH_000232 DBLQKK010000002.1 Protein Homology CDS 78508 79320 . - 0 ID=cds-HIH2188397.1;Parent=gene-ACYKJH_000232;Dbxref=NCBI_GP:HIH2188397.1;Name=HIH2188397.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344475.1;locus_tag=ACYKJH_000232;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=HIH2188397.1;transl_table=11 DBLQKK010000002.1 tpg gene 79317 80003 . - . ID=gene-ACYKJH_000233;Name=ACYKJH_000233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000233 DBLQKK010000002.1 Protein Homology CDS 79317 80003 . - 0 ID=cds-HIH2188398.1;Parent=gene-ACYKJH_000233;Dbxref=NCBI_GP:HIH2188398.1;Name=HIH2188398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344476.1;locus_tag=ACYKJH_000233;product=endonuclease III domain-containing protein;protein_id=HIH2188398.1;transl_table=11 DBLQKK010000002.1 tpg gene 80000 80761 . - . ID=gene-ACYKJH_000234;Name=ACYKJH_000234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000234 DBLQKK010000002.1 Protein Homology CDS 80000 80761 . - 0 ID=cds-HIH2188399.1;Parent=gene-ACYKJH_000234;Dbxref=NCBI_GP:HIH2188399.1;Name=HIH2188399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344477.1;locus_tag=ACYKJH_000234;product=ATP-binding protein;protein_id=HIH2188399.1;transl_table=11 DBLQKK010000002.1 tpg gene 80763 83699 . - . ID=gene-ACYKJH_000235;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=ACYKJH_000235 DBLQKK010000002.1 Protein Homology CDS 80763 83699 . - 0 ID=cds-HIH2188400.1;Parent=gene-ACYKJH_000235;Dbxref=NCBI_GP:HIH2188400.1;Name=HIH2188400.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344478.1;locus_tag=ACYKJH_000235;product=DEAD/DEAH box helicase;protein_id=HIH2188400.1;transl_table=11 DBLQKK010000002.1 tpg gene 83699 84094 . - . ID=gene-ACYKJH_000236;Name=ACYKJH_000236;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000236 DBLQKK010000002.1 Protein Homology CDS 83699 84094 . - 0 ID=cds-HIH2188401.1;Parent=gene-ACYKJH_000236;Dbxref=NCBI_GP:HIH2188401.1;Name=HIH2188401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344479.1;locus_tag=ACYKJH_000236;product=bactofilin family protein;protein_id=HIH2188401.1;transl_table=11 DBLQKK010000002.1 tpg gene 84031 84933 . - . ID=gene-ACYKJH_000237;Name=ACYKJH_000237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000237 DBLQKK010000002.1 Protein Homology CDS 84031 84933 . - 0 ID=cds-HIH2188402.1;Parent=gene-ACYKJH_000237;Dbxref=NCBI_GP:HIH2188402.1;Name=HIH2188402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344480.1;locus_tag=ACYKJH_000237;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=HIH2188402.1;transl_table=11 DBLQKK010000002.1 tpg gene 84920 86104 . - . ID=gene-ACYKJH_000238;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=ACYKJH_000238 DBLQKK010000002.1 Protein Homology CDS 84920 86104 . - 0 ID=cds-HIH2188403.1;Parent=gene-ACYKJH_000238;Dbxref=NCBI_GP:HIH2188403.1;Name=HIH2188403.1;Ontology_term=GO:0006730,GO:0004326,GO:0005524,GO:0008841,GO:0046872;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,dihydrofolate synthase activity|0008841||IEA,metal ion binding|0046872||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344481.1;locus_tag=ACYKJH_000238;product=folylpolyglutamate synthase/dihydrofolate synthase family protein;protein_id=HIH2188403.1;transl_table=11 DBLQKK010000002.1 tpg gene 86070 87467 . - . ID=gene-ACYKJH_000239;Name=ACYKJH_000239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000239 DBLQKK010000002.1 Protein Homology CDS 86070 87467 . - 0 ID=cds-HIH2188404.1;Parent=gene-ACYKJH_000239;Dbxref=NCBI_GP:HIH2188404.1;Name=HIH2188404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344482.1;locus_tag=ACYKJH_000239;product=hypothetical protein;protein_id=HIH2188404.1;transl_table=11 DBLQKK010000002.1 tpg gene 87451 87963 . - . ID=gene-ACYKJH_000240;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=ACYKJH_000240 DBLQKK010000002.1 Protein Homology CDS 87451 87963 . - 0 ID=cds-HIH2188405.1;Parent=gene-ACYKJH_000240;Dbxref=NCBI_GP:HIH2188405.1;Name=HIH2188405.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344483.1;locus_tag=ACYKJH_000240;product=LPS assembly lipoprotein LptE;protein_id=HIH2188405.1;transl_table=11 DBLQKK010000002.1 tpg gene 87960 90389 . - . ID=gene-ACYKJH_000241;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=ACYKJH_000241 DBLQKK010000002.1 Protein Homology CDS 87960 90389 . - 0 ID=cds-HIH2188406.1;Parent=gene-ACYKJH_000241;Dbxref=NCBI_GP:HIH2188406.1;Name=HIH2188406.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344484.1;locus_tag=ACYKJH_000241;product=leucine--tRNA ligase;protein_id=HIH2188406.1;transl_table=11 DBLQKK010000002.1 tpg gene 90399 91370 . - . ID=gene-ACYKJH_000242;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=ACYKJH_000242 DBLQKK010000002.1 Protein Homology CDS 90399 91370 . - 0 ID=cds-HIH2188407.1;Parent=gene-ACYKJH_000242;Dbxref=NCBI_GP:HIH2188407.1;Name=HIH2188407.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344485.1;locus_tag=ACYKJH_000242;product=protein translocase subunit SecF;protein_id=HIH2188407.1;transl_table=11 DBLQKK010000002.1 tpg gene 91370 92950 . - . ID=gene-ACYKJH_000243;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=ACYKJH_000243 DBLQKK010000002.1 Protein Homology CDS 91370 92950 . - 0 ID=cds-HIH2188408.1;Parent=gene-ACYKJH_000243;Dbxref=NCBI_GP:HIH2188408.1;Name=HIH2188408.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344486.1;locus_tag=ACYKJH_000243;product=protein translocase subunit SecD;protein_id=HIH2188408.1;transl_table=11 DBLQKK010000002.1 tpg gene 92943 93215 . - . ID=gene-ACYKJH_000244;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=ACYKJH_000244 DBLQKK010000002.1 Protein Homology CDS 92943 93215 . - 0 ID=cds-HIH2188409.1;Parent=gene-ACYKJH_000244;Dbxref=NCBI_GP:HIH2188409.1;Name=HIH2188409.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344487.1;locus_tag=ACYKJH_000244;product=preprotein translocase subunit YajC;protein_id=HIH2188409.1;transl_table=11 DBLQKK010000002.1 tpg gene 93188 94513 . + . ID=gene-ACYKJH_000245;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=ACYKJH_000245 DBLQKK010000002.1 Protein Homology CDS 93188 94513 . + 0 ID=cds-HIH2188410.1;Parent=gene-ACYKJH_000245;Dbxref=NCBI_GP:HIH2188410.1;Name=HIH2188410.1;Ontology_term=GO:0008152,GO:0016410;gbkey=CDS;gene=lnt;go_function=N-acyltransferase activity|0016410||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344488.1;locus_tag=ACYKJH_000245;product=apolipoprotein N-acyltransferase;protein_id=HIH2188410.1;transl_table=11 DBLQKK010000002.1 tpg gene 94750 95946 . - . ID=gene-ACYKJH_000246;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=ACYKJH_000246 DBLQKK010000002.1 Protein Homology CDS 94750 95946 . - 0 ID=cds-HIH2188411.1;Parent=gene-ACYKJH_000246;Dbxref=NCBI_GP:HIH2188411.1;Name=HIH2188411.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344489.1;locus_tag=ACYKJH_000246;product=methionine adenosyltransferase;protein_id=HIH2188411.1;transl_table=11 DBLQKK010000002.1 tpg gene 96086 97309 . + . ID=gene-ACYKJH_000247;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=ACYKJH_000247 DBLQKK010000002.1 Protein Homology CDS 96086 97309 . + 0 ID=cds-HIH2188412.1;Parent=gene-ACYKJH_000247;Dbxref=NCBI_GP:HIH2188412.1;Name=HIH2188412.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344490.1;locus_tag=ACYKJH_000247;product=serine/threonine transporter SstT;protein_id=HIH2188412.1;transl_table=11 DBLQKK010000002.1 tpg gene 97319 98206 . + . ID=gene-ACYKJH_000248;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=ACYKJH_000248 DBLQKK010000002.1 Protein Homology CDS 97319 98206 . + 0 ID=cds-HIH2188413.1;Parent=gene-ACYKJH_000248;Dbxref=NCBI_GP:HIH2188413.1;Name=HIH2188413.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344491.1;locus_tag=ACYKJH_000248;product=aspartate carbamoyltransferase catalytic subunit;protein_id=HIH2188413.1;transl_table=11 DBLQKK010000002.1 tpg gene 98210 99931 . + . ID=gene-ACYKJH_000249;Name=ACYKJH_000249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000249 DBLQKK010000002.1 Protein Homology CDS 98210 99931 . + 0 ID=cds-HIH2188414.1;Parent=gene-ACYKJH_000249;Dbxref=NCBI_GP:HIH2188414.1;Name=HIH2188414.1;Ontology_term=GO:0006508,GO:0004222,GO:0008270;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344492.1;locus_tag=ACYKJH_000249;product=M3 family oligoendopeptidase;protein_id=HIH2188414.1;transl_table=11 DBLQKK010000002.1 tpg gene 99925 100362 . + . ID=gene-ACYKJH_000250;Name=ACYKJH_000250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000250 DBLQKK010000002.1 Protein Homology CDS 99925 100362 . + 0 ID=cds-HIH2188415.1;Parent=gene-ACYKJH_000250;Dbxref=NCBI_GP:HIH2188415.1;Name=HIH2188415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344493.1;locus_tag=ACYKJH_000250;product=hypothetical protein;protein_id=HIH2188415.1;transl_table=11 DBLQKK010000002.1 tpg gene 100359 102434 . + . ID=gene-ACYKJH_000251;Name=ACYKJH_000251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000251 DBLQKK010000002.1 Protein Homology CDS 100359 102434 . + 0 ID=cds-HIH2188416.1;Parent=gene-ACYKJH_000251;Dbxref=NCBI_GP:HIH2188416.1;Name=HIH2188416.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524,GO:0016853,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,isomerase activity|0016853||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344494.1;locus_tag=ACYKJH_000251;product=ATP-dependent helicase;protein_id=HIH2188416.1;transl_table=11 DBLQKK010000002.1 tpg gene 102431 103249 . + . ID=gene-ACYKJH_000252;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=ACYKJH_000252 DBLQKK010000002.1 Protein Homology CDS 102431 103249 . + 0 ID=cds-HIH2188417.1;Parent=gene-ACYKJH_000252;Dbxref=NCBI_GP:HIH2188417.1;Name=HIH2188417.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344495.1;locus_tag=ACYKJH_000252;product=tRNA pseudouridine(55) synthase TruB;protein_id=HIH2188417.1;transl_table=11 DBLQKK010000002.1 tpg gene 103243 103470 . + . ID=gene-ACYKJH_000253;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=ACYKJH_000253 DBLQKK010000002.1 Protein Homology CDS 103243 103470 . + 0 ID=cds-HIH2188418.1;Parent=gene-ACYKJH_000253;Dbxref=NCBI_GP:HIH2188418.1;Name=HIH2188418.1;Ontology_term=GO:0006109,GO:0006402,GO:0003723;gbkey=CDS;gene=csrA;go_function=RNA binding|0003723||IEA;go_process=regulation of carbohydrate metabolic process|0006109||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344496.1;locus_tag=ACYKJH_000253;product=carbon storage regulator CsrA;protein_id=HIH2188418.1;transl_table=11 DBLQKK010000002.1 tpg gene 103467 104234 . + . ID=gene-ACYKJH_000254;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=ACYKJH_000254 DBLQKK010000002.1 Protein Homology CDS 103467 104234 . + 0 ID=cds-HIH2188419.1;Parent=gene-ACYKJH_000254;Dbxref=NCBI_GP:HIH2188419.1;Name=HIH2188419.1;Ontology_term=GO:0016114,GO:0005524,GO:0050515;gbkey=CDS;gene=ispE;go_function=ATP binding|0005524||IEA,4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344497.1;locus_tag=ACYKJH_000254;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=HIH2188419.1;transl_table=11 DBLQKK010000002.1 tpg gene 104231 104683 . + . ID=gene-ACYKJH_000255;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=ACYKJH_000255 DBLQKK010000002.1 Protein Homology CDS 104231 104683 . + 0 ID=cds-HIH2188420.1;Parent=gene-ACYKJH_000255;Dbxref=NCBI_GP:HIH2188420.1;Name=HIH2188420.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344498.1;locus_tag=ACYKJH_000255;product=SsrA-binding protein SmpB;protein_id=HIH2188420.1;transl_table=11 DBLQKK010000002.1 tpg gene 104694 105296 . + . ID=gene-ACYKJH_000256;Name=ACYKJH_000256;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000256 DBLQKK010000002.1 Protein Homology CDS 104694 105296 . + 0 ID=cds-HIH2188421.1;Parent=gene-ACYKJH_000256;Dbxref=NCBI_GP:HIH2188421.1;Name=HIH2188421.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344499.1;locus_tag=ACYKJH_000256;product=TlpA disulfide reductase family protein;protein_id=HIH2188421.1;transl_table=11 DBLQKK010000002.1 tpg gene 105296 105586 . + . ID=gene-ACYKJH_000257;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=ACYKJH_000257 DBLQKK010000002.1 Protein Homology CDS 105296 105586 . + 0 ID=cds-HIH2188422.1;Parent=gene-ACYKJH_000257;Dbxref=NCBI_GP:HIH2188422.1;Name=HIH2188422.1;gbkey=CDS;gene=clpS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344500.1;locus_tag=ACYKJH_000257;product=ATP-dependent Clp protease adaptor ClpS;protein_id=HIH2188422.1;transl_table=11 DBLQKK010000002.1 tpg gene 105583 107712 . + . ID=gene-ACYKJH_000258;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=ACYKJH_000258 DBLQKK010000002.1 Protein Homology CDS 105583 107712 . + 0 ID=cds-HIH2188423.1;Parent=gene-ACYKJH_000258;Dbxref=NCBI_GP:HIH2188423.1;Name=HIH2188423.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344501.1;locus_tag=ACYKJH_000258;product=AAA family ATPase;protein_id=HIH2188423.1;transl_table=11 DBLQKK010000002.1 tpg gene 107687 108334 . + . ID=gene-ACYKJH_000259;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=ACYKJH_000259 DBLQKK010000002.1 Protein Homology CDS 107687 108334 . + 0 ID=cds-HIH2188424.1;Parent=gene-ACYKJH_000259;Dbxref=NCBI_GP:HIH2188424.1;Name=HIH2188424.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344502.1;locus_tag=ACYKJH_000259;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=HIH2188424.1;transl_table=11 DBLQKK010000002.1 tpg gene 108356 109645 . - . ID=gene-ACYKJH_000260;Name=cetZ;gbkey=Gene;gene=cetZ;gene_biotype=protein_coding;locus_tag=ACYKJH_000260 DBLQKK010000002.1 Protein Homology CDS 108356 109645 . - 0 ID=cds-HIH2188425.1;Parent=gene-ACYKJH_000260;Dbxref=NCBI_GP:HIH2188425.1;Name=HIH2188425.1;gbkey=CDS;gene=cetZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344503.1;locus_tag=ACYKJH_000260;product=energy taxis response protein CetZ;protein_id=HIH2188425.1;transl_table=11 DBLQKK010000002.1 tpg gene 109726 110352 . - . ID=gene-ACYKJH_000261;Name=ACYKJH_000261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000261 DBLQKK010000002.1 Protein Homology CDS 109726 110352 . - 0 ID=cds-HIH2188426.1;Parent=gene-ACYKJH_000261;Dbxref=NCBI_GP:HIH2188426.1;Name=HIH2188426.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344504.1;locus_tag=ACYKJH_000261;product=MarC family protein;protein_id=HIH2188426.1;transl_table=11 DBLQKK010000002.1 tpg gene 110367 110726 . - . ID=gene-ACYKJH_000262;Name=ACYKJH_000262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000262 DBLQKK010000002.1 Protein Homology CDS 110367 110726 . - 0 ID=cds-HIH2188427.1;Parent=gene-ACYKJH_000262;Dbxref=NCBI_GP:HIH2188427.1;Name=HIH2188427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344505.1;locus_tag=ACYKJH_000262;product=methionine-R-sulfoxide reductase;protein_id=HIH2188427.1;transl_table=11 ##sequence-region DBLQKK010000003.1 1 108169 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000003.1 tpg region 1 108169 . + . ID=DBLQKK010000003.1:1..108169;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000003.1 tpg gene 383 1447 . + . ID=gene-ACYKJH_000263;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=ACYKJH_000263 DBLQKK010000003.1 Protein Homology CDS 383 1447 . + 0 ID=cds-HIH2188428.1;Parent=gene-ACYKJH_000263;Dbxref=NCBI_GP:HIH2188428.1;Name=HIH2188428.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;gene=xerD;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344270.1;locus_tag=ACYKJH_000263;product=tyrosine-type recombinase/integrase;protein_id=HIH2188428.1;transl_table=11 DBLQKK010000003.1 tpg gene 1437 3221 . + . ID=gene-ACYKJH_000264;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=ACYKJH_000264 DBLQKK010000003.1 Protein Homology CDS 1437 3221 . + 0 ID=cds-HIH2188429.1;Parent=gene-ACYKJH_000264;Dbxref=NCBI_GP:HIH2188429.1;Name=HIH2188429.1;gbkey=CDS;gene=pabB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344269.1;locus_tag=ACYKJH_000264;product=chorismate-binding protein;protein_id=HIH2188429.1;transl_table=11 DBLQKK010000003.1 tpg gene 3218 3784 . + . ID=gene-ACYKJH_000265;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=ACYKJH_000265 DBLQKK010000003.1 Protein Homology CDS 3218 3784 . + 0 ID=cds-HIH2188430.1;Parent=gene-ACYKJH_000265;Dbxref=NCBI_GP:HIH2188430.1;Name=HIH2188430.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=pabA;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344268.1;locus_tag=ACYKJH_000265;product=anthranilate synthase component II;protein_id=HIH2188430.1;transl_table=11 DBLQKK010000003.1 tpg gene 3771 4643 . - . ID=gene-ACYKJH_000266;Name=ACYKJH_000266;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000266 DBLQKK010000003.1 Protein Homology CDS 3771 4643 . - 0 ID=cds-HIH2188431.1;Parent=gene-ACYKJH_000266;Dbxref=NCBI_GP:HIH2188431.1;Name=HIH2188431.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344267.1;locus_tag=ACYKJH_000266;product=DMT family transporter;protein_id=HIH2188431.1;transl_table=11 DBLQKK010000003.1 tpg gene 4738 5166 . + . ID=gene-ACYKJH_000267;Name=fspA1;gbkey=Gene;gene=fspA1;gene_biotype=protein_coding;locus_tag=ACYKJH_000267 DBLQKK010000003.1 Protein Homology CDS 4738 5166 . + 0 ID=cds-HIH2188432.1;Parent=gene-ACYKJH_000267;Dbxref=NCBI_GP:HIH2188432.1;Name=HIH2188432.1;gbkey=CDS;gene=fspA1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344266.1;locus_tag=ACYKJH_000267;product=flagellum-secreted nonflagellar protein FspA1;protein_id=HIH2188432.1;transl_table=11 DBLQKK010000003.1 tpg gene 5232 6488 . + . ID=gene-ACYKJH_000268;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=ACYKJH_000268 DBLQKK010000003.1 Protein Homology CDS 5232 6488 . + 0 ID=cds-HIH2188433.1;Parent=gene-ACYKJH_000268;Dbxref=NCBI_GP:HIH2188433.1;Name=HIH2188433.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344265.1;locus_tag=ACYKJH_000268;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=HIH2188433.1;transl_table=11 DBLQKK010000003.1 tpg gene 6485 7645 . + . ID=gene-ACYKJH_000269;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=ACYKJH_000269 DBLQKK010000003.1 Protein Homology CDS 6485 7645 . + 0 ID=cds-HIH2188434.1;Parent=gene-ACYKJH_000269;Dbxref=NCBI_GP:HIH2188434.1;Name=HIH2188434.1;Ontology_term=GO:0030151,GO:0046872;gbkey=CDS;gene=moeA;go_function=molybdenum ion binding|0030151||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344264.1;locus_tag=ACYKJH_000269;product=molybdopterin molybdotransferase MoeA;protein_id=HIH2188434.1;transl_table=11 DBLQKK010000003.1 tpg gene 7667 8515 . - . ID=gene-ACYKJH_000270;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=ACYKJH_000270 DBLQKK010000003.1 Protein Homology CDS 7667 8515 . - 0 ID=cds-HIH2188435.1;Parent=gene-ACYKJH_000270;Dbxref=NCBI_GP:HIH2188435.1;Name=HIH2188435.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344263.1;locus_tag=ACYKJH_000270;product=signal peptidase I;protein_id=HIH2188435.1;transl_table=11 DBLQKK010000003.1 tpg gene 8525 9373 . - . ID=gene-ACYKJH_000271;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=ACYKJH_000271 DBLQKK010000003.1 Protein Homology CDS 8525 9373 . - 0 ID=cds-HIH2188436.1;Parent=gene-ACYKJH_000271;Dbxref=NCBI_GP:HIH2188436.1;Name=HIH2188436.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344262.1;locus_tag=ACYKJH_000271;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=HIH2188436.1;transl_table=11 DBLQKK010000003.1 tpg gene 9453 9800 . + . ID=gene-ACYKJH_000272;Name=ACYKJH_000272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000272 DBLQKK010000003.1 Protein Homology CDS 9453 9800 . + 0 ID=cds-HIH2188437.1;Parent=gene-ACYKJH_000272;Dbxref=NCBI_GP:HIH2188437.1;Name=HIH2188437.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344261.1;locus_tag=ACYKJH_000272;product=c-type cytochrome;protein_id=HIH2188437.1;transl_table=11 DBLQKK010000003.1 tpg gene 9797 11071 . + . ID=gene-ACYKJH_000273;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=ACYKJH_000273 DBLQKK010000003.1 Protein Homology CDS 9797 11071 . + 0 ID=cds-HIH2188438.1;Parent=gene-ACYKJH_000273;Dbxref=NCBI_GP:HIH2188438.1;Name=HIH2188438.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344260.1;locus_tag=ACYKJH_000273;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=HIH2188438.1;transl_table=11 DBLQKK010000003.1 tpg gene 11068 11397 . + . ID=gene-ACYKJH_000274;Name=ACYKJH_000274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000274 DBLQKK010000003.1 Protein Homology CDS 11068 11397 . + 0 ID=cds-HIH2188439.1;Parent=gene-ACYKJH_000274;Dbxref=NCBI_GP:HIH2188439.1;Name=HIH2188439.1;Ontology_term=GO:1902600,GO:0045259;gbkey=CDS;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344259.1;locus_tag=ACYKJH_000274;product=AtpZ/AtpI family protein;protein_id=HIH2188439.1;transl_table=11 DBLQKK010000003.1 tpg gene 11397 11900 . + . ID=gene-ACYKJH_000275;Name=ACYKJH_000275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000275 DBLQKK010000003.1 Protein Homology CDS 11397 11900 . + 0 ID=cds-HIH2188440.1;Parent=gene-ACYKJH_000275;Dbxref=NCBI_GP:HIH2188440.1;Name=HIH2188440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344258.1;locus_tag=ACYKJH_000275;product=hypothetical protein;protein_id=HIH2188440.1;transl_table=11 DBLQKK010000003.1 tpg gene 11878 13065 . + . ID=gene-ACYKJH_000276;Name=ACYKJH_000276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000276 DBLQKK010000003.1 Protein Homology CDS 11878 13065 . + 0 ID=cds-HIH2188441.1;Parent=gene-ACYKJH_000276;Dbxref=NCBI_GP:HIH2188441.1;Name=HIH2188441.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344257.1;locus_tag=ACYKJH_000276;product=MFS transporter;protein_id=HIH2188441.1;transl_table=11 DBLQKK010000003.1 tpg gene 13058 15154 . + . ID=gene-ACYKJH_000277;Name=ACYKJH_000277;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000277 DBLQKK010000003.1 Protein Homology CDS 13058 15154 . + 0 ID=cds-HIH2188442.1;Parent=gene-ACYKJH_000277;Dbxref=NCBI_GP:HIH2188442.1;Name=HIH2188442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344256.1;locus_tag=ACYKJH_000277;product=flagellar hook-length control protein FliK;protein_id=HIH2188442.1;transl_table=11 DBLQKK010000003.1 tpg gene 15151 15432 . + . ID=gene-ACYKJH_000278;Name=ACYKJH_000278;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000278 DBLQKK010000003.1 Protein Homology CDS 15151 15432 . + 0 ID=cds-HIH2188443.1;Parent=gene-ACYKJH_000278;Dbxref=NCBI_GP:HIH2188443.1;Name=HIH2188443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344255.1;locus_tag=ACYKJH_000278;product=FlhB-like flagellar biosynthesis protein;protein_id=HIH2188443.1;transl_table=11 DBLQKK010000003.1 tpg gene 15429 16229 . - . ID=gene-ACYKJH_000279;Name=psd;gbkey=Gene;gene=psd;gene_biotype=protein_coding;locus_tag=ACYKJH_000279 DBLQKK010000003.1 Protein Homology CDS 15429 16229 . - 0 ID=cds-HIH2188444.1;Parent=gene-ACYKJH_000279;Dbxref=NCBI_GP:HIH2188444.1;Name=HIH2188444.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=psd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344254.1;locus_tag=ACYKJH_000279;product=phosphatidylserine decarboxylase;protein_id=HIH2188444.1;transl_table=11 DBLQKK010000003.1 tpg gene 16226 17350 . - . ID=gene-ACYKJH_000280;Name=ACYKJH_000280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000280 DBLQKK010000003.1 Protein Homology CDS 16226 17350 . - 0 ID=cds-HIH2188445.1;Parent=gene-ACYKJH_000280;Dbxref=NCBI_GP:HIH2188445.1;Name=HIH2188445.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344253.1;locus_tag=ACYKJH_000280;product=metallophosphoesterase;protein_id=HIH2188445.1;transl_table=11 DBLQKK010000003.1 tpg gene 17436 18731 . + . ID=gene-ACYKJH_000281;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=ACYKJH_000281 DBLQKK010000003.1 Protein Homology CDS 17436 18731 . + 0 ID=cds-HIH2188446.1;Parent=gene-ACYKJH_000281;Dbxref=NCBI_GP:HIH2188446.1;Name=HIH2188446.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344252.1;locus_tag=ACYKJH_000281;product=glutamate--tRNA ligase;protein_id=HIH2188446.1;transl_table=11 DBLQKK010000003.1 tpg gene 18734 19015 . + . ID=gene-ACYKJH_000282;Name=ACYKJH_000282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000282 DBLQKK010000003.1 Protein Homology CDS 18734 19015 . + 0 ID=cds-HIH2188447.1;Parent=gene-ACYKJH_000282;Dbxref=NCBI_GP:HIH2188447.1;Name=HIH2188447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344251.1;locus_tag=ACYKJH_000282;product=YggT family protein;protein_id=HIH2188447.1;transl_table=11 DBLQKK010000003.1 tpg gene 19012 20637 . + . ID=gene-ACYKJH_000283;Name=ACYKJH_000283;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000283 DBLQKK010000003.1 Protein Homology CDS 19012 20637 . + 0 ID=cds-HIH2188448.1;Parent=gene-ACYKJH_000283;Dbxref=NCBI_GP:HIH2188448.1;Name=HIH2188448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344250.1;locus_tag=ACYKJH_000283;product=lytic transglycosylase domain-containing protein;protein_id=HIH2188448.1;transl_table=11 DBLQKK010000003.1 tpg gene 20534 21019 . - . ID=gene-ACYKJH_000284;Name=ACYKJH_000284;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000284 DBLQKK010000003.1 Protein Homology CDS 20534 21019 . - 0 ID=cds-HIH2188449.1;Parent=gene-ACYKJH_000284;Dbxref=NCBI_GP:HIH2188449.1;Name=HIH2188449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344249.1;locus_tag=ACYKJH_000284;product=hypothetical protein;protein_id=HIH2188449.1;transl_table=11 DBLQKK010000003.1 tpg gene 21115 21606 . + . ID=gene-ACYKJH_000285;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=ACYKJH_000285 DBLQKK010000003.1 Protein Homology CDS 21115 21606 . + 0 ID=cds-HIH2188450.1;Parent=gene-ACYKJH_000285;Dbxref=NCBI_GP:HIH2188450.1;Name=HIH2188450.1;Ontology_term=GO:0006777,GO:0003824,GO:0005525;gbkey=CDS;gene=mobB;go_function=catalytic activity|0003824||IEA,GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344248.1;locus_tag=ACYKJH_000285;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=HIH2188450.1;transl_table=11 DBLQKK010000003.1 tpg gene 21608 22450 . + . ID=gene-ACYKJH_000286;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=ACYKJH_000286 DBLQKK010000003.1 Protein Homology CDS 21608 22450 . + 0 ID=cds-HIH2188451.1;Parent=gene-ACYKJH_000286;Dbxref=NCBI_GP:HIH2188451.1;Name=HIH2188451.1;gbkey=CDS;gene=fbp;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344247.1;locus_tag=ACYKJH_000286;product=class 1 fructose-bisphosphatase;protein_id=HIH2188451.1;transl_table=11 DBLQKK010000003.1 tpg gene 22443 22640 . + . ID=gene-ACYKJH_000287;Name=ACYKJH_000287;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000287 DBLQKK010000003.1 Protein Homology CDS 22443 22640 . + 0 ID=cds-HIH2188452.1;Parent=gene-ACYKJH_000287;Dbxref=NCBI_GP:HIH2188452.1;Name=HIH2188452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344246.1;locus_tag=ACYKJH_000287;product=hypothetical protein;protein_id=HIH2188452.1;transl_table=11 DBLQKK010000003.1 tpg gene 22650 24536 . + . ID=gene-ACYKJH_000288;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=ACYKJH_000288 DBLQKK010000003.1 Protein Homology CDS 22650 24536 . + 0 ID=cds-HIH2188453.1;Parent=gene-ACYKJH_000288;Dbxref=NCBI_GP:HIH2188453.1;Name=HIH2188453.1;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344245.1;locus_tag=ACYKJH_000288;product=methionine--tRNA ligase;protein_id=HIH2188453.1;transl_table=11 DBLQKK010000003.1 tpg gene 24540 25481 . + . ID=gene-ACYKJH_000289;Name=ACYKJH_000289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000289 DBLQKK010000003.1 Protein Homology CDS 24540 25481 . + 0 ID=cds-HIH2188454.1;Parent=gene-ACYKJH_000289;Dbxref=NCBI_GP:HIH2188454.1;Name=HIH2188454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344244.1;locus_tag=ACYKJH_000289;product=hypothetical protein;protein_id=HIH2188454.1;transl_table=11 DBLQKK010000003.1 tpg gene 25473 25925 . - . ID=gene-ACYKJH_000290;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=ACYKJH_000290 DBLQKK010000003.1 Protein Homology CDS 25473 25925 . - 0 ID=cds-HIH2188455.1;Parent=gene-ACYKJH_000290;Dbxref=NCBI_GP:HIH2188455.1;Name=HIH2188455.1;Ontology_term=GO:0006281,GO:0032259,GO:0003677,GO:0003908,GO:0046872;gbkey=CDS;gene=ogt;go_function=DNA binding|0003677||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344243.1;locus_tag=ACYKJH_000290;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=HIH2188455.1;transl_table=11 DBLQKK010000003.1 tpg gene 25980 28526 . + . ID=gene-ACYKJH_000291;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=ACYKJH_000291 DBLQKK010000003.1 Protein Homology CDS 25980 28526 . + 0 ID=cds-HIH2188456.1;Parent=gene-ACYKJH_000291;Dbxref=NCBI_GP:HIH2188456.1;Name=HIH2188456.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539;gbkey=CDS;gene=acnB;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344242.1;locus_tag=ACYKJH_000291;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=HIH2188456.1;transl_table=11 DBLQKK010000003.1 tpg gene 28586 29824 . + . ID=gene-ACYKJH_000292;Name=ACYKJH_000292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000292 DBLQKK010000003.1 Protein Homology CDS 28586 29824 . + 0 ID=cds-HIH2188457.1;Parent=gene-ACYKJH_000292;Dbxref=NCBI_GP:HIH2188457.1;Name=HIH2188457.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344241.1;locus_tag=ACYKJH_000292;product=ankyrin repeat domain-containing protein;protein_id=HIH2188457.1;transl_table=11 DBLQKK010000003.1 tpg gene 29821 30570 . + . ID=gene-ACYKJH_000293;Name=ACYKJH_000293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000293 DBLQKK010000003.1 Protein Homology CDS 29821 30570 . + 0 ID=cds-HIH2188458.1;Parent=gene-ACYKJH_000293;Dbxref=NCBI_GP:HIH2188458.1;Name=HIH2188458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344240.1;locus_tag=ACYKJH_000293;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=HIH2188458.1;transl_table=11 DBLQKK010000003.1 tpg gene 30567 32300 . + . ID=gene-ACYKJH_000294;Name=ACYKJH_000294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000294 DBLQKK010000003.1 Protein Homology CDS 30567 32300 . + 0 ID=cds-HIH2188459.1;Parent=gene-ACYKJH_000294;Dbxref=NCBI_GP:HIH2188459.1;Name=HIH2188459.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344239.1;locus_tag=ACYKJH_000294;product=Na+/H+ antiporter NhaC family protein;protein_id=HIH2188459.1;transl_table=11 DBLQKK010000003.1 tpg gene 32297 33367 . + . ID=gene-ACYKJH_000295;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=ACYKJH_000295 DBLQKK010000003.1 Protein Homology CDS 32297 33367 . + 0 ID=cds-HIH2188460.1;Parent=gene-ACYKJH_000295;Dbxref=NCBI_GP:HIH2188460.1;Name=HIH2188460.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344238.1;locus_tag=ACYKJH_000295;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=HIH2188460.1;transl_table=11 DBLQKK010000003.1 tpg gene 33354 33770 . - . ID=gene-ACYKJH_000296;Name=ACYKJH_000296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000296 DBLQKK010000003.1 GeneMarkS-2+ CDS 33354 33770 . - 0 ID=cds-HIH2188461.1;Parent=gene-ACYKJH_000296;Dbxref=NCBI_GP:HIH2188461.1;Name=HIH2188461.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_000296;product=copper resistance protein CopD;protein_id=HIH2188461.1;transl_table=11 DBLQKK010000003.1 tpg gene 33889 34302 . + . ID=gene-ACYKJH_000297;Name=ACYKJH_000297;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000297 DBLQKK010000003.1 Protein Homology CDS 33889 34302 . + 0 ID=cds-HIH2188462.1;Parent=gene-ACYKJH_000297;Dbxref=NCBI_GP:HIH2188462.1;Name=HIH2188462.1;Ontology_term=GO:0120225;gbkey=CDS;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344236.1;locus_tag=ACYKJH_000297;product=CoA-binding protein;protein_id=HIH2188462.1;transl_table=11 DBLQKK010000003.1 tpg gene 34302 35513 . + . ID=gene-ACYKJH_000298;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=ACYKJH_000298 DBLQKK010000003.1 Protein Homology CDS 34302 35513 . + 0 ID=cds-HIH2188463.1;Parent=gene-ACYKJH_000298;Dbxref=NCBI_GP:HIH2188463.1;Name=HIH2188463.1;Ontology_term=GO:0006567,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344235.1;locus_tag=ACYKJH_000298;product=threonine ammonia-lyase;protein_id=HIH2188463.1;transl_table=11 DBLQKK010000003.1 tpg gene 35510 36235 . - . ID=gene-ACYKJH_000299;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=ACYKJH_000299 DBLQKK010000003.1 Protein Homology CDS 35510 36235 . - 0 ID=cds-HIH2188464.1;Parent=gene-ACYKJH_000299;Dbxref=NCBI_GP:HIH2188464.1;Name=HIH2188464.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344234.1;locus_tag=ACYKJH_000299;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=HIH2188464.1;transl_table=11 DBLQKK010000003.1 tpg gene 36232 37257 . - . ID=gene-ACYKJH_000300;Name=ACYKJH_000300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000300 DBLQKK010000003.1 Protein Homology CDS 36232 37257 . - 0 ID=cds-HIH2188465.1;Parent=gene-ACYKJH_000300;Dbxref=NCBI_GP:HIH2188465.1;Name=HIH2188465.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344233.1;locus_tag=ACYKJH_000300;product=LptF/LptG family permease;protein_id=HIH2188465.1;transl_table=11 DBLQKK010000003.1 tpg gene 37257 38033 . - . ID=gene-ACYKJH_000301;Name=ACYKJH_000301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000301 DBLQKK010000003.1 Protein Homology CDS 37257 38033 . - 0 ID=cds-HIH2188466.1;Parent=gene-ACYKJH_000301;Dbxref=NCBI_GP:HIH2188466.1;Name=HIH2188466.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344232.1;locus_tag=ACYKJH_000301;product=prepilin peptidase;protein_id=HIH2188466.1;transl_table=11 DBLQKK010000003.1 tpg gene 38030 38698 . - . ID=gene-ACYKJH_000302;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=ACYKJH_000302 DBLQKK010000003.1 Protein Homology CDS 38030 38698 . - 0 ID=cds-HIH2188467.1;Parent=gene-ACYKJH_000302;Dbxref=NCBI_GP:HIH2188467.1;Name=HIH2188467.1;Ontology_term=GO:0009252,GO:0005737;gbkey=CDS;gene=uppS;go_component=cytoplasm|0005737||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344231.1;locus_tag=ACYKJH_000302;product=polyprenyl diphosphate synthase;protein_id=HIH2188467.1;transl_table=11 DBLQKK010000003.1 tpg gene 38702 39319 . - . ID=gene-ACYKJH_000303;Name=ACYKJH_000303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000303 DBLQKK010000003.1 Protein Homology CDS 38702 39319 . - 0 ID=cds-HIH2188468.1;Parent=gene-ACYKJH_000303;Dbxref=NCBI_GP:HIH2188468.1;Name=HIH2188468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344230.1;locus_tag=ACYKJH_000303;product=hypothetical protein;protein_id=HIH2188468.1;transl_table=11 DBLQKK010000003.1 tpg gene 39316 40470 . - . ID=gene-ACYKJH_000304;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=ACYKJH_000304 DBLQKK010000003.1 Protein Homology CDS 39316 40470 . - 0 ID=cds-HIH2188469.1;Parent=gene-ACYKJH_000304;Dbxref=NCBI_GP:HIH2188469.1;Name=HIH2188469.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344229.1;locus_tag=ACYKJH_000304;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=HIH2188469.1;transl_table=11 DBLQKK010000003.1 tpg gene 40467 41756 . - . ID=gene-ACYKJH_000305;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=ACYKJH_000305 DBLQKK010000003.1 Protein Homology CDS 40467 41756 . - 0 ID=cds-HIH2188470.1;Parent=gene-ACYKJH_000305;Dbxref=NCBI_GP:HIH2188470.1;Name=HIH2188470.1;Ontology_term=GO:0006048,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=UDP-N-acetylglucosamine biosynthetic process|0006048||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344228.1;locus_tag=ACYKJH_000305;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=HIH2188470.1;transl_table=11 DBLQKK010000003.1 tpg gene 41899 42633 . + . ID=gene-ACYKJH_000306;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=ACYKJH_000306 DBLQKK010000003.1 Protein Homology CDS 41899 42633 . + 0 ID=cds-HIH2188471.1;Parent=gene-ACYKJH_000306;Dbxref=NCBI_GP:HIH2188471.1;Name=HIH2188471.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344227.1;locus_tag=ACYKJH_000306;product=flagellar type III secretion system pore protein FliP;protein_id=HIH2188471.1;transl_table=11 DBLQKK010000003.1 tpg gene 42649 43419 . - . ID=gene-ACYKJH_000307;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=ACYKJH_000307 DBLQKK010000003.1 Protein Homology CDS 42649 43419 . - 0 ID=cds-HIH2188472.1;Parent=gene-ACYKJH_000307;Dbxref=NCBI_GP:HIH2188472.1;Name=HIH2188472.1;gbkey=CDS;gene=glnH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004315550.1;locus_tag=ACYKJH_000307;product=transporter substrate-binding domain-containing protein;protein_id=HIH2188472.1;transl_table=11 DBLQKK010000003.1 tpg gene 43514 44788 . - . ID=gene-ACYKJH_000308;Name=ACYKJH_000308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000308 DBLQKK010000003.1 Protein Homology CDS 43514 44788 . - 0 ID=cds-HIH2188473.1;Parent=gene-ACYKJH_000308;Dbxref=NCBI_GP:HIH2188473.1;Name=HIH2188473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002776728.1;locus_tag=ACYKJH_000308;product=Cj0814 family flagellar-dependent secreted protein;protein_id=HIH2188473.1;transl_table=11 DBLQKK010000003.1 tpg gene 44878 45597 . - . ID=gene-ACYKJH_000309;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=ACYKJH_000309 DBLQKK010000003.1 Protein Homology CDS 44878 45597 . - 0 ID=cds-HIH2188474.1;Parent=gene-ACYKJH_000309;Dbxref=NCBI_GP:HIH2188474.1;Name=HIH2188474.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344220.1;locus_tag=ACYKJH_000309;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=HIH2188474.1;transl_table=11 DBLQKK010000003.1 tpg gene 45594 47006 . - . ID=gene-ACYKJH_000310;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=ACYKJH_000310 DBLQKK010000003.1 Protein Homology CDS 45594 47006 . - 0 ID=cds-HIH2188475.1;Parent=gene-ACYKJH_000310;Dbxref=NCBI_GP:HIH2188475.1;Name=HIH2188475.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344219.1;locus_tag=ACYKJH_000310;product=threonine synthase;protein_id=HIH2188475.1;transl_table=11 DBLQKK010000003.1 tpg gene 47003 47929 . - . ID=gene-ACYKJH_000311;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=ACYKJH_000311 DBLQKK010000003.1 Protein Homology CDS 47003 47929 . - 0 ID=cds-HIH2188476.1;Parent=gene-ACYKJH_000311;Dbxref=NCBI_GP:HIH2188476.1;Name=HIH2188476.1;Ontology_term=GO:0009245,GO:0005524,GO:0009029;gbkey=CDS;gene=lpxK;go_function=ATP binding|0005524||IEA,tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344218.1;locus_tag=ACYKJH_000311;product=tetraacyldisaccharide 4'-kinase;protein_id=HIH2188476.1;transl_table=11 DBLQKK010000003.1 tpg gene 47933 48673 . - . ID=gene-ACYKJH_000312;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=ACYKJH_000312 DBLQKK010000003.1 Protein Homology CDS 47933 48673 . - 0 ID=cds-HIH2188477.1;Parent=gene-ACYKJH_000312;Dbxref=NCBI_GP:HIH2188477.1;Name=HIH2188477.1;Ontology_term=GO:0009435,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344217.1;locus_tag=ACYKJH_000312;product=NAD+ synthase;protein_id=HIH2188477.1;transl_table=11 DBLQKK010000003.1 tpg gene 48747 49343 . + . ID=gene-ACYKJH_000313;Name=ACYKJH_000313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000313 DBLQKK010000003.1 Protein Homology CDS 48747 49343 . + 0 ID=cds-HIH2188478.1;Parent=gene-ACYKJH_000313;Dbxref=NCBI_GP:HIH2188478.1;Name=HIH2188478.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344216.1;locus_tag=ACYKJH_000313;product=MBL fold metallo-hydrolase;protein_id=HIH2188478.1;transl_table=11 DBLQKK010000003.1 tpg gene 49355 49660 . + . ID=gene-ACYKJH_000314;Name=ACYKJH_000314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000314 DBLQKK010000003.1 Protein Homology CDS 49355 49660 . + 0 ID=cds-HIH2188479.1;Parent=gene-ACYKJH_000314;Dbxref=NCBI_GP:HIH2188479.1;Name=HIH2188479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344215.1;locus_tag=ACYKJH_000314;product=hypothetical protein;protein_id=HIH2188479.1;transl_table=11 DBLQKK010000003.1 tpg gene 49701 50480 . - . ID=gene-ACYKJH_000315;Name=ACYKJH_000315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000315 DBLQKK010000003.1 Protein Homology CDS 49701 50480 . - 0 ID=cds-HIH2188480.1;Parent=gene-ACYKJH_000315;Dbxref=NCBI_GP:HIH2188480.1;Name=HIH2188480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344214.1;locus_tag=ACYKJH_000315;product=enoyl-ACP reductase;protein_id=HIH2188480.1;transl_table=11 DBLQKK010000003.1 tpg gene 50480 51376 . - . ID=gene-ACYKJH_000316;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=ACYKJH_000316 DBLQKK010000003.1 Protein Homology CDS 50480 51376 . - 0 ID=cds-HIH2188481.1;Parent=gene-ACYKJH_000316;Dbxref=NCBI_GP:HIH2188481.1;Name=HIH2188481.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344213.1;locus_tag=ACYKJH_000316;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=HIH2188481.1;transl_table=11 DBLQKK010000003.1 tpg gene 51369 52619 . - . ID=gene-ACYKJH_000317;Name=ACYKJH_000317;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000317 DBLQKK010000003.1 Protein Homology CDS 51369 52619 . - 0 ID=cds-HIH2188482.1;Parent=gene-ACYKJH_000317;Dbxref=NCBI_GP:HIH2188482.1;Name=HIH2188482.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344212.1;locus_tag=ACYKJH_000317;product=M16 family metallopeptidase;protein_id=HIH2188482.1;transl_table=11 DBLQKK010000003.1 tpg gene 52616 53674 . - . ID=gene-ACYKJH_000318;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=ACYKJH_000318 DBLQKK010000003.1 Protein Homology CDS 52616 53674 . - 0 ID=cds-HIH2188483.1;Parent=gene-ACYKJH_000318;Dbxref=NCBI_GP:HIH2188483.1;Name=HIH2188483.1;Ontology_term=GO:0006207,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344211.1;locus_tag=ACYKJH_000318;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=HIH2188483.1;transl_table=11 DBLQKK010000003.1 tpg gene 53706 55448 . - . ID=gene-ACYKJH_000319;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=ACYKJH_000319 DBLQKK010000003.1 Protein Homology CDS 53706 55448 . - 0 ID=cds-HIH2188484.1;Parent=gene-ACYKJH_000319;Dbxref=NCBI_GP:HIH2188484.1;Name=HIH2188484.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;gene=msbA;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344210.1;locus_tag=ACYKJH_000319;product=ABC transporter ATP-binding protein;protein_id=HIH2188484.1;transl_table=11 DBLQKK010000003.1 tpg gene 55441 56829 . - . ID=gene-ACYKJH_000320;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=ACYKJH_000320 DBLQKK010000003.1 Protein Homology CDS 55441 56829 . - 0 ID=cds-HIH2188485.1;Parent=gene-ACYKJH_000320;Dbxref=NCBI_GP:HIH2188485.1;Name=HIH2188485.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344209.1;locus_tag=ACYKJH_000320;product=cysteine--tRNA ligase;protein_id=HIH2188485.1;transl_table=11 DBLQKK010000003.1 tpg gene 56829 58280 . - . ID=gene-ACYKJH_000321;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=ACYKJH_000321 DBLQKK010000003.1 Protein Homology CDS 56829 58280 . - 0 ID=cds-HIH2188486.1;Parent=gene-ACYKJH_000321;Dbxref=NCBI_GP:HIH2188486.1;Name=HIH2188486.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344208.1;locus_tag=ACYKJH_000321;product=murein biosynthesis integral membrane protein MurJ;protein_id=HIH2188486.1;transl_table=11 DBLQKK010000003.1 tpg gene 58384 60243 . + . ID=gene-ACYKJH_000322;Name=ACYKJH_000322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000322 DBLQKK010000003.1 Protein Homology CDS 58384 60243 . + 0 ID=cds-HIH2188487.1;Parent=gene-ACYKJH_000322;Dbxref=NCBI_GP:HIH2188487.1;Name=HIH2188487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344207.1;locus_tag=ACYKJH_000322;product=flagellar assembly protein A;protein_id=HIH2188487.1;transl_table=11 DBLQKK010000003.1 tpg gene 60219 60770 . + . ID=gene-ACYKJH_000323;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=ACYKJH_000323 DBLQKK010000003.1 Protein Homology CDS 60219 60770 . + 0 ID=cds-HIH2188488.1;Parent=gene-ACYKJH_000323;Dbxref=NCBI_GP:HIH2188488.1;Name=HIH2188488.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344206.1;locus_tag=ACYKJH_000323;product=Holliday junction branch migration protein RuvA;protein_id=HIH2188488.1;transl_table=11 DBLQKK010000003.1 tpg gene 60780 61820 . + . ID=gene-ACYKJH_000324;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=ACYKJH_000324 DBLQKK010000003.1 Protein Homology CDS 60780 61820 . + 0 ID=cds-HIH2188489.1;Parent=gene-ACYKJH_000324;Dbxref=NCBI_GP:HIH2188489.1;Name=HIH2188489.1;Ontology_term=GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;gene=ddlA;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344205.1;locus_tag=ACYKJH_000324;product=D-alanine--D-alanine ligase;protein_id=HIH2188489.1;transl_table=11 DBLQKK010000003.1 tpg gene 61880 62095 . + . ID=gene-ACYKJH_000325;Name=ACYKJH_000325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000325 DBLQKK010000003.1 Protein Homology CDS 61880 62095 . + 0 ID=cds-HIH2188490.1;Parent=gene-ACYKJH_000325;Dbxref=NCBI_GP:HIH2188490.1;Name=HIH2188490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344204.1;locus_tag=ACYKJH_000325;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=HIH2188490.1;transl_table=11 DBLQKK010000003.1 tpg gene 62097 62816 . + . ID=gene-ACYKJH_000326;Name=ACYKJH_000326;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000326 DBLQKK010000003.1 Protein Homology CDS 62097 62816 . + 0 ID=cds-HIH2188491.1;Parent=gene-ACYKJH_000326;Dbxref=NCBI_GP:HIH2188491.1;Name=HIH2188491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344203.1;locus_tag=ACYKJH_000326;product=alpha/beta fold hydrolase;protein_id=HIH2188491.1;transl_table=11 DBLQKK010000003.1 tpg gene 62817 64244 . + . ID=gene-ACYKJH_000327;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=ACYKJH_000327 DBLQKK010000003.1 Protein Homology CDS 62817 64244 . + 0 ID=cds-HIH2188492.1;Parent=gene-ACYKJH_000327;Dbxref=NCBI_GP:HIH2188492.1;Name=HIH2188492.1;Ontology_term=GO:0009058,GO:0005524,GO:0016881;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344202.1;locus_tag=ACYKJH_000327;product=Mur ligase family protein;protein_id=HIH2188492.1;transl_table=11 DBLQKK010000003.1 tpg pseudogene 64302 65632 . - . ID=gene-ACYKJH_000328;Name=ACYKJH_000328;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_000328;pseudo=true DBLQKK010000003.1 Protein Homology CDS 64302 65632 . - 0 ID=cds-ACYKJH_000328;Parent=gene-ACYKJH_000328;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002776729.1;locus_tag=ACYKJH_000328;product=Cj0814 family flagellar-dependent secreted protein;pseudo=true;transl_table=11 DBLQKK010000003.1 tpg gene 65731 66750 . - . ID=gene-ACYKJH_000329;Name=flgS;gbkey=Gene;gene=flgS;gene_biotype=protein_coding;locus_tag=ACYKJH_000329 DBLQKK010000003.1 Protein Homology CDS 65731 66750 . - 0 ID=cds-HIH2188493.1;Parent=gene-ACYKJH_000329;Dbxref=NCBI_GP:HIH2188493.1;Name=HIH2188493.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0009927;gbkey=CDS;gene=flgS;go_function=ATP binding|0005524||IEA,histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344200.1;locus_tag=ACYKJH_000329;product=fla regulon two-component system sensor histidine kinase FlgS;protein_id=HIH2188493.1;transl_table=11 DBLQKK010000003.1 tpg gene 66754 67632 . - . ID=gene-ACYKJH_000330;Name=ACYKJH_000330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000330 DBLQKK010000003.1 Protein Homology CDS 66754 67632 . - 0 ID=cds-HIH2188494.1;Parent=gene-ACYKJH_000330;Dbxref=NCBI_GP:HIH2188494.1;Name=HIH2188494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344199.1;locus_tag=ACYKJH_000330;product=DUF234 domain-containing protein;protein_id=HIH2188494.1;transl_table=11 DBLQKK010000003.1 tpg gene 67668 68942 . + . ID=gene-ACYKJH_000331;Name=ACYKJH_000331;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000331 DBLQKK010000003.1 Protein Homology CDS 67668 68942 . + 0 ID=cds-HIH2188495.1;Parent=gene-ACYKJH_000331;Dbxref=NCBI_GP:HIH2188495.1;Name=HIH2188495.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344198.1;locus_tag=ACYKJH_000331;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=HIH2188495.1;transl_table=11 DBLQKK010000003.1 tpg gene 68939 69763 . - . ID=gene-ACYKJH_000332;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=ACYKJH_000332 DBLQKK010000003.1 Protein Homology CDS 68939 69763 . - 0 ID=cds-HIH2188496.1;Parent=gene-ACYKJH_000332;Dbxref=NCBI_GP:HIH2188496.1;Name=HIH2188496.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344197.1;locus_tag=ACYKJH_000332;product=formyltetrahydrofolate deformylase;protein_id=HIH2188496.1;transl_table=11 DBLQKK010000003.1 tpg gene 69760 70878 . - . ID=gene-ACYKJH_000333;Name=cca;gbkey=Gene;gene=cca;gene_biotype=protein_coding;locus_tag=ACYKJH_000333 DBLQKK010000003.1 Protein Homology CDS 69760 70878 . - 0 ID=cds-HIH2188497.1;Parent=gene-ACYKJH_000333;Dbxref=NCBI_GP:HIH2188497.1;Name=HIH2188497.1;gbkey=CDS;gene=cca;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344196.1;locus_tag=ACYKJH_000333;product=CCA tRNA nucleotidyltransferase;protein_id=HIH2188497.1;transl_table=11 DBLQKK010000003.1 tpg gene 70847 71338 . - . ID=gene-ACYKJH_000334;Name=ciaD;gbkey=Gene;gene=ciaD;gene_biotype=protein_coding;locus_tag=ACYKJH_000334 DBLQKK010000003.1 Protein Homology CDS 70847 71338 . - 0 ID=cds-HIH2188498.1;Parent=gene-ACYKJH_000334;Dbxref=NCBI_GP:HIH2188498.1;Name=HIH2188498.1;gbkey=CDS;gene=ciaD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344195.1;locus_tag=ACYKJH_000334;product=effector protein CiaD;protein_id=HIH2188498.1;transl_table=11 DBLQKK010000003.1 tpg gene 71335 71583 . - . ID=gene-ACYKJH_000335;Name=ACYKJH_000335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000335 DBLQKK010000003.1 Protein Homology CDS 71335 71583 . - 0 ID=cds-HIH2188499.1;Parent=gene-ACYKJH_000335;Dbxref=NCBI_GP:HIH2188499.1;Name=HIH2188499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344194.1;locus_tag=ACYKJH_000335;product=tetratricopeptide repeat protein;protein_id=HIH2188499.1;transl_table=11 DBLQKK010000003.1 tpg gene 71662 71835 . - . ID=gene-ACYKJH_000336;Name=tatA2;gbkey=Gene;gene=tatA2;gene_biotype=protein_coding;locus_tag=ACYKJH_000336 DBLQKK010000003.1 Protein Homology CDS 71662 71835 . - 0 ID=cds-HIH2188500.1;Parent=gene-ACYKJH_000336;Dbxref=NCBI_GP:HIH2188500.1;Name=HIH2188500.1;gbkey=CDS;gene=tatA2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344193.1;locus_tag=ACYKJH_000336;product=Sec-independent protein translocase subunit TatA2;protein_id=HIH2188500.1;transl_table=11 DBLQKK010000003.1 tpg gene 71848 72186 . - . ID=gene-ACYKJH_000337;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=ACYKJH_000337 DBLQKK010000003.1 Protein Homology CDS 71848 72186 . - 0 ID=cds-HIH2188501.1;Parent=gene-ACYKJH_000337;Dbxref=NCBI_GP:HIH2188501.1;Name=HIH2188501.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344192.1;locus_tag=ACYKJH_000337;product=chaperone NapD;protein_id=HIH2188501.1;transl_table=11 DBLQKK010000003.1 tpg gene 72179 73093 . - . ID=gene-ACYKJH_000338;Name=napL;gbkey=Gene;gene=napL;gene_biotype=protein_coding;locus_tag=ACYKJH_000338 DBLQKK010000003.1 Protein Homology CDS 72179 73093 . - 0 ID=cds-HIH2188502.1;Parent=gene-ACYKJH_000338;Dbxref=NCBI_GP:HIH2188502.1;Name=HIH2188502.1;gbkey=CDS;gene=napL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344191.1;locus_tag=ACYKJH_000338;product=WD40 repeat domain-containing protein;protein_id=HIH2188502.1;transl_table=11 DBLQKK010000003.1 tpg gene 73098 73622 . - . ID=gene-ACYKJH_000339;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=ACYKJH_000339 DBLQKK010000003.1 Protein Homology CDS 73098 73622 . - 0 ID=cds-HIH2188503.1;Parent=gene-ACYKJH_000339;Dbxref=NCBI_GP:HIH2188503.1;Name=HIH2188503.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344190.1;locus_tag=ACYKJH_000339;product=nitrate reductase cytochrome c-type subunit;protein_id=HIH2188503.1;transl_table=11 DBLQKK010000003.1 tpg gene 73619 74401 . - . ID=gene-ACYKJH_000340;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=ACYKJH_000340 DBLQKK010000003.1 Protein Homology CDS 73619 74401 . - 0 ID=cds-HIH2188504.1;Parent=gene-ACYKJH_000340;Dbxref=NCBI_GP:HIH2188504.1;Name=HIH2188504.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344189.1;locus_tag=ACYKJH_000340;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=HIH2188504.1;transl_table=11 DBLQKK010000003.1 tpg gene 74398 75138 . - . ID=gene-ACYKJH_000341;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=ACYKJH_000341 DBLQKK010000003.1 Protein Homology CDS 74398 75138 . - 0 ID=cds-HIH2188505.1;Parent=gene-ACYKJH_000341;Dbxref=NCBI_GP:HIH2188505.1;Name=HIH2188505.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344188.1;locus_tag=ACYKJH_000341;product=ferredoxin-type protein NapG;protein_id=HIH2188505.1;transl_table=11 DBLQKK010000003.1 tpg gene 75156 77930 . - . ID=gene-ACYKJH_000342;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=ACYKJH_000342 DBLQKK010000003.1 Protein Homology CDS 75156 77930 . - 0 ID=cds-HIH2188506.1;Parent=gene-ACYKJH_000342;Dbxref=NCBI_GP:HIH2188506.1;Name=HIH2188506.1;Ontology_term=GO:0042126,GO:0008940,GO:0030151,GO:0009325;gbkey=CDS;gene=napA;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344187.1;locus_tag=ACYKJH_000342;product=periplasmic nitrate reductase subunit alpha;protein_id=HIH2188506.1;transl_table=11 DBLQKK010000003.1 tpg gene 78177 78704 . - . ID=gene-ACYKJH_000343;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=ACYKJH_000343 DBLQKK010000003.1 Protein Homology CDS 78177 78704 . - 0 ID=cds-HIH2188507.1;Parent=gene-ACYKJH_000343;Dbxref=NCBI_GP:HIH2188507.1;Name=HIH2188507.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344186.1;locus_tag=ACYKJH_000343;product=thiol peroxidase;protein_id=HIH2188507.1;transl_table=11 DBLQKK010000003.1 tpg gene 78803 79543 . - . ID=gene-ACYKJH_000344;Name=peb2;gbkey=Gene;gene=peb2;gene_biotype=protein_coding;locus_tag=ACYKJH_000344 DBLQKK010000003.1 Protein Homology CDS 78803 79543 . - 0 ID=cds-HIH2188508.1;Parent=gene-ACYKJH_000344;Dbxref=NCBI_GP:HIH2188508.1;Name=HIH2188508.1;gbkey=CDS;gene=peb2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344185.1;locus_tag=ACYKJH_000344;product=AcfC family adhesin PEB2;protein_id=HIH2188508.1;transl_table=11 DBLQKK010000003.1 tpg gene 79584 81614 . - . ID=gene-ACYKJH_000345;Name=ACYKJH_000345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000345 DBLQKK010000003.1 Protein Homology CDS 79584 81614 . - 0 ID=cds-HIH2188509.1;Parent=gene-ACYKJH_000345;Dbxref=NCBI_GP:HIH2188509.1;Name=HIH2188509.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524,GO:0016853,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,isomerase activity|0016853||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344184.1;locus_tag=ACYKJH_000345;product=ATP-dependent helicase;protein_id=HIH2188509.1;transl_table=11 DBLQKK010000003.1 tpg gene 81743 82762 . + . ID=gene-ACYKJH_000346;Name=ACYKJH_000346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000346 DBLQKK010000003.1 Protein Homology CDS 81743 82762 . + 0 ID=cds-HIH2188510.1;Parent=gene-ACYKJH_000346;Dbxref=NCBI_GP:HIH2188510.1;Name=HIH2188510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344183.1;locus_tag=ACYKJH_000346;product=hypothetical protein;protein_id=HIH2188510.1;transl_table=11 DBLQKK010000003.1 tpg gene 82785 85397 . + . ID=gene-ACYKJH_000347;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=ACYKJH_000347 DBLQKK010000003.1 Protein Homology CDS 82785 85397 . + 0 ID=cds-HIH2188511.1;Parent=gene-ACYKJH_000347;Dbxref=NCBI_GP:HIH2188511.1;Name=HIH2188511.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;gene=valS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344182.1;locus_tag=ACYKJH_000347;product=valine--tRNA ligase;protein_id=HIH2188511.1;transl_table=11 DBLQKK010000003.1 tpg gene 85402 86412 . + . ID=gene-ACYKJH_000348;Name=ACYKJH_000348;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000348 DBLQKK010000003.1 Protein Homology CDS 85402 86412 . + 0 ID=cds-HIH2188512.1;Parent=gene-ACYKJH_000348;Dbxref=NCBI_GP:HIH2188512.1;Name=HIH2188512.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344181.1;locus_tag=ACYKJH_000348;product=methionine ABC transporter ATP-binding protein;protein_id=HIH2188512.1;transl_table=11 DBLQKK010000003.1 tpg gene 86409 87320 . + . ID=gene-ACYKJH_000349;Name=ACYKJH_000349;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000349 DBLQKK010000003.1 Protein Homology CDS 86409 87320 . + 0 ID=cds-HIH2188513.1;Parent=gene-ACYKJH_000349;Dbxref=NCBI_GP:HIH2188513.1;Name=HIH2188513.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344180.1;locus_tag=ACYKJH_000349;product=methionine ABC transporter permease;protein_id=HIH2188513.1;transl_table=11 DBLQKK010000003.1 tpg gene 87512 88285 . + . ID=gene-ACYKJH_000350;Name=ACYKJH_000350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000350 DBLQKK010000003.1 Protein Homology CDS 87512 88285 . + 0 ID=cds-HIH2188514.1;Parent=gene-ACYKJH_000350;Dbxref=NCBI_GP:HIH2188514.1;Name=HIH2188514.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344179.1;locus_tag=ACYKJH_000350;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=HIH2188514.1;transl_table=11 DBLQKK010000003.1 tpg gene 88334 89104 . + . ID=gene-ACYKJH_000351;Name=ACYKJH_000351;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000351 DBLQKK010000003.1 Protein Homology CDS 88334 89104 . + 0 ID=cds-HIH2188515.1;Parent=gene-ACYKJH_000351;Dbxref=NCBI_GP:HIH2188515.1;Name=HIH2188515.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344178.1;locus_tag=ACYKJH_000351;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=HIH2188515.1;transl_table=11 DBLQKK010000003.1 tpg gene 89114 89890 . + . ID=gene-ACYKJH_000352;Name=ACYKJH_000352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000352 DBLQKK010000003.1 Protein Homology CDS 89114 89890 . + 0 ID=cds-HIH2188516.1;Parent=gene-ACYKJH_000352;Dbxref=NCBI_GP:HIH2188516.1;Name=HIH2188516.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344177.1;locus_tag=ACYKJH_000352;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=HIH2188516.1;transl_table=11 DBLQKK010000003.1 tpg gene 89974 90636 . + . ID=gene-ACYKJH_000353;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=ACYKJH_000353 DBLQKK010000003.1 Protein Homology CDS 89974 90636 . + 0 ID=cds-HIH2188517.1;Parent=gene-ACYKJH_000353;Dbxref=NCBI_GP:HIH2188517.1;Name=HIH2188517.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344176.1;locus_tag=ACYKJH_000353;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=HIH2188517.1;transl_table=11 DBLQKK010000003.1 tpg gene 90633 91196 . + . ID=gene-ACYKJH_000354;Name=ACYKJH_000354;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000354 DBLQKK010000003.1 Protein Homology CDS 90633 91196 . + 0 ID=cds-HIH2188518.1;Parent=gene-ACYKJH_000354;Dbxref=NCBI_GP:HIH2188518.1;Name=HIH2188518.1;Ontology_term=GO:0010181,GO:0016831,GO:0106141;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,flavin prenyltransferase activity|0106141||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344175.1;locus_tag=ACYKJH_000354;product=UbiX family flavin prenyltransferase;protein_id=HIH2188518.1;transl_table=11 DBLQKK010000003.1 tpg gene 91236 91712 . + . ID=gene-ACYKJH_000355;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=ACYKJH_000355 DBLQKK010000003.1 Protein Homology CDS 91236 91712 . + 0 ID=cds-HIH2188519.1;Parent=gene-ACYKJH_000355;Dbxref=NCBI_GP:HIH2188519.1;Name=HIH2188519.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344174.1;locus_tag=ACYKJH_000355;product=pantetheine-phosphate adenylyltransferase;protein_id=HIH2188519.1;transl_table=11 DBLQKK010000003.1 tpg gene 91703 92281 . + . ID=gene-ACYKJH_000356;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=ACYKJH_000356 DBLQKK010000003.1 Protein Homology CDS 91703 92281 . + 0 ID=cds-HIH2188520.1;Parent=gene-ACYKJH_000356;Dbxref=NCBI_GP:HIH2188520.1;Name=HIH2188520.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344173.1;locus_tag=ACYKJH_000356;product=dTMP kinase;protein_id=HIH2188520.1;transl_table=11 DBLQKK010000003.1 tpg gene 92278 93504 . + . ID=gene-ACYKJH_000357;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=ACYKJH_000357 DBLQKK010000003.1 Protein Homology CDS 92278 93504 . + 0 ID=cds-HIH2188521.1;Parent=gene-ACYKJH_000357;Dbxref=NCBI_GP:HIH2188521.1;Name=HIH2188521.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344172.1;locus_tag=ACYKJH_000357;product=histidine--tRNA ligase;protein_id=HIH2188521.1;transl_table=11 DBLQKK010000003.1 tpg gene 93501 95336 . + . ID=gene-ACYKJH_000358;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=ACYKJH_000358 DBLQKK010000003.1 Protein Homology CDS 93501 95336 . + 0 ID=cds-HIH2188522.1;Parent=gene-ACYKJH_000358;Dbxref=NCBI_GP:HIH2188522.1;Name=HIH2188522.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344171.1;locus_tag=ACYKJH_000358;product=biosynthetic arginine decarboxylase;protein_id=HIH2188522.1;transl_table=11 DBLQKK010000003.1 tpg gene 95337 95975 . + . ID=gene-ACYKJH_000359;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=ACYKJH_000359 DBLQKK010000003.1 Protein Homology CDS 95337 95975 . + 0 ID=cds-HIH2188523.1;Parent=gene-ACYKJH_000359;Dbxref=NCBI_GP:HIH2188523.1;Name=HIH2188523.1;Ontology_term=GO:0006535,GO:0009001,GO:0005737;gbkey=CDS;gene=cysE;go_component=cytoplasm|0005737||IEA;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344170.1;locus_tag=ACYKJH_000359;product=serine O-acetyltransferase;protein_id=HIH2188523.1;transl_table=11 DBLQKK010000003.1 tpg gene 96148 97314 . + . ID=gene-ACYKJH_000360;Name=aspB;gbkey=Gene;gene=aspB;gene_biotype=protein_coding;locus_tag=ACYKJH_000360 DBLQKK010000003.1 Protein Homology CDS 96148 97314 . + 0 ID=cds-HIH2188524.1;Parent=gene-ACYKJH_000360;Dbxref=NCBI_GP:HIH2188524.1;Name=HIH2188524.1;Ontology_term=GO:0009058,GO:0008483,GO:0030170;gbkey=CDS;gene=aspB;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004316948.1;locus_tag=ACYKJH_000360;product=pyridoxal phosphate-dependent aminotransferase;protein_id=HIH2188524.1;transl_table=11 DBLQKK010000003.1 tpg gene 97337 97678 . - . ID=gene-ACYKJH_000361;Name=ACYKJH_000361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000361 DBLQKK010000003.1 Protein Homology CDS 97337 97678 . - 0 ID=cds-HIH2188525.1;Parent=gene-ACYKJH_000361;Dbxref=NCBI_GP:HIH2188525.1;Name=HIH2188525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344168.1;locus_tag=ACYKJH_000361;product=cupin domain-containing protein;protein_id=HIH2188525.1;transl_table=11 DBLQKK010000003.1 tpg gene 97748 98770 . - . ID=gene-ACYKJH_000362;Name=ACYKJH_000362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000362 DBLQKK010000003.1 Protein Homology CDS 97748 98770 . - 0 ID=cds-HIH2188526.1;Parent=gene-ACYKJH_000362;Dbxref=NCBI_GP:HIH2188526.1;Name=HIH2188526.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344167.1;locus_tag=ACYKJH_000362;product=MBL fold metallo-hydrolase;protein_id=HIH2188526.1;transl_table=11 DBLQKK010000003.1 tpg pseudogene 98875 98984 . + . ID=gene-ACYKJH_000363;Name=ACYKJH_000363;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_000363;pseudo=true DBLQKK010000003.1 Protein Homology CDS 98875 98984 . + 0 ID=cds-ACYKJH_000363;Parent=gene-ACYKJH_000363;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002780055.1;locus_tag=ACYKJH_000363;product=flagellar basal body-associated FliL family protein;pseudo=true;transl_table=11 DBLQKK010000003.1 tpg gene 99030 100901 . - . ID=gene-ACYKJH_000364;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=ACYKJH_000364 DBLQKK010000003.1 Protein Homology CDS 99030 100901 . - 0 ID=cds-HIH2188527.1;Parent=gene-ACYKJH_000364;Dbxref=NCBI_GP:HIH2188527.1;Name=HIH2188527.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344166.1;locus_tag=ACYKJH_000364;product=molecular chaperone DnaK;protein_id=HIH2188527.1;transl_table=11 DBLQKK010000003.1 tpg gene 100923 101450 . - . ID=gene-ACYKJH_000365;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=ACYKJH_000365 DBLQKK010000003.1 Protein Homology CDS 100923 101450 . - 0 ID=cds-HIH2188528.1;Parent=gene-ACYKJH_000365;Dbxref=NCBI_GP:HIH2188528.1;Name=HIH2188528.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344165.1;locus_tag=ACYKJH_000365;product=nucleotide exchange factor GrpE;protein_id=HIH2188528.1;transl_table=11 DBLQKK010000003.1 tpg gene 101447 102241 . - . ID=gene-ACYKJH_000366;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=ACYKJH_000366 DBLQKK010000003.1 Protein Homology CDS 101447 102241 . - 0 ID=cds-HIH2188529.1;Parent=gene-ACYKJH_000366;Dbxref=NCBI_GP:HIH2188529.1;Name=HIH2188529.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=hrcA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344164.1;locus_tag=ACYKJH_000366;product=HrcA family transcriptional regulator;protein_id=HIH2188529.1;transl_table=11 DBLQKK010000003.1 tpg gene 102542 104632 . - . ID=gene-ACYKJH_000367;Name=cfrA;gbkey=Gene;gene=cfrA;gene_biotype=protein_coding;locus_tag=ACYKJH_000367 DBLQKK010000003.1 Protein Homology CDS 102542 104632 . - 0 ID=cds-HIH2188530.1;Parent=gene-ACYKJH_000367;Dbxref=NCBI_GP:HIH2188530.1;Name=HIH2188530.1;Ontology_term=GO:0044718,GO:0015344;gbkey=CDS;gene=cfrA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA;go_process=siderophore transmembrane transport|0044718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344163.1;locus_tag=ACYKJH_000367;product=TonB-dependent ferric enterobactin receptor CfrA;protein_id=HIH2188530.1;transl_table=11 DBLQKK010000003.1 tpg gene 104957 105640 . + . ID=gene-ACYKJH_000368;Name=ACYKJH_000368;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000368 DBLQKK010000003.1 Protein Homology CDS 104957 105640 . + 0 ID=cds-HIH2188531.1;Parent=gene-ACYKJH_000368;Dbxref=NCBI_GP:HIH2188531.1;Name=HIH2188531.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344162.1;locus_tag=ACYKJH_000368;product=TonB family protein;protein_id=HIH2188531.1;transl_table=11 DBLQKK010000003.1 tpg gene 105732 106286 . - . ID=gene-ACYKJH_000369;Name=ACYKJH_000369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000369 DBLQKK010000003.1 Protein Homology CDS 105732 106286 . - 0 ID=cds-HIH2188532.1;Parent=gene-ACYKJH_000369;Dbxref=NCBI_GP:HIH2188532.1;Name=HIH2188532.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002795935.1;locus_tag=ACYKJH_000369;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=HIH2188532.1;transl_table=11 DBLQKK010000003.1 tpg gene 106291 106554 . - . ID=gene-ACYKJH_000370;Name=ACYKJH_000370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000370 DBLQKK010000003.1 Protein Homology CDS 106291 106554 . - 0 ID=cds-HIH2188533.1;Parent=gene-ACYKJH_000370;Dbxref=NCBI_GP:HIH2188533.1;Name=HIH2188533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002890613.1;locus_tag=ACYKJH_000370;product=transposase;protein_id=HIH2188533.1;transl_table=11 DBLQKK010000003.1 tpg gene 106984 107076 . - . ID=gene-ACYKJH_000371;Name=ACYKJH_000371;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000371 DBLQKK010000003.1 Protein Homology CDS 106984 107076 . - 0 ID=cds-HIH2188534.1;Parent=gene-ACYKJH_000371;Dbxref=NCBI_GP:HIH2188534.1;Name=HIH2188534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344161.1;locus_tag=ACYKJH_000371;product=hypothetical protein;protein_id=HIH2188534.1;transl_table=11 DBLQKK010000003.1 tpg gene 108028 108144 . - . ID=gene-ACYKJH_000372;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=ACYKJH_000372 DBLQKK010000003.1 cmsearch rRNA 108028 108144 . - . ID=rna-ACYKJH_000372;Parent=gene-ACYKJH_000372;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKJH_000372;product=5S ribosomal RNA DBLQKK010000003.1 cmsearch exon 108028 108144 . - . ID=exon-ACYKJH_000372-1;Parent=rna-ACYKJH_000372;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKJH_000372;product=5S ribosomal RNA ##sequence-region DBLQKK010000004.1 1 92996 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000004.1 tpg region 1 92996 . + . ID=DBLQKK010000004.1:1..92996;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000004.1 tpg pseudogene 10 1261 . - . ID=gene-ACYKJH_000373;Name=ACYKJH_000373;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_000373;pseudo=true DBLQKK010000004.1 Protein Homology CDS 10 1261 . - 0 ID=cds-ACYKJH_000373;Parent=gene-ACYKJH_000373;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002822030.1;locus_tag=ACYKJH_000373;product=DUF2920 family protein;pseudo=true;transl_table=11 DBLQKK010000004.1 tpg gene 1261 1776 . - . ID=gene-ACYKJH_000374;Name=ACYKJH_000374;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000374 DBLQKK010000004.1 Protein Homology CDS 1261 1776 . - 0 ID=cds-HIH2188535.1;Parent=gene-ACYKJH_000374;Dbxref=NCBI_GP:HIH2188535.1;Name=HIH2188535.1;Ontology_term=GO:0015628,GO:0005886,GO:0015627;gbkey=CDS;go_component=plasma membrane|0005886||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344731.1;locus_tag=ACYKJH_000374;product=type II secretion system protein;protein_id=HIH2188535.1;transl_table=11 DBLQKK010000004.1 tpg gene 1777 2784 . - . ID=gene-ACYKJH_000375;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=ACYKJH_000375 DBLQKK010000004.1 Protein Homology CDS 1777 2784 . - 0 ID=cds-HIH2188536.1;Parent=gene-ACYKJH_000375;Dbxref=NCBI_GP:HIH2188536.1;Name=HIH2188536.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344732.1;locus_tag=ACYKJH_000375;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=HIH2188536.1;transl_table=11 DBLQKK010000004.1 tpg gene 2781 4175 . - . ID=gene-ACYKJH_000376;Name=ACYKJH_000376;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000376 DBLQKK010000004.1 Protein Homology CDS 2781 4175 . - 0 ID=cds-HIH2188537.1;Parent=gene-ACYKJH_000376;Dbxref=NCBI_GP:HIH2188537.1;Name=HIH2188537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344733.1;locus_tag=ACYKJH_000376;product=M99 family carboxypeptidase catalytic domain-containing protein;protein_id=HIH2188537.1;transl_table=11 DBLQKK010000004.1 tpg gene 4177 5247 . - . ID=gene-ACYKJH_000377;Name=dxr;gbkey=Gene;gene=dxr;gene_biotype=protein_coding;locus_tag=ACYKJH_000377 DBLQKK010000004.1 Protein Homology CDS 4177 5247 . - 0 ID=cds-HIH2188538.1;Parent=gene-ACYKJH_000377;Dbxref=NCBI_GP:HIH2188538.1;Name=HIH2188538.1;Ontology_term=GO:0008299,GO:0019288,GO:0030604,GO:0046872,GO:0005737;gbkey=CDS;gene=dxr;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344734.1;locus_tag=ACYKJH_000377;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=HIH2188538.1;transl_table=11 DBLQKK010000004.1 tpg gene 5244 5969 . - . ID=gene-ACYKJH_000378;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=ACYKJH_000378 DBLQKK010000004.1 Protein Homology CDS 5244 5969 . - 0 ID=cds-HIH2188539.1;Parent=gene-ACYKJH_000378;Dbxref=NCBI_GP:HIH2188539.1;Name=HIH2188539.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;gene=cdsA;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344735.1;locus_tag=ACYKJH_000378;product=phosphatidate cytidylyltransferase;protein_id=HIH2188539.1;transl_table=11 DBLQKK010000004.1 tpg gene 5978 6316 . - . ID=gene-ACYKJH_000379;Name=ACYKJH_000379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000379 DBLQKK010000004.1 Protein Homology CDS 5978 6316 . - 0 ID=cds-HIH2188540.1;Parent=gene-ACYKJH_000379;Dbxref=NCBI_GP:HIH2188540.1;Name=HIH2188540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344736.1;locus_tag=ACYKJH_000379;product=hypothetical protein;protein_id=HIH2188540.1;transl_table=11 DBLQKK010000004.1 tpg gene 6318 7625 . - . ID=gene-ACYKJH_000380;Name=ACYKJH_000380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000380 DBLQKK010000004.1 Protein Homology CDS 6318 7625 . - 0 ID=cds-HIH2188541.1;Parent=gene-ACYKJH_000380;Dbxref=NCBI_GP:HIH2188541.1;Name=HIH2188541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344737.1;locus_tag=ACYKJH_000380;product=NFACT RNA binding domain-containing protein;protein_id=HIH2188541.1;transl_table=11 DBLQKK010000004.1 tpg gene 7687 8262 . + . ID=gene-ACYKJH_000381;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=ACYKJH_000381 DBLQKK010000004.1 Protein Homology CDS 7687 8262 . + 0 ID=cds-HIH2188542.1;Parent=gene-ACYKJH_000381;Dbxref=NCBI_GP:HIH2188542.1;Name=HIH2188542.1;Ontology_term=GO:0005525,GO:0061603;gbkey=CDS;gene=mobA;go_function=GTP binding|0005525||IEA,molybdenum cofactor guanylyltransferase activity|0061603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344738.1;locus_tag=ACYKJH_000381;product=molybdenum cofactor guanylyltransferase;protein_id=HIH2188542.1;transl_table=11 DBLQKK010000004.1 tpg gene 8259 9248 . + . ID=gene-ACYKJH_000382;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=ACYKJH_000382 DBLQKK010000004.1 Protein Homology CDS 8259 9248 . + 0 ID=cds-HIH2188543.1;Parent=gene-ACYKJH_000382;Dbxref=NCBI_GP:HIH2188543.1;Name=HIH2188543.1;Ontology_term=GO:0006629,GO:0004620,GO:0016020;gbkey=CDS;gene=pldA;go_component=membrane|0016020||IEA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344739.1;locus_tag=ACYKJH_000382;product=phospholipase A;protein_id=HIH2188543.1;transl_table=11 DBLQKK010000004.1 tpg gene 9334 10302 . + . ID=gene-ACYKJH_000383;Name=ceuB;gbkey=Gene;gene=ceuB;gene_biotype=protein_coding;locus_tag=ACYKJH_000383 DBLQKK010000004.1 Protein Homology CDS 9334 10302 . + 0 ID=cds-HIH2188544.1;Parent=gene-ACYKJH_000383;Dbxref=NCBI_GP:HIH2188544.1;Name=HIH2188544.1;gbkey=CDS;gene=ceuB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344740.1;locus_tag=ACYKJH_000383;product=enterochelin ABC transporter permease CeuB;protein_id=HIH2188544.1;transl_table=11 DBLQKK010000004.1 tpg gene 10295 11233 . + . ID=gene-ACYKJH_000384;Name=ceuC;gbkey=Gene;gene=ceuC;gene_biotype=protein_coding;locus_tag=ACYKJH_000384 DBLQKK010000004.1 Protein Homology CDS 10295 11233 . + 0 ID=cds-HIH2188545.1;Parent=gene-ACYKJH_000384;Dbxref=NCBI_GP:HIH2188545.1;Name=HIH2188545.1;gbkey=CDS;gene=ceuC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344741.1;locus_tag=ACYKJH_000384;product=enterochelin ABC transporter permease CeuC;protein_id=HIH2188545.1;transl_table=11 DBLQKK010000004.1 tpg gene 11230 11985 . + . ID=gene-ACYKJH_000385;Name=ceuD;gbkey=Gene;gene=ceuD;gene_biotype=protein_coding;locus_tag=ACYKJH_000385 DBLQKK010000004.1 Protein Homology CDS 11230 11985 . + 0 ID=cds-HIH2188546.1;Parent=gene-ACYKJH_000385;Dbxref=NCBI_GP:HIH2188546.1;Name=HIH2188546.1;gbkey=CDS;gene=ceuD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344742.1;locus_tag=ACYKJH_000385;product=enterochelin ABC transporter ATP-binding protein CeuD;protein_id=HIH2188546.1;transl_table=11 DBLQKK010000004.1 tpg gene 11998 12990 . + . ID=gene-ACYKJH_000386;Name=ceuE;gbkey=Gene;gene=ceuE;gene_biotype=protein_coding;locus_tag=ACYKJH_000386 DBLQKK010000004.1 Protein Homology CDS 11998 12990 . + 0 ID=cds-HIH2188547.1;Parent=gene-ACYKJH_000386;Dbxref=NCBI_GP:HIH2188547.1;Name=HIH2188547.1;gbkey=CDS;gene=ceuE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344743.1;locus_tag=ACYKJH_000386;product=enterochelin ABC transporter substrate-binding protein CeuE;protein_id=HIH2188547.1;transl_table=11 DBLQKK010000004.1 tpg gene 13063 13152 . - . ID=gene-ACYKJH_000387;Name=ACYKJH_000387;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_000387 DBLQKK010000004.1 tRNAscan-SE tRNA 13063 13152 . - . ID=rna-ACYKJH_000387;Parent=gene-ACYKJH_000387;anticodon=(pos:complement(13116..13118));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000387;product=tRNA-Ser DBLQKK010000004.1 tRNAscan-SE exon 13063 13152 . - . ID=exon-ACYKJH_000387-1;Parent=rna-ACYKJH_000387;anticodon=(pos:complement(13116..13118));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000387;product=tRNA-Ser DBLQKK010000004.1 tpg gene 13216 13770 . - . ID=gene-ACYKJH_000388;Name=ACYKJH_000388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000388 DBLQKK010000004.1 Protein Homology CDS 13216 13770 . - 0 ID=cds-HIH2188548.1;Parent=gene-ACYKJH_000388;Dbxref=NCBI_GP:HIH2188548.1;Name=HIH2188548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344744.1;locus_tag=ACYKJH_000388;product=hypothetical protein;protein_id=HIH2188548.1;transl_table=11 DBLQKK010000004.1 tpg gene 13906 15738 . - . ID=gene-ACYKJH_000389;Name=ACYKJH_000389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000389 DBLQKK010000004.1 Protein Homology CDS 13906 15738 . - 0 ID=cds-HIH2188549.1;Parent=gene-ACYKJH_000389;Dbxref=NCBI_GP:HIH2188549.1;Name=HIH2188549.1;Ontology_term=GO:0008152,GO:0042279,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_function=nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344745.1;locus_tag=ACYKJH_000389;product=ammonia-forming cytochrome c nitrite reductase subunit c552;protein_id=HIH2188549.1;transl_table=11 DBLQKK010000004.1 tpg gene 15753 16268 . - . ID=gene-ACYKJH_000390;Name=nrfH;gbkey=Gene;gene=nrfH;gene_biotype=protein_coding;locus_tag=ACYKJH_000390 DBLQKK010000004.1 Protein Homology CDS 15753 16268 . - 0 ID=cds-HIH2188550.1;Parent=gene-ACYKJH_000390;Dbxref=NCBI_GP:HIH2188550.1;Name=HIH2188550.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=nrfH;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344746.1;locus_tag=ACYKJH_000390;product=cytochrome c nitrite reductase small subunit;protein_id=HIH2188550.1;transl_table=11 DBLQKK010000004.1 tpg gene 16456 18540 . + . ID=gene-ACYKJH_000391;Name=ACYKJH_000391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000391 DBLQKK010000004.1 Protein Homology CDS 16456 18540 . + 0 ID=cds-HIH2188551.1;Parent=gene-ACYKJH_000391;Dbxref=NCBI_GP:HIH2188551.1;Name=HIH2188551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344747.1;locus_tag=ACYKJH_000391;product=RNA degradosome polyphosphate kinase;protein_id=HIH2188551.1;transl_table=11 DBLQKK010000004.1 tpg gene 18859 19098 . - . ID=gene-ACYKJH_000392;Name=ACYKJH_000392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000392 DBLQKK010000004.1 GeneMarkS-2+ CDS 18859 19098 . - 0 ID=cds-HIH2188552.1;Parent=gene-ACYKJH_000392;Dbxref=NCBI_GP:HIH2188552.1;Name=HIH2188552.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_000392;product=hypothetical protein;protein_id=HIH2188552.1;transl_table=11 DBLQKK010000004.1 tpg gene 19076 19630 . - . ID=gene-ACYKJH_000393;Name=ACYKJH_000393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000393 DBLQKK010000004.1 Protein Homology CDS 19076 19630 . - 0 ID=cds-HIH2188553.1;Parent=gene-ACYKJH_000393;Dbxref=NCBI_GP:HIH2188553.1;Name=HIH2188553.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:TIGR01414.1;locus_tag=ACYKJH_000393;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=HIH2188553.1;transl_table=11 DBLQKK010000004.1 tpg gene 19820 20521 . - . ID=gene-ACYKJH_000394;Name=ACYKJH_000394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000394 DBLQKK010000004.1 Protein Homology CDS 19820 20521 . - 0 ID=cds-HIH2188554.1;Parent=gene-ACYKJH_000394;Dbxref=NCBI_GP:HIH2188554.1;Name=HIH2188554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002902430.1;locus_tag=ACYKJH_000394;product=toxin;protein_id=HIH2188554.1;transl_table=11 DBLQKK010000004.1 tpg gene 20490 20957 . - . ID=gene-ACYKJH_000395;Name=ACYKJH_000395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000395 DBLQKK010000004.1 Protein Homology CDS 20490 20957 . - 0 ID=cds-HIH2188555.1;Parent=gene-ACYKJH_000395;Dbxref=NCBI_GP:HIH2188555.1;Name=HIH2188555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002860417.1;locus_tag=ACYKJH_000395;product=C4-dicarboxylate ABC transporter;protein_id=HIH2188555.1;transl_table=11 DBLQKK010000004.1 tpg gene 21158 21516 . - . ID=gene-ACYKJH_000396;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=ACYKJH_000396 DBLQKK010000004.1 cmsearch tmRNA 21158 21516 . - . ID=rna-ACYKJH_000396;Parent=gene-ACYKJH_000396;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKJH_000396;product=transfer-messenger RNA DBLQKK010000004.1 cmsearch exon 21158 21516 . - . ID=exon-ACYKJH_000396-1;Parent=rna-ACYKJH_000396;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKJH_000396;product=transfer-messenger RNA DBLQKK010000004.1 tpg gene 21517 21927 . - . ID=gene-ACYKJH_000397;Name=ACYKJH_000397;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000397 DBLQKK010000004.1 Protein Homology CDS 21517 21927 . - 0 ID=cds-HIH2188556.1;Parent=gene-ACYKJH_000397;Dbxref=NCBI_GP:HIH2188556.1;Name=HIH2188556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002820028.1;locus_tag=ACYKJH_000397;product=histidine phosphotransferase;protein_id=HIH2188556.1;transl_table=11 DBLQKK010000004.1 tpg gene 22018 23025 . + . ID=gene-ACYKJH_000398;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=ACYKJH_000398 DBLQKK010000004.1 Protein Homology CDS 22018 23025 . + 0 ID=cds-HIH2188557.1;Parent=gene-ACYKJH_000398;Dbxref=NCBI_GP:HIH2188557.1;Name=HIH2188557.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344750.1;locus_tag=ACYKJH_000398;product=Holliday junction branch migration DNA helicase RuvB;protein_id=HIH2188557.1;transl_table=11 DBLQKK010000004.1 tpg gene 23029 24072 . + . ID=gene-ACYKJH_000399;Name=ACYKJH_000399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000399 DBLQKK010000004.1 Protein Homology CDS 23029 24072 . + 0 ID=cds-HIH2188558.1;Parent=gene-ACYKJH_000399;Dbxref=NCBI_GP:HIH2188558.1;Name=HIH2188558.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344751.1;locus_tag=ACYKJH_000399;product=AI-2E family transporter;protein_id=HIH2188558.1;transl_table=11 DBLQKK010000004.1 tpg gene 24102 25493 . - . ID=gene-ACYKJH_000400;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=ACYKJH_000400 DBLQKK010000004.1 Protein Homology CDS 24102 25493 . - 0 ID=cds-HIH2188559.1;Parent=gene-ACYKJH_000400;Dbxref=NCBI_GP:HIH2188559.1;Name=HIH2188559.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344752.1;locus_tag=ACYKJH_000400;product=class II fumarate hydratase;protein_id=HIH2188559.1;transl_table=11 DBLQKK010000004.1 tpg gene 25549 28674 . - . ID=gene-ACYKJH_000401;Name=ACYKJH_000401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000401 DBLQKK010000004.1 Protein Homology CDS 25549 28674 . - 0 ID=cds-HIH2188560.1;Parent=gene-ACYKJH_000401;Dbxref=NCBI_GP:HIH2188560.1;Name=HIH2188560.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344753.1;locus_tag=ACYKJH_000401;product=S8 family serine peptidase;protein_id=HIH2188560.1;transl_table=11 DBLQKK010000004.1 tpg gene 28677 30473 . - . ID=gene-ACYKJH_000402;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=ACYKJH_000402 DBLQKK010000004.1 Protein Homology CDS 28677 30473 . - 0 ID=cds-HIH2188561.1;Parent=gene-ACYKJH_000402;Dbxref=NCBI_GP:HIH2188561.1;Name=HIH2188561.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344754.1;locus_tag=ACYKJH_000402;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=HIH2188561.1;transl_table=11 DBLQKK010000004.1 tpg gene 30478 32826 . - . ID=gene-ACYKJH_000403;Name=ACYKJH_000403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000403 DBLQKK010000004.1 Protein Homology CDS 30478 32826 . - 0 ID=cds-HIH2188562.1;Parent=gene-ACYKJH_000403;Dbxref=NCBI_GP:HIH2188562.1;Name=HIH2188562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344755.1;locus_tag=ACYKJH_000403;product=nucleotidyltransferase;protein_id=HIH2188562.1;transl_table=11 DBLQKK010000004.1 tpg gene 32970 34034 . + . ID=gene-ACYKJH_000404;Name=mqnE;gbkey=Gene;gene=mqnE;gene_biotype=protein_coding;locus_tag=ACYKJH_000404 DBLQKK010000004.1 Protein Homology CDS 32970 34034 . + 0 ID=cds-HIH2188563.1;Parent=gene-ACYKJH_000404;Dbxref=NCBI_GP:HIH2188563.1;Name=HIH2188563.1;Ontology_term=GO:0009234,GO:0016765,GO:0051536;gbkey=CDS;gene=mqnE;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344756.1;locus_tag=ACYKJH_000404;product=aminofutalosine synthase MqnE;protein_id=HIH2188563.1;transl_table=11 DBLQKK010000004.1 tpg gene 34044 35363 . + . ID=gene-ACYKJH_000405;Name=ACYKJH_000405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000405 DBLQKK010000004.1 Protein Homology CDS 34044 35363 . + 0 ID=cds-HIH2188564.1;Parent=gene-ACYKJH_000405;Dbxref=NCBI_GP:HIH2188564.1;Name=HIH2188564.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344757.1;locus_tag=ACYKJH_000405;product=NCS2 family permease;protein_id=HIH2188564.1;transl_table=11 DBLQKK010000004.1 tpg gene 35377 35820 . + . ID=gene-ACYKJH_000406;Name=ACYKJH_000406;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000406 DBLQKK010000004.1 Protein Homology CDS 35377 35820 . + 0 ID=cds-HIH2188565.1;Parent=gene-ACYKJH_000406;Dbxref=NCBI_GP:HIH2188565.1;Name=HIH2188565.1;Ontology_term=GO:0006144,GO:0106130;gbkey=CDS;go_function=purine phosphoribosyltransferase activity|0106130||IEA;go_process=purine nucleobase metabolic process|0006144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344758.1;locus_tag=ACYKJH_000406;product=phosphoribosyltransferase;protein_id=HIH2188565.1;transl_table=11 DBLQKK010000004.1 tpg gene 35865 36563 . + . ID=gene-ACYKJH_000407;Name=ACYKJH_000407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000407 DBLQKK010000004.1 Protein Homology CDS 35865 36563 . + 0 ID=cds-HIH2188566.1;Parent=gene-ACYKJH_000407;Dbxref=NCBI_GP:HIH2188566.1;Name=HIH2188566.1;Ontology_term=GO:0120010,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=intermembrane phospholipid transfer|0120010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344759.1;locus_tag=ACYKJH_000407;product=MlaA family lipoprotein;protein_id=HIH2188566.1;transl_table=11 DBLQKK010000004.1 tpg gene 36573 37142 . + . ID=gene-ACYKJH_000408;Name=ACYKJH_000408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000408 DBLQKK010000004.1 Protein Homology CDS 36573 37142 . + 0 ID=cds-HIH2188567.1;Parent=gene-ACYKJH_000408;Dbxref=NCBI_GP:HIH2188567.1;Name=HIH2188567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344760.1;locus_tag=ACYKJH_000408;product=ABC transporter substrate-binding protein;protein_id=HIH2188567.1;transl_table=11 DBLQKK010000004.1 tpg gene 37142 39607 . + . ID=gene-ACYKJH_000409;Name=ACYKJH_000409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000409 DBLQKK010000004.1 Protein Homology CDS 37142 39607 . + 0 ID=cds-HIH2188568.1;Parent=gene-ACYKJH_000409;Dbxref=NCBI_GP:HIH2188568.1;Name=HIH2188568.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344761.1;locus_tag=ACYKJH_000409;product=efflux RND transporter permease subunit;protein_id=HIH2188568.1;transl_table=11 DBLQKK010000004.1 tpg gene 39638 40240 . - . ID=gene-ACYKJH_000410;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=ACYKJH_000410 DBLQKK010000004.1 Protein Homology CDS 39638 40240 . - 0 ID=cds-HIH2188569.1;Parent=gene-ACYKJH_000410;Dbxref=NCBI_GP:HIH2188569.1;Name=HIH2188569.1;Ontology_term=GO:0006281,GO:0035870,GO:0036222;gbkey=CDS;gene=rdgB;go_function=dITP diphosphatase activity|0035870||IEA,XTP diphosphatase activity|0036222||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344762.1;locus_tag=ACYKJH_000410;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=HIH2188569.1;transl_table=11 DBLQKK010000004.1 tpg gene 40407 41708 . + . ID=gene-ACYKJH_000411;Name=ACYKJH_000411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000411 DBLQKK010000004.1 Protein Homology CDS 40407 41708 . + 0 ID=cds-HIH2188570.1;Parent=gene-ACYKJH_000411;Dbxref=NCBI_GP:HIH2188570.1;Name=HIH2188570.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002870629.1;locus_tag=ACYKJH_000411;product=MFS transporter;protein_id=HIH2188570.1;transl_table=11 DBLQKK010000004.1 tpg gene 41705 43378 . - . ID=gene-ACYKJH_000412;Name=ACYKJH_000412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000412 DBLQKK010000004.1 Protein Homology CDS 41705 43378 . - 0 ID=cds-HIH2188571.1;Parent=gene-ACYKJH_000412;Dbxref=NCBI_GP:HIH2188571.1;Name=HIH2188571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002902449.1;locus_tag=ACYKJH_000412;product=ATP-binding protein;protein_id=HIH2188571.1;transl_table=11 DBLQKK010000004.1 tpg gene 43456 44778 . + . ID=gene-ACYKJH_000413;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=ACYKJH_000413 DBLQKK010000004.1 Protein Homology CDS 43456 44778 . + 0 ID=cds-HIH2188572.1;Parent=gene-ACYKJH_000413;Dbxref=NCBI_GP:HIH2188572.1;Name=HIH2188572.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344766.1;locus_tag=ACYKJH_000413;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=HIH2188572.1;transl_table=11 DBLQKK010000004.1 tpg gene 44775 46580 . + . ID=gene-ACYKJH_000414;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=ACYKJH_000414 DBLQKK010000004.1 Protein Homology CDS 44775 46580 . + 0 ID=cds-HIH2188573.1;Parent=gene-ACYKJH_000414;Dbxref=NCBI_GP:HIH2188573.1;Name=HIH2188573.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344767.1;locus_tag=ACYKJH_000414;product=selenocysteine-specific translation elongation factor;protein_id=HIH2188573.1;transl_table=11 DBLQKK010000004.1 tpg gene 46629 47339 . + . ID=gene-ACYKJH_000415;Name=ACYKJH_000415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000415 DBLQKK010000004.1 Protein Homology CDS 46629 47339 . + 0 ID=cds-HIH2188574.1;Parent=gene-ACYKJH_000415;Dbxref=NCBI_GP:HIH2188574.1;Name=HIH2188574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344768.1;locus_tag=ACYKJH_000415;product=thioredoxin fold domain-containing protein;protein_id=HIH2188574.1;transl_table=11 DBLQKK010000004.1 tpg gene 47345 47875 . + . ID=gene-ACYKJH_000416;Name=ACYKJH_000416;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000416 DBLQKK010000004.1 Protein Homology CDS 47345 47875 . + 0 ID=cds-HIH2188575.1;Parent=gene-ACYKJH_000416;Dbxref=NCBI_GP:HIH2188575.1;Name=HIH2188575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344769.1;locus_tag=ACYKJH_000416;product=hypothetical protein;protein_id=HIH2188575.1;transl_table=11 DBLQKK010000004.1 tpg gene 47920 48411 . - . ID=gene-ACYKJH_000417;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=ACYKJH_000417 DBLQKK010000004.1 Protein Homology CDS 47920 48411 . - 0 ID=cds-HIH2188576.1;Parent=gene-ACYKJH_000417;Dbxref=NCBI_GP:HIH2188576.1;Name=HIH2188576.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344770.1;locus_tag=ACYKJH_000417;product=flavodoxin FldA;protein_id=HIH2188576.1;transl_table=11 DBLQKK010000004.1 tpg gene 48411 49106 . - . ID=gene-ACYKJH_000418;Name=ACYKJH_000418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000418 DBLQKK010000004.1 Protein Homology CDS 48411 49106 . - 0 ID=cds-HIH2188577.1;Parent=gene-ACYKJH_000418;Dbxref=NCBI_GP:HIH2188577.1;Name=HIH2188577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344771.1;locus_tag=ACYKJH_000418;product=hypothetical protein;protein_id=HIH2188577.1;transl_table=11 DBLQKK010000004.1 tpg gene 49109 49423 . - . ID=gene-ACYKJH_000419;Name=ACYKJH_000419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000419 DBLQKK010000004.1 Protein Homology CDS 49109 49423 . - 0 ID=cds-HIH2188578.1;Parent=gene-ACYKJH_000419;Dbxref=NCBI_GP:HIH2188578.1;Name=HIH2188578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344772.1;locus_tag=ACYKJH_000419;product=DUF2325 domain-containing protein;protein_id=HIH2188578.1;transl_table=11 DBLQKK010000004.1 tpg gene 49595 51019 . + . ID=gene-ACYKJH_000420;Name=katA;gbkey=Gene;gene=katA;gene_biotype=protein_coding;locus_tag=ACYKJH_000420 DBLQKK010000004.1 Protein Homology CDS 49595 51019 . + 0 ID=cds-HIH2188579.1;Parent=gene-ACYKJH_000420;Dbxref=NCBI_GP:HIH2188579.1;Name=HIH2188579.1;Ontology_term=GO:0004096,GO:0020037,GO:0046872;gbkey=CDS;gene=katA;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344773.1;locus_tag=ACYKJH_000420;product=catalase;protein_id=HIH2188579.1;transl_table=11 DBLQKK010000004.1 tpg gene 51076 51546 . + . ID=gene-ACYKJH_000421;Name=ACYKJH_000421;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000421 DBLQKK010000004.1 Protein Homology CDS 51076 51546 . + 0 ID=cds-HIH2188580.1;Parent=gene-ACYKJH_000421;Dbxref=NCBI_GP:HIH2188580.1;Name=HIH2188580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344774.1;locus_tag=ACYKJH_000421;product=Cj1386 family hemin-binding protein;protein_id=HIH2188580.1;transl_table=11 DBLQKK010000004.1 tpg gene 51547 52203 . - . ID=gene-ACYKJH_000422;Name=ACYKJH_000422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000422 DBLQKK010000004.1 Protein Homology CDS 51547 52203 . - 0 ID=cds-HIH2188581.1;Parent=gene-ACYKJH_000422;Dbxref=NCBI_GP:HIH2188581.1;Name=HIH2188581.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344775.1;locus_tag=ACYKJH_000422;product=helix-turn-helix transcriptional regulator;protein_id=HIH2188581.1;transl_table=11 DBLQKK010000004.1 tpg gene 52371 52733 . + . ID=gene-ACYKJH_000423;Name=ACYKJH_000423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000423 DBLQKK010000004.1 Protein Homology CDS 52371 52733 . + 0 ID=cds-HIH2188582.1;Parent=gene-ACYKJH_000423;Dbxref=NCBI_GP:HIH2188582.1;Name=HIH2188582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344776.1;locus_tag=ACYKJH_000423;product=RidA family protein;protein_id=HIH2188582.1;transl_table=11 DBLQKK010000004.1 tpg pseudogene 52737 53129 . + . ID=gene-ACYKJH_000424;Name=ACYKJH_000424;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_000424;pseudo=true DBLQKK010000004.1 Protein Homology CDS 52737 53129 . + 0 ID=cds-ACYKJH_000424;Parent=gene-ACYKJH_000424;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020247107.1;locus_tag=ACYKJH_000424;product=C4-dicarboxylate transporter DcuC;pseudo=true;transl_table=11 DBLQKK010000004.1 tpg gene 53201 53575 . + . ID=gene-ACYKJH_000425;Name=ACYKJH_000425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000425 DBLQKK010000004.1 Protein Homology CDS 53201 53575 . + 0 ID=cds-HIH2188583.1;Parent=gene-ACYKJH_000425;Dbxref=NCBI_GP:HIH2188583.1;Name=HIH2188583.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025561.6;locus_tag=ACYKJH_000425;product=TnpV protein;protein_id=HIH2188583.1;transl_table=11 DBLQKK010000004.1 tpg gene 53942 55861 . + . ID=gene-ACYKJH_000426;Name=tet(O);gbkey=Gene;gene=tet(O);gene_biotype=protein_coding;locus_tag=ACYKJH_000426 DBLQKK010000004.1 Protein Homology CDS 53942 55861 . + 0 ID=cds-HIH2188584.1;Parent=gene-ACYKJH_000426;Dbxref=NCBI_GP:HIH2188584.1;Name=HIH2188584.1;gbkey=CDS;gene=tet(O);inference=COORDINATES: similar to AA sequence:RefSeq:WP_032490535.1;locus_tag=ACYKJH_000426;product=tetracycline resistance ribosomal protection protein Tet(O);protein_id=HIH2188584.1;transl_table=11 DBLQKK010000004.1 tpg gene 55916 56086 . + . ID=gene-ACYKJH_000427;Name=ACYKJH_000427;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000427 DBLQKK010000004.1 Protein Homology CDS 55916 56086 . + 0 ID=cds-HIH2188585.1;Parent=gene-ACYKJH_000427;Dbxref=NCBI_GP:HIH2188585.1;Name=HIH2188585.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025568.6;locus_tag=ACYKJH_000427;product=cysteine-rich KTR domain-containing protein;protein_id=HIH2188585.1;transl_table=11 DBLQKK010000004.1 tpg pseudogene 56877 57983 . + . ID=gene-ACYKJH_000428;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=pseudogene;locus_tag=ACYKJH_000428;pseudo=true DBLQKK010000004.1 Protein Homology CDS 56877 57983 . + 0 ID=cds-ACYKJH_000428;Parent=gene-ACYKJH_000428;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015740,GO:0015556,GO:0016020;gbkey=CDS;gene=dcuC;go_component=membrane|0016020||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651065.1;locus_tag=ACYKJH_000428;product=C4-dicarboxylate transporter DcuC;pseudo=true;transl_table=11 DBLQKK010000004.1 tpg gene 57995 59158 . + . ID=gene-ACYKJH_000429;Name=ACYKJH_000429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000429 DBLQKK010000004.1 Protein Homology CDS 57995 59158 . + 0 ID=cds-HIH2188586.1;Parent=gene-ACYKJH_000429;Dbxref=NCBI_GP:HIH2188586.1;Name=HIH2188586.1;Ontology_term=GO:0019346,GO:0016846,GO:0030170;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002866696.1;locus_tag=ACYKJH_000429;product=trans-sulfuration enzyme family protein;protein_id=HIH2188586.1;transl_table=11 DBLQKK010000004.1 tpg gene 59168 60535 . + . ID=gene-ACYKJH_000430;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=ACYKJH_000430 DBLQKK010000004.1 Protein Homology CDS 59168 60535 . + 0 ID=cds-HIH2188587.1;Parent=gene-ACYKJH_000430;Dbxref=NCBI_GP:HIH2188587.1;Name=HIH2188587.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344779.1;locus_tag=ACYKJH_000430;product=adenylosuccinate lyase;protein_id=HIH2188587.1;transl_table=11 DBLQKK010000004.1 tpg pseudogene 60544 61884 . + . ID=gene-ACYKJH_000431;Name=ACYKJH_000431;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_000431;pseudo=true DBLQKK010000004.1 Protein Homology CDS 60544 61884 . + 0 ID=cds-ACYKJH_000431;Parent=gene-ACYKJH_000431;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843169.1;locus_tag=ACYKJH_000431;product=MmgE/PrpD family protein;pseudo=true;transl_table=11 DBLQKK010000004.1 tpg gene 61966 62190 . + . ID=gene-ACYKJH_000432;Name=ACYKJH_000432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000432 DBLQKK010000004.1 Protein Homology CDS 61966 62190 . + 0 ID=cds-HIH2188588.1;Parent=gene-ACYKJH_000432;Dbxref=NCBI_GP:HIH2188588.1;Name=HIH2188588.1;Ontology_term=GO:0006826,GO:0046914;gbkey=CDS;go_function=transition metal ion binding|0046914||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344780.1;locus_tag=ACYKJH_000432;product=FeoA family protein;protein_id=HIH2188588.1;transl_table=11 DBLQKK010000004.1 tpg gene 62187 64028 . + . ID=gene-ACYKJH_000433;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=ACYKJH_000433 DBLQKK010000004.1 Protein Homology CDS 62187 64028 . + 0 ID=cds-HIH2188589.1;Parent=gene-ACYKJH_000433;Dbxref=NCBI_GP:HIH2188589.1;Name=HIH2188589.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344781.1;locus_tag=ACYKJH_000433;product=ferrous iron transport protein B;protein_id=HIH2188589.1;transl_table=11 DBLQKK010000004.1 tpg gene 64025 65518 . - . ID=gene-ACYKJH_000434;Name=ACYKJH_000434;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000434 DBLQKK010000004.1 Protein Homology CDS 64025 65518 . - 0 ID=cds-HIH2188590.1;Parent=gene-ACYKJH_000434;Dbxref=NCBI_GP:HIH2188590.1;Name=HIH2188590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344782.1;locus_tag=ACYKJH_000434;product=hydrogenase small subunit;protein_id=HIH2188590.1;transl_table=11 DBLQKK010000004.1 tpg gene 65522 66346 . - . ID=gene-ACYKJH_000435;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=ACYKJH_000435 DBLQKK010000004.1 Protein Homology CDS 65522 66346 . - 0 ID=cds-HIH2188591.1;Parent=gene-ACYKJH_000435;Dbxref=NCBI_GP:HIH2188591.1;Name=HIH2188591.1;Ontology_term=GO:0006633,GO:0004318;gbkey=CDS;gene=fabI;go_function=enoyl-[acyl-carrier-protein] reductase (NADH) activity|0004318||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344783.1;locus_tag=ACYKJH_000435;product=enoyl-ACP reductase FabI;protein_id=HIH2188591.1;transl_table=11 DBLQKK010000004.1 tpg gene 66350 67021 . - . ID=gene-ACYKJH_000436;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=ACYKJH_000436 DBLQKK010000004.1 Protein Homology CDS 66350 67021 . - 0 ID=cds-HIH2188592.1;Parent=gene-ACYKJH_000436;Dbxref=NCBI_GP:HIH2188592.1;Name=HIH2188592.1;gbkey=CDS;gene=tpiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344784.1;locus_tag=ACYKJH_000436;product=triose-phosphate isomerase;protein_id=HIH2188592.1;transl_table=11 DBLQKK010000004.1 tpg gene 67018 68220 . - . ID=gene-ACYKJH_000437;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=ACYKJH_000437 DBLQKK010000004.1 Protein Homology CDS 67018 68220 . - 0 ID=cds-HIH2188593.1;Parent=gene-ACYKJH_000437;Dbxref=NCBI_GP:HIH2188593.1;Name=HIH2188593.1;Ontology_term=GO:0006096,GO:0004618,GO:0005524,GO:0005737;gbkey=CDS;gene=pgk;go_component=cytoplasm|0005737||IEA;go_function=phosphoglycerate kinase activity|0004618||IEA,ATP binding|0005524||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344785.1;locus_tag=ACYKJH_000437;product=phosphoglycerate kinase;protein_id=HIH2188593.1;transl_table=11 DBLQKK010000004.1 tpg gene 68223 69221 . - . ID=gene-ACYKJH_000438;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=ACYKJH_000438 DBLQKK010000004.1 Protein Homology CDS 68223 69221 . - 0 ID=cds-HIH2188594.1;Parent=gene-ACYKJH_000438;Dbxref=NCBI_GP:HIH2188594.1;Name=HIH2188594.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344786.1;locus_tag=ACYKJH_000438;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=HIH2188594.1;transl_table=11 DBLQKK010000004.1 tpg gene 69281 69826 . + . ID=gene-ACYKJH_000439;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=ACYKJH_000439 DBLQKK010000004.1 Protein Homology CDS 69281 69826 . + 0 ID=cds-HIH2188595.1;Parent=gene-ACYKJH_000439;Dbxref=NCBI_GP:HIH2188595.1;Name=HIH2188595.1;Ontology_term=GO:0009435,GO:0000309,GO:0004515,GO:0005737;gbkey=CDS;gene=nadD;go_component=cytoplasm|0005737||IEA;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,nicotinate-nucleotide adenylyltransferase activity|0004515||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344787.1;locus_tag=ACYKJH_000439;product=nicotinate (nicotinamide) nucleotide adenylyltransferase;protein_id=HIH2188595.1;transl_table=11 DBLQKK010000004.1 tpg gene 69854 70180 . + . ID=gene-ACYKJH_000440;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=ACYKJH_000440 DBLQKK010000004.1 Protein Homology CDS 69854 70180 . + 0 ID=cds-HIH2188596.1;Parent=gene-ACYKJH_000440;Dbxref=NCBI_GP:HIH2188596.1;Name=HIH2188596.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344788.1;locus_tag=ACYKJH_000440;product=ribosome silencing factor;protein_id=HIH2188596.1;transl_table=11 DBLQKK010000004.1 tpg gene 70211 70588 . - . ID=gene-ACYKJH_000441;Name=ACYKJH_000441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000441 DBLQKK010000004.1 Protein Homology CDS 70211 70588 . - 0 ID=cds-HIH2188597.1;Parent=gene-ACYKJH_000441;Dbxref=NCBI_GP:HIH2188597.1;Name=HIH2188597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002870609.1;locus_tag=ACYKJH_000441;product=DUF1090 family protein;protein_id=HIH2188597.1;transl_table=11 DBLQKK010000004.1 tpg pseudogene 70635 72024 . - . ID=gene-ACYKJH_000442;Name=pgmL;gbkey=Gene;gene=pgmL;gene_biotype=pseudogene;locus_tag=ACYKJH_000442;pseudo=true DBLQKK010000004.1 Protein Homology CDS 70635 72024 . - 0 ID=cds-ACYKJH_000442;Parent=gene-ACYKJH_000442;Note=frameshifted;gbkey=CDS;gene=pgmL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344790.1;locus_tag=ACYKJH_000442;product=phosphoglucosamine mutase PgmL;pseudo=true;transl_table=11 DBLQKK010000004.1 tpg gene 72127 72663 . + . ID=gene-ACYKJH_000443;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=ACYKJH_000443 DBLQKK010000004.1 Protein Homology CDS 72127 72663 . + 0 ID=cds-HIH2188598.1;Parent=gene-ACYKJH_000443;Dbxref=NCBI_GP:HIH2188598.1;Name=HIH2188598.1;Ontology_term=GO:0006935,GO:0071973;gbkey=CDS;gene=fliL;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344791.1;locus_tag=ACYKJH_000443;product=flagellar basal body-associated protein FliL;protein_id=HIH2188598.1;transl_table=11 DBLQKK010000004.1 tpg gene 72663 73010 . + . ID=gene-ACYKJH_000444;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=ACYKJH_000444 DBLQKK010000004.1 Protein Homology CDS 72663 73010 . + 0 ID=cds-HIH2188599.1;Parent=gene-ACYKJH_000444;Dbxref=NCBI_GP:HIH2188599.1;Name=HIH2188599.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344792.1;locus_tag=ACYKJH_000444;product=holo-ACP synthase;protein_id=HIH2188599.1;transl_table=11 DBLQKK010000004.1 tpg gene 73011 73430 . - . ID=gene-ACYKJH_000445;Name=ACYKJH_000445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000445 DBLQKK010000004.1 Protein Homology CDS 73011 73430 . - 0 ID=cds-HIH2188600.1;Parent=gene-ACYKJH_000445;Dbxref=NCBI_GP:HIH2188600.1;Name=HIH2188600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344793.1;locus_tag=ACYKJH_000445;product=hypothetical protein;protein_id=HIH2188600.1;transl_table=11 DBLQKK010000004.1 tpg gene 73427 74788 . - . ID=gene-ACYKJH_000446;Name=ACYKJH_000446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000446 DBLQKK010000004.1 Protein Homology CDS 73427 74788 . - 0 ID=cds-HIH2188601.1;Parent=gene-ACYKJH_000446;Dbxref=NCBI_GP:HIH2188601.1;Name=HIH2188601.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344794.1;locus_tag=ACYKJH_000446;product=cytochrome P450;protein_id=HIH2188601.1;transl_table=11 DBLQKK010000004.1 tpg gene 74785 75906 . - . ID=gene-ACYKJH_000447;Name=ACYKJH_000447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000447 DBLQKK010000004.1 Protein Homology CDS 74785 75906 . - 0 ID=cds-HIH2188602.1;Parent=gene-ACYKJH_000447;Dbxref=NCBI_GP:HIH2188602.1;Name=HIH2188602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344795.1;locus_tag=ACYKJH_000447;product=DUF829 domain-containing protein;protein_id=HIH2188602.1;transl_table=11 DBLQKK010000004.1 tpg gene 75979 77163 . - . ID=gene-ACYKJH_000448;Name=kpsS;gbkey=Gene;gene=kpsS;gene_biotype=protein_coding;locus_tag=ACYKJH_000448 DBLQKK010000004.1 Protein Homology CDS 75979 77163 . - 0 ID=cds-HIH2188603.1;Parent=gene-ACYKJH_000448;Dbxref=NCBI_GP:HIH2188603.1;Name=HIH2188603.1;Ontology_term=GO:0000271;gbkey=CDS;gene=kpsS;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344796.1;locus_tag=ACYKJH_000448;product=capsule polysaccharide modification protein KpsS;protein_id=HIH2188603.1;transl_table=11 DBLQKK010000004.1 tpg gene 77160 79229 . - . ID=gene-ACYKJH_000449;Name=kpsC;gbkey=Gene;gene=kpsC;gene_biotype=protein_coding;locus_tag=ACYKJH_000449 DBLQKK010000004.1 Protein Homology CDS 77160 79229 . - 0 ID=cds-HIH2188604.1;Parent=gene-ACYKJH_000449;Dbxref=NCBI_GP:HIH2188604.1;Name=HIH2188604.1;gbkey=CDS;gene=kpsC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344797.1;locus_tag=ACYKJH_000449;product=capsular polysaccharide biosynthesis protein;protein_id=HIH2188604.1;transl_table=11 DBLQKK010000004.1 tpg gene 79226 79738 . - . ID=gene-ACYKJH_000450;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=ACYKJH_000450 DBLQKK010000004.1 Protein Homology CDS 79226 79738 . - 0 ID=cds-HIH2188605.1;Parent=gene-ACYKJH_000450;Dbxref=NCBI_GP:HIH2188605.1;Name=HIH2188605.1;gbkey=CDS;gene=cysC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344798.1;locus_tag=ACYKJH_000450;product=cytidine diphosphoramidate kinase;protein_id=HIH2188605.1;transl_table=11 DBLQKK010000004.1 tpg gene 79728 80489 . - . ID=gene-ACYKJH_000451;Name=ACYKJH_000451;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000451 DBLQKK010000004.1 Protein Homology CDS 79728 80489 . - 0 ID=cds-HIH2188606.1;Parent=gene-ACYKJH_000451;Dbxref=NCBI_GP:HIH2188606.1;Name=HIH2188606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344799.1;locus_tag=ACYKJH_000451;product=CTP:phosphoglutamine cytidylyltransferase;protein_id=HIH2188606.1;transl_table=11 DBLQKK010000004.1 tpg gene 80491 81093 . - . ID=gene-ACYKJH_000452;Name=ACYKJH_000452;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000452 DBLQKK010000004.1 Protein Homology CDS 80491 81093 . - 0 ID=cds-HIH2188607.1;Parent=gene-ACYKJH_000452;Dbxref=NCBI_GP:HIH2188607.1;Name=HIH2188607.1;Ontology_term=GO:0045227,GO:0016811;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=capsule polysaccharide biosynthetic process|0045227||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344800.1;locus_tag=ACYKJH_000452;product=gamma-glutamyl-CDP-amidate hydrolase;protein_id=HIH2188607.1;transl_table=11 DBLQKK010000004.1 tpg gene 81084 83423 . - . ID=gene-ACYKJH_000453;Name=ACYKJH_000453;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000453 DBLQKK010000004.1 Protein Homology CDS 81084 83423 . - 0 ID=cds-HIH2188608.1;Parent=gene-ACYKJH_000453;Dbxref=NCBI_GP:HIH2188608.1;Name=HIH2188608.1;Ontology_term=GO:0016310,GO:0016772;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344801.1;locus_tag=ACYKJH_000453;product=PEP-utilizing enzyme;protein_id=HIH2188608.1;transl_table=11 DBLQKK010000004.1 tpg gene 83438 84199 . - . ID=gene-ACYKJH_000454;Name=ACYKJH_000454;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000454 DBLQKK010000004.1 Protein Homology CDS 83438 84199 . - 0 ID=cds-HIH2188609.1;Parent=gene-ACYKJH_000454;Dbxref=NCBI_GP:HIH2188609.1;Name=HIH2188609.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344802.1;locus_tag=ACYKJH_000454;product=class I SAM-dependent methyltransferase;protein_id=HIH2188609.1;transl_table=11 DBLQKK010000004.1 tpg pseudogene 84251 85023 . - . ID=gene-ACYKJH_000455;Name=ACYKJH_000455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_000455;pseudo=true DBLQKK010000004.1 Protein Homology CDS 84251 85023 . - 0 ID=cds-ACYKJH_000455;Parent=gene-ACYKJH_000455;Note=frameshifted;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344803.1;locus_tag=ACYKJH_000455;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 DBLQKK010000004.1 tpg gene 85079 85930 . - . ID=gene-ACYKJH_000456;Name=ACYKJH_000456;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000456 DBLQKK010000004.1 Protein Homology CDS 85079 85930 . - 0 ID=cds-HIH2188610.1;Parent=gene-ACYKJH_000456;Dbxref=NCBI_GP:HIH2188610.1;Name=HIH2188610.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022634.6;locus_tag=ACYKJH_000456;product=DUF2972 domain-containing protein;protein_id=HIH2188610.1;transl_table=11 DBLQKK010000004.1 tpg gene 85997 86407 . - . ID=gene-ACYKJH_000457;Name=ACYKJH_000457;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000457 DBLQKK010000004.1 GeneMarkS-2+ CDS 85997 86407 . - 0 ID=cds-HIH2188611.1;Parent=gene-ACYKJH_000457;Dbxref=NCBI_GP:HIH2188611.1;Name=HIH2188611.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_000457;product=hypothetical protein;protein_id=HIH2188611.1;transl_table=11 DBLQKK010000004.1 tpg gene 86889 87230 . - . ID=gene-ACYKJH_000458;Name=ACYKJH_000458;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000458 DBLQKK010000004.1 GeneMarkS-2+ CDS 86889 87230 . - 0 ID=cds-HIH2188612.1;Parent=gene-ACYKJH_000458;Dbxref=NCBI_GP:HIH2188612.1;Name=HIH2188612.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_000458;product=hypothetical protein;protein_id=HIH2188612.1;transl_table=11 DBLQKK010000004.1 tpg gene 87377 87649 . - . ID=gene-ACYKJH_000459;Name=ACYKJH_000459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000459 DBLQKK010000004.1 GeneMarkS-2+ CDS 87377 87649 . - 0 ID=cds-HIH2188613.1;Parent=gene-ACYKJH_000459;Dbxref=NCBI_GP:HIH2188613.1;Name=HIH2188613.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_000459;product=hypothetical protein;protein_id=HIH2188613.1;transl_table=11 DBLQKK010000004.1 tpg gene 87700 88251 . - . ID=gene-ACYKJH_000460;Name=ACYKJH_000460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000460 DBLQKK010000004.1 GeneMarkS-2+ CDS 87700 88251 . - 0 ID=cds-HIH2188614.1;Parent=gene-ACYKJH_000460;Dbxref=NCBI_GP:HIH2188614.1;Name=HIH2188614.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_000460;product=hypothetical protein;protein_id=HIH2188614.1;transl_table=11 DBLQKK010000004.1 tpg gene 88356 88595 . - . ID=gene-ACYKJH_000461;Name=ACYKJH_000461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000461 DBLQKK010000004.1 GeneMarkS-2+ CDS 88356 88595 . - 0 ID=cds-HIH2188615.1;Parent=gene-ACYKJH_000461;Dbxref=NCBI_GP:HIH2188615.1;Name=HIH2188615.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_000461;product=hypothetical protein;protein_id=HIH2188615.1;transl_table=11 DBLQKK010000004.1 tpg gene 88858 90330 . - . ID=gene-ACYKJH_000462;Name=ACYKJH_000462;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000462 DBLQKK010000004.1 Protein Homology CDS 88858 90330 . - 0 ID=cds-HIH2188616.1;Parent=gene-ACYKJH_000462;Dbxref=NCBI_GP:HIH2188616.1;Name=HIH2188616.1;Ontology_term=GO:0009058,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898744.1;locus_tag=ACYKJH_000462;product=sugar phosphate nucleotidyltransferase;protein_id=HIH2188616.1;transl_table=11 DBLQKK010000004.1 tpg gene 90332 91057 . - . ID=gene-ACYKJH_000463;Name=ACYKJH_000463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000463 DBLQKK010000004.1 Protein Homology CDS 90332 91057 . - 0 ID=cds-HIH2188617.1;Parent=gene-ACYKJH_000463;Dbxref=NCBI_GP:HIH2188617.1;Name=HIH2188617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002888005.1;locus_tag=ACYKJH_000463;product=class II aldolase/adducin family protein;protein_id=HIH2188617.1;transl_table=11 DBLQKK010000004.1 tpg pseudogene 91044 92346 . - . ID=gene-ACYKJH_000464;Name=ACYKJH_000464;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_000464;pseudo=true DBLQKK010000004.1 Protein Homology CDS 91044 92346 . - 0 ID=cds-ACYKJH_000464;Parent=gene-ACYKJH_000464;Note=frameshifted;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002862083.1;locus_tag=ACYKJH_000464;product=HAD-IA family hydrolase;pseudo=true;transl_table=11 DBLQKK010000004.1 tpg gene 92339 92932 . - . ID=gene-ACYKJH_000465;Name=ACYKJH_000465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000465 DBLQKK010000004.1 Protein Homology CDS 92339 92932 . - 0 ID=cds-HIH2188618.1;Parent=gene-ACYKJH_000465;Dbxref=NCBI_GP:HIH2188618.1;Name=HIH2188618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002779179.1;locus_tag=ACYKJH_000465;product=hypothetical protein;protein_id=HIH2188618.1;transl_table=11 ##sequence-region DBLQKK010000005.1 1 76150 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000005.1 tpg region 1 76150 . + . ID=DBLQKK010000005.1:1..76150;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000005.1 tpg gene 38 3526 . + . ID=gene-ACYKJH_000466;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=ACYKJH_000466 DBLQKK010000005.1 Protein Homology CDS 38 3526 . + 0 ID=cds-HIH2188619.1;Parent=gene-ACYKJH_000466;Dbxref=NCBI_GP:HIH2188619.1;Name=HIH2188619.1;gbkey=CDS;gene=putA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344882.1;locus_tag=ACYKJH_000466;product=proline dehydrogenase family protein;protein_id=HIH2188619.1;transl_table=11 DBLQKK010000005.1 tpg gene 3544 5013 . + . ID=gene-ACYKJH_000467;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=ACYKJH_000467 DBLQKK010000005.1 Protein Homology CDS 3544 5013 . + 0 ID=cds-HIH2188620.1;Parent=gene-ACYKJH_000467;Dbxref=NCBI_GP:HIH2188620.1;Name=HIH2188620.1;Ontology_term=GO:0006814,GO:0015824,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002856275.1;locus_tag=ACYKJH_000467;product=sodium/proline symporter PutP;protein_id=HIH2188620.1;transl_table=11 DBLQKK010000005.1 tpg gene 5029 5256 . - . ID=gene-ACYKJH_000468;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=ACYKJH_000468 DBLQKK010000005.1 Protein Homology CDS 5029 5256 . - 0 ID=cds-HIH2188621.1;Parent=gene-ACYKJH_000468;Dbxref=NCBI_GP:HIH2188621.1;Name=HIH2188621.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344880.1;locus_tag=ACYKJH_000468;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=HIH2188621.1;transl_table=11 DBLQKK010000005.1 tpg gene 5260 6468 . - . ID=gene-ACYKJH_000469;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=ACYKJH_000469 DBLQKK010000005.1 Protein Homology CDS 5260 6468 . - 0 ID=cds-HIH2188622.1;Parent=gene-ACYKJH_000469;Dbxref=NCBI_GP:HIH2188622.1;Name=HIH2188622.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344879.1;locus_tag=ACYKJH_000469;product=selenium metabolism membrane protein YedE/FdhT;protein_id=HIH2188622.1;transl_table=11 DBLQKK010000005.1 tpg gene 6608 6705 . + . ID=gene-ACYKJH_000470;Name=ACYKJH_000470;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_000470 DBLQKK010000005.1 tRNAscan-SE tRNA 6608 6705 . + . ID=rna-ACYKJH_000470;Parent=gene-ACYKJH_000470;anticodon=(pos:6642..6644);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000470;product=tRNA-Sec DBLQKK010000005.1 tRNAscan-SE exon 6608 6705 . + . ID=exon-ACYKJH_000470-1;Parent=rna-ACYKJH_000470;anticodon=(pos:6642..6644);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000470;product=tRNA-Sec DBLQKK010000005.1 tpg gene 6733 7983 . + . ID=gene-ACYKJH_000471;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=ACYKJH_000471 DBLQKK010000005.1 Protein Homology CDS 6733 7983 . + 0 ID=cds-HIH2188623.1;Parent=gene-ACYKJH_000471;Dbxref=NCBI_GP:HIH2188623.1;Name=HIH2188623.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344878.1;locus_tag=ACYKJH_000471;product=adenylosuccinate synthase;protein_id=HIH2188623.1;transl_table=11 DBLQKK010000005.1 tpg gene 7980 8408 . + . ID=gene-ACYKJH_000472;Name=ACYKJH_000472;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000472 DBLQKK010000005.1 Protein Homology CDS 7980 8408 . + 0 ID=cds-HIH2188624.1;Parent=gene-ACYKJH_000472;Dbxref=NCBI_GP:HIH2188624.1;Name=HIH2188624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344877.1;locus_tag=ACYKJH_000472;product=flagellar export protein FliJ;protein_id=HIH2188624.1;transl_table=11 DBLQKK010000005.1 tpg gene 8401 8919 . + . ID=gene-ACYKJH_000473;Name=ACYKJH_000473;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000473 DBLQKK010000005.1 Protein Homology CDS 8401 8919 . + 0 ID=cds-HIH2188625.1;Parent=gene-ACYKJH_000473;Dbxref=NCBI_GP:HIH2188625.1;Name=HIH2188625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344876.1;locus_tag=ACYKJH_000473;product=MotE family protein;protein_id=HIH2188625.1;transl_table=11 DBLQKK010000005.1 tpg gene 9012 9563 . + . ID=gene-ACYKJH_000474;Name=ACYKJH_000474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000474 DBLQKK010000005.1 Protein Homology CDS 9012 9563 . + 0 ID=cds-HIH2188626.1;Parent=gene-ACYKJH_000474;Dbxref=NCBI_GP:HIH2188626.1;Name=HIH2188626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344875.1;locus_tag=ACYKJH_000474;product=DUF507 family protein;protein_id=HIH2188626.1;transl_table=11 DBLQKK010000005.1 tpg gene 9563 10681 . + . ID=gene-ACYKJH_000475;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=ACYKJH_000475 DBLQKK010000005.1 Protein Homology CDS 9563 10681 . + 0 ID=cds-HIH2188627.1;Parent=gene-ACYKJH_000475;Dbxref=NCBI_GP:HIH2188627.1;Name=HIH2188627.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344874.1;locus_tag=ACYKJH_000475;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=HIH2188627.1;transl_table=11 DBLQKK010000005.1 tpg gene 10678 11337 . + . ID=gene-ACYKJH_000476;Name=ACYKJH_000476;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000476 DBLQKK010000005.1 Protein Homology CDS 10678 11337 . + 0 ID=cds-HIH2188628.1;Parent=gene-ACYKJH_000476;Dbxref=NCBI_GP:HIH2188628.1;Name=HIH2188628.1;Ontology_term=GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344873.1;locus_tag=ACYKJH_000476;product=sulfite exporter TauE/SafE family protein;protein_id=HIH2188628.1;transl_table=11 DBLQKK010000005.1 tpg gene 11334 12545 . + . ID=gene-ACYKJH_000477;Name=bumS;gbkey=Gene;gene=bumS;gene_biotype=protein_coding;locus_tag=ACYKJH_000477 DBLQKK010000005.1 Protein Homology CDS 11334 12545 . + 0 ID=cds-HIH2188629.1;Parent=gene-ACYKJH_000477;Dbxref=NCBI_GP:HIH2188629.1;Name=HIH2188629.1;gbkey=CDS;gene=bumS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344872.1;locus_tag=ACYKJH_000477;product=butyrate sensor histidiine kinase-like phosphatase BumS;protein_id=HIH2188629.1;transl_table=11 DBLQKK010000005.1 tpg gene 12548 13228 . + . ID=gene-ACYKJH_000478;Name=bumR;gbkey=Gene;gene=bumR;gene_biotype=protein_coding;locus_tag=ACYKJH_000478 DBLQKK010000005.1 Protein Homology CDS 12548 13228 . + 0 ID=cds-HIH2188630.1;Parent=gene-ACYKJH_000478;Dbxref=NCBI_GP:HIH2188630.1;Name=HIH2188630.1;gbkey=CDS;gene=bumR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344871.1;locus_tag=ACYKJH_000478;product=butyrate response regulator transcription factor BumR;protein_id=HIH2188630.1;transl_table=11 DBLQKK010000005.1 tpg gene 13353 14819 . + . ID=gene-ACYKJH_000479;Name=ccoN;gbkey=Gene;gene=ccoN;gene_biotype=protein_coding;locus_tag=ACYKJH_000479 DBLQKK010000005.1 Protein Homology CDS 13353 14819 . + 0 ID=cds-HIH2188631.1;Parent=gene-ACYKJH_000479;Dbxref=NCBI_GP:HIH2188631.1;Name=HIH2188631.1;Ontology_term=GO:0004129,GO:0045277;gbkey=CDS;gene=ccoN;go_component=respiratory chain complex IV|0045277||IEA;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344870.1;locus_tag=ACYKJH_000479;product=cytochrome-c oxidase%2C cbb3-type subunit I;protein_id=HIH2188631.1;transl_table=11 DBLQKK010000005.1 tpg gene 14832 15497 . + . ID=gene-ACYKJH_000480;Name=ccoO;gbkey=Gene;gene=ccoO;gene_biotype=protein_coding;locus_tag=ACYKJH_000480 DBLQKK010000005.1 Protein Homology CDS 14832 15497 . + 0 ID=cds-HIH2188632.1;Parent=gene-ACYKJH_000480;Dbxref=NCBI_GP:HIH2188632.1;Name=HIH2188632.1;Ontology_term=GO:0004129;gbkey=CDS;gene=ccoO;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344869.1;locus_tag=ACYKJH_000480;product=cytochrome-c oxidase%2C cbb3-type subunit II;protein_id=HIH2188632.1;transl_table=11 DBLQKK010000005.1 tpg gene 15502 15765 . + . ID=gene-ACYKJH_000481;Name=ccoQ;gbkey=Gene;gene=ccoQ;gene_biotype=protein_coding;locus_tag=ACYKJH_000481 DBLQKK010000005.1 Protein Homology CDS 15502 15765 . + 0 ID=cds-HIH2188633.1;Parent=gene-ACYKJH_000481;Dbxref=NCBI_GP:HIH2188633.1;Name=HIH2188633.1;Ontology_term=GO:0004129;gbkey=CDS;gene=ccoQ;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344868.1;locus_tag=ACYKJH_000481;product=cytochrome c oxidase%2C cbb3-type%2C CcoQ subunit;protein_id=HIH2188633.1;transl_table=11 DBLQKK010000005.1 tpg gene 15765 16628 . + . ID=gene-ACYKJH_000482;Name=ccoP;gbkey=Gene;gene=ccoP;gene_biotype=protein_coding;locus_tag=ACYKJH_000482 DBLQKK010000005.1 Protein Homology CDS 15765 16628 . + 0 ID=cds-HIH2188634.1;Parent=gene-ACYKJH_000482;Dbxref=NCBI_GP:HIH2188634.1;Name=HIH2188634.1;gbkey=CDS;gene=ccoP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344867.1;locus_tag=ACYKJH_000482;product=cbb3-type cytochrome c oxidase N-terminal domain-containing protein;protein_id=HIH2188634.1;transl_table=11 DBLQKK010000005.1 tpg gene 16625 16846 . + . ID=gene-ACYKJH_000483;Name=ACYKJH_000483;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000483 DBLQKK010000005.1 Protein Homology CDS 16625 16846 . + 0 ID=cds-HIH2188635.1;Parent=gene-ACYKJH_000483;Dbxref=NCBI_GP:HIH2188635.1;Name=HIH2188635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344866.1;locus_tag=ACYKJH_000483;product=DUF4006 family protein;protein_id=HIH2188635.1;transl_table=11 DBLQKK010000005.1 tpg gene 16843 16944 . + . ID=gene-ACYKJH_000484;Name=ACYKJH_000484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000484 DBLQKK010000005.1 Protein Homology CDS 16843 16944 . + 0 ID=cds-HIH2188636.1;Parent=gene-ACYKJH_000484;Dbxref=NCBI_GP:HIH2188636.1;Name=HIH2188636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344865.1;locus_tag=ACYKJH_000484;product=hypothetical protein;protein_id=HIH2188636.1;transl_table=11 DBLQKK010000005.1 tpg gene 16941 17540 . + . ID=gene-ACYKJH_000485;Name=ACYKJH_000485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000485 DBLQKK010000005.1 Protein Homology CDS 16941 17540 . + 0 ID=cds-HIH2188637.1;Parent=gene-ACYKJH_000485;Dbxref=NCBI_GP:HIH2188637.1;Name=HIH2188637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344864.1;locus_tag=ACYKJH_000485;product=hypothetical protein;protein_id=HIH2188637.1;transl_table=11 DBLQKK010000005.1 tpg gene 17527 18048 . + . ID=gene-ACYKJH_000486;Name=ACYKJH_000486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000486 DBLQKK010000005.1 Protein Homology CDS 17527 18048 . + 0 ID=cds-HIH2188638.1;Parent=gene-ACYKJH_000486;Dbxref=NCBI_GP:HIH2188638.1;Name=HIH2188638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344863.1;locus_tag=ACYKJH_000486;product=FixH family protein;protein_id=HIH2188638.1;transl_table=11 DBLQKK010000005.1 tpg gene 18045 20411 . + . ID=gene-ACYKJH_000487;Name=ACYKJH_000487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000487 DBLQKK010000005.1 Protein Homology CDS 18045 20411 . + 0 ID=cds-HIH2188639.1;Parent=gene-ACYKJH_000487;Dbxref=NCBI_GP:HIH2188639.1;Name=HIH2188639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344862.1;locus_tag=ACYKJH_000487;product=PD-(D/E)XK nuclease family protein;protein_id=HIH2188639.1;transl_table=11 DBLQKK010000005.1 tpg gene 20408 23173 . + . ID=gene-ACYKJH_000488;Name=ACYKJH_000488;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000488 DBLQKK010000005.1 Protein Homology CDS 20408 23173 . + 0 ID=cds-HIH2188640.1;Parent=gene-ACYKJH_000488;Dbxref=NCBI_GP:HIH2188640.1;Name=HIH2188640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344861.1;locus_tag=ACYKJH_000488;product=RecB-like helicase;protein_id=HIH2188640.1;transl_table=11 DBLQKK010000005.1 tpg gene 23258 23683 . + . ID=gene-ACYKJH_000489;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=ACYKJH_000489 DBLQKK010000005.1 Protein Homology CDS 23258 23683 . + 0 ID=cds-HIH2188641.1;Parent=gene-ACYKJH_000489;Dbxref=NCBI_GP:HIH2188641.1;Name=HIH2188641.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344860.1;locus_tag=ACYKJH_000489;product=50S ribosomal protein L13;protein_id=HIH2188641.1;transl_table=11 DBLQKK010000005.1 tpg gene 23686 24075 . + . ID=gene-ACYKJH_000490;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=ACYKJH_000490 DBLQKK010000005.1 Protein Homology CDS 23686 24075 . + 0 ID=cds-HIH2188642.1;Parent=gene-ACYKJH_000490;Dbxref=NCBI_GP:HIH2188642.1;Name=HIH2188642.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344859.1;locus_tag=ACYKJH_000490;product=30S ribosomal protein S9;protein_id=HIH2188642.1;transl_table=11 DBLQKK010000005.1 tpg gene 24200 25159 . + . ID=gene-ACYKJH_000491;Name=cadF;gbkey=Gene;gene=cadF;gene_biotype=protein_coding;locus_tag=ACYKJH_000491 DBLQKK010000005.1 Protein Homology CDS 24200 25159 . + 0 ID=cds-HIH2188643.1;Parent=gene-ACYKJH_000491;Dbxref=NCBI_GP:HIH2188643.1;Name=HIH2188643.1;gbkey=CDS;gene=cadF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344858.1;locus_tag=ACYKJH_000491;product=fibronectin-binding outer membrane protein CadF;protein_id=HIH2188643.1;transl_table=11 DBLQKK010000005.1 tpg gene 25159 25800 . + . ID=gene-ACYKJH_000492;Name=ACYKJH_000492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000492 DBLQKK010000005.1 Protein Homology CDS 25159 25800 . + 0 ID=cds-HIH2188644.1;Parent=gene-ACYKJH_000492;Dbxref=NCBI_GP:HIH2188644.1;Name=HIH2188644.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344857.1;locus_tag=ACYKJH_000492;product=HAD family hydrolase;protein_id=HIH2188644.1;transl_table=11 DBLQKK010000005.1 tpg gene 25893 29453 . + . ID=gene-ACYKJH_000493;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=ACYKJH_000493 DBLQKK010000005.1 Protein Homology CDS 25893 29453 . + 0 ID=cds-HIH2188645.1;Parent=gene-ACYKJH_000493;Dbxref=NCBI_GP:HIH2188645.1;Name=HIH2188645.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344856.1;locus_tag=ACYKJH_000493;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=HIH2188645.1;transl_table=11 DBLQKK010000005.1 tpg gene 29477 29788 . + . ID=gene-ACYKJH_000494;Name=ctsR;gbkey=Gene;gene=ctsR;gene_biotype=protein_coding;locus_tag=ACYKJH_000494 DBLQKK010000005.1 Protein Homology CDS 29477 29788 . + 0 ID=cds-HIH2188646.1;Parent=gene-ACYKJH_000494;Dbxref=NCBI_GP:HIH2188646.1;Name=HIH2188646.1;gbkey=CDS;gene=ctsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011990802.1;locus_tag=ACYKJH_000494;product=transformation system protein;protein_id=HIH2188646.1;transl_table=11 DBLQKK010000005.1 tpg gene 29766 31178 . + . ID=gene-ACYKJH_000495;Name=mshL;gbkey=Gene;gene=mshL;gene_biotype=protein_coding;locus_tag=ACYKJH_000495 DBLQKK010000005.1 Protein Homology CDS 29766 31178 . + 0 ID=cds-HIH2188647.1;Parent=gene-ACYKJH_000495;Dbxref=NCBI_GP:HIH2188647.1;Name=HIH2188647.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=mshL;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344854.1;locus_tag=ACYKJH_000495;product=pilus (MSHA type) biogenesis protein MshL;protein_id=HIH2188647.1;transl_table=11 DBLQKK010000005.1 tpg gene 31171 31779 . + . ID=gene-ACYKJH_000496;Name=ctsP;gbkey=Gene;gene=ctsP;gene_biotype=protein_coding;locus_tag=ACYKJH_000496 DBLQKK010000005.1 Protein Homology CDS 31171 31779 . + 0 ID=cds-HIH2188648.1;Parent=gene-ACYKJH_000496;Dbxref=NCBI_GP:HIH2188648.1;Name=HIH2188648.1;gbkey=CDS;gene=ctsP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344853.1;locus_tag=ACYKJH_000496;product=ATP-binding protein;protein_id=HIH2188648.1;transl_table=11 DBLQKK010000005.1 tpg gene 31783 32370 . + . ID=gene-ACYKJH_000497;Name=ACYKJH_000497;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000497 DBLQKK010000005.1 Protein Homology CDS 31783 32370 . + 0 ID=cds-HIH2188649.1;Parent=gene-ACYKJH_000497;Dbxref=NCBI_GP:HIH2188649.1;Name=HIH2188649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344852.1;locus_tag=ACYKJH_000497;product=transformation system protein;protein_id=HIH2188649.1;transl_table=11 DBLQKK010000005.1 tpg gene 32360 33919 . + . ID=gene-ACYKJH_000498;Name=ctsE;gbkey=Gene;gene=ctsE;gene_biotype=protein_coding;locus_tag=ACYKJH_000498 DBLQKK010000005.1 Protein Homology CDS 32360 33919 . + 0 ID=cds-HIH2188650.1;Parent=gene-ACYKJH_000498;Dbxref=NCBI_GP:HIH2188650.1;Name=HIH2188650.1;Ontology_term=GO:0009306,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;gene=ctsE;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344851.1;locus_tag=ACYKJH_000498;product=GspE/PulE family protein;protein_id=HIH2188650.1;transl_table=11 DBLQKK010000005.1 tpg gene 33916 35097 . + . ID=gene-ACYKJH_000499;Name=ACYKJH_000499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000499 DBLQKK010000005.1 Protein Homology CDS 33916 35097 . + 0 ID=cds-HIH2188651.1;Parent=gene-ACYKJH_000499;Dbxref=NCBI_GP:HIH2188651.1;Name=HIH2188651.1;Ontology_term=GO:0015628,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002880441.1;locus_tag=ACYKJH_000499;product=type II secretion system F family protein;protein_id=HIH2188651.1;transl_table=11 DBLQKK010000005.1 tpg gene 35090 35854 . - . ID=gene-ACYKJH_000500;Name=ACYKJH_000500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000500 DBLQKK010000005.1 Protein Homology CDS 35090 35854 . - 0 ID=cds-HIH2188652.1;Parent=gene-ACYKJH_000500;Dbxref=NCBI_GP:HIH2188652.1;Name=HIH2188652.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344850.1;locus_tag=ACYKJH_000500;product=TSUP family transporter;protein_id=HIH2188652.1;transl_table=11 DBLQKK010000005.1 tpg gene 35858 36622 . - . ID=gene-ACYKJH_000501;Name=ACYKJH_000501;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000501 DBLQKK010000005.1 Protein Homology CDS 35858 36622 . - 0 ID=cds-HIH2188653.1;Parent=gene-ACYKJH_000501;Dbxref=NCBI_GP:HIH2188653.1;Name=HIH2188653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344849.1;locus_tag=ACYKJH_000501;product=TIGR02757 family protein;protein_id=HIH2188653.1;transl_table=11 DBLQKK010000005.1 tpg gene 36639 38465 . - . ID=gene-ACYKJH_000502;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=ACYKJH_000502 DBLQKK010000005.1 Protein Homology CDS 36639 38465 . - 0 ID=cds-HIH2188654.1;Parent=gene-ACYKJH_000502;Dbxref=NCBI_GP:HIH2188654.1;Name=HIH2188654.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344848.1;locus_tag=ACYKJH_000502;product=flagellar hook-associated protein FlgK;protein_id=HIH2188654.1;transl_table=11 DBLQKK010000005.1 tpg gene 38475 38909 . - . ID=gene-ACYKJH_000503;Name=ACYKJH_000503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000503 DBLQKK010000005.1 Protein Homology CDS 38475 38909 . - 0 ID=cds-HIH2188655.1;Parent=gene-ACYKJH_000503;Dbxref=NCBI_GP:HIH2188655.1;Name=HIH2188655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344847.1;locus_tag=ACYKJH_000503;product=flagellar protein FlgN;protein_id=HIH2188655.1;transl_table=11 DBLQKK010000005.1 tpg gene 38952 39149 . - . ID=gene-ACYKJH_000504;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=ACYKJH_000504 DBLQKK010000005.1 Protein Homology CDS 38952 39149 . - 0 ID=cds-HIH2188656.1;Parent=gene-ACYKJH_000504;Dbxref=NCBI_GP:HIH2188656.1;Name=HIH2188656.1;gbkey=CDS;gene=flgM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344846.1;locus_tag=ACYKJH_000504;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=HIH2188656.1;transl_table=11 DBLQKK010000005.1 tpg gene 39212 39553 . - . ID=gene-ACYKJH_000505;Name=ACYKJH_000505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000505 DBLQKK010000005.1 Protein Homology CDS 39212 39553 . - 0 ID=cds-HIH2188657.1;Parent=gene-ACYKJH_000505;Dbxref=NCBI_GP:HIH2188657.1;Name=HIH2188657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344845.1;locus_tag=ACYKJH_000505;product=hypothetical protein;protein_id=HIH2188657.1;transl_table=11 DBLQKK010000005.1 tpg gene 39553 40599 . - . ID=gene-ACYKJH_000506;Name=flgI;gbkey=Gene;gene=flgI;gene_biotype=protein_coding;locus_tag=ACYKJH_000506 DBLQKK010000005.1 Protein Homology CDS 39553 40599 . - 0 ID=cds-HIH2188658.1;Parent=gene-ACYKJH_000506;Dbxref=NCBI_GP:HIH2188658.1;Name=HIH2188658.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;gene=flgI;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344844.1;locus_tag=ACYKJH_000506;product=flagellar basal body P-ring protein FlgI;protein_id=HIH2188658.1;transl_table=11 DBLQKK010000005.1 tpg gene 40658 41341 . - . ID=gene-ACYKJH_000507;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=ACYKJH_000507 DBLQKK010000005.1 Protein Homology CDS 40658 41341 . - 0 ID=cds-HIH2188659.1;Parent=gene-ACYKJH_000507;Dbxref=NCBI_GP:HIH2188659.1;Name=HIH2188659.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344843.1;locus_tag=ACYKJH_000507;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=HIH2188659.1;transl_table=11 DBLQKK010000005.1 tpg gene 41334 41717 . - . ID=gene-ACYKJH_000508;Name=ACYKJH_000508;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000508 DBLQKK010000005.1 Protein Homology CDS 41334 41717 . - 0 ID=cds-HIH2188660.1;Parent=gene-ACYKJH_000508;Dbxref=NCBI_GP:HIH2188660.1;Name=HIH2188660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344842.1;locus_tag=ACYKJH_000508;product=hypothetical protein;protein_id=HIH2188660.1;transl_table=11 DBLQKK010000005.1 tpg gene 41714 42787 . - . ID=gene-ACYKJH_000509;Name=ACYKJH_000509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000509 DBLQKK010000005.1 Protein Homology CDS 41714 42787 . - 0 ID=cds-HIH2188661.1;Parent=gene-ACYKJH_000509;Dbxref=NCBI_GP:HIH2188661.1;Name=HIH2188661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344841.1;locus_tag=ACYKJH_000509;product=DUF5644 domain-containing protein;protein_id=HIH2188661.1;transl_table=11 DBLQKK010000005.1 tpg gene 42874 43695 . + . ID=gene-ACYKJH_000510;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=ACYKJH_000510 DBLQKK010000005.1 Protein Homology CDS 42874 43695 . + 0 ID=cds-HIH2188662.1;Parent=gene-ACYKJH_000510;Dbxref=NCBI_GP:HIH2188662.1;Name=HIH2188662.1;gbkey=CDS;gene=thiL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344840.1;locus_tag=ACYKJH_000510;product=thiamine-phosphate kinase;protein_id=HIH2188662.1;transl_table=11 DBLQKK010000005.1 tpg gene 43664 44782 . + . ID=gene-ACYKJH_000511;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=ACYKJH_000511 DBLQKK010000005.1 Protein Homology CDS 43664 44782 . + 0 ID=cds-HIH2188663.1;Parent=gene-ACYKJH_000511;Dbxref=NCBI_GP:HIH2188663.1;Name=HIH2188663.1;Ontology_term=GO:0001522,GO:0009451,GO:0009982;gbkey=CDS;gene=truD;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344839.1;locus_tag=ACYKJH_000511;product=tRNA pseudouridine(13) synthase TruD;protein_id=HIH2188663.1;transl_table=11 DBLQKK010000005.1 tpg pseudogene 44904 45219 . + . ID=gene-ACYKJH_000512;Name=ACYKJH_000512;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_000512;pseudo=true DBLQKK010000005.1 Protein Homology CDS 44904 45219 . + 0 ID=cds-ACYKJH_000512;Parent=gene-ACYKJH_000512;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344838.1;locus_tag=ACYKJH_000512;product=hypothetical protein;pseudo=true;transl_table=11 DBLQKK010000005.1 tpg gene 45377 46474 . - . ID=gene-ACYKJH_000513;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=ACYKJH_000513 DBLQKK010000005.1 Protein Homology CDS 45377 46474 . - 0 ID=cds-HIH2188664.1;Parent=gene-ACYKJH_000513;Dbxref=NCBI_GP:HIH2188664.1;Name=HIH2188664.1;Ontology_term=GO:0006415,GO:0016149,GO:0005737;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344837.1;locus_tag=ACYKJH_000513;product=peptide chain release factor 2;protein_id=HIH2188664.1;transl_table=11 DBLQKK010000005.1 tpg gene 46548 47867 . + . ID=gene-ACYKJH_000514;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=ACYKJH_000514 DBLQKK010000005.1 Protein Homology CDS 46548 47867 . + 0 ID=cds-HIH2188665.1;Parent=gene-ACYKJH_000514;Dbxref=NCBI_GP:HIH2188665.1;Name=HIH2188665.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344836.1;locus_tag=ACYKJH_000514;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=HIH2188665.1;transl_table=11 DBLQKK010000005.1 tpg gene 47857 48822 . + . ID=gene-ACYKJH_000515;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=ACYKJH_000515 DBLQKK010000005.1 Protein Homology CDS 47857 48822 . + 0 ID=cds-HIH2188666.1;Parent=gene-ACYKJH_000515;Dbxref=NCBI_GP:HIH2188666.1;Name=HIH2188666.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344835.1;locus_tag=ACYKJH_000515;product=tRNA lysidine(34) synthetase TilS;protein_id=HIH2188666.1;transl_table=11 DBLQKK010000005.1 tpg gene 48805 49518 . - . ID=gene-ACYKJH_000516;Name=ACYKJH_000516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000516 DBLQKK010000005.1 Protein Homology CDS 48805 49518 . - 0 ID=cds-HIH2188667.1;Parent=gene-ACYKJH_000516;Dbxref=NCBI_GP:HIH2188667.1;Name=HIH2188667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344834.1;locus_tag=ACYKJH_000516;product=EI24 domain-containing protein;protein_id=HIH2188667.1;transl_table=11 DBLQKK010000005.1 tpg gene 49520 50209 . - . ID=gene-ACYKJH_000517;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=ACYKJH_000517 DBLQKK010000005.1 Protein Homology CDS 49520 50209 . - 0 ID=cds-HIH2188668.1;Parent=gene-ACYKJH_000517;Dbxref=NCBI_GP:HIH2188668.1;Name=HIH2188668.1;gbkey=CDS;gene=dut;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344833.1;locus_tag=ACYKJH_000517;product=dUTPase;protein_id=HIH2188668.1;transl_table=11 DBLQKK010000005.1 tpg gene 50246 50809 . - . ID=gene-ACYKJH_000518;Name=ciaI;gbkey=Gene;gene=ciaI;gene_biotype=protein_coding;locus_tag=ACYKJH_000518 DBLQKK010000005.1 Protein Homology CDS 50246 50809 . - 0 ID=cds-HIH2188669.1;Parent=gene-ACYKJH_000518;Dbxref=NCBI_GP:HIH2188669.1;Name=HIH2188669.1;gbkey=CDS;gene=ciaI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344832.1;locus_tag=ACYKJH_000518;product=intracellular survival protein CiaI;protein_id=HIH2188669.1;transl_table=11 DBLQKK010000005.1 tpg gene 50884 51291 . + . ID=gene-ACYKJH_000519;Name=ACYKJH_000519;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000519 DBLQKK010000005.1 Protein Homology CDS 50884 51291 . + 0 ID=cds-HIH2188670.1;Parent=gene-ACYKJH_000519;Dbxref=NCBI_GP:HIH2188670.1;Name=HIH2188670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344831.1;locus_tag=ACYKJH_000519;product=hypothetical protein;protein_id=HIH2188670.1;transl_table=11 DBLQKK010000005.1 tpg gene 51363 52145 . + . ID=gene-ACYKJH_000520;Name=kpsM;gbkey=Gene;gene=kpsM;gene_biotype=protein_coding;locus_tag=ACYKJH_000520 DBLQKK010000005.1 Protein Homology CDS 51363 52145 . + 0 ID=cds-HIH2188671.1;Parent=gene-ACYKJH_000520;Dbxref=NCBI_GP:HIH2188671.1;Name=HIH2188671.1;Ontology_term=GO:0015920,GO:0055085,GO:0140359;gbkey=CDS;gene=kpsM;go_function=ABC-type transporter activity|0140359||IEA;go_process=lipopolysaccharide transport|0015920||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344830.1;locus_tag=ACYKJH_000520;product=capsule polysaccharide transporter KpsM;protein_id=HIH2188671.1;transl_table=11 DBLQKK010000005.1 tpg gene 52142 52804 . + . ID=gene-ACYKJH_000521;Name=kpsT;gbkey=Gene;gene=kpsT;gene_biotype=protein_coding;locus_tag=ACYKJH_000521 DBLQKK010000005.1 Protein Homology CDS 52142 52804 . + 0 ID=cds-HIH2188672.1;Parent=gene-ACYKJH_000521;Dbxref=NCBI_GP:HIH2188672.1;Name=HIH2188672.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=kpsT;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002781126.1;locus_tag=ACYKJH_000521;product=ABC transporter ATP-binding protein;protein_id=HIH2188672.1;transl_table=11 DBLQKK010000005.1 tpg gene 52804 53922 . + . ID=gene-ACYKJH_000522;Name=kpsE;gbkey=Gene;gene=kpsE;gene_biotype=protein_coding;locus_tag=ACYKJH_000522 DBLQKK010000005.1 Protein Homology CDS 52804 53922 . + 0 ID=cds-HIH2188673.1;Parent=gene-ACYKJH_000522;Dbxref=NCBI_GP:HIH2188673.1;Name=HIH2188673.1;gbkey=CDS;gene=kpsE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344828.1;locus_tag=ACYKJH_000522;product=capsule biosynthesis protein;protein_id=HIH2188673.1;transl_table=11 DBLQKK010000005.1 tpg gene 53924 55582 . + . ID=gene-ACYKJH_000523;Name=kpsD;gbkey=Gene;gene=kpsD;gene_biotype=protein_coding;locus_tag=ACYKJH_000523 DBLQKK010000005.1 Protein Homology CDS 53924 55582 . + 0 ID=cds-HIH2188674.1;Parent=gene-ACYKJH_000523;Dbxref=NCBI_GP:HIH2188674.1;Name=HIH2188674.1;Ontology_term=GO:0015774,GO:0015159,GO:0016020;gbkey=CDS;gene=kpsD;go_component=membrane|0016020||IEA;go_function=polysaccharide transmembrane transporter activity|0015159||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344827.1;locus_tag=ACYKJH_000523;product=polysaccharide biosynthesis/export family protein;protein_id=HIH2188674.1;transl_table=11 DBLQKK010000005.1 tpg gene 55592 56539 . + . ID=gene-ACYKJH_000524;Name=kpsF;gbkey=Gene;gene=kpsF;gene_biotype=protein_coding;locus_tag=ACYKJH_000524 DBLQKK010000005.1 Protein Homology CDS 55592 56539 . + 0 ID=cds-HIH2188675.1;Parent=gene-ACYKJH_000524;Dbxref=NCBI_GP:HIH2188675.1;Name=HIH2188675.1;Ontology_term=GO:0005975,GO:0016853,GO:0046872,GO:0097367;gbkey=CDS;gene=kpsF;go_function=isomerase activity|0016853||IEA,metal ion binding|0046872||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344826.1;locus_tag=ACYKJH_000524;product=KpsF/GutQ family sugar-phosphate isomerase;protein_id=HIH2188675.1;transl_table=11 DBLQKK010000005.1 tpg gene 56541 58193 . + . ID=gene-ACYKJH_000525;Name=ACYKJH_000525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000525 DBLQKK010000005.1 Protein Homology CDS 56541 58193 . + 0 ID=cds-HIH2188676.1;Parent=gene-ACYKJH_000525;Dbxref=NCBI_GP:HIH2188676.1;Name=HIH2188676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004284262.1;locus_tag=ACYKJH_000525;product=glycosyltransferase;protein_id=HIH2188676.1;transl_table=11 DBLQKK010000005.1 tpg gene 58180 59574 . + . ID=gene-ACYKJH_000526;Name=ACYKJH_000526;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000526 DBLQKK010000005.1 Protein Homology CDS 58180 59574 . + 0 ID=cds-HIH2188677.1;Parent=gene-ACYKJH_000526;Dbxref=NCBI_GP:HIH2188677.1;Name=HIH2188677.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002862098.1;locus_tag=ACYKJH_000526;product=glycosyltransferase family 2 protein;protein_id=HIH2188677.1;transl_table=11 DBLQKK010000005.1 tpg gene 59562 61562 . + . ID=gene-ACYKJH_000527;Name=ACYKJH_000527;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000527 DBLQKK010000005.1 Protein Homology CDS 59562 61562 . + 0 ID=cds-HIH2188678.1;Parent=gene-ACYKJH_000527;Dbxref=NCBI_GP:HIH2188678.1;Name=HIH2188678.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887760.1;locus_tag=ACYKJH_000527;product=glycosyltransferase family 2 protein;protein_id=HIH2188678.1;transl_table=11 DBLQKK010000005.1 tpg gene 61549 64425 . + . ID=gene-ACYKJH_000528;Name=ACYKJH_000528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000528 DBLQKK010000005.1 Protein Homology CDS 61549 64425 . + 0 ID=cds-HIH2188679.1;Parent=gene-ACYKJH_000528;Dbxref=NCBI_GP:HIH2188679.1;Name=HIH2188679.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF013652.6;locus_tag=ACYKJH_000528;product=glycosyltransferase;protein_id=HIH2188679.1;transl_table=11 DBLQKK010000005.1 tpg gene 64422 65129 . + . ID=gene-ACYKJH_000529;Name=ACYKJH_000529;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000529 DBLQKK010000005.1 Protein Homology CDS 64422 65129 . + 0 ID=cds-HIH2188680.1;Parent=gene-ACYKJH_000529;Dbxref=NCBI_GP:HIH2188680.1;Name=HIH2188680.1;Ontology_term=GO:0019441,GO:0004061;gbkey=CDS;go_function=arylformamidase activity|0004061||IEA;go_process=L-tryptophan catabolic process to kynurenine|0019441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887763.1;locus_tag=ACYKJH_000529;product=cyclase family protein;protein_id=HIH2188680.1;transl_table=11 DBLQKK010000005.1 tpg gene 65126 65698 . + . ID=gene-ACYKJH_000530;Name=ACYKJH_000530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000530 DBLQKK010000005.1 Protein Homology CDS 65126 65698 . + 0 ID=cds-HIH2188681.1;Parent=gene-ACYKJH_000530;Dbxref=NCBI_GP:HIH2188681.1;Name=HIH2188681.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887767.1;locus_tag=ACYKJH_000530;product=SIS domain-containing protein;protein_id=HIH2188681.1;transl_table=11 DBLQKK010000005.1 tpg gene 65703 66710 . + . ID=gene-ACYKJH_000531;Name=ACYKJH_000531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000531 DBLQKK010000005.1 Protein Homology CDS 65703 66710 . + 0 ID=cds-HIH2188682.1;Parent=gene-ACYKJH_000531;Dbxref=NCBI_GP:HIH2188682.1;Name=HIH2188682.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002784860.1;locus_tag=ACYKJH_000531;product=Gfo/Idh/MocA family protein;protein_id=HIH2188682.1;transl_table=11 DBLQKK010000005.1 tpg gene 66703 67413 . + . ID=gene-ACYKJH_000532;Name=ACYKJH_000532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000532 DBLQKK010000005.1 Protein Homology CDS 66703 67413 . + 0 ID=cds-HIH2188683.1;Parent=gene-ACYKJH_000532;Dbxref=NCBI_GP:HIH2188683.1;Name=HIH2188683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002784861.1;locus_tag=ACYKJH_000532;product=cytidylyltransferase domain-containing protein;protein_id=HIH2188683.1;transl_table=11 DBLQKK010000005.1 tpg gene 67403 68335 . + . ID=gene-ACYKJH_000533;Name=ACYKJH_000533;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000533 DBLQKK010000005.1 Protein Homology CDS 67403 68335 . + 0 ID=cds-HIH2188684.1;Parent=gene-ACYKJH_000533;Dbxref=NCBI_GP:HIH2188684.1;Name=HIH2188684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887773.1;locus_tag=ACYKJH_000533;product=phosphoglycerate dehydrogenase;protein_id=HIH2188684.1;transl_table=11 DBLQKK010000005.1 tpg gene 68335 68829 . + . ID=gene-ACYKJH_000534;Name=ACYKJH_000534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000534 DBLQKK010000005.1 Protein Homology CDS 68335 68829 . + 0 ID=cds-HIH2188685.1;Parent=gene-ACYKJH_000534;Dbxref=NCBI_GP:HIH2188685.1;Name=HIH2188685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002784863.1;locus_tag=ACYKJH_000534;product=YhcH/YjgK/YiaL family protein;protein_id=HIH2188685.1;transl_table=11 DBLQKK010000005.1 tpg gene 68826 69575 . + . ID=gene-ACYKJH_000535;Name=ACYKJH_000535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000535 DBLQKK010000005.1 Protein Homology CDS 68826 69575 . + 0 ID=cds-HIH2188686.1;Parent=gene-ACYKJH_000535;Dbxref=NCBI_GP:HIH2188686.1;Name=HIH2188686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887776.1;locus_tag=ACYKJH_000535;product=inositol monophosphatase family protein;protein_id=HIH2188686.1;transl_table=11 DBLQKK010000005.1 tpg gene 69556 72822 . + . ID=gene-ACYKJH_000536;Name=ACYKJH_000536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000536 DBLQKK010000005.1 Protein Homology CDS 69556 72822 . + 0 ID=cds-HIH2188687.1;Parent=gene-ACYKJH_000536;Dbxref=NCBI_GP:HIH2188687.1;Name=HIH2188687.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017011.6;locus_tag=ACYKJH_000536;product=hypothetical protein;protein_id=HIH2188687.1;transl_table=11 DBLQKK010000005.1 tpg gene 72832 74829 . + . ID=gene-ACYKJH_000537;Name=ACYKJH_000537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000537 DBLQKK010000005.1 GeneMarkS-2+ CDS 72832 74829 . + 0 ID=cds-HIH2188688.1;Parent=gene-ACYKJH_000537;Dbxref=NCBI_GP:HIH2188688.1;Name=HIH2188688.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_000537;product=hypothetical protein;protein_id=HIH2188688.1;transl_table=11 DBLQKK010000005.1 tpg gene 74826 76150 . + . ID=gene-ACYKJH_000538;Name=ACYKJH_000538;end_range=76150,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000538;partial=true DBLQKK010000005.1 GeneMarkS-2+ CDS 74826 76150 . + 0 ID=cds-HIH2188689.1;Parent=gene-ACYKJH_000538;Dbxref=NCBI_GP:HIH2188689.1;Name=HIH2188689.1;end_range=76150,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_000538;partial=true;product=hypothetical protein;protein_id=HIH2188689.1;transl_table=11 ##sequence-region DBLQKK010000006.1 1 71473 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000006.1 tpg region 1 71473 . + . ID=DBLQKK010000006.1:1..71473;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000006.1 tpg gene 1 538 . - . ID=gene-ACYKJH_000539;Name=ACYKJH_000539;gbkey=Gene;gene_biotype=rRNA;locus_tag=ACYKJH_000539;partial=true;start_range=.,1 DBLQKK010000006.1 cmsearch rRNA 1 538 . - . ID=rna-ACYKJH_000539;Parent=gene-ACYKJH_000539;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKJH_000539;partial=true;product=23S ribosomal RNA;start_range=.,1 DBLQKK010000006.1 cmsearch exon 1 538 . - . ID=exon-ACYKJH_000539-1;Parent=rna-ACYKJH_000539;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKJH_000539;partial=true;product=23S ribosomal RNA;start_range=.,1 DBLQKK010000006.1 tpg gene 1074 1150 . - . ID=gene-ACYKJH_000540;Name=ACYKJH_000540;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_000540 DBLQKK010000006.1 tRNAscan-SE tRNA 1074 1150 . - . ID=rna-ACYKJH_000540;Parent=gene-ACYKJH_000540;anticodon=(pos:complement(1114..1116));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000540;product=tRNA-Ile DBLQKK010000006.1 tRNAscan-SE exon 1074 1150 . - . ID=exon-ACYKJH_000540-1;Parent=rna-ACYKJH_000540;anticodon=(pos:complement(1114..1116));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000540;product=tRNA-Ile DBLQKK010000006.1 tpg gene 1159 1234 . - . ID=gene-ACYKJH_000541;Name=ACYKJH_000541;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_000541 DBLQKK010000006.1 tRNAscan-SE tRNA 1159 1234 . - . ID=rna-ACYKJH_000541;Parent=gene-ACYKJH_000541;anticodon=(pos:complement(1199..1201));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000541;product=tRNA-Ala DBLQKK010000006.1 tRNAscan-SE exon 1159 1234 . - . ID=exon-ACYKJH_000541-1;Parent=rna-ACYKJH_000541;anticodon=(pos:complement(1199..1201));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000541;product=tRNA-Ala DBLQKK010000006.1 tpg gene 1337 2849 . - . ID=gene-ACYKJH_000542;Name=ACYKJH_000542;gbkey=Gene;gene_biotype=rRNA;locus_tag=ACYKJH_000542 DBLQKK010000006.1 cmsearch rRNA 1337 2849 . - . ID=rna-ACYKJH_000542;Parent=gene-ACYKJH_000542;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKJH_000542;product=16S ribosomal RNA DBLQKK010000006.1 cmsearch exon 1337 2849 . - . ID=exon-ACYKJH_000542-1;Parent=rna-ACYKJH_000542;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKJH_000542;product=16S ribosomal RNA DBLQKK010000006.1 tpg gene 3331 4068 . - . ID=gene-ACYKJH_000543;Name=ACYKJH_000543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000543 DBLQKK010000006.1 Protein Homology CDS 3331 4068 . - 0 ID=cds-HIH2188690.1;Parent=gene-ACYKJH_000543;Dbxref=NCBI_GP:HIH2188690.1;Name=HIH2188690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002867936.1;locus_tag=ACYKJH_000543;product=ATP-binding protein;protein_id=HIH2188690.1;transl_table=11 DBLQKK010000006.1 tpg gene 4061 5287 . - . ID=gene-ACYKJH_000544;Name=ACYKJH_000544;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000544 DBLQKK010000006.1 Protein Homology CDS 4061 5287 . - 0 ID=cds-HIH2188691.1;Parent=gene-ACYKJH_000544;Dbxref=NCBI_GP:HIH2188691.1;Name=HIH2188691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343867.1;locus_tag=ACYKJH_000544;product=hypothetical protein;protein_id=HIH2188691.1;transl_table=11 DBLQKK010000006.1 tpg gene 5415 5999 . + . ID=gene-ACYKJH_000545;Name=ACYKJH_000545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000545 DBLQKK010000006.1 Protein Homology CDS 5415 5999 . + 0 ID=cds-HIH2188692.1;Parent=gene-ACYKJH_000545;Dbxref=NCBI_GP:HIH2188692.1;Name=HIH2188692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343866.1;locus_tag=ACYKJH_000545;product=IMPACT family protein;protein_id=HIH2188692.1;transl_table=11 DBLQKK010000006.1 tpg gene 6043 6426 . - . ID=gene-ACYKJH_000546;Name=ACYKJH_000546;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000546 DBLQKK010000006.1 Protein Homology CDS 6043 6426 . - 0 ID=cds-HIH2188693.1;Parent=gene-ACYKJH_000546;Dbxref=NCBI_GP:HIH2188693.1;Name=HIH2188693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343865.1;locus_tag=ACYKJH_000546;product=hypothetical protein;protein_id=HIH2188693.1;transl_table=11 DBLQKK010000006.1 tpg gene 6503 6838 . - . ID=gene-ACYKJH_000547;Name=ACYKJH_000547;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000547 DBLQKK010000006.1 Protein Homology CDS 6503 6838 . - 0 ID=cds-HIH2188694.1;Parent=gene-ACYKJH_000547;Dbxref=NCBI_GP:HIH2188694.1;Name=HIH2188694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343864.1;locus_tag=ACYKJH_000547;product=hypothetical protein;protein_id=HIH2188694.1;transl_table=11 DBLQKK010000006.1 tpg gene 6828 8405 . - . ID=gene-ACYKJH_000548;Name=ACYKJH_000548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000548 DBLQKK010000006.1 Protein Homology CDS 6828 8405 . - 0 ID=cds-HIH2188695.1;Parent=gene-ACYKJH_000548;Dbxref=NCBI_GP:HIH2188695.1;Name=HIH2188695.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343863.1;locus_tag=ACYKJH_000548;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=HIH2188695.1;transl_table=11 DBLQKK010000006.1 tpg gene 8535 8732 . - . ID=gene-ACYKJH_000549;Name=ACYKJH_000549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000549 DBLQKK010000006.1 GeneMarkS-2+ CDS 8535 8732 . - 0 ID=cds-HIH2188696.1;Parent=gene-ACYKJH_000549;Dbxref=NCBI_GP:HIH2188696.1;Name=HIH2188696.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_000549;product=hypothetical protein;protein_id=HIH2188696.1;transl_table=11 DBLQKK010000006.1 tpg gene 8747 8950 . - . ID=gene-ACYKJH_000550;Name=ACYKJH_000550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000550 DBLQKK010000006.1 GeneMarkS-2+ CDS 8747 8950 . - 0 ID=cds-HIH2188697.1;Parent=gene-ACYKJH_000550;Dbxref=NCBI_GP:HIH2188697.1;Name=HIH2188697.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_000550;product=hypothetical protein;protein_id=HIH2188697.1;transl_table=11 DBLQKK010000006.1 tpg pseudogene 8963 9596 . - . ID=gene-ACYKJH_000551;Name=ACYKJH_000551;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_000551;pseudo=true DBLQKK010000006.1 Protein Homology CDS 8963 9596 . - 0 ID=cds-ACYKJH_000551;Parent=gene-ACYKJH_000551;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343861.1;locus_tag=ACYKJH_000551;product=toxin-antitoxin system YwqK family antitoxin;pseudo=true;transl_table=11 DBLQKK010000006.1 tpg gene 9571 9831 . - . ID=gene-ACYKJH_000552;Name=ACYKJH_000552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000552 DBLQKK010000006.1 Protein Homology CDS 9571 9831 . - 0 ID=cds-HIH2188698.1;Parent=gene-ACYKJH_000552;Dbxref=NCBI_GP:HIH2188698.1;Name=HIH2188698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002872777.1;locus_tag=ACYKJH_000552;product=superinfection immunity protein;protein_id=HIH2188698.1;transl_table=11 DBLQKK010000006.1 tpg gene 10000 10209 . + . ID=gene-ACYKJH_000553;Name=ACYKJH_000553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000553 DBLQKK010000006.1 Protein Homology CDS 10000 10209 . + 0 ID=cds-HIH2188699.1;Parent=gene-ACYKJH_000553;Dbxref=NCBI_GP:HIH2188699.1;Name=HIH2188699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343859.1;locus_tag=ACYKJH_000553;product=transcriptional regulator;protein_id=HIH2188699.1;transl_table=11 DBLQKK010000006.1 tpg gene 10270 11226 . + . ID=gene-ACYKJH_000554;Name=ACYKJH_000554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000554 DBLQKK010000006.1 Protein Homology CDS 10270 11226 . + 0 ID=cds-HIH2188700.1;Parent=gene-ACYKJH_000554;Dbxref=NCBI_GP:HIH2188700.1;Name=HIH2188700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343858.1;locus_tag=ACYKJH_000554;product=hypothetical protein;protein_id=HIH2188700.1;transl_table=11 DBLQKK010000006.1 tpg gene 11231 11803 . - . ID=gene-ACYKJH_000555;Name=ACYKJH_000555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000555 DBLQKK010000006.1 Protein Homology CDS 11231 11803 . - 0 ID=cds-HIH2188701.1;Parent=gene-ACYKJH_000555;Dbxref=NCBI_GP:HIH2188701.1;Name=HIH2188701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343857.1;locus_tag=ACYKJH_000555;product=YceI family protein;protein_id=HIH2188701.1;transl_table=11 DBLQKK010000006.1 tpg gene 11877 12239 . - . ID=gene-ACYKJH_000556;Name=ACYKJH_000556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000556 DBLQKK010000006.1 Protein Homology CDS 11877 12239 . - 0 ID=cds-HIH2188702.1;Parent=gene-ACYKJH_000556;Dbxref=NCBI_GP:HIH2188702.1;Name=HIH2188702.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343856.1;locus_tag=ACYKJH_000556;product=HIT family protein;protein_id=HIH2188702.1;transl_table=11 DBLQKK010000006.1 tpg gene 12347 13051 . + . ID=gene-ACYKJH_000557;Name=ACYKJH_000557;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000557 DBLQKK010000006.1 Protein Homology CDS 12347 13051 . + 0 ID=cds-HIH2188703.1;Parent=gene-ACYKJH_000557;Dbxref=NCBI_GP:HIH2188703.1;Name=HIH2188703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343855.1;locus_tag=ACYKJH_000557;product=putative metalloprotease CJM1_0395 family protein;protein_id=HIH2188703.1;transl_table=11 DBLQKK010000006.1 tpg pseudogene 13157 13372 . - . ID=gene-ACYKJH_000558;Name=ACYKJH_000558;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_000558;pseudo=true DBLQKK010000006.1 Protein Homology CDS 13157 13372 . - 0 ID=cds-ACYKJH_000558;Parent=gene-ACYKJH_000558;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002867793.1;locus_tag=ACYKJH_000558;product=hypothetical protein;pseudo=true;transl_table=11 DBLQKK010000006.1 tpg gene 13678 13851 . - . ID=gene-ACYKJH_000559;Name=ACYKJH_000559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000559 DBLQKK010000006.1 GeneMarkS-2+ CDS 13678 13851 . - 0 ID=cds-HIH2188704.1;Parent=gene-ACYKJH_000559;Dbxref=NCBI_GP:HIH2188704.1;Name=HIH2188704.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_000559;product=hypothetical protein;protein_id=HIH2188704.1;transl_table=11 DBLQKK010000006.1 tpg gene 14057 15778 . - . ID=gene-ACYKJH_000560;Name=ACYKJH_000560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000560 DBLQKK010000006.1 Protein Homology CDS 14057 15778 . - 0 ID=cds-HIH2188705.1;Parent=gene-ACYKJH_000560;Dbxref=NCBI_GP:HIH2188705.1;Name=HIH2188705.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343852.1;locus_tag=ACYKJH_000560;product=GMC family oxidoreductase;protein_id=HIH2188705.1;transl_table=11 DBLQKK010000006.1 tpg gene 15780 16508 . - . ID=gene-ACYKJH_000561;Name=ACYKJH_000561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000561 DBLQKK010000006.1 Protein Homology CDS 15780 16508 . - 0 ID=cds-HIH2188706.1;Parent=gene-ACYKJH_000561;Dbxref=NCBI_GP:HIH2188706.1;Name=HIH2188706.1;Ontology_term=GO:0008873,GO:0008875;gbkey=CDS;go_function=gluconate 2-dehydrogenase activity|0008873||IEA,gluconate dehydrogenase activity|0008875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343851.1;locus_tag=ACYKJH_000561;product=gluconate 2-dehydrogenase subunit 3 family protein;protein_id=HIH2188706.1;transl_table=11 DBLQKK010000006.1 tpg gene 16644 17348 . - . ID=gene-ACYKJH_000562;Name=ACYKJH_000562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000562 DBLQKK010000006.1 Protein Homology CDS 16644 17348 . - 0 ID=cds-HIH2188707.1;Parent=gene-ACYKJH_000562;Dbxref=NCBI_GP:HIH2188707.1;Name=HIH2188707.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343850.1;locus_tag=ACYKJH_000562;product=tetratricopeptide repeat protein;protein_id=HIH2188707.1;transl_table=11 DBLQKK010000006.1 tpg gene 17348 19177 . - . ID=gene-ACYKJH_000563;Name=ACYKJH_000563;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000563 DBLQKK010000006.1 Protein Homology CDS 17348 19177 . - 0 ID=cds-HIH2188708.1;Parent=gene-ACYKJH_000563;Dbxref=NCBI_GP:HIH2188708.1;Name=HIH2188708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343849.1;locus_tag=ACYKJH_000563;product=dynamin family protein;protein_id=HIH2188708.1;transl_table=11 DBLQKK010000006.1 tpg gene 19167 21353 . - . ID=gene-ACYKJH_000564;Name=ACYKJH_000564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000564 DBLQKK010000006.1 Protein Homology CDS 19167 21353 . - 0 ID=cds-HIH2188709.1;Parent=gene-ACYKJH_000564;Dbxref=NCBI_GP:HIH2188709.1;Name=HIH2188709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343848.1;locus_tag=ACYKJH_000564;product=dynamin family protein;protein_id=HIH2188709.1;transl_table=11 DBLQKK010000006.1 tpg gene 21381 22106 . - . ID=gene-ACYKJH_000565;Name=ACYKJH_000565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000565 DBLQKK010000006.1 Protein Homology CDS 21381 22106 . - 0 ID=cds-HIH2188710.1;Parent=gene-ACYKJH_000565;Dbxref=NCBI_GP:HIH2188710.1;Name=HIH2188710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343847.1;locus_tag=ACYKJH_000565;product=fumarate reductase iron-sulfur subunit;protein_id=HIH2188710.1;transl_table=11 DBLQKK010000006.1 tpg gene 22099 24090 . - . ID=gene-ACYKJH_000566;Name=ACYKJH_000566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000566 DBLQKK010000006.1 Protein Homology CDS 22099 24090 . - 0 ID=cds-HIH2188711.1;Parent=gene-ACYKJH_000566;Dbxref=NCBI_GP:HIH2188711.1;Name=HIH2188711.1;Ontology_term=GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343846.1;locus_tag=ACYKJH_000566;product=fumarate reductase flavoprotein subunit;protein_id=HIH2188711.1;transl_table=11 DBLQKK010000006.1 tpg gene 24074 24856 . - . ID=gene-ACYKJH_000567;Name=ACYKJH_000567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000567 DBLQKK010000006.1 Protein Homology CDS 24074 24856 . - 0 ID=cds-HIH2188712.1;Parent=gene-ACYKJH_000567;Dbxref=NCBI_GP:HIH2188712.1;Name=HIH2188712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343845.1;locus_tag=ACYKJH_000567;product=fumarate reductase cytochrome b subunit;protein_id=HIH2188712.1;transl_table=11 DBLQKK010000006.1 tpg gene 24925 25740 . - . ID=gene-ACYKJH_000568;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=ACYKJH_000568 DBLQKK010000006.1 Protein Homology CDS 24925 25740 . - 0 ID=cds-HIH2188713.1;Parent=gene-ACYKJH_000568;Dbxref=NCBI_GP:HIH2188713.1;Name=HIH2188713.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343844.1;locus_tag=ACYKJH_000568;product=prolipoprotein diacylglyceryl transferase;protein_id=HIH2188713.1;transl_table=11 DBLQKK010000006.1 tpg gene 25830 26729 . + . ID=gene-ACYKJH_000569;Name=ACYKJH_000569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000569 DBLQKK010000006.1 Protein Homology CDS 25830 26729 . + 0 ID=cds-HIH2188714.1;Parent=gene-ACYKJH_000569;Dbxref=NCBI_GP:HIH2188714.1;Name=HIH2188714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343843.1;locus_tag=ACYKJH_000569;product=membrane lipoprotein lipid attachment site-containing protein;protein_id=HIH2188714.1;transl_table=11 DBLQKK010000006.1 tpg gene 26803 27591 . - . ID=gene-ACYKJH_000570;Name=ACYKJH_000570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000570 DBLQKK010000006.1 Protein Homology CDS 26803 27591 . - 0 ID=cds-HIH2188715.1;Parent=gene-ACYKJH_000570;Dbxref=NCBI_GP:HIH2188715.1;Name=HIH2188715.1;Ontology_term=GO:0019632,GO:0004764,GO:0050661;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA,NADP binding|0050661||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343842.1;locus_tag=ACYKJH_000570;product=shikimate dehydrogenase;protein_id=HIH2188715.1;transl_table=11 DBLQKK010000006.1 tpg gene 27588 28424 . - . ID=gene-ACYKJH_000571;Name=ACYKJH_000571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000571 DBLQKK010000006.1 Protein Homology CDS 27588 28424 . - 0 ID=cds-HIH2188716.1;Parent=gene-ACYKJH_000571;Dbxref=NCBI_GP:HIH2188716.1;Name=HIH2188716.1;Ontology_term=GO:0042834,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343841.1;locus_tag=ACYKJH_000571;product=SPOR domain-containing protein;protein_id=HIH2188716.1;transl_table=11 DBLQKK010000006.1 tpg gene 28438 28983 . - . ID=gene-ACYKJH_000572;Name=ACYKJH_000572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000572 DBLQKK010000006.1 Protein Homology CDS 28438 28983 . - 0 ID=cds-HIH2188717.1;Parent=gene-ACYKJH_000572;Dbxref=NCBI_GP:HIH2188717.1;Name=HIH2188717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343840.1;locus_tag=ACYKJH_000572;product=DUF1882 domain-containing protein;protein_id=HIH2188717.1;transl_table=11 DBLQKK010000006.1 tpg gene 28980 30224 . - . ID=gene-ACYKJH_000573;Name=ACYKJH_000573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000573 DBLQKK010000006.1 Protein Homology CDS 28980 30224 . - 0 ID=cds-HIH2188718.1;Parent=gene-ACYKJH_000573;Dbxref=NCBI_GP:HIH2188718.1;Name=HIH2188718.1;Ontology_term=GO:0019264,GO:0004372,GO:0030170;gbkey=CDS;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343839.1;locus_tag=ACYKJH_000573;product=serine hydroxymethyltransferase;protein_id=HIH2188718.1;transl_table=11 DBLQKK010000006.1 tpg gene 30221 31726 . - . ID=gene-ACYKJH_000574;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=ACYKJH_000574 DBLQKK010000006.1 Protein Homology CDS 30221 31726 . - 0 ID=cds-HIH2188719.1;Parent=gene-ACYKJH_000574;Dbxref=NCBI_GP:HIH2188719.1;Name=HIH2188719.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343838.1;locus_tag=ACYKJH_000574;product=lysine--tRNA ligase;protein_id=HIH2188719.1;transl_table=11 DBLQKK010000006.1 tpg gene 31727 32200 . - . ID=gene-ACYKJH_000575;Name=ACYKJH_000575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000575 DBLQKK010000006.1 Protein Homology CDS 31727 32200 . - 0 ID=cds-HIH2188720.1;Parent=gene-ACYKJH_000575;Dbxref=NCBI_GP:HIH2188720.1;Name=HIH2188720.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343837.1;locus_tag=ACYKJH_000575;product=Fur family transcriptional regulator;protein_id=HIH2188720.1;transl_table=11 DBLQKK010000006.1 tpg gene 32202 32765 . - . ID=gene-ACYKJH_000576;Name=ACYKJH_000576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000576 DBLQKK010000006.1 Protein Homology CDS 32202 32765 . - 0 ID=cds-HIH2188721.1;Parent=gene-ACYKJH_000576;Dbxref=NCBI_GP:HIH2188721.1;Name=HIH2188721.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343836.1;locus_tag=ACYKJH_000576;product=CvpA family protein;protein_id=HIH2188721.1;transl_table=11 DBLQKK010000006.1 tpg gene 32833 33117 . - . ID=gene-ACYKJH_000577;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=ACYKJH_000577 DBLQKK010000006.1 Protein Homology CDS 32833 33117 . - 0 ID=cds-HIH2188722.1;Parent=gene-ACYKJH_000577;Dbxref=NCBI_GP:HIH2188722.1;Name=HIH2188722.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343835.1;locus_tag=ACYKJH_000577;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=HIH2188722.1;transl_table=11 DBLQKK010000006.1 tpg gene 33261 33839 . + . ID=gene-ACYKJH_000578;Name=ACYKJH_000578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000578 DBLQKK010000006.1 Protein Homology CDS 33261 33839 . + 0 ID=cds-HIH2188723.1;Parent=gene-ACYKJH_000578;Dbxref=NCBI_GP:HIH2188723.1;Name=HIH2188723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343834.1;locus_tag=ACYKJH_000578;product=hypothetical protein;protein_id=HIH2188723.1;transl_table=11 DBLQKK010000006.1 tpg gene 33836 34834 . + . ID=gene-ACYKJH_000579;Name=ACYKJH_000579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000579 DBLQKK010000006.1 Protein Homology CDS 33836 34834 . + 0 ID=cds-HIH2188724.1;Parent=gene-ACYKJH_000579;Dbxref=NCBI_GP:HIH2188724.1;Name=HIH2188724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343833.1;locus_tag=ACYKJH_000579;product=hypothetical protein;protein_id=HIH2188724.1;transl_table=11 DBLQKK010000006.1 tpg gene 34831 35121 . + . ID=gene-ACYKJH_000580;Name=ACYKJH_000580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000580 DBLQKK010000006.1 Protein Homology CDS 34831 35121 . + 0 ID=cds-HIH2188725.1;Parent=gene-ACYKJH_000580;Dbxref=NCBI_GP:HIH2188725.1;Name=HIH2188725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343832.1;locus_tag=ACYKJH_000580;product=tram-like protein;protein_id=HIH2188725.1;transl_table=11 DBLQKK010000006.1 tpg gene 35108 35737 . + . ID=gene-ACYKJH_000581;Name=ACYKJH_000581;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000581 DBLQKK010000006.1 Protein Homology CDS 35108 35737 . + 0 ID=cds-HIH2188726.1;Parent=gene-ACYKJH_000581;Dbxref=NCBI_GP:HIH2188726.1;Name=HIH2188726.1;Ontology_term=GO:0004594;gbkey=CDS;go_function=pantothenate kinase activity|0004594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343831.1;locus_tag=ACYKJH_000581;product=type III pantothenate kinase;protein_id=HIH2188726.1;transl_table=11 DBLQKK010000006.1 tpg gene 35855 37201 . + . ID=gene-ACYKJH_000582;Name=ACYKJH_000582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000582 DBLQKK010000006.1 Protein Homology CDS 35855 37201 . + 0 ID=cds-HIH2188727.1;Parent=gene-ACYKJH_000582;Dbxref=NCBI_GP:HIH2188727.1;Name=HIH2188727.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343830.1;locus_tag=ACYKJH_000582;product=FAD-dependent oxidoreductase;protein_id=HIH2188727.1;transl_table=11 DBLQKK010000006.1 tpg gene 37250 38692 . + . ID=gene-ACYKJH_000583;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=ACYKJH_000583 DBLQKK010000006.1 Protein Homology CDS 37250 38692 . + 0 ID=cds-HIH2188728.1;Parent=gene-ACYKJH_000583;Dbxref=NCBI_GP:HIH2188728.1;Name=HIH2188728.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343829.1;locus_tag=ACYKJH_000583;product=pyruvate kinase;protein_id=HIH2188728.1;transl_table=11 DBLQKK010000006.1 tpg gene 38790 39425 . + . ID=gene-ACYKJH_000584;Name=ACYKJH_000584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000584 DBLQKK010000006.1 Protein Homology CDS 38790 39425 . + 0 ID=cds-HIH2188729.1;Parent=gene-ACYKJH_000584;Dbxref=NCBI_GP:HIH2188729.1;Name=HIH2188729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343828.1;locus_tag=ACYKJH_000584;product=hypothetical protein;protein_id=HIH2188729.1;transl_table=11 DBLQKK010000006.1 tpg gene 39456 41918 . - . ID=gene-ACYKJH_000585;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=ACYKJH_000585 DBLQKK010000006.1 Protein Homology CDS 39456 41918 . - 0 ID=cds-HIH2188730.1;Parent=gene-ACYKJH_000585;Dbxref=NCBI_GP:HIH2188730.1;Name=HIH2188730.1;gbkey=CDS;gene=pflB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343827.1;locus_tag=ACYKJH_000585;product=motility protein PflB;protein_id=HIH2188730.1;transl_table=11 DBLQKK010000006.1 tpg gene 41928 43163 . - . ID=gene-ACYKJH_000586;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=ACYKJH_000586 DBLQKK010000006.1 Protein Homology CDS 41928 43163 . - 0 ID=cds-HIH2188731.1;Parent=gene-ACYKJH_000586;Dbxref=NCBI_GP:HIH2188731.1;Name=HIH2188731.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343826.1;locus_tag=ACYKJH_000586;product=serine--tRNA ligase;protein_id=HIH2188731.1;transl_table=11 DBLQKK010000006.1 tpg gene 43174 44133 . - . ID=gene-ACYKJH_000587;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=ACYKJH_000587 DBLQKK010000006.1 Protein Homology CDS 43174 44133 . - 0 ID=cds-HIH2188732.1;Parent=gene-ACYKJH_000587;Dbxref=NCBI_GP:HIH2188732.1;Name=HIH2188732.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343825.1;locus_tag=ACYKJH_000587;product=tryptophan--tRNA ligase;protein_id=HIH2188732.1;transl_table=11 DBLQKK010000006.1 tpg gene 44130 44627 . - . ID=gene-ACYKJH_000588;Name=ACYKJH_000588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000588 DBLQKK010000006.1 Protein Homology CDS 44130 44627 . - 0 ID=cds-HIH2188733.1;Parent=gene-ACYKJH_000588;Dbxref=NCBI_GP:HIH2188733.1;Name=HIH2188733.1;Ontology_term=GO:0008652,GO:0009073,GO:0000287,GO:0004765,GO:0005524;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,shikimate kinase activity|0004765||IEA,ATP binding|0005524||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343824.1;locus_tag=ACYKJH_000588;product=shikimate kinase;protein_id=HIH2188733.1;transl_table=11 DBLQKK010000006.1 tpg gene 44614 45996 . - . ID=gene-ACYKJH_000589;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=ACYKJH_000589 DBLQKK010000006.1 Protein Homology CDS 44614 45996 . - 0 ID=cds-HIH2188734.1;Parent=gene-ACYKJH_000589;Dbxref=NCBI_GP:HIH2188734.1;Name=HIH2188734.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343823.1;locus_tag=ACYKJH_000589;product=ribosome biogenesis GTPase Der;protein_id=HIH2188734.1;transl_table=11 DBLQKK010000006.1 tpg gene 46097 47029 . + . ID=gene-ACYKJH_000590;Name=ACYKJH_000590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000590 DBLQKK010000006.1 Protein Homology CDS 46097 47029 . + 0 ID=cds-HIH2188735.1;Parent=gene-ACYKJH_000590;Dbxref=NCBI_GP:HIH2188735.1;Name=HIH2188735.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343822.1;locus_tag=ACYKJH_000590;product=DMT family transporter;protein_id=HIH2188735.1;transl_table=11 DBLQKK010000006.1 tpg gene 47026 47841 . + . ID=gene-ACYKJH_000591;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=ACYKJH_000591 DBLQKK010000006.1 Protein Homology CDS 47026 47841 . + 0 ID=cds-HIH2188736.1;Parent=gene-ACYKJH_000591;Dbxref=NCBI_GP:HIH2188736.1;Name=HIH2188736.1;Ontology_term=GO:0009058,GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002862627.1;locus_tag=ACYKJH_000591;product=3-deoxy-8-phosphooctulonate synthase;protein_id=HIH2188736.1;transl_table=11 DBLQKK010000006.1 tpg gene 47838 48302 . + . ID=gene-ACYKJH_000592;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=ACYKJH_000592 DBLQKK010000006.1 Protein Homology CDS 47838 48302 . + 0 ID=cds-HIH2188737.1;Parent=gene-ACYKJH_000592;Dbxref=NCBI_GP:HIH2188737.1;Name=HIH2188737.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343820.1;locus_tag=ACYKJH_000592;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=HIH2188737.1;transl_table=11 DBLQKK010000006.1 tpg gene 48302 48700 . + . ID=gene-ACYKJH_000593;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=ACYKJH_000593 DBLQKK010000006.1 Protein Homology CDS 48302 48700 . + 0 ID=cds-HIH2188738.1;Parent=gene-ACYKJH_000593;Dbxref=NCBI_GP:HIH2188738.1;Name=HIH2188738.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343819.1;locus_tag=ACYKJH_000593;product=transcription antitermination factor NusB;protein_id=HIH2188738.1;transl_table=11 DBLQKK010000006.1 tpg gene 48697 49536 . + . ID=gene-ACYKJH_000594;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=ACYKJH_000594 DBLQKK010000006.1 Protein Homology CDS 48697 49536 . + 0 ID=cds-HIH2188739.1;Parent=gene-ACYKJH_000594;Dbxref=NCBI_GP:HIH2188739.1;Name=HIH2188739.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343818.1;locus_tag=ACYKJH_000594;product=orotidine-5'-phosphate decarboxylase;protein_id=HIH2188739.1;transl_table=11 DBLQKK010000006.1 tpg gene 49533 50318 . + . ID=gene-ACYKJH_000595;Name=ACYKJH_000595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000595 DBLQKK010000006.1 Protein Homology CDS 49533 50318 . + 0 ID=cds-HIH2188740.1;Parent=gene-ACYKJH_000595;Dbxref=NCBI_GP:HIH2188740.1;Name=HIH2188740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343817.1;locus_tag=ACYKJH_000595;product=hypothetical protein;protein_id=HIH2188740.1;transl_table=11 DBLQKK010000006.1 tpg gene 50374 51267 . + . ID=gene-ACYKJH_000596;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=ACYKJH_000596 DBLQKK010000006.1 Protein Homology CDS 50374 51267 . + 0 ID=cds-HIH2188741.1;Parent=gene-ACYKJH_000596;Dbxref=NCBI_GP:HIH2188741.1;Name=HIH2188741.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343816.1;locus_tag=ACYKJH_000596;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=HIH2188741.1;transl_table=11 DBLQKK010000006.1 tpg gene 51267 51839 . + . ID=gene-ACYKJH_000597;Name=ACYKJH_000597;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000597 DBLQKK010000006.1 Protein Homology CDS 51267 51839 . + 0 ID=cds-HIH2188742.1;Parent=gene-ACYKJH_000597;Dbxref=NCBI_GP:HIH2188742.1;Name=HIH2188742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002857273.1;locus_tag=ACYKJH_000597;product=ferric reductase-like transmembrane domain-containing protein;protein_id=HIH2188742.1;transl_table=11 DBLQKK010000006.1 tpg gene 51804 53516 . - . ID=gene-ACYKJH_000598;Name=ACYKJH_000598;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000598 DBLQKK010000006.1 Protein Homology CDS 51804 53516 . - 0 ID=cds-HIH2188743.1;Parent=gene-ACYKJH_000598;Dbxref=NCBI_GP:HIH2188743.1;Name=HIH2188743.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343814.1;locus_tag=ACYKJH_000598;product=AAA family ATPase;protein_id=HIH2188743.1;transl_table=11 DBLQKK010000006.1 tpg gene 53516 54340 . - . ID=gene-ACYKJH_000599;Name=ACYKJH_000599;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000599 DBLQKK010000006.1 Protein Homology CDS 53516 54340 . - 0 ID=cds-HIH2188744.1;Parent=gene-ACYKJH_000599;Dbxref=NCBI_GP:HIH2188744.1;Name=HIH2188744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343813.1;locus_tag=ACYKJH_000599;product=hypothetical protein;protein_id=HIH2188744.1;transl_table=11 DBLQKK010000006.1 tpg gene 54351 54827 . - . ID=gene-ACYKJH_000600;Name=ACYKJH_000600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000600 DBLQKK010000006.1 Protein Homology CDS 54351 54827 . - 0 ID=cds-HIH2188745.1;Parent=gene-ACYKJH_000600;Dbxref=NCBI_GP:HIH2188745.1;Name=HIH2188745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343812.1;locus_tag=ACYKJH_000600;product=hypothetical protein;protein_id=HIH2188745.1;transl_table=11 DBLQKK010000006.1 tpg gene 54836 55327 . - . ID=gene-ACYKJH_000601;Name=ACYKJH_000601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000601 DBLQKK010000006.1 Protein Homology CDS 54836 55327 . - 0 ID=cds-HIH2188746.1;Parent=gene-ACYKJH_000601;Dbxref=NCBI_GP:HIH2188746.1;Name=HIH2188746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343811.1;locus_tag=ACYKJH_000601;product=YajQ family cyclic di-GMP-binding protein;protein_id=HIH2188746.1;transl_table=11 DBLQKK010000006.1 tpg gene 55317 56252 . - . ID=gene-ACYKJH_000602;Name=ACYKJH_000602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000602 DBLQKK010000006.1 Protein Homology CDS 55317 56252 . - 0 ID=cds-HIH2188747.1;Parent=gene-ACYKJH_000602;Dbxref=NCBI_GP:HIH2188747.1;Name=HIH2188747.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343810.1;locus_tag=ACYKJH_000602;product=D-2-hydroxyacid dehydrogenase;protein_id=HIH2188747.1;transl_table=11 DBLQKK010000006.1 tpg gene 56255 57424 . - . ID=gene-ACYKJH_000603;Name=ACYKJH_000603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000603 DBLQKK010000006.1 Protein Homology CDS 56255 57424 . - 0 ID=cds-HIH2188748.1;Parent=gene-ACYKJH_000603;Dbxref=NCBI_GP:HIH2188748.1;Name=HIH2188748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343809.1;locus_tag=ACYKJH_000603;product=glutathionylspermidine synthase family protein;protein_id=HIH2188748.1;transl_table=11 DBLQKK010000006.1 tpg gene 57434 58039 . - . ID=gene-ACYKJH_000604;Name=ACYKJH_000604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000604 DBLQKK010000006.1 Protein Homology CDS 57434 58039 . - 0 ID=cds-HIH2188749.1;Parent=gene-ACYKJH_000604;Dbxref=NCBI_GP:HIH2188749.1;Name=HIH2188749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343808.1;locus_tag=ACYKJH_000604;product=UPF0323 family lipoprotein;protein_id=HIH2188749.1;transl_table=11 DBLQKK010000006.1 tpg gene 58159 58371 . - . ID=gene-ACYKJH_000605;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=ACYKJH_000605 DBLQKK010000006.1 Protein Homology CDS 58159 58371 . - 0 ID=cds-HIH2188750.1;Parent=gene-ACYKJH_000605;Dbxref=NCBI_GP:HIH2188750.1;Name=HIH2188750.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343807.1;locus_tag=ACYKJH_000605;product=30S ribosomal protein S21;protein_id=HIH2188750.1;transl_table=11 DBLQKK010000006.1 tpg gene 58531 59907 . + . ID=gene-ACYKJH_000606;Name=ccoG;gbkey=Gene;gene=ccoG;gene_biotype=protein_coding;locus_tag=ACYKJH_000606 DBLQKK010000006.1 Protein Homology CDS 58531 59907 . + 0 ID=cds-HIH2188751.1;Parent=gene-ACYKJH_000606;Dbxref=NCBI_GP:HIH2188751.1;Name=HIH2188751.1;Ontology_term=GO:0008535,GO:0016020;gbkey=CDS;gene=ccoG;go_component=membrane|0016020||IEA;go_process=respiratory chain complex IV assembly|0008535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343806.1;locus_tag=ACYKJH_000606;product=cytochrome c oxidase accessory protein CcoG;protein_id=HIH2188751.1;transl_table=11 DBLQKK010000006.1 tpg gene 59894 60526 . + . ID=gene-ACYKJH_000607;Name=cmeR;gbkey=Gene;gene=cmeR;gene_biotype=protein_coding;locus_tag=ACYKJH_000607 DBLQKK010000006.1 Protein Homology CDS 59894 60526 . + 0 ID=cds-HIH2188752.1;Parent=gene-ACYKJH_000607;Dbxref=NCBI_GP:HIH2188752.1;Name=HIH2188752.1;gbkey=CDS;gene=cmeR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343805.1;locus_tag=ACYKJH_000607;product=multidrug efflux system transcriptional regulator CmeR;protein_id=HIH2188752.1;transl_table=11 DBLQKK010000006.1 tpg gene 60620 61723 . + . ID=gene-ACYKJH_000608;Name=cmeA;gbkey=Gene;gene=cmeA;gene_biotype=protein_coding;locus_tag=ACYKJH_000608 DBLQKK010000006.1 Protein Homology CDS 60620 61723 . + 0 ID=cds-HIH2188753.1;Parent=gene-ACYKJH_000608;Dbxref=NCBI_GP:HIH2188753.1;Name=HIH2188753.1;gbkey=CDS;gene=cmeA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343804.1;locus_tag=ACYKJH_000608;product=multidrug efflux RND transporter periplasmic adaptor subunit CmeA;protein_id=HIH2188753.1;transl_table=11 DBLQKK010000006.1 tpg gene 61723 64845 . + . ID=gene-ACYKJH_000609;Name=cmeB;gbkey=Gene;gene=cmeB;gene_biotype=protein_coding;locus_tag=ACYKJH_000609 DBLQKK010000006.1 Protein Homology CDS 61723 64845 . + 0 ID=cds-HIH2188754.1;Parent=gene-ACYKJH_000609;Dbxref=NCBI_GP:HIH2188754.1;Name=HIH2188754.1;gbkey=CDS;gene=cmeB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343803.1;locus_tag=ACYKJH_000609;product=multidrug efflux RND transporter permease subunit CmeB;protein_id=HIH2188754.1;transl_table=11 DBLQKK010000006.1 tpg pseudogene 64838 66315 . + . ID=gene-ACYKJH_000610;Name=cmeC;gbkey=Gene;gene=cmeC;gene_biotype=pseudogene;locus_tag=ACYKJH_000610;pseudo=true DBLQKK010000006.1 Protein Homology CDS 64838 66315 . + 0 ID=cds-ACYKJH_000610;Parent=gene-ACYKJH_000610;Note=frameshifted;gbkey=CDS;gene=cmeC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343802.1;locus_tag=ACYKJH_000610;product=multidrug efflux transporter outer membrane subunit CmeC;pseudo=true;transl_table=11 DBLQKK010000006.1 tpg gene 66338 66589 . - . ID=gene-ACYKJH_000611;Name=cmeU;gbkey=Gene;gene=cmeU;gene_biotype=protein_coding;locus_tag=ACYKJH_000611 DBLQKK010000006.1 Protein Homology CDS 66338 66589 . - 0 ID=cds-HIH2188755.1;Parent=gene-ACYKJH_000611;Dbxref=NCBI_GP:HIH2188755.1;Name=HIH2188755.1;gbkey=CDS;gene=cmeU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343801.1;locus_tag=ACYKJH_000611;product=CmeU family protein;protein_id=HIH2188755.1;transl_table=11 DBLQKK010000006.1 tpg gene 66716 68062 . + . ID=gene-ACYKJH_000612;Name=ACYKJH_000612;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000612 DBLQKK010000006.1 Protein Homology CDS 66716 68062 . + 0 ID=cds-HIH2188756.1;Parent=gene-ACYKJH_000612;Dbxref=NCBI_GP:HIH2188756.1;Name=HIH2188756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343800.1;locus_tag=ACYKJH_000612;product=coproporphyrinogen III oxidase family protein;protein_id=HIH2188756.1;transl_table=11 DBLQKK010000006.1 tpg gene 68059 68511 . - . ID=gene-ACYKJH_000613;Name=hemJ;gbkey=Gene;gene=hemJ;gene_biotype=protein_coding;locus_tag=ACYKJH_000613 DBLQKK010000006.1 Protein Homology CDS 68059 68511 . - 0 ID=cds-HIH2188757.1;Parent=gene-ACYKJH_000613;Dbxref=NCBI_GP:HIH2188757.1;Name=HIH2188757.1;gbkey=CDS;gene=hemJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343799.1;locus_tag=ACYKJH_000613;product=protoporphyrinogen oxidase HemJ;protein_id=HIH2188757.1;transl_table=11 DBLQKK010000006.1 tpg gene 68495 68965 . - . ID=gene-ACYKJH_000614;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=ACYKJH_000614 DBLQKK010000006.1 Protein Homology CDS 68495 68965 . - 0 ID=cds-HIH2188758.1;Parent=gene-ACYKJH_000614;Dbxref=NCBI_GP:HIH2188758.1;Name=HIH2188758.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343798.1;locus_tag=ACYKJH_000614;product=signal peptidase II;protein_id=HIH2188758.1;transl_table=11 DBLQKK010000006.1 tpg gene 68958 70295 . - . ID=gene-ACYKJH_000615;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=ACYKJH_000615 DBLQKK010000006.1 Protein Homology CDS 68958 70295 . - 0 ID=cds-HIH2188759.1;Parent=gene-ACYKJH_000615;Dbxref=NCBI_GP:HIH2188759.1;Name=HIH2188759.1;Ontology_term=GO:0005975,GO:0009252,GO:0000287,GO:0008966;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA;go_process=carbohydrate metabolic process|0005975||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343797.1;locus_tag=ACYKJH_000615;product=phosphoglucosamine mutase;protein_id=HIH2188759.1;transl_table=11 DBLQKK010000006.1 tpg gene 70389 71414 . - . ID=gene-ACYKJH_000616;Name=ACYKJH_000616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000616 DBLQKK010000006.1 Protein Homology CDS 70389 71414 . - 0 ID=cds-HIH2188760.1;Parent=gene-ACYKJH_000616;Dbxref=NCBI_GP:HIH2188760.1;Name=HIH2188760.1;Ontology_term=GO:0004130,GO:0016491,GO:0020037;gbkey=CDS;go_function=cytochrome-c peroxidase activity|0004130||IEA,oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343796.1;locus_tag=ACYKJH_000616;product=cytochrome-c peroxidase;protein_id=HIH2188760.1;transl_table=11 ##sequence-region DBLQKK010000007.1 1 67608 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000007.1 tpg region 1 67608 . + . ID=DBLQKK010000007.1:1..67608;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000007.1 tpg gene 65 445 . + . ID=gene-ACYKJH_000617;Name=ACYKJH_000617;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000617 DBLQKK010000007.1 Protein Homology CDS 65 445 . + 0 ID=cds-HIH2188761.1;Parent=gene-ACYKJH_000617;Dbxref=NCBI_GP:HIH2188761.1;Name=HIH2188761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344337.1;locus_tag=ACYKJH_000617;product=hypothetical protein;protein_id=HIH2188761.1;transl_table=11 DBLQKK010000007.1 tpg gene 490 4002 . + . ID=gene-ACYKJH_000618;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=ACYKJH_000618 DBLQKK010000007.1 Protein Homology CDS 490 4002 . + 0 ID=cds-HIH2188762.1;Parent=gene-ACYKJH_000618;Dbxref=NCBI_GP:HIH2188762.1;Name=HIH2188762.1;gbkey=CDS;gene=aas;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344336.1;locus_tag=ACYKJH_000618;product=acyl-[ACP]--phospholipid O-acyltransferase;protein_id=HIH2188762.1;transl_table=11 DBLQKK010000007.1 tpg gene 4010 4921 . - . ID=gene-ACYKJH_000619;Name=ACYKJH_000619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000619 DBLQKK010000007.1 Protein Homology CDS 4010 4921 . - 0 ID=cds-HIH2188763.1;Parent=gene-ACYKJH_000619;Dbxref=NCBI_GP:HIH2188763.1;Name=HIH2188763.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344335.1;locus_tag=ACYKJH_000619;product=AEC family transporter;protein_id=HIH2188763.1;transl_table=11 DBLQKK010000007.1 tpg gene 5118 5203 . - . ID=gene-ACYKJH_000620;Name=ACYKJH_000620;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_000620 DBLQKK010000007.1 tRNAscan-SE tRNA 5118 5203 . - . ID=rna-ACYKJH_000620;Parent=gene-ACYKJH_000620;anticodon=(pos:complement(5167..5169));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000620;product=tRNA-Leu DBLQKK010000007.1 tRNAscan-SE exon 5118 5203 . - . ID=exon-ACYKJH_000620-1;Parent=rna-ACYKJH_000620;anticodon=(pos:complement(5167..5169));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000620;product=tRNA-Leu DBLQKK010000007.1 tpg gene 5238 5576 . - . ID=gene-ACYKJH_000621;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=ACYKJH_000621 DBLQKK010000007.1 Protein Homology CDS 5238 5576 . - 0 ID=cds-HIH2188764.1;Parent=gene-ACYKJH_000621;Dbxref=NCBI_GP:HIH2188764.1;Name=HIH2188764.1;gbkey=CDS;gene=atpE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344334.1;locus_tag=ACYKJH_000621;product=F0F1 ATP synthase subunit C;protein_id=HIH2188764.1;transl_table=11 DBLQKK010000007.1 tpg gene 5808 7142 . + . ID=gene-ACYKJH_000622;Name=ACYKJH_000622;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000622 DBLQKK010000007.1 Protein Homology CDS 5808 7142 . + 0 ID=cds-HIH2188765.1;Parent=gene-ACYKJH_000622;Dbxref=NCBI_GP:HIH2188765.1;Name=HIH2188765.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344333.1;locus_tag=ACYKJH_000622;product=sodium-dependent transporter;protein_id=HIH2188765.1;transl_table=11 DBLQKK010000007.1 tpg gene 7155 8495 . + . ID=gene-ACYKJH_000623;Name=ACYKJH_000623;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000623 DBLQKK010000007.1 Protein Homology CDS 7155 8495 . + 0 ID=cds-HIH2188766.1;Parent=gene-ACYKJH_000623;Dbxref=NCBI_GP:HIH2188766.1;Name=HIH2188766.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344332.1;locus_tag=ACYKJH_000623;product=sodium-dependent transporter;protein_id=HIH2188766.1;transl_table=11 DBLQKK010000007.1 tpg gene 8527 10326 . + . ID=gene-ACYKJH_000624;Name=pycB;gbkey=Gene;gene=pycB;gene_biotype=protein_coding;locus_tag=ACYKJH_000624 DBLQKK010000007.1 Protein Homology CDS 8527 10326 . + 0 ID=cds-HIH2188767.1;Parent=gene-ACYKJH_000624;Dbxref=NCBI_GP:HIH2188767.1;Name=HIH2188767.1;gbkey=CDS;gene=pycB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344331.1;locus_tag=ACYKJH_000624;product=biotin/lipoyl-containing protein;protein_id=HIH2188767.1;transl_table=11 DBLQKK010000007.1 tpg gene 10339 11913 . + . ID=gene-ACYKJH_000625;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=ACYKJH_000625 DBLQKK010000007.1 Protein Homology CDS 10339 11913 . + 0 ID=cds-HIH2188768.1;Parent=gene-ACYKJH_000625;Dbxref=NCBI_GP:HIH2188768.1;Name=HIH2188768.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344330.1;locus_tag=ACYKJH_000625;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=HIH2188768.1;transl_table=11 DBLQKK010000007.1 tpg gene 11923 13305 . + . ID=gene-ACYKJH_000626;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=ACYKJH_000626 DBLQKK010000007.1 Protein Homology CDS 11923 13305 . + 0 ID=cds-HIH2188769.1;Parent=gene-ACYKJH_000626;Dbxref=NCBI_GP:HIH2188769.1;Name=HIH2188769.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344329.1;locus_tag=ACYKJH_000626;product=argininosuccinate lyase;protein_id=HIH2188769.1;transl_table=11 DBLQKK010000007.1 tpg gene 13327 14430 . - . ID=gene-ACYKJH_000627;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=ACYKJH_000627 DBLQKK010000007.1 Protein Homology CDS 13327 14430 . - 0 ID=cds-HIH2188770.1;Parent=gene-ACYKJH_000627;Dbxref=NCBI_GP:HIH2188770.1;Name=HIH2188770.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344328.1;locus_tag=ACYKJH_000627;product=redox-regulated ATPase YchF;protein_id=HIH2188770.1;transl_table=11 DBLQKK010000007.1 tpg gene 14427 15878 . - . ID=gene-ACYKJH_000628;Name=ACYKJH_000628;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000628 DBLQKK010000007.1 Protein Homology CDS 14427 15878 . - 0 ID=cds-HIH2188771.1;Parent=gene-ACYKJH_000628;Dbxref=NCBI_GP:HIH2188771.1;Name=HIH2188771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344327.1;locus_tag=ACYKJH_000628;product=leucyl aminopeptidase;protein_id=HIH2188771.1;transl_table=11 DBLQKK010000007.1 tpg gene 15875 16471 . - . ID=gene-ACYKJH_000629;Name=ACYKJH_000629;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000629 DBLQKK010000007.1 Protein Homology CDS 15875 16471 . - 0 ID=cds-HIH2188772.1;Parent=gene-ACYKJH_000629;Dbxref=NCBI_GP:HIH2188772.1;Name=HIH2188772.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344326.1;locus_tag=ACYKJH_000629;product=DedA family protein;protein_id=HIH2188772.1;transl_table=11 DBLQKK010000007.1 tpg gene 16490 17038 . - . ID=gene-ACYKJH_000630;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=ACYKJH_000630 DBLQKK010000007.1 Protein Homology CDS 16490 17038 . - 0 ID=cds-HIH2188773.1;Parent=gene-ACYKJH_000630;Dbxref=NCBI_GP:HIH2188773.1;Name=HIH2188773.1;Ontology_term=GO:0006168,GO:0003999,GO:0005737;gbkey=CDS;gene=apt;go_component=cytoplasm|0005737||IEA;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344325.1;locus_tag=ACYKJH_000630;product=adenine phosphoribosyltransferase;protein_id=HIH2188773.1;transl_table=11 DBLQKK010000007.1 tpg gene 17035 17367 . - . ID=gene-ACYKJH_000631;Name=ACYKJH_000631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000631 DBLQKK010000007.1 Protein Homology CDS 17035 17367 . - 0 ID=cds-HIH2188774.1;Parent=gene-ACYKJH_000631;Dbxref=NCBI_GP:HIH2188774.1;Name=HIH2188774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344324.1;locus_tag=ACYKJH_000631;product=hypothetical protein;protein_id=HIH2188774.1;transl_table=11 DBLQKK010000007.1 tpg gene 17367 17804 . - . ID=gene-ACYKJH_000632;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=ACYKJH_000632 DBLQKK010000007.1 Protein Homology CDS 17367 17804 . - 0 ID=cds-HIH2188775.1;Parent=gene-ACYKJH_000632;Dbxref=NCBI_GP:HIH2188775.1;Name=HIH2188775.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiB;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344323.1;locus_tag=ACYKJH_000632;product=ribose 5-phosphate isomerase B;protein_id=HIH2188775.1;transl_table=11 DBLQKK010000007.1 tpg gene 17971 18525 . + . ID=gene-ACYKJH_000633;Name=cheB';gbkey=Gene;gene=cheB';gene_biotype=protein_coding;locus_tag=ACYKJH_000633 DBLQKK010000007.1 Protein Homology CDS 17971 18525 . + 0 ID=cds-HIH2188776.1;Parent=gene-ACYKJH_000633;Dbxref=NCBI_GP:HIH2188776.1;Name=HIH2188776.1;gbkey=CDS;gene=cheB';inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344322.1;locus_tag=ACYKJH_000633;product=CheB methylesterase domain-containing protein;protein_id=HIH2188776.1;transl_table=11 DBLQKK010000007.1 tpg gene 18541 19329 . + . ID=gene-ACYKJH_000634;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=ACYKJH_000634 DBLQKK010000007.1 Protein Homology CDS 18541 19329 . + 0 ID=cds-HIH2188777.1;Parent=gene-ACYKJH_000634;Dbxref=NCBI_GP:HIH2188777.1;Name=HIH2188777.1;gbkey=CDS;gene=cheR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344321.1;locus_tag=ACYKJH_000634;product=CheR family methyltransferase;protein_id=HIH2188777.1;transl_table=11 DBLQKK010000007.1 tpg gene 19465 20193 . + . ID=gene-ACYKJH_000635;Name=pebC;gbkey=Gene;gene=pebC;gene_biotype=protein_coding;locus_tag=ACYKJH_000635 DBLQKK010000007.1 Protein Homology CDS 19465 20193 . + 0 ID=cds-HIH2188778.1;Parent=gene-ACYKJH_000635;Dbxref=NCBI_GP:HIH2188778.1;Name=HIH2188778.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=pebC;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344320.1;locus_tag=ACYKJH_000635;product=amino acid ABC transporter ATP-binding protein;protein_id=HIH2188778.1;transl_table=11 DBLQKK010000007.1 tpg gene 20215 20994 . + . ID=gene-ACYKJH_000636;Name=peb1A;gbkey=Gene;gene=peb1A;gene_biotype=protein_coding;locus_tag=ACYKJH_000636 DBLQKK010000007.1 Protein Homology CDS 20215 20994 . + 0 ID=cds-HIH2188779.1;Parent=gene-ACYKJH_000636;Dbxref=NCBI_GP:HIH2188779.1;Name=HIH2188779.1;gbkey=CDS;gene=peb1A;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344319.1;locus_tag=ACYKJH_000636;product=bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein PEB1a;protein_id=HIH2188779.1;transl_table=11 DBLQKK010000007.1 tpg gene 20996 21748 . + . ID=gene-ACYKJH_000637;Name=ACYKJH_000637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000637 DBLQKK010000007.1 Protein Homology CDS 20996 21748 . + 0 ID=cds-HIH2188780.1;Parent=gene-ACYKJH_000637;Dbxref=NCBI_GP:HIH2188780.1;Name=HIH2188780.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344318.1;locus_tag=ACYKJH_000637;product=amino acid ABC transporter permease;protein_id=HIH2188780.1;transl_table=11 DBLQKK010000007.1 tpg gene 21759 22418 . + . ID=gene-ACYKJH_000638;Name=ACYKJH_000638;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000638 DBLQKK010000007.1 Protein Homology CDS 21759 22418 . + 0 ID=cds-HIH2188781.1;Parent=gene-ACYKJH_000638;Dbxref=NCBI_GP:HIH2188781.1;Name=HIH2188781.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344317.1;locus_tag=ACYKJH_000638;product=amino acid ABC transporter permease;protein_id=HIH2188781.1;transl_table=11 DBLQKK010000007.1 tpg gene 22526 23455 . + . ID=gene-ACYKJH_000639;Name=prsA;gbkey=Gene;gene=prsA;gene_biotype=protein_coding;locus_tag=ACYKJH_000639 DBLQKK010000007.1 Protein Homology CDS 22526 23455 . + 0 ID=cds-HIH2188782.1;Parent=gene-ACYKJH_000639;Dbxref=NCBI_GP:HIH2188782.1;Name=HIH2188782.1;Ontology_term=GO:0006015,GO:0009156,GO:0009165,GO:0016310,GO:0000287,GO:0004749,GO:0005524,GO:0016301,GO:0005737;gbkey=CDS;gene=prsA;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,ribose phosphate diphosphokinase activity|0004749||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA,ribonucleoside monophosphate biosynthetic process|0009156||IEA,nucleotide biosynthetic process|0009165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344316.1;locus_tag=ACYKJH_000639;product=ribose-phosphate pyrophosphokinase;protein_id=HIH2188782.1;transl_table=11 DBLQKK010000007.1 tpg gene 23622 25733 . + . ID=gene-ACYKJH_000640;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=ACYKJH_000640 DBLQKK010000007.1 Protein Homology CDS 23622 25733 . + 0 ID=cds-HIH2188783.1;Parent=gene-ACYKJH_000640;Dbxref=NCBI_GP:HIH2188783.1;Name=HIH2188783.1;Ontology_term=GO:0009267,GO:0016020;gbkey=CDS;gene=cstA;go_component=membrane|0016020||IEA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344315.1;locus_tag=ACYKJH_000640;product=carbon starvation CstA family protein;protein_id=HIH2188783.1;transl_table=11 DBLQKK010000007.1 tpg gene 25714 25911 . + . ID=gene-ACYKJH_000641;Name=kcuS;gbkey=Gene;gene=kcuS;gene_biotype=protein_coding;locus_tag=ACYKJH_000641 DBLQKK010000007.1 Protein Homology CDS 25714 25911 . + 0 ID=cds-HIH2188784.1;Parent=gene-ACYKJH_000641;Dbxref=NCBI_GP:HIH2188784.1;Name=HIH2188784.1;gbkey=CDS;gene=kcuS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_148936501.1;locus_tag=ACYKJH_000641;product=KCU-star family selenoprotein;protein_id=HIH2188784.1;transl_table=11 DBLQKK010000007.1 tpg gene 25951 26364 . - . ID=gene-ACYKJH_000642;Name=ACYKJH_000642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000642 DBLQKK010000007.1 Protein Homology CDS 25951 26364 . - 0 ID=cds-HIH2188785.1;Parent=gene-ACYKJH_000642;Dbxref=NCBI_GP:HIH2188785.1;Name=HIH2188785.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002781726.1;locus_tag=ACYKJH_000642;product=acyl-CoA thioesterase;protein_id=HIH2188785.1;transl_table=11 DBLQKK010000007.1 tpg gene 26426 28258 . + . ID=gene-ACYKJH_000643;Name=ciaB;gbkey=Gene;gene=ciaB;gene_biotype=protein_coding;locus_tag=ACYKJH_000643 DBLQKK010000007.1 Protein Homology CDS 26426 28258 . + 0 ID=cds-HIH2188786.1;Parent=gene-ACYKJH_000643;Dbxref=NCBI_GP:HIH2188786.1;Name=HIH2188786.1;gbkey=CDS;gene=ciaB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344312.1;locus_tag=ACYKJH_000643;product=invasion protein CiaB;protein_id=HIH2188786.1;transl_table=11 DBLQKK010000007.1 tpg gene 28360 28656 . + . ID=gene-ACYKJH_000644;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=ACYKJH_000644 DBLQKK010000007.1 Protein Homology CDS 28360 28656 . + 0 ID=cds-HIH2188787.1;Parent=gene-ACYKJH_000644;Dbxref=NCBI_GP:HIH2188787.1;Name=HIH2188787.1;Ontology_term=GO:0030261,GO:0003677;gbkey=CDS;gene=hupB;go_function=DNA binding|0003677||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344311.1;locus_tag=ACYKJH_000644;product=HU family DNA-binding protein;protein_id=HIH2188787.1;transl_table=11 DBLQKK010000007.1 tpg gene 28783 29682 . + . ID=gene-ACYKJH_000645;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=ACYKJH_000645 DBLQKK010000007.1 Protein Homology CDS 28783 29682 . + 0 ID=cds-HIH2188788.1;Parent=gene-ACYKJH_000645;Dbxref=NCBI_GP:HIH2188788.1;Name=HIH2188788.1;gbkey=CDS;gene=cysM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344310.1;locus_tag=ACYKJH_000645;product=cysteine synthase B;protein_id=HIH2188788.1;transl_table=11 DBLQKK010000007.1 tpg gene 29689 30249 . - . ID=gene-ACYKJH_000646;Name=ACYKJH_000646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000646 DBLQKK010000007.1 Protein Homology CDS 29689 30249 . - 0 ID=cds-HIH2188789.1;Parent=gene-ACYKJH_000646;Dbxref=NCBI_GP:HIH2188789.1;Name=HIH2188789.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344309.1;locus_tag=ACYKJH_000646;product=SCO family protein;protein_id=HIH2188789.1;transl_table=11 DBLQKK010000007.1 tpg gene 30246 30698 . - . ID=gene-ACYKJH_000647;Name=ACYKJH_000647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000647 DBLQKK010000007.1 Protein Homology CDS 30246 30698 . - 0 ID=cds-HIH2188790.1;Parent=gene-ACYKJH_000647;Dbxref=NCBI_GP:HIH2188790.1;Name=HIH2188790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344308.1;locus_tag=ACYKJH_000647;product=hypothetical protein;protein_id=HIH2188790.1;transl_table=11 DBLQKK010000007.1 tpg gene 30702 31121 . - . ID=gene-ACYKJH_000648;Name=ACYKJH_000648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000648 DBLQKK010000007.1 Protein Homology CDS 30702 31121 . - 0 ID=cds-HIH2188791.1;Parent=gene-ACYKJH_000648;Dbxref=NCBI_GP:HIH2188791.1;Name=HIH2188791.1;Ontology_term=GO:0016531;gbkey=CDS;go_function=copper chaperone activity|0016531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344307.1;locus_tag=ACYKJH_000648;product=copper chaperone PCu(A)C;protein_id=HIH2188791.1;transl_table=11 DBLQKK010000007.1 tpg gene 31207 31677 . - . ID=gene-ACYKJH_000649;Name=ACYKJH_000649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000649 DBLQKK010000007.1 Protein Homology CDS 31207 31677 . - 0 ID=cds-HIH2188792.1;Parent=gene-ACYKJH_000649;Dbxref=NCBI_GP:HIH2188792.1;Name=HIH2188792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344306.1;locus_tag=ACYKJH_000649;product=hypothetical protein;protein_id=HIH2188792.1;transl_table=11 DBLQKK010000007.1 tpg gene 31833 32810 . + . ID=gene-ACYKJH_000650;Name=ACYKJH_000650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000650 DBLQKK010000007.1 Protein Homology CDS 31833 32810 . + 0 ID=cds-HIH2188793.1;Parent=gene-ACYKJH_000650;Dbxref=NCBI_GP:HIH2188793.1;Name=HIH2188793.1;Ontology_term=GO:0018104,GO:0071972;gbkey=CDS;go_function=peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344305.1;locus_tag=ACYKJH_000650;product=L%2CD-transpeptidase family protein;protein_id=HIH2188793.1;transl_table=11 DBLQKK010000007.1 tpg gene 32811 33797 . + . ID=gene-ACYKJH_000651;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=ACYKJH_000651 DBLQKK010000007.1 Protein Homology CDS 32811 33797 . + 0 ID=cds-HIH2188794.1;Parent=gene-ACYKJH_000651;Dbxref=NCBI_GP:HIH2188794.1;Name=HIH2188794.1;gbkey=CDS;gene=alr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344304.1;locus_tag=ACYKJH_000651;product=alanine racemase;protein_id=HIH2188794.1;transl_table=11 DBLQKK010000007.1 tpg gene 33800 34267 . + . ID=gene-ACYKJH_000652;Name=ACYKJH_000652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000652 DBLQKK010000007.1 Protein Homology CDS 33800 34267 . + 0 ID=cds-HIH2188795.1;Parent=gene-ACYKJH_000652;Dbxref=NCBI_GP:HIH2188795.1;Name=HIH2188795.1;Ontology_term=GO:0001510,GO:0003723,GO:0008173,GO:0141098,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,tRNA (cytidine(34)-2'-O)-methyltransferase activity|0141098||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344303.1;locus_tag=ACYKJH_000652;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=HIH2188795.1;transl_table=11 DBLQKK010000007.1 tpg gene 34371 35837 . + . ID=gene-ACYKJH_000653;Name=ACYKJH_000653;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000653 DBLQKK010000007.1 Protein Homology CDS 34371 35837 . + 0 ID=cds-HIH2188796.1;Parent=gene-ACYKJH_000653;Dbxref=NCBI_GP:HIH2188796.1;Name=HIH2188796.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344302.1;locus_tag=ACYKJH_000653;product=alanine/glycine:cation symporter family protein;protein_id=HIH2188796.1;transl_table=11 DBLQKK010000007.1 tpg gene 35865 36593 . - . ID=gene-ACYKJH_000654;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=ACYKJH_000654 DBLQKK010000007.1 Protein Homology CDS 35865 36593 . - 0 ID=cds-HIH2188797.1;Parent=gene-ACYKJH_000654;Dbxref=NCBI_GP:HIH2188797.1;Name=HIH2188797.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344301.1;locus_tag=ACYKJH_000654;product=amino acid ABC transporter ATP-binding protein;protein_id=HIH2188797.1;transl_table=11 DBLQKK010000007.1 tpg gene 36586 37329 . - . ID=gene-ACYKJH_000655;Name=ACYKJH_000655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000655 DBLQKK010000007.1 Protein Homology CDS 36586 37329 . - 0 ID=cds-HIH2188798.1;Parent=gene-ACYKJH_000655;Dbxref=NCBI_GP:HIH2188798.1;Name=HIH2188798.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344300.1;locus_tag=ACYKJH_000655;product=amino acid ABC transporter permease;protein_id=HIH2188798.1;transl_table=11 DBLQKK010000007.1 tpg gene 37412 37591 . + . ID=gene-ACYKJH_000656;Name=ACYKJH_000656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000656 DBLQKK010000007.1 Protein Homology CDS 37412 37591 . + 0 ID=cds-HIH2188799.1;Parent=gene-ACYKJH_000656;Dbxref=NCBI_GP:HIH2188799.1;Name=HIH2188799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344299.1;locus_tag=ACYKJH_000656;product=hypothetical protein;protein_id=HIH2188799.1;transl_table=11 DBLQKK010000007.1 tpg gene 37584 38153 . + . ID=gene-ACYKJH_000657;Name=thiJ;gbkey=Gene;gene=thiJ;gene_biotype=protein_coding;locus_tag=ACYKJH_000657 DBLQKK010000007.1 Protein Homology CDS 37584 38153 . + 0 ID=cds-HIH2188800.1;Parent=gene-ACYKJH_000657;Dbxref=NCBI_GP:HIH2188800.1;Name=HIH2188800.1;gbkey=CDS;gene=thiJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344298.1;locus_tag=ACYKJH_000657;product=DJ-1 family glyoxalase III;protein_id=HIH2188800.1;transl_table=11 DBLQKK010000007.1 tpg gene 38183 38548 . - . ID=gene-ACYKJH_000658;Name=ACYKJH_000658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000658 DBLQKK010000007.1 Protein Homology CDS 38183 38548 . - 0 ID=cds-HIH2188801.1;Parent=gene-ACYKJH_000658;Dbxref=NCBI_GP:HIH2188801.1;Name=HIH2188801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344297.1;locus_tag=ACYKJH_000658;product=histidine triad nucleotide-binding protein;protein_id=HIH2188801.1;transl_table=11 DBLQKK010000007.1 tpg gene 38671 39663 . + . ID=gene-ACYKJH_000659;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=ACYKJH_000659 DBLQKK010000007.1 Protein Homology CDS 38671 39663 . + 0 ID=cds-HIH2188802.1;Parent=gene-ACYKJH_000659;Dbxref=NCBI_GP:HIH2188802.1;Name=HIH2188802.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344296.1;locus_tag=ACYKJH_000659;product=phenylalanine--tRNA ligase subunit alpha;protein_id=HIH2188802.1;transl_table=11 DBLQKK010000007.1 tpg gene 39660 41981 . + . ID=gene-ACYKJH_000660;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=ACYKJH_000660 DBLQKK010000007.1 Protein Homology CDS 39660 41981 . + 0 ID=cds-HIH2188803.1;Parent=gene-ACYKJH_000660;Dbxref=NCBI_GP:HIH2188803.1;Name=HIH2188803.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344295.1;locus_tag=ACYKJH_000660;product=phenylalanine--tRNA ligase subunit beta;protein_id=HIH2188803.1;transl_table=11 DBLQKK010000007.1 tpg gene 41978 43264 . + . ID=gene-ACYKJH_000661;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=ACYKJH_000661 DBLQKK010000007.1 Protein Homology CDS 41978 43264 . + 0 ID=cds-HIH2188804.1;Parent=gene-ACYKJH_000661;Dbxref=NCBI_GP:HIH2188804.1;Name=HIH2188804.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344294.1;locus_tag=ACYKJH_000661;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=HIH2188804.1;transl_table=11 DBLQKK010000007.1 tpg gene 43254 44087 . + . ID=gene-ACYKJH_000662;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;locus_tag=ACYKJH_000662 DBLQKK010000007.1 Protein Homology CDS 43254 44087 . + 0 ID=cds-HIH2188805.1;Parent=gene-ACYKJH_000662;Dbxref=NCBI_GP:HIH2188805.1;Name=HIH2188805.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344293.1;locus_tag=ACYKJH_000662;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=HIH2188805.1;transl_table=11 DBLQKK010000007.1 tpg gene 44219 45889 . + . ID=gene-ACYKJH_000663;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=ACYKJH_000663 DBLQKK010000007.1 Protein Homology CDS 44219 45889 . + 0 ID=cds-HIH2188806.1;Parent=gene-ACYKJH_000663;Dbxref=NCBI_GP:HIH2188806.1;Name=HIH2188806.1;Ontology_term=GO:0003676;gbkey=CDS;gene=rpsA;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344292.1;locus_tag=ACYKJH_000663;product=30S ribosomal protein S1;protein_id=HIH2188806.1;transl_table=11 DBLQKK010000007.1 tpg gene 45889 46377 . + . ID=gene-ACYKJH_000664;Name=ACYKJH_000664;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000664 DBLQKK010000007.1 Protein Homology CDS 45889 46377 . + 0 ID=cds-HIH2188807.1;Parent=gene-ACYKJH_000664;Dbxref=NCBI_GP:HIH2188807.1;Name=HIH2188807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344291.1;locus_tag=ACYKJH_000664;product=hypothetical protein;protein_id=HIH2188807.1;transl_table=11 DBLQKK010000007.1 tpg gene 46374 47957 . + . ID=gene-ACYKJH_000665;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=ACYKJH_000665 DBLQKK010000007.1 Protein Homology CDS 46374 47957 . + 0 ID=cds-HIH2188808.1;Parent=gene-ACYKJH_000665;Dbxref=NCBI_GP:HIH2188808.1;Name=HIH2188808.1;Ontology_term=GO:0006564,GO:0004617;gbkey=CDS;gene=serA;go_function=phosphoglycerate dehydrogenase activity|0004617||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344290.1;locus_tag=ACYKJH_000665;product=phosphoglycerate dehydrogenase;protein_id=HIH2188808.1;transl_table=11 DBLQKK010000007.1 tpg gene 47944 48606 . + . ID=gene-ACYKJH_000666;Name=ACYKJH_000666;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000666 DBLQKK010000007.1 Protein Homology CDS 47944 48606 . + 0 ID=cds-HIH2188809.1;Parent=gene-ACYKJH_000666;Dbxref=NCBI_GP:HIH2188809.1;Name=HIH2188809.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344289.1;locus_tag=ACYKJH_000666;product=response regulator transcription factor;protein_id=HIH2188809.1;transl_table=11 DBLQKK010000007.1 tpg gene 48600 49889 . + . ID=gene-ACYKJH_000667;Name=ACYKJH_000667;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000667 DBLQKK010000007.1 Protein Homology CDS 48600 49889 . + 0 ID=cds-HIH2188810.1;Parent=gene-ACYKJH_000667;Dbxref=NCBI_GP:HIH2188810.1;Name=HIH2188810.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344288.1;locus_tag=ACYKJH_000667;product=sensor histidine kinase;protein_id=HIH2188810.1;transl_table=11 DBLQKK010000007.1 tpg gene 49893 51824 . + . ID=gene-ACYKJH_000668;Name=abc-f;gbkey=Gene;gene=abc-f;gene_biotype=protein_coding;locus_tag=ACYKJH_000668 DBLQKK010000007.1 Protein Homology CDS 49893 51824 . + 0 ID=cds-HIH2188811.1;Parent=gene-ACYKJH_000668;Dbxref=NCBI_GP:HIH2188811.1;Name=HIH2188811.1;Ontology_term=GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=abc-f;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344287.1;locus_tag=ACYKJH_000668;product=ribosomal protection-like ABC-F family protein;protein_id=HIH2188811.1;transl_table=11 DBLQKK010000007.1 tpg gene 51853 51927 . - . ID=gene-ACYKJH_000669;Name=ACYKJH_000669;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_000669 DBLQKK010000007.1 tRNAscan-SE tRNA 51853 51927 . - . ID=rna-ACYKJH_000669;Parent=gene-ACYKJH_000669;anticodon=(pos:complement(51893..51895));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000669;product=tRNA-Gly DBLQKK010000007.1 tRNAscan-SE exon 51853 51927 . - . ID=exon-ACYKJH_000669-1;Parent=rna-ACYKJH_000669;anticodon=(pos:complement(51893..51895));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000669;product=tRNA-Gly DBLQKK010000007.1 tpg gene 51938 52024 . - . ID=gene-ACYKJH_000670;Name=ACYKJH_000670;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_000670 DBLQKK010000007.1 tRNAscan-SE tRNA 51938 52024 . - . ID=rna-ACYKJH_000670;Parent=gene-ACYKJH_000670;anticodon=(pos:complement(51988..51990));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000670;product=tRNA-Leu DBLQKK010000007.1 tRNAscan-SE exon 51938 52024 . - . ID=exon-ACYKJH_000670-1;Parent=rna-ACYKJH_000670;anticodon=(pos:complement(51988..51990));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000670;product=tRNA-Leu DBLQKK010000007.1 tpg gene 52205 54457 . + . ID=gene-ACYKJH_000671;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=ACYKJH_000671 DBLQKK010000007.1 Protein Homology CDS 52205 54457 . + 0 ID=cds-HIH2188812.1;Parent=gene-ACYKJH_000671;Dbxref=NCBI_GP:HIH2188812.1;Name=HIH2188812.1;gbkey=CDS;gene=flgL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344286.1;locus_tag=ACYKJH_000671;product=flagellar hook-associated protein FlgL;protein_id=HIH2188812.1;transl_table=11 DBLQKK010000007.1 tpg gene 54567 57407 . + . ID=gene-ACYKJH_000672;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=ACYKJH_000672 DBLQKK010000007.1 Protein Homology CDS 54567 57407 . + 0 ID=cds-HIH2188813.1;Parent=gene-ACYKJH_000672;Dbxref=NCBI_GP:HIH2188813.1;Name=HIH2188813.1;gbkey=CDS;gene=ftsK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344285.1;locus_tag=ACYKJH_000672;product=DNA translocase FtsK;protein_id=HIH2188813.1;transl_table=11 DBLQKK010000007.1 tpg gene 57493 57765 . - . ID=gene-ACYKJH_000673;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=ACYKJH_000673 DBLQKK010000007.1 Protein Homology CDS 57493 57765 . - 0 ID=cds-HIH2188814.1;Parent=gene-ACYKJH_000673;Dbxref=NCBI_GP:HIH2188814.1;Name=HIH2188814.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344284.1;locus_tag=ACYKJH_000673;product=30S ribosomal protein S15;protein_id=HIH2188814.1;transl_table=11 DBLQKK010000007.1 tpg gene 57940 58350 . + . ID=gene-ACYKJH_000674;Name=ACYKJH_000674;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000674 DBLQKK010000007.1 Protein Homology CDS 57940 58350 . + 0 ID=cds-HIH2188815.1;Parent=gene-ACYKJH_000674;Dbxref=NCBI_GP:HIH2188815.1;Name=HIH2188815.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344283.1;locus_tag=ACYKJH_000674;product=Rrf2 family transcriptional regulator;protein_id=HIH2188815.1;transl_table=11 DBLQKK010000007.1 tpg gene 58337 60511 . + . ID=gene-ACYKJH_000675;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=ACYKJH_000675 DBLQKK010000007.1 Protein Homology CDS 58337 60511 . + 0 ID=cds-HIH2188816.1;Parent=gene-ACYKJH_000675;Dbxref=NCBI_GP:HIH2188816.1;Name=HIH2188816.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344282.1;locus_tag=ACYKJH_000675;product=flagellar biosynthesis protein FlhA;protein_id=HIH2188816.1;transl_table=11 DBLQKK010000007.1 tpg gene 60520 61566 . + . ID=gene-ACYKJH_000676;Name=ACYKJH_000676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000676 DBLQKK010000007.1 Protein Homology CDS 60520 61566 . + 0 ID=cds-HIH2188817.1;Parent=gene-ACYKJH_000676;Dbxref=NCBI_GP:HIH2188817.1;Name=HIH2188817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344281.1;locus_tag=ACYKJH_000676;product=DHH family phosphoesterase;protein_id=HIH2188817.1;transl_table=11 DBLQKK010000007.1 tpg gene 61550 61792 . + . ID=gene-ACYKJH_000677;Name=ACYKJH_000677;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000677 DBLQKK010000007.1 Protein Homology CDS 61550 61792 . + 0 ID=cds-HIH2188818.1;Parent=gene-ACYKJH_000677;Dbxref=NCBI_GP:HIH2188818.1;Name=HIH2188818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344280.1;locus_tag=ACYKJH_000677;product=hypothetical protein;protein_id=HIH2188818.1;transl_table=11 DBLQKK010000007.1 tpg gene 61789 62421 . + . ID=gene-ACYKJH_000678;Name=ACYKJH_000678;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000678 DBLQKK010000007.1 Protein Homology CDS 61789 62421 . + 0 ID=cds-HIH2188819.1;Parent=gene-ACYKJH_000678;Dbxref=NCBI_GP:HIH2188819.1;Name=HIH2188819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344279.1;locus_tag=ACYKJH_000678;product=hypothetical protein;protein_id=HIH2188819.1;transl_table=11 DBLQKK010000007.1 tpg gene 62409 62549 . - . ID=gene-ACYKJH_000679;Name=ACYKJH_000679;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000679 DBLQKK010000007.1 Protein Homology CDS 62409 62549 . - 0 ID=cds-HIH2188820.1;Parent=gene-ACYKJH_000679;Dbxref=NCBI_GP:HIH2188820.1;Name=HIH2188820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002852524.1;locus_tag=ACYKJH_000679;product=hypothetical protein;protein_id=HIH2188820.1;transl_table=11 DBLQKK010000007.1 tpg gene 62754 62972 . + . ID=gene-ACYKJH_000680;Name=ACYKJH_000680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000680 DBLQKK010000007.1 GeneMarkS-2+ CDS 62754 62972 . + 0 ID=cds-HIH2188821.1;Parent=gene-ACYKJH_000680;Dbxref=NCBI_GP:HIH2188821.1;Name=HIH2188821.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_000680;product=hypothetical protein;protein_id=HIH2188821.1;transl_table=11 DBLQKK010000007.1 tpg gene 62981 63304 . + . ID=gene-ACYKJH_000681;Name=ACYKJH_000681;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000681 DBLQKK010000007.1 Protein Homology CDS 62981 63304 . + 0 ID=cds-HIH2188822.1;Parent=gene-ACYKJH_000681;Dbxref=NCBI_GP:HIH2188822.1;Name=HIH2188822.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF044772.3;locus_tag=ACYKJH_000681;product=c-type cytochrome;protein_id=HIH2188822.1;transl_table=11 DBLQKK010000007.1 tpg gene 63342 63746 . + . ID=gene-ACYKJH_000682;Name=ACYKJH_000682;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000682 DBLQKK010000007.1 Protein Homology CDS 63342 63746 . + 0 ID=cds-HIH2188823.1;Parent=gene-ACYKJH_000682;Dbxref=NCBI_GP:HIH2188823.1;Name=HIH2188823.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF012264.6;locus_tag=ACYKJH_000682;product=c-type cytochrome;protein_id=HIH2188823.1;transl_table=11 DBLQKK010000007.1 tpg gene 63781 64422 . - . ID=gene-ACYKJH_000683;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=ACYKJH_000683 DBLQKK010000007.1 Protein Homology CDS 63781 64422 . - 0 ID=cds-HIH2188824.1;Parent=gene-ACYKJH_000683;Dbxref=NCBI_GP:HIH2188824.1;Name=HIH2188824.1;Ontology_term=GO:0015035;gbkey=CDS;gene=dsbA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344273.1;locus_tag=ACYKJH_000683;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=HIH2188824.1;transl_table=11 DBLQKK010000007.1 tpg gene 64506 64676 . - . ID=gene-ACYKJH_000684;Name=ACYKJH_000684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000684 DBLQKK010000007.1 GeneMarkS-2+ CDS 64506 64676 . - 0 ID=cds-HIH2188825.1;Parent=gene-ACYKJH_000684;Dbxref=NCBI_GP:HIH2188825.1;Name=HIH2188825.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_000684;product=hypothetical protein;protein_id=HIH2188825.1;transl_table=11 DBLQKK010000007.1 tpg gene 64771 65136 . - . ID=gene-ACYKJH_000685;Name=ACYKJH_000685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000685 DBLQKK010000007.1 Protein Homology CDS 64771 65136 . - 0 ID=cds-HIH2188826.1;Parent=gene-ACYKJH_000685;Dbxref=NCBI_GP:HIH2188826.1;Name=HIH2188826.1;Ontology_term=GO:0004062;gbkey=CDS;go_function=aryl sulfotransferase activity|0004062||IEA;inference=COORDINATES: protein motif:HMM:NF017722.6;locus_tag=ACYKJH_000685;product=aryl-sulfate sulfotransferase;protein_id=HIH2188826.1;transl_table=11 DBLQKK010000007.1 tpg gene 65147 65299 . - . ID=gene-ACYKJH_000686;Name=ACYKJH_000686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000686 DBLQKK010000007.1 Protein Homology CDS 65147 65299 . - 0 ID=cds-HIH2188827.1;Parent=gene-ACYKJH_000686;Dbxref=NCBI_GP:HIH2188827.1;Name=HIH2188827.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017722.6;locus_tag=ACYKJH_000686;product=hypothetical protein;protein_id=HIH2188827.1;transl_table=11 DBLQKK010000007.1 tpg gene 65527 65658 . - . ID=gene-ACYKJH_000687;Name=ACYKJH_000687;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000687 DBLQKK010000007.1 GeneMarkS-2+ CDS 65527 65658 . - 0 ID=cds-HIH2188828.1;Parent=gene-ACYKJH_000687;Dbxref=NCBI_GP:HIH2188828.1;Name=HIH2188828.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_000687;product=hypothetical protein;protein_id=HIH2188828.1;transl_table=11 DBLQKK010000007.1 tpg gene 65706 65921 . - . ID=gene-ACYKJH_000688;Name=ACYKJH_000688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000688 DBLQKK010000007.1 GeneMarkS-2+ CDS 65706 65921 . - 0 ID=cds-HIH2188829.1;Parent=gene-ACYKJH_000688;Dbxref=NCBI_GP:HIH2188829.1;Name=HIH2188829.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_000688;product=aryl-sulfate sulfotransferase N-terminal domain-containing protein;protein_id=HIH2188829.1;transl_table=11 DBLQKK010000007.1 tpg gene 65977 66777 . - . ID=gene-ACYKJH_000689;Name=dsbI;gbkey=Gene;gene=dsbI;gene_biotype=protein_coding;locus_tag=ACYKJH_000689 DBLQKK010000007.1 Protein Homology CDS 65977 66777 . - 0 ID=cds-HIH2188830.1;Parent=gene-ACYKJH_000689;Dbxref=NCBI_GP:HIH2188830.1;Name=HIH2188830.1;gbkey=CDS;gene=dsbI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344272.1;locus_tag=ACYKJH_000689;product=protein-disulfide oxidoreductase DsbI;protein_id=HIH2188830.1;transl_table=11 DBLQKK010000007.1 tpg gene 66774 67436 . - . ID=gene-ACYKJH_000690;Name=ACYKJH_000690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000690 DBLQKK010000007.1 Protein Homology CDS 66774 67436 . - 0 ID=cds-HIH2188831.1;Parent=gene-ACYKJH_000690;Dbxref=NCBI_GP:HIH2188831.1;Name=HIH2188831.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012661276.1;locus_tag=ACYKJH_000690;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=HIH2188831.1;transl_table=11 ##sequence-region DBLQKK010000008.1 1 65614 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000008.1 tpg region 1 65614 . + . ID=DBLQKK010000008.1:1..65614;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000008.1 tpg gene 140 1138 . - . ID=gene-ACYKJH_000691;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=ACYKJH_000691 DBLQKK010000008.1 Protein Homology CDS 140 1138 . - 0 ID=cds-HIH2188832.1;Parent=gene-ACYKJH_000691;Dbxref=NCBI_GP:HIH2188832.1;Name=HIH2188832.1;gbkey=CDS;gene=mnmH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343934.1;locus_tag=ACYKJH_000691;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=HIH2188832.1;transl_table=11 DBLQKK010000008.1 tpg gene 1128 1613 . - . ID=gene-ACYKJH_000692;Name=ACYKJH_000692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000692 DBLQKK010000008.1 Protein Homology CDS 1128 1613 . - 0 ID=cds-HIH2188833.1;Parent=gene-ACYKJH_000692;Dbxref=NCBI_GP:HIH2188833.1;Name=HIH2188833.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343933.1;locus_tag=ACYKJH_000692;product=HIT family protein;protein_id=HIH2188833.1;transl_table=11 DBLQKK010000008.1 tpg gene 1623 2399 . - . ID=gene-ACYKJH_000693;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=ACYKJH_000693 DBLQKK010000008.1 Protein Homology CDS 1623 2399 . - 0 ID=cds-HIH2188834.1;Parent=gene-ACYKJH_000693;Dbxref=NCBI_GP:HIH2188834.1;Name=HIH2188834.1;gbkey=CDS;gene=trpC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343932.1;locus_tag=ACYKJH_000693;product=indole-3-glycerol phosphate synthase TrpC;protein_id=HIH2188834.1;transl_table=11 DBLQKK010000008.1 tpg gene 2396 3673 . - . ID=gene-ACYKJH_000694;Name=ACYKJH_000694;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000694 DBLQKK010000008.1 Protein Homology CDS 2396 3673 . - 0 ID=cds-HIH2188835.1;Parent=gene-ACYKJH_000694;Dbxref=NCBI_GP:HIH2188835.1;Name=HIH2188835.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343931.1;locus_tag=ACYKJH_000694;product=tetratricopeptide repeat protein;protein_id=HIH2188835.1;transl_table=11 DBLQKK010000008.1 tpg gene 3646 4020 . - . ID=gene-ACYKJH_000695;Name=ACYKJH_000695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000695 DBLQKK010000008.1 Protein Homology CDS 3646 4020 . - 0 ID=cds-HIH2188836.1;Parent=gene-ACYKJH_000695;Dbxref=NCBI_GP:HIH2188836.1;Name=HIH2188836.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343930.1;locus_tag=ACYKJH_000695;product=YkgJ family cysteine cluster protein;protein_id=HIH2188836.1;transl_table=11 DBLQKK010000008.1 tpg gene 4010 4711 . - . ID=gene-ACYKJH_000696;Name=ACYKJH_000696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000696 DBLQKK010000008.1 Protein Homology CDS 4010 4711 . - 0 ID=cds-HIH2188837.1;Parent=gene-ACYKJH_000696;Dbxref=NCBI_GP:HIH2188837.1;Name=HIH2188837.1;Ontology_term=GO:0032259,GO:0008170,GO:0008757,GO:0016430,GO:1904047;gbkey=CDS;go_function=N-methyltransferase activity|0008170||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343929.1;locus_tag=ACYKJH_000696;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=HIH2188837.1;transl_table=11 DBLQKK010000008.1 tpg gene 4717 4866 . - . ID=gene-ACYKJH_000697;Name=ACYKJH_000697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000697 DBLQKK010000008.1 Protein Homology CDS 4717 4866 . - 0 ID=cds-HIH2188838.1;Parent=gene-ACYKJH_000697;Dbxref=NCBI_GP:HIH2188838.1;Name=HIH2188838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343928.1;locus_tag=ACYKJH_000697;product=hypothetical protein;protein_id=HIH2188838.1;transl_table=11 DBLQKK010000008.1 tpg gene 4884 4960 . - . ID=gene-ACYKJH_000698;Name=ACYKJH_000698;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_000698 DBLQKK010000008.1 tRNAscan-SE tRNA 4884 4960 . - . ID=rna-ACYKJH_000698;Parent=gene-ACYKJH_000698;anticodon=(pos:complement(4924..4926));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000698;product=tRNA-Arg DBLQKK010000008.1 tRNAscan-SE exon 4884 4960 . - . ID=exon-ACYKJH_000698-1;Parent=rna-ACYKJH_000698;anticodon=(pos:complement(4924..4926));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000698;product=tRNA-Arg DBLQKK010000008.1 tpg gene 4989 7064 . - . ID=gene-ACYKJH_000699;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=ACYKJH_000699 DBLQKK010000008.1 Protein Homology CDS 4989 7064 . - 0 ID=cds-HIH2188839.1;Parent=gene-ACYKJH_000699;Dbxref=NCBI_GP:HIH2188839.1;Name=HIH2188839.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343927.1;locus_tag=ACYKJH_000699;product=elongation factor G;protein_id=HIH2188839.1;transl_table=11 DBLQKK010000008.1 tpg gene 7077 7547 . - . ID=gene-ACYKJH_000700;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=ACYKJH_000700 DBLQKK010000008.1 Protein Homology CDS 7077 7547 . - 0 ID=cds-HIH2188840.1;Parent=gene-ACYKJH_000700;Dbxref=NCBI_GP:HIH2188840.1;Name=HIH2188840.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343926.1;locus_tag=ACYKJH_000700;product=30S ribosomal protein S7;protein_id=HIH2188840.1;transl_table=11 DBLQKK010000008.1 tpg gene 7617 8003 . - . ID=gene-ACYKJH_000701;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=ACYKJH_000701 DBLQKK010000008.1 Protein Homology CDS 7617 8003 . - 0 ID=cds-HIH2188841.1;Parent=gene-ACYKJH_000701;Dbxref=NCBI_GP:HIH2188841.1;Name=HIH2188841.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343925.1;locus_tag=ACYKJH_000701;product=30S ribosomal protein S12;protein_id=HIH2188841.1;transl_table=11 DBLQKK010000008.1 tpg gene 8331 9770 . - . ID=gene-ACYKJH_000702;Name=aldA;gbkey=Gene;gene=aldA;gene_biotype=protein_coding;locus_tag=ACYKJH_000702 DBLQKK010000008.1 Protein Homology CDS 8331 9770 . - 0 ID=cds-HIH2188842.1;Parent=gene-ACYKJH_000702;Dbxref=NCBI_GP:HIH2188842.1;Name=HIH2188842.1;Ontology_term=GO:0016620;gbkey=CDS;gene=aldA;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002874345.1;locus_tag=ACYKJH_000702;product=aldehyde dehydrogenase;protein_id=HIH2188842.1;transl_table=11 DBLQKK010000008.1 tpg gene 9784 10101 . - . ID=gene-ACYKJH_000703;Name=ACYKJH_000703;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000703 DBLQKK010000008.1 Protein Homology CDS 9784 10101 . - 0 ID=cds-HIH2188843.1;Parent=gene-ACYKJH_000703;Dbxref=NCBI_GP:HIH2188843.1;Name=HIH2188843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343922.1;locus_tag=ACYKJH_000703;product=L-rhamnose mutarotase;protein_id=HIH2188843.1;transl_table=11 DBLQKK010000008.1 tpg gene 10102 10872 . - . ID=gene-ACYKJH_000704;Name=ACYKJH_000704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000704 DBLQKK010000008.1 Protein Homology CDS 10102 10872 . - 0 ID=cds-HIH2188844.1;Parent=gene-ACYKJH_000704;Dbxref=NCBI_GP:HIH2188844.1;Name=HIH2188844.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343921.1;locus_tag=ACYKJH_000704;product=amidohydrolase family protein;protein_id=HIH2188844.1;transl_table=11 DBLQKK010000008.1 tpg gene 10856 12112 . - . ID=gene-ACYKJH_000705;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=ACYKJH_000705 DBLQKK010000008.1 Protein Homology CDS 10856 12112 . - 0 ID=cds-HIH2188845.1;Parent=gene-ACYKJH_000705;Dbxref=NCBI_GP:HIH2188845.1;Name=HIH2188845.1;Ontology_term=GO:0015756,GO:0015150,GO:0015535;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA,fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343920.1;locus_tag=ACYKJH_000705;product=L-fucose:H+ symporter permease;protein_id=HIH2188845.1;transl_table=11 DBLQKK010000008.1 tpg gene 12123 12911 . - . ID=gene-ACYKJH_000706;Name=ACYKJH_000706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000706 DBLQKK010000008.1 Protein Homology CDS 12123 12911 . - 0 ID=cds-HIH2188846.1;Parent=gene-ACYKJH_000706;Dbxref=NCBI_GP:HIH2188846.1;Name=HIH2188846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343919.1;locus_tag=ACYKJH_000706;product=SDR family oxidoreductase;protein_id=HIH2188846.1;transl_table=11 DBLQKK010000008.1 tpg gene 12912 14198 . - . ID=gene-ACYKJH_000707;Name=ACYKJH_000707;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000707 DBLQKK010000008.1 Protein Homology CDS 12912 14198 . - 0 ID=cds-HIH2188847.1;Parent=gene-ACYKJH_000707;Dbxref=NCBI_GP:HIH2188847.1;Name=HIH2188847.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004314306.1;locus_tag=ACYKJH_000707;product=MFS transporter;protein_id=HIH2188847.1;transl_table=11 DBLQKK010000008.1 tpg gene 14210 15376 . - . ID=gene-ACYKJH_000708;Name=uxaA';gbkey=Gene;gene=uxaA';gene_biotype=protein_coding;locus_tag=ACYKJH_000708 DBLQKK010000008.1 Protein Homology CDS 14210 15376 . - 0 ID=cds-HIH2188848.1;Parent=gene-ACYKJH_000708;Dbxref=NCBI_GP:HIH2188848.1;Name=HIH2188848.1;gbkey=CDS;gene=uxaA';inference=COORDINATES: similar to AA sequence:RefSeq:WP_002779463.1;locus_tag=ACYKJH_000708;product=UxaA family hydrolase;protein_id=HIH2188848.1;transl_table=11 DBLQKK010000008.1 tpg gene 15379 15642 . - . ID=gene-ACYKJH_000709;Name=ACYKJH_000709;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000709 DBLQKK010000008.1 Protein Homology CDS 15379 15642 . - 0 ID=cds-HIH2188849.1;Parent=gene-ACYKJH_000709;Dbxref=NCBI_GP:HIH2188849.1;Name=HIH2188849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002901625.1;locus_tag=ACYKJH_000709;product=UxaA family hydrolase;protein_id=HIH2188849.1;transl_table=11 DBLQKK010000008.1 tpg gene 15639 16547 . - . ID=gene-ACYKJH_000710;Name=ACYKJH_000710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000710 DBLQKK010000008.1 Protein Homology CDS 15639 16547 . - 0 ID=cds-HIH2188850.1;Parent=gene-ACYKJH_000710;Dbxref=NCBI_GP:HIH2188850.1;Name=HIH2188850.1;Ontology_term=GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343915.1;locus_tag=ACYKJH_000710;product=dihydrodipicolinate synthase family protein;protein_id=HIH2188850.1;transl_table=11 DBLQKK010000008.1 tpg gene 16777 17538 . + . ID=gene-ACYKJH_000711;Name=ACYKJH_000711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000711 DBLQKK010000008.1 Protein Homology CDS 16777 17538 . + 0 ID=cds-HIH2188851.1;Parent=gene-ACYKJH_000711;Dbxref=NCBI_GP:HIH2188851.1;Name=HIH2188851.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343914.1;locus_tag=ACYKJH_000711;product=IclR family transcriptional regulator;protein_id=HIH2188851.1;transl_table=11 DBLQKK010000008.1 tpg gene 17569 22122 . - . ID=gene-ACYKJH_000712;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=ACYKJH_000712 DBLQKK010000008.1 Protein Homology CDS 17569 22122 . - 0 ID=cds-HIH2188852.1;Parent=gene-ACYKJH_000712;Dbxref=NCBI_GP:HIH2188852.1;Name=HIH2188852.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343913.1;locus_tag=ACYKJH_000712;product=DNA-directed RNA polymerase subunit beta';protein_id=HIH2188852.1;transl_table=11 DBLQKK010000008.1 tpg gene 22115 26251 . - . ID=gene-ACYKJH_000713;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=ACYKJH_000713 DBLQKK010000008.1 Protein Homology CDS 22115 26251 . - 0 ID=cds-HIH2188853.1;Parent=gene-ACYKJH_000713;Dbxref=NCBI_GP:HIH2188853.1;Name=HIH2188853.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343912.1;locus_tag=ACYKJH_000713;product=DNA-directed RNA polymerase subunit beta;protein_id=HIH2188853.1;transl_table=11 DBLQKK010000008.1 tpg gene 26360 26737 . - . ID=gene-ACYKJH_000714;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=ACYKJH_000714 DBLQKK010000008.1 Protein Homology CDS 26360 26737 . - 0 ID=cds-HIH2188854.1;Parent=gene-ACYKJH_000714;Dbxref=NCBI_GP:HIH2188854.1;Name=HIH2188854.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002858569.1;locus_tag=ACYKJH_000714;product=50S ribosomal protein L7/L12;protein_id=HIH2188854.1;transl_table=11 DBLQKK010000008.1 tpg gene 26758 27237 . - . ID=gene-ACYKJH_000715;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=ACYKJH_000715 DBLQKK010000008.1 Protein Homology CDS 26758 27237 . - 0 ID=cds-HIH2188855.1;Parent=gene-ACYKJH_000715;Dbxref=NCBI_GP:HIH2188855.1;Name=HIH2188855.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343910.1;locus_tag=ACYKJH_000715;product=50S ribosomal protein L10;protein_id=HIH2188855.1;transl_table=11 DBLQKK010000008.1 tpg gene 27389 28090 . - . ID=gene-ACYKJH_000716;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=ACYKJH_000716 DBLQKK010000008.1 Protein Homology CDS 27389 28090 . - 0 ID=cds-HIH2188856.1;Parent=gene-ACYKJH_000716;Dbxref=NCBI_GP:HIH2188856.1;Name=HIH2188856.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343909.1;locus_tag=ACYKJH_000716;product=50S ribosomal protein L1;protein_id=HIH2188856.1;transl_table=11 DBLQKK010000008.1 tpg gene 28145 28570 . - . ID=gene-ACYKJH_000717;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=ACYKJH_000717 DBLQKK010000008.1 Protein Homology CDS 28145 28570 . - 0 ID=cds-HIH2188857.1;Parent=gene-ACYKJH_000717;Dbxref=NCBI_GP:HIH2188857.1;Name=HIH2188857.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343908.1;locus_tag=ACYKJH_000717;product=50S ribosomal protein L11;protein_id=HIH2188857.1;transl_table=11 DBLQKK010000008.1 tpg gene 28596 29129 . - . ID=gene-ACYKJH_000718;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=ACYKJH_000718 DBLQKK010000008.1 Protein Homology CDS 28596 29129 . - 0 ID=cds-HIH2188858.1;Parent=gene-ACYKJH_000718;Dbxref=NCBI_GP:HIH2188858.1;Name=HIH2188858.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343907.1;locus_tag=ACYKJH_000718;product=transcription termination/antitermination protein NusG;protein_id=HIH2188858.1;transl_table=11 DBLQKK010000008.1 tpg gene 29139 29318 . - . ID=gene-ACYKJH_000719;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=ACYKJH_000719 DBLQKK010000008.1 Protein Homology CDS 29139 29318 . - 0 ID=cds-HIH2188859.1;Parent=gene-ACYKJH_000719;Dbxref=NCBI_GP:HIH2188859.1;Name=HIH2188859.1;Ontology_term=GO:0009306,GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secE;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343906.1;locus_tag=ACYKJH_000719;product=preprotein translocase subunit SecE;protein_id=HIH2188859.1;transl_table=11 DBLQKK010000008.1 tpg gene 29337 29412 . - . ID=gene-ACYKJH_000720;Name=ACYKJH_000720;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_000720 DBLQKK010000008.1 tRNAscan-SE tRNA 29337 29412 . - . ID=rna-ACYKJH_000720;Parent=gene-ACYKJH_000720;anticodon=(pos:complement(29377..29379));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000720;product=tRNA-Trp DBLQKK010000008.1 tRNAscan-SE exon 29337 29412 . - . ID=exon-ACYKJH_000720-1;Parent=rna-ACYKJH_000720;anticodon=(pos:complement(29377..29379));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000720;product=tRNA-Trp DBLQKK010000008.1 tpg gene 29425 29583 . - . ID=gene-ACYKJH_000721;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=ACYKJH_000721 DBLQKK010000008.1 Protein Homology CDS 29425 29583 . - 0 ID=cds-HIH2188860.1;Parent=gene-ACYKJH_000721;Dbxref=NCBI_GP:HIH2188860.1;Name=HIH2188860.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343905.1;locus_tag=ACYKJH_000721;product=50S ribosomal protein L33;protein_id=HIH2188860.1;transl_table=11 DBLQKK010000008.1 tpg gene 29636 30835 . - . ID=gene-ACYKJH_000722;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=ACYKJH_000722 DBLQKK010000008.1 Protein Homology CDS 29636 30835 . - 0 ID=cds-HIH2188861.1;Parent=gene-ACYKJH_000722;Dbxref=NCBI_GP:HIH2188861.1;Name=HIH2188861.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343904.1;locus_tag=ACYKJH_000722;product=elongation factor Tu;protein_id=HIH2188861.1;transl_table=11 DBLQKK010000008.1 tpg gene 30904 30978 . - . ID=gene-ACYKJH_000723;Name=ACYKJH_000723;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_000723 DBLQKK010000008.1 tRNAscan-SE tRNA 30904 30978 . - . ID=rna-ACYKJH_000723;Parent=gene-ACYKJH_000723;anticodon=(pos:complement(30944..30946));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000723;product=tRNA-Thr DBLQKK010000008.1 tRNAscan-SE exon 30904 30978 . - . ID=exon-ACYKJH_000723-1;Parent=rna-ACYKJH_000723;anticodon=(pos:complement(30944..30946));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000723;product=tRNA-Thr DBLQKK010000008.1 tpg gene 31080 31156 . - . ID=gene-ACYKJH_000724;Name=ACYKJH_000724;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_000724 DBLQKK010000008.1 tRNAscan-SE tRNA 31080 31156 . - . ID=rna-ACYKJH_000724;Parent=gene-ACYKJH_000724;anticodon=(pos:complement(31120..31122));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000724;product=tRNA-Gly DBLQKK010000008.1 tRNAscan-SE exon 31080 31156 . - . ID=exon-ACYKJH_000724-1;Parent=rna-ACYKJH_000724;anticodon=(pos:complement(31120..31122));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000724;product=tRNA-Gly DBLQKK010000008.1 tpg gene 31163 31248 . - . ID=gene-ACYKJH_000725;Name=ACYKJH_000725;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_000725 DBLQKK010000008.1 tRNAscan-SE tRNA 31163 31248 . - . ID=rna-ACYKJH_000725;Parent=gene-ACYKJH_000725;anticodon=(pos:complement(31212..31214));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000725;product=tRNA-Tyr DBLQKK010000008.1 tRNAscan-SE exon 31163 31248 . - . ID=exon-ACYKJH_000725-1;Parent=rna-ACYKJH_000725;anticodon=(pos:complement(31212..31214));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000725;product=tRNA-Tyr DBLQKK010000008.1 tpg gene 31299 31374 . - . ID=gene-ACYKJH_000726;Name=ACYKJH_000726;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_000726 DBLQKK010000008.1 tRNAscan-SE tRNA 31299 31374 . - . ID=rna-ACYKJH_000726;Parent=gene-ACYKJH_000726;anticodon=(pos:complement(31339..31341));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000726;product=tRNA-Thr DBLQKK010000008.1 tRNAscan-SE exon 31299 31374 . - . ID=exon-ACYKJH_000726-1;Parent=rna-ACYKJH_000726;anticodon=(pos:complement(31339..31341));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000726;product=tRNA-Thr DBLQKK010000008.1 tpg pseudogene 31466 32226 . - . ID=gene-ACYKJH_000727;Name=ACYKJH_000727;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_000727;pseudo=true DBLQKK010000008.1 Protein Homology CDS 31466 32226 . - 0 ID=cds-ACYKJH_000727;Parent=gene-ACYKJH_000727;Note=frameshifted;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343903.1;locus_tag=ACYKJH_000727;product=amino acid ABC transporter ATP-binding protein;pseudo=true;transl_table=11 DBLQKK010000008.1 tpg gene 32228 32884 . - . ID=gene-ACYKJH_000728;Name=ACYKJH_000728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000728 DBLQKK010000008.1 Protein Homology CDS 32228 32884 . - 0 ID=cds-HIH2188862.1;Parent=gene-ACYKJH_000728;Dbxref=NCBI_GP:HIH2188862.1;Name=HIH2188862.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343902.1;locus_tag=ACYKJH_000728;product=amino acid ABC transporter permease;protein_id=HIH2188862.1;transl_table=11 DBLQKK010000008.1 tpg gene 32877 33578 . - . ID=gene-ACYKJH_000729;Name=ACYKJH_000729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000729 DBLQKK010000008.1 Protein Homology CDS 32877 33578 . - 0 ID=cds-HIH2188863.1;Parent=gene-ACYKJH_000729;Dbxref=NCBI_GP:HIH2188863.1;Name=HIH2188863.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343901.1;locus_tag=ACYKJH_000729;product=amino acid ABC transporter permease;protein_id=HIH2188863.1;transl_table=11 DBLQKK010000008.1 tpg gene 33593 34189 . - . ID=gene-ACYKJH_000730;Name=nssR;gbkey=Gene;gene=nssR;gene_biotype=protein_coding;locus_tag=ACYKJH_000730 DBLQKK010000008.1 Protein Homology CDS 33593 34189 . - 0 ID=cds-HIH2188864.1;Parent=gene-ACYKJH_000730;Dbxref=NCBI_GP:HIH2188864.1;Name=HIH2188864.1;gbkey=CDS;gene=nssR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343900.1;locus_tag=ACYKJH_000730;product=nitrosative stress-sensitive transcriptional regulator NssR;protein_id=HIH2188864.1;transl_table=11 DBLQKK010000008.1 tpg gene 34285 34668 . + . ID=gene-ACYKJH_000731;Name=ctb;gbkey=Gene;gene=ctb;gene_biotype=protein_coding;locus_tag=ACYKJH_000731 DBLQKK010000008.1 Protein Homology CDS 34285 34668 . + 0 ID=cds-HIH2188865.1;Parent=gene-ACYKJH_000731;Dbxref=NCBI_GP:HIH2188865.1;Name=HIH2188865.1;gbkey=CDS;gene=ctb;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343899.1;locus_tag=ACYKJH_000731;product=truncated hemoglobin Ctb;protein_id=HIH2188865.1;transl_table=11 DBLQKK010000008.1 tpg gene 34665 36488 . - . ID=gene-ACYKJH_000732;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=ACYKJH_000732 DBLQKK010000008.1 Protein Homology CDS 34665 36488 . - 0 ID=cds-HIH2188866.1;Parent=gene-ACYKJH_000732;Dbxref=NCBI_GP:HIH2188866.1;Name=HIH2188866.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;gene=recG;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343898.1;locus_tag=ACYKJH_000732;product=ATP-dependent DNA helicase RecG;protein_id=HIH2188866.1;transl_table=11 DBLQKK010000008.1 tpg gene 36478 37698 . - . ID=gene-ACYKJH_000733;Name=ACYKJH_000733;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000733 DBLQKK010000008.1 Protein Homology CDS 36478 37698 . - 0 ID=cds-HIH2188867.1;Parent=gene-ACYKJH_000733;Dbxref=NCBI_GP:HIH2188867.1;Name=HIH2188867.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343897.1;locus_tag=ACYKJH_000733;product=M16 family metallopeptidase;protein_id=HIH2188867.1;transl_table=11 DBLQKK010000008.1 tpg gene 37698 38744 . - . ID=gene-ACYKJH_000734;Name=ACYKJH_000734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000734 DBLQKK010000008.1 Protein Homology CDS 37698 38744 . - 0 ID=cds-HIH2188868.1;Parent=gene-ACYKJH_000734;Dbxref=NCBI_GP:HIH2188868.1;Name=HIH2188868.1;Ontology_term=GO:0009234,GO:0016765,GO:0051536;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343896.1;locus_tag=ACYKJH_000734;product=dehypoxanthine futalosine cyclase;protein_id=HIH2188868.1;transl_table=11 DBLQKK010000008.1 tpg gene 38819 40006 . + . ID=gene-ACYKJH_000735;Name=ACYKJH_000735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000735 DBLQKK010000008.1 Protein Homology CDS 38819 40006 . + 0 ID=cds-HIH2188869.1;Parent=gene-ACYKJH_000735;Dbxref=NCBI_GP:HIH2188869.1;Name=HIH2188869.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343895.1;locus_tag=ACYKJH_000735;product=MFS transporter;protein_id=HIH2188869.1;transl_table=11 DBLQKK010000008.1 tpg gene 40022 41110 . - . ID=gene-ACYKJH_000736;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=ACYKJH_000736 DBLQKK010000008.1 Protein Homology CDS 40022 41110 . - 0 ID=cds-HIH2188870.1;Parent=gene-ACYKJH_000736;Dbxref=NCBI_GP:HIH2188870.1;Name=HIH2188870.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343894.1;locus_tag=ACYKJH_000736;product=transcription termination factor NusA;protein_id=HIH2188870.1;transl_table=11 DBLQKK010000008.1 tpg gene 41237 41479 . + . ID=gene-ACYKJH_000737;Name=ACYKJH_000737;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000737 DBLQKK010000008.1 Protein Homology CDS 41237 41479 . + 0 ID=cds-HIH2188871.1;Parent=gene-ACYKJH_000737;Dbxref=NCBI_GP:HIH2188871.1;Name=HIH2188871.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002851103.1;locus_tag=ACYKJH_000737;product=HP0268 family nuclease;protein_id=HIH2188871.1;transl_table=11 DBLQKK010000008.1 tpg gene 41476 42777 . + . ID=gene-ACYKJH_000738;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=ACYKJH_000738 DBLQKK010000008.1 Protein Homology CDS 41476 42777 . + 0 ID=cds-HIH2188872.1;Parent=gene-ACYKJH_000738;Dbxref=NCBI_GP:HIH2188872.1;Name=HIH2188872.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343892.1;locus_tag=ACYKJH_000738;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=HIH2188872.1;transl_table=11 DBLQKK010000008.1 tpg gene 42761 43390 . + . ID=gene-ACYKJH_000739;Name=ACYKJH_000739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000739 DBLQKK010000008.1 Protein Homology CDS 42761 43390 . + 0 ID=cds-HIH2188873.1;Parent=gene-ACYKJH_000739;Dbxref=NCBI_GP:HIH2188873.1;Name=HIH2188873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343891.1;locus_tag=ACYKJH_000739;product=lysophospholipid acyltransferase family protein;protein_id=HIH2188873.1;transl_table=11 DBLQKK010000008.1 tpg gene 43392 44351 . + . ID=gene-ACYKJH_000740;Name=ACYKJH_000740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000740 DBLQKK010000008.1 Protein Homology CDS 43392 44351 . + 0 ID=cds-HIH2188874.1;Parent=gene-ACYKJH_000740;Dbxref=NCBI_GP:HIH2188874.1;Name=HIH2188874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343890.1;locus_tag=ACYKJH_000740;product=clan AA aspartic protease;protein_id=HIH2188874.1;transl_table=11 DBLQKK010000008.1 tpg gene 44348 44875 . + . ID=gene-ACYKJH_000741;Name=ACYKJH_000741;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000741 DBLQKK010000008.1 Protein Homology CDS 44348 44875 . + 0 ID=cds-HIH2188875.1;Parent=gene-ACYKJH_000741;Dbxref=NCBI_GP:HIH2188875.1;Name=HIH2188875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014516703.1;locus_tag=ACYKJH_000741;product=hypothetical protein;protein_id=HIH2188875.1;transl_table=11 DBLQKK010000008.1 tpg gene 44865 45383 . + . ID=gene-ACYKJH_000742;Name=ACYKJH_000742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000742 DBLQKK010000008.1 Protein Homology CDS 44865 45383 . + 0 ID=cds-HIH2188876.1;Parent=gene-ACYKJH_000742;Dbxref=NCBI_GP:HIH2188876.1;Name=HIH2188876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002857565.1;locus_tag=ACYKJH_000742;product=hypothetical protein;protein_id=HIH2188876.1;transl_table=11 DBLQKK010000008.1 tpg gene 45375 46667 . - . ID=gene-ACYKJH_000743;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=ACYKJH_000743 DBLQKK010000008.1 Protein Homology CDS 45375 46667 . - 0 ID=cds-HIH2188877.1;Parent=gene-ACYKJH_000743;Dbxref=NCBI_GP:HIH2188877.1;Name=HIH2188877.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343887.1;locus_tag=ACYKJH_000743;product=phosphomethylpyrimidine synthase ThiC;protein_id=HIH2188877.1;transl_table=11 DBLQKK010000008.1 cmsearch riboswitch 46724 46828 . - . ID=id-DBLQKK010000008.1:46724..46828;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch DBLQKK010000008.1 tpg gene 46842 47612 . - . ID=gene-ACYKJH_000744;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=ACYKJH_000744 DBLQKK010000008.1 Protein Homology CDS 46842 47612 . - 0 ID=cds-HIH2188878.1;Parent=gene-ACYKJH_000744;Dbxref=NCBI_GP:HIH2188878.1;Name=HIH2188878.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020246882.1;locus_tag=ACYKJH_000744;product=3'-5' exonuclease;protein_id=HIH2188878.1;transl_table=11 DBLQKK010000008.1 tpg gene 47609 48256 . - . ID=gene-ACYKJH_000745;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=ACYKJH_000745 DBLQKK010000008.1 Protein Homology CDS 47609 48256 . - 0 ID=cds-HIH2188879.1;Parent=gene-ACYKJH_000745;Dbxref=NCBI_GP:HIH2188879.1;Name=HIH2188879.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343885.1;locus_tag=ACYKJH_000745;product=ribulose-phosphate 3-epimerase;protein_id=HIH2188879.1;transl_table=11 DBLQKK010000008.1 tpg gene 48390 48584 . + . ID=gene-ACYKJH_000746;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=ACYKJH_000746 DBLQKK010000008.1 Protein Homology CDS 48390 48584 . + 0 ID=cds-HIH2188880.1;Parent=gene-ACYKJH_000746;Dbxref=NCBI_GP:HIH2188880.1;Name=HIH2188880.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343884.1;locus_tag=ACYKJH_000746;product=50S ribosomal protein L28;protein_id=HIH2188880.1;transl_table=11 DBLQKK010000008.1 tpg gene 48767 48982 . + . ID=gene-ACYKJH_000747;Name=ACYKJH_000747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000747 DBLQKK010000008.1 Protein Homology CDS 48767 48982 . + 0 ID=cds-HIH2188881.1;Parent=gene-ACYKJH_000747;Dbxref=NCBI_GP:HIH2188881.1;Name=HIH2188881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343883.1;locus_tag=ACYKJH_000747;product=YdcH family protein;protein_id=HIH2188881.1;transl_table=11 DBLQKK010000008.1 tpg pseudogene 49403 49651 . + . ID=gene-ACYKJH_000748;Name=ACYKJH_000748;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_000748;pseudo=true DBLQKK010000008.1 Protein Homology CDS 49403 49651 . + 0 ID=cds-ACYKJH_000748;Parent=gene-ACYKJH_000748;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF012245.6;locus_tag=ACYKJH_000748;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 DBLQKK010000008.1 tpg gene 49655 50089 . + . ID=gene-ACYKJH_000749;Name=ACYKJH_000749;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000749 DBLQKK010000008.1 Protein Homology CDS 49655 50089 . + 0 ID=cds-HIH2188882.1;Parent=gene-ACYKJH_000749;Dbxref=NCBI_GP:HIH2188882.1;Name=HIH2188882.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025062.6;locus_tag=ACYKJH_000749;product=CZB domain-containing protein;protein_id=HIH2188882.1;transl_table=11 DBLQKK010000008.1 tpg gene 50121 50717 . - . ID=gene-ACYKJH_000750;Name=ACYKJH_000750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000750 DBLQKK010000008.1 Protein Homology CDS 50121 50717 . - 0 ID=cds-HIH2188883.1;Parent=gene-ACYKJH_000750;Dbxref=NCBI_GP:HIH2188883.1;Name=HIH2188883.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343881.1;locus_tag=ACYKJH_000750;product=NUDIX domain-containing protein;protein_id=HIH2188883.1;transl_table=11 DBLQKK010000008.1 tpg pseudogene 50800 52871 . - . ID=gene-ACYKJH_000751;Name=ACYKJH_000751;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_000751;pseudo=true DBLQKK010000008.1 Protein Homology CDS 50800 52871 . - 0 ID=cds-ACYKJH_000751;Parent=gene-ACYKJH_000751;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002933079.1;locus_tag=ACYKJH_000751;product=TonB-dependent receptor domain-containing protein;pseudo=true;transl_table=11 DBLQKK010000008.1 tpg gene 53005 53943 . - . ID=gene-ACYKJH_000752;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=ACYKJH_000752 DBLQKK010000008.1 Protein Homology CDS 53005 53943 . - 0 ID=cds-HIH2188884.1;Parent=gene-ACYKJH_000752;Dbxref=NCBI_GP:HIH2188884.1;Name=HIH2188884.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343880.1;locus_tag=ACYKJH_000752;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=HIH2188884.1;transl_table=11 DBLQKK010000008.1 tpg gene 53945 55159 . - . ID=gene-ACYKJH_000753;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=ACYKJH_000753 DBLQKK010000008.1 Protein Homology CDS 53945 55159 . - 0 ID=cds-HIH2188885.1;Parent=gene-ACYKJH_000753;Dbxref=NCBI_GP:HIH2188885.1;Name=HIH2188885.1;Ontology_term=GO:0006633,GO:0016747;gbkey=CDS;gene=fabF;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343879.1;locus_tag=ACYKJH_000753;product=beta-ketoacyl-ACP synthase II;protein_id=HIH2188885.1;transl_table=11 DBLQKK010000008.1 tpg gene 55186 55419 . - . ID=gene-ACYKJH_000754;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=ACYKJH_000754 DBLQKK010000008.1 Protein Homology CDS 55186 55419 . - 0 ID=cds-HIH2188886.1;Parent=gene-ACYKJH_000754;Dbxref=NCBI_GP:HIH2188886.1;Name=HIH2188886.1;Ontology_term=GO:0006633,GO:0000036;gbkey=CDS;gene=acpP;go_function=acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343878.1;locus_tag=ACYKJH_000754;product=acyl carrier protein;protein_id=HIH2188886.1;transl_table=11 DBLQKK010000008.1 tpg gene 55529 56197 . + . ID=gene-ACYKJH_000755;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=protein_coding;locus_tag=ACYKJH_000755 DBLQKK010000008.1 Protein Homology CDS 55529 56197 . + 0 ID=cds-HIH2188887.1;Parent=gene-ACYKJH_000755;Dbxref=NCBI_GP:HIH2188887.1;Name=HIH2188887.1;Ontology_term=GO:0006772,GO:0050334;gbkey=CDS;gene=tenA;go_function=thiaminase activity|0050334||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343877.1;locus_tag=ACYKJH_000755;product=thiaminase II;protein_id=HIH2188887.1;transl_table=11 DBLQKK010000008.1 tpg gene 56221 57078 . - . ID=gene-ACYKJH_000756;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=ACYKJH_000756 DBLQKK010000008.1 Protein Homology CDS 56221 57078 . - 0 ID=cds-HIH2188888.1;Parent=gene-ACYKJH_000756;Dbxref=NCBI_GP:HIH2188888.1;Name=HIH2188888.1;Ontology_term=GO:0016491;gbkey=CDS;gene=sdhE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343876.1;locus_tag=ACYKJH_000756;product=8-methylmenaquinol:fumarate reductase membrane anchor subunit;protein_id=HIH2188888.1;transl_table=11 DBLQKK010000008.1 tpg gene 57082 58047 . - . ID=gene-ACYKJH_000757;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=ACYKJH_000757 DBLQKK010000008.1 Protein Homology CDS 57082 58047 . - 0 ID=cds-HIH2188889.1;Parent=gene-ACYKJH_000757;Dbxref=NCBI_GP:HIH2188889.1;Name=HIH2188889.1;Ontology_term=GO:0006099,GO:0009055;gbkey=CDS;gene=sdhB;go_function=electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343875.1;locus_tag=ACYKJH_000757;product=8-methylmenaquinol:fumarate reductase iron-sulfur subunit;protein_id=HIH2188889.1;transl_table=11 DBLQKK010000008.1 tpg gene 58044 59879 . - . ID=gene-ACYKJH_000758;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=ACYKJH_000758 DBLQKK010000008.1 Protein Homology CDS 58044 59879 . - 0 ID=cds-HIH2188890.1;Parent=gene-ACYKJH_000758;Dbxref=NCBI_GP:HIH2188890.1;Name=HIH2188890.1;Ontology_term=GO:0022900,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343874.1;locus_tag=ACYKJH_000758;product=8-methylmenaquinol:fumarate reductase flavoprotein subunit;protein_id=HIH2188890.1;transl_table=11 DBLQKK010000008.1 tpg gene 60217 60627 . - . ID=gene-ACYKJH_000759;Name=ACYKJH_000759;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000759 DBLQKK010000008.1 Protein Homology CDS 60217 60627 . - 0 ID=cds-HIH2188891.1;Parent=gene-ACYKJH_000759;Dbxref=NCBI_GP:HIH2188891.1;Name=HIH2188891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343873.1;locus_tag=ACYKJH_000759;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=HIH2188891.1;transl_table=11 DBLQKK010000008.1 tpg gene 60634 61377 . - . ID=gene-ACYKJH_000760;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=ACYKJH_000760 DBLQKK010000008.1 Protein Homology CDS 60634 61377 . - 0 ID=cds-HIH2188892.1;Parent=gene-ACYKJH_000760;Dbxref=NCBI_GP:HIH2188892.1;Name=HIH2188892.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fabG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343872.1;locus_tag=ACYKJH_000760;product=3-oxoacyl-ACP reductase FabG;protein_id=HIH2188892.1;transl_table=11 DBLQKK010000008.1 tpg gene 61367 61465 . - . ID=gene-ACYKJH_000761;Name=ACYKJH_000761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000761 DBLQKK010000008.1 Protein Homology CDS 61367 61465 . - 0 ID=cds-HIH2188893.1;Parent=gene-ACYKJH_000761;Dbxref=NCBI_GP:HIH2188893.1;Name=HIH2188893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002869268.1;locus_tag=ACYKJH_000761;product=3-ketoacyl-ACP reductase;protein_id=HIH2188893.1;transl_table=11 DBLQKK010000008.1 tpg gene 61449 62927 . - . ID=gene-ACYKJH_000762;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=protein_coding;locus_tag=ACYKJH_000762 DBLQKK010000008.1 Protein Homology CDS 61449 62927 . - 0 ID=cds-HIH2188894.1;Parent=gene-ACYKJH_000762;Dbxref=NCBI_GP:HIH2188894.1;Name=HIH2188894.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmI;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343871.1;locus_tag=ACYKJH_000762;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=HIH2188894.1;transl_table=11 DBLQKK010000008.1 tpg gene 63007 64068 . + . ID=gene-ACYKJH_000763;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=ACYKJH_000763 DBLQKK010000008.1 Protein Homology CDS 63007 64068 . + 0 ID=cds-HIH2188895.1;Parent=gene-ACYKJH_000763;Dbxref=NCBI_GP:HIH2188895.1;Name=HIH2188895.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343870.1;locus_tag=ACYKJH_000763;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=HIH2188895.1;transl_table=11 DBLQKK010000008.1 tpg gene 64068 65276 . + . ID=gene-ACYKJH_000764;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=ACYKJH_000764 DBLQKK010000008.1 Protein Homology CDS 64068 65276 . + 0 ID=cds-HIH2188896.1;Parent=gene-ACYKJH_000764;Dbxref=NCBI_GP:HIH2188896.1;Name=HIH2188896.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343869.1;locus_tag=ACYKJH_000764;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=HIH2188896.1;transl_table=11 DBLQKK010000008.1 tpg gene 65473 65589 . - . ID=gene-ACYKJH_000765;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=ACYKJH_000765 DBLQKK010000008.1 cmsearch rRNA 65473 65589 . - . ID=rna-ACYKJH_000765;Parent=gene-ACYKJH_000765;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKJH_000765;product=5S ribosomal RNA DBLQKK010000008.1 cmsearch exon 65473 65589 . - . ID=exon-ACYKJH_000765-1;Parent=rna-ACYKJH_000765;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKJH_000765;product=5S ribosomal RNA ##sequence-region DBLQKK010000009.1 1 61198 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000009.1 tpg region 1 61198 . + . ID=DBLQKK010000009.1:1..61198;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000009.1 tpg gene 83 367 . + . ID=gene-ACYKJH_000766;Name=ACYKJH_000766;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000766 DBLQKK010000009.1 Protein Homology CDS 83 367 . + 0 ID=cds-HIH2188897.1;Parent=gene-ACYKJH_000766;Dbxref=NCBI_GP:HIH2188897.1;Name=HIH2188897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343771.1;locus_tag=ACYKJH_000766;product=DUF362 domain-containing protein;protein_id=HIH2188897.1;transl_table=11 DBLQKK010000009.1 tpg gene 480 893 . + . ID=gene-ACYKJH_000767;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=ACYKJH_000767 DBLQKK010000009.1 Protein Homology CDS 480 893 . + 0 ID=cds-HIH2188898.1;Parent=gene-ACYKJH_000767;Dbxref=NCBI_GP:HIH2188898.1;Name=HIH2188898.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343770.1;locus_tag=ACYKJH_000767;product=nucleoside-diphosphate kinase;protein_id=HIH2188898.1;transl_table=11 DBLQKK010000009.1 tpg gene 894 1247 . + . ID=gene-ACYKJH_000768;Name=ACYKJH_000768;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000768 DBLQKK010000009.1 Protein Homology CDS 894 1247 . + 0 ID=cds-HIH2188899.1;Parent=gene-ACYKJH_000768;Dbxref=NCBI_GP:HIH2188899.1;Name=HIH2188899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343769.1;locus_tag=ACYKJH_000768;product=hypothetical protein;protein_id=HIH2188899.1;transl_table=11 DBLQKK010000009.1 tpg gene 1272 1418 . + . ID=gene-ACYKJH_000769;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=ACYKJH_000769 DBLQKK010000009.1 Protein Homology CDS 1272 1418 . + 0 ID=cds-HIH2188900.1;Parent=gene-ACYKJH_000769;Dbxref=NCBI_GP:HIH2188900.1;Name=HIH2188900.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343768.1;locus_tag=ACYKJH_000769;product=50S ribosomal protein L32;protein_id=HIH2188900.1;transl_table=11 DBLQKK010000009.1 tpg gene 1424 2410 . + . ID=gene-ACYKJH_000770;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=ACYKJH_000770 DBLQKK010000009.1 Protein Homology CDS 1424 2410 . + 0 ID=cds-HIH2188901.1;Parent=gene-ACYKJH_000770;Dbxref=NCBI_GP:HIH2188901.1;Name=HIH2188901.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343767.1;locus_tag=ACYKJH_000770;product=phosphate acyltransferase PlsX;protein_id=HIH2188901.1;transl_table=11 DBLQKK010000009.1 tpg gene 2403 3377 . + . ID=gene-ACYKJH_000771;Name=ACYKJH_000771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000771 DBLQKK010000009.1 Protein Homology CDS 2403 3377 . + 0 ID=cds-HIH2188902.1;Parent=gene-ACYKJH_000771;Dbxref=NCBI_GP:HIH2188902.1;Name=HIH2188902.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343766.1;locus_tag=ACYKJH_000771;product=beta-ketoacyl-ACP synthase III;protein_id=HIH2188902.1;transl_table=11 DBLQKK010000009.1 tpg gene 3374 3724 . - . ID=gene-ACYKJH_000772;Name=ACYKJH_000772;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000772 DBLQKK010000009.1 Protein Homology CDS 3374 3724 . - 0 ID=cds-HIH2188903.1;Parent=gene-ACYKJH_000772;Dbxref=NCBI_GP:HIH2188903.1;Name=HIH2188903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343765.1;locus_tag=ACYKJH_000772;product=RidA family protein;protein_id=HIH2188903.1;transl_table=11 DBLQKK010000009.1 tpg gene 3721 4797 . - . ID=gene-ACYKJH_000773;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=ACYKJH_000773 DBLQKK010000009.1 Protein Homology CDS 3721 4797 . - 0 ID=cds-HIH2188904.1;Parent=gene-ACYKJH_000773;Dbxref=NCBI_GP:HIH2188904.1;Name=HIH2188904.1;Ontology_term=GO:0006564,GO:0004648;gbkey=CDS;gene=serC;go_function=O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343764.1;locus_tag=ACYKJH_000773;product=phosphoserine transaminase;protein_id=HIH2188904.1;transl_table=11 DBLQKK010000009.1 tpg gene 4807 5970 . - . ID=gene-ACYKJH_000774;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=ACYKJH_000774 DBLQKK010000009.1 Protein Homology CDS 4807 5970 . - 0 ID=cds-HIH2188905.1;Parent=gene-ACYKJH_000774;Dbxref=NCBI_GP:HIH2188905.1;Name=HIH2188905.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343763.1;locus_tag=ACYKJH_000774;product=exodeoxyribonuclease VII large subunit;protein_id=HIH2188905.1;transl_table=11 DBLQKK010000009.1 tpg gene 5967 6674 . - . ID=gene-ACYKJH_000775;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=ACYKJH_000775 DBLQKK010000009.1 Protein Homology CDS 5967 6674 . - 0 ID=cds-HIH2188906.1;Parent=gene-ACYKJH_000775;Dbxref=NCBI_GP:HIH2188906.1;Name=HIH2188906.1;Ontology_term=GO:0042372,GO:0052624;gbkey=CDS;gene=ubiE;go_function=2-phytyl-1%2C4-naphthoquinone methyltransferase activity|0052624||IEA;go_process=phylloquinone biosynthetic process|0042372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343762.1;locus_tag=ACYKJH_000775;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=HIH2188906.1;transl_table=11 DBLQKK010000009.1 tpg gene 6677 7873 . - . ID=gene-ACYKJH_000776;Name=ACYKJH_000776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000776 DBLQKK010000009.1 Protein Homology CDS 6677 7873 . - 0 ID=cds-HIH2188907.1;Parent=gene-ACYKJH_000776;Dbxref=NCBI_GP:HIH2188907.1;Name=HIH2188907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343761.1;locus_tag=ACYKJH_000776;product=hypothetical protein;protein_id=HIH2188907.1;transl_table=11 DBLQKK010000009.1 tpg gene 7919 8329 . - . ID=gene-ACYKJH_000777;Name=perR;gbkey=Gene;gene=perR;gene_biotype=protein_coding;locus_tag=ACYKJH_000777 DBLQKK010000009.1 Protein Homology CDS 7919 8329 . - 0 ID=cds-HIH2188908.1;Parent=gene-ACYKJH_000777;Dbxref=NCBI_GP:HIH2188908.1;Name=HIH2188908.1;gbkey=CDS;gene=perR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343760.1;locus_tag=ACYKJH_000777;product=peroxide-responsive transcriptional repressor PerR;protein_id=HIH2188908.1;transl_table=11 DBLQKK010000009.1 tpg gene 8415 10262 . - . ID=gene-ACYKJH_000778;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=ACYKJH_000778 DBLQKK010000009.1 Protein Homology CDS 8415 10262 . - 0 ID=cds-HIH2188909.1;Parent=gene-ACYKJH_000778;Dbxref=NCBI_GP:HIH2188909.1;Name=HIH2188909.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343759.1;locus_tag=ACYKJH_000778;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=HIH2188909.1;transl_table=11 DBLQKK010000009.1 tpg gene 10255 11085 . - . ID=gene-ACYKJH_000779;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=ACYKJH_000779 DBLQKK010000009.1 Protein Homology CDS 10255 11085 . - 0 ID=cds-HIH2188910.1;Parent=gene-ACYKJH_000779;Dbxref=NCBI_GP:HIH2188910.1;Name=HIH2188910.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343758.1;locus_tag=ACYKJH_000779;product=flagellar assembly protein FliH;protein_id=HIH2188910.1;transl_table=11 DBLQKK010000009.1 tpg gene 11093 12121 . - . ID=gene-ACYKJH_000780;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=ACYKJH_000780 DBLQKK010000009.1 Protein Homology CDS 11093 12121 . - 0 ID=cds-HIH2188911.1;Parent=gene-ACYKJH_000780;Dbxref=NCBI_GP:HIH2188911.1;Name=HIH2188911.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343757.1;locus_tag=ACYKJH_000780;product=flagellar motor switch protein FliG;protein_id=HIH2188911.1;transl_table=11 DBLQKK010000009.1 tpg gene 12121 13803 . - . ID=gene-ACYKJH_000781;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=ACYKJH_000781 DBLQKK010000009.1 Protein Homology CDS 12121 13803 . - 0 ID=cds-HIH2188912.1;Parent=gene-ACYKJH_000781;Dbxref=NCBI_GP:HIH2188912.1;Name=HIH2188912.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343756.1;locus_tag=ACYKJH_000781;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=HIH2188912.1;transl_table=11 DBLQKK010000009.1 tpg gene 13855 14949 . - . ID=gene-ACYKJH_000782;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=ACYKJH_000782 DBLQKK010000009.1 Protein Homology CDS 13855 14949 . - 0 ID=cds-HIH2188913.1;Parent=gene-ACYKJH_000782;Dbxref=NCBI_GP:HIH2188913.1;Name=HIH2188913.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343755.1;locus_tag=ACYKJH_000782;product=histidinol-phosphate transaminase;protein_id=HIH2188913.1;transl_table=11 DBLQKK010000009.1 tpg gene 14939 16012 . - . ID=gene-ACYKJH_000783;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=ACYKJH_000783 DBLQKK010000009.1 Protein Homology CDS 14939 16012 . - 0 ID=cds-HIH2188914.1;Parent=gene-ACYKJH_000783;Dbxref=NCBI_GP:HIH2188914.1;Name=HIH2188914.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343754.1;locus_tag=ACYKJH_000783;product=prephenate dehydratase;protein_id=HIH2188914.1;transl_table=11 DBLQKK010000009.1 tpg gene 16000 16767 . - . ID=gene-ACYKJH_000784;Name=ACYKJH_000784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000784 DBLQKK010000009.1 Protein Homology CDS 16000 16767 . - 0 ID=cds-HIH2188915.1;Parent=gene-ACYKJH_000784;Dbxref=NCBI_GP:HIH2188915.1;Name=HIH2188915.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343753.1;locus_tag=ACYKJH_000784;product=HAD-IIA family hydrolase;protein_id=HIH2188915.1;transl_table=11 DBLQKK010000009.1 tpg gene 16769 17977 . - . ID=gene-ACYKJH_000785;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=ACYKJH_000785 DBLQKK010000009.1 Protein Homology CDS 16769 17977 . - 0 ID=cds-HIH2188916.1;Parent=gene-ACYKJH_000785;Dbxref=NCBI_GP:HIH2188916.1;Name=HIH2188916.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343752.1;locus_tag=ACYKJH_000785;product=diaminopimelate decarboxylase;protein_id=HIH2188916.1;transl_table=11 DBLQKK010000009.1 tpg gene 18021 19079 . - . ID=gene-ACYKJH_000786;Name=ACYKJH_000786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000786 DBLQKK010000009.1 Protein Homology CDS 18021 19079 . - 0 ID=cds-HIH2188917.1;Parent=gene-ACYKJH_000786;Dbxref=NCBI_GP:HIH2188917.1;Name=HIH2188917.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343751.1;locus_tag=ACYKJH_000786;product=LptF/LptG family permease;protein_id=HIH2188917.1;transl_table=11 DBLQKK010000009.1 tpg gene 19081 19626 . - . ID=gene-ACYKJH_000787;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=ACYKJH_000787 DBLQKK010000009.1 Protein Homology CDS 19081 19626 . - 0 ID=cds-HIH2188918.1;Parent=gene-ACYKJH_000787;Dbxref=NCBI_GP:HIH2188918.1;Name=HIH2188918.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343750.1;locus_tag=ACYKJH_000787;product=aminoacyl-tRNA hydrolase;protein_id=HIH2188918.1;transl_table=11 DBLQKK010000009.1 tpg gene 19623 20159 . - . ID=gene-ACYKJH_000788;Name=ACYKJH_000788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000788 DBLQKK010000009.1 Protein Homology CDS 19623 20159 . - 0 ID=cds-HIH2188919.1;Parent=gene-ACYKJH_000788;Dbxref=NCBI_GP:HIH2188919.1;Name=HIH2188919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343749.1;locus_tag=ACYKJH_000788;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=HIH2188919.1;transl_table=11 DBLQKK010000009.1 tpg gene 20293 20631 . + . ID=gene-ACYKJH_000789;Name=ACYKJH_000789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000789 DBLQKK010000009.1 Protein Homology CDS 20293 20631 . + 0 ID=cds-HIH2188920.1;Parent=gene-ACYKJH_000789;Dbxref=NCBI_GP:HIH2188920.1;Name=HIH2188920.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343748.1;locus_tag=ACYKJH_000789;product=DMT family transporter;protein_id=HIH2188920.1;transl_table=11 DBLQKK010000009.1 tpg gene 20634 20948 . + . ID=gene-ACYKJH_000790;Name=ACYKJH_000790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000790 DBLQKK010000009.1 Protein Homology CDS 20634 20948 . + 0 ID=cds-HIH2188921.1;Parent=gene-ACYKJH_000790;Dbxref=NCBI_GP:HIH2188921.1;Name=HIH2188921.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343747.1;locus_tag=ACYKJH_000790;product=DMT family transporter;protein_id=HIH2188921.1;transl_table=11 DBLQKK010000009.1 tpg gene 20958 21563 . + . ID=gene-ACYKJH_000791;Name=ACYKJH_000791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000791 DBLQKK010000009.1 Protein Homology CDS 20958 21563 . + 0 ID=cds-HIH2188922.1;Parent=gene-ACYKJH_000791;Dbxref=NCBI_GP:HIH2188922.1;Name=HIH2188922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343746.1;locus_tag=ACYKJH_000791;product=dethiobiotin synthase;protein_id=HIH2188922.1;transl_table=11 DBLQKK010000009.1 tpg gene 21550 22833 . - . ID=gene-ACYKJH_000792;Name=ACYKJH_000792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000792 DBLQKK010000009.1 Protein Homology CDS 21550 22833 . - 0 ID=cds-HIH2188923.1;Parent=gene-ACYKJH_000792;Dbxref=NCBI_GP:HIH2188923.1;Name=HIH2188923.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343745.1;locus_tag=ACYKJH_000792;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=HIH2188923.1;transl_table=11 DBLQKK010000009.1 tpg gene 22901 24043 . + . ID=gene-ACYKJH_000793;Name=ACYKJH_000793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000793 DBLQKK010000009.1 Protein Homology CDS 22901 24043 . + 0 ID=cds-HIH2188924.1;Parent=gene-ACYKJH_000793;Dbxref=NCBI_GP:HIH2188924.1;Name=HIH2188924.1;Ontology_term=GO:0016747,GO:0030170;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343744.1;locus_tag=ACYKJH_000793;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=HIH2188924.1;transl_table=11 DBLQKK010000009.1 tpg gene 24040 24651 . + . ID=gene-ACYKJH_000794;Name=ACYKJH_000794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000794 DBLQKK010000009.1 Protein Homology CDS 24040 24651 . + 0 ID=cds-HIH2188925.1;Parent=gene-ACYKJH_000794;Dbxref=NCBI_GP:HIH2188925.1;Name=HIH2188925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343743.1;locus_tag=ACYKJH_000794;product=pimeloyl-ACP methyl esterase BioG family protein;protein_id=HIH2188925.1;transl_table=11 DBLQKK010000009.1 tpg gene 24648 25334 . + . ID=gene-ACYKJH_000795;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=ACYKJH_000795 DBLQKK010000009.1 Protein Homology CDS 24648 25334 . + 0 ID=cds-HIH2188926.1;Parent=gene-ACYKJH_000795;Dbxref=NCBI_GP:HIH2188926.1;Name=HIH2188926.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343742.1;locus_tag=ACYKJH_000795;product=malonyl-ACP O-methyltransferase BioC;protein_id=HIH2188926.1;transl_table=11 DBLQKK010000009.1 tpg gene 25385 26134 . + . ID=gene-ACYKJH_000796;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=ACYKJH_000796 DBLQKK010000009.1 Protein Homology CDS 25385 26134 . + 0 ID=cds-HIH2188927.1;Parent=gene-ACYKJH_000796;Dbxref=NCBI_GP:HIH2188927.1;Name=HIH2188927.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343741.1;locus_tag=ACYKJH_000796;product=molybdate ABC transporter substrate-binding protein;protein_id=HIH2188927.1;transl_table=11 DBLQKK010000009.1 tpg gene 26131 26532 . + . ID=gene-ACYKJH_000797;Name=ACYKJH_000797;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000797 DBLQKK010000009.1 Protein Homology CDS 26131 26532 . + 0 ID=cds-HIH2188928.1;Parent=gene-ACYKJH_000797;Dbxref=NCBI_GP:HIH2188928.1;Name=HIH2188928.1;Ontology_term=GO:0015689;gbkey=CDS;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343740.1;locus_tag=ACYKJH_000797;product=TOBE domain-containing protein;protein_id=HIH2188928.1;transl_table=11 DBLQKK010000009.1 tpg gene 26525 27199 . + . ID=gene-ACYKJH_000798;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=ACYKJH_000798 DBLQKK010000009.1 Protein Homology CDS 26525 27199 . + 0 ID=cds-HIH2188929.1;Parent=gene-ACYKJH_000798;Dbxref=NCBI_GP:HIH2188929.1;Name=HIH2188929.1;Ontology_term=GO:0015689,GO:0015412,GO:0005886,GO:0055052;gbkey=CDS;gene=modB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343739.1;locus_tag=ACYKJH_000798;product=molybdate ABC transporter permease subunit;protein_id=HIH2188929.1;transl_table=11 DBLQKK010000009.1 tpg gene 27196 28068 . + . ID=gene-ACYKJH_000799;Name=ACYKJH_000799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000799 DBLQKK010000009.1 Protein Homology CDS 27196 28068 . + 0 ID=cds-HIH2188930.1;Parent=gene-ACYKJH_000799;Dbxref=NCBI_GP:HIH2188930.1;Name=HIH2188930.1;Ontology_term=GO:0005524,GO:0015419,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002876877.1;locus_tag=ACYKJH_000799;product=sulfate/molybdate ABC transporter ATP-binding protein;protein_id=HIH2188930.1;transl_table=11 DBLQKK010000009.1 tpg gene 28081 28905 . - . ID=gene-ACYKJH_000800;Name=ACYKJH_000800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000800 DBLQKK010000009.1 Protein Homology CDS 28081 28905 . - 0 ID=cds-HIH2188931.1;Parent=gene-ACYKJH_000800;Dbxref=NCBI_GP:HIH2188931.1;Name=HIH2188931.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002792006.1;locus_tag=ACYKJH_000800;product=CPBP family intramembrane glutamic endopeptidase;protein_id=HIH2188931.1;transl_table=11 DBLQKK010000009.1 tpg gene 29011 29757 . - . ID=gene-ACYKJH_000801;Name=ACYKJH_000801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000801 DBLQKK010000009.1 Protein Homology CDS 29011 29757 . - 0 ID=cds-HIH2188932.1;Parent=gene-ACYKJH_000801;Dbxref=NCBI_GP:HIH2188932.1;Name=HIH2188932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002872405.1;locus_tag=ACYKJH_000801;product=OXA-184 family class D beta-lactamase OXA-184;protein_id=HIH2188932.1;transl_table=11 DBLQKK010000009.1 tpg gene 29793 29921 . - . ID=gene-ACYKJH_000802;Name=ACYKJH_000802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000802 DBLQKK010000009.1 GeneMarkS-2+ CDS 29793 29921 . - 0 ID=cds-HIH2188933.1;Parent=gene-ACYKJH_000802;Dbxref=NCBI_GP:HIH2188933.1;Name=HIH2188933.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_000802;product=hypothetical protein;protein_id=HIH2188933.1;transl_table=11 DBLQKK010000009.1 tpg gene 30069 30203 . - . ID=gene-ACYKJH_000803;Name=ACYKJH_000803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000803 DBLQKK010000009.1 GeneMarkS-2+ CDS 30069 30203 . - 0 ID=cds-HIH2188934.1;Parent=gene-ACYKJH_000803;Dbxref=NCBI_GP:HIH2188934.1;Name=HIH2188934.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_000803;product=hypothetical protein;protein_id=HIH2188934.1;transl_table=11 DBLQKK010000009.1 tpg gene 30187 30846 . - . ID=gene-ACYKJH_000804;Name=ACYKJH_000804;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000804 DBLQKK010000009.1 Protein Homology CDS 30187 30846 . - 0 ID=cds-HIH2188935.1;Parent=gene-ACYKJH_000804;Dbxref=NCBI_GP:HIH2188935.1;Name=HIH2188935.1;Ontology_term=GO:0005524,GO:0008641,GO:0061503;gbkey=CDS;go_function=ATP binding|0005524||IEA,ubiquitin-like modifier activating enzyme activity|0008641||IEA,tRNA threonylcarbamoyladenosine dehydratase|0061503||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343732.1;locus_tag=ACYKJH_000804;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=HIH2188935.1;transl_table=11 DBLQKK010000009.1 tpg gene 30836 31612 . - . ID=gene-ACYKJH_000805;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=ACYKJH_000805 DBLQKK010000009.1 Protein Homology CDS 30836 31612 . - 0 ID=cds-HIH2188936.1;Parent=gene-ACYKJH_000805;Dbxref=NCBI_GP:HIH2188936.1;Name=HIH2188936.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343731.1;locus_tag=ACYKJH_000805;product=5'/3'-nucleotidase SurE;protein_id=HIH2188936.1;transl_table=11 DBLQKK010000009.1 tpg gene 31867 32088 . + . ID=gene-ACYKJH_000806;Name=ACYKJH_000806;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000806 DBLQKK010000009.1 GeneMarkS-2+ CDS 31867 32088 . + 0 ID=cds-HIH2188937.1;Parent=gene-ACYKJH_000806;Dbxref=NCBI_GP:HIH2188937.1;Name=HIH2188937.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_000806;product=MFS transporter;protein_id=HIH2188937.1;transl_table=11 DBLQKK010000009.1 tpg gene 32079 33038 . + . ID=gene-ACYKJH_000807;Name=ACYKJH_000807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000807 DBLQKK010000009.1 Protein Homology CDS 32079 33038 . + 0 ID=cds-HIH2188938.1;Parent=gene-ACYKJH_000807;Dbxref=NCBI_GP:HIH2188938.1;Name=HIH2188938.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.6;locus_tag=ACYKJH_000807;product=MFS transporter;protein_id=HIH2188938.1;transl_table=11 DBLQKK010000009.1 tpg gene 33302 34054 . + . ID=gene-ACYKJH_000808;Name=peb3;gbkey=Gene;gene=peb3;gene_biotype=protein_coding;locus_tag=ACYKJH_000808 DBLQKK010000009.1 Protein Homology CDS 33302 34054 . + 0 ID=cds-HIH2188939.1;Parent=gene-ACYKJH_000808;Dbxref=NCBI_GP:HIH2188939.1;Name=HIH2188939.1;gbkey=CDS;gene=peb3;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343730.1;locus_tag=ACYKJH_000808;product=AcfC family glycoprotein adhesin PEB3;protein_id=HIH2188939.1;transl_table=11 DBLQKK010000009.1 tpg pseudogene 34153 37016 . + . ID=gene-ACYKJH_000809;Name=ACYKJH_000809;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_000809;pseudo=true DBLQKK010000009.1 Protein Homology CDS 34153 37016 . + 0 ID=cds-ACYKJH_000809;Parent=gene-ACYKJH_000809;Note=frameshifted;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002904025.1;locus_tag=ACYKJH_000809;product=DEAD/DEAH box helicase family protein;pseudo=true;transl_table=11 DBLQKK010000009.1 tpg pseudogene 37009 38849 . + . ID=gene-ACYKJH_000810;Name=ACYKJH_000810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_000810;pseudo=true DBLQKK010000009.1 Protein Homology CDS 37009 38849 . + 0 ID=cds-ACYKJH_000810;Parent=gene-ACYKJH_000810;Note=frameshifted;Ontology_term=GO:0006306,GO:0009307,GO:0003677,GO:0008168,GO:0008170,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,methyltransferase activity|0008168||IEA,N-methyltransferase activity|0008170||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=obsolete DNA methylation|0006306||IEA,DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004308388.1;locus_tag=ACYKJH_000810;product=site-specific DNA-methyltransferase;pseudo=true;transl_table=11 DBLQKK010000009.1 tpg gene 38851 40005 . + . ID=gene-ACYKJH_000811;Name=ACYKJH_000811;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000811 DBLQKK010000009.1 Protein Homology CDS 38851 40005 . + 0 ID=cds-HIH2188940.1;Parent=gene-ACYKJH_000811;Dbxref=NCBI_GP:HIH2188940.1;Name=HIH2188940.1;Ontology_term=GO:0004674,GO:0005524;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012298.6;locus_tag=ACYKJH_000811;product=serine/threonine-protein kinase;protein_id=HIH2188940.1;transl_table=11 DBLQKK010000009.1 tpg gene 40128 41222 . + . ID=gene-ACYKJH_000812;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=ACYKJH_000812 DBLQKK010000009.1 Protein Homology CDS 40128 41222 . + 0 ID=cds-HIH2188941.1;Parent=gene-ACYKJH_000812;Dbxref=NCBI_GP:HIH2188941.1;Name=HIH2188941.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343729.1;locus_tag=ACYKJH_000812;product=lipid-A-disaccharide synthase;protein_id=HIH2188941.1;transl_table=11 DBLQKK010000009.1 tpg gene 41234 41719 . + . ID=gene-ACYKJH_000813;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=ACYKJH_000813 DBLQKK010000009.1 Protein Homology CDS 41234 41719 . + 0 ID=cds-HIH2188942.1;Parent=gene-ACYKJH_000813;Dbxref=NCBI_GP:HIH2188942.1;Name=HIH2188942.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343728.1;locus_tag=ACYKJH_000813;product=transcription elongation factor GreA;protein_id=HIH2188942.1;transl_table=11 DBLQKK010000009.1 tpg gene 41729 42487 . + . ID=gene-ACYKJH_000814;Name=ACYKJH_000814;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000814 DBLQKK010000009.1 Protein Homology CDS 41729 42487 . + 0 ID=cds-HIH2188943.1;Parent=gene-ACYKJH_000814;Dbxref=NCBI_GP:HIH2188943.1;Name=HIH2188943.1;Ontology_term=GO:0009245,GO:0008758,GO:0046872;gbkey=CDS;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,metal ion binding|0046872||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012662069.1;locus_tag=ACYKJH_000814;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=HIH2188943.1;transl_table=11 DBLQKK010000009.1 tpg gene 42480 43436 . + . ID=gene-ACYKJH_000815;Name=cheV;gbkey=Gene;gene=cheV;gene_biotype=protein_coding;locus_tag=ACYKJH_000815 DBLQKK010000009.1 Protein Homology CDS 42480 43436 . + 0 ID=cds-HIH2188944.1;Parent=gene-ACYKJH_000815;Dbxref=NCBI_GP:HIH2188944.1;Name=HIH2188944.1;Ontology_term=GO:0000160,GO:0006935,GO:0000156;gbkey=CDS;gene=cheV;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343726.1;locus_tag=ACYKJH_000815;product=chemotaxis protein;protein_id=HIH2188944.1;transl_table=11 DBLQKK010000009.1 tpg gene 43440 45749 . + . ID=gene-ACYKJH_000816;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=ACYKJH_000816 DBLQKK010000009.1 Protein Homology CDS 43440 45749 . + 0 ID=cds-HIH2188945.1;Parent=gene-ACYKJH_000816;Dbxref=NCBI_GP:HIH2188945.1;Name=HIH2188945.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343725.1;locus_tag=ACYKJH_000816;product=hybrid sensor histidine kinase/response regulator;protein_id=HIH2188945.1;transl_table=11 DBLQKK010000009.1 tpg gene 45754 46275 . + . ID=gene-ACYKJH_000817;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=ACYKJH_000817 DBLQKK010000009.1 Protein Homology CDS 45754 46275 . + 0 ID=cds-HIH2188946.1;Parent=gene-ACYKJH_000817;Dbxref=NCBI_GP:HIH2188946.1;Name=HIH2188946.1;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;gene=cheW;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343724.1;locus_tag=ACYKJH_000817;product=chemotaxis protein CheW;protein_id=HIH2188946.1;transl_table=11 DBLQKK010000009.1 tpg gene 46275 46898 . + . ID=gene-ACYKJH_000818;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=ACYKJH_000818 DBLQKK010000009.1 Protein Homology CDS 46275 46898 . + 0 ID=cds-HIH2188947.1;Parent=gene-ACYKJH_000818;Dbxref=NCBI_GP:HIH2188947.1;Name=HIH2188947.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343723.1;locus_tag=ACYKJH_000818;product=phosphoserine phosphatase SerB;protein_id=HIH2188947.1;transl_table=11 DBLQKK010000009.1 tpg gene 46898 47875 . + . ID=gene-ACYKJH_000819;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=ACYKJH_000819 DBLQKK010000009.1 Protein Homology CDS 46898 47875 . + 0 ID=cds-HIH2188948.1;Parent=gene-ACYKJH_000819;Dbxref=NCBI_GP:HIH2188948.1;Name=HIH2188948.1;gbkey=CDS;gene=tal;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343722.1;locus_tag=ACYKJH_000819;product=transaldolase;protein_id=HIH2188948.1;transl_table=11 DBLQKK010000009.1 tpg gene 47876 48298 . - . ID=gene-ACYKJH_000820;Name=ACYKJH_000820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000820 DBLQKK010000009.1 Protein Homology CDS 47876 48298 . - 0 ID=cds-HIH2188949.1;Parent=gene-ACYKJH_000820;Dbxref=NCBI_GP:HIH2188949.1;Name=HIH2188949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343721.1;locus_tag=ACYKJH_000820;product=Sua5 YciO YrdC YwlC family protein;protein_id=HIH2188949.1;transl_table=11 DBLQKK010000009.1 tpg gene 48295 51564 . - . ID=gene-ACYKJH_000821;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=ACYKJH_000821 DBLQKK010000009.1 Protein Homology CDS 48295 51564 . - 0 ID=cds-HIH2188950.1;Parent=gene-ACYKJH_000821;Dbxref=NCBI_GP:HIH2188950.1;Name=HIH2188950.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343720.1;locus_tag=ACYKJH_000821;product=carbamoyl-phosphate synthase large subunit;protein_id=HIH2188950.1;transl_table=11 DBLQKK010000009.1 tpg gene 51825 52574 . - . ID=gene-ACYKJH_000822;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=ACYKJH_000822 DBLQKK010000009.1 Protein Homology CDS 51825 52574 . - 0 ID=cds-HIH2188951.1;Parent=gene-ACYKJH_000822;Dbxref=NCBI_GP:HIH2188951.1;Name=HIH2188951.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343719.1;locus_tag=ACYKJH_000822;product=rod shape-determining protein MreC;protein_id=HIH2188951.1;transl_table=11 DBLQKK010000009.1 tpg gene 52564 53604 . - . ID=gene-ACYKJH_000823;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=ACYKJH_000823 DBLQKK010000009.1 Protein Homology CDS 52564 53604 . - 0 ID=cds-HIH2188952.1;Parent=gene-ACYKJH_000823;Dbxref=NCBI_GP:HIH2188952.1;Name=HIH2188952.1;Ontology_term=GO:0000902,GO:0008360,GO:0005524,GO:0005737;gbkey=CDS;gene=mreB;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA;go_process=cell morphogenesis|0000902||IEA,regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343718.1;locus_tag=ACYKJH_000823;product=rod shape-determining protein;protein_id=HIH2188952.1;transl_table=11 DBLQKK010000009.1 tpg gene 53615 54838 . - . ID=gene-ACYKJH_000824;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=ACYKJH_000824 DBLQKK010000009.1 Protein Homology CDS 53615 54838 . - 0 ID=cds-HIH2188953.1;Parent=gene-ACYKJH_000824;Dbxref=NCBI_GP:HIH2188953.1;Name=HIH2188953.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936863.1;locus_tag=ACYKJH_000824;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=HIH2188953.1;transl_table=11 DBLQKK010000009.1 tpg gene 54831 55622 . - . ID=gene-ACYKJH_000825;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=ACYKJH_000825 DBLQKK010000009.1 Protein Homology CDS 54831 55622 . - 0 ID=cds-HIH2188954.1;Parent=gene-ACYKJH_000825;Dbxref=NCBI_GP:HIH2188954.1;Name=HIH2188954.1;Ontology_term=GO:0009245,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343716.1;locus_tag=ACYKJH_000825;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=HIH2188954.1;transl_table=11 DBLQKK010000009.1 tpg gene 55622 56062 . - . ID=gene-ACYKJH_000826;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=ACYKJH_000826 DBLQKK010000009.1 Protein Homology CDS 55622 56062 . - 0 ID=cds-HIH2188955.1;Parent=gene-ACYKJH_000826;Dbxref=NCBI_GP:HIH2188955.1;Name=HIH2188955.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343715.1;locus_tag=ACYKJH_000826;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=HIH2188955.1;transl_table=11 DBLQKK010000009.1 tpg gene 56157 57236 . - . ID=gene-ACYKJH_000827;Name=ACYKJH_000827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000827 DBLQKK010000009.1 Protein Homology CDS 56157 57236 . - 0 ID=cds-HIH2188956.1;Parent=gene-ACYKJH_000827;Dbxref=NCBI_GP:HIH2188956.1;Name=HIH2188956.1;Ontology_term=GO:0008033,GO:0008616,GO:0046872,GO:0051539,GO:0052693;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343714.1;locus_tag=ACYKJH_000827;product=epoxyqueuosine reductase QueH;protein_id=HIH2188956.1;transl_table=11 DBLQKK010000009.1 tpg gene 57236 57691 . - . ID=gene-ACYKJH_000828;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=ACYKJH_000828 DBLQKK010000009.1 Protein Homology CDS 57236 57691 . - 0 ID=cds-HIH2188957.1;Parent=gene-ACYKJH_000828;Dbxref=NCBI_GP:HIH2188957.1;Name=HIH2188957.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343713.1;locus_tag=ACYKJH_000828;product=thioredoxin-dependent thiol peroxidase;protein_id=HIH2188957.1;transl_table=11 DBLQKK010000009.1 tpg gene 57688 57894 . - . ID=gene-ACYKJH_000829;Name=ACYKJH_000829;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000829 DBLQKK010000009.1 Protein Homology CDS 57688 57894 . - 0 ID=cds-HIH2188958.1;Parent=gene-ACYKJH_000829;Dbxref=NCBI_GP:HIH2188958.1;Name=HIH2188958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343712.1;locus_tag=ACYKJH_000829;product=4-oxalocrotonate tautomerase family protein;protein_id=HIH2188958.1;transl_table=11 DBLQKK010000009.1 tpg gene 58069 58983 . + . ID=gene-ACYKJH_000830;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=ACYKJH_000830 DBLQKK010000009.1 Protein Homology CDS 58069 58983 . + 0 ID=cds-HIH2188959.1;Parent=gene-ACYKJH_000830;Dbxref=NCBI_GP:HIH2188959.1;Name=HIH2188959.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343711.1;locus_tag=ACYKJH_000830;product=branched-chain-amino-acid transaminase;protein_id=HIH2188959.1;transl_table=11 DBLQKK010000009.1 tpg gene 58996 60084 . + . ID=gene-ACYKJH_000831;Name=ACYKJH_000831;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000831 DBLQKK010000009.1 Protein Homology CDS 58996 60084 . + 0 ID=cds-HIH2188960.1;Parent=gene-ACYKJH_000831;Dbxref=NCBI_GP:HIH2188960.1;Name=HIH2188960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343710.1;locus_tag=ACYKJH_000831;product=SPFH domain-containing protein;protein_id=HIH2188960.1;transl_table=11 DBLQKK010000009.1 tpg gene 60097 60627 . + . ID=gene-ACYKJH_000832;Name=ACYKJH_000832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000832 DBLQKK010000009.1 Protein Homology CDS 60097 60627 . + 0 ID=cds-HIH2188961.1;Parent=gene-ACYKJH_000832;Dbxref=NCBI_GP:HIH2188961.1;Name=HIH2188961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343709.1;locus_tag=ACYKJH_000832;product=DUF2393 domain-containing protein;protein_id=HIH2188961.1;transl_table=11 DBLQKK010000009.1 tpg gene 60627 61136 . + . ID=gene-ACYKJH_000833;Name=ACYKJH_000833;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000833 DBLQKK010000009.1 Protein Homology CDS 60627 61136 . + 0 ID=cds-HIH2188962.1;Parent=gene-ACYKJH_000833;Dbxref=NCBI_GP:HIH2188962.1;Name=HIH2188962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343708.1;locus_tag=ACYKJH_000833;product=DUF2393 family protein;protein_id=HIH2188962.1;transl_table=11 ##sequence-region DBLQKK010000010.1 1 60197 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000010.1 tpg region 1 60197 . + . ID=DBLQKK010000010.1:1..60197;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000010.1 tpg gene 1 459 . - . ID=gene-ACYKJH_000834;Name=ACYKJH_000834;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000834;partial=true;start_range=.,1 DBLQKK010000010.1 Protein Homology CDS 1 459 . - 0 ID=cds-HIH2188963.1;Parent=gene-ACYKJH_000834;Dbxref=NCBI_GP:HIH2188963.1;Name=HIH2188963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344569.1;locus_tag=ACYKJH_000834;partial=true;product=hypothetical protein;protein_id=HIH2188963.1;start_range=.,1;transl_table=11 DBLQKK010000010.1 tpg gene 516 1283 . - . ID=gene-ACYKJH_000835;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=ACYKJH_000835 DBLQKK010000010.1 Protein Homology CDS 516 1283 . - 0 ID=cds-HIH2188964.1;Parent=gene-ACYKJH_000835;Dbxref=NCBI_GP:HIH2188964.1;Name=HIH2188964.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002871684.1;locus_tag=ACYKJH_000835;product=flagellar biosynthetic protein FliR;protein_id=HIH2188964.1;transl_table=11 DBLQKK010000010.1 tpg gene 1270 1905 . - . ID=gene-ACYKJH_000836;Name=ACYKJH_000836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000836 DBLQKK010000010.1 Protein Homology CDS 1270 1905 . - 0 ID=cds-HIH2188965.1;Parent=gene-ACYKJH_000836;Dbxref=NCBI_GP:HIH2188965.1;Name=HIH2188965.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344571.1;locus_tag=ACYKJH_000836;product=ABC transporter ATP-binding protein;protein_id=HIH2188965.1;transl_table=11 DBLQKK010000010.1 tpg gene 1918 2991 . - . ID=gene-ACYKJH_000837;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=ACYKJH_000837 DBLQKK010000010.1 Protein Homology CDS 1918 2991 . - 0 ID=cds-HIH2188966.1;Parent=gene-ACYKJH_000837;Dbxref=NCBI_GP:HIH2188966.1;Name=HIH2188966.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344572.1;locus_tag=ACYKJH_000837;product=translation elongation factor Ts;protein_id=HIH2188966.1;transl_table=11 DBLQKK010000010.1 tpg gene 2991 3782 . - . ID=gene-ACYKJH_000838;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=ACYKJH_000838 DBLQKK010000010.1 Protein Homology CDS 2991 3782 . - 0 ID=cds-HIH2188967.1;Parent=gene-ACYKJH_000838;Dbxref=NCBI_GP:HIH2188967.1;Name=HIH2188967.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344573.1;locus_tag=ACYKJH_000838;product=30S ribosomal protein S2;protein_id=HIH2188967.1;transl_table=11 DBLQKK010000010.1 tpg gene 3898 5061 . - . ID=gene-ACYKJH_000839;Name=ACYKJH_000839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000839 DBLQKK010000010.1 Protein Homology CDS 3898 5061 . - 0 ID=cds-HIH2188968.1;Parent=gene-ACYKJH_000839;Dbxref=NCBI_GP:HIH2188968.1;Name=HIH2188968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344574.1;locus_tag=ACYKJH_000839;product=class I SAM-dependent methyltransferase;protein_id=HIH2188968.1;transl_table=11 DBLQKK010000010.1 tpg gene 5189 6313 . - . ID=gene-ACYKJH_000840;Name=ACYKJH_000840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000840 DBLQKK010000010.1 Protein Homology CDS 5189 6313 . - 0 ID=cds-HIH2188969.1;Parent=gene-ACYKJH_000840;Dbxref=NCBI_GP:HIH2188969.1;Name=HIH2188969.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344575.1;locus_tag=ACYKJH_000840;product=c-type cytochrome;protein_id=HIH2188969.1;transl_table=11 DBLQKK010000010.1 tpg gene 6310 7560 . - . ID=gene-ACYKJH_000841;Name=ACYKJH_000841;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000841 DBLQKK010000010.1 Protein Homology CDS 6310 7560 . - 0 ID=cds-HIH2188970.1;Parent=gene-ACYKJH_000841;Dbxref=NCBI_GP:HIH2188970.1;Name=HIH2188970.1;Ontology_term=GO:0022904,GO:0008121,GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=ubiquinol-cytochrome-c reductase activity|0008121||IEA,electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344576.1;locus_tag=ACYKJH_000841;product=cytochrome b;protein_id=HIH2188970.1;transl_table=11 DBLQKK010000010.1 tpg gene 7562 8065 . - . ID=gene-ACYKJH_000842;Name=petA;gbkey=Gene;gene=petA;gene_biotype=protein_coding;locus_tag=ACYKJH_000842 DBLQKK010000010.1 Protein Homology CDS 7562 8065 . - 0 ID=cds-HIH2188971.1;Parent=gene-ACYKJH_000842;Dbxref=NCBI_GP:HIH2188971.1;Name=HIH2188971.1;Ontology_term=GO:0009060,GO:0008121,GO:0009055,GO:0045275;gbkey=CDS;gene=petA;go_component=respiratory chain complex III|0045275||IEA;go_function=ubiquinol-cytochrome-c reductase activity|0008121||IEA,electron transfer activity|0009055||IEA;go_process=aerobic respiration|0009060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344577.1;locus_tag=ACYKJH_000842;product=ubiquinol-cytochrome c reductase iron-sulfur subunit;protein_id=HIH2188971.1;transl_table=11 DBLQKK010000010.1 tpg gene 8156 9442 . - . ID=gene-ACYKJH_000843;Name=ACYKJH_000843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000843 DBLQKK010000010.1 Protein Homology CDS 8156 9442 . - 0 ID=cds-HIH2188972.1;Parent=gene-ACYKJH_000843;Dbxref=NCBI_GP:HIH2188972.1;Name=HIH2188972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344578.1;locus_tag=ACYKJH_000843;product=arsenic transporter;protein_id=HIH2188972.1;transl_table=11 DBLQKK010000010.1 tpg gene 9443 11302 . - . ID=gene-ACYKJH_000844;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=ACYKJH_000844 DBLQKK010000010.1 Protein Homology CDS 9443 11302 . - 0 ID=cds-HIH2188973.1;Parent=gene-ACYKJH_000844;Dbxref=NCBI_GP:HIH2188973.1;Name=HIH2188973.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344579.1;locus_tag=ACYKJH_000844;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=HIH2188973.1;transl_table=11 DBLQKK010000010.1 tpg gene 11390 11887 . - . ID=gene-ACYKJH_000845;Name=cetB;gbkey=Gene;gene=cetB;gene_biotype=protein_coding;locus_tag=ACYKJH_000845 DBLQKK010000010.1 Protein Homology CDS 11390 11887 . - 0 ID=cds-HIH2188974.1;Parent=gene-ACYKJH_000845;Dbxref=NCBI_GP:HIH2188974.1;Name=HIH2188974.1;gbkey=CDS;gene=cetB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344580.1;locus_tag=ACYKJH_000845;product=bipartate energy taxis response protein CetB;protein_id=HIH2188974.1;transl_table=11 DBLQKK010000010.1 tpg gene 11905 13284 . - . ID=gene-ACYKJH_000846;Name=cetA;gbkey=Gene;gene=cetA;gene_biotype=protein_coding;locus_tag=ACYKJH_000846 DBLQKK010000010.1 Protein Homology CDS 11905 13284 . - 0 ID=cds-HIH2188975.1;Parent=gene-ACYKJH_000846;Dbxref=NCBI_GP:HIH2188975.1;Name=HIH2188975.1;gbkey=CDS;gene=cetA;inference=COORDINATES: protein motif:HMM:NF012245.6;locus_tag=ACYKJH_000846;product=bipartate energy taxis response protein CetA;protein_id=HIH2188975.1;transl_table=11 DBLQKK010000010.1 tpg gene 13401 13895 . - . ID=gene-ACYKJH_000847;Name=cetC;gbkey=Gene;gene=cetC;gene_biotype=protein_coding;locus_tag=ACYKJH_000847 DBLQKK010000010.1 Protein Homology CDS 13401 13895 . - 0 ID=cds-HIH2188976.1;Parent=gene-ACYKJH_000847;Dbxref=NCBI_GP:HIH2188976.1;Name=HIH2188976.1;gbkey=CDS;gene=cetC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344582.1;locus_tag=ACYKJH_000847;product=energy taxis response protein CetC;protein_id=HIH2188976.1;transl_table=11 DBLQKK010000010.1 tpg gene 14164 15540 . + . ID=gene-ACYKJH_000848;Name=ACYKJH_000848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000848 DBLQKK010000010.1 Protein Homology CDS 14164 15540 . + 0 ID=cds-HIH2188977.1;Parent=gene-ACYKJH_000848;Dbxref=NCBI_GP:HIH2188977.1;Name=HIH2188977.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344583.1;locus_tag=ACYKJH_000848;product=cation:dicarboxylate symporter family transporter;protein_id=HIH2188977.1;transl_table=11 DBLQKK010000010.1 tpg gene 15537 16343 . - . ID=gene-ACYKJH_000849;Name=ACYKJH_000849;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000849 DBLQKK010000010.1 Protein Homology CDS 15537 16343 . - 0 ID=cds-HIH2188978.1;Parent=gene-ACYKJH_000849;Dbxref=NCBI_GP:HIH2188978.1;Name=HIH2188978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344584.1;locus_tag=ACYKJH_000849;product=inverse autotransporter beta domain-containing protein;protein_id=HIH2188978.1;transl_table=11 DBLQKK010000010.1 tpg gene 16485 18011 . + . ID=gene-ACYKJH_000850;Name=ACYKJH_000850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000850 DBLQKK010000010.1 Protein Homology CDS 16485 18011 . + 0 ID=cds-HIH2188979.1;Parent=gene-ACYKJH_000850;Dbxref=NCBI_GP:HIH2188979.1;Name=HIH2188979.1;Ontology_term=GO:0006817,GO:0005315,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344585.1;locus_tag=ACYKJH_000850;product=inorganic phosphate transporter;protein_id=HIH2188979.1;transl_table=11 DBLQKK010000010.1 tpg gene 18019 19197 . - . ID=gene-ACYKJH_000851;Name=ACYKJH_000851;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000851 DBLQKK010000010.1 Protein Homology CDS 18019 19197 . - 0 ID=cds-HIH2188980.1;Parent=gene-ACYKJH_000851;Dbxref=NCBI_GP:HIH2188980.1;Name=HIH2188980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344586.1;locus_tag=ACYKJH_000851;product=metal-dependent hydrolase;protein_id=HIH2188980.1;transl_table=11 DBLQKK010000010.1 tpg gene 19207 20103 . - . ID=gene-ACYKJH_000852;Name=ACYKJH_000852;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000852 DBLQKK010000010.1 Protein Homology CDS 19207 20103 . - 0 ID=cds-HIH2188981.1;Parent=gene-ACYKJH_000852;Dbxref=NCBI_GP:HIH2188981.1;Name=HIH2188981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344587.1;locus_tag=ACYKJH_000852;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=HIH2188981.1;transl_table=11 DBLQKK010000010.1 tpg gene 20100 21518 . - . ID=gene-ACYKJH_000853;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=ACYKJH_000853 DBLQKK010000010.1 Protein Homology CDS 20100 21518 . - 0 ID=cds-HIH2188982.1;Parent=gene-ACYKJH_000853;Dbxref=NCBI_GP:HIH2188982.1;Name=HIH2188982.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344588.1;locus_tag=ACYKJH_000853;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=HIH2188982.1;transl_table=11 DBLQKK010000010.1 tpg gene 21633 22127 . + . ID=gene-ACYKJH_000854;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=ACYKJH_000854 DBLQKK010000010.1 Protein Homology CDS 21633 22127 . + 0 ID=cds-HIH2188983.1;Parent=gene-ACYKJH_000854;Dbxref=NCBI_GP:HIH2188983.1;Name=HIH2188983.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344589.1;locus_tag=ACYKJH_000854;product=S-ribosylhomocysteine lyase;protein_id=HIH2188983.1;transl_table=11 DBLQKK010000010.1 tpg gene 22438 23430 . + . ID=gene-ACYKJH_000855;Name=ACYKJH_000855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000855 DBLQKK010000010.1 Protein Homology CDS 22438 23430 . + 0 ID=cds-HIH2188984.1;Parent=gene-ACYKJH_000855;Dbxref=NCBI_GP:HIH2188984.1;Name=HIH2188984.1;Ontology_term=GO:0005506,GO:0046872,GO:0051213;gbkey=CDS;go_function=iron ion binding|0005506||IEA,metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344590.1;locus_tag=ACYKJH_000855;product=isopenicillin N synthase family dioxygenase;protein_id=HIH2188984.1;transl_table=11 DBLQKK010000010.1 tpg gene 23441 24211 . + . ID=gene-ACYKJH_000856;Name=ACYKJH_000856;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000856 DBLQKK010000010.1 Protein Homology CDS 23441 24211 . + 0 ID=cds-HIH2188985.1;Parent=gene-ACYKJH_000856;Dbxref=NCBI_GP:HIH2188985.1;Name=HIH2188985.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002855781.1;locus_tag=ACYKJH_000856;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=HIH2188985.1;transl_table=11 DBLQKK010000010.1 tpg gene 24223 26487 . + . ID=gene-ACYKJH_000857;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=ACYKJH_000857 DBLQKK010000010.1 Protein Homology CDS 24223 26487 . + 0 ID=cds-HIH2188986.1;Parent=gene-ACYKJH_000857;Dbxref=NCBI_GP:HIH2188986.1;Name=HIH2188986.1;Ontology_term=GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344592.1;locus_tag=ACYKJH_000857;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=HIH2188986.1;transl_table=11 DBLQKK010000010.1 tpg gene 26497 27345 . + . ID=gene-ACYKJH_000858;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=ACYKJH_000858 DBLQKK010000010.1 Protein Homology CDS 26497 27345 . + 0 ID=cds-HIH2188987.1;Parent=gene-ACYKJH_000858;Dbxref=NCBI_GP:HIH2188987.1;Name=HIH2188987.1;Ontology_term=GO:0009086,GO:0004489,GO:0005829;gbkey=CDS;gene=metF;go_component=cytosol|0005829||IEA;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344593.1;locus_tag=ACYKJH_000858;product=methylenetetrahydrofolate reductase [NAD(P)H];protein_id=HIH2188987.1;transl_table=11 DBLQKK010000010.1 tpg gene 27367 27558 . - . ID=gene-ACYKJH_000859;Name=ACYKJH_000859;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000859 DBLQKK010000010.1 Protein Homology CDS 27367 27558 . - 0 ID=cds-HIH2188988.1;Parent=gene-ACYKJH_000859;Dbxref=NCBI_GP:HIH2188988.1;Name=HIH2188988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344594.1;locus_tag=ACYKJH_000859;product=hypothetical protein;protein_id=HIH2188988.1;transl_table=11 DBLQKK010000010.1 tpg gene 27555 28235 . - . ID=gene-ACYKJH_000860;Name=ACYKJH_000860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000860 DBLQKK010000010.1 Protein Homology CDS 27555 28235 . - 0 ID=cds-HIH2188989.1;Parent=gene-ACYKJH_000860;Dbxref=NCBI_GP:HIH2188989.1;Name=HIH2188989.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344595.1;locus_tag=ACYKJH_000860;product=F0F1 ATP synthase subunit A;protein_id=HIH2188989.1;transl_table=11 DBLQKK010000010.1 tpg gene 28304 29644 . - . ID=gene-ACYKJH_000861;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=ACYKJH_000861 DBLQKK010000010.1 Protein Homology CDS 28304 29644 . - 0 ID=cds-HIH2188990.1;Parent=gene-ACYKJH_000861;Dbxref=NCBI_GP:HIH2188990.1;Name=HIH2188990.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344596.1;locus_tag=ACYKJH_000861;product=DNA repair protein RadA;protein_id=HIH2188990.1;transl_table=11 DBLQKK010000010.1 tpg gene 29644 30510 . - . ID=gene-ACYKJH_000862;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=ACYKJH_000862 DBLQKK010000010.1 Protein Homology CDS 29644 30510 . - 0 ID=cds-HIH2188991.1;Parent=gene-ACYKJH_000862;Dbxref=NCBI_GP:HIH2188991.1;Name=HIH2188991.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344597.1;locus_tag=ACYKJH_000862;product=signal recognition particle-docking protein FtsY;protein_id=HIH2188991.1;transl_table=11 DBLQKK010000010.1 tpg gene 30510 31067 . - . ID=gene-ACYKJH_000863;Name=ACYKJH_000863;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000863 DBLQKK010000010.1 Protein Homology CDS 30510 31067 . - 0 ID=cds-HIH2188992.1;Parent=gene-ACYKJH_000863;Dbxref=NCBI_GP:HIH2188992.1;Name=HIH2188992.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344598.1;locus_tag=ACYKJH_000863;product=TlpA family protein disulfide reductase;protein_id=HIH2188992.1;transl_table=11 DBLQKK010000010.1 tpg gene 31150 31776 . + . ID=gene-ACYKJH_000864;Name=ACYKJH_000864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000864 DBLQKK010000010.1 Protein Homology CDS 31150 31776 . + 0 ID=cds-HIH2188993.1;Parent=gene-ACYKJH_000864;Dbxref=NCBI_GP:HIH2188993.1;Name=HIH2188993.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344599.1;locus_tag=ACYKJH_000864;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=HIH2188993.1;transl_table=11 DBLQKK010000010.1 tpg gene 31697 33250 . + . ID=gene-ACYKJH_000865;Name=rny;gbkey=Gene;gene=rny;gene_biotype=protein_coding;locus_tag=ACYKJH_000865 DBLQKK010000010.1 Protein Homology CDS 31697 33250 . + 0 ID=cds-HIH2188994.1;Parent=gene-ACYKJH_000865;Dbxref=NCBI_GP:HIH2188994.1;Name=HIH2188994.1;Ontology_term=GO:0006402,GO:0003723,GO:0016020;gbkey=CDS;gene=rny;go_component=membrane|0016020||IEA;go_function=RNA binding|0003723||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344600.1;locus_tag=ACYKJH_000865;product=ribonuclease Y;protein_id=HIH2188994.1;transl_table=11 DBLQKK010000010.1 tpg gene 33259 33816 . + . ID=gene-ACYKJH_000866;Name=ACYKJH_000866;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000866 DBLQKK010000010.1 Protein Homology CDS 33259 33816 . + 0 ID=cds-HIH2188995.1;Parent=gene-ACYKJH_000866;Dbxref=NCBI_GP:HIH2188995.1;Name=HIH2188995.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344601.1;locus_tag=ACYKJH_000866;product=DedA family protein;protein_id=HIH2188995.1;transl_table=11 DBLQKK010000010.1 tpg gene 33816 35075 . + . ID=gene-ACYKJH_000867;Name=ACYKJH_000867;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000867 DBLQKK010000010.1 Protein Homology CDS 33816 35075 . + 0 ID=cds-HIH2188996.1;Parent=gene-ACYKJH_000867;Dbxref=NCBI_GP:HIH2188996.1;Name=HIH2188996.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344602.1;locus_tag=ACYKJH_000867;product=ComEC/Rec2 family competence protein;protein_id=HIH2188996.1;transl_table=11 DBLQKK010000010.1 tpg gene 35019 35825 . - . ID=gene-ACYKJH_000868;Name=ACYKJH_000868;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000868 DBLQKK010000010.1 Protein Homology CDS 35019 35825 . - 0 ID=cds-HIH2188997.1;Parent=gene-ACYKJH_000868;Dbxref=NCBI_GP:HIH2188997.1;Name=HIH2188997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344603.1;locus_tag=ACYKJH_000868;product=YihY/virulence factor BrkB family protein;protein_id=HIH2188997.1;transl_table=11 DBLQKK010000010.1 tpg gene 35829 37211 . - . ID=gene-ACYKJH_000869;Name=ACYKJH_000869;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000869 DBLQKK010000010.1 Protein Homology CDS 35829 37211 . - 0 ID=cds-HIH2188998.1;Parent=gene-ACYKJH_000869;Dbxref=NCBI_GP:HIH2188998.1;Name=HIH2188998.1;Ontology_term=GO:0003824,GO:0050660;gbkey=CDS;go_function=catalytic activity|0003824||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344604.1;locus_tag=ACYKJH_000869;product=FAD-linked oxidase C-terminal domain-containing protein;protein_id=HIH2188998.1;transl_table=11 DBLQKK010000010.1 tpg gene 37214 37939 . - . ID=gene-ACYKJH_000870;Name=ACYKJH_000870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000870 DBLQKK010000010.1 Protein Homology CDS 37214 37939 . - 0 ID=cds-HIH2188999.1;Parent=gene-ACYKJH_000870;Dbxref=NCBI_GP:HIH2188999.1;Name=HIH2188999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344605.1;locus_tag=ACYKJH_000870;product=plasminogen-binding N-terminal domain-containing protein;protein_id=HIH2188999.1;transl_table=11 DBLQKK010000010.1 tpg gene 38061 39221 . + . ID=gene-ACYKJH_000871;Name=ACYKJH_000871;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000871 DBLQKK010000010.1 Protein Homology CDS 38061 39221 . + 0 ID=cds-HIH2189000.1;Parent=gene-ACYKJH_000871;Dbxref=NCBI_GP:HIH2189000.1;Name=HIH2189000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344606.1;locus_tag=ACYKJH_000871;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=HIH2189000.1;transl_table=11 DBLQKK010000010.1 tpg gene 39218 39421 . - . ID=gene-ACYKJH_000872;Name=ACYKJH_000872;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000872 DBLQKK010000010.1 Protein Homology CDS 39218 39421 . - 0 ID=cds-HIH2189001.1;Parent=gene-ACYKJH_000872;Dbxref=NCBI_GP:HIH2189001.1;Name=HIH2189001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344607.1;locus_tag=ACYKJH_000872;product=hypothetical protein;protein_id=HIH2189001.1;transl_table=11 DBLQKK010000010.1 tpg gene 39423 40103 . - . ID=gene-ACYKJH_000873;Name=ACYKJH_000873;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000873 DBLQKK010000010.1 Protein Homology CDS 39423 40103 . - 0 ID=cds-HIH2189002.1;Parent=gene-ACYKJH_000873;Dbxref=NCBI_GP:HIH2189002.1;Name=HIH2189002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344608.1;locus_tag=ACYKJH_000873;product=polyphenol oxidase family protein;protein_id=HIH2189002.1;transl_table=11 DBLQKK010000010.1 tpg gene 40067 40678 . - . ID=gene-ACYKJH_000874;Name=ACYKJH_000874;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000874 DBLQKK010000010.1 Protein Homology CDS 40067 40678 . - 0 ID=cds-HIH2189003.1;Parent=gene-ACYKJH_000874;Dbxref=NCBI_GP:HIH2189003.1;Name=HIH2189003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344609.1;locus_tag=ACYKJH_000874;product=riboflavin synthase;protein_id=HIH2189003.1;transl_table=11 DBLQKK010000010.1 tpg gene 40687 43227 . - . ID=gene-ACYKJH_000875;Name=ACYKJH_000875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000875 DBLQKK010000010.1 Protein Homology CDS 40687 43227 . - 0 ID=cds-HIH2189004.1;Parent=gene-ACYKJH_000875;Dbxref=NCBI_GP:HIH2189004.1;Name=HIH2189004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344610.1;locus_tag=ACYKJH_000875;product=hypothetical protein;protein_id=HIH2189004.1;transl_table=11 DBLQKK010000010.1 tpg gene 43389 43649 . + . ID=gene-ACYKJH_000876;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=ACYKJH_000876 DBLQKK010000010.1 Protein Homology CDS 43389 43649 . + 0 ID=cds-HIH2189005.1;Parent=gene-ACYKJH_000876;Dbxref=NCBI_GP:HIH2189005.1;Name=HIH2189005.1;gbkey=CDS;gene=groES;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344611.1;locus_tag=ACYKJH_000876;product=co-chaperone GroES;protein_id=HIH2189005.1;transl_table=11 DBLQKK010000010.1 tpg gene 43670 45307 . + . ID=gene-ACYKJH_000877;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=ACYKJH_000877 DBLQKK010000010.1 Protein Homology CDS 43670 45307 . + 0 ID=cds-HIH2189006.1;Parent=gene-ACYKJH_000877;Dbxref=NCBI_GP:HIH2189006.1;Name=HIH2189006.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344612.1;locus_tag=ACYKJH_000877;product=chaperonin GroEL;protein_id=HIH2189006.1;transl_table=11 DBLQKK010000010.1 tpg gene 45350 46543 . - . ID=gene-ACYKJH_000878;Name=dccS;gbkey=Gene;gene=dccS;gene_biotype=protein_coding;locus_tag=ACYKJH_000878 DBLQKK010000010.1 Protein Homology CDS 45350 46543 . - 0 ID=cds-HIH2189007.1;Parent=gene-ACYKJH_000878;Dbxref=NCBI_GP:HIH2189007.1;Name=HIH2189007.1;gbkey=CDS;gene=dccS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344613.1;locus_tag=ACYKJH_000878;product=two-component system sensor histidine kinase DccS;protein_id=HIH2189007.1;transl_table=11 DBLQKK010000010.1 tpg gene 46536 47201 . - . ID=gene-ACYKJH_000879;Name=dccR;gbkey=Gene;gene=dccR;gene_biotype=protein_coding;locus_tag=ACYKJH_000879 DBLQKK010000010.1 Protein Homology CDS 46536 47201 . - 0 ID=cds-HIH2189008.1;Parent=gene-ACYKJH_000879;Dbxref=NCBI_GP:HIH2189008.1;Name=HIH2189008.1;gbkey=CDS;gene=dccR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344614.1;locus_tag=ACYKJH_000879;product=two-component system response regulator DccR;protein_id=HIH2189008.1;transl_table=11 DBLQKK010000010.1 tpg gene 47349 47948 . + . ID=gene-ACYKJH_000880;Name=ACYKJH_000880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000880 DBLQKK010000010.1 Protein Homology CDS 47349 47948 . + 0 ID=cds-HIH2189009.1;Parent=gene-ACYKJH_000880;Dbxref=NCBI_GP:HIH2189009.1;Name=HIH2189009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344615.1;locus_tag=ACYKJH_000880;product=bacteriohemerythrin;protein_id=HIH2189009.1;transl_table=11 DBLQKK010000010.1 tpg gene 47959 48207 . + . ID=gene-ACYKJH_000881;Name=ACYKJH_000881;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000881 DBLQKK010000010.1 Protein Homology CDS 47959 48207 . + 0 ID=cds-HIH2189010.1;Parent=gene-ACYKJH_000881;Dbxref=NCBI_GP:HIH2189010.1;Name=HIH2189010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344616.1;locus_tag=ACYKJH_000881;product=ribbon-helix-helix domain-containing protein;protein_id=HIH2189010.1;transl_table=11 DBLQKK010000010.1 tpg gene 48299 48373 . - . ID=gene-ACYKJH_000882;Name=ACYKJH_000882;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_000882 DBLQKK010000010.1 tRNAscan-SE tRNA 48299 48373 . - . ID=rna-ACYKJH_000882;Parent=gene-ACYKJH_000882;anticodon=(pos:complement(48339..48341));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000882;product=tRNA-Asn DBLQKK010000010.1 tRNAscan-SE exon 48299 48373 . - . ID=exon-ACYKJH_000882-1;Parent=rna-ACYKJH_000882;anticodon=(pos:complement(48339..48341));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000882;product=tRNA-Asn DBLQKK010000010.1 tpg gene 48466 49713 . - . ID=gene-ACYKJH_000883;Name=ACYKJH_000883;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000883 DBLQKK010000010.1 Protein Homology CDS 48466 49713 . - 0 ID=cds-HIH2189011.1;Parent=gene-ACYKJH_000883;Dbxref=NCBI_GP:HIH2189011.1;Name=HIH2189011.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344617.1;locus_tag=ACYKJH_000883;product=ArsS family sensor histidine kinase;protein_id=HIH2189011.1;transl_table=11 DBLQKK010000010.1 tpg gene 49710 50384 . - . ID=gene-ACYKJH_000884;Name=ACYKJH_000884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000884 DBLQKK010000010.1 Protein Homology CDS 49710 50384 . - 0 ID=cds-HIH2189012.1;Parent=gene-ACYKJH_000884;Dbxref=NCBI_GP:HIH2189012.1;Name=HIH2189012.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344618.1;locus_tag=ACYKJH_000884;product=response regulator transcription factor;protein_id=HIH2189012.1;transl_table=11 DBLQKK010000010.1 tpg gene 50460 51878 . - . ID=gene-ACYKJH_000885;Name=htrA;gbkey=Gene;gene=htrA;gene_biotype=protein_coding;locus_tag=ACYKJH_000885 DBLQKK010000010.1 Protein Homology CDS 50460 51878 . - 0 ID=cds-HIH2189013.1;Parent=gene-ACYKJH_000885;Dbxref=NCBI_GP:HIH2189013.1;Name=HIH2189013.1;gbkey=CDS;gene=htrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344619.1;locus_tag=ACYKJH_000885;product=serine protease HtrA;protein_id=HIH2189013.1;transl_table=11 DBLQKK010000010.1 tpg gene 52078 52971 . + . ID=gene-ACYKJH_000886;Name=ACYKJH_000886;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000886 DBLQKK010000010.1 Protein Homology CDS 52078 52971 . + 0 ID=cds-HIH2189014.1;Parent=gene-ACYKJH_000886;Dbxref=NCBI_GP:HIH2189014.1;Name=HIH2189014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344620.1;locus_tag=ACYKJH_000886;product=DnaJ family protein;protein_id=HIH2189014.1;transl_table=11 DBLQKK010000010.1 tpg gene 52987 53361 . + . ID=gene-ACYKJH_000887;Name=ACYKJH_000887;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000887 DBLQKK010000010.1 Protein Homology CDS 52987 53361 . + 0 ID=cds-HIH2189015.1;Parent=gene-ACYKJH_000887;Dbxref=NCBI_GP:HIH2189015.1;Name=HIH2189015.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344621.1;locus_tag=ACYKJH_000887;product=heat shock protein transcriptional repressor HspR;protein_id=HIH2189015.1;transl_table=11 DBLQKK010000010.1 tpg gene 53368 54993 . + . ID=gene-ACYKJH_000888;Name=ACYKJH_000888;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000888 DBLQKK010000010.1 Protein Homology CDS 53368 54993 . + 0 ID=cds-HIH2189016.1;Parent=gene-ACYKJH_000888;Dbxref=NCBI_GP:HIH2189016.1;Name=HIH2189016.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344622.1;locus_tag=ACYKJH_000888;product=cation:proton antiporter;protein_id=HIH2189016.1;transl_table=11 DBLQKK010000010.1 tpg gene 55003 55335 . + . ID=gene-ACYKJH_000889;Name=ACYKJH_000889;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000889 DBLQKK010000010.1 Protein Homology CDS 55003 55335 . + 0 ID=cds-HIH2189017.1;Parent=gene-ACYKJH_000889;Dbxref=NCBI_GP:HIH2189017.1;Name=HIH2189017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344623.1;locus_tag=ACYKJH_000889;product=hypothetical protein;protein_id=HIH2189017.1;transl_table=11 DBLQKK010000010.1 tpg gene 55332 55952 . + . ID=gene-ACYKJH_000890;Name=ACYKJH_000890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000890 DBLQKK010000010.1 Protein Homology CDS 55332 55952 . + 0 ID=cds-HIH2189018.1;Parent=gene-ACYKJH_000890;Dbxref=NCBI_GP:HIH2189018.1;Name=HIH2189018.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344624.1;locus_tag=ACYKJH_000890;product=HAD family hydrolase;protein_id=HIH2189018.1;transl_table=11 DBLQKK010000010.1 tpg gene 56008 58002 . + . ID=gene-ACYKJH_000891;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=ACYKJH_000891 DBLQKK010000010.1 Protein Homology CDS 56008 58002 . + 0 ID=cds-HIH2189019.1;Parent=gene-ACYKJH_000891;Dbxref=NCBI_GP:HIH2189019.1;Name=HIH2189019.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344625.1;locus_tag=ACYKJH_000891;product=glycine--tRNA ligase subunit beta;protein_id=HIH2189019.1;transl_table=11 DBLQKK010000010.1 tpg gene 57999 58820 . + . ID=gene-ACYKJH_000892;Name=ACYKJH_000892;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000892 DBLQKK010000010.1 Protein Homology CDS 57999 58820 . + 0 ID=cds-HIH2189020.1;Parent=gene-ACYKJH_000892;Dbxref=NCBI_GP:HIH2189020.1;Name=HIH2189020.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344626.1;locus_tag=ACYKJH_000892;product=M23 family metallopeptidase;protein_id=HIH2189020.1;transl_table=11 DBLQKK010000010.1 tpg gene 58817 59767 . + . ID=gene-ACYKJH_000893;Name=ACYKJH_000893;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000893 DBLQKK010000010.1 Protein Homology CDS 58817 59767 . + 0 ID=cds-HIH2189021.1;Parent=gene-ACYKJH_000893;Dbxref=NCBI_GP:HIH2189021.1;Name=HIH2189021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344627.1;locus_tag=ACYKJH_000893;product=SAM-dependent methyltransferase;protein_id=HIH2189021.1;transl_table=11 DBLQKK010000010.1 tpg gene 59764 60197 . - . ID=gene-ACYKJH_000894;Name=ACYKJH_000894;end_range=60197,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000894;partial=true DBLQKK010000010.1 Protein Homology CDS 59764 60197 . - 2 ID=cds-HIH2189022.1;Parent=gene-ACYKJH_000894;Dbxref=NCBI_GP:HIH2189022.1;Name=HIH2189022.1;end_range=60197,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344628.1;locus_tag=ACYKJH_000894;partial=true;product=Ppx/GppA family phosphatase;protein_id=HIH2189022.1;transl_table=11 ##sequence-region DBLQKK010000011.1 1 55567 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000011.1 tpg region 1 55567 . + . ID=DBLQKK010000011.1:1..55567;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000011.1 tpg gene 25 1263 . + . ID=gene-ACYKJH_000895;Name=sorA;gbkey=Gene;gene=sorA;gene_biotype=protein_coding;locus_tag=ACYKJH_000895 DBLQKK010000011.1 Protein Homology CDS 25 1263 . + 0 ID=cds-HIH2189023.1;Parent=gene-ACYKJH_000895;Dbxref=NCBI_GP:HIH2189023.1;Name=HIH2189023.1;gbkey=CDS;gene=sorA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343477.1;locus_tag=ACYKJH_000895;product=sulfite:cytochrome c oxidoreductase molybdopterin oxidoreductase subunit;protein_id=HIH2189023.1;transl_table=11 DBLQKK010000011.1 tpg gene 1266 1607 . + . ID=gene-ACYKJH_000896;Name=sorB;gbkey=Gene;gene=sorB;gene_biotype=protein_coding;locus_tag=ACYKJH_000896 DBLQKK010000011.1 Protein Homology CDS 1266 1607 . + 0 ID=cds-HIH2189024.1;Parent=gene-ACYKJH_000896;Dbxref=NCBI_GP:HIH2189024.1;Name=HIH2189024.1;gbkey=CDS;gene=sorB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343476.1;locus_tag=ACYKJH_000896;product=sulfite:cytochrome c oxidoreductase monoheme cytochrome C subunit;protein_id=HIH2189024.1;transl_table=11 DBLQKK010000011.1 tpg gene 1633 3942 . - . ID=gene-ACYKJH_000897;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=ACYKJH_000897 DBLQKK010000011.1 Protein Homology CDS 1633 3942 . - 0 ID=cds-HIH2189025.1;Parent=gene-ACYKJH_000897;Dbxref=NCBI_GP:HIH2189025.1;Name=HIH2189025.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343475.1;locus_tag=ACYKJH_000897;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=HIH2189025.1;transl_table=11 DBLQKK010000011.1 tpg gene 3971 5038 . - . ID=gene-ACYKJH_000898;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=ACYKJH_000898 DBLQKK010000011.1 Protein Homology CDS 3971 5038 . - 0 ID=cds-HIH2189026.1;Parent=gene-ACYKJH_000898;Dbxref=NCBI_GP:HIH2189026.1;Name=HIH2189026.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343474.1;locus_tag=ACYKJH_000898;product=DNA polymerase III subunit beta;protein_id=HIH2189026.1;transl_table=11 DBLQKK010000011.1 tpg gene 5198 6520 . - . ID=gene-ACYKJH_000899;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=ACYKJH_000899 DBLQKK010000011.1 Protein Homology CDS 5198 6520 . - 0 ID=cds-HIH2189027.1;Parent=gene-ACYKJH_000899;Dbxref=NCBI_GP:HIH2189027.1;Name=HIH2189027.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343473.1;locus_tag=ACYKJH_000899;product=chromosomal replication initiator protein DnaA;protein_id=HIH2189027.1;transl_table=11 DBLQKK010000011.1 tpg gene 6616 7098 . + . ID=gene-ACYKJH_000900;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=ACYKJH_000900 DBLQKK010000011.1 Protein Homology CDS 6616 7098 . + 0 ID=cds-HIH2189028.1;Parent=gene-ACYKJH_000900;Dbxref=NCBI_GP:HIH2189028.1;Name=HIH2189028.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345096.1;locus_tag=ACYKJH_000900;product=crossover junction endodeoxyribonuclease RuvC;protein_id=HIH2189028.1;transl_table=11 DBLQKK010000011.1 tpg gene 7303 9870 . + . ID=gene-ACYKJH_000901;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=ACYKJH_000901 DBLQKK010000011.1 Protein Homology CDS 7303 9870 . + 0 ID=cds-HIH2189029.1;Parent=gene-ACYKJH_000901;Dbxref=NCBI_GP:HIH2189029.1;Name=HIH2189029.1;Ontology_term=GO:0044781,GO:0009288;gbkey=CDS;gene=flgE;go_component=bacterial-type flagellum|0009288||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345095.1;locus_tag=ACYKJH_000901;product=flagellar hook protein FlgE;protein_id=HIH2189029.1;transl_table=11 DBLQKK010000011.1 tpg gene 10296 11567 . + . ID=gene-ACYKJH_000902;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=ACYKJH_000902 DBLQKK010000011.1 Protein Homology CDS 10296 11567 . + 0 ID=cds-HIH2189030.1;Parent=gene-ACYKJH_000902;Dbxref=NCBI_GP:HIH2189030.1;Name=HIH2189030.1;gbkey=CDS;gene=metB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345093.1;locus_tag=ACYKJH_000902;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase;protein_id=HIH2189030.1;transl_table=11 DBLQKK010000011.1 tpg gene 11651 12532 . + . ID=gene-ACYKJH_000903;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=ACYKJH_000903 DBLQKK010000011.1 Protein Homology CDS 11651 12532 . + 0 ID=cds-HIH2189031.1;Parent=gene-ACYKJH_000903;Dbxref=NCBI_GP:HIH2189031.1;Name=HIH2189031.1;gbkey=CDS;gene=metA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345092.1;locus_tag=ACYKJH_000903;product=homoserine O-acetyltransferase/O-succinyltransferase family protein;protein_id=HIH2189031.1;transl_table=11 DBLQKK010000011.1 tpg gene 12537 13136 . - . ID=gene-ACYKJH_000904;Name=ACYKJH_000904;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000904 DBLQKK010000011.1 Protein Homology CDS 12537 13136 . - 0 ID=cds-HIH2189032.1;Parent=gene-ACYKJH_000904;Dbxref=NCBI_GP:HIH2189032.1;Name=HIH2189032.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345091.1;locus_tag=ACYKJH_000904;product=FAD-dependent oxidoreductase;protein_id=HIH2189032.1;transl_table=11 DBLQKK010000011.1 tpg gene 13296 13679 . + . ID=gene-ACYKJH_000905;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=ACYKJH_000905 DBLQKK010000011.1 Protein Homology CDS 13296 13679 . + 0 ID=cds-HIH2189033.1;Parent=gene-ACYKJH_000905;Dbxref=NCBI_GP:HIH2189033.1;Name=HIH2189033.1;Ontology_term=GO:0008616,GO:0033739,GO:0046857,GO:0005737;gbkey=CDS;gene=queF;go_component=cytoplasm|0005737||IEA;go_function=preQ1 synthase activity|0033739||IEA,oxidoreductase activity%2C acting on other nitrogenous compounds as donors%2C with NAD or NADP as acceptor|0046857||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345090.1;locus_tag=ACYKJH_000905;product=preQ(1) synthase;protein_id=HIH2189033.1;transl_table=11 DBLQKK010000011.1 tpg gene 13817 14461 . + . ID=gene-ACYKJH_000906;Name=ACYKJH_000906;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000906 DBLQKK010000011.1 Protein Homology CDS 13817 14461 . + 0 ID=cds-HIH2189034.1;Parent=gene-ACYKJH_000906;Dbxref=NCBI_GP:HIH2189034.1;Name=HIH2189034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002890434.1;locus_tag=ACYKJH_000906;product=outer membrane beta-barrel protein;protein_id=HIH2189034.1;transl_table=11 DBLQKK010000011.1 tpg gene 14497 15126 . - . ID=gene-ACYKJH_000907;Name=ACYKJH_000907;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000907 DBLQKK010000011.1 Protein Homology CDS 14497 15126 . - 0 ID=cds-HIH2189035.1;Parent=gene-ACYKJH_000907;Dbxref=NCBI_GP:HIH2189035.1;Name=HIH2189035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345086.1;locus_tag=ACYKJH_000907;product=hypothetical protein;protein_id=HIH2189035.1;transl_table=11 DBLQKK010000011.1 tpg gene 15446 16981 . + . ID=gene-ACYKJH_000908;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=ACYKJH_000908 DBLQKK010000011.1 Protein Homology CDS 15446 16981 . + 0 ID=cds-HIH2189036.1;Parent=gene-ACYKJH_000908;Dbxref=NCBI_GP:HIH2189036.1;Name=HIH2189036.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345085.1;locus_tag=ACYKJH_000908;product=2-isopropylmalate synthase;protein_id=HIH2189036.1;transl_table=11 DBLQKK010000011.1 tpg gene 16978 18054 . + . ID=gene-ACYKJH_000909;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=ACYKJH_000909 DBLQKK010000011.1 Protein Homology CDS 16978 18054 . + 0 ID=cds-HIH2189037.1;Parent=gene-ACYKJH_000909;Dbxref=NCBI_GP:HIH2189037.1;Name=HIH2189037.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345084.1;locus_tag=ACYKJH_000909;product=3-isopropylmalate dehydrogenase;protein_id=HIH2189037.1;transl_table=11 DBLQKK010000011.1 tpg gene 18041 19453 . + . ID=gene-ACYKJH_000910;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=ACYKJH_000910 DBLQKK010000011.1 Protein Homology CDS 18041 19453 . + 0 ID=cds-HIH2189038.1;Parent=gene-ACYKJH_000910;Dbxref=NCBI_GP:HIH2189038.1;Name=HIH2189038.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345083.1;locus_tag=ACYKJH_000910;product=3-isopropylmalate dehydratase large subunit;protein_id=HIH2189038.1;transl_table=11 DBLQKK010000011.1 tpg gene 19455 20057 . + . ID=gene-ACYKJH_000911;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=ACYKJH_000911 DBLQKK010000011.1 Protein Homology CDS 19455 20057 . + 0 ID=cds-HIH2189039.1;Parent=gene-ACYKJH_000911;Dbxref=NCBI_GP:HIH2189039.1;Name=HIH2189039.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345082.1;locus_tag=ACYKJH_000911;product=3-isopropylmalate dehydratase small subunit;protein_id=HIH2189039.1;transl_table=11 DBLQKK010000011.1 tpg gene 20037 20567 . - . ID=gene-ACYKJH_000912;Name=ACYKJH_000912;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000912 DBLQKK010000011.1 Protein Homology CDS 20037 20567 . - 0 ID=cds-HIH2189040.1;Parent=gene-ACYKJH_000912;Dbxref=NCBI_GP:HIH2189040.1;Name=HIH2189040.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345081.1;locus_tag=ACYKJH_000912;product=GNAT family N-acetyltransferase;protein_id=HIH2189040.1;transl_table=11 DBLQKK010000011.1 tpg gene 20595 20670 . - . ID=gene-ACYKJH_000913;Name=ACYKJH_000913;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_000913 DBLQKK010000011.1 tRNAscan-SE tRNA 20595 20670 . - . ID=rna-ACYKJH_000913;Parent=gene-ACYKJH_000913;anticodon=(pos:complement(20635..20637));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000913;product=tRNA-Val DBLQKK010000011.1 tRNAscan-SE exon 20595 20670 . - . ID=exon-ACYKJH_000913-1;Parent=rna-ACYKJH_000913;anticodon=(pos:complement(20635..20637));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000913;product=tRNA-Val DBLQKK010000011.1 tpg gene 20674 20749 . - . ID=gene-ACYKJH_000914;Name=ACYKJH_000914;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_000914 DBLQKK010000011.1 tRNAscan-SE tRNA 20674 20749 . - . ID=rna-ACYKJH_000914;Parent=gene-ACYKJH_000914;anticodon=(pos:complement(20714..20716));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000914;product=tRNA-Ala DBLQKK010000011.1 tRNAscan-SE exon 20674 20749 . - . ID=exon-ACYKJH_000914-1;Parent=rna-ACYKJH_000914;anticodon=(pos:complement(20714..20716));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000914;product=tRNA-Ala DBLQKK010000011.1 tpg gene 20889 21845 . - . ID=gene-ACYKJH_000915;Name=ACYKJH_000915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000915 DBLQKK010000011.1 Protein Homology CDS 20889 21845 . - 0 ID=cds-HIH2189041.1;Parent=gene-ACYKJH_000915;Dbxref=NCBI_GP:HIH2189041.1;Name=HIH2189041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002932162.1;locus_tag=ACYKJH_000915;product=glycosyl transferase family 90;protein_id=HIH2189041.1;transl_table=11 DBLQKK010000011.1 tpg gene 21959 22046 . - . ID=gene-ACYKJH_000916;Name=ACYKJH_000916;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_000916 DBLQKK010000011.1 tRNAscan-SE tRNA 21959 22046 . - . ID=rna-ACYKJH_000916;Parent=gene-ACYKJH_000916;anticodon=(pos:complement(22010..22012));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000916;product=tRNA-Ser DBLQKK010000011.1 tRNAscan-SE exon 21959 22046 . - . ID=exon-ACYKJH_000916-1;Parent=rna-ACYKJH_000916;anticodon=(pos:complement(22010..22012));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000916;product=tRNA-Ser DBLQKK010000011.1 tpg gene 22182 22258 . + . ID=gene-ACYKJH_000917;Name=ACYKJH_000917;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_000917 DBLQKK010000011.1 tRNAscan-SE tRNA 22182 22258 . + . ID=rna-ACYKJH_000917;Parent=gene-ACYKJH_000917;anticodon=(pos:22216..22218);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000917;product=tRNA-Met DBLQKK010000011.1 tRNAscan-SE exon 22182 22258 . + . ID=exon-ACYKJH_000917-1;Parent=rna-ACYKJH_000917;anticodon=(pos:22216..22218);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000917;product=tRNA-Met DBLQKK010000011.1 tpg gene 22272 22370 . - . ID=gene-ACYKJH_000918;Name=ACYKJH_000918;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000918 DBLQKK010000011.1 Protein Homology CDS 22272 22370 . - 0 ID=cds-HIH2189042.1;Parent=gene-ACYKJH_000918;Dbxref=NCBI_GP:HIH2189042.1;Name=HIH2189042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345080.1;locus_tag=ACYKJH_000918;product=hypothetical protein;protein_id=HIH2189042.1;transl_table=11 DBLQKK010000011.1 tpg gene 22367 23437 . - . ID=gene-ACYKJH_000919;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=ACYKJH_000919 DBLQKK010000011.1 Protein Homology CDS 22367 23437 . - 0 ID=cds-HIH2189043.1;Parent=gene-ACYKJH_000919;Dbxref=NCBI_GP:HIH2189043.1;Name=HIH2189043.1;Ontology_term=GO:0030488,GO:0070475,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=tRNA methylation|0030488||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345079.1;locus_tag=ACYKJH_000919;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=HIH2189043.1;transl_table=11 DBLQKK010000011.1 tpg gene 23461 23997 . - . ID=gene-ACYKJH_000920;Name=ACYKJH_000920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000920 DBLQKK010000011.1 Protein Homology CDS 23461 23997 . - 0 ID=cds-HIH2189044.1;Parent=gene-ACYKJH_000920;Dbxref=NCBI_GP:HIH2189044.1;Name=HIH2189044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345078.1;locus_tag=ACYKJH_000920;product=purine-nucleoside phosphorylase;protein_id=HIH2189044.1;transl_table=11 DBLQKK010000011.1 tpg gene 24078 24878 . + . ID=gene-ACYKJH_000921;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=ACYKJH_000921 DBLQKK010000011.1 Protein Homology CDS 24078 24878 . + 0 ID=cds-HIH2189045.1;Parent=gene-ACYKJH_000921;Dbxref=NCBI_GP:HIH2189045.1;Name=HIH2189045.1;Ontology_term=GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345077.1;locus_tag=ACYKJH_000921;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=HIH2189045.1;transl_table=11 DBLQKK010000011.1 tpg gene 24847 26841 . + . ID=gene-ACYKJH_000922;Name=ACYKJH_000922;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000922 DBLQKK010000011.1 Protein Homology CDS 24847 26841 . + 0 ID=cds-HIH2189046.1;Parent=gene-ACYKJH_000922;Dbxref=NCBI_GP:HIH2189046.1;Name=HIH2189046.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004521,GO:0004534,GO:0008270,GO:0046872;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA,5'-3' RNA exonuclease activity|0004534||IEA,zinc ion binding|0008270||IEA,metal ion binding|0046872||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345076.1;locus_tag=ACYKJH_000922;product=ribonuclease J;protein_id=HIH2189046.1;transl_table=11 DBLQKK010000011.1 tpg gene 26876 27637 . + . ID=gene-ACYKJH_000923;Name=ACYKJH_000923;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000923 DBLQKK010000011.1 Protein Homology CDS 26876 27637 . + 0 ID=cds-HIH2189047.1;Parent=gene-ACYKJH_000923;Dbxref=NCBI_GP:HIH2189047.1;Name=HIH2189047.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345075.1;locus_tag=ACYKJH_000923;product=pseudouridine synthase;protein_id=HIH2189047.1;transl_table=11 DBLQKK010000011.1 tpg gene 27835 28146 . + . ID=gene-ACYKJH_000924;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=ACYKJH_000924 DBLQKK010000011.1 Protein Homology CDS 27835 28146 . + 0 ID=cds-HIH2189048.1;Parent=gene-ACYKJH_000924;Dbxref=NCBI_GP:HIH2189048.1;Name=HIH2189048.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345074.1;locus_tag=ACYKJH_000924;product=30S ribosomal protein S10;protein_id=HIH2189048.1;transl_table=11 DBLQKK010000011.1 tpg gene 28156 28731 . + . ID=gene-ACYKJH_000925;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=ACYKJH_000925 DBLQKK010000011.1 Protein Homology CDS 28156 28731 . + 0 ID=cds-HIH2189049.1;Parent=gene-ACYKJH_000925;Dbxref=NCBI_GP:HIH2189049.1;Name=HIH2189049.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345073.1;locus_tag=ACYKJH_000925;product=50S ribosomal protein L3;protein_id=HIH2189049.1;transl_table=11 DBLQKK010000011.1 tpg gene 28728 29342 . + . ID=gene-ACYKJH_000926;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=ACYKJH_000926 DBLQKK010000011.1 Protein Homology CDS 28728 29342 . + 0 ID=cds-HIH2189050.1;Parent=gene-ACYKJH_000926;Dbxref=NCBI_GP:HIH2189050.1;Name=HIH2189050.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345072.1;locus_tag=ACYKJH_000926;product=50S ribosomal protein L4;protein_id=HIH2189050.1;transl_table=11 DBLQKK010000011.1 tpg gene 29345 29626 . + . ID=gene-ACYKJH_000927;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=ACYKJH_000927 DBLQKK010000011.1 Protein Homology CDS 29345 29626 . + 0 ID=cds-HIH2189051.1;Parent=gene-ACYKJH_000927;Dbxref=NCBI_GP:HIH2189051.1;Name=HIH2189051.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345071.1;locus_tag=ACYKJH_000927;product=50S ribosomal protein L23;protein_id=HIH2189051.1;transl_table=11 DBLQKK010000011.1 tpg gene 29628 30458 . + . ID=gene-ACYKJH_000928;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=ACYKJH_000928 DBLQKK010000011.1 Protein Homology CDS 29628 30458 . + 0 ID=cds-HIH2189052.1;Parent=gene-ACYKJH_000928;Dbxref=NCBI_GP:HIH2189052.1;Name=HIH2189052.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012660814.1;locus_tag=ACYKJH_000928;product=50S ribosomal protein L2;protein_id=HIH2189052.1;transl_table=11 DBLQKK010000011.1 tpg gene 30460 30741 . + . ID=gene-ACYKJH_000929;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=ACYKJH_000929 DBLQKK010000011.1 Protein Homology CDS 30460 30741 . + 0 ID=cds-HIH2189053.1;Parent=gene-ACYKJH_000929;Dbxref=NCBI_GP:HIH2189053.1;Name=HIH2189053.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345069.1;locus_tag=ACYKJH_000929;product=30S ribosomal protein S19;protein_id=HIH2189053.1;transl_table=11 DBLQKK010000011.1 tpg gene 30752 31177 . + . ID=gene-ACYKJH_000930;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=ACYKJH_000930 DBLQKK010000011.1 Protein Homology CDS 30752 31177 . + 0 ID=cds-HIH2189054.1;Parent=gene-ACYKJH_000930;Dbxref=NCBI_GP:HIH2189054.1;Name=HIH2189054.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345068.1;locus_tag=ACYKJH_000930;product=50S ribosomal protein L22;protein_id=HIH2189054.1;transl_table=11 DBLQKK010000011.1 tpg gene 31177 31878 . + . ID=gene-ACYKJH_000931;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=ACYKJH_000931 DBLQKK010000011.1 Protein Homology CDS 31177 31878 . + 0 ID=cds-HIH2189055.1;Parent=gene-ACYKJH_000931;Dbxref=NCBI_GP:HIH2189055.1;Name=HIH2189055.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345067.1;locus_tag=ACYKJH_000931;product=30S ribosomal protein S3;protein_id=HIH2189055.1;transl_table=11 DBLQKK010000011.1 tpg gene 31881 32306 . + . ID=gene-ACYKJH_000932;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=ACYKJH_000932 DBLQKK010000011.1 Protein Homology CDS 31881 32306 . + 0 ID=cds-HIH2189056.1;Parent=gene-ACYKJH_000932;Dbxref=NCBI_GP:HIH2189056.1;Name=HIH2189056.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345066.1;locus_tag=ACYKJH_000932;product=50S ribosomal protein L16;protein_id=HIH2189056.1;transl_table=11 DBLQKK010000011.1 tpg gene 32293 32478 . + . ID=gene-ACYKJH_000933;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=ACYKJH_000933 DBLQKK010000011.1 Protein Homology CDS 32293 32478 . + 0 ID=cds-HIH2189057.1;Parent=gene-ACYKJH_000933;Dbxref=NCBI_GP:HIH2189057.1;Name=HIH2189057.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345065.1;locus_tag=ACYKJH_000933;product=50S ribosomal protein L29;protein_id=HIH2189057.1;transl_table=11 DBLQKK010000011.1 tpg gene 32488 32739 . + . ID=gene-ACYKJH_000934;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=ACYKJH_000934 DBLQKK010000011.1 Protein Homology CDS 32488 32739 . + 0 ID=cds-HIH2189058.1;Parent=gene-ACYKJH_000934;Dbxref=NCBI_GP:HIH2189058.1;Name=HIH2189058.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345064.1;locus_tag=ACYKJH_000934;product=30S ribosomal protein S17;protein_id=HIH2189058.1;transl_table=11 DBLQKK010000011.1 tpg gene 32739 33107 . + . ID=gene-ACYKJH_000935;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=ACYKJH_000935 DBLQKK010000011.1 Protein Homology CDS 32739 33107 . + 0 ID=cds-HIH2189059.1;Parent=gene-ACYKJH_000935;Dbxref=NCBI_GP:HIH2189059.1;Name=HIH2189059.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015106543.1;locus_tag=ACYKJH_000935;product=50S ribosomal protein L14;protein_id=HIH2189059.1;transl_table=11 DBLQKK010000011.1 tpg gene 33107 33340 . + . ID=gene-ACYKJH_000936;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=ACYKJH_000936 DBLQKK010000011.1 Protein Homology CDS 33107 33340 . + 0 ID=cds-HIH2189060.1;Parent=gene-ACYKJH_000936;Dbxref=NCBI_GP:HIH2189060.1;Name=HIH2189060.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345062.1;locus_tag=ACYKJH_000936;product=50S ribosomal protein L24;protein_id=HIH2189060.1;transl_table=11 DBLQKK010000011.1 tpg gene 33344 33889 . + . ID=gene-ACYKJH_000937;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=ACYKJH_000937 DBLQKK010000011.1 Protein Homology CDS 33344 33889 . + 0 ID=cds-HIH2189061.1;Parent=gene-ACYKJH_000937;Dbxref=NCBI_GP:HIH2189061.1;Name=HIH2189061.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345061.1;locus_tag=ACYKJH_000937;product=50S ribosomal protein L5;protein_id=HIH2189061.1;transl_table=11 DBLQKK010000011.1 tpg gene 33891 34076 . + . ID=gene-ACYKJH_000938;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=ACYKJH_000938 DBLQKK010000011.1 Protein Homology CDS 33891 34076 . + 0 ID=cds-HIH2189062.1;Parent=gene-ACYKJH_000938;Dbxref=NCBI_GP:HIH2189062.1;Name=HIH2189062.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001085694.1;locus_tag=ACYKJH_000938;product=type Z 30S ribosomal protein S14;protein_id=HIH2189062.1;transl_table=11 DBLQKK010000011.1 tpg gene 34086 34481 . + . ID=gene-ACYKJH_000939;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=ACYKJH_000939 DBLQKK010000011.1 Protein Homology CDS 34086 34481 . + 0 ID=cds-HIH2189063.1;Parent=gene-ACYKJH_000939;Dbxref=NCBI_GP:HIH2189063.1;Name=HIH2189063.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345059.1;locus_tag=ACYKJH_000939;product=30S ribosomal protein S8;protein_id=HIH2189063.1;transl_table=11 DBLQKK010000011.1 tpg gene 34560 35096 . + . ID=gene-ACYKJH_000940;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=ACYKJH_000940 DBLQKK010000011.1 Protein Homology CDS 34560 35096 . + 0 ID=cds-HIH2189064.1;Parent=gene-ACYKJH_000940;Dbxref=NCBI_GP:HIH2189064.1;Name=HIH2189064.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345058.1;locus_tag=ACYKJH_000940;product=50S ribosomal protein L6;protein_id=HIH2189064.1;transl_table=11 DBLQKK010000011.1 tpg gene 35106 35462 . + . ID=gene-ACYKJH_000941;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=ACYKJH_000941 DBLQKK010000011.1 Protein Homology CDS 35106 35462 . + 0 ID=cds-HIH2189065.1;Parent=gene-ACYKJH_000941;Dbxref=NCBI_GP:HIH2189065.1;Name=HIH2189065.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345057.1;locus_tag=ACYKJH_000941;product=50S ribosomal protein L18;protein_id=HIH2189065.1;transl_table=11 DBLQKK010000011.1 tpg gene 35474 35917 . + . ID=gene-ACYKJH_000942;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=ACYKJH_000942 DBLQKK010000011.1 Protein Homology CDS 35474 35917 . + 0 ID=cds-HIH2189066.1;Parent=gene-ACYKJH_000942;Dbxref=NCBI_GP:HIH2189066.1;Name=HIH2189066.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345056.1;locus_tag=ACYKJH_000942;product=30S ribosomal protein S5;protein_id=HIH2189066.1;transl_table=11 DBLQKK010000011.1 tpg gene 35922 36314 . + . ID=gene-ACYKJH_000943;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=ACYKJH_000943 DBLQKK010000011.1 Protein Homology CDS 35922 36314 . + 0 ID=cds-HIH2189067.1;Parent=gene-ACYKJH_000943;Dbxref=NCBI_GP:HIH2189067.1;Name=HIH2189067.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345055.1;locus_tag=ACYKJH_000943;product=50S ribosomal protein L15;protein_id=HIH2189067.1;transl_table=11 DBLQKK010000011.1 tpg gene 36314 37579 . + . ID=gene-ACYKJH_000944;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=ACYKJH_000944 DBLQKK010000011.1 Protein Homology CDS 36314 37579 . + 0 ID=cds-HIH2189068.1;Parent=gene-ACYKJH_000944;Dbxref=NCBI_GP:HIH2189068.1;Name=HIH2189068.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345054.1;locus_tag=ACYKJH_000944;product=preprotein translocase subunit SecY;protein_id=HIH2189068.1;transl_table=11 DBLQKK010000011.1 tpg gene 37607 38878 . - . ID=gene-ACYKJH_000945;Name=ACYKJH_000945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000945 DBLQKK010000011.1 Protein Homology CDS 37607 38878 . - 0 ID=cds-HIH2189069.1;Parent=gene-ACYKJH_000945;Dbxref=NCBI_GP:HIH2189069.1;Name=HIH2189069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345053.1;locus_tag=ACYKJH_000945;product=MFS transporter;protein_id=HIH2189069.1;transl_table=11 DBLQKK010000011.1 tpg gene 39073 41175 . + . ID=gene-ACYKJH_000946;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=ACYKJH_000946 DBLQKK010000011.1 Protein Homology CDS 39073 41175 . + 0 ID=cds-HIH2189070.1;Parent=gene-ACYKJH_000946;Dbxref=NCBI_GP:HIH2189070.1;Name=HIH2189070.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345052.1;locus_tag=ACYKJH_000946;product=type I DNA topoisomerase;protein_id=HIH2189070.1;transl_table=11 DBLQKK010000011.1 tpg gene 41177 42013 . + . ID=gene-ACYKJH_000947;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=ACYKJH_000947 DBLQKK010000011.1 Protein Homology CDS 41177 42013 . + 0 ID=cds-HIH2189071.1;Parent=gene-ACYKJH_000947;Dbxref=NCBI_GP:HIH2189071.1;Name=HIH2189071.1;gbkey=CDS;gene=bioB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345051.1;locus_tag=ACYKJH_000947;product=biotin synthase;protein_id=HIH2189071.1;transl_table=11 DBLQKK010000011.1 tpg gene 41994 43169 . + . ID=gene-ACYKJH_000948;Name=ACYKJH_000948;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000948 DBLQKK010000011.1 Protein Homology CDS 41994 43169 . + 0 ID=cds-HIH2189072.1;Parent=gene-ACYKJH_000948;Dbxref=NCBI_GP:HIH2189072.1;Name=HIH2189072.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345050.1;locus_tag=ACYKJH_000948;product=cation:proton antiporter;protein_id=HIH2189072.1;transl_table=11 DBLQKK010000011.1 tpg gene 43284 44552 . + . ID=gene-ACYKJH_000949;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=ACYKJH_000949 DBLQKK010000011.1 Protein Homology CDS 43284 44552 . + 0 ID=cds-HIH2189073.1;Parent=gene-ACYKJH_000949;Dbxref=NCBI_GP:HIH2189073.1;Name=HIH2189073.1;Ontology_term=GO:0046912;gbkey=CDS;gene=gltA;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345049.1;locus_tag=ACYKJH_000949;product=citrate synthase;protein_id=HIH2189073.1;transl_table=11 DBLQKK010000011.1 tpg gene 44632 45396 . + . ID=gene-ACYKJH_000950;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=ACYKJH_000950 DBLQKK010000011.1 Protein Homology CDS 44632 45396 . + 0 ID=cds-HIH2189074.1;Parent=gene-ACYKJH_000950;Dbxref=NCBI_GP:HIH2189074.1;Name=HIH2189074.1;Ontology_term=GO:0006790,GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345048.1;locus_tag=ACYKJH_000950;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=HIH2189074.1;transl_table=11 DBLQKK010000011.1 tpg gene 45436 46200 . + . ID=gene-ACYKJH_000951;Name=ACYKJH_000951;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000951 DBLQKK010000011.1 Protein Homology CDS 45436 46200 . + 0 ID=cds-HIH2189075.1;Parent=gene-ACYKJH_000951;Dbxref=NCBI_GP:HIH2189075.1;Name=HIH2189075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002860119.1;locus_tag=ACYKJH_000951;product=hypothetical protein;protein_id=HIH2189075.1;transl_table=11 DBLQKK010000011.1 tpg gene 46208 46984 . - . ID=gene-ACYKJH_000952;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=ACYKJH_000952 DBLQKK010000011.1 Protein Homology CDS 46208 46984 . - 0 ID=cds-HIH2189076.1;Parent=gene-ACYKJH_000952;Dbxref=NCBI_GP:HIH2189076.1;Name=HIH2189076.1;Ontology_term=GO:0008762,GO:0050660;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345044.1;locus_tag=ACYKJH_000952;product=UDP-N-acetylmuramate dehydrogenase;protein_id=HIH2189076.1;transl_table=11 DBLQKK010000011.1 tpg gene 46981 47250 . - . ID=gene-ACYKJH_000953;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=ACYKJH_000953 DBLQKK010000011.1 Protein Homology CDS 46981 47250 . - 0 ID=cds-HIH2189077.1;Parent=gene-ACYKJH_000953;Dbxref=NCBI_GP:HIH2189077.1;Name=HIH2189077.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345043.1;locus_tag=ACYKJH_000953;product=flagellar biosynthesis protein FliQ;protein_id=HIH2189077.1;transl_table=11 DBLQKK010000011.1 tpg gene 47262 48122 . - . ID=gene-ACYKJH_000954;Name=ACYKJH_000954;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000954 DBLQKK010000011.1 Protein Homology CDS 47262 48122 . - 0 ID=cds-HIH2189078.1;Parent=gene-ACYKJH_000954;Dbxref=NCBI_GP:HIH2189078.1;Name=HIH2189078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345042.1;locus_tag=ACYKJH_000954;product=menaquinone biosynthesis family protein;protein_id=HIH2189078.1;transl_table=11 DBLQKK010000011.1 tpg gene 48228 49259 . + . ID=gene-ACYKJH_000955;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=ACYKJH_000955 DBLQKK010000011.1 Protein Homology CDS 48228 49259 . + 0 ID=cds-HIH2189079.1;Parent=gene-ACYKJH_000955;Dbxref=NCBI_GP:HIH2189079.1;Name=HIH2189079.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345041.1;locus_tag=ACYKJH_000955;product=recombinase RecA;protein_id=HIH2189079.1;transl_table=11 DBLQKK010000011.1 tpg gene 49259 50503 . + . ID=gene-ACYKJH_000956;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=ACYKJH_000956 DBLQKK010000011.1 Protein Homology CDS 49259 50503 . + 0 ID=cds-HIH2189080.1;Parent=gene-ACYKJH_000956;Dbxref=NCBI_GP:HIH2189080.1;Name=HIH2189080.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345040.1;locus_tag=ACYKJH_000956;product=phosphopyruvate hydratase;protein_id=HIH2189080.1;transl_table=11 DBLQKK010000011.1 tpg gene 50569 50772 . + . ID=gene-ACYKJH_000957;Name=ACYKJH_000957;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000957 DBLQKK010000011.1 Protein Homology CDS 50569 50772 . + 0 ID=cds-HIH2189081.1;Parent=gene-ACYKJH_000957;Dbxref=NCBI_GP:HIH2189081.1;Name=HIH2189081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345039.1;locus_tag=ACYKJH_000957;product=hypothetical protein;protein_id=HIH2189081.1;transl_table=11 DBLQKK010000011.1 tpg gene 50762 51424 . + . ID=gene-ACYKJH_000958;Name=cgpA;gbkey=Gene;gene=cgpA;gene_biotype=protein_coding;locus_tag=ACYKJH_000958 DBLQKK010000011.1 Protein Homology CDS 50762 51424 . + 0 ID=cds-HIH2189082.1;Parent=gene-ACYKJH_000958;Dbxref=NCBI_GP:HIH2189082.1;Name=HIH2189082.1;gbkey=CDS;gene=cgpA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345038.1;locus_tag=ACYKJH_000958;product=glycoprotein CgpA;protein_id=HIH2189082.1;transl_table=11 DBLQKK010000011.1 tpg gene 51424 52272 . + . ID=gene-ACYKJH_000959;Name=ACYKJH_000959;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000959 DBLQKK010000011.1 Protein Homology CDS 51424 52272 . + 0 ID=cds-HIH2189083.1;Parent=gene-ACYKJH_000959;Dbxref=NCBI_GP:HIH2189083.1;Name=HIH2189083.1;Ontology_term=GO:0006281,GO:0006310,GO:0003910,GO:0005524;gbkey=CDS;go_function=DNA ligase (ATP) activity|0003910||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345037.1;locus_tag=ACYKJH_000959;product=DNA ligase;protein_id=HIH2189083.1;transl_table=11 DBLQKK010000011.1 tpg gene 52315 52392 . + . ID=gene-ACYKJH_000960;Name=ACYKJH_000960;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_000960 DBLQKK010000011.1 tRNAscan-SE tRNA 52315 52392 . + . ID=rna-ACYKJH_000960;Parent=gene-ACYKJH_000960;anticodon=(pos:52350..52352);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000960;product=tRNA-Pro DBLQKK010000011.1 tRNAscan-SE exon 52315 52392 . + . ID=exon-ACYKJH_000960-1;Parent=rna-ACYKJH_000960;anticodon=(pos:52350..52352);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000960;product=tRNA-Pro DBLQKK010000011.1 tpg gene 52417 52493 . + . ID=gene-ACYKJH_000961;Name=ACYKJH_000961;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_000961 DBLQKK010000011.1 tRNAscan-SE tRNA 52417 52493 . + . ID=rna-ACYKJH_000961;Parent=gene-ACYKJH_000961;anticodon=(pos:52451..52453);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000961;product=tRNA-His DBLQKK010000011.1 tRNAscan-SE exon 52417 52493 . + . ID=exon-ACYKJH_000961-1;Parent=rna-ACYKJH_000961;anticodon=(pos:52451..52453);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000961;product=tRNA-His DBLQKK010000011.1 tpg gene 52497 52573 . + . ID=gene-ACYKJH_000962;Name=ACYKJH_000962;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_000962 DBLQKK010000011.1 tRNAscan-SE tRNA 52497 52573 . + . ID=rna-ACYKJH_000962;Parent=gene-ACYKJH_000962;anticodon=(pos:52531..52533);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000962;product=tRNA-Arg DBLQKK010000011.1 tRNAscan-SE exon 52497 52573 . + . ID=exon-ACYKJH_000962-1;Parent=rna-ACYKJH_000962;anticodon=(pos:52531..52533);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000962;product=tRNA-Arg DBLQKK010000011.1 tpg gene 52588 52664 . + . ID=gene-ACYKJH_000963;Name=ACYKJH_000963;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_000963 DBLQKK010000011.1 tRNAscan-SE tRNA 52588 52664 . + . ID=rna-ACYKJH_000963;Parent=gene-ACYKJH_000963;anticodon=(pos:52622..52624);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000963;product=tRNA-Arg DBLQKK010000011.1 tRNAscan-SE exon 52588 52664 . + . ID=exon-ACYKJH_000963-1;Parent=rna-ACYKJH_000963;anticodon=(pos:52622..52624);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000963;product=tRNA-Arg DBLQKK010000011.1 tpg gene 52669 52753 . + . ID=gene-ACYKJH_000964;Name=ACYKJH_000964;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_000964 DBLQKK010000011.1 tRNAscan-SE tRNA 52669 52753 . + . ID=rna-ACYKJH_000964;Parent=gene-ACYKJH_000964;anticodon=(pos:52703..52705);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000964;product=tRNA-Leu DBLQKK010000011.1 tRNAscan-SE exon 52669 52753 . + . ID=exon-ACYKJH_000964-1;Parent=rna-ACYKJH_000964;anticodon=(pos:52703..52705);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_000964;product=tRNA-Leu DBLQKK010000011.1 tpg gene 52952 53188 . + . ID=gene-ACYKJH_000965;Name=ACYKJH_000965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000965 DBLQKK010000011.1 Protein Homology CDS 52952 53188 . + 0 ID=cds-HIH2189084.1;Parent=gene-ACYKJH_000965;Dbxref=NCBI_GP:HIH2189084.1;Name=HIH2189084.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.6;locus_tag=ACYKJH_000965;product=tyrosine-type recombinase/integrase;protein_id=HIH2189084.1;transl_table=11 DBLQKK010000011.1 tpg gene 53191 53745 . + . ID=gene-ACYKJH_000966;Name=ACYKJH_000966;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000966 DBLQKK010000011.1 GeneMarkS-2+ CDS 53191 53745 . + 0 ID=cds-HIH2189085.1;Parent=gene-ACYKJH_000966;Dbxref=NCBI_GP:HIH2189085.1;Name=HIH2189085.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_000966;product=hypothetical protein;protein_id=HIH2189085.1;transl_table=11 DBLQKK010000011.1 tpg gene 53956 54183 . + . ID=gene-ACYKJH_000967;Name=ACYKJH_000967;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000967 DBLQKK010000011.1 Protein Homology CDS 53956 54183 . + 0 ID=cds-HIH2189086.1;Parent=gene-ACYKJH_000967;Dbxref=NCBI_GP:HIH2189086.1;Name=HIH2189086.1;Ontology_term=GO:0003729;gbkey=CDS;go_function=mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002869696.1;locus_tag=ACYKJH_000967;product=type II toxin-antitoxin system HicA family toxin;protein_id=HIH2189086.1;transl_table=11 DBLQKK010000011.1 tpg gene 54180 54548 . + . ID=gene-ACYKJH_000968;Name=ACYKJH_000968;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000968 DBLQKK010000011.1 Protein Homology CDS 54180 54548 . + 0 ID=cds-HIH2189087.1;Parent=gene-ACYKJH_000968;Dbxref=NCBI_GP:HIH2189087.1;Name=HIH2189087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894268.1;locus_tag=ACYKJH_000968;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=HIH2189087.1;transl_table=11 DBLQKK010000011.1 tpg gene 54559 54696 . + . ID=gene-ACYKJH_000969;Name=ACYKJH_000969;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000969 DBLQKK010000011.1 Protein Homology CDS 54559 54696 . + 0 ID=cds-HIH2189088.1;Parent=gene-ACYKJH_000969;Dbxref=NCBI_GP:HIH2189088.1;Name=HIH2189088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002869697.1;locus_tag=ACYKJH_000969;product=hypothetical protein;protein_id=HIH2189088.1;transl_table=11 DBLQKK010000011.1 tpg gene 54734 55567 . + . ID=gene-ACYKJH_000970;Name=ACYKJH_000970;end_range=55567,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000970;partial=true DBLQKK010000011.1 GeneMarkS-2+ CDS 54734 55567 . + 0 ID=cds-HIH2189089.1;Parent=gene-ACYKJH_000970;Dbxref=NCBI_GP:HIH2189089.1;Name=HIH2189089.1;end_range=55567,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_000970;partial=true;product=hypothetical protein;protein_id=HIH2189089.1;transl_table=11 ##sequence-region DBLQKK010000012.1 1 52908 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000012.1 tpg region 1 52908 . + . ID=DBLQKK010000012.1:1..52908;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000012.1 tpg gene 31 882 . + . ID=gene-ACYKJH_000971;Name=ACYKJH_000971;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000971 DBLQKK010000012.1 Protein Homology CDS 31 882 . + 0 ID=cds-HIH2189090.1;Parent=gene-ACYKJH_000971;Dbxref=NCBI_GP:HIH2189090.1;Name=HIH2189090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343635.1;locus_tag=ACYKJH_000971;product=ChaN family lipoprotein;protein_id=HIH2189090.1;transl_table=11 DBLQKK010000012.1 tpg gene 879 3146 . + . ID=gene-ACYKJH_000972;Name=ACYKJH_000972;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000972 DBLQKK010000012.1 Protein Homology CDS 879 3146 . + 0 ID=cds-HIH2189091.1;Parent=gene-ACYKJH_000972;Dbxref=NCBI_GP:HIH2189091.1;Name=HIH2189091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343636.1;locus_tag=ACYKJH_000972;product=TonB-dependent receptor domain-containing protein;protein_id=HIH2189091.1;transl_table=11 DBLQKK010000012.1 tpg gene 3158 3919 . + . ID=gene-ACYKJH_000973;Name=ACYKJH_000973;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000973 DBLQKK010000012.1 Protein Homology CDS 3158 3919 . + 0 ID=cds-HIH2189092.1;Parent=gene-ACYKJH_000973;Dbxref=NCBI_GP:HIH2189092.1;Name=HIH2189092.1;Ontology_term=GO:0015031,GO:0015252,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=proton channel activity|0015252||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343637.1;locus_tag=ACYKJH_000973;product=MotA/TolQ/ExbB proton channel family protein;protein_id=HIH2189092.1;transl_table=11 DBLQKK010000012.1 tpg gene 3906 4316 . + . ID=gene-ACYKJH_000974;Name=ACYKJH_000974;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000974 DBLQKK010000012.1 Protein Homology CDS 3906 4316 . + 0 ID=cds-HIH2189093.1;Parent=gene-ACYKJH_000974;Dbxref=NCBI_GP:HIH2189093.1;Name=HIH2189093.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343638.1;locus_tag=ACYKJH_000974;product=biopolymer transporter ExbD;protein_id=HIH2189093.1;transl_table=11 DBLQKK010000012.1 tpg gene 4318 5064 . + . ID=gene-ACYKJH_000975;Name=ACYKJH_000975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000975 DBLQKK010000012.1 Protein Homology CDS 4318 5064 . + 0 ID=cds-HIH2189094.1;Parent=gene-ACYKJH_000975;Dbxref=NCBI_GP:HIH2189094.1;Name=HIH2189094.1;Ontology_term=GO:0031992,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=energy transducer activity|0031992||IEA;inference=COORDINATES: protein motif:HMM:TIGR01352.1;locus_tag=ACYKJH_000975;product=energy transducer TonB family protein;protein_id=HIH2189094.1;transl_table=11 DBLQKK010000012.1 tpg gene 5110 6330 . + . ID=gene-ACYKJH_000976;Name=ACYKJH_000976;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000976 DBLQKK010000012.1 Protein Homology CDS 5110 6330 . + 0 ID=cds-HIH2189095.1;Parent=gene-ACYKJH_000976;Dbxref=NCBI_GP:HIH2189095.1;Name=HIH2189095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002783584.1;locus_tag=ACYKJH_000976;product=putative transporter;protein_id=HIH2189095.1;transl_table=11 DBLQKK010000012.1 tpg gene 6321 7448 . - . ID=gene-ACYKJH_000977;Name=ACYKJH_000977;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000977 DBLQKK010000012.1 Protein Homology CDS 6321 7448 . - 0 ID=cds-HIH2189096.1;Parent=gene-ACYKJH_000977;Dbxref=NCBI_GP:HIH2189096.1;Name=HIH2189096.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002793771.1;locus_tag=ACYKJH_000977;product=MFS transporter;protein_id=HIH2189096.1;transl_table=11 DBLQKK010000012.1 tpg gene 7566 8927 . + . ID=gene-ACYKJH_000978;Name=ACYKJH_000978;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000978 DBLQKK010000012.1 Protein Homology CDS 7566 8927 . + 0 ID=cds-HIH2189097.1;Parent=gene-ACYKJH_000978;Dbxref=NCBI_GP:HIH2189097.1;Name=HIH2189097.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343641.1;locus_tag=ACYKJH_000978;product=hemolysin family protein;protein_id=HIH2189097.1;transl_table=11 DBLQKK010000012.1 tpg gene 8941 10125 . - . ID=gene-ACYKJH_000979;Name=ACYKJH_000979;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000979 DBLQKK010000012.1 Protein Homology CDS 8941 10125 . - 0 ID=cds-HIH2189098.1;Parent=gene-ACYKJH_000979;Dbxref=NCBI_GP:HIH2189098.1;Name=HIH2189098.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002851935.1;locus_tag=ACYKJH_000979;product=metallophosphoesterase;protein_id=HIH2189098.1;transl_table=11 DBLQKK010000012.1 tpg gene 10135 10344 . - . ID=gene-ACYKJH_000980;Name=ACYKJH_000980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000980 DBLQKK010000012.1 Protein Homology CDS 10135 10344 . - 0 ID=cds-HIH2189099.1;Parent=gene-ACYKJH_000980;Dbxref=NCBI_GP:HIH2189099.1;Name=HIH2189099.1;Ontology_term=GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011989570.1;locus_tag=ACYKJH_000980;product=alkylphosphonate utilization protein;protein_id=HIH2189099.1;transl_table=11 DBLQKK010000012.1 tpg gene 10337 11056 . - . ID=gene-ACYKJH_000981;Name=ACYKJH_000981;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000981 DBLQKK010000012.1 Protein Homology CDS 10337 11056 . - 0 ID=cds-HIH2189100.1;Parent=gene-ACYKJH_000981;Dbxref=NCBI_GP:HIH2189100.1;Name=HIH2189100.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343644.1;locus_tag=ACYKJH_000981;product=TerC family protein;protein_id=HIH2189100.1;transl_table=11 DBLQKK010000012.1 tpg gene 11128 11694 . - . ID=gene-ACYKJH_000982;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=ACYKJH_000982 DBLQKK010000012.1 Protein Homology CDS 11128 11694 . - 0 ID=cds-HIH2189101.1;Parent=gene-ACYKJH_000982;Dbxref=NCBI_GP:HIH2189101.1;Name=HIH2189101.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343645.1;locus_tag=ACYKJH_000982;product=phosphoribosylglycinamide formyltransferase;protein_id=HIH2189101.1;transl_table=11 DBLQKK010000012.1 tpg gene 11685 13055 . - . ID=gene-ACYKJH_000983;Name=ACYKJH_000983;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000983 DBLQKK010000012.1 Protein Homology CDS 11685 13055 . - 0 ID=cds-HIH2189102.1;Parent=gene-ACYKJH_000983;Dbxref=NCBI_GP:HIH2189102.1;Name=HIH2189102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343646.1;locus_tag=ACYKJH_000983;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=HIH2189102.1;transl_table=11 DBLQKK010000012.1 tpg gene 13039 13737 . - . ID=gene-ACYKJH_000984;Name=ACYKJH_000984;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000984 DBLQKK010000012.1 Protein Homology CDS 13039 13737 . - 0 ID=cds-HIH2189103.1;Parent=gene-ACYKJH_000984;Dbxref=NCBI_GP:HIH2189103.1;Name=HIH2189103.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343647.1;locus_tag=ACYKJH_000984;product=NYN domain-containing protein;protein_id=HIH2189103.1;transl_table=11 DBLQKK010000012.1 tpg gene 13739 15244 . - . ID=gene-ACYKJH_000985;Name=ACYKJH_000985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000985 DBLQKK010000012.1 Protein Homology CDS 13739 15244 . - 0 ID=cds-HIH2189104.1;Parent=gene-ACYKJH_000985;Dbxref=NCBI_GP:HIH2189104.1;Name=HIH2189104.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343648.1;locus_tag=ACYKJH_000985;product=YifB family Mg chelatase-like AAA ATPase;protein_id=HIH2189104.1;transl_table=11 DBLQKK010000012.1 tpg gene 15241 15768 . - . ID=gene-ACYKJH_000986;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=ACYKJH_000986 DBLQKK010000012.1 Protein Homology CDS 15241 15768 . - 0 ID=cds-HIH2189105.1;Parent=gene-ACYKJH_000986;Dbxref=NCBI_GP:HIH2189105.1;Name=HIH2189105.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343649.1;locus_tag=ACYKJH_000986;product=peptide deformylase;protein_id=HIH2189105.1;transl_table=11 DBLQKK010000012.1 tpg gene 15804 16388 . - . ID=gene-ACYKJH_000987;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=ACYKJH_000987 DBLQKK010000012.1 Protein Homology CDS 15804 16388 . - 0 ID=cds-HIH2189106.1;Parent=gene-ACYKJH_000987;Dbxref=NCBI_GP:HIH2189106.1;Name=HIH2189106.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343650.1;locus_tag=ACYKJH_000987;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=HIH2189106.1;transl_table=11 DBLQKK010000012.1 tpg gene 16388 17722 . - . ID=gene-ACYKJH_000988;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=ACYKJH_000988 DBLQKK010000012.1 Protein Homology CDS 16388 17722 . - 0 ID=cds-HIH2189107.1;Parent=gene-ACYKJH_000988;Dbxref=NCBI_GP:HIH2189107.1;Name=HIH2189107.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343651.1;locus_tag=ACYKJH_000988;product=trigger factor;protein_id=HIH2189107.1;transl_table=11 DBLQKK010000012.1 tpg gene 17866 18438 . + . ID=gene-ACYKJH_000989;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=ACYKJH_000989 DBLQKK010000012.1 Protein Homology CDS 17866 18438 . + 0 ID=cds-HIH2189108.1;Parent=gene-ACYKJH_000989;Dbxref=NCBI_GP:HIH2189108.1;Name=HIH2189108.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343652.1;locus_tag=ACYKJH_000989;product=GTP cyclohydrolase I FolE;protein_id=HIH2189108.1;transl_table=11 DBLQKK010000012.1 tpg gene 18438 19823 . + . ID=gene-ACYKJH_000990;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=ACYKJH_000990 DBLQKK010000012.1 Protein Homology CDS 18438 19823 . + 0 ID=cds-HIH2189109.1;Parent=gene-ACYKJH_000990;Dbxref=NCBI_GP:HIH2189109.1;Name=HIH2189109.1;Ontology_term=GO:0030254,GO:0005524,GO:0016887,GO:0030257;gbkey=CDS;gene=fliI;go_component=type III protein secretion system complex|0030257||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343653.1;locus_tag=ACYKJH_000990;product=flagellar protein export ATPase FliI;protein_id=HIH2189109.1;transl_table=11 DBLQKK010000012.1 tpg gene 19826 21163 . - . ID=gene-ACYKJH_000991;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=ACYKJH_000991 DBLQKK010000012.1 Protein Homology CDS 19826 21163 . - 0 ID=cds-HIH2189110.1;Parent=gene-ACYKJH_000991;Dbxref=NCBI_GP:HIH2189110.1;Name=HIH2189110.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343654.1;locus_tag=ACYKJH_000991;product=amidophosphoribosyltransferase;protein_id=HIH2189110.1;transl_table=11 DBLQKK010000012.1 tpg gene 21165 21893 . - . ID=gene-ACYKJH_000992;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=ACYKJH_000992 DBLQKK010000012.1 Protein Homology CDS 21165 21893 . - 0 ID=cds-HIH2189111.1;Parent=gene-ACYKJH_000992;Dbxref=NCBI_GP:HIH2189111.1;Name=HIH2189111.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343655.1;locus_tag=ACYKJH_000992;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=HIH2189111.1;transl_table=11 DBLQKK010000012.1 tpg gene 21956 23137 . - . ID=gene-ACYKJH_000993;Name=ACYKJH_000993;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000993 DBLQKK010000012.1 Protein Homology CDS 21956 23137 . - 0 ID=cds-HIH2189112.1;Parent=gene-ACYKJH_000993;Dbxref=NCBI_GP:HIH2189112.1;Name=HIH2189112.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343656.1;locus_tag=ACYKJH_000993;product=replication-associated recombination protein A;protein_id=HIH2189112.1;transl_table=11 DBLQKK010000012.1 tpg gene 23137 24264 . - . ID=gene-ACYKJH_000994;Name=ACYKJH_000994;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000994 DBLQKK010000012.1 GeneMarkS-2+ CDS 23137 24264 . - 0 ID=cds-HIH2189113.1;Parent=gene-ACYKJH_000994;Dbxref=NCBI_GP:HIH2189113.1;Name=HIH2189113.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_000994;product=hypothetical protein;protein_id=HIH2189113.1;transl_table=11 DBLQKK010000012.1 tpg gene 24399 24746 . - . ID=gene-ACYKJH_000995;Name=ACYKJH_000995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000995 DBLQKK010000012.1 Protein Homology CDS 24399 24746 . - 0 ID=cds-HIH2189114.1;Parent=gene-ACYKJH_000995;Dbxref=NCBI_GP:HIH2189114.1;Name=HIH2189114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343658.1;locus_tag=ACYKJH_000995;product=hypothetical protein;protein_id=HIH2189114.1;transl_table=11 DBLQKK010000012.1 tpg pseudogene 24845 25418 . - . ID=gene-ACYKJH_000996;Name=ACYKJH_000996;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_000996;pseudo=true DBLQKK010000012.1 Protein Homology CDS 24845 25418 . - 0 ID=cds-ACYKJH_000996;Parent=gene-ACYKJH_000996;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002825721.1;locus_tag=ACYKJH_000996;product=YiiX/YebB-like N1pC/P60 family cysteine hydrolase;pseudo=true;transl_table=11 DBLQKK010000012.1 tpg gene 25420 25743 . - . ID=gene-ACYKJH_000997;Name=ACYKJH_000997;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000997 DBLQKK010000012.1 Protein Homology CDS 25420 25743 . - 0 ID=cds-HIH2189115.1;Parent=gene-ACYKJH_000997;Dbxref=NCBI_GP:HIH2189115.1;Name=HIH2189115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002867119.1;locus_tag=ACYKJH_000997;product=DUF4878 domain-containing protein;protein_id=HIH2189115.1;transl_table=11 DBLQKK010000012.1 tpg gene 25987 27333 . + . ID=gene-ACYKJH_000998;Name=ACYKJH_000998;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000998 DBLQKK010000012.1 Protein Homology CDS 25987 27333 . + 0 ID=cds-HIH2189116.1;Parent=gene-ACYKJH_000998;Dbxref=NCBI_GP:HIH2189116.1;Name=HIH2189116.1;Ontology_term=GO:0046942,GO:1905039,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=carboxylic acid transport|0046942||IEA,carboxylic acid transmembrane transport|1905039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343661.1;locus_tag=ACYKJH_000998;product=CitMHS family transporter;protein_id=HIH2189116.1;transl_table=11 DBLQKK010000012.1 tpg gene 27517 29514 . + . ID=gene-ACYKJH_000999;Name=ACYKJH_000999;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_000999 DBLQKK010000012.1 Protein Homology CDS 27517 29514 . + 0 ID=cds-HIH2189117.1;Parent=gene-ACYKJH_000999;Dbxref=NCBI_GP:HIH2189117.1;Name=HIH2189117.1;Ontology_term=GO:0006857,GO:0035673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oligopeptide transmembrane transporter activity|0035673||IEA;go_process=oligopeptide transport|0006857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343662.1;locus_tag=ACYKJH_000999;product=OPT family oligopeptide transporter;protein_id=HIH2189117.1;transl_table=11 DBLQKK010000012.1 tpg gene 29588 30391 . + . ID=gene-ACYKJH_001000;Name=uppP;gbkey=Gene;gene=uppP;gene_biotype=protein_coding;locus_tag=ACYKJH_001000 DBLQKK010000012.1 Protein Homology CDS 29588 30391 . + 0 ID=cds-HIH2189118.1;Parent=gene-ACYKJH_001000;Dbxref=NCBI_GP:HIH2189118.1;Name=HIH2189118.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=uppP;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343663.1;locus_tag=ACYKJH_001000;product=undecaprenyl-diphosphate phosphatase;protein_id=HIH2189118.1;transl_table=11 DBLQKK010000012.1 tpg gene 30522 32330 . + . ID=gene-ACYKJH_001001;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=ACYKJH_001001 DBLQKK010000012.1 Protein Homology CDS 30522 32330 . + 0 ID=cds-HIH2189119.1;Parent=gene-ACYKJH_001001;Dbxref=NCBI_GP:HIH2189119.1;Name=HIH2189119.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343664.1;locus_tag=ACYKJH_001001;product=threonine--tRNA ligase;protein_id=HIH2189119.1;transl_table=11 DBLQKK010000012.1 tpg gene 32327 32845 . + . ID=gene-ACYKJH_001002;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=ACYKJH_001002 DBLQKK010000012.1 Protein Homology CDS 32327 32845 . + 0 ID=cds-HIH2189120.1;Parent=gene-ACYKJH_001002;Dbxref=NCBI_GP:HIH2189120.1;Name=HIH2189120.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343665.1;locus_tag=ACYKJH_001002;product=translation initiation factor IF-3;protein_id=HIH2189120.1;transl_table=11 DBLQKK010000012.1 tpg gene 32884 33975 . + . ID=gene-ACYKJH_001003;Name=ACYKJH_001003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001003 DBLQKK010000012.1 Protein Homology CDS 32884 33975 . + 0 ID=cds-HIH2189121.1;Parent=gene-ACYKJH_001003;Dbxref=NCBI_GP:HIH2189121.1;Name=HIH2189121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343666.1;locus_tag=ACYKJH_001003;product=DNA adenine methylase;protein_id=HIH2189121.1;transl_table=11 DBLQKK010000012.1 tpg pseudogene 34017 37408 . + . ID=gene-ACYKJH_001004;Name=ACYKJH_001004;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001004;pseudo=true DBLQKK010000012.1 Protein Homology CDS 34017 37408 . + 0 ID=cds-ACYKJH_001004;Parent=gene-ACYKJH_001004;Note=frameshifted%3B internal stop;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_172669436.1;locus_tag=ACYKJH_001004;product=S6 family peptidase;pseudo=true;transl_table=11 DBLQKK010000012.1 tpg gene 37489 38517 . + . ID=gene-ACYKJH_001005;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=ACYKJH_001005 DBLQKK010000012.1 Protein Homology CDS 37489 38517 . + 0 ID=cds-HIH2189122.1;Parent=gene-ACYKJH_001005;Dbxref=NCBI_GP:HIH2189122.1;Name=HIH2189122.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343667.1;locus_tag=ACYKJH_001005;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=HIH2189122.1;transl_table=11 DBLQKK010000012.1 tpg gene 38527 38973 . + . ID=gene-ACYKJH_001006;Name=ACYKJH_001006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001006 DBLQKK010000012.1 Protein Homology CDS 38527 38973 . + 0 ID=cds-HIH2189123.1;Parent=gene-ACYKJH_001006;Dbxref=NCBI_GP:HIH2189123.1;Name=HIH2189123.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343668.1;locus_tag=ACYKJH_001006;product=GNAT family N-acetyltransferase;protein_id=HIH2189123.1;transl_table=11 DBLQKK010000012.1 tpg gene 38977 39822 . + . ID=gene-ACYKJH_001007;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=ACYKJH_001007 DBLQKK010000012.1 Protein Homology CDS 38977 39822 . + 0 ID=cds-HIH2189124.1;Parent=gene-ACYKJH_001007;Dbxref=NCBI_GP:HIH2189124.1;Name=HIH2189124.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343669.1;locus_tag=ACYKJH_001007;product=acetylglutamate kinase;protein_id=HIH2189124.1;transl_table=11 DBLQKK010000012.1 tpg gene 39826 41013 . + . ID=gene-ACYKJH_001008;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;locus_tag=ACYKJH_001008 DBLQKK010000012.1 Protein Homology CDS 39826 41013 . + 0 ID=cds-HIH2189125.1;Parent=gene-ACYKJH_001008;Dbxref=NCBI_GP:HIH2189125.1;Name=HIH2189125.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;gene=argD;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343670.1;locus_tag=ACYKJH_001008;product=aspartate aminotransferase family protein;protein_id=HIH2189125.1;transl_table=11 DBLQKK010000012.1 tpg gene 41033 41662 . - . ID=gene-ACYKJH_001009;Name=pcm;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=ACYKJH_001009 DBLQKK010000012.1 Protein Homology CDS 41033 41662 . - 0 ID=cds-HIH2189126.1;Parent=gene-ACYKJH_001009;Dbxref=NCBI_GP:HIH2189126.1;Name=HIH2189126.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;gene=pcm;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343671.1;locus_tag=ACYKJH_001009;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=HIH2189126.1;transl_table=11 DBLQKK010000012.1 tpg gene 41751 42299 . + . ID=gene-ACYKJH_001010;Name=ACYKJH_001010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001010 DBLQKK010000012.1 Protein Homology CDS 41751 42299 . + 0 ID=cds-HIH2189127.1;Parent=gene-ACYKJH_001010;Dbxref=NCBI_GP:HIH2189127.1;Name=HIH2189127.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343672.1;locus_tag=ACYKJH_001010;product=gamma carbonic anhydrase family protein;protein_id=HIH2189127.1;transl_table=11 DBLQKK010000012.1 tpg gene 42268 43641 . - . ID=gene-ACYKJH_001011;Name=ACYKJH_001011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001011 DBLQKK010000012.1 Protein Homology CDS 42268 43641 . - 0 ID=cds-HIH2189128.1;Parent=gene-ACYKJH_001011;Dbxref=NCBI_GP:HIH2189128.1;Name=HIH2189128.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343673.1;locus_tag=ACYKJH_001011;product=nicotinate phosphoribosyltransferase;protein_id=HIH2189128.1;transl_table=11 DBLQKK010000012.1 tpg gene 43628 44650 . - . ID=gene-ACYKJH_001012;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=ACYKJH_001012 DBLQKK010000012.1 Protein Homology CDS 43628 44650 . - 0 ID=cds-HIH2189129.1;Parent=gene-ACYKJH_001012;Dbxref=NCBI_GP:HIH2189129.1;Name=HIH2189129.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343674.1;locus_tag=ACYKJH_001012;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=HIH2189129.1;transl_table=11 DBLQKK010000012.1 tpg gene 44653 45075 . - . ID=gene-ACYKJH_001013;Name=ACYKJH_001013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001013 DBLQKK010000012.1 Protein Homology CDS 44653 45075 . - 0 ID=cds-HIH2189130.1;Parent=gene-ACYKJH_001013;Dbxref=NCBI_GP:HIH2189130.1;Name=HIH2189130.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002867136.1;locus_tag=ACYKJH_001013;product=RDD family protein;protein_id=HIH2189130.1;transl_table=11 DBLQKK010000012.1 tpg gene 45076 45684 . - . ID=gene-ACYKJH_001014;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=ACYKJH_001014 DBLQKK010000012.1 Protein Homology CDS 45076 45684 . - 0 ID=cds-HIH2189131.1;Parent=gene-ACYKJH_001014;Dbxref=NCBI_GP:HIH2189131.1;Name=HIH2189131.1;Ontology_term=GO:0019856,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343676.1;locus_tag=ACYKJH_001014;product=orotate phosphoribosyltransferase;protein_id=HIH2189131.1;transl_table=11 DBLQKK010000012.1 tpg gene 45687 46250 . - . ID=gene-ACYKJH_001015;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=ACYKJH_001015 DBLQKK010000012.1 Protein Homology CDS 45687 46250 . - 0 ID=cds-HIH2189132.1;Parent=gene-ACYKJH_001015;Dbxref=NCBI_GP:HIH2189132.1;Name=HIH2189132.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343677.1;locus_tag=ACYKJH_001015;product=ribosome recycling factor;protein_id=HIH2189132.1;transl_table=11 DBLQKK010000012.1 tpg gene 46260 46631 . - . ID=gene-ACYKJH_001016;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=ACYKJH_001016 DBLQKK010000012.1 Protein Homology CDS 46260 46631 . - 0 ID=cds-HIH2189133.1;Parent=gene-ACYKJH_001016;Dbxref=NCBI_GP:HIH2189133.1;Name=HIH2189133.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343678.1;locus_tag=ACYKJH_001016;product=preprotein translocase subunit SecG;protein_id=HIH2189133.1;transl_table=11 DBLQKK010000012.1 tpg gene 46735 47430 . - . ID=gene-ACYKJH_001017;Name=ACYKJH_001017;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001017 DBLQKK010000012.1 Protein Homology CDS 46735 47430 . - 0 ID=cds-HIH2189134.1;Parent=gene-ACYKJH_001017;Dbxref=NCBI_GP:HIH2189134.1;Name=HIH2189134.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343679.1;locus_tag=ACYKJH_001017;product=Bax inhibitor-1/YccA family protein;protein_id=HIH2189134.1;transl_table=11 DBLQKK010000012.1 tpg gene 47591 48226 . + . ID=gene-ACYKJH_001018;Name=cynT;gbkey=Gene;gene=cynT;gene_biotype=protein_coding;locus_tag=ACYKJH_001018 DBLQKK010000012.1 Protein Homology CDS 47591 48226 . + 0 ID=cds-HIH2189135.1;Parent=gene-ACYKJH_001018;Dbxref=NCBI_GP:HIH2189135.1;Name=HIH2189135.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;gene=cynT;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343680.1;locus_tag=ACYKJH_001018;product=carbonic anhydrase;protein_id=HIH2189135.1;transl_table=11 DBLQKK010000012.1 tpg gene 48223 50106 . + . ID=gene-ACYKJH_001019;Name=ACYKJH_001019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001019 DBLQKK010000012.1 Protein Homology CDS 48223 50106 . + 0 ID=cds-HIH2189136.1;Parent=gene-ACYKJH_001019;Dbxref=NCBI_GP:HIH2189136.1;Name=HIH2189136.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343681.1;locus_tag=ACYKJH_001019;product=mechanosensitive ion channel family protein;protein_id=HIH2189136.1;transl_table=11 DBLQKK010000012.1 tpg gene 50129 51100 . - . ID=gene-ACYKJH_001020;Name=ACYKJH_001020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001020 DBLQKK010000012.1 Protein Homology CDS 50129 51100 . - 0 ID=cds-HIH2189137.1;Parent=gene-ACYKJH_001020;Dbxref=NCBI_GP:HIH2189137.1;Name=HIH2189137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343682.1;locus_tag=ACYKJH_001020;product=iron-sulfur cluster assembly scaffold protein NifU;protein_id=HIH2189137.1;transl_table=11 DBLQKK010000012.1 tpg gene 51110 52291 . - . ID=gene-ACYKJH_001021;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=ACYKJH_001021 DBLQKK010000012.1 Protein Homology CDS 51110 52291 . - 0 ID=cds-HIH2189138.1;Parent=gene-ACYKJH_001021;Dbxref=NCBI_GP:HIH2189138.1;Name=HIH2189138.1;Ontology_term=GO:0006534,GO:0031071;gbkey=CDS;gene=iscS;go_function=cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343683.1;locus_tag=ACYKJH_001021;product=NifS family cysteine desulfurase;protein_id=HIH2189138.1;transl_table=11 DBLQKK010000012.1 tpg gene 52469 52870 . - . ID=gene-ACYKJH_001022;Name=ACYKJH_001022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001022 DBLQKK010000012.1 Protein Homology CDS 52469 52870 . - 0 ID=cds-HIH2189139.1;Parent=gene-ACYKJH_001022;Dbxref=NCBI_GP:HIH2189139.1;Name=HIH2189139.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343684.1;locus_tag=ACYKJH_001022;product=hemerythrin domain-containing protein;protein_id=HIH2189139.1;transl_table=11 ##sequence-region DBLQKK010000013.1 1 51132 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000013.1 tpg region 1 51132 . + . ID=DBLQKK010000013.1:1..51132;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000013.1 tpg gene 79 750 . + . ID=gene-ACYKJH_001023;Name=racR;gbkey=Gene;gene=racR;gene_biotype=protein_coding;locus_tag=ACYKJH_001023 DBLQKK010000013.1 Protein Homology CDS 79 750 . + 0 ID=cds-HIH2189140.1;Parent=gene-ACYKJH_001023;Dbxref=NCBI_GP:HIH2189140.1;Name=HIH2189140.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;gene=racR;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344652.1;locus_tag=ACYKJH_001023;product=response regulator transcription factor;protein_id=HIH2189140.1;transl_table=11 DBLQKK010000013.1 tpg gene 747 1982 . + . ID=gene-ACYKJH_001024;Name=racS;gbkey=Gene;gene=racS;gene_biotype=protein_coding;locus_tag=ACYKJH_001024 DBLQKK010000013.1 Protein Homology CDS 747 1982 . + 0 ID=cds-HIH2189141.1;Parent=gene-ACYKJH_001024;Dbxref=NCBI_GP:HIH2189141.1;Name=HIH2189141.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=racS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344653.1;locus_tag=ACYKJH_001024;product=ArsS family sensor histidine kinase;protein_id=HIH2189141.1;transl_table=11 DBLQKK010000013.1 tpg gene 1982 2554 . + . ID=gene-ACYKJH_001025;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=ACYKJH_001025 DBLQKK010000013.1 Protein Homology CDS 1982 2554 . + 0 ID=cds-HIH2189142.1;Parent=gene-ACYKJH_001025;Dbxref=NCBI_GP:HIH2189142.1;Name=HIH2189142.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344654.1;locus_tag=ACYKJH_001025;product=recombination mediator RecR;protein_id=HIH2189142.1;transl_table=11 DBLQKK010000013.1 tpg gene 2551 3087 . - . ID=gene-ACYKJH_001026;Name=hydD;gbkey=Gene;gene=hydD;gene_biotype=protein_coding;locus_tag=ACYKJH_001026 DBLQKK010000013.1 Protein Homology CDS 2551 3087 . - 0 ID=cds-HIH2189143.1;Parent=gene-ACYKJH_001026;Dbxref=NCBI_GP:HIH2189143.1;Name=HIH2189143.1;gbkey=CDS;gene=hydD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344655.1;locus_tag=ACYKJH_001026;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=HIH2189143.1;transl_table=11 DBLQKK010000013.1 tpg gene 3084 3776 . - . ID=gene-ACYKJH_001027;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=ACYKJH_001027 DBLQKK010000013.1 Protein Homology CDS 3084 3776 . - 0 ID=cds-HIH2189144.1;Parent=gene-ACYKJH_001027;Dbxref=NCBI_GP:HIH2189144.1;Name=HIH2189144.1;Ontology_term=GO:0022904,GO:0005506,GO:0009055,GO:0016020;gbkey=CDS;gene=cybH;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344656.1;locus_tag=ACYKJH_001027;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=HIH2189144.1;transl_table=11 DBLQKK010000013.1 tpg gene 3787 5502 . - . ID=gene-ACYKJH_001028;Name=hydB;gbkey=Gene;gene=hydB;gene_biotype=protein_coding;locus_tag=ACYKJH_001028 DBLQKK010000013.1 Protein Homology CDS 3787 5502 . - 0 ID=cds-HIH2189145.1;Parent=gene-ACYKJH_001028;Dbxref=NCBI_GP:HIH2189145.1;Name=HIH2189145.1;gbkey=CDS;gene=hydB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344657.1;locus_tag=ACYKJH_001028;product=nickel-dependent hydrogenase large subunit;protein_id=HIH2189145.1;transl_table=11 DBLQKK010000013.1 tpg gene 5505 6644 . - . ID=gene-ACYKJH_001029;Name=hydA;gbkey=Gene;gene=hydA;gene_biotype=protein_coding;locus_tag=ACYKJH_001029 DBLQKK010000013.1 Protein Homology CDS 5505 6644 . - 0 ID=cds-HIH2189146.1;Parent=gene-ACYKJH_001029;Dbxref=NCBI_GP:HIH2189146.1;Name=HIH2189146.1;gbkey=CDS;gene=hydA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344658.1;locus_tag=ACYKJH_001029;product=hydrogenase small subunit;protein_id=HIH2189146.1;transl_table=11 DBLQKK010000013.1 tpg gene 6764 8605 . - . ID=gene-ACYKJH_001030;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=ACYKJH_001030 DBLQKK010000013.1 Protein Homology CDS 6764 8605 . - 0 ID=cds-HIH2189147.1;Parent=gene-ACYKJH_001030;Dbxref=NCBI_GP:HIH2189147.1;Name=HIH2189147.1;Ontology_term=GO:0008033,GO:0004808,GO:0016645;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity%2C acting on the CH-NH group of donors|0016645||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344659.1;locus_tag=ACYKJH_001030;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=HIH2189147.1;transl_table=11 DBLQKK010000013.1 tpg gene 8602 10581 . - . ID=gene-ACYKJH_001031;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=ACYKJH_001031 DBLQKK010000013.1 Protein Homology CDS 8602 10581 . - 0 ID=cds-HIH2189148.1;Parent=gene-ACYKJH_001031;Dbxref=NCBI_GP:HIH2189148.1;Name=HIH2189148.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344660.1;locus_tag=ACYKJH_001031;product=N-acetylmuramoyl-L-alanine amidase;protein_id=HIH2189148.1;transl_table=11 DBLQKK010000013.1 tpg gene 10581 11672 . - . ID=gene-ACYKJH_001032;Name=ACYKJH_001032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001032 DBLQKK010000013.1 Protein Homology CDS 10581 11672 . - 0 ID=cds-HIH2189149.1;Parent=gene-ACYKJH_001032;Dbxref=NCBI_GP:HIH2189149.1;Name=HIH2189149.1;Ontology_term=GO:0018580;gbkey=CDS;go_function=nitronate monooxygenase activity|0018580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344661.1;locus_tag=ACYKJH_001032;product=nitronate monooxygenase;protein_id=HIH2189149.1;transl_table=11 DBLQKK010000013.1 tpg gene 11669 12874 . - . ID=gene-ACYKJH_001033;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=ACYKJH_001033 DBLQKK010000013.1 Protein Homology CDS 11669 12874 . - 0 ID=cds-HIH2189150.1;Parent=gene-ACYKJH_001033;Dbxref=NCBI_GP:HIH2189150.1;Name=HIH2189150.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344662.1;locus_tag=ACYKJH_001033;product=tyrosine--tRNA ligase;protein_id=HIH2189150.1;transl_table=11 DBLQKK010000013.1 tpg gene 12886 15081 . - . ID=gene-ACYKJH_001034;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=ACYKJH_001034 DBLQKK010000013.1 Protein Homology CDS 12886 15081 . - 0 ID=cds-HIH2189151.1;Parent=gene-ACYKJH_001034;Dbxref=NCBI_GP:HIH2189151.1;Name=HIH2189151.1;Ontology_term=GO:0015970,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002867343.1;locus_tag=ACYKJH_001034;product=RelA/SpoT family protein;protein_id=HIH2189151.1;transl_table=11 DBLQKK010000013.1 tpg gene 15065 15289 . - . ID=gene-ACYKJH_001035;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=ACYKJH_001035 DBLQKK010000013.1 Protein Homology CDS 15065 15289 . - 0 ID=cds-HIH2189152.1;Parent=gene-ACYKJH_001035;Dbxref=NCBI_GP:HIH2189152.1;Name=HIH2189152.1;gbkey=CDS;gene=rpoZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344664.1;locus_tag=ACYKJH_001035;product=DNA-directed RNA polymerase subunit omega;protein_id=HIH2189152.1;transl_table=11 DBLQKK010000013.1 tpg gene 15300 16019 . - . ID=gene-ACYKJH_001036;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=ACYKJH_001036 DBLQKK010000013.1 Protein Homology CDS 15300 16019 . - 0 ID=cds-HIH2189153.1;Parent=gene-ACYKJH_001036;Dbxref=NCBI_GP:HIH2189153.1;Name=HIH2189153.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344665.1;locus_tag=ACYKJH_001036;product=UMP kinase;protein_id=HIH2189153.1;transl_table=11 DBLQKK010000013.1 tpg gene 16071 17264 . - . ID=gene-ACYKJH_001037;Name=ACYKJH_001037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001037 DBLQKK010000013.1 Protein Homology CDS 16071 17264 . - 0 ID=cds-HIH2189154.1;Parent=gene-ACYKJH_001037;Dbxref=NCBI_GP:HIH2189154.1;Name=HIH2189154.1;Ontology_term=GO:0006508,GO:0004222,GO:0016787,GO:0046872;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344666.1;locus_tag=ACYKJH_001037;product=murein hydrolase activator EnvC family protein;protein_id=HIH2189154.1;transl_table=11 DBLQKK010000013.1 tpg gene 17261 18067 . - . ID=gene-ACYKJH_001038;Name=ACYKJH_001038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001038 DBLQKK010000013.1 Protein Homology CDS 17261 18067 . - 0 ID=cds-HIH2189155.1;Parent=gene-ACYKJH_001038;Dbxref=NCBI_GP:HIH2189155.1;Name=HIH2189155.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344667.1;locus_tag=ACYKJH_001038;product=ABC transporter permease;protein_id=HIH2189155.1;transl_table=11 DBLQKK010000013.1 tpg gene 18054 18719 . - . ID=gene-ACYKJH_001039;Name=ACYKJH_001039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001039 DBLQKK010000013.1 Protein Homology CDS 18054 18719 . - 0 ID=cds-HIH2189156.1;Parent=gene-ACYKJH_001039;Dbxref=NCBI_GP:HIH2189156.1;Name=HIH2189156.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344668.1;locus_tag=ACYKJH_001039;product=cell division ATP-binding protein FtsE;protein_id=HIH2189156.1;transl_table=11 DBLQKK010000013.1 tpg gene 18789 19967 . - . ID=gene-ACYKJH_001040;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=ACYKJH_001040 DBLQKK010000013.1 Protein Homology CDS 18789 19967 . - 0 ID=cds-HIH2189157.1;Parent=gene-ACYKJH_001040;Dbxref=NCBI_GP:HIH2189157.1;Name=HIH2189157.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344669.1;locus_tag=ACYKJH_001040;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=HIH2189157.1;transl_table=11 DBLQKK010000013.1 tpg gene 19967 21202 . - . ID=gene-ACYKJH_001041;Name=ACYKJH_001041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001041 DBLQKK010000013.1 Protein Homology CDS 19967 21202 . - 0 ID=cds-HIH2189158.1;Parent=gene-ACYKJH_001041;Dbxref=NCBI_GP:HIH2189158.1;Name=HIH2189158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344670.1;locus_tag=ACYKJH_001041;product=fibronectin type III domain-containing protein;protein_id=HIH2189158.1;transl_table=11 DBLQKK010000013.1 tpg gene 21147 22115 . - . ID=gene-ACYKJH_001042;Name=ACYKJH_001042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001042 DBLQKK010000013.1 Protein Homology CDS 21147 22115 . - 0 ID=cds-HIH2189159.1;Parent=gene-ACYKJH_001042;Dbxref=NCBI_GP:HIH2189159.1;Name=HIH2189159.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344671.1;locus_tag=ACYKJH_001042;product=RluA family pseudouridine synthase;protein_id=HIH2189159.1;transl_table=11 DBLQKK010000013.1 tpg gene 22193 23293 . + . ID=gene-ACYKJH_001043;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;locus_tag=ACYKJH_001043 DBLQKK010000013.1 Protein Homology CDS 22193 23293 . + 0 ID=cds-HIH2189160.1;Parent=gene-ACYKJH_001043;Dbxref=NCBI_GP:HIH2189160.1;Name=HIH2189160.1;Ontology_term=GO:0008360,GO:0008955;gbkey=CDS;gene=mrdB;go_function=peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344672.1;locus_tag=ACYKJH_001043;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=HIH2189160.1;transl_table=11 DBLQKK010000013.1 tpg gene 23347 23423 . + . ID=gene-ACYKJH_001044;Name=ACYKJH_001044;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_001044 DBLQKK010000013.1 tRNAscan-SE tRNA 23347 23423 . + . ID=rna-ACYKJH_001044;Parent=gene-ACYKJH_001044;anticodon=(pos:23381..23383);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_001044;product=tRNA-Ile DBLQKK010000013.1 tRNAscan-SE exon 23347 23423 . + . ID=exon-ACYKJH_001044-1;Parent=rna-ACYKJH_001044;anticodon=(pos:23381..23383);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_001044;product=tRNA-Ile DBLQKK010000013.1 tpg gene 23532 23607 . - . ID=gene-ACYKJH_001045;Name=ACYKJH_001045;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_001045 DBLQKK010000013.1 tRNAscan-SE tRNA 23532 23607 . - . ID=rna-ACYKJH_001045;Parent=gene-ACYKJH_001045;anticodon=(pos:complement(23572..23574));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_001045;product=tRNA-Phe DBLQKK010000013.1 tRNAscan-SE exon 23532 23607 . - . ID=exon-ACYKJH_001045-1;Parent=rna-ACYKJH_001045;anticodon=(pos:complement(23572..23574));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_001045;product=tRNA-Phe DBLQKK010000013.1 tpg gene 23747 25090 . + . ID=gene-ACYKJH_001046;Name=ktrB;gbkey=Gene;gene=ktrB;gene_biotype=protein_coding;locus_tag=ACYKJH_001046 DBLQKK010000013.1 Protein Homology CDS 23747 25090 . + 0 ID=cds-HIH2189161.1;Parent=gene-ACYKJH_001046;Dbxref=NCBI_GP:HIH2189161.1;Name=HIH2189161.1;gbkey=CDS;gene=ktrB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344673.1;locus_tag=ACYKJH_001046;product=TrkH family potassium uptake protein;protein_id=HIH2189161.1;transl_table=11 DBLQKK010000013.1 tpg gene 25101 25751 . + . ID=gene-ACYKJH_001047;Name=ktrA;gbkey=Gene;gene=ktrA;gene_biotype=protein_coding;locus_tag=ACYKJH_001047 DBLQKK010000013.1 Protein Homology CDS 25101 25751 . + 0 ID=cds-HIH2189162.1;Parent=gene-ACYKJH_001047;Dbxref=NCBI_GP:HIH2189162.1;Name=HIH2189162.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;gene=ktrA;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344674.1;locus_tag=ACYKJH_001047;product=potassium channel family protein;protein_id=HIH2189162.1;transl_table=11 DBLQKK010000013.1 tpg gene 25748 26419 . - . ID=gene-ACYKJH_001048;Name=ACYKJH_001048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001048 DBLQKK010000013.1 Protein Homology CDS 25748 26419 . - 0 ID=cds-HIH2189163.1;Parent=gene-ACYKJH_001048;Dbxref=NCBI_GP:HIH2189163.1;Name=HIH2189163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344675.1;locus_tag=ACYKJH_001048;product=MqnA/MqnD/SBP family protein;protein_id=HIH2189163.1;transl_table=11 DBLQKK010000013.1 tpg gene 26425 27051 . - . ID=gene-ACYKJH_001049;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=ACYKJH_001049 DBLQKK010000013.1 Protein Homology CDS 26425 27051 . - 0 ID=cds-HIH2189164.1;Parent=gene-ACYKJH_001049;Dbxref=NCBI_GP:HIH2189164.1;Name=HIH2189164.1;Ontology_term=GO:0006223,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=uracil salvage|0006223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344676.1;locus_tag=ACYKJH_001049;product=uracil phosphoribosyltransferase;protein_id=HIH2189164.1;transl_table=11 DBLQKK010000013.1 tpg gene 27048 28283 . - . ID=gene-ACYKJH_001050;Name=ACYKJH_001050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001050 DBLQKK010000013.1 Protein Homology CDS 27048 28283 . - 0 ID=cds-HIH2189165.1;Parent=gene-ACYKJH_001050;Dbxref=NCBI_GP:HIH2189165.1;Name=HIH2189165.1;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344677.1;locus_tag=ACYKJH_001050;product=malic enzyme-like NAD(P)-binding protein;protein_id=HIH2189165.1;transl_table=11 DBLQKK010000013.1 tpg gene 28285 29676 . - . ID=gene-ACYKJH_001051;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=ACYKJH_001051 DBLQKK010000013.1 Protein Homology CDS 28285 29676 . - 0 ID=cds-HIH2189166.1;Parent=gene-ACYKJH_001051;Dbxref=NCBI_GP:HIH2189166.1;Name=HIH2189166.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344678.1;locus_tag=ACYKJH_001051;product=glutamate--tRNA ligase;protein_id=HIH2189166.1;transl_table=11 DBLQKK010000013.1 tpg gene 29741 30556 . + . ID=gene-ACYKJH_001052;Name=salC;gbkey=Gene;gene=salC;gene_biotype=protein_coding;locus_tag=ACYKJH_001052 DBLQKK010000013.1 Protein Homology CDS 29741 30556 . + 0 ID=cds-HIH2189167.1;Parent=gene-ACYKJH_001052;Dbxref=NCBI_GP:HIH2189167.1;Name=HIH2189167.1;gbkey=CDS;gene=salC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344679.1;locus_tag=ACYKJH_001052;product=peptidylprolyl isomerase SalC;protein_id=HIH2189167.1;transl_table=11 DBLQKK010000013.1 tpg gene 30593 31924 . - . ID=gene-ACYKJH_001053;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=ACYKJH_001053 DBLQKK010000013.1 Protein Homology CDS 30593 31924 . - 0 ID=cds-HIH2189168.1;Parent=gene-ACYKJH_001053;Dbxref=NCBI_GP:HIH2189168.1;Name=HIH2189168.1;Ontology_term=GO:0003824;gbkey=CDS;gene=accC;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344680.1;locus_tag=ACYKJH_001053;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=HIH2189168.1;transl_table=11 DBLQKK010000013.1 tpg gene 31926 32381 . - . ID=gene-ACYKJH_001054;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=ACYKJH_001054 DBLQKK010000013.1 Protein Homology CDS 31926 32381 . - 0 ID=cds-HIH2189169.1;Parent=gene-ACYKJH_001054;Dbxref=NCBI_GP:HIH2189169.1;Name=HIH2189169.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344681.1;locus_tag=ACYKJH_001054;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=HIH2189169.1;transl_table=11 DBLQKK010000013.1 tpg gene 32529 33089 . + . ID=gene-ACYKJH_001055;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=ACYKJH_001055 DBLQKK010000013.1 Protein Homology CDS 32529 33089 . + 0 ID=cds-HIH2189170.1;Parent=gene-ACYKJH_001055;Dbxref=NCBI_GP:HIH2189170.1;Name=HIH2189170.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344682.1;locus_tag=ACYKJH_001055;product=dCTP deaminase;protein_id=HIH2189170.1;transl_table=11 DBLQKK010000013.1 tpg gene 33138 34142 . + . ID=gene-ACYKJH_001056;Name=pseB;gbkey=Gene;gene=pseB;gene_biotype=protein_coding;locus_tag=ACYKJH_001056 DBLQKK010000013.1 Protein Homology CDS 33138 34142 . + 0 ID=cds-HIH2189171.1;Parent=gene-ACYKJH_001056;Dbxref=NCBI_GP:HIH2189171.1;Name=HIH2189171.1;gbkey=CDS;gene=pseB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344683.1;locus_tag=ACYKJH_001056;product=UDP-N-acetylglucosamine 4%2C6-dehydratase (inverting);protein_id=HIH2189171.1;transl_table=11 DBLQKK010000013.1 tpg gene 34144 35274 . + . ID=gene-ACYKJH_001057;Name=pseC;gbkey=Gene;gene=pseC;gene_biotype=protein_coding;locus_tag=ACYKJH_001057 DBLQKK010000013.1 Protein Homology CDS 34144 35274 . + 0 ID=cds-HIH2189172.1;Parent=gene-ACYKJH_001057;Dbxref=NCBI_GP:HIH2189172.1;Name=HIH2189172.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pseC;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344684.1;locus_tag=ACYKJH_001057;product=UDP-4-amino-4%2C6-dideoxy-N-acetyl-beta-L-altrosamine transaminase;protein_id=HIH2189172.1;transl_table=11 DBLQKK010000013.1 tpg pseudogene 35267 36578 . + . ID=gene-ACYKJH_001058;Name=ACYKJH_001058;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001058;pseudo=true DBLQKK010000013.1 Protein Homology CDS 35267 36578 . + 0 ID=cds-ACYKJH_001058;Parent=gene-ACYKJH_001058;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344685.1;locus_tag=ACYKJH_001058;product=DUF4910 domain-containing protein;pseudo=true;transl_table=11 DBLQKK010000013.1 tpg gene 36575 37360 . + . ID=gene-ACYKJH_001059;Name=ACYKJH_001059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001059 DBLQKK010000013.1 Protein Homology CDS 36575 37360 . + 0 ID=cds-HIH2189173.1;Parent=gene-ACYKJH_001059;Dbxref=NCBI_GP:HIH2189173.1;Name=HIH2189173.1;Ontology_term=GO:0046677,GO:0046353;gbkey=CDS;go_function=aminoglycoside 3-N-acetyltransferase activity|0046353||IEA;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002884337.1;locus_tag=ACYKJH_001059;product=AAC(3) family N-acetyltransferase;protein_id=HIH2189173.1;transl_table=11 DBLQKK010000013.1 tpg gene 37357 37587 . + . ID=gene-ACYKJH_001060;Name=ACYKJH_001060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001060 DBLQKK010000013.1 Protein Homology CDS 37357 37587 . + 0 ID=cds-HIH2189174.1;Parent=gene-ACYKJH_001060;Dbxref=NCBI_GP:HIH2189174.1;Name=HIH2189174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344689.1;locus_tag=ACYKJH_001060;product=acyl carrier protein;protein_id=HIH2189174.1;transl_table=11 DBLQKK010000013.1 tpg gene 37584 37967 . + . ID=gene-ACYKJH_001061;Name=ACYKJH_001061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001061 DBLQKK010000013.1 Protein Homology CDS 37584 37967 . + 0 ID=cds-HIH2189175.1;Parent=gene-ACYKJH_001061;Dbxref=NCBI_GP:HIH2189175.1;Name=HIH2189175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344690.1;locus_tag=ACYKJH_001061;product=hypothetical protein;protein_id=HIH2189175.1;transl_table=11 DBLQKK010000013.1 tpg pseudogene 37960 38375 . + . ID=gene-ACYKJH_001062;Name=ACYKJH_001062;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001062;pseudo=true DBLQKK010000013.1 Protein Homology CDS 37960 38375 . + 0 ID=cds-ACYKJH_001062;Parent=gene-ACYKJH_001062;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344691.1;locus_tag=ACYKJH_001062;product=VOC family protein;pseudo=true;transl_table=11 DBLQKK010000013.1 tpg pseudogene 38372 39933 . + . ID=gene-ACYKJH_001063;Name=ACYKJH_001063;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001063;pseudo=true DBLQKK010000013.1 Protein Homology CDS 38372 39933 . + 0 ID=cds-ACYKJH_001063;Parent=gene-ACYKJH_001063;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344692.1;locus_tag=ACYKJH_001063;product=HAD family hydrolase;pseudo=true;transl_table=11 DBLQKK010000013.1 tpg pseudogene 39923 40982 . + . ID=gene-ACYKJH_001064;Name=ACYKJH_001064;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001064;pseudo=true DBLQKK010000013.1 Protein Homology CDS 39923 40982 . + 0 ID=cds-ACYKJH_001064;Parent=gene-ACYKJH_001064;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344693.1;locus_tag=ACYKJH_001064;product=beta-ketoacyl-ACP synthase III;pseudo=true;transl_table=11 DBLQKK010000013.1 tpg gene 40982 41203 . + . ID=gene-ACYKJH_001065;Name=ACYKJH_001065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001065 DBLQKK010000013.1 Protein Homology CDS 40982 41203 . + 0 ID=cds-HIH2189176.1;Parent=gene-ACYKJH_001065;Dbxref=NCBI_GP:HIH2189176.1;Name=HIH2189176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344694.1;locus_tag=ACYKJH_001065;product=acyl carrier protein;protein_id=HIH2189176.1;transl_table=11 DBLQKK010000013.1 tpg gene 41217 42446 . - . ID=gene-ACYKJH_001066;Name=ACYKJH_001066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001066 DBLQKK010000013.1 Protein Homology CDS 41217 42446 . - 0 ID=cds-HIH2189177.1;Parent=gene-ACYKJH_001066;Dbxref=NCBI_GP:HIH2189177.1;Name=HIH2189177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002865679.1;locus_tag=ACYKJH_001066;product=DUF2920 family protein;protein_id=HIH2189177.1;transl_table=11 DBLQKK010000013.1 tpg gene 42507 44015 . + . ID=gene-ACYKJH_001067;Name=ACYKJH_001067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001067 DBLQKK010000013.1 Protein Homology CDS 42507 44015 . + 0 ID=cds-HIH2189178.1;Parent=gene-ACYKJH_001067;Dbxref=NCBI_GP:HIH2189178.1;Name=HIH2189178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344697.1;locus_tag=ACYKJH_001067;product=AMP-binding protein;protein_id=HIH2189178.1;transl_table=11 DBLQKK010000013.1 tpg gene 44055 44282 . + . ID=gene-ACYKJH_001068;Name=ACYKJH_001068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001068 DBLQKK010000013.1 Protein Homology CDS 44055 44282 . + 0 ID=cds-HIH2189179.1;Parent=gene-ACYKJH_001068;Dbxref=NCBI_GP:HIH2189179.1;Name=HIH2189179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344698.1;locus_tag=ACYKJH_001068;product=acyl carrier protein;protein_id=HIH2189179.1;transl_table=11 DBLQKK010000013.1 tpg gene 44279 45349 . - . ID=gene-ACYKJH_001069;Name=ACYKJH_001069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001069 DBLQKK010000013.1 Protein Homology CDS 44279 45349 . - 0 ID=cds-HIH2189180.1;Parent=gene-ACYKJH_001069;Dbxref=NCBI_GP:HIH2189180.1;Name=HIH2189180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344699.1;locus_tag=ACYKJH_001069;product=acyl carrier protein;protein_id=HIH2189180.1;transl_table=11 DBLQKK010000013.1 tpg gene 45371 46585 . - . ID=gene-ACYKJH_001070;Name=ACYKJH_001070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001070 DBLQKK010000013.1 Protein Homology CDS 45371 46585 . - 0 ID=cds-HIH2189181.1;Parent=gene-ACYKJH_001070;Dbxref=NCBI_GP:HIH2189181.1;Name=HIH2189181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344700.1;locus_tag=ACYKJH_001070;product=DUF2920 family protein;protein_id=HIH2189181.1;transl_table=11 DBLQKK010000013.1 tpg gene 46677 47375 . + . ID=gene-ACYKJH_001071;Name=pseF;gbkey=Gene;gene=pseF;gene_biotype=protein_coding;locus_tag=ACYKJH_001071 DBLQKK010000013.1 Protein Homology CDS 46677 47375 . + 0 ID=cds-HIH2189182.1;Parent=gene-ACYKJH_001071;Dbxref=NCBI_GP:HIH2189182.1;Name=HIH2189182.1;Ontology_term=GO:0070567;gbkey=CDS;gene=pseF;go_function=cytidylyltransferase activity|0070567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344701.1;locus_tag=ACYKJH_001071;product=pseudaminic acid cytidylyltransferase;protein_id=HIH2189182.1;transl_table=11 DBLQKK010000013.1 tpg gene 47359 48183 . + . ID=gene-ACYKJH_001072;Name=pseG;gbkey=Gene;gene=pseG;gene_biotype=protein_coding;locus_tag=ACYKJH_001072 DBLQKK010000013.1 Protein Homology CDS 47359 48183 . + 0 ID=cds-HIH2189183.1;Parent=gene-ACYKJH_001072;Dbxref=NCBI_GP:HIH2189183.1;Name=HIH2189183.1;Ontology_term=GO:0016758;gbkey=CDS;gene=pseG;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344702.1;locus_tag=ACYKJH_001072;product=UDP-2%2C4-diacetamido-2%2C4%2C6-trideoxy-beta-L-altropyranose hydrolase;protein_id=HIH2189183.1;transl_table=11 DBLQKK010000013.1 tpg gene 48180 48653 . + . ID=gene-ACYKJH_001073;Name=pseH;gbkey=Gene;gene=pseH;gene_biotype=protein_coding;locus_tag=ACYKJH_001073 DBLQKK010000013.1 Protein Homology CDS 48180 48653 . + 0 ID=cds-HIH2189184.1;Parent=gene-ACYKJH_001073;Dbxref=NCBI_GP:HIH2189184.1;Name=HIH2189184.1;Ontology_term=GO:0009058,GO:0008080;gbkey=CDS;gene=pseH;go_function=N-acetyltransferase activity|0008080||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344703.1;locus_tag=ACYKJH_001073;product=UDP-4-amino-4%2C6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase;protein_id=HIH2189184.1;transl_table=11 DBLQKK010000013.1 tpg gene 48618 49364 . - . ID=gene-ACYKJH_001074;Name=ACYKJH_001074;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001074 DBLQKK010000013.1 Protein Homology CDS 48618 49364 . - 0 ID=cds-HIH2189185.1;Parent=gene-ACYKJH_001074;Dbxref=NCBI_GP:HIH2189185.1;Name=HIH2189185.1;Ontology_term=GO:0000105;gbkey=CDS;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344704.1;locus_tag=ACYKJH_001074;product=HisA/HisF-related TIM barrel protein;protein_id=HIH2189185.1;transl_table=11 DBLQKK010000013.1 tpg gene 49365 49970 . - . ID=gene-ACYKJH_001075;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=ACYKJH_001075 DBLQKK010000013.1 Protein Homology CDS 49365 49970 . - 0 ID=cds-HIH2189186.1;Parent=gene-ACYKJH_001075;Dbxref=NCBI_GP:HIH2189186.1;Name=HIH2189186.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344705.1;locus_tag=ACYKJH_001075;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=HIH2189186.1;transl_table=11 DBLQKK010000013.1 tpg gene 49967 51103 . - . ID=gene-ACYKJH_001076;Name=pseA;gbkey=Gene;gene=pseA;gene_biotype=protein_coding;locus_tag=ACYKJH_001076 DBLQKK010000013.1 Protein Homology CDS 49967 51103 . - 0 ID=cds-HIH2189187.1;Parent=gene-ACYKJH_001076;Dbxref=NCBI_GP:HIH2189187.1;Name=HIH2189187.1;gbkey=CDS;gene=pseA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344706.1;locus_tag=ACYKJH_001076;product=pseudaminic acid biosynthesis protein PseA;protein_id=HIH2189187.1;transl_table=11 ##sequence-region DBLQKK010000014.1 1 48520 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000014.1 tpg region 1 48520 . + . ID=DBLQKK010000014.1:1..48520;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000014.1 tpg gene 42 2408 . - . ID=gene-ACYKJH_001077;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=ACYKJH_001077 DBLQKK010000014.1 Protein Homology CDS 42 2408 . - 0 ID=cds-HIH2189188.1;Parent=gene-ACYKJH_001077;Dbxref=NCBI_GP:HIH2189188.1;Name=HIH2189188.1;gbkey=CDS;gene=pflA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344934.1;locus_tag=ACYKJH_001077;product=DUF7494 domain-containing protein;protein_id=HIH2189188.1;transl_table=11 DBLQKK010000014.1 tpg gene 2430 3818 . - . ID=gene-ACYKJH_001078;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=ACYKJH_001078 DBLQKK010000014.1 Protein Homology CDS 2430 3818 . - 0 ID=cds-HIH2189189.1;Parent=gene-ACYKJH_001078;Dbxref=NCBI_GP:HIH2189189.1;Name=HIH2189189.1;Ontology_term=GO:0008137,GO:0016655,GO:0048038,GO:0050136,GO:0016020;gbkey=CDS;gene=nuoN;go_component=membrane|0016020||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344935.1;locus_tag=ACYKJH_001078;product=NADH-quinone oxidoreductase subunit N;protein_id=HIH2189189.1;transl_table=11 DBLQKK010000014.1 tpg gene 3808 5295 . - . ID=gene-ACYKJH_001079;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=ACYKJH_001079 DBLQKK010000014.1 Protein Homology CDS 3808 5295 . - 0 ID=cds-HIH2189190.1;Parent=gene-ACYKJH_001079;Dbxref=NCBI_GP:HIH2189190.1;Name=HIH2189190.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344936.1;locus_tag=ACYKJH_001079;product=NADH-quinone oxidoreductase subunit M;protein_id=HIH2189190.1;transl_table=11 DBLQKK010000014.1 tpg gene 5297 7087 . - . ID=gene-ACYKJH_001080;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=ACYKJH_001080 DBLQKK010000014.1 Protein Homology CDS 5297 7087 . - 0 ID=cds-HIH2189191.1;Parent=gene-ACYKJH_001080;Dbxref=NCBI_GP:HIH2189191.1;Name=HIH2189191.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344937.1;locus_tag=ACYKJH_001080;product=NADH-quinone oxidoreductase subunit L;protein_id=HIH2189191.1;transl_table=11 DBLQKK010000014.1 tpg gene 7089 7385 . - . ID=gene-ACYKJH_001081;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=ACYKJH_001081 DBLQKK010000014.1 Protein Homology CDS 7089 7385 . - 0 ID=cds-HIH2189192.1;Parent=gene-ACYKJH_001081;Dbxref=NCBI_GP:HIH2189192.1;Name=HIH2189192.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344938.1;locus_tag=ACYKJH_001081;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=HIH2189192.1;transl_table=11 DBLQKK010000014.1 tpg gene 7382 7900 . - . ID=gene-ACYKJH_001082;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=ACYKJH_001082 DBLQKK010000014.1 Protein Homology CDS 7382 7900 . - 0 ID=cds-HIH2189193.1;Parent=gene-ACYKJH_001082;Dbxref=NCBI_GP:HIH2189193.1;Name=HIH2189193.1;gbkey=CDS;gene=nuoJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344939.1;locus_tag=ACYKJH_001082;product=NADH-quinone oxidoreductase subunit J;protein_id=HIH2189193.1;transl_table=11 DBLQKK010000014.1 tpg gene 7897 8538 . - . ID=gene-ACYKJH_001083;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=ACYKJH_001083 DBLQKK010000014.1 Protein Homology CDS 7897 8538 . - 0 ID=cds-HIH2189194.1;Parent=gene-ACYKJH_001083;Dbxref=NCBI_GP:HIH2189194.1;Name=HIH2189194.1;gbkey=CDS;gene=nuoI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344940.1;locus_tag=ACYKJH_001083;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=HIH2189194.1;transl_table=11 DBLQKK010000014.1 tpg gene 8548 9546 . - . ID=gene-ACYKJH_001084;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=ACYKJH_001084 DBLQKK010000014.1 Protein Homology CDS 8548 9546 . - 0 ID=cds-HIH2189195.1;Parent=gene-ACYKJH_001084;Dbxref=NCBI_GP:HIH2189195.1;Name=HIH2189195.1;Ontology_term=GO:0016020;gbkey=CDS;gene=nuoH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344941.1;locus_tag=ACYKJH_001084;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=HIH2189195.1;transl_table=11 DBLQKK010000014.1 tpg gene 9539 12001 . - . ID=gene-ACYKJH_001085;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=ACYKJH_001085 DBLQKK010000014.1 Protein Homology CDS 9539 12001 . - 0 ID=cds-HIH2189196.1;Parent=gene-ACYKJH_001085;Dbxref=NCBI_GP:HIH2189196.1;Name=HIH2189196.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=nuoG;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344942.1;locus_tag=ACYKJH_001085;product=NADH-quinone oxidoreductase subunit G;protein_id=HIH2189196.1;transl_table=11 DBLQKK010000014.1 tpg gene 11998 12690 . - . ID=gene-ACYKJH_001086;Name=ACYKJH_001086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001086 DBLQKK010000014.1 Protein Homology CDS 11998 12690 . - 0 ID=cds-HIH2189197.1;Parent=gene-ACYKJH_001086;Dbxref=NCBI_GP:HIH2189197.1;Name=HIH2189197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344943.1;locus_tag=ACYKJH_001086;product=hypothetical protein;protein_id=HIH2189197.1;transl_table=11 DBLQKK010000014.1 tpg gene 12687 12914 . - . ID=gene-ACYKJH_001087;Name=ACYKJH_001087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001087 DBLQKK010000014.1 Protein Homology CDS 12687 12914 . - 0 ID=cds-HIH2189198.1;Parent=gene-ACYKJH_001087;Dbxref=NCBI_GP:HIH2189198.1;Name=HIH2189198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344944.1;locus_tag=ACYKJH_001087;product=NADH-ubiquinone oxidoreductase subunit E family protein;protein_id=HIH2189198.1;transl_table=11 DBLQKK010000014.1 tpg gene 12911 14137 . - . ID=gene-ACYKJH_001088;Name=nuoD;gbkey=Gene;gene=nuoD;gene_biotype=protein_coding;locus_tag=ACYKJH_001088 DBLQKK010000014.1 Protein Homology CDS 12911 14137 . - 0 ID=cds-HIH2189199.1;Parent=gene-ACYKJH_001088;Dbxref=NCBI_GP:HIH2189199.1;Name=HIH2189199.1;Ontology_term=GO:0050136;gbkey=CDS;gene=nuoD;go_function=NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344945.1;locus_tag=ACYKJH_001088;product=NADH dehydrogenase (quinone) subunit D;protein_id=HIH2189199.1;transl_table=11 DBLQKK010000014.1 tpg gene 14139 14933 . - . ID=gene-ACYKJH_001089;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=ACYKJH_001089 DBLQKK010000014.1 Protein Homology CDS 14139 14933 . - 0 ID=cds-HIH2189200.1;Parent=gene-ACYKJH_001089;Dbxref=NCBI_GP:HIH2189200.1;Name=HIH2189200.1;gbkey=CDS;gene=nuoC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344946.1;locus_tag=ACYKJH_001089;product=NADH-quinone oxidoreductase subunit C;protein_id=HIH2189200.1;transl_table=11 DBLQKK010000014.1 tpg gene 14930 15433 . - . ID=gene-ACYKJH_001090;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=ACYKJH_001090 DBLQKK010000014.1 Protein Homology CDS 14930 15433 . - 0 ID=cds-HIH2189201.1;Parent=gene-ACYKJH_001090;Dbxref=NCBI_GP:HIH2189201.1;Name=HIH2189201.1;Ontology_term=GO:0008137,GO:0016655,GO:0048038,GO:0051539,GO:0005886,GO:0045271;gbkey=CDS;gene=nuoB;go_component=plasma membrane|0005886||IEA,respiratory chain complex I|0045271||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344947.1;locus_tag=ACYKJH_001090;product=NuoB/complex I 20 kDa subunit family protein;protein_id=HIH2189201.1;transl_table=11 DBLQKK010000014.1 tpg gene 15415 15804 . - . ID=gene-ACYKJH_001091;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=ACYKJH_001091 DBLQKK010000014.1 Protein Homology CDS 15415 15804 . - 0 ID=cds-HIH2189202.1;Parent=gene-ACYKJH_001091;Dbxref=NCBI_GP:HIH2189202.1;Name=HIH2189202.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344948.1;locus_tag=ACYKJH_001091;product=NAD(P)H-quinone oxidoreductase subunit 3;protein_id=HIH2189202.1;transl_table=11 DBLQKK010000014.1 tpg gene 15916 16581 . - . ID=gene-ACYKJH_001092;Name=ACYKJH_001092;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001092 DBLQKK010000014.1 Protein Homology CDS 15916 16581 . - 0 ID=cds-HIH2189203.1;Parent=gene-ACYKJH_001092;Dbxref=NCBI_GP:HIH2189203.1;Name=HIH2189203.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344949.1;locus_tag=ACYKJH_001092;product=ATP-binding cassette domain-containing protein;protein_id=HIH2189203.1;transl_table=11 DBLQKK010000014.1 tpg gene 16574 17284 . - . ID=gene-ACYKJH_001093;Name=ACYKJH_001093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001093 DBLQKK010000014.1 Protein Homology CDS 16574 17284 . - 0 ID=cds-HIH2189204.1;Parent=gene-ACYKJH_001093;Dbxref=NCBI_GP:HIH2189204.1;Name=HIH2189204.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344950.1;locus_tag=ACYKJH_001093;product=ATP-binding cassette domain-containing protein;protein_id=HIH2189204.1;transl_table=11 DBLQKK010000014.1 tpg gene 17281 18075 . - . ID=gene-ACYKJH_001094;Name=ACYKJH_001094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001094 DBLQKK010000014.1 Protein Homology CDS 17281 18075 . - 0 ID=cds-HIH2189205.1;Parent=gene-ACYKJH_001094;Dbxref=NCBI_GP:HIH2189205.1;Name=HIH2189205.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344951.1;locus_tag=ACYKJH_001094;product=ABC transporter permease;protein_id=HIH2189205.1;transl_table=11 DBLQKK010000014.1 tpg gene 18062 19006 . - . ID=gene-ACYKJH_001095;Name=ACYKJH_001095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001095 DBLQKK010000014.1 Protein Homology CDS 18062 19006 . - 0 ID=cds-HIH2189206.1;Parent=gene-ACYKJH_001095;Dbxref=NCBI_GP:HIH2189206.1;Name=HIH2189206.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344952.1;locus_tag=ACYKJH_001095;product=ABC transporter permease;protein_id=HIH2189206.1;transl_table=11 DBLQKK010000014.1 tpg gene 19006 20541 . - . ID=gene-ACYKJH_001096;Name=ACYKJH_001096;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001096 DBLQKK010000014.1 Protein Homology CDS 19006 20541 . - 0 ID=cds-HIH2189207.1;Parent=gene-ACYKJH_001096;Dbxref=NCBI_GP:HIH2189207.1;Name=HIH2189207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344953.1;locus_tag=ACYKJH_001096;product=ABC transporter substrate-binding protein;protein_id=HIH2189207.1;transl_table=11 DBLQKK010000014.1 tpg gene 20651 23422 . - . ID=gene-ACYKJH_001097;Name=ACYKJH_001097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001097 DBLQKK010000014.1 Protein Homology CDS 20651 23422 . - 0 ID=cds-HIH2189208.1;Parent=gene-ACYKJH_001097;Dbxref=NCBI_GP:HIH2189208.1;Name=HIH2189208.1;Ontology_term=GO:0016491,GO:0046872,GO:0050660,GO:0051536,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,flavin adenine dinucleotide binding|0050660||IEA,iron-sulfur cluster binding|0051536||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344954.1;locus_tag=ACYKJH_001097;product=FAD-binding and (Fe-S)-binding domain-containing protein;protein_id=HIH2189208.1;transl_table=11 DBLQKK010000014.1 tpg gene 23575 23997 . + . ID=gene-ACYKJH_001098;Name=cgb;gbkey=Gene;gene=cgb;gene_biotype=protein_coding;locus_tag=ACYKJH_001098 DBLQKK010000014.1 Protein Homology CDS 23575 23997 . + 0 ID=cds-HIH2189209.1;Parent=gene-ACYKJH_001098;Dbxref=NCBI_GP:HIH2189209.1;Name=HIH2189209.1;gbkey=CDS;gene=cgb;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344955.1;locus_tag=ACYKJH_001098;product=single-domain globin Cgb;protein_id=HIH2189209.1;transl_table=11 DBLQKK010000014.1 tpg gene 24017 25648 . - . ID=gene-ACYKJH_001099;Name=ACYKJH_001099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001099 DBLQKK010000014.1 Protein Homology CDS 24017 25648 . - 0 ID=cds-HIH2189210.1;Parent=gene-ACYKJH_001099;Dbxref=NCBI_GP:HIH2189210.1;Name=HIH2189210.1;Ontology_term=GO:0015833,GO:0140359,GO:1904680;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344956.1;locus_tag=ACYKJH_001099;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=HIH2189210.1;transl_table=11 DBLQKK010000014.1 tpg gene 25698 26993 . - . ID=gene-ACYKJH_001100;Name=ACYKJH_001100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001100 DBLQKK010000014.1 Protein Homology CDS 25698 26993 . - 0 ID=cds-HIH2189211.1;Parent=gene-ACYKJH_001100;Dbxref=NCBI_GP:HIH2189211.1;Name=HIH2189211.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344957.1;locus_tag=ACYKJH_001100;product=MFS transporter;protein_id=HIH2189211.1;transl_table=11 DBLQKK010000014.1 tpg pseudogene 27081 27877 . + . ID=gene-ACYKJH_001101;Name=ACYKJH_001101;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001101;pseudo=true DBLQKK010000014.1 Protein Homology CDS 27081 27877 . + 0 ID=cds-ACYKJH_001101;Parent=gene-ACYKJH_001101;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344958.1;locus_tag=ACYKJH_001101;product=MBL fold metallo-hydrolase;pseudo=true;transl_table=11 DBLQKK010000014.1 tpg gene 27965 28183 . + . ID=gene-ACYKJH_001102;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=ACYKJH_001102 DBLQKK010000014.1 Protein Homology CDS 27965 28183 . + 0 ID=cds-HIH2189212.1;Parent=gene-ACYKJH_001102;Dbxref=NCBI_GP:HIH2189212.1;Name=HIH2189212.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344959.1;locus_tag=ACYKJH_001102;product=translation initiation factor IF-1;protein_id=HIH2189212.1;transl_table=11 DBLQKK010000014.1 tpg gene 28355 28468 . + . ID=gene-ACYKJH_001103;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=ACYKJH_001103 DBLQKK010000014.1 Protein Homology CDS 28355 28468 . + 0 ID=cds-HIH2189213.1;Parent=gene-ACYKJH_001103;Dbxref=NCBI_GP:HIH2189213.1;Name=HIH2189213.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015896560.1;locus_tag=ACYKJH_001103;product=50S ribosomal protein L36;protein_id=HIH2189213.1;transl_table=11 DBLQKK010000014.1 tpg gene 28471 28836 . + . ID=gene-ACYKJH_001104;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=ACYKJH_001104 DBLQKK010000014.1 Protein Homology CDS 28471 28836 . + 0 ID=cds-HIH2189214.1;Parent=gene-ACYKJH_001104;Dbxref=NCBI_GP:HIH2189214.1;Name=HIH2189214.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344961.1;locus_tag=ACYKJH_001104;product=30S ribosomal protein S13;protein_id=HIH2189214.1;transl_table=11 DBLQKK010000014.1 tpg gene 28846 29238 . + . ID=gene-ACYKJH_001105;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=ACYKJH_001105 DBLQKK010000014.1 Protein Homology CDS 28846 29238 . + 0 ID=cds-HIH2189215.1;Parent=gene-ACYKJH_001105;Dbxref=NCBI_GP:HIH2189215.1;Name=HIH2189215.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344962.1;locus_tag=ACYKJH_001105;product=30S ribosomal protein S11;protein_id=HIH2189215.1;transl_table=11 DBLQKK010000014.1 tpg gene 29266 29892 . + . ID=gene-ACYKJH_001106;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=ACYKJH_001106 DBLQKK010000014.1 Protein Homology CDS 29266 29892 . + 0 ID=cds-HIH2189216.1;Parent=gene-ACYKJH_001106;Dbxref=NCBI_GP:HIH2189216.1;Name=HIH2189216.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002856574.1;locus_tag=ACYKJH_001106;product=30S ribosomal protein S4;protein_id=HIH2189216.1;transl_table=11 DBLQKK010000014.1 tpg gene 29905 30918 . + . ID=gene-ACYKJH_001107;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=ACYKJH_001107 DBLQKK010000014.1 Protein Homology CDS 29905 30918 . + 0 ID=cds-HIH2189217.1;Parent=gene-ACYKJH_001107;Dbxref=NCBI_GP:HIH2189217.1;Name=HIH2189217.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoA;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344964.1;locus_tag=ACYKJH_001107;product=DNA-directed RNA polymerase subunit alpha;protein_id=HIH2189217.1;transl_table=11 DBLQKK010000014.1 tpg gene 30922 31275 . + . ID=gene-ACYKJH_001108;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=ACYKJH_001108 DBLQKK010000014.1 Protein Homology CDS 30922 31275 . + 0 ID=cds-HIH2189218.1;Parent=gene-ACYKJH_001108;Dbxref=NCBI_GP:HIH2189218.1;Name=HIH2189218.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344965.1;locus_tag=ACYKJH_001108;product=50S ribosomal protein L17;protein_id=HIH2189218.1;transl_table=11 DBLQKK010000014.1 tpg gene 31448 32347 . + . ID=gene-ACYKJH_001109;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=ACYKJH_001109 DBLQKK010000014.1 Protein Homology CDS 31448 32347 . + 0 ID=cds-HIH2189219.1;Parent=gene-ACYKJH_001109;Dbxref=NCBI_GP:HIH2189219.1;Name=HIH2189219.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344966.1;locus_tag=ACYKJH_001109;product=ATP phosphoribosyltransferase;protein_id=HIH2189219.1;transl_table=11 DBLQKK010000014.1 tpg gene 32355 33641 . + . ID=gene-ACYKJH_001110;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=ACYKJH_001110 DBLQKK010000014.1 Protein Homology CDS 32355 33641 . + 0 ID=cds-HIH2189220.1;Parent=gene-ACYKJH_001110;Dbxref=NCBI_GP:HIH2189220.1;Name=HIH2189220.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344967.1;locus_tag=ACYKJH_001110;product=histidinol dehydrogenase;protein_id=HIH2189220.1;transl_table=11 DBLQKK010000014.1 tpg gene 33638 34696 . + . ID=gene-ACYKJH_001111;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=ACYKJH_001111 DBLQKK010000014.1 Protein Homology CDS 33638 34696 . + 0 ID=cds-HIH2189221.1;Parent=gene-ACYKJH_001111;Dbxref=NCBI_GP:HIH2189221.1;Name=HIH2189221.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344968.1;locus_tag=ACYKJH_001111;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=HIH2189221.1;transl_table=11 DBLQKK010000014.1 tpg gene 34693 35763 . + . ID=gene-ACYKJH_001112;Name=ACYKJH_001112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001112 DBLQKK010000014.1 Protein Homology CDS 34693 35763 . + 0 ID=cds-HIH2189222.1;Parent=gene-ACYKJH_001112;Dbxref=NCBI_GP:HIH2189222.1;Name=HIH2189222.1;Ontology_term=GO:0006304,GO:0003677,GO:0003886,GO:0008168,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA (cytosine-5-)-methyltransferase activity|0003886||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002888510.1;locus_tag=ACYKJH_001112;product=DNA cytosine methyltransferase;protein_id=HIH2189222.1;transl_table=11 DBLQKK010000014.1 tpg gene 35753 36502 . + . ID=gene-ACYKJH_001113;Name=ACYKJH_001113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001113 DBLQKK010000014.1 Protein Homology CDS 35753 36502 . + 0 ID=cds-HIH2189223.1;Parent=gene-ACYKJH_001113;Dbxref=NCBI_GP:HIH2189223.1;Name=HIH2189223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002888511.1;locus_tag=ACYKJH_001113;product=restriction endonuclease;protein_id=HIH2189223.1;transl_table=11 DBLQKK010000014.1 tpg gene 36499 37086 . + . ID=gene-ACYKJH_001114;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=ACYKJH_001114 DBLQKK010000014.1 Protein Homology CDS 36499 37086 . + 0 ID=cds-HIH2189224.1;Parent=gene-ACYKJH_001114;Dbxref=NCBI_GP:HIH2189224.1;Name=HIH2189224.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344969.1;locus_tag=ACYKJH_001114;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=HIH2189224.1;transl_table=11 DBLQKK010000014.1 tpg gene 37083 37814 . + . ID=gene-ACYKJH_001115;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=ACYKJH_001115 DBLQKK010000014.1 Protein Homology CDS 37083 37814 . + 0 ID=cds-HIH2189225.1;Parent=gene-ACYKJH_001115;Dbxref=NCBI_GP:HIH2189225.1;Name=HIH2189225.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344970.1;locus_tag=ACYKJH_001115;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=HIH2189225.1;transl_table=11 DBLQKK010000014.1 tpg gene 37799 38755 . + . ID=gene-ACYKJH_001116;Name=ACYKJH_001116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001116 DBLQKK010000014.1 Protein Homology CDS 37799 38755 . + 0 ID=cds-HIH2189226.1;Parent=gene-ACYKJH_001116;Dbxref=NCBI_GP:HIH2189226.1;Name=HIH2189226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344971.1;locus_tag=ACYKJH_001116;product=COG2958 family protein;protein_id=HIH2189226.1;transl_table=11 DBLQKK010000014.1 tpg gene 38756 39523 . + . ID=gene-ACYKJH_001117;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=ACYKJH_001117 DBLQKK010000014.1 Protein Homology CDS 38756 39523 . + 0 ID=cds-HIH2189227.1;Parent=gene-ACYKJH_001117;Dbxref=NCBI_GP:HIH2189227.1;Name=HIH2189227.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344972.1;locus_tag=ACYKJH_001117;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=HIH2189227.1;transl_table=11 DBLQKK010000014.1 tpg gene 39525 40148 . + . ID=gene-ACYKJH_001118;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=ACYKJH_001118 DBLQKK010000014.1 Protein Homology CDS 39525 40148 . + 0 ID=cds-HIH2189228.1;Parent=gene-ACYKJH_001118;Dbxref=NCBI_GP:HIH2189228.1;Name=HIH2189228.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344973.1;locus_tag=ACYKJH_001118;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=HIH2189228.1;transl_table=11 DBLQKK010000014.1 tpg gene 40173 41333 . - . ID=gene-ACYKJH_001119;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=ACYKJH_001119 DBLQKK010000014.1 Protein Homology CDS 40173 41333 . - 0 ID=cds-HIH2189229.1;Parent=gene-ACYKJH_001119;Dbxref=NCBI_GP:HIH2189229.1;Name=HIH2189229.1;gbkey=CDS;gene=dapD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344974.1;locus_tag=ACYKJH_001119;product=tetrahydrodipicolinate N-succinyltransferase N-terminal domain-containing protein;protein_id=HIH2189229.1;transl_table=11 DBLQKK010000014.1 tpg gene 41359 42465 . - . ID=gene-ACYKJH_001120;Name=mrp;gbkey=Gene;gene=mrp;gene_biotype=protein_coding;locus_tag=ACYKJH_001120 DBLQKK010000014.1 Protein Homology CDS 41359 42465 . - 0 ID=cds-HIH2189230.1;Parent=gene-ACYKJH_001120;Dbxref=NCBI_GP:HIH2189230.1;Name=HIH2189230.1;Ontology_term=GO:0005524,GO:0016887,GO:0046872,GO:0051536,GO:0140663;gbkey=CDS;gene=mrp;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,ATP-dependent FeS chaperone activity|0140663||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344975.1;locus_tag=ACYKJH_001120;product=Mrp/NBP35 family ATP-binding protein;protein_id=HIH2189230.1;transl_table=11 DBLQKK010000014.1 tpg gene 42588 43703 . + . ID=gene-ACYKJH_001121;Name=ispDF;gbkey=Gene;gene=ispDF;gene_biotype=protein_coding;locus_tag=ACYKJH_001121 DBLQKK010000014.1 Protein Homology CDS 42588 43703 . + 0 ID=cds-HIH2189231.1;Parent=gene-ACYKJH_001121;Dbxref=NCBI_GP:HIH2189231.1;Name=HIH2189231.1;Ontology_term=GO:0008299,GO:0016114,GO:0008685,GO:0050518;gbkey=CDS;gene=ispDF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA,2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344976.1;locus_tag=ACYKJH_001121;product=bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=HIH2189231.1;transl_table=11 DBLQKK010000014.1 tpg gene 43700 44587 . + . ID=gene-ACYKJH_001122;Name=ACYKJH_001122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001122 DBLQKK010000014.1 Protein Homology CDS 43700 44587 . + 0 ID=cds-HIH2189232.1;Parent=gene-ACYKJH_001122;Dbxref=NCBI_GP:HIH2189232.1;Name=HIH2189232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344977.1;locus_tag=ACYKJH_001122;product=response regulator;protein_id=HIH2189232.1;transl_table=11 DBLQKK010000014.1 tpg gene 44565 45725 . + . ID=gene-ACYKJH_001123;Name=ACYKJH_001123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001123 DBLQKK010000014.1 Protein Homology CDS 44565 45725 . + 0 ID=cds-HIH2189233.1;Parent=gene-ACYKJH_001123;Dbxref=NCBI_GP:HIH2189233.1;Name=HIH2189233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344978.1;locus_tag=ACYKJH_001123;product=sulfate adenylyltransferase;protein_id=HIH2189233.1;transl_table=11 DBLQKK010000014.1 tpg gene 45730 46230 . + . ID=gene-ACYKJH_001124;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=ACYKJH_001124 DBLQKK010000014.1 Protein Homology CDS 45730 46230 . + 0 ID=cds-HIH2189234.1;Parent=gene-ACYKJH_001124;Dbxref=NCBI_GP:HIH2189234.1;Name=HIH2189234.1;Ontology_term=GO:0006644,GO:0042578,GO:0046872;gbkey=CDS;gene=pgpA;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=phospholipid metabolic process|0006644||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344979.1;locus_tag=ACYKJH_001124;product=phosphatidylglycerophosphatase A family protein;protein_id=HIH2189234.1;transl_table=11 DBLQKK010000014.1 tpg gene 46309 46572 . + . ID=gene-ACYKJH_001125;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=ACYKJH_001125 DBLQKK010000014.1 Protein Homology CDS 46309 46572 . + 0 ID=cds-HIH2189235.1;Parent=gene-ACYKJH_001125;Dbxref=NCBI_GP:HIH2189235.1;Name=HIH2189235.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344980.1;locus_tag=ACYKJH_001125;product=30S ribosomal protein S20;protein_id=HIH2189235.1;transl_table=11 DBLQKK010000014.1 tpg gene 46591 47658 . + . ID=gene-ACYKJH_001126;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=ACYKJH_001126 DBLQKK010000014.1 Protein Homology CDS 46591 47658 . + 0 ID=cds-HIH2189236.1;Parent=gene-ACYKJH_001126;Dbxref=NCBI_GP:HIH2189236.1;Name=HIH2189236.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344981.1;locus_tag=ACYKJH_001126;product=peptide chain release factor 1;protein_id=HIH2189236.1;transl_table=11 DBLQKK010000014.1 tpg gene 47672 48427 . - . ID=gene-ACYKJH_001127;Name=ACYKJH_001127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001127 DBLQKK010000014.1 Protein Homology CDS 47672 48427 . - 0 ID=cds-HIH2189237.1;Parent=gene-ACYKJH_001127;Dbxref=NCBI_GP:HIH2189237.1;Name=HIH2189237.1;Ontology_term=GO:0042167,GO:0004392;gbkey=CDS;go_function=heme oxygenase (decyclizing) activity|0004392||IEA;go_process=heme catabolic process|0042167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344982.1;locus_tag=ACYKJH_001127;product=HugZ family heme oxygenase;protein_id=HIH2189237.1;transl_table=11 ##sequence-region DBLQKK010000015.1 1 44942 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000015.1 tpg region 1 44942 . + . ID=DBLQKK010000015.1:1..44942;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000015.1 tpg gene 138 1544 . + . ID=gene-ACYKJH_001128;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=ACYKJH_001128 DBLQKK010000015.1 Protein Homology CDS 138 1544 . + 0 ID=cds-HIH2189238.1;Parent=gene-ACYKJH_001128;Dbxref=NCBI_GP:HIH2189238.1;Name=HIH2189238.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343547.1;locus_tag=ACYKJH_001128;product=aspartate ammonia-lyase;protein_id=HIH2189238.1;transl_table=11 DBLQKK010000015.1 tpg gene 1560 2897 . + . ID=gene-ACYKJH_001129;Name=ACYKJH_001129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001129 DBLQKK010000015.1 Protein Homology CDS 1560 2897 . + 0 ID=cds-HIH2189239.1;Parent=gene-ACYKJH_001129;Dbxref=NCBI_GP:HIH2189239.1;Name=HIH2189239.1;Ontology_term=GO:0015740,GO:0015556,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343548.1;locus_tag=ACYKJH_001129;product=anaerobic C4-dicarboxylate transporter;protein_id=HIH2189239.1;transl_table=11 DBLQKK010000015.1 tpg gene 3005 4366 . + . ID=gene-ACYKJH_001130;Name=ACYKJH_001130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001130 DBLQKK010000015.1 Protein Homology CDS 3005 4366 . + 0 ID=cds-HIH2189240.1;Parent=gene-ACYKJH_001130;Dbxref=NCBI_GP:HIH2189240.1;Name=HIH2189240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343549.1;locus_tag=ACYKJH_001130;product=hypothetical protein;protein_id=HIH2189240.1;transl_table=11 DBLQKK010000015.1 tpg gene 4376 4744 . + . ID=gene-ACYKJH_001131;Name=ACYKJH_001131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001131 DBLQKK010000015.1 Protein Homology CDS 4376 4744 . + 0 ID=cds-HIH2189241.1;Parent=gene-ACYKJH_001131;Dbxref=NCBI_GP:HIH2189241.1;Name=HIH2189241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343550.1;locus_tag=ACYKJH_001131;product=DUF1425 domain-containing protein;protein_id=HIH2189241.1;transl_table=11 DBLQKK010000015.1 tpg gene 4768 5391 . + . ID=gene-ACYKJH_001132;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=ACYKJH_001132 DBLQKK010000015.1 Protein Homology CDS 4768 5391 . + 0 ID=cds-HIH2189242.1;Parent=gene-ACYKJH_001132;Dbxref=NCBI_GP:HIH2189242.1;Name=HIH2189242.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343551.1;locus_tag=ACYKJH_001132;product=penicillin-binding protein activator LpoB;protein_id=HIH2189242.1;transl_table=11 DBLQKK010000015.1 tpg gene 5474 6811 . + . ID=gene-ACYKJH_001133;Name=ACYKJH_001133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001133 DBLQKK010000015.1 Protein Homology CDS 5474 6811 . + 0 ID=cds-HIH2189243.1;Parent=gene-ACYKJH_001133;Dbxref=NCBI_GP:HIH2189243.1;Name=HIH2189243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343552.1;locus_tag=ACYKJH_001133;product=DUF6844 domain-containing protein;protein_id=HIH2189243.1;transl_table=11 DBLQKK010000015.1 tpg gene 6821 8023 . + . ID=gene-ACYKJH_001134;Name=ACYKJH_001134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001134 DBLQKK010000015.1 Protein Homology CDS 6821 8023 . + 0 ID=cds-HIH2189244.1;Parent=gene-ACYKJH_001134;Dbxref=NCBI_GP:HIH2189244.1;Name=HIH2189244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343553.1;locus_tag=ACYKJH_001134;product=CsgG/HfaB family protein;protein_id=HIH2189244.1;transl_table=11 DBLQKK010000015.1 tpg gene 8182 8490 . + . ID=gene-ACYKJH_001135;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=ACYKJH_001135 DBLQKK010000015.1 Protein Homology CDS 8182 8490 . + 0 ID=cds-HIH2189245.1;Parent=gene-ACYKJH_001135;Dbxref=NCBI_GP:HIH2189245.1;Name=HIH2189245.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343554.1;locus_tag=ACYKJH_001135;product=50S ribosomal protein L21;protein_id=HIH2189245.1;transl_table=11 DBLQKK010000015.1 tpg gene 8501 8755 . + . ID=gene-ACYKJH_001136;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=ACYKJH_001136 DBLQKK010000015.1 Protein Homology CDS 8501 8755 . + 0 ID=cds-HIH2189246.1;Parent=gene-ACYKJH_001136;Dbxref=NCBI_GP:HIH2189246.1;Name=HIH2189246.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343555.1;locus_tag=ACYKJH_001136;product=50S ribosomal protein L27;protein_id=HIH2189246.1;transl_table=11 DBLQKK010000015.1 tpg gene 8862 9899 . + . ID=gene-ACYKJH_001137;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=ACYKJH_001137 DBLQKK010000015.1 Protein Homology CDS 8862 9899 . + 0 ID=cds-HIH2189247.1;Parent=gene-ACYKJH_001137;Dbxref=NCBI_GP:HIH2189247.1;Name=HIH2189247.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=obgE;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002872259.1;locus_tag=ACYKJH_001137;product=GTPase ObgE;protein_id=HIH2189247.1;transl_table=11 DBLQKK010000015.1 tpg gene 10022 10777 . + . ID=gene-ACYKJH_001138;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=ACYKJH_001138 DBLQKK010000015.1 Protein Homology CDS 10022 10777 . + 0 ID=cds-HIH2189248.1;Parent=gene-ACYKJH_001138;Dbxref=NCBI_GP:HIH2189248.1;Name=HIH2189248.1;Ontology_term=GO:0006561,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343557.1;locus_tag=ACYKJH_001138;product=glutamate 5-kinase;protein_id=HIH2189248.1;transl_table=11 DBLQKK010000015.1 tpg gene 10851 11768 . + . ID=gene-ACYKJH_001139;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=ACYKJH_001139 DBLQKK010000015.1 Protein Homology CDS 10851 11768 . + 0 ID=cds-HIH2189249.1;Parent=gene-ACYKJH_001139;Dbxref=NCBI_GP:HIH2189249.1;Name=HIH2189249.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343558.1;locus_tag=ACYKJH_001139;product=methionyl-tRNA formyltransferase;protein_id=HIH2189249.1;transl_table=11 DBLQKK010000015.1 tpg gene 11731 12384 . + . ID=gene-ACYKJH_001140;Name=ACYKJH_001140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001140 DBLQKK010000015.1 Protein Homology CDS 11731 12384 . + 0 ID=cds-HIH2189250.1;Parent=gene-ACYKJH_001140;Dbxref=NCBI_GP:HIH2189250.1;Name=HIH2189250.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343559.1;locus_tag=ACYKJH_001140;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=HIH2189250.1;transl_table=11 DBLQKK010000015.1 tpg gene 12381 13166 . + . ID=gene-ACYKJH_001141;Name=ACYKJH_001141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001141 DBLQKK010000015.1 Protein Homology CDS 12381 13166 . + 0 ID=cds-HIH2189251.1;Parent=gene-ACYKJH_001141;Dbxref=NCBI_GP:HIH2189251.1;Name=HIH2189251.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004278029.1;locus_tag=ACYKJH_001141;product=ParA family protein;protein_id=HIH2189251.1;transl_table=11 DBLQKK010000015.1 tpg gene 13172 14008 . + . ID=gene-ACYKJH_001142;Name=ACYKJH_001142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001142 DBLQKK010000015.1 Protein Homology CDS 13172 14008 . + 0 ID=cds-HIH2189252.1;Parent=gene-ACYKJH_001142;Dbxref=NCBI_GP:HIH2189252.1;Name=HIH2189252.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812158.1;locus_tag=ACYKJH_001142;product=ParB/RepB/Spo0J family partition protein;protein_id=HIH2189252.1;transl_table=11 DBLQKK010000015.1 tpg gene 14069 14494 . + . ID=gene-ACYKJH_001143;Name=ACYKJH_001143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001143 DBLQKK010000015.1 Protein Homology CDS 14069 14494 . + 0 ID=cds-HIH2189253.1;Parent=gene-ACYKJH_001143;Dbxref=NCBI_GP:HIH2189253.1;Name=HIH2189253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343562.1;locus_tag=ACYKJH_001143;product=FoF1 ATP synthase subunit B';protein_id=HIH2189253.1;transl_table=11 DBLQKK010000015.1 tpg gene 14505 15017 . + . ID=gene-ACYKJH_001144;Name=ACYKJH_001144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001144 DBLQKK010000015.1 Protein Homology CDS 14505 15017 . + 0 ID=cds-HIH2189254.1;Parent=gene-ACYKJH_001144;Dbxref=NCBI_GP:HIH2189254.1;Name=HIH2189254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343563.1;locus_tag=ACYKJH_001144;product=F0F1 ATP synthase subunit B;protein_id=HIH2189254.1;transl_table=11 DBLQKK010000015.1 tpg gene 15020 15541 . + . ID=gene-ACYKJH_001145;Name=ACYKJH_001145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001145 DBLQKK010000015.1 Protein Homology CDS 15020 15541 . + 0 ID=cds-HIH2189255.1;Parent=gene-ACYKJH_001145;Dbxref=NCBI_GP:HIH2189255.1;Name=HIH2189255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343564.1;locus_tag=ACYKJH_001145;product=F0F1 ATP synthase subunit delta;protein_id=HIH2189255.1;transl_table=11 DBLQKK010000015.1 tpg gene 15555 17060 . + . ID=gene-ACYKJH_001146;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=ACYKJH_001146 DBLQKK010000015.1 Protein Homology CDS 15555 17060 . + 0 ID=cds-HIH2189256.1;Parent=gene-ACYKJH_001146;Dbxref=NCBI_GP:HIH2189256.1;Name=HIH2189256.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343565.1;locus_tag=ACYKJH_001146;product=F0F1 ATP synthase subunit alpha;protein_id=HIH2189256.1;transl_table=11 DBLQKK010000015.1 tpg gene 17069 17953 . + . ID=gene-ACYKJH_001147;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=ACYKJH_001147 DBLQKK010000015.1 Protein Homology CDS 17069 17953 . + 0 ID=cds-HIH2189257.1;Parent=gene-ACYKJH_001147;Dbxref=NCBI_GP:HIH2189257.1;Name=HIH2189257.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343566.1;locus_tag=ACYKJH_001147;product=ATP synthase F1 subunit gamma;protein_id=HIH2189257.1;transl_table=11 DBLQKK010000015.1 tpg gene 17978 19375 . + . ID=gene-ACYKJH_001148;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=ACYKJH_001148 DBLQKK010000015.1 Protein Homology CDS 17978 19375 . + 0 ID=cds-HIH2189258.1;Parent=gene-ACYKJH_001148;Dbxref=NCBI_GP:HIH2189258.1;Name=HIH2189258.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343567.1;locus_tag=ACYKJH_001148;product=F0F1 ATP synthase subunit beta;protein_id=HIH2189258.1;transl_table=11 DBLQKK010000015.1 tpg gene 19379 19768 . + . ID=gene-ACYKJH_001149;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=ACYKJH_001149 DBLQKK010000015.1 Protein Homology CDS 19379 19768 . + 0 ID=cds-HIH2189259.1;Parent=gene-ACYKJH_001149;Dbxref=NCBI_GP:HIH2189259.1;Name=HIH2189259.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpC;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343568.1;locus_tag=ACYKJH_001149;product=ATP synthase F1 subunit epsilon;protein_id=HIH2189259.1;transl_table=11 DBLQKK010000015.1 tpg gene 19768 20322 . + . ID=gene-ACYKJH_001150;Name=ACYKJH_001150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001150 DBLQKK010000015.1 Protein Homology CDS 19768 20322 . + 0 ID=cds-HIH2189260.1;Parent=gene-ACYKJH_001150;Dbxref=NCBI_GP:HIH2189260.1;Name=HIH2189260.1;Ontology_term=GO:0015031,GO:0015252,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=proton channel activity|0015252||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343569.1;locus_tag=ACYKJH_001150;product=MotA/TolQ/ExbB proton channel family protein;protein_id=HIH2189260.1;transl_table=11 DBLQKK010000015.1 tpg gene 20331 20720 . + . ID=gene-ACYKJH_001151;Name=ACYKJH_001151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001151 DBLQKK010000015.1 Protein Homology CDS 20331 20720 . + 0 ID=cds-HIH2189261.1;Parent=gene-ACYKJH_001151;Dbxref=NCBI_GP:HIH2189261.1;Name=HIH2189261.1;Ontology_term=GO:0015031,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343570.1;locus_tag=ACYKJH_001151;product=ExbD/TolR family protein;protein_id=HIH2189261.1;transl_table=11 DBLQKK010000015.1 tpg gene 20723 21502 . + . ID=gene-ACYKJH_001152;Name=ACYKJH_001152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001152 DBLQKK010000015.1 Protein Homology CDS 20723 21502 . + 0 ID=cds-HIH2189262.1;Parent=gene-ACYKJH_001152;Dbxref=NCBI_GP:HIH2189262.1;Name=HIH2189262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343571.1;locus_tag=ACYKJH_001152;product=TonB C-terminal domain-containing protein;protein_id=HIH2189262.1;transl_table=11 DBLQKK010000015.1 tpg gene 21512 22720 . + . ID=gene-ACYKJH_001153;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=ACYKJH_001153 DBLQKK010000015.1 Protein Homology CDS 21512 22720 . + 0 ID=cds-HIH2189263.1;Parent=gene-ACYKJH_001153;Dbxref=NCBI_GP:HIH2189263.1;Name=HIH2189263.1;gbkey=CDS;gene=tolB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343572.1;locus_tag=ACYKJH_001153;product=Tol-Pal system protein TolB;protein_id=HIH2189263.1;transl_table=11 DBLQKK010000015.1 tpg gene 22797 23294 . + . ID=gene-ACYKJH_001154;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=ACYKJH_001154 DBLQKK010000015.1 Protein Homology CDS 22797 23294 . + 0 ID=cds-HIH2189264.1;Parent=gene-ACYKJH_001154;Dbxref=NCBI_GP:HIH2189264.1;Name=HIH2189264.1;Ontology_term=GO:0009279;gbkey=CDS;gene=pal;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343573.1;locus_tag=ACYKJH_001154;product=peptidoglycan-associated lipoprotein Pal;protein_id=HIH2189264.1;transl_table=11 DBLQKK010000015.1 tpg gene 23298 24245 . + . ID=gene-ACYKJH_001155;Name=ACYKJH_001155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001155 DBLQKK010000015.1 Protein Homology CDS 23298 24245 . + 0 ID=cds-HIH2189265.1;Parent=gene-ACYKJH_001155;Dbxref=NCBI_GP:HIH2189265.1;Name=HIH2189265.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343574.1;locus_tag=ACYKJH_001155;product=tetratricopeptide repeat protein;protein_id=HIH2189265.1;transl_table=11 DBLQKK010000015.1 tpg gene 24260 24829 . + . ID=gene-ACYKJH_001156;Name=ACYKJH_001156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001156 DBLQKK010000015.1 Protein Homology CDS 24260 24829 . + 0 ID=cds-HIH2189266.1;Parent=gene-ACYKJH_001156;Dbxref=NCBI_GP:HIH2189266.1;Name=HIH2189266.1;Ontology_term=GO:0006457,GO:0003755,GO:0046872;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,metal ion binding|0046872||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343575.1;locus_tag=ACYKJH_001156;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=HIH2189266.1;transl_table=11 DBLQKK010000015.1 tpg gene 24877 25749 . + . ID=gene-ACYKJH_001157;Name=ACYKJH_001157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001157 DBLQKK010000015.1 Protein Homology CDS 24877 25749 . + 0 ID=cds-HIH2189267.1;Parent=gene-ACYKJH_001157;Dbxref=NCBI_GP:HIH2189267.1;Name=HIH2189267.1;Ontology_term=GO:0006633,GO:0004314,GO:0016740;gbkey=CDS;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA,transferase activity|0016740||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343576.1;locus_tag=ACYKJH_001157;product=ACP S-malonyltransferase;protein_id=HIH2189267.1;transl_table=11 DBLQKK010000015.1 tpg gene 25746 26435 . + . ID=gene-ACYKJH_001158;Name=pfs;gbkey=Gene;gene=pfs;gene_biotype=protein_coding;locus_tag=ACYKJH_001158 DBLQKK010000015.1 Protein Homology CDS 25746 26435 . + 0 ID=cds-HIH2189268.1;Parent=gene-ACYKJH_001158;Dbxref=NCBI_GP:HIH2189268.1;Name=HIH2189268.1;gbkey=CDS;gene=pfs;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343577.1;locus_tag=ACYKJH_001158;product=aminodeoxyfutalosine nucleosidase;protein_id=HIH2189268.1;transl_table=11 DBLQKK010000015.1 tpg gene 26432 27187 . + . ID=gene-ACYKJH_001159;Name=ACYKJH_001159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001159 DBLQKK010000015.1 Protein Homology CDS 26432 27187 . + 0 ID=cds-HIH2189269.1;Parent=gene-ACYKJH_001159;Dbxref=NCBI_GP:HIH2189269.1;Name=HIH2189269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343578.1;locus_tag=ACYKJH_001159;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=HIH2189269.1;transl_table=11 DBLQKK010000015.1 tpg gene 27192 27713 . + . ID=gene-ACYKJH_001160;Name=ACYKJH_001160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001160 DBLQKK010000015.1 Protein Homology CDS 27192 27713 . + 0 ID=cds-HIH2189270.1;Parent=gene-ACYKJH_001160;Dbxref=NCBI_GP:HIH2189270.1;Name=HIH2189270.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343579.1;locus_tag=ACYKJH_001160;product=isochorismatase family cysteine hydrolase;protein_id=HIH2189270.1;transl_table=11 DBLQKK010000015.1 tpg gene 27713 28327 . + . ID=gene-ACYKJH_001161;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=ACYKJH_001161 DBLQKK010000015.1 Protein Homology CDS 27713 28327 . + 0 ID=cds-HIH2189271.1;Parent=gene-ACYKJH_001161;Dbxref=NCBI_GP:HIH2189271.1;Name=HIH2189271.1;gbkey=CDS;gene=recO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343580.1;locus_tag=ACYKJH_001161;product=recombination protein RecO;protein_id=HIH2189271.1;transl_table=11 DBLQKK010000015.1 tpg gene 28324 28731 . + . ID=gene-ACYKJH_001162;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=ACYKJH_001162 DBLQKK010000015.1 Protein Homology CDS 28324 28731 . + 0 ID=cds-HIH2189272.1;Parent=gene-ACYKJH_001162;Dbxref=NCBI_GP:HIH2189272.1;Name=HIH2189272.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343581.1;locus_tag=ACYKJH_001162;product=rRNA maturation RNase YbeY;protein_id=HIH2189272.1;transl_table=11 DBLQKK010000015.1 tpg gene 28855 29544 . + . ID=gene-ACYKJH_001163;Name=ACYKJH_001163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001163 DBLQKK010000015.1 Protein Homology CDS 28855 29544 . + 0 ID=cds-HIH2189273.1;Parent=gene-ACYKJH_001163;Dbxref=NCBI_GP:HIH2189273.1;Name=HIH2189273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343582.1;locus_tag=ACYKJH_001163;product=hypothetical protein;protein_id=HIH2189273.1;transl_table=11 DBLQKK010000015.1 tpg gene 29569 30495 . - . ID=gene-ACYKJH_001164;Name=ACYKJH_001164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001164 DBLQKK010000015.1 Protein Homology CDS 29569 30495 . - 0 ID=cds-HIH2189274.1;Parent=gene-ACYKJH_001164;Dbxref=NCBI_GP:HIH2189274.1;Name=HIH2189274.1;Ontology_term=GO:0008033,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343583.1;locus_tag=ACYKJH_001164;product=tRNA dihydrouridine synthase;protein_id=HIH2189274.1;transl_table=11 DBLQKK010000015.1 tpg gene 30492 31478 . - . ID=gene-ACYKJH_001165;Name=ACYKJH_001165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001165 DBLQKK010000015.1 Protein Homology CDS 30492 31478 . - 0 ID=cds-HIH2189275.1;Parent=gene-ACYKJH_001165;Dbxref=NCBI_GP:HIH2189275.1;Name=HIH2189275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343584.1;locus_tag=ACYKJH_001165;product=hypothetical protein;protein_id=HIH2189275.1;transl_table=11 DBLQKK010000015.1 tpg gene 31468 31830 . - . ID=gene-ACYKJH_001166;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=ACYKJH_001166 DBLQKK010000015.1 Protein Homology CDS 31468 31830 . - 0 ID=cds-HIH2189276.1;Parent=gene-ACYKJH_001166;Dbxref=NCBI_GP:HIH2189276.1;Name=HIH2189276.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343585.1;locus_tag=ACYKJH_001166;product=molecular chaperone DnaK suppressor DksA;protein_id=HIH2189276.1;transl_table=11 DBLQKK010000015.1 tpg gene 31842 32291 . - . ID=gene-ACYKJH_001167;Name=ACYKJH_001167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001167 DBLQKK010000015.1 Protein Homology CDS 31842 32291 . - 0 ID=cds-HIH2189277.1;Parent=gene-ACYKJH_001167;Dbxref=NCBI_GP:HIH2189277.1;Name=HIH2189277.1;Ontology_term=GO:0032259,GO:0003723,GO:0070038,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (pseudouridine-N3-)-methyltransferase activity|0070038||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002857335.1;locus_tag=ACYKJH_001167;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=HIH2189277.1;transl_table=11 DBLQKK010000015.1 tpg gene 32293 33135 . - . ID=gene-ACYKJH_001168;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=ACYKJH_001168 DBLQKK010000015.1 Protein Homology CDS 32293 33135 . - 0 ID=cds-HIH2189278.1;Parent=gene-ACYKJH_001168;Dbxref=NCBI_GP:HIH2189278.1;Name=HIH2189278.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343587.1;locus_tag=ACYKJH_001168;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=HIH2189278.1;transl_table=11 DBLQKK010000015.1 tpg gene 33145 33867 . - . ID=gene-ACYKJH_001169;Name=ACYKJH_001169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001169 DBLQKK010000015.1 Protein Homology CDS 33145 33867 . - 0 ID=cds-HIH2189279.1;Parent=gene-ACYKJH_001169;Dbxref=NCBI_GP:HIH2189279.1;Name=HIH2189279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343588.1;locus_tag=ACYKJH_001169;product=inositol monophosphatase family protein;protein_id=HIH2189279.1;transl_table=11 DBLQKK010000015.1 tpg gene 33867 36086 . - . ID=gene-ACYKJH_001170;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=ACYKJH_001170 DBLQKK010000015.1 Protein Homology CDS 33867 36086 . - 0 ID=cds-HIH2189280.1;Parent=gene-ACYKJH_001170;Dbxref=NCBI_GP:HIH2189280.1;Name=HIH2189280.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343589.1;locus_tag=ACYKJH_001170;product=outer membrane protein assembly factor BamA;protein_id=HIH2189280.1;transl_table=11 DBLQKK010000015.1 tpg gene 36163 36990 . + . ID=gene-ACYKJH_001171;Name=ACYKJH_001171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001171 DBLQKK010000015.1 Protein Homology CDS 36163 36990 . + 0 ID=cds-HIH2189281.1;Parent=gene-ACYKJH_001171;Dbxref=NCBI_GP:HIH2189281.1;Name=HIH2189281.1;Ontology_term=GO:0006571,GO:0004665,GO:0008977;gbkey=CDS;go_function=prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343590.1;locus_tag=ACYKJH_001171;product=prephenate dehydrogenase;protein_id=HIH2189281.1;transl_table=11 DBLQKK010000015.1 tpg gene 37070 38443 . + . ID=gene-ACYKJH_001172;Name=ACYKJH_001172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001172 DBLQKK010000015.1 Protein Homology CDS 37070 38443 . + 0 ID=cds-HIH2189282.1;Parent=gene-ACYKJH_001172;Dbxref=NCBI_GP:HIH2189282.1;Name=HIH2189282.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343591.1;locus_tag=ACYKJH_001172;product=M23 family metallopeptidase;protein_id=HIH2189282.1;transl_table=11 DBLQKK010000015.1 tpg gene 38443 39327 . + . ID=gene-ACYKJH_001173;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=ACYKJH_001173 DBLQKK010000015.1 Protein Homology CDS 38443 39327 . + 0 ID=cds-HIH2189283.1;Parent=gene-ACYKJH_001173;Dbxref=NCBI_GP:HIH2189283.1;Name=HIH2189283.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343592.1;locus_tag=ACYKJH_001173;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=HIH2189283.1;transl_table=11 DBLQKK010000015.1 tpg gene 39366 39767 . + . ID=gene-ACYKJH_001174;Name=ACYKJH_001174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001174 DBLQKK010000015.1 Protein Homology CDS 39366 39767 . + 0 ID=cds-HIH2189284.1;Parent=gene-ACYKJH_001174;Dbxref=NCBI_GP:HIH2189284.1;Name=HIH2189284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343593.1;locus_tag=ACYKJH_001174;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaB;protein_id=HIH2189284.1;transl_table=11 DBLQKK010000015.1 tpg gene 39776 40654 . + . ID=gene-ACYKJH_001175;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=ACYKJH_001175 DBLQKK010000015.1 Protein Homology CDS 39776 40654 . + 0 ID=cds-HIH2189285.1;Parent=gene-ACYKJH_001175;Dbxref=NCBI_GP:HIH2189285.1;Name=HIH2189285.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343594.1;locus_tag=ACYKJH_001175;product=homoserine kinase;protein_id=HIH2189285.1;transl_table=11 DBLQKK010000015.1 tpg gene 40679 40936 . + . ID=gene-ACYKJH_001176;Name=ACYKJH_001176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001176 DBLQKK010000015.1 Protein Homology CDS 40679 40936 . + 0 ID=cds-HIH2189286.1;Parent=gene-ACYKJH_001176;Dbxref=NCBI_GP:HIH2189286.1;Name=HIH2189286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343595.1;locus_tag=ACYKJH_001176;product=DUF448 domain-containing protein;protein_id=HIH2189286.1;transl_table=11 DBLQKK010000015.1 tpg gene 40923 43538 . + . ID=gene-ACYKJH_001177;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=ACYKJH_001177 DBLQKK010000015.1 Protein Homology CDS 40923 43538 . + 0 ID=cds-HIH2189287.1;Parent=gene-ACYKJH_001177;Dbxref=NCBI_GP:HIH2189287.1;Name=HIH2189287.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343596.1;locus_tag=ACYKJH_001177;product=translation initiation factor IF-2;protein_id=HIH2189287.1;transl_table=11 DBLQKK010000015.1 tpg gene 43535 43897 . + . ID=gene-ACYKJH_001178;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=ACYKJH_001178 DBLQKK010000015.1 Protein Homology CDS 43535 43897 . + 0 ID=cds-HIH2189288.1;Parent=gene-ACYKJH_001178;Dbxref=NCBI_GP:HIH2189288.1;Name=HIH2189288.1;gbkey=CDS;gene=rbfA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343597.1;locus_tag=ACYKJH_001178;product=30S ribosome-binding factor RbfA;protein_id=HIH2189288.1;transl_table=11 DBLQKK010000015.1 tpg gene 43887 44309 . + . ID=gene-ACYKJH_001179;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=ACYKJH_001179 DBLQKK010000015.1 Protein Homology CDS 43887 44309 . + 0 ID=cds-HIH2189289.1;Parent=gene-ACYKJH_001179;Dbxref=NCBI_GP:HIH2189289.1;Name=HIH2189289.1;gbkey=CDS;gene=rimP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343598.1;locus_tag=ACYKJH_001179;product=ribosome maturation factor RimP;protein_id=HIH2189289.1;transl_table=11 DBLQKK010000015.1 tpg gene 44356 44942 . + . ID=gene-ACYKJH_001180;Name=ACYKJH_001180;end_range=44942,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001180;partial=true DBLQKK010000015.1 Protein Homology CDS 44356 44942 . + 0 ID=cds-HIH2189290.1;Parent=gene-ACYKJH_001180;Dbxref=NCBI_GP:HIH2189290.1;Name=HIH2189290.1;end_range=44942,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343599.1;locus_tag=ACYKJH_001180;partial=true;product=McrB family protein;protein_id=HIH2189290.1;transl_table=11 ##sequence-region DBLQKK010000016.1 1 42679 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000016.1 tpg region 1 42679 . + . ID=DBLQKK010000016.1:1..42679;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000016.1 tpg gene 41 451 . + . ID=gene-ACYKJH_001181;Name=ACYKJH_001181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001181 DBLQKK010000016.1 Protein Homology CDS 41 451 . + 0 ID=cds-HIH2189291.1;Parent=gene-ACYKJH_001181;Dbxref=NCBI_GP:HIH2189291.1;Name=HIH2189291.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.6;locus_tag=ACYKJH_001181;product=MFS transporter;protein_id=HIH2189291.1;transl_table=11 DBLQKK010000016.1 tpg gene 439 1260 . + . ID=gene-ACYKJH_001182;Name=ACYKJH_001182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001182 DBLQKK010000016.1 Protein Homology CDS 439 1260 . + 0 ID=cds-HIH2189292.1;Parent=gene-ACYKJH_001182;Dbxref=NCBI_GP:HIH2189292.1;Name=HIH2189292.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.6;locus_tag=ACYKJH_001182;product=MFS transporter;protein_id=HIH2189292.1;transl_table=11 DBLQKK010000016.1 tpg gene 1262 2413 . + . ID=gene-ACYKJH_001183;Name=hipO;gbkey=Gene;gene=hipO;gene_biotype=protein_coding;locus_tag=ACYKJH_001183 DBLQKK010000016.1 Protein Homology CDS 1262 2413 . + 0 ID=cds-HIH2189293.1;Parent=gene-ACYKJH_001183;Dbxref=NCBI_GP:HIH2189293.1;Name=HIH2189293.1;Ontology_term=GO:0016787,GO:0016810;gbkey=CDS;gene=hipO;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344380.1;locus_tag=ACYKJH_001183;product=M20 aminoacylase family protein;protein_id=HIH2189293.1;transl_table=11 DBLQKK010000016.1 tpg gene 2417 3157 . - . ID=gene-ACYKJH_001184;Name=ACYKJH_001184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001184 DBLQKK010000016.1 Protein Homology CDS 2417 3157 . - 0 ID=cds-HIH2189294.1;Parent=gene-ACYKJH_001184;Dbxref=NCBI_GP:HIH2189294.1;Name=HIH2189294.1;Ontology_term=GO:0033194;gbkey=CDS;go_process=response to hydroperoxide|0033194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344379.1;locus_tag=ACYKJH_001184;product=YaaA family protein;protein_id=HIH2189294.1;transl_table=11 DBLQKK010000016.1 tpg gene 3250 4368 . - . ID=gene-ACYKJH_001185;Name=jlpA;gbkey=Gene;gene=jlpA;gene_biotype=protein_coding;locus_tag=ACYKJH_001185 DBLQKK010000016.1 Protein Homology CDS 3250 4368 . - 0 ID=cds-HIH2189295.1;Parent=gene-ACYKJH_001185;Dbxref=NCBI_GP:HIH2189295.1;Name=HIH2189295.1;gbkey=CDS;gene=jlpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_254520897.1;locus_tag=ACYKJH_001185;product=lipoprotein adhesin JlpA;protein_id=HIH2189295.1;transl_table=11 DBLQKK010000016.1 tpg gene 4588 5427 . + . ID=gene-ACYKJH_001186;Name=cjaA;gbkey=Gene;gene=cjaA;gene_biotype=protein_coding;locus_tag=ACYKJH_001186 DBLQKK010000016.1 Protein Homology CDS 4588 5427 . + 0 ID=cds-HIH2189296.1;Parent=gene-ACYKJH_001186;Dbxref=NCBI_GP:HIH2189296.1;Name=HIH2189296.1;gbkey=CDS;gene=cjaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344377.1;locus_tag=ACYKJH_001186;product=cysteine ABC transporter substrate-binding protein;protein_id=HIH2189296.1;transl_table=11 DBLQKK010000016.1 tpg gene 5468 6715 . + . ID=gene-ACYKJH_001187;Name=cjaB;gbkey=Gene;gene=cjaB;gene_biotype=protein_coding;locus_tag=ACYKJH_001187 DBLQKK010000016.1 Protein Homology CDS 5468 6715 . + 0 ID=cds-HIH2189297.1;Parent=gene-ACYKJH_001187;Dbxref=NCBI_GP:HIH2189297.1;Name=HIH2189297.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=cjaB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344376.1;locus_tag=ACYKJH_001187;product=MFS transporter;protein_id=HIH2189297.1;transl_table=11 DBLQKK010000016.1 tpg gene 6698 7966 . - . ID=gene-ACYKJH_001188;Name=ACYKJH_001188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001188 DBLQKK010000016.1 Protein Homology CDS 6698 7966 . - 0 ID=cds-HIH2189298.1;Parent=gene-ACYKJH_001188;Dbxref=NCBI_GP:HIH2189298.1;Name=HIH2189298.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344375.1;locus_tag=ACYKJH_001188;product=M20/M25/M40 family metallo-hydrolase;protein_id=HIH2189298.1;transl_table=11 DBLQKK010000016.1 tpg gene 8034 8561 . + . ID=gene-ACYKJH_001189;Name=ACYKJH_001189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001189 DBLQKK010000016.1 Protein Homology CDS 8034 8561 . + 0 ID=cds-HIH2189299.1;Parent=gene-ACYKJH_001189;Dbxref=NCBI_GP:HIH2189299.1;Name=HIH2189299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344374.1;locus_tag=ACYKJH_001189;product=thermonuclease family protein;protein_id=HIH2189299.1;transl_table=11 DBLQKK010000016.1 tpg gene 8570 8743 . + . ID=gene-ACYKJH_001190;Name=ACYKJH_001190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001190 DBLQKK010000016.1 Protein Homology CDS 8570 8743 . + 0 ID=cds-HIH2189300.1;Parent=gene-ACYKJH_001190;Dbxref=NCBI_GP:HIH2189300.1;Name=HIH2189300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344373.1;locus_tag=ACYKJH_001190;product=hypothetical protein;protein_id=HIH2189300.1;transl_table=11 DBLQKK010000016.1 tpg gene 8744 9322 . - . ID=gene-ACYKJH_001191;Name=ACYKJH_001191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001191 DBLQKK010000016.1 Protein Homology CDS 8744 9322 . - 0 ID=cds-HIH2189301.1;Parent=gene-ACYKJH_001191;Dbxref=NCBI_GP:HIH2189301.1;Name=HIH2189301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344372.1;locus_tag=ACYKJH_001191;product=hypothetical protein;protein_id=HIH2189301.1;transl_table=11 DBLQKK010000016.1 tpg gene 9395 10285 . - . ID=gene-ACYKJH_001192;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=ACYKJH_001192 DBLQKK010000016.1 Protein Homology CDS 9395 10285 . - 0 ID=cds-HIH2189302.1;Parent=gene-ACYKJH_001192;Dbxref=NCBI_GP:HIH2189302.1;Name=HIH2189302.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344371.1;locus_tag=ACYKJH_001192;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=HIH2189302.1;transl_table=11 DBLQKK010000016.1 tpg pseudogene 10368 12096 . - . ID=gene-ACYKJH_001193;Name=ACYKJH_001193;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001193;pseudo=true DBLQKK010000016.1 Protein Homology CDS 10368 12096 . - 0 ID=cds-ACYKJH_001193;Parent=gene-ACYKJH_001193;Note=frameshifted;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344370.1;locus_tag=ACYKJH_001193;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;pseudo=true;transl_table=11 DBLQKK010000016.1 tpg gene 12155 12295 . - . ID=gene-ACYKJH_001194;Name=ACYKJH_001194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001194 DBLQKK010000016.1 Protein Homology CDS 12155 12295 . - 0 ID=cds-HIH2189303.1;Parent=gene-ACYKJH_001194;Dbxref=NCBI_GP:HIH2189303.1;Name=HIH2189303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344369.1;locus_tag=ACYKJH_001194;product=hypothetical protein;protein_id=HIH2189303.1;transl_table=11 DBLQKK010000016.1 tpg gene 12558 12881 . - . ID=gene-ACYKJH_001195;Name=ACYKJH_001195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001195 DBLQKK010000016.1 Protein Homology CDS 12558 12881 . - 0 ID=cds-HIH2189304.1;Parent=gene-ACYKJH_001195;Dbxref=NCBI_GP:HIH2189304.1;Name=HIH2189304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344367.1;locus_tag=ACYKJH_001195;product=hypothetical protein;protein_id=HIH2189304.1;transl_table=11 DBLQKK010000016.1 tpg gene 12972 13448 . - . ID=gene-ACYKJH_001196;Name=ACYKJH_001196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001196 DBLQKK010000016.1 GeneMarkS-2+ CDS 12972 13448 . - 0 ID=cds-HIH2189305.1;Parent=gene-ACYKJH_001196;Dbxref=NCBI_GP:HIH2189305.1;Name=HIH2189305.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_001196;product=hemagglutinin;protein_id=HIH2189305.1;transl_table=11 DBLQKK010000016.1 tpg gene 13680 13922 . - . ID=gene-ACYKJH_001197;Name=ACYKJH_001197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001197 DBLQKK010000016.1 GeneMarkS-2+ CDS 13680 13922 . - 0 ID=cds-HIH2189306.1;Parent=gene-ACYKJH_001197;Dbxref=NCBI_GP:HIH2189306.1;Name=HIH2189306.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_001197;product=hypothetical protein;protein_id=HIH2189306.1;transl_table=11 DBLQKK010000016.1 tpg pseudogene 14291 16575 . - . ID=gene-ACYKJH_001198;Name=ACYKJH_001198;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001198;pseudo=true DBLQKK010000016.1 Protein Homology CDS 14291 16575 . - 0 ID=cds-ACYKJH_001198;Parent=gene-ACYKJH_001198;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344364.1;locus_tag=ACYKJH_001198;product=hypothetical protein;pseudo=true;transl_table=11 DBLQKK010000016.1 tpg gene 16718 17092 . + . ID=gene-ACYKJH_001199;Name=ACYKJH_001199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001199 DBLQKK010000016.1 Protein Homology CDS 16718 17092 . + 0 ID=cds-HIH2189307.1;Parent=gene-ACYKJH_001199;Dbxref=NCBI_GP:HIH2189307.1;Name=HIH2189307.1;Ontology_term=GO:0047617;gbkey=CDS;go_function=fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344363.1;locus_tag=ACYKJH_001199;product=YbgC/FadM family acyl-CoA thioesterase;protein_id=HIH2189307.1;transl_table=11 DBLQKK010000016.1 tpg gene 17084 18274 . - . ID=gene-ACYKJH_001200;Name=ACYKJH_001200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001200 DBLQKK010000016.1 Protein Homology CDS 17084 18274 . - 0 ID=cds-HIH2189308.1;Parent=gene-ACYKJH_001200;Dbxref=NCBI_GP:HIH2189308.1;Name=HIH2189308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344362.1;locus_tag=ACYKJH_001200;product=hypothetical protein;protein_id=HIH2189308.1;transl_table=11 DBLQKK010000016.1 tpg gene 18271 18879 . - . ID=gene-ACYKJH_001201;Name=ACYKJH_001201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001201 DBLQKK010000016.1 Protein Homology CDS 18271 18879 . - 0 ID=cds-HIH2189309.1;Parent=gene-ACYKJH_001201;Dbxref=NCBI_GP:HIH2189309.1;Name=HIH2189309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344361.1;locus_tag=ACYKJH_001201;product=uracil-DNA glycosylase family protein;protein_id=HIH2189309.1;transl_table=11 DBLQKK010000016.1 tpg gene 18876 19355 . - . ID=gene-ACYKJH_001202;Name=ACYKJH_001202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001202 DBLQKK010000016.1 Protein Homology CDS 18876 19355 . - 0 ID=cds-HIH2189310.1;Parent=gene-ACYKJH_001202;Dbxref=NCBI_GP:HIH2189310.1;Name=HIH2189310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344360.1;locus_tag=ACYKJH_001202;product=N-acetyltransferase family protein;protein_id=HIH2189310.1;transl_table=11 DBLQKK010000016.1 tpg gene 19486 19620 . + . ID=gene-ACYKJH_001203;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=ACYKJH_001203 DBLQKK010000016.1 Protein Homology CDS 19486 19620 . + 0 ID=cds-HIH2189311.1;Parent=gene-ACYKJH_001203;Dbxref=NCBI_GP:HIH2189311.1;Name=HIH2189311.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344359.1;locus_tag=ACYKJH_001203;product=50S ribosomal protein L34;protein_id=HIH2189311.1;transl_table=11 DBLQKK010000016.1 tpg gene 19617 19943 . + . ID=gene-ACYKJH_001204;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=ACYKJH_001204 DBLQKK010000016.1 Protein Homology CDS 19617 19943 . + 0 ID=cds-HIH2189312.1;Parent=gene-ACYKJH_001204;Dbxref=NCBI_GP:HIH2189312.1;Name=HIH2189312.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344358.1;locus_tag=ACYKJH_001204;product=ribonuclease P protein component;protein_id=HIH2189312.1;transl_table=11 DBLQKK010000016.1 tpg gene 19940 20281 . + . ID=gene-ACYKJH_001205;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=ACYKJH_001205 DBLQKK010000016.1 Protein Homology CDS 19940 20281 . + 0 ID=cds-HIH2189313.1;Parent=gene-ACYKJH_001205;Dbxref=NCBI_GP:HIH2189313.1;Name=HIH2189313.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344357.1;locus_tag=ACYKJH_001205;product=membrane protein insertion efficiency factor YidD;protein_id=HIH2189313.1;transl_table=11 DBLQKK010000016.1 tpg gene 20278 21870 . + . ID=gene-ACYKJH_001206;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=ACYKJH_001206 DBLQKK010000016.1 Protein Homology CDS 20278 21870 . + 0 ID=cds-HIH2189314.1;Parent=gene-ACYKJH_001206;Dbxref=NCBI_GP:HIH2189314.1;Name=HIH2189314.1;gbkey=CDS;gene=yidC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002875431.1;locus_tag=ACYKJH_001206;product=membrane protein insertase YidC;protein_id=HIH2189314.1;transl_table=11 DBLQKK010000016.1 tpg gene 21867 22685 . + . ID=gene-ACYKJH_001207;Name=ACYKJH_001207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001207 DBLQKK010000016.1 Protein Homology CDS 21867 22685 . + 0 ID=cds-HIH2189315.1;Parent=gene-ACYKJH_001207;Dbxref=NCBI_GP:HIH2189315.1;Name=HIH2189315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344355.1;locus_tag=ACYKJH_001207;product=Jag N-terminal domain-containing protein;protein_id=HIH2189315.1;transl_table=11 DBLQKK010000016.1 tpg gene 22678 24006 . + . ID=gene-ACYKJH_001208;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=ACYKJH_001208 DBLQKK010000016.1 Protein Homology CDS 22678 24006 . + 0 ID=cds-HIH2189316.1;Parent=gene-ACYKJH_001208;Dbxref=NCBI_GP:HIH2189316.1;Name=HIH2189316.1;Ontology_term=GO:0006400,GO:0003924,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344354.1;locus_tag=ACYKJH_001208;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=HIH2189316.1;transl_table=11 DBLQKK010000016.1 tpg gene 24017 26203 . + . ID=gene-ACYKJH_001209;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=ACYKJH_001209 DBLQKK010000016.1 Protein Homology CDS 24017 26203 . + 0 ID=cds-HIH2189317.1;Parent=gene-ACYKJH_001209;Dbxref=NCBI_GP:HIH2189317.1;Name=HIH2189317.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344353.1;locus_tag=ACYKJH_001209;product=phosphoribosylformylglycinamidine synthase subunit PurL;protein_id=HIH2189317.1;transl_table=11 DBLQKK010000016.1 tpg gene 26200 26970 . + . ID=gene-ACYKJH_001210;Name=ACYKJH_001210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001210 DBLQKK010000016.1 Protein Homology CDS 26200 26970 . + 0 ID=cds-HIH2189318.1;Parent=gene-ACYKJH_001210;Dbxref=NCBI_GP:HIH2189318.1;Name=HIH2189318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344352.1;locus_tag=ACYKJH_001210;product=DnaJ domain-containing protein;protein_id=HIH2189318.1;transl_table=11 DBLQKK010000016.1 tpg gene 26973 28505 . + . ID=gene-ACYKJH_001211;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=ACYKJH_001211 DBLQKK010000016.1 Protein Homology CDS 26973 28505 . + 0 ID=cds-HIH2189319.1;Parent=gene-ACYKJH_001211;Dbxref=NCBI_GP:HIH2189319.1;Name=HIH2189319.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344351.1;locus_tag=ACYKJH_001211;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=HIH2189319.1;transl_table=11 DBLQKK010000016.1 tpg gene 28604 29053 . + . ID=gene-ACYKJH_001212;Name=ACYKJH_001212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001212 DBLQKK010000016.1 Protein Homology CDS 28604 29053 . + 0 ID=cds-HIH2189320.1;Parent=gene-ACYKJH_001212;Dbxref=NCBI_GP:HIH2189320.1;Name=HIH2189320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014517250.1;locus_tag=ACYKJH_001212;product=hypothetical protein;protein_id=HIH2189320.1;transl_table=11 DBLQKK010000016.1 tpg gene 29508 30041 . + . ID=gene-ACYKJH_001213;Name=ACYKJH_001213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001213 DBLQKK010000016.1 Protein Homology CDS 29508 30041 . + 0 ID=cds-HIH2189321.1;Parent=gene-ACYKJH_001213;Dbxref=NCBI_GP:HIH2189321.1;Name=HIH2189321.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895878.1;locus_tag=ACYKJH_001213;product=methyl-accepting chemotaxis protein;protein_id=HIH2189321.1;transl_table=11 DBLQKK010000016.1 tpg gene 30057 30176 . + . ID=gene-ACYKJH_001214;Name=ACYKJH_001214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001214 DBLQKK010000016.1 Protein Homology CDS 30057 30176 . + 0 ID=cds-HIH2189322.1;Parent=gene-ACYKJH_001214;Dbxref=NCBI_GP:HIH2189322.1;Name=HIH2189322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002886201.1;locus_tag=ACYKJH_001214;product=MCP-domain signal transduction protein;protein_id=HIH2189322.1;transl_table=11 DBLQKK010000016.1 tpg gene 30192 30626 . + . ID=gene-ACYKJH_001215;Name=ACYKJH_001215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001215 DBLQKK010000016.1 Protein Homology CDS 30192 30626 . + 0 ID=cds-HIH2189323.1;Parent=gene-ACYKJH_001215;Dbxref=NCBI_GP:HIH2189323.1;Name=HIH2189323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344348.1;locus_tag=ACYKJH_001215;product=META domain-containing protein;protein_id=HIH2189323.1;transl_table=11 DBLQKK010000016.1 tpg gene 30725 31702 . + . ID=gene-ACYKJH_001216;Name=ACYKJH_001216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001216 DBLQKK010000016.1 Protein Homology CDS 30725 31702 . + 0 ID=cds-HIH2189324.1;Parent=gene-ACYKJH_001216;Dbxref=NCBI_GP:HIH2189324.1;Name=HIH2189324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344347.1;locus_tag=ACYKJH_001216;product=agmatine deiminase family protein;protein_id=HIH2189324.1;transl_table=11 DBLQKK010000016.1 tpg gene 31699 32586 . + . ID=gene-ACYKJH_001217;Name=ACYKJH_001217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001217 DBLQKK010000016.1 Protein Homology CDS 31699 32586 . + 0 ID=cds-HIH2189325.1;Parent=gene-ACYKJH_001217;Dbxref=NCBI_GP:HIH2189325.1;Name=HIH2189325.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344346.1;locus_tag=ACYKJH_001217;product=cation diffusion facilitator family transporter;protein_id=HIH2189325.1;transl_table=11 DBLQKK010000016.1 tpg gene 32583 33455 . + . ID=gene-ACYKJH_001218;Name=ACYKJH_001218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001218 DBLQKK010000016.1 Protein Homology CDS 32583 33455 . + 0 ID=cds-HIH2189326.1;Parent=gene-ACYKJH_001218;Dbxref=NCBI_GP:HIH2189326.1;Name=HIH2189326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344345.1;locus_tag=ACYKJH_001218;product=N-carbamoylputrescine amidohydrolase;protein_id=HIH2189326.1;transl_table=11 DBLQKK010000016.1 tpg gene 33467 34813 . - . ID=gene-ACYKJH_001219;Name=ACYKJH_001219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001219 DBLQKK010000016.1 Protein Homology CDS 33467 34813 . - 0 ID=cds-HIH2189327.1;Parent=gene-ACYKJH_001219;Dbxref=NCBI_GP:HIH2189327.1;Name=HIH2189327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344344.1;locus_tag=ACYKJH_001219;product=SH3 domain-containing protein;protein_id=HIH2189327.1;transl_table=11 DBLQKK010000016.1 tpg gene 34862 36205 . + . ID=gene-ACYKJH_001220;Name=pif1;gbkey=Gene;gene=pif1;gene_biotype=protein_coding;locus_tag=ACYKJH_001220 DBLQKK010000016.1 Protein Homology CDS 34862 36205 . + 0 ID=cds-HIH2189328.1;Parent=gene-ACYKJH_001220;Dbxref=NCBI_GP:HIH2189328.1;Name=HIH2189328.1;gbkey=CDS;gene=pif1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344343.1;locus_tag=ACYKJH_001220;product=ATP-dependent DNA helicase Pif1;protein_id=HIH2189328.1;transl_table=11 DBLQKK010000016.1 tpg gene 36215 36949 . + . ID=gene-ACYKJH_001221;Name=ACYKJH_001221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001221 DBLQKK010000016.1 Protein Homology CDS 36215 36949 . + 0 ID=cds-HIH2189329.1;Parent=gene-ACYKJH_001221;Dbxref=NCBI_GP:HIH2189329.1;Name=HIH2189329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344342.1;locus_tag=ACYKJH_001221;product=hypothetical protein;protein_id=HIH2189329.1;transl_table=11 DBLQKK010000016.1 tpg gene 36946 37455 . - . ID=gene-ACYKJH_001222;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=ACYKJH_001222 DBLQKK010000016.1 Protein Homology CDS 36946 37455 . - 0 ID=cds-HIH2189330.1;Parent=gene-ACYKJH_001222;Dbxref=NCBI_GP:HIH2189330.1;Name=HIH2189330.1;gbkey=CDS;gene=lolA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344341.1;locus_tag=ACYKJH_001222;product=LolA-like outer membrane lipoprotein chaperone;protein_id=HIH2189330.1;transl_table=11 DBLQKK010000016.1 tpg gene 37554 40142 . + . ID=gene-ACYKJH_001223;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=ACYKJH_001223 DBLQKK010000016.1 Protein Homology CDS 37554 40142 . + 0 ID=cds-HIH2189331.1;Parent=gene-ACYKJH_001223;Dbxref=NCBI_GP:HIH2189331.1;Name=HIH2189331.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344340.1;locus_tag=ACYKJH_001223;product=preprotein translocase subunit SecA;protein_id=HIH2189331.1;transl_table=11 DBLQKK010000016.1 tpg gene 40139 41344 . + . ID=gene-ACYKJH_001224;Name=ACYKJH_001224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001224 DBLQKK010000016.1 Protein Homology CDS 40139 41344 . + 0 ID=cds-HIH2189332.1;Parent=gene-ACYKJH_001224;Dbxref=NCBI_GP:HIH2189332.1;Name=HIH2189332.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344339.1;locus_tag=ACYKJH_001224;product=ABC transporter permease;protein_id=HIH2189332.1;transl_table=11 DBLQKK010000016.1 tpg gene 41367 42152 . + . ID=gene-ACYKJH_001225;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=ACYKJH_001225 DBLQKK010000016.1 Protein Homology CDS 41367 42152 . + 0 ID=cds-HIH2189333.1;Parent=gene-ACYKJH_001225;Dbxref=NCBI_GP:HIH2189333.1;Name=HIH2189333.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;gene=glnP;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344338.1;locus_tag=ACYKJH_001225;product=amino acid ABC transporter permease;protein_id=HIH2189333.1;transl_table=11 DBLQKK010000016.1 tpg gene 42214 42289 . + . ID=gene-ACYKJH_001226;Name=ACYKJH_001226;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_001226 DBLQKK010000016.1 tRNAscan-SE tRNA 42214 42289 . + . ID=rna-ACYKJH_001226;Parent=gene-ACYKJH_001226;anticodon=(pos:42247..42249);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_001226;product=tRNA-Lys DBLQKK010000016.1 tRNAscan-SE exon 42214 42289 . + . ID=exon-ACYKJH_001226-1;Parent=rna-ACYKJH_001226;anticodon=(pos:42247..42249);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_001226;product=tRNA-Lys DBLQKK010000016.1 tpg gene 42297 42372 . + . ID=gene-ACYKJH_001227;Name=ACYKJH_001227;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_001227 DBLQKK010000016.1 tRNAscan-SE tRNA 42297 42372 . + . ID=rna-ACYKJH_001227;Parent=gene-ACYKJH_001227;anticodon=(pos:42330..42332);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_001227;product=tRNA-Val DBLQKK010000016.1 tRNAscan-SE exon 42297 42372 . + . ID=exon-ACYKJH_001227-1;Parent=rna-ACYKJH_001227;anticodon=(pos:42330..42332);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_001227;product=tRNA-Val DBLQKK010000016.1 tpg gene 42424 42500 . + . ID=gene-ACYKJH_001228;Name=ACYKJH_001228;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_001228 DBLQKK010000016.1 tRNAscan-SE tRNA 42424 42500 . + . ID=rna-ACYKJH_001228;Parent=gene-ACYKJH_001228;anticodon=(pos:42458..42460);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_001228;product=tRNA-Asp DBLQKK010000016.1 tRNAscan-SE exon 42424 42500 . + . ID=exon-ACYKJH_001228-1;Parent=rna-ACYKJH_001228;anticodon=(pos:42458..42460);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_001228;product=tRNA-Asp DBLQKK010000016.1 tpg gene 42505 42580 . + . ID=gene-ACYKJH_001229;Name=ACYKJH_001229;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_001229 DBLQKK010000016.1 tRNAscan-SE tRNA 42505 42580 . + . ID=rna-ACYKJH_001229;Parent=gene-ACYKJH_001229;anticodon=(pos:42538..42540);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_001229;product=tRNA-Lys DBLQKK010000016.1 tRNAscan-SE exon 42505 42580 . + . ID=exon-ACYKJH_001229-1;Parent=rna-ACYKJH_001229;anticodon=(pos:42538..42540);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_001229;product=tRNA-Lys DBLQKK010000016.1 tpg gene 42600 42675 . + . ID=gene-ACYKJH_001230;Name=ACYKJH_001230;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_001230 DBLQKK010000016.1 tRNAscan-SE tRNA 42600 42675 . + . ID=rna-ACYKJH_001230;Parent=gene-ACYKJH_001230;anticodon=(pos:42633..42635);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_001230;product=tRNA-Arg DBLQKK010000016.1 tRNAscan-SE exon 42600 42675 . + . ID=exon-ACYKJH_001230-1;Parent=rna-ACYKJH_001230;anticodon=(pos:42633..42635);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_001230;product=tRNA-Arg ##sequence-region DBLQKK010000017.1 1 41752 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000017.1 tpg region 1 41752 . + . ID=DBLQKK010000017.1:1..41752;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000017.1 tpg gene 16 1446 . + . ID=gene-ACYKJH_001231;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=ACYKJH_001231 DBLQKK010000017.1 Protein Homology CDS 16 1446 . + 0 ID=cds-HIH2189334.1;Parent=gene-ACYKJH_001231;Dbxref=NCBI_GP:HIH2189334.1;Name=HIH2189334.1;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344117.1;locus_tag=ACYKJH_001231;product=type I glutamate--ammonia ligase;protein_id=HIH2189334.1;transl_table=11 DBLQKK010000017.1 tpg gene 1513 2304 . - . ID=gene-ACYKJH_001232;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=ACYKJH_001232 DBLQKK010000017.1 Protein Homology CDS 1513 2304 . - 0 ID=cds-HIH2189335.1;Parent=gene-ACYKJH_001232;Dbxref=NCBI_GP:HIH2189335.1;Name=HIH2189335.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344116.1;locus_tag=ACYKJH_001232;product=flagellar basal-body rod protein FlgG;protein_id=HIH2189335.1;transl_table=11 DBLQKK010000017.1 tpg gene 2333 3145 . - . ID=gene-ACYKJH_001233;Name=ACYKJH_001233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001233 DBLQKK010000017.1 Protein Homology CDS 2333 3145 . - 0 ID=cds-HIH2189336.1;Parent=gene-ACYKJH_001233;Dbxref=NCBI_GP:HIH2189336.1;Name=HIH2189336.1;Ontology_term=GO:0071973,GO:0009425;gbkey=CDS;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344115.1;locus_tag=ACYKJH_001233;product=flagellar hook-basal body protein;protein_id=HIH2189336.1;transl_table=11 DBLQKK010000017.1 tpg gene 3301 4413 . - . ID=gene-ACYKJH_001234;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=ACYKJH_001234 DBLQKK010000017.1 Protein Homology CDS 3301 4413 . - 0 ID=cds-HIH2189337.1;Parent=gene-ACYKJH_001234;Dbxref=NCBI_GP:HIH2189337.1;Name=HIH2189337.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344114.1;locus_tag=ACYKJH_001234;product=cell division protein FtsZ;protein_id=HIH2189337.1;transl_table=11 DBLQKK010000017.1 tpg gene 4429 5817 . - . ID=gene-ACYKJH_001235;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=ACYKJH_001235 DBLQKK010000017.1 Protein Homology CDS 4429 5817 . - 0 ID=cds-HIH2189338.1;Parent=gene-ACYKJH_001235;Dbxref=NCBI_GP:HIH2189338.1;Name=HIH2189338.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344113.1;locus_tag=ACYKJH_001235;product=cell division protein FtsA;protein_id=HIH2189338.1;transl_table=11 DBLQKK010000017.1 tpg gene 5814 7304 . - . ID=gene-ACYKJH_001236;Name=ACYKJH_001236;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001236 DBLQKK010000017.1 Protein Homology CDS 5814 7304 . - 0 ID=cds-HIH2189339.1;Parent=gene-ACYKJH_001236;Dbxref=NCBI_GP:HIH2189339.1;Name=HIH2189339.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344112.1;locus_tag=ACYKJH_001236;product=peptidylprolyl isomerase;protein_id=HIH2189339.1;transl_table=11 DBLQKK010000017.1 tpg gene 7464 8402 . + . ID=gene-ACYKJH_001237;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=ACYKJH_001237 DBLQKK010000017.1 Protein Homology CDS 7464 8402 . + 0 ID=cds-HIH2189340.1;Parent=gene-ACYKJH_001237;Dbxref=NCBI_GP:HIH2189340.1;Name=HIH2189340.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344111.1;locus_tag=ACYKJH_001237;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=HIH2189340.1;transl_table=11 DBLQKK010000017.1 tpg gene 8402 9340 . + . ID=gene-ACYKJH_001238;Name=ACYKJH_001238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001238 DBLQKK010000017.1 Protein Homology CDS 8402 9340 . + 0 ID=cds-HIH2189341.1;Parent=gene-ACYKJH_001238;Dbxref=NCBI_GP:HIH2189341.1;Name=HIH2189341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344110.1;locus_tag=ACYKJH_001238;product=hypothetical protein;protein_id=HIH2189341.1;transl_table=11 DBLQKK010000017.1 tpg gene 9328 9819 . - . ID=gene-ACYKJH_001239;Name=ACYKJH_001239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001239 DBLQKK010000017.1 Protein Homology CDS 9328 9819 . - 0 ID=cds-HIH2189342.1;Parent=gene-ACYKJH_001239;Dbxref=NCBI_GP:HIH2189342.1;Name=HIH2189342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344109.1;locus_tag=ACYKJH_001239;product=hypothetical protein;protein_id=HIH2189342.1;transl_table=11 DBLQKK010000017.1 tpg gene 9969 13721 . + . ID=gene-ACYKJH_001240;Name=ACYKJH_001240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001240 DBLQKK010000017.1 Protein Homology CDS 9969 13721 . + 0 ID=cds-HIH2189343.1;Parent=gene-ACYKJH_001240;Dbxref=NCBI_GP:HIH2189343.1;Name=HIH2189343.1;Ontology_term=GO:0006304,GO:0003677,GO:0003824;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344108.1;locus_tag=ACYKJH_001240;product=Eco57I restriction-modification methylase domain-containing protein;protein_id=HIH2189343.1;transl_table=11 DBLQKK010000017.1 tpg gene 13749 14939 . - . ID=gene-ACYKJH_001241;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=ACYKJH_001241 DBLQKK010000017.1 Protein Homology CDS 13749 14939 . - 0 ID=cds-HIH2189344.1;Parent=gene-ACYKJH_001241;Dbxref=NCBI_GP:HIH2189344.1;Name=HIH2189344.1;Ontology_term=GO:0006085,GO:0016310,GO:0000287,GO:0005524,GO:0008776;gbkey=CDS;gene=ackA;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,acetate kinase activity|0008776||IEA;go_process=acetyl-CoA biosynthetic process|0006085||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344107.1;locus_tag=ACYKJH_001241;product=acetate kinase;protein_id=HIH2189344.1;transl_table=11 DBLQKK010000017.1 tpg gene 14953 16458 . - . ID=gene-ACYKJH_001242;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=ACYKJH_001242 DBLQKK010000017.1 Protein Homology CDS 14953 16458 . - 0 ID=cds-HIH2189345.1;Parent=gene-ACYKJH_001242;Dbxref=NCBI_GP:HIH2189345.1;Name=HIH2189345.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344106.1;locus_tag=ACYKJH_001242;product=phosphate acetyltransferase;protein_id=HIH2189345.1;transl_table=11 DBLQKK010000017.1 tpg gene 16548 17246 . + . ID=gene-ACYKJH_001243;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=ACYKJH_001243 DBLQKK010000017.1 Protein Homology CDS 16548 17246 . + 0 ID=cds-HIH2189346.1;Parent=gene-ACYKJH_001243;Dbxref=NCBI_GP:HIH2189346.1;Name=HIH2189346.1;gbkey=CDS;gene=flgH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344105.1;locus_tag=ACYKJH_001243;product=flagellar basal body L-ring protein FlgH;protein_id=HIH2189346.1;transl_table=11 DBLQKK010000017.1 tpg gene 17276 18349 . - . ID=gene-ACYKJH_001244;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=ACYKJH_001244 DBLQKK010000017.1 Protein Homology CDS 17276 18349 . - 0 ID=cds-HIH2189347.1;Parent=gene-ACYKJH_001244;Dbxref=NCBI_GP:HIH2189347.1;Name=HIH2189347.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344104.1;locus_tag=ACYKJH_001244;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=HIH2189347.1;transl_table=11 DBLQKK010000017.1 tpg pseudogene 18495 19890 . + . ID=gene-ACYKJH_001245;Name=cipA;gbkey=Gene;gene=cipA;gene_biotype=pseudogene;locus_tag=ACYKJH_001245;pseudo=true DBLQKK010000017.1 Protein Homology CDS 18495 19890 . + 0 ID=cds-ACYKJH_001245;Parent=gene-ACYKJH_001245;Note=frameshifted;gbkey=CDS;gene=cipA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019109180.1;locus_tag=ACYKJH_001245;product=DUF2972 domain-containing protein;pseudo=true;transl_table=11 DBLQKK010000017.1 tpg gene 19900 21753 . - . ID=gene-ACYKJH_001246;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=ACYKJH_001246 DBLQKK010000017.1 Protein Homology CDS 19900 21753 . - 0 ID=cds-HIH2189348.1;Parent=gene-ACYKJH_001246;Dbxref=NCBI_GP:HIH2189348.1;Name=HIH2189348.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=priA;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344102.1;locus_tag=ACYKJH_001246;product=primosomal protein N';protein_id=HIH2189348.1;transl_table=11 DBLQKK010000017.1 tpg gene 21735 22172 . - . ID=gene-ACYKJH_001247;Name=ACYKJH_001247;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001247 DBLQKK010000017.1 Protein Homology CDS 21735 22172 . - 0 ID=cds-HIH2189349.1;Parent=gene-ACYKJH_001247;Dbxref=NCBI_GP:HIH2189349.1;Name=HIH2189349.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02532.1;locus_tag=ACYKJH_001247;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=HIH2189349.1;transl_table=11 DBLQKK010000017.1 tpg gene 22169 22411 . - . ID=gene-ACYKJH_001248;Name=ACYKJH_001248;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001248 DBLQKK010000017.1 Protein Homology CDS 22169 22411 . - 0 ID=cds-HIH2189350.1;Parent=gene-ACYKJH_001248;Dbxref=NCBI_GP:HIH2189350.1;Name=HIH2189350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344100.1;locus_tag=ACYKJH_001248;product=hypothetical protein;protein_id=HIH2189350.1;transl_table=11 DBLQKK010000017.1 tpg gene 22401 22631 . - . ID=gene-ACYKJH_001249;Name=ACYKJH_001249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001249 DBLQKK010000017.1 Protein Homology CDS 22401 22631 . - 0 ID=cds-HIH2189351.1;Parent=gene-ACYKJH_001249;Dbxref=NCBI_GP:HIH2189351.1;Name=HIH2189351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344099.1;locus_tag=ACYKJH_001249;product=hypothetical protein;protein_id=HIH2189351.1;transl_table=11 DBLQKK010000017.1 tpg gene 22785 24758 . + . ID=gene-ACYKJH_001250;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=ACYKJH_001250 DBLQKK010000017.1 Protein Homology CDS 22785 24758 . + 0 ID=cds-HIH2189352.1;Parent=gene-ACYKJH_001250;Dbxref=NCBI_GP:HIH2189352.1;Name=HIH2189352.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344098.1;locus_tag=ACYKJH_001250;product=excinuclease ABC subunit UvrB;protein_id=HIH2189352.1;transl_table=11 DBLQKK010000017.1 tpg gene 24860 25501 . - . ID=gene-ACYKJH_001251;Name=ACYKJH_001251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001251 DBLQKK010000017.1 Protein Homology CDS 24860 25501 . - 0 ID=cds-HIH2189353.1;Parent=gene-ACYKJH_001251;Dbxref=NCBI_GP:HIH2189353.1;Name=HIH2189353.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024884.6;locus_tag=ACYKJH_001251;product=DUF4118 domain-containing protein;protein_id=HIH2189353.1;transl_table=11 DBLQKK010000017.1 tpg gene 25525 26676 . - . ID=gene-ACYKJH_001252;Name=ACYKJH_001252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001252 DBLQKK010000017.1 Protein Homology CDS 25525 26676 . - 0 ID=cds-HIH2189354.1;Parent=gene-ACYKJH_001252;Dbxref=NCBI_GP:HIH2189354.1;Name=HIH2189354.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014728.6;locus_tag=ACYKJH_001252;product=sensor histidine kinase KdpD;protein_id=HIH2189354.1;transl_table=11 DBLQKK010000017.1 tpg gene 26679 27287 . - . ID=gene-ACYKJH_001253;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=ACYKJH_001253 DBLQKK010000017.1 Protein Homology CDS 26679 27287 . - 0 ID=cds-HIH2189355.1;Parent=gene-ACYKJH_001253;Dbxref=NCBI_GP:HIH2189355.1;Name=HIH2189355.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002861367.1;locus_tag=ACYKJH_001253;product=potassium-transporting ATPase subunit KdpC;protein_id=HIH2189355.1;transl_table=11 DBLQKK010000017.1 tpg pseudogene 27289 29337 . - . ID=gene-ACYKJH_001254;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=pseudogene;locus_tag=ACYKJH_001254;pseudo=true DBLQKK010000017.1 Protein Homology CDS 27289 29337 . - 0 ID=cds-ACYKJH_001254;Parent=gene-ACYKJH_001254;Note=frameshifted%3B internal stop;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344096.1;locus_tag=ACYKJH_001254;product=potassium-transporting ATPase subunit KdpB;pseudo=true;transl_table=11 DBLQKK010000017.1 tpg gene 29347 30330 . - . ID=gene-ACYKJH_001255;Name=ACYKJH_001255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001255 DBLQKK010000017.1 Protein Homology CDS 29347 30330 . - 0 ID=cds-HIH2189356.1;Parent=gene-ACYKJH_001255;Dbxref=NCBI_GP:HIH2189356.1;Name=HIH2189356.1;Ontology_term=GO:0006813,GO:0008556;gbkey=CDS;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: protein motif:HMM:NF015753.6;locus_tag=ACYKJH_001255;product=potassium-transporting ATPase subunit KdpA;protein_id=HIH2189356.1;transl_table=11 DBLQKK010000017.1 tpg pseudogene 30276 30833 . - . ID=gene-ACYKJH_001256;Name=ACYKJH_001256;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001256;pseudo=true DBLQKK010000017.1 Protein Homology CDS 30276 30833 . - 0 ID=cds-ACYKJH_001256;Parent=gene-ACYKJH_001256;Note=internal stop;Ontology_term=GO:0006813,GO:0008556;gbkey=CDS;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: protein motif:HMM:NF015753.6;locus_tag=ACYKJH_001256;product=potassium-transporting ATPase subunit KdpA;pseudo=true;transl_table=11 DBLQKK010000017.1 tpg gene 30841 31044 . - . ID=gene-ACYKJH_001257;Name=ACYKJH_001257;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001257 DBLQKK010000017.1 Protein Homology CDS 30841 31044 . - 0 ID=cds-HIH2189357.1;Parent=gene-ACYKJH_001257;Dbxref=NCBI_GP:HIH2189357.1;Name=HIH2189357.1;Ontology_term=GO:0006813,GO:0008556;gbkey=CDS;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: protein motif:HMM:NF015753.6;locus_tag=ACYKJH_001257;product=potassium-transporting ATPase subunit KdpA;protein_id=HIH2189357.1;transl_table=11 DBLQKK010000017.1 tpg pseudogene 31054 31241 . - . ID=gene-ACYKJH_001258;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=pseudogene;locus_tag=ACYKJH_001258;pseudo=true DBLQKK010000017.1 Protein Homology CDS 31054 31241 . - 0 ID=cds-ACYKJH_001258;Parent=gene-ACYKJH_001258;Note=frameshifted;Ontology_term=GO:0006813,GO:0043462,GO:0031004;gbkey=CDS;gene=kdpF;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_process=potassium ion transport|0006813||IEA,regulation of ATP-dependent activity|0043462||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344095.1;locus_tag=ACYKJH_001258;product=K(+)-transporting ATPase subunit F;pseudo=true;transl_table=11 DBLQKK010000017.1 tpg gene 31383 32807 . - . ID=gene-ACYKJH_001259;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=ACYKJH_001259 DBLQKK010000017.1 Protein Homology CDS 31383 32807 . - 0 ID=cds-HIH2189358.1;Parent=gene-ACYKJH_001259;Dbxref=NCBI_GP:HIH2189358.1;Name=HIH2189358.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344094.1;locus_tag=ACYKJH_001259;product=anaerobic C4-dicarboxylate transporter;protein_id=HIH2189358.1;transl_table=11 DBLQKK010000017.1 tpg gene 32971 34221 . - . ID=gene-ACYKJH_001260;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=ACYKJH_001260 DBLQKK010000017.1 Protein Homology CDS 32971 34221 . - 0 ID=cds-HIH2189359.1;Parent=gene-ACYKJH_001260;Dbxref=NCBI_GP:HIH2189359.1;Name=HIH2189359.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344093.1;locus_tag=ACYKJH_001260;product=RNA polymerase factor sigma-54;protein_id=HIH2189359.1;transl_table=11 DBLQKK010000017.1 tpg gene 34221 34949 . - . ID=gene-ACYKJH_001261;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=ACYKJH_001261 DBLQKK010000017.1 Protein Homology CDS 34221 34949 . - 0 ID=cds-HIH2189360.1;Parent=gene-ACYKJH_001261;Dbxref=NCBI_GP:HIH2189360.1;Name=HIH2189360.1;Ontology_term=GO:0015920,GO:0015221,GO:0042626,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344092.1;locus_tag=ACYKJH_001261;product=LPS export ABC transporter ATP-binding protein;protein_id=HIH2189360.1;transl_table=11 DBLQKK010000017.1 tpg gene 34942 35349 . - . ID=gene-ACYKJH_001262;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=ACYKJH_001262 DBLQKK010000017.1 Protein Homology CDS 34942 35349 . - 0 ID=cds-HIH2189361.1;Parent=gene-ACYKJH_001262;Dbxref=NCBI_GP:HIH2189361.1;Name=HIH2189361.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344091.1;locus_tag=ACYKJH_001262;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=HIH2189361.1;transl_table=11 DBLQKK010000017.1 tpg gene 35346 35591 . - . ID=gene-ACYKJH_001263;Name=ACYKJH_001263;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001263 DBLQKK010000017.1 Protein Homology CDS 35346 35591 . - 0 ID=cds-HIH2189362.1;Parent=gene-ACYKJH_001263;Dbxref=NCBI_GP:HIH2189362.1;Name=HIH2189362.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344090.1;locus_tag=ACYKJH_001263;product=RNA-binding S4 domain-containing protein;protein_id=HIH2189362.1;transl_table=11 DBLQKK010000017.1 tpg gene 35746 36966 . + . ID=gene-ACYKJH_001264;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=ACYKJH_001264 DBLQKK010000017.1 Protein Homology CDS 35746 36966 . + 0 ID=cds-HIH2189363.1;Parent=gene-ACYKJH_001264;Dbxref=NCBI_GP:HIH2189363.1;Name=HIH2189363.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344089.1;locus_tag=ACYKJH_001264;product=argininosuccinate synthase;protein_id=HIH2189363.1;transl_table=11 DBLQKK010000017.1 tpg gene 36979 37422 . + . ID=gene-ACYKJH_001265;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=ACYKJH_001265 DBLQKK010000017.1 Protein Homology CDS 36979 37422 . + 0 ID=cds-HIH2189364.1;Parent=gene-ACYKJH_001265;Dbxref=NCBI_GP:HIH2189364.1;Name=HIH2189364.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344088.1;locus_tag=ACYKJH_001265;product=50S ribosomal protein L9;protein_id=HIH2189364.1;transl_table=11 DBLQKK010000017.1 tpg gene 37422 37964 . + . ID=gene-ACYKJH_001266;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=ACYKJH_001266 DBLQKK010000017.1 Protein Homology CDS 37422 37964 . + 0 ID=cds-HIH2189365.1;Parent=gene-ACYKJH_001266;Dbxref=NCBI_GP:HIH2189365.1;Name=HIH2189365.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344087.1;locus_tag=ACYKJH_001266;product=ATP-dependent protease subunit HslV;protein_id=HIH2189365.1;transl_table=11 DBLQKK010000017.1 tpg gene 37961 39280 . + . ID=gene-ACYKJH_001267;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=ACYKJH_001267 DBLQKK010000017.1 Protein Homology CDS 37961 39280 . + 0 ID=cds-HIH2189366.1;Parent=gene-ACYKJH_001267;Dbxref=NCBI_GP:HIH2189366.1;Name=HIH2189366.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344086.1;locus_tag=ACYKJH_001267;product=ATP-dependent protease ATPase subunit HslU;protein_id=HIH2189366.1;transl_table=11 DBLQKK010000017.1 tpg gene 39277 40152 . + . ID=gene-ACYKJH_001268;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=ACYKJH_001268 DBLQKK010000017.1 Protein Homology CDS 39277 40152 . + 0 ID=cds-HIH2189367.1;Parent=gene-ACYKJH_001268;Dbxref=NCBI_GP:HIH2189367.1;Name=HIH2189367.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344085.1;locus_tag=ACYKJH_001268;product=GTPase Era;protein_id=HIH2189367.1;transl_table=11 DBLQKK010000017.1 tpg gene 40139 41245 . + . ID=gene-ACYKJH_001269;Name=ACYKJH_001269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001269 DBLQKK010000017.1 Protein Homology CDS 40139 41245 . + 0 ID=cds-HIH2189368.1;Parent=gene-ACYKJH_001269;Dbxref=NCBI_GP:HIH2189368.1;Name=HIH2189368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344084.1;locus_tag=ACYKJH_001269;product=hypothetical protein;protein_id=HIH2189368.1;transl_table=11 DBLQKK010000017.1 tpg gene 41238 41752 . + . ID=gene-ACYKJH_001270;Name=ACYKJH_001270;end_range=41752,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001270;partial=true DBLQKK010000017.1 Protein Homology CDS 41238 41752 . + 0 ID=cds-HIH2189369.1;Parent=gene-ACYKJH_001270;Dbxref=NCBI_GP:HIH2189369.1;Name=HIH2189369.1;end_range=41752,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344083.1;locus_tag=ACYKJH_001270;partial=true;product=hypothetical protein;protein_id=HIH2189369.1;transl_table=11 ##sequence-region DBLQKK010000018.1 1 40144 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000018.1 tpg region 1 40144 . + . ID=DBLQKK010000018.1:1..40144;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000018.1 tpg gene 33 458 . + . ID=gene-ACYKJH_001271;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=ACYKJH_001271 DBLQKK010000018.1 Protein Homology CDS 33 458 . + 0 ID=cds-HIH2189370.1;Parent=gene-ACYKJH_001271;Dbxref=NCBI_GP:HIH2189370.1;Name=HIH2189370.1;Ontology_term=GO:0055085,GO:0015078,GO:0016020;gbkey=CDS;gene=exbB;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344997.1;locus_tag=ACYKJH_001271;product=TonB-system energizer ExbB;protein_id=HIH2189370.1;transl_table=11 DBLQKK010000018.1 tpg gene 451 840 . + . ID=gene-ACYKJH_001272;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=ACYKJH_001272 DBLQKK010000018.1 Protein Homology CDS 451 840 . + 0 ID=cds-HIH2189371.1;Parent=gene-ACYKJH_001272;Dbxref=NCBI_GP:HIH2189371.1;Name=HIH2189371.1;Ontology_term=GO:0006810,GO:0015291,GO:0016020;gbkey=CDS;gene=exbD;go_component=membrane|0016020||IEA;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344998.1;locus_tag=ACYKJH_001272;product=TonB system transport protein ExbD;protein_id=HIH2189371.1;transl_table=11 DBLQKK010000018.1 tpg pseudogene 837 1518 . + . ID=gene-ACYKJH_001273;Name=ACYKJH_001273;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001273;pseudo=true DBLQKK010000018.1 Protein Homology CDS 837 1518 . + 0 ID=cds-ACYKJH_001273;Parent=gene-ACYKJH_001273;Note=frameshifted;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344999.1;locus_tag=ACYKJH_001273;product=TonB family protein;pseudo=true;transl_table=11 DBLQKK010000018.1 tpg gene 1531 2400 . - . ID=gene-ACYKJH_001274;Name=ACYKJH_001274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001274 DBLQKK010000018.1 Protein Homology CDS 1531 2400 . - 0 ID=cds-HIH2189372.1;Parent=gene-ACYKJH_001274;Dbxref=NCBI_GP:HIH2189372.1;Name=HIH2189372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345000.1;locus_tag=ACYKJH_001274;product=hypothetical protein;protein_id=HIH2189372.1;transl_table=11 DBLQKK010000018.1 tpg gene 2404 2565 . - . ID=gene-ACYKJH_001275;Name=ACYKJH_001275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001275 DBLQKK010000018.1 Protein Homology CDS 2404 2565 . - 0 ID=cds-HIH2189373.1;Parent=gene-ACYKJH_001275;Dbxref=NCBI_GP:HIH2189373.1;Name=HIH2189373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345001.1;locus_tag=ACYKJH_001275;product=hypothetical protein;protein_id=HIH2189373.1;transl_table=11 DBLQKK010000018.1 tpg gene 2660 3643 . + . ID=gene-ACYKJH_001276;Name=ACYKJH_001276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001276 DBLQKK010000018.1 Protein Homology CDS 2660 3643 . + 0 ID=cds-HIH2189374.1;Parent=gene-ACYKJH_001276;Dbxref=NCBI_GP:HIH2189374.1;Name=HIH2189374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345002.1;locus_tag=ACYKJH_001276;product=ATP-binding protein;protein_id=HIH2189374.1;transl_table=11 DBLQKK010000018.1 tpg gene 3729 4817 . - . ID=gene-ACYKJH_001277;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=ACYKJH_001277 DBLQKK010000018.1 Protein Homology CDS 3729 4817 . - 0 ID=cds-HIH2189375.1;Parent=gene-ACYKJH_001277;Dbxref=NCBI_GP:HIH2189375.1;Name=HIH2189375.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345003.1;locus_tag=ACYKJH_001277;product=chorismate synthase;protein_id=HIH2189375.1;transl_table=11 DBLQKK010000018.1 tpg gene 4817 5491 . - . ID=gene-ACYKJH_001278;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=ACYKJH_001278 DBLQKK010000018.1 Protein Homology CDS 4817 5491 . - 0 ID=cds-HIH2189376.1;Parent=gene-ACYKJH_001278;Dbxref=NCBI_GP:HIH2189376.1;Name=HIH2189376.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345004.1;locus_tag=ACYKJH_001278;product=ribonuclease III;protein_id=HIH2189376.1;transl_table=11 DBLQKK010000018.1 tpg gene 5478 5918 . - . ID=gene-ACYKJH_001279;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=ACYKJH_001279 DBLQKK010000018.1 Protein Homology CDS 5478 5918 . - 0 ID=cds-HIH2189377.1;Parent=gene-ACYKJH_001279;Dbxref=NCBI_GP:HIH2189377.1;Name=HIH2189377.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345005.1;locus_tag=ACYKJH_001279;product=ribonuclease HI;protein_id=HIH2189377.1;transl_table=11 DBLQKK010000018.1 tpg gene 5905 6891 . - . ID=gene-ACYKJH_001280;Name=ACYKJH_001280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001280 DBLQKK010000018.1 Protein Homology CDS 5905 6891 . - 0 ID=cds-HIH2189378.1;Parent=gene-ACYKJH_001280;Dbxref=NCBI_GP:HIH2189378.1;Name=HIH2189378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345006.1;locus_tag=ACYKJH_001280;product=CDC27 family protein;protein_id=HIH2189378.1;transl_table=11 DBLQKK010000018.1 tpg gene 6961 8778 . + . ID=gene-ACYKJH_001281;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=ACYKJH_001281 DBLQKK010000018.1 Protein Homology CDS 6961 8778 . + 0 ID=cds-HIH2189379.1;Parent=gene-ACYKJH_001281;Dbxref=NCBI_GP:HIH2189379.1;Name=HIH2189379.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345007.1;locus_tag=ACYKJH_001281;product=DNA primase;protein_id=HIH2189379.1;transl_table=11 DBLQKK010000018.1 tpg gene 8860 9132 . + . ID=gene-ACYKJH_001282;Name=ACYKJH_001282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001282 DBLQKK010000018.1 Protein Homology CDS 8860 9132 . + 0 ID=cds-HIH2189380.1;Parent=gene-ACYKJH_001282;Dbxref=NCBI_GP:HIH2189380.1;Name=HIH2189380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345008.1;locus_tag=ACYKJH_001282;product=NifU family protein;protein_id=HIH2189380.1;transl_table=11 DBLQKK010000018.1 tpg gene 9119 9682 . + . ID=gene-ACYKJH_001283;Name=ACYKJH_001283;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001283 DBLQKK010000018.1 Protein Homology CDS 9119 9682 . + 0 ID=cds-HIH2189381.1;Parent=gene-ACYKJH_001283;Dbxref=NCBI_GP:HIH2189381.1;Name=HIH2189381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345009.1;locus_tag=ACYKJH_001283;product=histidine kinase;protein_id=HIH2189381.1;transl_table=11 DBLQKK010000018.1 tpg gene 9666 10949 . + . ID=gene-ACYKJH_001284;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=ACYKJH_001284 DBLQKK010000018.1 Protein Homology CDS 9666 10949 . + 0 ID=cds-HIH2189382.1;Parent=gene-ACYKJH_001284;Dbxref=NCBI_GP:HIH2189382.1;Name=HIH2189382.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016874;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345010.1;locus_tag=ACYKJH_001284;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=HIH2189382.1;transl_table=11 DBLQKK010000018.1 tpg gene 10953 11264 . + . ID=gene-ACYKJH_001285;Name=ACYKJH_001285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001285 DBLQKK010000018.1 Protein Homology CDS 10953 11264 . + 0 ID=cds-HIH2189383.1;Parent=gene-ACYKJH_001285;Dbxref=NCBI_GP:HIH2189383.1;Name=HIH2189383.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345011.1;locus_tag=ACYKJH_001285;product=YbaB/EbfC family nucleoid-associated protein;protein_id=HIH2189383.1;transl_table=11 DBLQKK010000018.1 tpg gene 11261 12355 . + . ID=gene-ACYKJH_001286;Name=ACYKJH_001286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001286 DBLQKK010000018.1 Protein Homology CDS 11261 12355 . + 0 ID=cds-HIH2189384.1;Parent=gene-ACYKJH_001286;Dbxref=NCBI_GP:HIH2189384.1;Name=HIH2189384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345012.1;locus_tag=ACYKJH_001286;product=DUF7488 domain-containing protein;protein_id=HIH2189384.1;transl_table=11 DBLQKK010000018.1 tpg gene 12352 13197 . + . ID=gene-ACYKJH_001287;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=ACYKJH_001287 DBLQKK010000018.1 Protein Homology CDS 12352 13197 . + 0 ID=cds-HIH2189385.1;Parent=gene-ACYKJH_001287;Dbxref=NCBI_GP:HIH2189385.1;Name=HIH2189385.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;gene=ispA;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345013.1;locus_tag=ACYKJH_001287;product=polyprenyl synthetase family protein;protein_id=HIH2189385.1;transl_table=11 DBLQKK010000018.1 tpg gene 13207 15105 . + . ID=gene-ACYKJH_001288;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=ACYKJH_001288 DBLQKK010000018.1 Protein Homology CDS 13207 15105 . + 0 ID=cds-HIH2189386.1;Parent=gene-ACYKJH_001288;Dbxref=NCBI_GP:HIH2189386.1;Name=HIH2189386.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345014.1;locus_tag=ACYKJH_001288;product=transketolase;protein_id=HIH2189386.1;transl_table=11 DBLQKK010000018.1 tpg gene 15107 16216 . + . ID=gene-ACYKJH_001289;Name=iamB;gbkey=Gene;gene=iamB;gene_biotype=protein_coding;locus_tag=ACYKJH_001289 DBLQKK010000018.1 Protein Homology CDS 15107 16216 . + 0 ID=cds-HIH2189387.1;Parent=gene-ACYKJH_001289;Dbxref=NCBI_GP:HIH2189387.1;Name=HIH2189387.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;gene=iamB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345015.1;locus_tag=ACYKJH_001289;product=ABC transporter permease;protein_id=HIH2189387.1;transl_table=11 DBLQKK010000018.1 tpg gene 16217 16939 . + . ID=gene-ACYKJH_001290;Name=iamA;gbkey=Gene;gene=iamA;gene_biotype=protein_coding;locus_tag=ACYKJH_001290 DBLQKK010000018.1 Protein Homology CDS 16217 16939 . + 0 ID=cds-HIH2189388.1;Parent=gene-ACYKJH_001290;Dbxref=NCBI_GP:HIH2189388.1;Name=HIH2189388.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=iamA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345016.1;locus_tag=ACYKJH_001290;product=ABC transporter ATP-binding protein;protein_id=HIH2189388.1;transl_table=11 DBLQKK010000018.1 tpg gene 16942 17832 . + . ID=gene-ACYKJH_001291;Name=ACYKJH_001291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001291 DBLQKK010000018.1 Protein Homology CDS 16942 17832 . + 0 ID=cds-HIH2189389.1;Parent=gene-ACYKJH_001291;Dbxref=NCBI_GP:HIH2189389.1;Name=HIH2189389.1;Ontology_term=GO:0015914;gbkey=CDS;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345017.1;locus_tag=ACYKJH_001291;product=MlaD family protein;protein_id=HIH2189389.1;transl_table=11 DBLQKK010000018.1 tpg gene 17832 18431 . + . ID=gene-ACYKJH_001292;Name=ACYKJH_001292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001292 DBLQKK010000018.1 Protein Homology CDS 17832 18431 . + 0 ID=cds-HIH2189390.1;Parent=gene-ACYKJH_001292;Dbxref=NCBI_GP:HIH2189390.1;Name=HIH2189390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345018.1;locus_tag=ACYKJH_001292;product=ABC-type transport auxiliary lipoprotein family protein;protein_id=HIH2189390.1;transl_table=11 DBLQKK010000018.1 tpg gene 18487 18987 . + . ID=gene-ACYKJH_001293;Name=ACYKJH_001293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001293 DBLQKK010000018.1 Protein Homology CDS 18487 18987 . + 0 ID=cds-HIH2189391.1;Parent=gene-ACYKJH_001293;Dbxref=NCBI_GP:HIH2189391.1;Name=HIH2189391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345019.1;locus_tag=ACYKJH_001293;product=flagellar FLiS export co-chaperone;protein_id=HIH2189391.1;transl_table=11 DBLQKK010000018.1 tpg gene 19356 20114 . - . ID=gene-ACYKJH_001294;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=ACYKJH_001294 DBLQKK010000018.1 Protein Homology CDS 19356 20114 . - 0 ID=cds-HIH2189392.1;Parent=gene-ACYKJH_001294;Dbxref=NCBI_GP:HIH2189392.1;Name=HIH2189392.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345020.1;locus_tag=ACYKJH_001294;product=type I methionyl aminopeptidase;protein_id=HIH2189392.1;transl_table=11 DBLQKK010000018.1 tpg gene 20116 20868 . - . ID=gene-ACYKJH_001295;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=ACYKJH_001295 DBLQKK010000018.1 Protein Homology CDS 20116 20868 . - 0 ID=cds-HIH2189393.1;Parent=gene-ACYKJH_001295;Dbxref=NCBI_GP:HIH2189393.1;Name=HIH2189393.1;Ontology_term=GO:0009252,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345021.1;locus_tag=ACYKJH_001295;product=glutamate racemase;protein_id=HIH2189393.1;transl_table=11 DBLQKK010000018.1 tpg gene 20870 21328 . - . ID=gene-ACYKJH_001296;Name=ACYKJH_001296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001296 DBLQKK010000018.1 Protein Homology CDS 20870 21328 . - 0 ID=cds-HIH2189394.1;Parent=gene-ACYKJH_001296;Dbxref=NCBI_GP:HIH2189394.1;Name=HIH2189394.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345022.1;locus_tag=ACYKJH_001296;product=C40 family peptidase;protein_id=HIH2189394.1;transl_table=11 DBLQKK010000018.1 tpg gene 21337 22506 . - . ID=gene-ACYKJH_001297;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=ACYKJH_001297 DBLQKK010000018.1 Protein Homology CDS 21337 22506 . - 0 ID=cds-HIH2189395.1;Parent=gene-ACYKJH_001297;Dbxref=NCBI_GP:HIH2189395.1;Name=HIH2189395.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345023.1;locus_tag=ACYKJH_001297;product=Na+/H+ antiporter NhaA;protein_id=HIH2189395.1;transl_table=11 DBLQKK010000018.1 tpg gene 22503 23651 . - . ID=gene-ACYKJH_001298;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=ACYKJH_001298 DBLQKK010000018.1 Protein Homology CDS 22503 23651 . - 0 ID=cds-HIH2189396.1;Parent=gene-ACYKJH_001298;Dbxref=NCBI_GP:HIH2189396.1;Name=HIH2189396.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345024.1;locus_tag=ACYKJH_001298;product=Na+/H+ antiporter NhaA;protein_id=HIH2189396.1;transl_table=11 DBLQKK010000018.1 tpg gene 23794 23976 . - . ID=gene-ACYKJH_001299;Name=ACYKJH_001299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001299 DBLQKK010000018.1 Protein Homology CDS 23794 23976 . - 0 ID=cds-HIH2189397.1;Parent=gene-ACYKJH_001299;Dbxref=NCBI_GP:HIH2189397.1;Name=HIH2189397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345025.1;locus_tag=ACYKJH_001299;product=YjfB family protein;protein_id=HIH2189397.1;transl_table=11 DBLQKK010000018.1 tpg pseudogene 24299 24501 . + . ID=gene-ACYKJH_001300;Name=ACYKJH_001300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001300;pseudo=true DBLQKK010000018.1 Protein Homology CDS 24299 24501 . + 0 ID=cds-ACYKJH_001300;Parent=gene-ACYKJH_001300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002866842.1;locus_tag=ACYKJH_001300;product=hypothetical protein;pseudo=true;transl_table=11 DBLQKK010000018.1 tpg gene 24854 26944 . + . ID=gene-ACYKJH_001301;Name=ACYKJH_001301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001301 DBLQKK010000018.1 Protein Homology CDS 24854 26944 . + 0 ID=cds-HIH2189398.1;Parent=gene-ACYKJH_001301;Dbxref=NCBI_GP:HIH2189398.1;Name=HIH2189398.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345026.1;locus_tag=ACYKJH_001301;product=FTR1 family iron permease;protein_id=HIH2189398.1;transl_table=11 DBLQKK010000018.1 tpg gene 26941 27480 . + . ID=gene-ACYKJH_001302;Name=ACYKJH_001302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001302 DBLQKK010000018.1 Protein Homology CDS 26941 27480 . + 0 ID=cds-HIH2189399.1;Parent=gene-ACYKJH_001302;Dbxref=NCBI_GP:HIH2189399.1;Name=HIH2189399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345027.1;locus_tag=ACYKJH_001302;product=iron transporter;protein_id=HIH2189399.1;transl_table=11 DBLQKK010000018.1 tpg gene 27563 28966 . + . ID=gene-ACYKJH_001303;Name=ACYKJH_001303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001303 DBLQKK010000018.1 Protein Homology CDS 27563 28966 . + 0 ID=cds-HIH2189400.1;Parent=gene-ACYKJH_001303;Dbxref=NCBI_GP:HIH2189400.1;Name=HIH2189400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345028.1;locus_tag=ACYKJH_001303;product=Fe-S-containing protein;protein_id=HIH2189400.1;transl_table=11 DBLQKK010000018.1 tpg gene 28953 30245 . + . ID=gene-ACYKJH_001304;Name=ACYKJH_001304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001304 DBLQKK010000018.1 Protein Homology CDS 28953 30245 . + 0 ID=cds-HIH2189401.1;Parent=gene-ACYKJH_001304;Dbxref=NCBI_GP:HIH2189401.1;Name=HIH2189401.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345029.1;locus_tag=ACYKJH_001304;product=ABC transporter permease;protein_id=HIH2189401.1;transl_table=11 DBLQKK010000018.1 tpg gene 30235 31353 . + . ID=gene-ACYKJH_001305;Name=ACYKJH_001305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001305 DBLQKK010000018.1 Protein Homology CDS 30235 31353 . + 0 ID=cds-HIH2189402.1;Parent=gene-ACYKJH_001305;Dbxref=NCBI_GP:HIH2189402.1;Name=HIH2189402.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345030.1;locus_tag=ACYKJH_001305;product=ABC transporter permease;protein_id=HIH2189402.1;transl_table=11 DBLQKK010000018.1 tpg gene 31350 32003 . + . ID=gene-ACYKJH_001306;Name=ACYKJH_001306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001306 DBLQKK010000018.1 Protein Homology CDS 31350 32003 . + 0 ID=cds-HIH2189403.1;Parent=gene-ACYKJH_001306;Dbxref=NCBI_GP:HIH2189403.1;Name=HIH2189403.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345031.1;locus_tag=ACYKJH_001306;product=ABC transporter ATP-binding protein;protein_id=HIH2189403.1;transl_table=11 DBLQKK010000018.1 tpg gene 32000 32488 . + . ID=gene-ACYKJH_001307;Name=ACYKJH_001307;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001307 DBLQKK010000018.1 Protein Homology CDS 32000 32488 . + 0 ID=cds-HIH2189404.1;Parent=gene-ACYKJH_001307;Dbxref=NCBI_GP:HIH2189404.1;Name=HIH2189404.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345032.1;locus_tag=ACYKJH_001307;product=TlpA family protein disulfide reductase;protein_id=HIH2189404.1;transl_table=11 DBLQKK010000018.1 tpg gene 32449 32952 . + . ID=gene-ACYKJH_001308;Name=ACYKJH_001308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001308 DBLQKK010000018.1 Protein Homology CDS 32449 32952 . + 0 ID=cds-HIH2189405.1;Parent=gene-ACYKJH_001308;Dbxref=NCBI_GP:HIH2189405.1;Name=HIH2189405.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345033.1;locus_tag=ACYKJH_001308;product=TlpA family protein disulfide reductase;protein_id=HIH2189405.1;transl_table=11 DBLQKK010000018.1 tpg gene 32962 33399 . - . ID=gene-ACYKJH_001309;Name=ACYKJH_001309;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001309 DBLQKK010000018.1 Protein Homology CDS 32962 33399 . - 0 ID=cds-HIH2189406.1;Parent=gene-ACYKJH_001309;Dbxref=NCBI_GP:HIH2189406.1;Name=HIH2189406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345034.1;locus_tag=ACYKJH_001309;product=DUF411 domain-containing protein;protein_id=HIH2189406.1;transl_table=11 DBLQKK010000018.1 tpg gene 33697 34113 . - . ID=gene-ACYKJH_001310;Name=ACYKJH_001310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001310 DBLQKK010000018.1 Protein Homology CDS 33697 34113 . - 0 ID=cds-HIH2189407.1;Parent=gene-ACYKJH_001310;Dbxref=NCBI_GP:HIH2189407.1;Name=HIH2189407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345036.1;locus_tag=ACYKJH_001310;product=hypothetical protein;protein_id=HIH2189407.1;transl_table=11 DBLQKK010000018.1 tpg gene 34649 34936 . - . ID=gene-ACYKJH_001311;Name=ACYKJH_001311;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001311 DBLQKK010000018.1 Protein Homology CDS 34649 34936 . - 0 ID=cds-HIH2189408.1;Parent=gene-ACYKJH_001311;Dbxref=NCBI_GP:HIH2189408.1;Name=HIH2189408.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002926587.1;locus_tag=ACYKJH_001311;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=HIH2189408.1;transl_table=11 DBLQKK010000018.1 tpg gene 34936 35166 . - . ID=gene-ACYKJH_001312;Name=ACYKJH_001312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001312 DBLQKK010000018.1 GeneMarkS-2+ CDS 34936 35166 . - 0 ID=cds-HIH2189409.1;Parent=gene-ACYKJH_001312;Dbxref=NCBI_GP:HIH2189409.1;Name=HIH2189409.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_001312;product=hypothetical protein;protein_id=HIH2189409.1;transl_table=11 DBLQKK010000018.1 tpg gene 35606 35974 . - . ID=gene-ACYKJH_001313;Name=ACYKJH_001313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001313 DBLQKK010000018.1 GeneMarkS-2+ CDS 35606 35974 . - 0 ID=cds-HIH2189410.1;Parent=gene-ACYKJH_001313;Dbxref=NCBI_GP:HIH2189410.1;Name=HIH2189410.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_001313;product=hypothetical protein;protein_id=HIH2189410.1;transl_table=11 DBLQKK010000018.1 tpg gene 36114 36341 . + . ID=gene-ACYKJH_001314;Name=ACYKJH_001314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001314 DBLQKK010000018.1 Protein Homology CDS 36114 36341 . + 0 ID=cds-HIH2189411.1;Parent=gene-ACYKJH_001314;Dbxref=NCBI_GP:HIH2189411.1;Name=HIH2189411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002870305.1;locus_tag=ACYKJH_001314;product=hypothetical protein;protein_id=HIH2189411.1;transl_table=11 DBLQKK010000018.1 tpg gene 36593 36799 . + . ID=gene-ACYKJH_001315;Name=ACYKJH_001315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001315 DBLQKK010000018.1 Protein Homology CDS 36593 36799 . + 0 ID=cds-HIH2189412.1;Parent=gene-ACYKJH_001315;Dbxref=NCBI_GP:HIH2189412.1;Name=HIH2189412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002899137.1;locus_tag=ACYKJH_001315;product=XRE family transcriptional regulator;protein_id=HIH2189412.1;transl_table=11 DBLQKK010000018.1 tpg gene 37235 38272 . - . ID=gene-ACYKJH_001316;Name=ACYKJH_001316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001316 DBLQKK010000018.1 Protein Homology CDS 37235 38272 . - 0 ID=cds-HIH2189413.1;Parent=gene-ACYKJH_001316;Dbxref=NCBI_GP:HIH2189413.1;Name=HIH2189413.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024872.6;locus_tag=ACYKJH_001316;product=AAA family ATPase;protein_id=HIH2189413.1;transl_table=11 DBLQKK010000018.1 tpg gene 38269 38949 . - . ID=gene-ACYKJH_001317;Name=ACYKJH_001317;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001317 DBLQKK010000018.1 Protein Homology CDS 38269 38949 . - 0 ID=cds-HIH2189414.1;Parent=gene-ACYKJH_001317;Dbxref=NCBI_GP:HIH2189414.1;Name=HIH2189414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002888671.1;locus_tag=ACYKJH_001317;product=hypothetical protein;protein_id=HIH2189414.1;transl_table=11 DBLQKK010000018.1 tpg gene 39015 39383 . - . ID=gene-ACYKJH_001318;Name=ACYKJH_001318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001318 DBLQKK010000018.1 GeneMarkS-2+ CDS 39015 39383 . - 0 ID=cds-HIH2189415.1;Parent=gene-ACYKJH_001318;Dbxref=NCBI_GP:HIH2189415.1;Name=HIH2189415.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_001318;product=hypothetical protein;protein_id=HIH2189415.1;transl_table=11 DBLQKK010000018.1 tpg gene 39385 39678 . - . ID=gene-ACYKJH_001319;Name=ACYKJH_001319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001319 DBLQKK010000018.1 Protein Homology CDS 39385 39678 . - 0 ID=cds-HIH2189416.1;Parent=gene-ACYKJH_001319;Dbxref=NCBI_GP:HIH2189416.1;Name=HIH2189416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002888674.1;locus_tag=ACYKJH_001319;product=hypothetical protein;protein_id=HIH2189416.1;transl_table=11 DBLQKK010000018.1 tpg gene 39689 39871 . - . ID=gene-ACYKJH_001320;Name=ACYKJH_001320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001320 DBLQKK010000018.1 Protein Homology CDS 39689 39871 . - 0 ID=cds-HIH2189417.1;Parent=gene-ACYKJH_001320;Dbxref=NCBI_GP:HIH2189417.1;Name=HIH2189417.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002869698.1;locus_tag=ACYKJH_001320;product=helix-turn-helix domain-containing protein;protein_id=HIH2189417.1;transl_table=11 ##sequence-region DBLQKK010000019.1 1 35273 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000019.1 tpg region 1 35273 . + . ID=DBLQKK010000019.1:1..35273;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000019.1 tpg gene 1 824 . - . ID=gene-ACYKJH_001321;Name=yibB;gbkey=Gene;gene=yibB;gene_biotype=protein_coding;locus_tag=ACYKJH_001321;partial=true;start_range=.,1 DBLQKK010000019.1 Protein Homology CDS 1 824 . - 0 ID=cds-HIH2189418.1;Parent=gene-ACYKJH_001321;Dbxref=NCBI_GP:HIH2189418.1;Name=HIH2189418.1;gbkey=CDS;gene=yibB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002780629.1;locus_tag=ACYKJH_001321;partial=true;product=protein YibB;protein_id=HIH2189418.1;start_range=.,1;transl_table=11 DBLQKK010000019.1 tpg gene 821 1777 . - . ID=gene-ACYKJH_001322;Name=wlaTB;gbkey=Gene;gene=wlaTB;gene_biotype=protein_coding;locus_tag=ACYKJH_001322 DBLQKK010000019.1 Protein Homology CDS 821 1777 . - 0 ID=cds-HIH2189419.1;Parent=gene-ACYKJH_001322;Dbxref=NCBI_GP:HIH2189419.1;Name=HIH2189419.1;gbkey=CDS;gene=wlaTB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002869613.1;locus_tag=ACYKJH_001322;product=class E lipooligosaccharide biosynthesis protein WlaTB;protein_id=HIH2189419.1;transl_table=11 DBLQKK010000019.1 tpg gene 1770 2543 . - . ID=gene-ACYKJH_001323;Name=ACYKJH_001323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001323 DBLQKK010000019.1 Protein Homology CDS 1770 2543 . - 0 ID=cds-HIH2189420.1;Parent=gene-ACYKJH_001323;Dbxref=NCBI_GP:HIH2189420.1;Name=HIH2189420.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013882.6;locus_tag=ACYKJH_001323;product=glycosyltransferase family 25 protein;protein_id=HIH2189420.1;transl_table=11 DBLQKK010000019.1 tpg pseudogene 2614 3637 . + . ID=gene-ACYKJH_001324;Name=ACYKJH_001324;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001324;pseudo=true DBLQKK010000019.1 Protein Homology CDS 2614 3637 . + 0 ID=cds-ACYKJH_001324;Parent=gene-ACYKJH_001324;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002891861.1;locus_tag=ACYKJH_001324;product=hypothetical protein;pseudo=true;transl_table=11 DBLQKK010000019.1 tpg gene 3634 4893 . + . ID=gene-ACYKJH_001325;Name=ACYKJH_001325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001325 DBLQKK010000019.1 Protein Homology CDS 3634 4893 . + 0 ID=cds-HIH2189421.1;Parent=gene-ACYKJH_001325;Dbxref=NCBI_GP:HIH2189421.1;Name=HIH2189421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002869603.1;locus_tag=ACYKJH_001325;product=DUF2972 domain-containing protein;protein_id=HIH2189421.1;transl_table=11 DBLQKK010000019.1 tpg gene 4920 6005 . - . ID=gene-ACYKJH_001326;Name=wlaRG;gbkey=Gene;gene=wlaRG;gene_biotype=protein_coding;locus_tag=ACYKJH_001326 DBLQKK010000019.1 Protein Homology CDS 4920 6005 . - 0 ID=cds-HIH2189422.1;Parent=gene-ACYKJH_001326;Dbxref=NCBI_GP:HIH2189422.1;Name=HIH2189422.1;gbkey=CDS;gene=wlaRG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032603539.1;locus_tag=ACYKJH_001326;product=class E lipooligosaccharide biosynthesis aminotransferase WlaRG;protein_id=HIH2189422.1;transl_table=11 DBLQKK010000019.1 tpg gene 5971 7023 . - . ID=gene-ACYKJH_001327;Name=ACYKJH_001327;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001327 DBLQKK010000019.1 Protein Homology CDS 5971 7023 . - 0 ID=cds-HIH2189423.1;Parent=gene-ACYKJH_001327;Dbxref=NCBI_GP:HIH2189423.1;Name=HIH2189423.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002869601.1;locus_tag=ACYKJH_001327;product=glycosyltransferase family 2 protein;protein_id=HIH2189423.1;transl_table=11 DBLQKK010000019.1 tpg gene 7036 8100 . - . ID=gene-ACYKJH_001328;Name=ACYKJH_001328;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001328 DBLQKK010000019.1 Protein Homology CDS 7036 8100 . - 0 ID=cds-HIH2189424.1;Parent=gene-ACYKJH_001328;Dbxref=NCBI_GP:HIH2189424.1;Name=HIH2189424.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002869599.1;locus_tag=ACYKJH_001328;product=glycosyltransferase family 2 protein;protein_id=HIH2189424.1;transl_table=11 DBLQKK010000019.1 tpg pseudogene 8119 8376 . - . ID=gene-ACYKJH_001329;Name=ACYKJH_001329;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001329;pseudo=true DBLQKK010000019.1 Protein Homology CDS 8119 8376 . - 0 ID=cds-ACYKJH_001329;Parent=gene-ACYKJH_001329;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002866154.1;locus_tag=ACYKJH_001329;product=hypothetical protein;pseudo=true;transl_table=11 DBLQKK010000019.1 tpg gene 8397 8924 . - . ID=gene-ACYKJH_001330;Name=ACYKJH_001330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001330 DBLQKK010000019.1 Protein Homology CDS 8397 8924 . - 0 ID=cds-HIH2189425.1;Parent=gene-ACYKJH_001330;Dbxref=NCBI_GP:HIH2189425.1;Name=HIH2189425.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002876185.1;locus_tag=ACYKJH_001330;product=GNAT family N-acetyltransferase;protein_id=HIH2189425.1;transl_table=11 DBLQKK010000019.1 tpg pseudogene 8946 9388 . - . ID=gene-ACYKJH_001331;Name=ACYKJH_001331;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001331;pseudo=true DBLQKK010000019.1 Protein Homology CDS 8946 9388 . - 0 ID=cds-ACYKJH_001331;Parent=gene-ACYKJH_001331;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020247173.1;locus_tag=ACYKJH_001331;product=DapH/DapD/GlmU-related protein;pseudo=true;transl_table=11 DBLQKK010000019.1 tpg gene 9378 9782 . - . ID=gene-ACYKJH_001332;Name=wlaRB;gbkey=Gene;gene=wlaRB;gene_biotype=protein_coding;locus_tag=ACYKJH_001332 DBLQKK010000019.1 Protein Homology CDS 9378 9782 . - 0 ID=cds-HIH2189426.1;Parent=gene-ACYKJH_001332;Dbxref=NCBI_GP:HIH2189426.1;Name=HIH2189426.1;gbkey=CDS;gene=wlaRB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002860228.1;locus_tag=ACYKJH_001332;product=class E lipooligosaccharide biosynthesis 3%2C4-ketoisomerase WlaRB;protein_id=HIH2189426.1;transl_table=11 DBLQKK010000019.1 tpg gene 9779 10228 . - . ID=gene-ACYKJH_001333;Name=wlaRA;gbkey=Gene;gene=wlaRA;gene_biotype=protein_coding;locus_tag=ACYKJH_001333 DBLQKK010000019.1 Protein Homology CDS 9779 10228 . - 0 ID=cds-HIH2189427.1;Parent=gene-ACYKJH_001333;Dbxref=NCBI_GP:HIH2189427.1;Name=HIH2189427.1;gbkey=CDS;gene=wlaRA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002912325.1;locus_tag=ACYKJH_001333;product=class E lipooligosaccharide biosynthesis 3%2C4-ketoisomerase WlaRA;protein_id=HIH2189427.1;transl_table=11 DBLQKK010000019.1 tpg gene 10231 11262 . - . ID=gene-ACYKJH_001334;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=ACYKJH_001334 DBLQKK010000019.1 Protein Homology CDS 10231 11262 . - 0 ID=cds-HIH2189428.1;Parent=gene-ACYKJH_001334;Dbxref=NCBI_GP:HIH2189428.1;Name=HIH2189428.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014517055.1;locus_tag=ACYKJH_001334;product=dTDP-glucose 4%2C6-dehydratase;protein_id=HIH2189428.1;transl_table=11 DBLQKK010000019.1 tpg gene 11262 12140 . - . ID=gene-ACYKJH_001335;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=ACYKJH_001335 DBLQKK010000019.1 Protein Homology CDS 11262 12140 . - 0 ID=cds-HIH2189429.1;Parent=gene-ACYKJH_001335;Dbxref=NCBI_GP:HIH2189429.1;Name=HIH2189429.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002877054.1;locus_tag=ACYKJH_001335;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=HIH2189429.1;transl_table=11 DBLQKK010000019.1 tpg gene 12151 12852 . - . ID=gene-ACYKJH_001336;Name=ACYKJH_001336;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001336 DBLQKK010000019.1 Protein Homology CDS 12151 12852 . - 0 ID=cds-HIH2189430.1;Parent=gene-ACYKJH_001336;Dbxref=NCBI_GP:HIH2189430.1;Name=HIH2189430.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002876132.1;locus_tag=ACYKJH_001336;product=glycosyltransferase family 2 protein;protein_id=HIH2189430.1;transl_table=11 DBLQKK010000019.1 tpg gene 12849 13727 . - . ID=gene-ACYKJH_001337;Name=htrB;gbkey=Gene;gene=htrB;gene_biotype=protein_coding;locus_tag=ACYKJH_001337 DBLQKK010000019.1 Protein Homology CDS 12849 13727 . - 0 ID=cds-HIH2189431.1;Parent=gene-ACYKJH_001337;Dbxref=NCBI_GP:HIH2189431.1;Name=HIH2189431.1;gbkey=CDS;gene=htrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002932656.1;locus_tag=ACYKJH_001337;product=lipid A biosynthesis lauroyl acyltransferase HtrB;protein_id=HIH2189431.1;transl_table=11 DBLQKK010000019.1 tpg gene 13717 14745 . - . ID=gene-ACYKJH_001338;Name=waaC;gbkey=Gene;gene=waaC;gene_biotype=protein_coding;locus_tag=ACYKJH_001338 DBLQKK010000019.1 Protein Homology CDS 13717 14745 . - 0 ID=cds-HIH2189432.1;Parent=gene-ACYKJH_001338;Dbxref=NCBI_GP:HIH2189432.1;Name=HIH2189432.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=waaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344526.1;locus_tag=ACYKJH_001338;product=lipopolysaccharide heptosyltransferase I;protein_id=HIH2189432.1;transl_table=11 DBLQKK010000019.1 tpg gene 14812 15606 . + . ID=gene-ACYKJH_001339;Name=ACYKJH_001339;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001339 DBLQKK010000019.1 Protein Homology CDS 14812 15606 . + 0 ID=cds-HIH2189433.1;Parent=gene-ACYKJH_001339;Dbxref=NCBI_GP:HIH2189433.1;Name=HIH2189433.1;Ontology_term=GO:0003676,GO:0008408;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344525.1;locus_tag=ACYKJH_001339;product=3'-5' exonuclease;protein_id=HIH2189433.1;transl_table=11 DBLQKK010000019.1 tpg gene 15665 16651 . + . ID=gene-ACYKJH_001340;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=ACYKJH_001340 DBLQKK010000019.1 Protein Homology CDS 15665 16651 . + 0 ID=cds-HIH2189434.1;Parent=gene-ACYKJH_001340;Dbxref=NCBI_GP:HIH2189434.1;Name=HIH2189434.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344524.1;locus_tag=ACYKJH_001340;product=UDP-glucose 4-epimerase GalE;protein_id=HIH2189434.1;transl_table=11 DBLQKK010000019.1 tpg gene 16645 18339 . + . ID=gene-ACYKJH_001341;Name=pglK;gbkey=Gene;gene=pglK;gene_biotype=protein_coding;locus_tag=ACYKJH_001341 DBLQKK010000019.1 Protein Homology CDS 16645 18339 . + 0 ID=cds-HIH2189435.1;Parent=gene-ACYKJH_001341;Dbxref=NCBI_GP:HIH2189435.1;Name=HIH2189435.1;Ontology_term=GO:0006487,GO:0016887,GO:0034040;gbkey=CDS;gene=pglK;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA;go_process=protein N-linked glycosylation|0006487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344523.1;locus_tag=ACYKJH_001341;product=BC-type lipopolysaccharide transporter PglK;protein_id=HIH2189435.1;transl_table=11 DBLQKK010000019.1 tpg gene 18336 19415 . + . ID=gene-ACYKJH_001342;Name=pglH;gbkey=Gene;gene=pglH;gene_biotype=protein_coding;locus_tag=ACYKJH_001342 DBLQKK010000019.1 Protein Homology CDS 18336 19415 . + 0 ID=cds-HIH2189436.1;Parent=gene-ACYKJH_001342;Dbxref=NCBI_GP:HIH2189436.1;Name=HIH2189436.1;Ontology_term=GO:0018279,GO:0016758;gbkey=CDS;gene=pglH;go_function=hexosyltransferase activity|0016758||IEA;go_process=protein N-linked glycosylation via asparagine|0018279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344522.1;locus_tag=ACYKJH_001342;product=GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)-diNAcBac-PP-undecaprenol alpha-1%2C4-N-acetyl-D-galactosaminyltransferase;protein_id=HIH2189436.1;transl_table=11 DBLQKK010000019.1 tpg gene 19408 20337 . + . ID=gene-ACYKJH_001343;Name=pglI;gbkey=Gene;gene=pglI;gene_biotype=protein_coding;locus_tag=ACYKJH_001343 DBLQKK010000019.1 Protein Homology CDS 19408 20337 . + 0 ID=cds-HIH2189437.1;Parent=gene-ACYKJH_001343;Dbxref=NCBI_GP:HIH2189437.1;Name=HIH2189437.1;Ontology_term=GO:0018279,GO:0046527;gbkey=CDS;gene=pglI;go_function=glucosyltransferase activity|0046527||IEA;go_process=protein N-linked glycosylation via asparagine|0018279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344521.1;locus_tag=ACYKJH_001343;product=GalNAc(5)-diNAcBac-PP-undecaprenol beta-1%2C3-glucosyltransferase;protein_id=HIH2189437.1;transl_table=11 DBLQKK010000019.1 tpg gene 20325 21422 . + . ID=gene-ACYKJH_001344;Name=pglJ;gbkey=Gene;gene=pglJ;gene_biotype=protein_coding;locus_tag=ACYKJH_001344 DBLQKK010000019.1 Protein Homology CDS 20325 21422 . + 0 ID=cds-HIH2189438.1;Parent=gene-ACYKJH_001344;Dbxref=NCBI_GP:HIH2189438.1;Name=HIH2189438.1;Ontology_term=GO:0009103,GO:0018279,GO:0016758;gbkey=CDS;gene=pglJ;go_function=hexosyltransferase activity|0016758||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,protein N-linked glycosylation via asparagine|0018279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344520.1;locus_tag=ACYKJH_001344;product=N-acetylgalactosamine-N%2CN'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase;protein_id=HIH2189438.1;transl_table=11 DBLQKK010000019.1 tpg gene 21426 23567 . + . ID=gene-ACYKJH_001345;Name=pglB;gbkey=Gene;gene=pglB;gene_biotype=protein_coding;locus_tag=ACYKJH_001345 DBLQKK010000019.1 Protein Homology CDS 21426 23567 . + 0 ID=cds-HIH2189439.1;Parent=gene-ACYKJH_001345;Dbxref=NCBI_GP:HIH2189439.1;Name=HIH2189439.1;gbkey=CDS;gene=pglB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344519.1;locus_tag=ACYKJH_001345;product=undecaprenyl-diphosphooligosaccharide--protein glycotransferase;protein_id=HIH2189439.1;transl_table=11 DBLQKK010000019.1 tpg gene 23577 24707 . + . ID=gene-ACYKJH_001346;Name=pglA;gbkey=Gene;gene=pglA;gene_biotype=protein_coding;locus_tag=ACYKJH_001346 DBLQKK010000019.1 Protein Homology CDS 23577 24707 . + 0 ID=cds-HIH2189440.1;Parent=gene-ACYKJH_001346;Dbxref=NCBI_GP:HIH2189440.1;Name=HIH2189440.1;gbkey=CDS;gene=pglA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344518.1;locus_tag=ACYKJH_001346;product=N%2CN'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1%2C3-N-acetylgalactosaminyltransferase;protein_id=HIH2189440.1;transl_table=11 DBLQKK010000019.1 tpg gene 24700 25302 . + . ID=gene-ACYKJH_001347;Name=pglC;gbkey=Gene;gene=pglC;gene_biotype=protein_coding;locus_tag=ACYKJH_001347 DBLQKK010000019.1 Protein Homology CDS 24700 25302 . + 0 ID=cds-HIH2189441.1;Parent=gene-ACYKJH_001347;Dbxref=NCBI_GP:HIH2189441.1;Name=HIH2189441.1;gbkey=CDS;gene=pglC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344517.1;locus_tag=ACYKJH_001347;product=undecaprenyl phosphate N%2CN'-diacetylbacillosamine 1-phosphate transferase;protein_id=HIH2189441.1;transl_table=11 DBLQKK010000019.1 tpg gene 25289 25879 . + . ID=gene-ACYKJH_001348;Name=pglD;gbkey=Gene;gene=pglD;gene_biotype=protein_coding;locus_tag=ACYKJH_001348 DBLQKK010000019.1 Protein Homology CDS 25289 25879 . + 0 ID=cds-HIH2189442.1;Parent=gene-ACYKJH_001348;Dbxref=NCBI_GP:HIH2189442.1;Name=HIH2189442.1;gbkey=CDS;gene=pglD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002872223.1;locus_tag=ACYKJH_001348;product=UDP-N-acetylbacillosamine N-acetyltransferase;protein_id=HIH2189442.1;transl_table=11 DBLQKK010000019.1 tpg gene 25977 27137 . + . ID=gene-ACYKJH_001349;Name=pglE;gbkey=Gene;gene=pglE;gene_biotype=protein_coding;locus_tag=ACYKJH_001349 DBLQKK010000019.1 Protein Homology CDS 25977 27137 . + 0 ID=cds-HIH2189443.1;Parent=gene-ACYKJH_001349;Dbxref=NCBI_GP:HIH2189443.1;Name=HIH2189443.1;gbkey=CDS;gene=pglE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344514.1;locus_tag=ACYKJH_001349;product=UDP-N-acetylbacillosamine transaminase;protein_id=HIH2189443.1;transl_table=11 DBLQKK010000019.1 tpg gene 27139 28914 . + . ID=gene-ACYKJH_001350;Name=pglF;gbkey=Gene;gene=pglF;gene_biotype=protein_coding;locus_tag=ACYKJH_001350 DBLQKK010000019.1 Protein Homology CDS 27139 28914 . + 0 ID=cds-HIH2189444.1;Parent=gene-ACYKJH_001350;Dbxref=NCBI_GP:HIH2189444.1;Name=HIH2189444.1;gbkey=CDS;gene=pglF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344513.1;locus_tag=ACYKJH_001350;product=UDP-N-acetylglucosamine 4%2C6-dehydratase (configuration-retaining);protein_id=HIH2189444.1;transl_table=11 DBLQKK010000019.1 tpg gene 28914 29807 . + . ID=gene-ACYKJH_001351;Name=pglG;gbkey=Gene;gene=pglG;gene_biotype=protein_coding;locus_tag=ACYKJH_001351 DBLQKK010000019.1 Protein Homology CDS 28914 29807 . + 0 ID=cds-HIH2189445.1;Parent=gene-ACYKJH_001351;Dbxref=NCBI_GP:HIH2189445.1;Name=HIH2189445.1;Ontology_term=GO:0007165;gbkey=CDS;gene=pglG;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344512.1;locus_tag=ACYKJH_001351;product=PDC sensor domain-containing protein;protein_id=HIH2189445.1;transl_table=11 DBLQKK010000019.1 tpg gene 29920 30312 . + . ID=gene-ACYKJH_001352;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=ACYKJH_001352 DBLQKK010000019.1 Protein Homology CDS 29920 30312 . + 0 ID=cds-HIH2189446.1;Parent=gene-ACYKJH_001352;Dbxref=NCBI_GP:HIH2189446.1;Name=HIH2189446.1;Ontology_term=GO:0000160,GO:0006935,GO:0000156;gbkey=CDS;gene=cheY;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344511.1;locus_tag=ACYKJH_001352;product=chemotaxis response regulator CheY;protein_id=HIH2189446.1;transl_table=11 DBLQKK010000019.1 tpg gene 30335 31180 . + . ID=gene-ACYKJH_001353;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=ACYKJH_001353 DBLQKK010000019.1 Protein Homology CDS 30335 31180 . + 0 ID=cds-HIH2189447.1;Parent=gene-ACYKJH_001353;Dbxref=NCBI_GP:HIH2189447.1;Name=HIH2189447.1;gbkey=CDS;gene=prmA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344510.1;locus_tag=ACYKJH_001353;product=50S ribosomal protein L11 methyltransferase;protein_id=HIH2189447.1;transl_table=11 DBLQKK010000019.1 tpg gene 31184 33121 . + . ID=gene-ACYKJH_001354;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=ACYKJH_001354 DBLQKK010000019.1 Protein Homology CDS 31184 33121 . + 0 ID=cds-HIH2189448.1;Parent=gene-ACYKJH_001354;Dbxref=NCBI_GP:HIH2189448.1;Name=HIH2189448.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344509.1;locus_tag=ACYKJH_001354;product=ATP-dependent zinc metalloprotease FtsH;protein_id=HIH2189448.1;transl_table=11 DBLQKK010000019.1 tpg gene 33118 33735 . + . ID=gene-ACYKJH_001355;Name=ACYKJH_001355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001355 DBLQKK010000019.1 Protein Homology CDS 33118 33735 . + 0 ID=cds-HIH2189449.1;Parent=gene-ACYKJH_001355;Dbxref=NCBI_GP:HIH2189449.1;Name=HIH2189449.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344508.1;locus_tag=ACYKJH_001355;product=phosphatidylserine decarboxylase;protein_id=HIH2189449.1;transl_table=11 DBLQKK010000019.1 tpg gene 33745 34473 . + . ID=gene-ACYKJH_001356;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=ACYKJH_001356 DBLQKK010000019.1 Protein Homology CDS 33745 34473 . + 0 ID=cds-HIH2189450.1;Parent=gene-ACYKJH_001356;Dbxref=NCBI_GP:HIH2189450.1;Name=HIH2189450.1;Ontology_term=GO:0008654,GO:0003882;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-serine O-phosphatidyltransferase activity|0003882||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344507.1;locus_tag=ACYKJH_001356;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=HIH2189450.1;transl_table=11 DBLQKK010000019.1 tpg gene 34464 35261 . - . ID=gene-ACYKJH_001357;Name=ACYKJH_001357;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001357 DBLQKK010000019.1 Protein Homology CDS 34464 35261 . - 0 ID=cds-HIH2189451.1;Parent=gene-ACYKJH_001357;Dbxref=NCBI_GP:HIH2189451.1;Name=HIH2189451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344506.1;locus_tag=ACYKJH_001357;product=ferritin-like domain-containing protein;protein_id=HIH2189451.1;transl_table=11 ##sequence-region DBLQKK010000020.1 1 31364 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000020.1 tpg region 1 31364 . + . ID=DBLQKK010000020.1:1..31364;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000020.1 tpg gene 94 2067 . + . ID=gene-ACYKJH_001358;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=ACYKJH_001358 DBLQKK010000020.1 Protein Homology CDS 94 2067 . + 0 ID=cds-HIH2189452.1;Parent=gene-ACYKJH_001358;Dbxref=NCBI_GP:HIH2189452.1;Name=HIH2189452.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344909.1;locus_tag=ACYKJH_001358;product=acetate--CoA ligase;protein_id=HIH2189452.1;transl_table=11 DBLQKK010000020.1 tpg gene 2149 2973 . + . ID=gene-ACYKJH_001359;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=ACYKJH_001359 DBLQKK010000020.1 Protein Homology CDS 2149 2973 . + 0 ID=cds-HIH2189453.1;Parent=gene-ACYKJH_001359;Dbxref=NCBI_GP:HIH2189453.1;Name=HIH2189453.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344908.1;locus_tag=ACYKJH_001359;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=HIH2189453.1;transl_table=11 DBLQKK010000020.1 tpg gene 2967 4187 . + . ID=gene-ACYKJH_001360;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=ACYKJH_001360 DBLQKK010000020.1 Protein Homology CDS 2967 4187 . + 0 ID=cds-HIH2189454.1;Parent=gene-ACYKJH_001360;Dbxref=NCBI_GP:HIH2189454.1;Name=HIH2189454.1;gbkey=CDS;gene=pgi;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344907.1;locus_tag=ACYKJH_001360;product=glucose-6-phosphate isomerase;protein_id=HIH2189454.1;transl_table=11 DBLQKK010000020.1 tpg gene 4314 4763 . + . ID=gene-ACYKJH_001361;Name=ACYKJH_001361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001361 DBLQKK010000020.1 Protein Homology CDS 4314 4763 . + 0 ID=cds-HIH2189455.1;Parent=gene-ACYKJH_001361;Dbxref=NCBI_GP:HIH2189455.1;Name=HIH2189455.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344906.1;locus_tag=ACYKJH_001361;product=Dps family protein;protein_id=HIH2189455.1;transl_table=11 DBLQKK010000020.1 tpg gene 4828 5865 . + . ID=gene-ACYKJH_001362;Name=ACYKJH_001362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001362 DBLQKK010000020.1 Protein Homology CDS 4828 5865 . + 0 ID=cds-HIH2189456.1;Parent=gene-ACYKJH_001362;Dbxref=NCBI_GP:HIH2189456.1;Name=HIH2189456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344905.1;locus_tag=ACYKJH_001362;product=DUF4143 domain-containing protein;protein_id=HIH2189456.1;transl_table=11 DBLQKK010000020.1 tpg gene 5862 6593 . - . ID=gene-ACYKJH_001363;Name=ACYKJH_001363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001363 DBLQKK010000020.1 Protein Homology CDS 5862 6593 . - 0 ID=cds-HIH2189457.1;Parent=gene-ACYKJH_001363;Dbxref=NCBI_GP:HIH2189457.1;Name=HIH2189457.1;Ontology_term=GO:0004040;gbkey=CDS;go_function=amidase activity|0004040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344904.1;locus_tag=ACYKJH_001363;product=glucosaminidase domain-containing protein;protein_id=HIH2189457.1;transl_table=11 DBLQKK010000020.1 tpg gene 6568 7317 . - . ID=gene-ACYKJH_001364;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=ACYKJH_001364 DBLQKK010000020.1 Protein Homology CDS 6568 7317 . - 0 ID=cds-HIH2189458.1;Parent=gene-ACYKJH_001364;Dbxref=NCBI_GP:HIH2189458.1;Name=HIH2189458.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002855997.1;locus_tag=ACYKJH_001364;product=diaminopimelate epimerase;protein_id=HIH2189458.1;transl_table=11 DBLQKK010000020.1 tpg gene 7314 7919 . - . ID=gene-ACYKJH_001365;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=ACYKJH_001365 DBLQKK010000020.1 Protein Homology CDS 7314 7919 . - 0 ID=cds-HIH2189459.1;Parent=gene-ACYKJH_001365;Dbxref=NCBI_GP:HIH2189459.1;Name=HIH2189459.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344902.1;locus_tag=ACYKJH_001365;product=dephospho-CoA kinase;protein_id=HIH2189459.1;transl_table=11 DBLQKK010000020.1 tpg gene 7980 8969 . + . ID=gene-ACYKJH_001366;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=ACYKJH_001366 DBLQKK010000020.1 Protein Homology CDS 7980 8969 . + 0 ID=cds-HIH2189460.1;Parent=gene-ACYKJH_001366;Dbxref=NCBI_GP:HIH2189460.1;Name=HIH2189460.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344901.1;locus_tag=ACYKJH_001366;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=HIH2189460.1;transl_table=11 DBLQKK010000020.1 tpg pseudogene 8990 10443 . - . ID=gene-ACYKJH_001367;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=pseudogene;locus_tag=ACYKJH_001367;pseudo=true DBLQKK010000020.1 Protein Homology CDS 8990 10443 . - 0 ID=cds-ACYKJH_001367;Parent=gene-ACYKJH_001367;Note=frameshifted;Ontology_term=GO:0015740,GO:0015556,GO:0016020;gbkey=CDS;gene=dcuC;go_component=membrane|0016020||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010790683.1;locus_tag=ACYKJH_001367;product=C4-dicarboxylate transporter DcuC;pseudo=true;transl_table=11 DBLQKK010000020.1 tpg gene 10650 13613 . + . ID=gene-ACYKJH_001368;Name=cas9;gbkey=Gene;gene=cas9;gene_biotype=protein_coding;gene_synonym=csn1;locus_tag=ACYKJH_001368 DBLQKK010000020.1 Protein Homology CDS 10650 13613 . + 0 ID=cds-HIH2189461.1;Parent=gene-ACYKJH_001368;Dbxref=NCBI_GP:HIH2189461.1;Name=HIH2189461.1;Note=Cas9%2C originally named Csn1%2C is the large%2C multifunctional signature protein of type II CRISPR/Cas systems. It is well known even to general audiences because its RNA-guided endonuclease activity has made it a popular tool for custom editing of eukaryotic genomes.;Ontology_term=GO:0043571,GO:0004520;gbkey=CDS;gene=cas9;go_function=DNA endonuclease activity|0004520||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010790896.1;locus_tag=ACYKJH_001368;product=type II CRISPR RNA-guided endonuclease Cas9;protein_id=HIH2189461.1;transl_table=11 DBLQKK010000020.1 tpg gene 13600 14490 . + . ID=gene-ACYKJH_001369;Name=cas1;gbkey=Gene;gene=cas1;gene_biotype=protein_coding;locus_tag=ACYKJH_001369 DBLQKK010000020.1 Protein Homology CDS 13600 14490 . + 0 ID=cds-HIH2189462.1;Parent=gene-ACYKJH_001369;Dbxref=NCBI_GP:HIH2189462.1;Name=HIH2189462.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344899.1;locus_tag=ACYKJH_001369;product=type II CRISPR-associated endonuclease Cas1;protein_id=HIH2189462.1;transl_table=11 DBLQKK010000020.1 tpg gene 14483 14914 . + . ID=gene-ACYKJH_001370;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=ACYKJH_001370 DBLQKK010000020.1 Protein Homology CDS 14483 14914 . + 0 ID=cds-HIH2189463.1;Parent=gene-ACYKJH_001370;Dbxref=NCBI_GP:HIH2189463.1;Name=HIH2189463.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006656554.1;locus_tag=ACYKJH_001370;product=CRISPR-associated endonuclease Cas2;protein_id=HIH2189463.1;transl_table=11 DBLQKK010000020.1 tpg direct_repeat 15059 15357 . + . ID=id-DBLQKK010000020.1:15059..15357;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=15059..15094;rpt_unit_seq=attttaccataaagaaatttaaaaagggactaaaat DBLQKK010000020.1 tpg gene 15477 16667 . - . ID=gene-ACYKJH_001371;Name=ACYKJH_001371;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001371 DBLQKK010000020.1 Protein Homology CDS 15477 16667 . - 0 ID=cds-HIH2189464.1;Parent=gene-ACYKJH_001371;Dbxref=NCBI_GP:HIH2189464.1;Name=HIH2189464.1;Ontology_term=GO:0030151,GO:0046872;gbkey=CDS;go_function=molybdenum ion binding|0030151||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344897.1;locus_tag=ACYKJH_001371;product=molybdopterin molybdotransferase MoeA;protein_id=HIH2189464.1;transl_table=11 DBLQKK010000020.1 tpg gene 16671 17117 . - . ID=gene-ACYKJH_001372;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=ACYKJH_001372 DBLQKK010000020.1 Protein Homology CDS 16671 17117 . - 0 ID=cds-HIH2189465.1;Parent=gene-ACYKJH_001372;Dbxref=NCBI_GP:HIH2189465.1;Name=HIH2189465.1;Ontology_term=GO:0006777,GO:0030366,GO:1990140;gbkey=CDS;gene=moaE;go_component=molybdopterin synthase complex|1990140||IEA;go_function=molybdopterin synthase activity|0030366||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344896.1;locus_tag=ACYKJH_001372;product=molybdopterin synthase catalytic subunit;protein_id=HIH2189465.1;transl_table=11 DBLQKK010000020.1 tpg gene 17118 17339 . - . ID=gene-ACYKJH_001373;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=ACYKJH_001373 DBLQKK010000020.1 Protein Homology CDS 17118 17339 . - 0 ID=cds-HIH2189466.1;Parent=gene-ACYKJH_001373;Dbxref=NCBI_GP:HIH2189466.1;Name=HIH2189466.1;gbkey=CDS;gene=moaD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344895.1;locus_tag=ACYKJH_001373;product=MoaD/ThiS family protein;protein_id=HIH2189466.1;transl_table=11 DBLQKK010000020.1 tpg gene 17341 18882 . - . ID=gene-ACYKJH_001374;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=ACYKJH_001374 DBLQKK010000020.1 Protein Homology CDS 17341 18882 . - 0 ID=cds-HIH2189467.1;Parent=gene-ACYKJH_001374;Dbxref=NCBI_GP:HIH2189467.1;Name=HIH2189467.1;gbkey=CDS;gene=cueO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344894.1;locus_tag=ACYKJH_001374;product=multicopper oxidase CueO;protein_id=HIH2189467.1;transl_table=11 DBLQKK010000020.1 tpg gene 19006 20154 . + . ID=gene-ACYKJH_001375;Name=nspC;gbkey=Gene;gene=nspC;gene_biotype=protein_coding;locus_tag=ACYKJH_001375 DBLQKK010000020.1 Protein Homology CDS 19006 20154 . + 0 ID=cds-HIH2189468.1;Parent=gene-ACYKJH_001375;Dbxref=NCBI_GP:HIH2189468.1;Name=HIH2189468.1;Ontology_term=GO:0045312,GO:0016831;gbkey=CDS;gene=nspC;go_function=carboxy-lyase activity|0016831||IEA;go_process=nor-spermidine biosynthetic process|0045312||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344893.1;locus_tag=ACYKJH_001375;product=carboxynorspermidine decarboxylase;protein_id=HIH2189468.1;transl_table=11 DBLQKK010000020.1 tpg gene 20458 21171 . + . ID=gene-ACYKJH_001376;Name=ACYKJH_001376;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001376 DBLQKK010000020.1 Protein Homology CDS 20458 21171 . + 0 ID=cds-HIH2189469.1;Parent=gene-ACYKJH_001376;Dbxref=NCBI_GP:HIH2189469.1;Name=HIH2189469.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344892.1;locus_tag=ACYKJH_001376;product=TorD/DmsD family molecular chaperone;protein_id=HIH2189469.1;transl_table=11 DBLQKK010000020.1 tpg gene 21146 21337 . + . ID=gene-ACYKJH_001377;Name=ACYKJH_001377;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001377 DBLQKK010000020.1 Protein Homology CDS 21146 21337 . + 0 ID=cds-HIH2189470.1;Parent=gene-ACYKJH_001377;Dbxref=NCBI_GP:HIH2189470.1;Name=HIH2189470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344891.1;locus_tag=ACYKJH_001377;product=twin-arginine translocation signal domain-containing protein;protein_id=HIH2189470.1;transl_table=11 DBLQKK010000020.1 tpg gene 21337 24141 . + . ID=gene-ACYKJH_001378;Name=fdhA;gbkey=Gene;gene=fdhA;gene_biotype=protein_coding;locus_tag=ACYKJH_001378 DBLQKK010000020.1 Protein Homology CDS 21337 24141 . + 0 ID=cds-HIH2189471.1;Parent=gene-ACYKJH_001378;Dbxref=NCBI_GP:HIH2189471.1;Name=HIH2189471.1;gbkey=CDS;gene=fdhA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344890.1;locus_tag=ACYKJH_001378;product=formate dehydrogenase subunit alpha;protein_id=HIH2189471.1;transl_except=(pos:21877..21879%2Caa:Sec);transl_table=11 DBLQKK010000020.1 tpg gene 24138 24779 . + . ID=gene-ACYKJH_001379;Name=fdh3B;gbkey=Gene;gene=fdh3B;gene_biotype=protein_coding;locus_tag=ACYKJH_001379 DBLQKK010000020.1 Protein Homology CDS 24138 24779 . + 0 ID=cds-HIH2189472.1;Parent=gene-ACYKJH_001379;Dbxref=NCBI_GP:HIH2189472.1;Name=HIH2189472.1;Ontology_term=GO:0009055;gbkey=CDS;gene=fdh3B;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344889.1;locus_tag=ACYKJH_001379;product=formate dehydrogenase FDH3 subunit beta;protein_id=HIH2189472.1;transl_table=11 DBLQKK010000020.1 tpg gene 24776 25708 . + . ID=gene-ACYKJH_001380;Name=fdhC;gbkey=Gene;gene=fdhC;gene_biotype=protein_coding;locus_tag=ACYKJH_001380 DBLQKK010000020.1 Protein Homology CDS 24776 25708 . + 0 ID=cds-HIH2189473.1;Parent=gene-ACYKJH_001380;Dbxref=NCBI_GP:HIH2189473.1;Name=HIH2189473.1;Ontology_term=GO:0009061,GO:0008863,GO:0009055,GO:0009326;gbkey=CDS;gene=fdhC;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344888.1;locus_tag=ACYKJH_001380;product=formate dehydrogenase subunit gamma;protein_id=HIH2189473.1;transl_table=11 DBLQKK010000020.1 tpg gene 25875 26657 . + . ID=gene-ACYKJH_001381;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=ACYKJH_001381 DBLQKK010000020.1 Protein Homology CDS 25875 26657 . + 0 ID=cds-HIH2189474.1;Parent=gene-ACYKJH_001381;Dbxref=NCBI_GP:HIH2189474.1;Name=HIH2189474.1;Ontology_term=GO:0016783;gbkey=CDS;gene=fdhD;go_function=sulfurtransferase activity|0016783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344887.1;locus_tag=ACYKJH_001381;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=HIH2189474.1;transl_table=11 DBLQKK010000020.1 tpg gene 26650 27387 . + . ID=gene-ACYKJH_001382;Name=ACYKJH_001382;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001382 DBLQKK010000020.1 Protein Homology CDS 26650 27387 . + 0 ID=cds-HIH2189475.1;Parent=gene-ACYKJH_001382;Dbxref=NCBI_GP:HIH2189475.1;Name=HIH2189475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344886.1;locus_tag=ACYKJH_001382;product=winged helix-turn-helix domain-containing protein;protein_id=HIH2189475.1;transl_table=11 DBLQKK010000020.1 tpg gene 27500 29602 . + . ID=gene-ACYKJH_001383;Name=ccaA;gbkey=Gene;gene=ccaA;gene_biotype=protein_coding;locus_tag=ACYKJH_001383 DBLQKK010000020.1 Protein Homology CDS 27500 29602 . + 0 ID=cds-HIH2189476.1;Parent=gene-ACYKJH_001383;Dbxref=NCBI_GP:HIH2189476.1;Name=HIH2189476.1;gbkey=CDS;gene=ccaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344885.1;locus_tag=ACYKJH_001383;product=aspartate chemotaxis receptor CcaA;protein_id=HIH2189476.1;transl_table=11 DBLQKK010000020.1 tpg gene 29713 30285 . + . ID=gene-ACYKJH_001384;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=ACYKJH_001384 DBLQKK010000020.1 Protein Homology CDS 29713 30285 . + 0 ID=cds-HIH2189477.1;Parent=gene-ACYKJH_001384;Dbxref=NCBI_GP:HIH2189477.1;Name=HIH2189477.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344884.1;locus_tag=ACYKJH_001384;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=HIH2189477.1;transl_table=11 DBLQKK010000020.1 tpg gene 30295 31317 . + . ID=gene-ACYKJH_001385;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=ACYKJH_001385 DBLQKK010000020.1 Protein Homology CDS 30295 31317 . + 0 ID=cds-HIH2189478.1;Parent=gene-ACYKJH_001385;Dbxref=NCBI_GP:HIH2189478.1;Name=HIH2189478.1;Ontology_term=GO:0001887,GO:0004756,GO:0005524;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA,ATP binding|0005524||IEA;go_process=selenium compound metabolic process|0001887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011049992.1;locus_tag=ACYKJH_001385;product=selenide%2C water dikinase SelD;protein_id=HIH2189478.1;transl_except=(pos:30343..30345%2Caa:Sec);transl_table=11 ##sequence-region DBLQKK010000021.1 1 30877 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000021.1 tpg region 1 30877 . + . ID=DBLQKK010000021.1:1..30877;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000021.1 tpg gene 105 1112 . - . ID=gene-ACYKJH_001386;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=ACYKJH_001386 DBLQKK010000021.1 Protein Homology CDS 105 1112 . - 0 ID=cds-HIH2189479.1;Parent=gene-ACYKJH_001386;Dbxref=NCBI_GP:HIH2189479.1;Name=HIH2189479.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005219155.1;locus_tag=ACYKJH_001386;product=type II asparaginase;protein_id=HIH2189479.1;transl_table=11 DBLQKK010000021.1 tpg gene 1196 2767 . - . ID=gene-ACYKJH_001387;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=ACYKJH_001387 DBLQKK010000021.1 Protein Homology CDS 1196 2767 . - 0 ID=cds-HIH2189480.1;Parent=gene-ACYKJH_001387;Dbxref=NCBI_GP:HIH2189480.1;Name=HIH2189480.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343500.1;locus_tag=ACYKJH_001387;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=HIH2189480.1;transl_table=11 DBLQKK010000021.1 tpg gene 2754 4385 . - . ID=gene-ACYKJH_001388;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=ACYKJH_001388 DBLQKK010000021.1 Protein Homology CDS 2754 4385 . - 0 ID=cds-HIH2189481.1;Parent=gene-ACYKJH_001388;Dbxref=NCBI_GP:HIH2189481.1;Name=HIH2189481.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343499.1;locus_tag=ACYKJH_001388;product=CTP synthase;protein_id=HIH2189481.1;transl_table=11 DBLQKK010000021.1 tpg gene 4505 5128 . + . ID=gene-ACYKJH_001389;Name=thyX;gbkey=Gene;gene=thyX;gene_biotype=protein_coding;locus_tag=ACYKJH_001389 DBLQKK010000021.1 Protein Homology CDS 4505 5128 . + 0 ID=cds-HIH2189482.1;Parent=gene-ACYKJH_001389;Dbxref=NCBI_GP:HIH2189482.1;Name=HIH2189482.1;Ontology_term=GO:0006231,GO:0050660,GO:0050797;gbkey=CDS;gene=thyX;go_function=flavin adenine dinucleotide binding|0050660||IEA,thymidylate synthase (FAD) activity|0050797||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343498.1;locus_tag=ACYKJH_001389;product=FAD-dependent thymidylate synthase;protein_id=HIH2189482.1;transl_table=11 DBLQKK010000021.1 tpg gene 5248 6633 . + . ID=gene-ACYKJH_001390;Name=ACYKJH_001390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001390 DBLQKK010000021.1 Protein Homology CDS 5248 6633 . + 0 ID=cds-HIH2189483.1;Parent=gene-ACYKJH_001390;Dbxref=NCBI_GP:HIH2189483.1;Name=HIH2189483.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343497.1;locus_tag=ACYKJH_001390;product=cation:dicarboxylate symporter family transporter;protein_id=HIH2189483.1;transl_table=11 DBLQKK010000021.1 tpg gene 6672 9041 . - . ID=gene-ACYKJH_001391;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=ACYKJH_001391 DBLQKK010000021.1 Protein Homology CDS 6672 9041 . - 0 ID=cds-HIH2189484.1;Parent=gene-ACYKJH_001391;Dbxref=NCBI_GP:HIH2189484.1;Name=HIH2189484.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343496.1;locus_tag=ACYKJH_001391;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=HIH2189484.1;transl_table=11 DBLQKK010000021.1 tpg gene 9057 10385 . - . ID=gene-ACYKJH_001392;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=ACYKJH_001392 DBLQKK010000021.1 Protein Homology CDS 9057 10385 . - 0 ID=cds-HIH2189485.1;Parent=gene-ACYKJH_001392;Dbxref=NCBI_GP:HIH2189485.1;Name=HIH2189485.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343495.1;locus_tag=ACYKJH_001392;product=adenylosuccinate lyase;protein_id=HIH2189485.1;transl_table=11 DBLQKK010000021.1 tpg gene 10463 11365 . + . ID=gene-ACYKJH_001393;Name=ACYKJH_001393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001393 DBLQKK010000021.1 Protein Homology CDS 10463 11365 . + 0 ID=cds-HIH2189486.1;Parent=gene-ACYKJH_001393;Dbxref=NCBI_GP:HIH2189486.1;Name=HIH2189486.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343494.1;locus_tag=ACYKJH_001393;product=RluA family pseudouridine synthase;protein_id=HIH2189486.1;transl_table=11 DBLQKK010000021.1 tpg gene 11478 12356 . + . ID=gene-ACYKJH_001394;Name=ACYKJH_001394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001394 DBLQKK010000021.1 Protein Homology CDS 11478 12356 . + 0 ID=cds-HIH2189487.1;Parent=gene-ACYKJH_001394;Dbxref=NCBI_GP:HIH2189487.1;Name=HIH2189487.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343493.1;locus_tag=ACYKJH_001394;product=fumarylacetoacetate hydrolase family protein;protein_id=HIH2189487.1;transl_table=11 DBLQKK010000021.1 tpg gene 12420 13334 . + . ID=gene-ACYKJH_001395;Name=ACYKJH_001395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001395 DBLQKK010000021.1 Protein Homology CDS 12420 13334 . + 0 ID=cds-HIH2189488.1;Parent=gene-ACYKJH_001395;Dbxref=NCBI_GP:HIH2189488.1;Name=HIH2189488.1;Ontology_term=GO:0004130,GO:0016491,GO:0020037;gbkey=CDS;go_function=cytochrome-c peroxidase activity|0004130||IEA,oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343492.1;locus_tag=ACYKJH_001395;product=cytochrome-c peroxidase;protein_id=HIH2189488.1;transl_table=11 DBLQKK010000021.1 tpg gene 13324 15102 . + . ID=gene-ACYKJH_001396;Name=ACYKJH_001396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001396 DBLQKK010000021.1 Protein Homology CDS 13324 15102 . + 0 ID=cds-HIH2189489.1;Parent=gene-ACYKJH_001396;Dbxref=NCBI_GP:HIH2189489.1;Name=HIH2189489.1;Ontology_term=GO:0006935;gbkey=CDS;go_process=chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343491.1;locus_tag=ACYKJH_001396;product=methyl-accepting chemotaxis protein;protein_id=HIH2189489.1;transl_table=11 DBLQKK010000021.1 tpg gene 15208 15375 . + . ID=gene-ACYKJH_001397;Name=dba;gbkey=Gene;gene=dba;gene_biotype=protein_coding;locus_tag=ACYKJH_001397 DBLQKK010000021.1 Protein Homology CDS 15208 15375 . + 0 ID=cds-HIH2189490.1;Parent=gene-ACYKJH_001397;Dbxref=NCBI_GP:HIH2189490.1;Name=HIH2189490.1;gbkey=CDS;gene=dba;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343490.1;locus_tag=ACYKJH_001397;product=disulfide bond formation protein Dba;protein_id=HIH2189490.1;transl_table=11 DBLQKK010000021.1 tpg gene 15387 16913 . + . ID=gene-ACYKJH_001398;Name=dsbI;gbkey=Gene;gene=dsbI;gene_biotype=protein_coding;locus_tag=ACYKJH_001398 DBLQKK010000021.1 Protein Homology CDS 15387 16913 . + 0 ID=cds-HIH2189491.1;Parent=gene-ACYKJH_001398;Dbxref=NCBI_GP:HIH2189491.1;Name=HIH2189491.1;Ontology_term=GO:0006457,GO:0015035;gbkey=CDS;gene=dsbI;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343489.1;locus_tag=ACYKJH_001398;product=disulfide bond formation protein DsbI;protein_id=HIH2189491.1;transl_table=11 DBLQKK010000021.1 tpg gene 16933 17361 . - . ID=gene-ACYKJH_001399;Name=ACYKJH_001399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001399 DBLQKK010000021.1 Protein Homology CDS 16933 17361 . - 0 ID=cds-HIH2189492.1;Parent=gene-ACYKJH_001399;Dbxref=NCBI_GP:HIH2189492.1;Name=HIH2189492.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: protein motif:HMM:NF025054.6;locus_tag=ACYKJH_001399;product=GNAT family N-acetyltransferase;protein_id=HIH2189492.1;transl_table=11 DBLQKK010000021.1 tpg gene 17364 18050 . - . ID=gene-ACYKJH_001400;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=ACYKJH_001400 DBLQKK010000021.1 Protein Homology CDS 17364 18050 . - 0 ID=cds-HIH2189493.1;Parent=gene-ACYKJH_001400;Dbxref=NCBI_GP:HIH2189493.1;Name=HIH2189493.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002837856.1;locus_tag=ACYKJH_001400;product=7-cyano-7-deazaguanine synthase QueC;protein_id=HIH2189493.1;transl_table=11 DBLQKK010000021.1 tpg gene 18127 19353 . + . ID=gene-ACYKJH_001401;Name=ACYKJH_001401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001401 DBLQKK010000021.1 Protein Homology CDS 18127 19353 . + 0 ID=cds-HIH2189494.1;Parent=gene-ACYKJH_001401;Dbxref=NCBI_GP:HIH2189494.1;Name=HIH2189494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343487.1;locus_tag=ACYKJH_001401;product=HD domain-containing protein;protein_id=HIH2189494.1;transl_table=11 DBLQKK010000021.1 tpg gene 19445 19969 . + . ID=gene-ACYKJH_001402;Name=ACYKJH_001402;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001402 DBLQKK010000021.1 Protein Homology CDS 19445 19969 . + 0 ID=cds-HIH2189495.1;Parent=gene-ACYKJH_001402;Dbxref=NCBI_GP:HIH2189495.1;Name=HIH2189495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343486.1;locus_tag=ACYKJH_001402;product=YagU family protein;protein_id=HIH2189495.1;transl_table=11 DBLQKK010000021.1 tpg gene 19981 21657 . - . ID=gene-ACYKJH_001403;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=ACYKJH_001403 DBLQKK010000021.1 Protein Homology CDS 19981 21657 . - 0 ID=cds-HIH2189496.1;Parent=gene-ACYKJH_001403;Dbxref=NCBI_GP:HIH2189496.1;Name=HIH2189496.1;Ontology_term=GO:0009082,GO:0004160,GO:0051536;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343485.1;locus_tag=ACYKJH_001403;product=dihydroxy-acid dehydratase;protein_id=HIH2189496.1;transl_table=11 DBLQKK010000021.1 tpg gene 21817 22464 . + . ID=gene-ACYKJH_001404;Name=rrc;gbkey=Gene;gene=rrc;gene_biotype=protein_coding;locus_tag=ACYKJH_001404 DBLQKK010000021.1 Protein Homology CDS 21817 22464 . + 0 ID=cds-HIH2189497.1;Parent=gene-ACYKJH_001404;Dbxref=NCBI_GP:HIH2189497.1;Name=HIH2189497.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;gene=rrc;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343484.1;locus_tag=ACYKJH_001404;product=ferritin family protein;protein_id=HIH2189497.1;transl_table=11 DBLQKK010000021.1 tpg gene 22529 22768 . + . ID=gene-ACYKJH_001405;Name=ACYKJH_001405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001405 DBLQKK010000021.1 Protein Homology CDS 22529 22768 . + 0 ID=cds-HIH2189498.1;Parent=gene-ACYKJH_001405;Dbxref=NCBI_GP:HIH2189498.1;Name=HIH2189498.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343483.1;locus_tag=ACYKJH_001405;product=ComEA family DNA-binding protein;protein_id=HIH2189498.1;transl_table=11 DBLQKK010000021.1 tpg gene 22801 23376 . + . ID=gene-ACYKJH_001406;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=ACYKJH_001406 DBLQKK010000021.1 Protein Homology CDS 22801 23376 . + 0 ID=cds-HIH2189499.1;Parent=gene-ACYKJH_001406;Dbxref=NCBI_GP:HIH2189499.1;Name=HIH2189499.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343482.1;locus_tag=ACYKJH_001406;product=ribonuclease HII;protein_id=HIH2189499.1;transl_table=11 DBLQKK010000021.1 tpg gene 23377 24822 . - . ID=gene-ACYKJH_001407;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=ACYKJH_001407 DBLQKK010000021.1 Protein Homology CDS 23377 24822 . - 0 ID=cds-HIH2189500.1;Parent=gene-ACYKJH_001407;Dbxref=NCBI_GP:HIH2189500.1;Name=HIH2189500.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343481.1;locus_tag=ACYKJH_001407;product=glutamate synthase subunit beta;protein_id=HIH2189500.1;transl_table=11 DBLQKK010000021.1 tpg gene 24832 29322 . - . ID=gene-ACYKJH_001408;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=ACYKJH_001408 DBLQKK010000021.1 Protein Homology CDS 24832 29322 . - 0 ID=cds-HIH2189501.1;Parent=gene-ACYKJH_001408;Dbxref=NCBI_GP:HIH2189501.1;Name=HIH2189501.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343479.1;locus_tag=ACYKJH_001408;product=glutamate synthase large subunit;protein_id=HIH2189501.1;transl_table=11 DBLQKK010000021.1 tpg gene 29456 30763 . - . ID=gene-ACYKJH_001409;Name=ACYKJH_001409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001409 DBLQKK010000021.1 Protein Homology CDS 29456 30763 . - 0 ID=cds-HIH2189502.1;Parent=gene-ACYKJH_001409;Dbxref=NCBI_GP:HIH2189502.1;Name=HIH2189502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343478.1;locus_tag=ACYKJH_001409;product=Na+/H+ antiporter family protein;protein_id=HIH2189502.1;transl_table=11 ##sequence-region DBLQKK010000022.1 1 30273 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000022.1 tpg region 1 30273 . + . ID=DBLQKK010000022.1:1..30273;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000022.1 tpg gene 47 742 . + . ID=gene-ACYKJH_001410;Name=ACYKJH_001410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001410 DBLQKK010000022.1 Protein Homology CDS 47 742 . + 0 ID=cds-HIH2189503.1;Parent=gene-ACYKJH_001410;Dbxref=NCBI_GP:HIH2189503.1;Name=HIH2189503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344118.1;locus_tag=ACYKJH_001410;product=chemotaxis protein;protein_id=HIH2189503.1;transl_table=11 DBLQKK010000022.1 tpg gene 739 1992 . + . ID=gene-ACYKJH_001411;Name=ACYKJH_001411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001411 DBLQKK010000022.1 Protein Homology CDS 739 1992 . + 0 ID=cds-HIH2189504.1;Parent=gene-ACYKJH_001411;Dbxref=NCBI_GP:HIH2189504.1;Name=HIH2189504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344119.1;locus_tag=ACYKJH_001411;product=peptidase U32 family protein;protein_id=HIH2189504.1;transl_table=11 DBLQKK010000022.1 tpg gene 1993 2487 . + . ID=gene-ACYKJH_001412;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=ACYKJH_001412 DBLQKK010000022.1 Protein Homology CDS 1993 2487 . + 0 ID=cds-HIH2189505.1;Parent=gene-ACYKJH_001412;Dbxref=NCBI_GP:HIH2189505.1;Name=HIH2189505.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344120.1;locus_tag=ACYKJH_001412;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=HIH2189505.1;transl_table=11 DBLQKK010000022.1 tpg gene 2497 3033 . + . ID=gene-ACYKJH_001413;Name=ACYKJH_001413;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001413 DBLQKK010000022.1 Protein Homology CDS 2497 3033 . + 0 ID=cds-HIH2189506.1;Parent=gene-ACYKJH_001413;Dbxref=NCBI_GP:HIH2189506.1;Name=HIH2189506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344121.1;locus_tag=ACYKJH_001413;product=DUF3972 domain-containing protein;protein_id=HIH2189506.1;transl_table=11 DBLQKK010000022.1 tpg gene 3045 3908 . + . ID=gene-ACYKJH_001414;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=ACYKJH_001414 DBLQKK010000022.1 Protein Homology CDS 3045 3908 . + 0 ID=cds-HIH2189507.1;Parent=gene-ACYKJH_001414;Dbxref=NCBI_GP:HIH2189507.1;Name=HIH2189507.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344122.1;locus_tag=ACYKJH_001414;product=glycine--tRNA ligase subunit alpha;protein_id=HIH2189507.1;transl_table=11 DBLQKK010000022.1 tpg gene 3895 4620 . + . ID=gene-ACYKJH_001415;Name=ACYKJH_001415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001415 DBLQKK010000022.1 Protein Homology CDS 3895 4620 . + 0 ID=cds-HIH2189508.1;Parent=gene-ACYKJH_001415;Dbxref=NCBI_GP:HIH2189508.1;Name=HIH2189508.1;Ontology_term=GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344123.1;locus_tag=ACYKJH_001415;product=Nif3-like dinuclear metal center hexameric protein;protein_id=HIH2189508.1;transl_table=11 DBLQKK010000022.1 tpg gene 4630 5346 . + . ID=gene-ACYKJH_001416;Name=ACYKJH_001416;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001416 DBLQKK010000022.1 Protein Homology CDS 4630 5346 . + 0 ID=cds-HIH2189509.1;Parent=gene-ACYKJH_001416;Dbxref=NCBI_GP:HIH2189509.1;Name=HIH2189509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344124.1;locus_tag=ACYKJH_001416;product=zinc ribbon domain-containing protein;protein_id=HIH2189509.1;transl_table=11 DBLQKK010000022.1 tpg gene 5343 6500 . + . ID=gene-ACYKJH_001417;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=ACYKJH_001417 DBLQKK010000022.1 Protein Homology CDS 5343 6500 . + 0 ID=cds-HIH2189510.1;Parent=gene-ACYKJH_001417;Dbxref=NCBI_GP:HIH2189510.1;Name=HIH2189510.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344125.1;locus_tag=ACYKJH_001417;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=HIH2189510.1;transl_table=11 DBLQKK010000022.1 tpg gene 6481 7233 . + . ID=gene-ACYKJH_001418;Name=ACYKJH_001418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001418 DBLQKK010000022.1 Protein Homology CDS 6481 7233 . + 0 ID=cds-HIH2189511.1;Parent=gene-ACYKJH_001418;Dbxref=NCBI_GP:HIH2189511.1;Name=HIH2189511.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344126.1;locus_tag=ACYKJH_001418;product=pseudouridine synthase;protein_id=HIH2189511.1;transl_table=11 DBLQKK010000022.1 tpg gene 7301 8638 . + . ID=gene-ACYKJH_001419;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=ACYKJH_001419 DBLQKK010000022.1 Protein Homology CDS 7301 8638 . + 0 ID=cds-HIH2189512.1;Parent=gene-ACYKJH_001419;Dbxref=NCBI_GP:HIH2189512.1;Name=HIH2189512.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344127.1;locus_tag=ACYKJH_001419;product=signal recognition particle protein;protein_id=HIH2189512.1;transl_table=11 DBLQKK010000022.1 tpg gene 8704 8931 . + . ID=gene-ACYKJH_001420;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=ACYKJH_001420 DBLQKK010000022.1 Protein Homology CDS 8704 8931 . + 0 ID=cds-HIH2189513.1;Parent=gene-ACYKJH_001420;Dbxref=NCBI_GP:HIH2189513.1;Name=HIH2189513.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344128.1;locus_tag=ACYKJH_001420;product=30S ribosomal protein S16;protein_id=HIH2189513.1;transl_table=11 DBLQKK010000022.1 tpg gene 8934 9176 . + . ID=gene-ACYKJH_001421;Name=ACYKJH_001421;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001421 DBLQKK010000022.1 Protein Homology CDS 8934 9176 . + 0 ID=cds-HIH2189514.1;Parent=gene-ACYKJH_001421;Dbxref=NCBI_GP:HIH2189514.1;Name=HIH2189514.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344129.1;locus_tag=ACYKJH_001421;product=KH domain-containing protein;protein_id=HIH2189514.1;transl_table=11 DBLQKK010000022.1 tpg gene 9169 9708 . + . ID=gene-ACYKJH_001422;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=ACYKJH_001422 DBLQKK010000022.1 Protein Homology CDS 9169 9708 . + 0 ID=cds-HIH2189515.1;Parent=gene-ACYKJH_001422;Dbxref=NCBI_GP:HIH2189515.1;Name=HIH2189515.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344130.1;locus_tag=ACYKJH_001422;product=ribosome maturation factor RimM;protein_id=HIH2189515.1;transl_table=11 DBLQKK010000022.1 tpg gene 9705 10409 . + . ID=gene-ACYKJH_001423;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=ACYKJH_001423 DBLQKK010000022.1 Protein Homology CDS 9705 10409 . + 0 ID=cds-HIH2189516.1;Parent=gene-ACYKJH_001423;Dbxref=NCBI_GP:HIH2189516.1;Name=HIH2189516.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344131.1;locus_tag=ACYKJH_001423;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=HIH2189516.1;transl_table=11 DBLQKK010000022.1 tpg gene 10420 10776 . + . ID=gene-ACYKJH_001424;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=ACYKJH_001424 DBLQKK010000022.1 Protein Homology CDS 10420 10776 . + 0 ID=cds-HIH2189517.1;Parent=gene-ACYKJH_001424;Dbxref=NCBI_GP:HIH2189517.1;Name=HIH2189517.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344132.1;locus_tag=ACYKJH_001424;product=50S ribosomal protein L19;protein_id=HIH2189517.1;transl_table=11 DBLQKK010000022.1 tpg gene 10909 11322 . + . ID=gene-ACYKJH_001425;Name=uraH;gbkey=Gene;gene=uraH;gene_biotype=protein_coding;locus_tag=ACYKJH_001425 DBLQKK010000022.1 Protein Homology CDS 10909 11322 . + 0 ID=cds-HIH2189518.1;Parent=gene-ACYKJH_001425;Dbxref=NCBI_GP:HIH2189518.1;Name=HIH2189518.1;Ontology_term=GO:0006144,GO:0033971;gbkey=CDS;gene=uraH;go_function=hydroxyisourate hydrolase activity|0033971||IEA;go_process=purine nucleobase metabolic process|0006144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344133.1;locus_tag=ACYKJH_001425;product=hydroxyisourate hydrolase;protein_id=HIH2189518.1;transl_table=11 DBLQKK010000022.1 tpg gene 11346 12686 . + . ID=gene-ACYKJH_001426;Name=ACYKJH_001426;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001426 DBLQKK010000022.1 Protein Homology CDS 11346 12686 . + 0 ID=cds-HIH2189519.1;Parent=gene-ACYKJH_001426;Dbxref=NCBI_GP:HIH2189519.1;Name=HIH2189519.1;Ontology_term=GO:0009073,GO:0009423,GO:0003849;gbkey=CDS;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344134.1;locus_tag=ACYKJH_001426;product=class II 3-deoxy-7-phosphoheptulonate synthase;protein_id=HIH2189519.1;transl_table=11 DBLQKK010000022.1 tpg gene 12683 13012 . + . ID=gene-ACYKJH_001427;Name=ACYKJH_001427;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001427 DBLQKK010000022.1 Protein Homology CDS 12683 13012 . + 0 ID=cds-HIH2189520.1;Parent=gene-ACYKJH_001427;Dbxref=NCBI_GP:HIH2189520.1;Name=HIH2189520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344135.1;locus_tag=ACYKJH_001427;product=ArsC/Spx/MgsR family protein;protein_id=HIH2189520.1;transl_table=11 DBLQKK010000022.1 tpg gene 13025 13267 . - . ID=gene-ACYKJH_001428;Name=ACYKJH_001428;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001428 DBLQKK010000022.1 Protein Homology CDS 13025 13267 . - 0 ID=cds-HIH2189521.1;Parent=gene-ACYKJH_001428;Dbxref=NCBI_GP:HIH2189521.1;Name=HIH2189521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_255349556.1;locus_tag=ACYKJH_001428;product=SelT/SelW/SelH family (seleno)protein;protein_id=HIH2189521.1;transl_except=(pos:complement(13235..13237)%2Caa:Sec);transl_table=11 DBLQKK010000022.1 tpg gene 13460 17062 . + . ID=gene-ACYKJH_001429;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=ACYKJH_001429 DBLQKK010000022.1 Protein Homology CDS 13460 17062 . + 0 ID=cds-HIH2189522.1;Parent=gene-ACYKJH_001429;Dbxref=NCBI_GP:HIH2189522.1;Name=HIH2189522.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344136.1;locus_tag=ACYKJH_001429;product=DNA polymerase III subunit alpha;protein_id=HIH2189522.1;transl_table=11 DBLQKK010000022.1 tpg gene 17074 17706 . - . ID=gene-ACYKJH_001430;Name=ACYKJH_001430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001430 DBLQKK010000022.1 Protein Homology CDS 17074 17706 . - 0 ID=cds-HIH2189523.1;Parent=gene-ACYKJH_001430;Dbxref=NCBI_GP:HIH2189523.1;Name=HIH2189523.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344137.1;locus_tag=ACYKJH_001430;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=HIH2189523.1;transl_table=11 DBLQKK010000022.1 tpg gene 17741 18490 . - . ID=gene-ACYKJH_001431;Name=flaC;gbkey=Gene;gene=flaC;gene_biotype=protein_coding;locus_tag=ACYKJH_001431 DBLQKK010000022.1 Protein Homology CDS 17741 18490 . - 0 ID=cds-HIH2189524.1;Parent=gene-ACYKJH_001431;Dbxref=NCBI_GP:HIH2189524.1;Name=HIH2189524.1;gbkey=CDS;gene=flaC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344138.1;locus_tag=ACYKJH_001431;product=flagellin C;protein_id=HIH2189524.1;transl_table=11 DBLQKK010000022.1 tpg gene 18529 18999 . - . ID=gene-ACYKJH_001432;Name=ACYKJH_001432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001432 DBLQKK010000022.1 Protein Homology CDS 18529 18999 . - 0 ID=cds-HIH2189525.1;Parent=gene-ACYKJH_001432;Dbxref=NCBI_GP:HIH2189525.1;Name=HIH2189525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344139.1;locus_tag=ACYKJH_001432;product=DUF4149 domain-containing protein;protein_id=HIH2189525.1;transl_table=11 DBLQKK010000022.1 tpg gene 19012 19827 . - . ID=gene-ACYKJH_001433;Name=ACYKJH_001433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001433 DBLQKK010000022.1 Protein Homology CDS 19012 19827 . - 0 ID=cds-HIH2189526.1;Parent=gene-ACYKJH_001433;Dbxref=NCBI_GP:HIH2189526.1;Name=HIH2189526.1;Ontology_term=GO:0032259,GO:0003676,GO:0008168,GO:1904047;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344140.1;locus_tag=ACYKJH_001433;product=HemK/PrmC family methyltransferase;protein_id=HIH2189526.1;transl_table=11 DBLQKK010000022.1 tpg gene 19824 21011 . - . ID=gene-ACYKJH_001434;Name=ACYKJH_001434;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001434 DBLQKK010000022.1 Protein Homology CDS 19824 21011 . - 0 ID=cds-HIH2189527.1;Parent=gene-ACYKJH_001434;Dbxref=NCBI_GP:HIH2189527.1;Name=HIH2189527.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344141.1;locus_tag=ACYKJH_001434;product=M48 family metallopeptidase;protein_id=HIH2189527.1;transl_table=11 DBLQKK010000022.1 tpg gene 21138 21323 . + . ID=gene-ACYKJH_001435;Name=ACYKJH_001435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001435 DBLQKK010000022.1 Protein Homology CDS 21138 21323 . + 0 ID=cds-HIH2189528.1;Parent=gene-ACYKJH_001435;Dbxref=NCBI_GP:HIH2189528.1;Name=HIH2189528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344142.1;locus_tag=ACYKJH_001435;product=molybdenum cofactor biosynthesis protein;protein_id=HIH2189528.1;transl_table=11 DBLQKK010000022.1 tpg gene 21320 21862 . - . ID=gene-ACYKJH_001436;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=ACYKJH_001436 DBLQKK010000022.1 Protein Homology CDS 21320 21862 . - 0 ID=cds-HIH2189529.1;Parent=gene-ACYKJH_001436;Dbxref=NCBI_GP:HIH2189529.1;Name=HIH2189529.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344143.1;locus_tag=ACYKJH_001436;product=molybdopterin adenylyltransferase;protein_id=HIH2189529.1;transl_table=11 DBLQKK010000022.1 tpg gene 21883 22866 . - . ID=gene-ACYKJH_001437;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=ACYKJH_001437 DBLQKK010000022.1 Protein Homology CDS 21883 22866 . - 0 ID=cds-HIH2189530.1;Parent=gene-ACYKJH_001437;Dbxref=NCBI_GP:HIH2189530.1;Name=HIH2189530.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344144.1;locus_tag=ACYKJH_001437;product=magnesium/cobalt transporter CorA;protein_id=HIH2189530.1;transl_table=11 DBLQKK010000022.1 tpg gene 22983 24029 . + . ID=gene-ACYKJH_001438;Name=ACYKJH_001438;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001438 DBLQKK010000022.1 Protein Homology CDS 22983 24029 . + 0 ID=cds-HIH2189531.1;Parent=gene-ACYKJH_001438;Dbxref=NCBI_GP:HIH2189531.1;Name=HIH2189531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344145.1;locus_tag=ACYKJH_001438;product=ABC transporter substrate-binding protein;protein_id=HIH2189531.1;transl_table=11 DBLQKK010000022.1 tpg gene 24040 25365 . + . ID=gene-ACYKJH_001439;Name=ACYKJH_001439;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001439 DBLQKK010000022.1 Protein Homology CDS 24040 25365 . + 0 ID=cds-HIH2189532.1;Parent=gene-ACYKJH_001439;Dbxref=NCBI_GP:HIH2189532.1;Name=HIH2189532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344146.1;locus_tag=ACYKJH_001439;product=esterase-like activity of phytase family protein;protein_id=HIH2189532.1;transl_table=11 DBLQKK010000022.1 tpg gene 25362 26171 . + . ID=gene-ACYKJH_001440;Name=ACYKJH_001440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001440 DBLQKK010000022.1 Protein Homology CDS 25362 26171 . + 0 ID=cds-HIH2189533.1;Parent=gene-ACYKJH_001440;Dbxref=NCBI_GP:HIH2189533.1;Name=HIH2189533.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344147.1;locus_tag=ACYKJH_001440;product=alkaline phosphatase family protein;protein_id=HIH2189533.1;transl_table=11 DBLQKK010000022.1 tpg gene 26168 27007 . + . ID=gene-ACYKJH_001441;Name=ACYKJH_001441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001441 DBLQKK010000022.1 Protein Homology CDS 26168 27007 . + 0 ID=cds-HIH2189534.1;Parent=gene-ACYKJH_001441;Dbxref=NCBI_GP:HIH2189534.1;Name=HIH2189534.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344148.1;locus_tag=ACYKJH_001441;product=ABC transporter permease;protein_id=HIH2189534.1;transl_table=11 DBLQKK010000022.1 tpg pseudogene 27008 27786 . + . ID=gene-ACYKJH_001442;Name=ACYKJH_001442;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001442;pseudo=true DBLQKK010000022.1 Protein Homology CDS 27008 27786 . + 0 ID=cds-ACYKJH_001442;Parent=gene-ACYKJH_001442;Note=frameshifted;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344149.1;locus_tag=ACYKJH_001442;product=ABC transporter permease;pseudo=true;transl_table=11 DBLQKK010000022.1 tpg gene 27790 28779 . + . ID=gene-ACYKJH_001443;Name=ACYKJH_001443;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001443 DBLQKK010000022.1 Protein Homology CDS 27790 28779 . + 0 ID=cds-HIH2189535.1;Parent=gene-ACYKJH_001443;Dbxref=NCBI_GP:HIH2189535.1;Name=HIH2189535.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344150.1;locus_tag=ACYKJH_001443;product=ABC transporter ATP-binding protein;protein_id=HIH2189535.1;transl_table=11 DBLQKK010000022.1 tpg gene 28776 29414 . + . ID=gene-ACYKJH_001444;Name=ACYKJH_001444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001444 DBLQKK010000022.1 Protein Homology CDS 28776 29414 . + 0 ID=cds-HIH2189536.1;Parent=gene-ACYKJH_001444;Dbxref=NCBI_GP:HIH2189536.1;Name=HIH2189536.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344151.1;locus_tag=ACYKJH_001444;product=HAD family hydrolase;protein_id=HIH2189536.1;transl_table=11 DBLQKK010000022.1 tpg gene 29438 30193 . - . ID=gene-ACYKJH_001445;Name=ACYKJH_001445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001445 DBLQKK010000022.1 Protein Homology CDS 29438 30193 . - 0 ID=cds-HIH2189537.1;Parent=gene-ACYKJH_001445;Dbxref=NCBI_GP:HIH2189537.1;Name=HIH2189537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344152.1;locus_tag=ACYKJH_001445;product=basic amino acid ABC transporter substrate-binding protein;protein_id=HIH2189537.1;transl_table=11 ##sequence-region DBLQKK010000023.1 1 25452 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000023.1 tpg region 1 25452 . + . ID=DBLQKK010000023.1:1..25452;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000023.1 tpg gene 1 511 . - . ID=gene-ACYKJH_001446;Name=ACYKJH_001446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001446;partial=true;start_range=.,1 DBLQKK010000023.1 Protein Homology CDS 1 511 . - 0 ID=cds-HIH2189538.1;Parent=gene-ACYKJH_001446;Dbxref=NCBI_GP:HIH2189538.1;Name=HIH2189538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344628.1;locus_tag=ACYKJH_001446;partial=true;product=Ppx/GppA family phosphatase;protein_id=HIH2189538.1;start_range=.,1;transl_table=11 DBLQKK010000023.1 tpg gene 567 1355 . + . ID=gene-ACYKJH_001447;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=ACYKJH_001447 DBLQKK010000023.1 Protein Homology CDS 567 1355 . + 0 ID=cds-HIH2189539.1;Parent=gene-ACYKJH_001447;Dbxref=NCBI_GP:HIH2189539.1;Name=HIH2189539.1;gbkey=CDS;gene=pdxJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002856096.1;locus_tag=ACYKJH_001447;product=pyridoxine 5'-phosphate synthase;protein_id=HIH2189539.1;transl_table=11 DBLQKK010000023.1 tpg gene 1336 2430 . + . ID=gene-ACYKJH_001448;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=ACYKJH_001448 DBLQKK010000023.1 Protein Homology CDS 1336 2430 . + 0 ID=cds-HIH2189540.1;Parent=gene-ACYKJH_001448;Dbxref=NCBI_GP:HIH2189540.1;Name=HIH2189540.1;Ontology_term=GO:0051287;gbkey=CDS;gene=pdxA;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344630.1;locus_tag=ACYKJH_001448;product=4-hydroxythreonine-4-phosphate dehydrogenase;protein_id=HIH2189540.1;transl_table=11 DBLQKK010000023.1 tpg gene 2408 3037 . - . ID=gene-ACYKJH_001449;Name=ACYKJH_001449;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001449 DBLQKK010000023.1 Protein Homology CDS 2408 3037 . - 0 ID=cds-HIH2189541.1;Parent=gene-ACYKJH_001449;Dbxref=NCBI_GP:HIH2189541.1;Name=HIH2189541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002919757.1;locus_tag=ACYKJH_001449;product=hypothetical protein;protein_id=HIH2189541.1;transl_table=11 DBLQKK010000023.1 tpg gene 3133 4332 . + . ID=gene-ACYKJH_001450;Name=ACYKJH_001450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001450 DBLQKK010000023.1 Protein Homology CDS 3133 4332 . + 0 ID=cds-HIH2189542.1;Parent=gene-ACYKJH_001450;Dbxref=NCBI_GP:HIH2189542.1;Name=HIH2189542.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344632.1;locus_tag=ACYKJH_001450;product=MFS transporter;protein_id=HIH2189542.1;transl_table=11 DBLQKK010000023.1 tpg gene 4388 4708 . + . ID=gene-ACYKJH_001451;Name=ciaC;gbkey=Gene;gene=ciaC;gene_biotype=protein_coding;locus_tag=ACYKJH_001451 DBLQKK010000023.1 Protein Homology CDS 4388 4708 . + 0 ID=cds-HIH2189543.1;Parent=gene-ACYKJH_001451;Dbxref=NCBI_GP:HIH2189543.1;Name=HIH2189543.1;gbkey=CDS;gene=ciaC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344633.1;locus_tag=ACYKJH_001451;product=invasion antigen CiaC;protein_id=HIH2189543.1;transl_table=11 DBLQKK010000023.1 tpg gene 4892 5914 . + . ID=gene-ACYKJH_001452;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=ACYKJH_001452 DBLQKK010000023.1 Protein Homology CDS 4892 5914 . + 0 ID=cds-HIH2189544.1;Parent=gene-ACYKJH_001452;Dbxref=NCBI_GP:HIH2189544.1;Name=HIH2189544.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344634.1;locus_tag=ACYKJH_001452;product=uroporphyrinogen decarboxylase;protein_id=HIH2189544.1;transl_table=11 DBLQKK010000023.1 tpg gene 5911 6813 . + . ID=gene-ACYKJH_001453;Name=ACYKJH_001453;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001453 DBLQKK010000023.1 Protein Homology CDS 5911 6813 . + 0 ID=cds-HIH2189545.1;Parent=gene-ACYKJH_001453;Dbxref=NCBI_GP:HIH2189545.1;Name=HIH2189545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344635.1;locus_tag=ACYKJH_001453;product=radical SAM protein;protein_id=HIH2189545.1;transl_table=11 DBLQKK010000023.1 tpg gene 6810 8006 . - . ID=gene-ACYKJH_001454;Name=ACYKJH_001454;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001454 DBLQKK010000023.1 Protein Homology CDS 6810 8006 . - 0 ID=cds-HIH2189546.1;Parent=gene-ACYKJH_001454;Dbxref=NCBI_GP:HIH2189546.1;Name=HIH2189546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344636.1;locus_tag=ACYKJH_001454;product=hypothetical protein;protein_id=HIH2189546.1;transl_table=11 DBLQKK010000023.1 tpg gene 8008 9810 . - . ID=gene-ACYKJH_001455;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=ACYKJH_001455 DBLQKK010000023.1 Protein Homology CDS 8008 9810 . - 0 ID=cds-HIH2189547.1;Parent=gene-ACYKJH_001455;Dbxref=NCBI_GP:HIH2189547.1;Name=HIH2189547.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344637.1;locus_tag=ACYKJH_001455;product=excinuclease ABC subunit UvrC;protein_id=HIH2189547.1;transl_table=11 DBLQKK010000023.1 tpg gene 9803 10297 . - . ID=gene-ACYKJH_001456;Name=ACYKJH_001456;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001456 DBLQKK010000023.1 Protein Homology CDS 9803 10297 . - 0 ID=cds-HIH2189548.1;Parent=gene-ACYKJH_001456;Dbxref=NCBI_GP:HIH2189548.1;Name=HIH2189548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344638.1;locus_tag=ACYKJH_001456;product=hypothetical protein;protein_id=HIH2189548.1;transl_table=11 DBLQKK010000023.1 tpg gene 10436 11971 . + . ID=gene-ACYKJH_001457;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=ACYKJH_001457 DBLQKK010000023.1 Protein Homology CDS 10436 11971 . + 0 ID=cds-HIH2189549.1;Parent=gene-ACYKJH_001457;Dbxref=NCBI_GP:HIH2189549.1;Name=HIH2189549.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344639.1;locus_tag=ACYKJH_001457;product=glutamine-hydrolyzing GMP synthase;protein_id=HIH2189549.1;transl_table=11 DBLQKK010000023.1 tpg gene 12058 13518 . + . ID=gene-ACYKJH_001458;Name=ACYKJH_001458;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001458 DBLQKK010000023.1 Protein Homology CDS 12058 13518 . + 0 ID=cds-HIH2189550.1;Parent=gene-ACYKJH_001458;Dbxref=NCBI_GP:HIH2189550.1;Name=HIH2189550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344640.1;locus_tag=ACYKJH_001458;product=hypothetical protein;protein_id=HIH2189550.1;transl_table=11 DBLQKK010000023.1 tpg gene 13758 15008 . + . ID=gene-ACYKJH_001459;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=ACYKJH_001459 DBLQKK010000023.1 Protein Homology CDS 13758 15008 . + 0 ID=cds-HIH2189551.1;Parent=gene-ACYKJH_001459;Dbxref=NCBI_GP:HIH2189551.1;Name=HIH2189551.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344641.1;locus_tag=ACYKJH_001459;product=phosphoribosylamine--glycine ligase;protein_id=HIH2189551.1;transl_table=11 DBLQKK010000023.1 tpg gene 15005 15457 . + . ID=gene-ACYKJH_001460;Name=ACYKJH_001460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001460 DBLQKK010000023.1 Protein Homology CDS 15005 15457 . + 0 ID=cds-HIH2189552.1;Parent=gene-ACYKJH_001460;Dbxref=NCBI_GP:HIH2189552.1;Name=HIH2189552.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344642.1;locus_tag=ACYKJH_001460;product=RDD family protein;protein_id=HIH2189552.1;transl_table=11 DBLQKK010000023.1 tpg gene 15447 17495 . + . ID=gene-ACYKJH_001461;Name=ACYKJH_001461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001461 DBLQKK010000023.1 Protein Homology CDS 15447 17495 . + 0 ID=cds-HIH2189553.1;Parent=gene-ACYKJH_001461;Dbxref=NCBI_GP:HIH2189553.1;Name=HIH2189553.1;Ontology_term=GO:0015920;gbkey=CDS;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344643.1;locus_tag=ACYKJH_001461;product=LPS-assembly protein LptD;protein_id=HIH2189553.1;transl_table=11 DBLQKK010000023.1 tpg gene 17565 19724 . + . ID=gene-ACYKJH_001462;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=ACYKJH_001462 DBLQKK010000023.1 Protein Homology CDS 17565 19724 . + 0 ID=cds-HIH2189554.1;Parent=gene-ACYKJH_001462;Dbxref=NCBI_GP:HIH2189554.1;Name=HIH2189554.1;Ontology_term=GO:0006396,GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=RNA processing|0006396||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344644.1;locus_tag=ACYKJH_001462;product=polyribonucleotide nucleotidyltransferase;protein_id=HIH2189554.1;transl_table=11 DBLQKK010000023.1 tpg gene 19721 20203 . + . ID=gene-ACYKJH_001463;Name=ACYKJH_001463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001463 DBLQKK010000023.1 Protein Homology CDS 19721 20203 . + 0 ID=cds-HIH2189555.1;Parent=gene-ACYKJH_001463;Dbxref=NCBI_GP:HIH2189555.1;Name=HIH2189555.1;Ontology_term=GO:0006285,GO:0033958;gbkey=CDS;go_function=DNA-deoxyinosine glycosylase activity|0033958||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344645.1;locus_tag=ACYKJH_001463;product=DNA-deoxyinosine glycosylase;protein_id=HIH2189555.1;transl_table=11 DBLQKK010000023.1 tpg gene 20247 20909 . - . ID=gene-ACYKJH_001464;Name=ACYKJH_001464;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001464 DBLQKK010000023.1 Protein Homology CDS 20247 20909 . - 0 ID=cds-HIH2189556.1;Parent=gene-ACYKJH_001464;Dbxref=NCBI_GP:HIH2189556.1;Name=HIH2189556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344647.1;locus_tag=ACYKJH_001464;product=DUF4230 domain-containing protein;protein_id=HIH2189556.1;transl_table=11 DBLQKK010000023.1 tpg gene 20927 22111 . - . ID=gene-ACYKJH_001465;Name=ACYKJH_001465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001465 DBLQKK010000023.1 Protein Homology CDS 20927 22111 . - 0 ID=cds-HIH2189557.1;Parent=gene-ACYKJH_001465;Dbxref=NCBI_GP:HIH2189557.1;Name=HIH2189557.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344648.1;locus_tag=ACYKJH_001465;product=MFS transporter;protein_id=HIH2189557.1;transl_table=11 DBLQKK010000023.1 tpg gene 22165 22620 . + . ID=gene-ACYKJH_001466;Name=ACYKJH_001466;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001466 DBLQKK010000023.1 Protein Homology CDS 22165 22620 . + 0 ID=cds-HIH2189558.1;Parent=gene-ACYKJH_001466;Dbxref=NCBI_GP:HIH2189558.1;Name=HIH2189558.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344649.1;locus_tag=ACYKJH_001466;product=low molecular weight protein-tyrosine-phosphatase;protein_id=HIH2189558.1;transl_table=11 DBLQKK010000023.1 tpg gene 22872 24167 . + . ID=gene-ACYKJH_001467;Name=porA;gbkey=Gene;gene=porA;gene_biotype=protein_coding;locus_tag=ACYKJH_001467 DBLQKK010000023.1 Protein Homology CDS 22872 24167 . + 0 ID=cds-HIH2189559.1;Parent=gene-ACYKJH_001467;Dbxref=NCBI_GP:HIH2189559.1;Name=HIH2189559.1;gbkey=CDS;gene=porA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_052795691.1;locus_tag=ACYKJH_001467;product=group 2 major outer membrane porin protein PorA;protein_id=HIH2189559.1;transl_table=11 DBLQKK010000023.1 tpg gene 24283 25404 . - . ID=gene-ACYKJH_001468;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=ACYKJH_001468 DBLQKK010000023.1 Protein Homology CDS 24283 25404 . - 0 ID=cds-HIH2189560.1;Parent=gene-ACYKJH_001468;Dbxref=NCBI_GP:HIH2189560.1;Name=HIH2189560.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344651.1;locus_tag=ACYKJH_001468;product=molecular chaperone DnaJ;protein_id=HIH2189560.1;transl_table=11 ##sequence-region DBLQKK010000024.1 1 25218 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000024.1 tpg region 1 25218 . + . ID=DBLQKK010000024.1:1..25218;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000024.1 tpg gene 1 817 . - . ID=gene-ACYKJH_001469;Name=ACYKJH_001469;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001469;partial=true;start_range=.,1 DBLQKK010000024.1 Protein Homology CDS 1 817 . - 0 ID=cds-HIH2189561.1;Parent=gene-ACYKJH_001469;Dbxref=NCBI_GP:HIH2189561.1;Name=HIH2189561.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014517064.1;locus_tag=ACYKJH_001469;partial=true;product=glycosyltransferase family 2 protein;protein_id=HIH2189561.1;start_range=.,1;transl_table=11 DBLQKK010000024.1 tpg gene 876 1835 . + . ID=gene-ACYKJH_001470;Name=waaF;gbkey=Gene;gene=waaF;gene_biotype=protein_coding;locus_tag=ACYKJH_001470 DBLQKK010000024.1 Protein Homology CDS 876 1835 . + 0 ID=cds-HIH2189562.1;Parent=gene-ACYKJH_001470;Dbxref=NCBI_GP:HIH2189562.1;Name=HIH2189562.1;Ontology_term=GO:0009103,GO:0008920,GO:0016757;gbkey=CDS;gene=waaF;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA,glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344539.1;locus_tag=ACYKJH_001470;product=lipopolysaccharide heptosyltransferase II;protein_id=HIH2189562.1;transl_table=11 DBLQKK010000024.1 tpg gene 1816 2376 . - . ID=gene-ACYKJH_001471;Name=gmhA;gbkey=Gene;gene=gmhA;gene_biotype=protein_coding;locus_tag=ACYKJH_001471 DBLQKK010000024.1 Protein Homology CDS 1816 2376 . - 0 ID=cds-HIH2189563.1;Parent=gene-ACYKJH_001471;Dbxref=NCBI_GP:HIH2189563.1;Name=HIH2189563.1;Ontology_term=GO:0009244,GO:0008968;gbkey=CDS;gene=gmhA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344540.1;locus_tag=ACYKJH_001471;product=D-sedoheptulose 7-phosphate isomerase;protein_id=HIH2189563.1;transl_table=11 DBLQKK010000024.1 tpg gene 2373 3758 . - . ID=gene-ACYKJH_001472;Name=rfaE1;gbkey=Gene;gene=rfaE1;gene_biotype=protein_coding;locus_tag=ACYKJH_001472 DBLQKK010000024.1 Protein Homology CDS 2373 3758 . - 0 ID=cds-HIH2189564.1;Parent=gene-ACYKJH_001472;Dbxref=NCBI_GP:HIH2189564.1;Name=HIH2189564.1;Ontology_term=GO:0005975,GO:0016773,GO:0016779;gbkey=CDS;gene=rfaE1;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA,nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012661208.1;locus_tag=ACYKJH_001472;product=D-glycero-beta-D-manno-heptose-7-phosphate kinase;protein_id=HIH2189564.1;transl_table=11 DBLQKK010000024.1 tpg gene 3751 4704 . - . ID=gene-ACYKJH_001473;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=ACYKJH_001473 DBLQKK010000024.1 Protein Homology CDS 3751 4704 . - 0 ID=cds-HIH2189565.1;Parent=gene-ACYKJH_001473;Dbxref=NCBI_GP:HIH2189565.1;Name=HIH2189565.1;Ontology_term=GO:0005975,GO:0009244,GO:0008712,GO:0050661;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA,NADP binding|0050661||IEA;go_process=carbohydrate metabolic process|0005975||IEA,lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344542.1;locus_tag=ACYKJH_001473;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=HIH2189565.1;transl_table=11 DBLQKK010000024.1 tpg pseudogene 4705 5266 . - . ID=gene-ACYKJH_001474;Name=ACYKJH_001474;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001474;pseudo=true DBLQKK010000024.1 Protein Homology CDS 4705 5266 . - 0 ID=cds-ACYKJH_001474;Parent=gene-ACYKJH_001474;Note=frameshifted;Ontology_term=GO:0034200,GO:0046872;gbkey=CDS;go_function=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase activity|0034200||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344543.1;locus_tag=ACYKJH_001474;product=D-glycero-alpha-D-manno-heptose-1%2C7-bisphosphate 7-phosphatase;pseudo=true;transl_table=11 DBLQKK010000024.1 tpg gene 5347 5649 . + . ID=gene-ACYKJH_001475;Name=ACYKJH_001475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001475 DBLQKK010000024.1 Protein Homology CDS 5347 5649 . + 0 ID=cds-HIH2189566.1;Parent=gene-ACYKJH_001475;Dbxref=NCBI_GP:HIH2189566.1;Name=HIH2189566.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344544.1;locus_tag=ACYKJH_001475;product=c-type cytochrome;protein_id=HIH2189566.1;transl_table=11 DBLQKK010000024.1 tpg gene 5672 5878 . - . ID=gene-ACYKJH_001476;Name=ccoS;gbkey=Gene;gene=ccoS;gene_biotype=protein_coding;locus_tag=ACYKJH_001476 DBLQKK010000024.1 Protein Homology CDS 5672 5878 . - 0 ID=cds-HIH2189567.1;Parent=gene-ACYKJH_001476;Dbxref=NCBI_GP:HIH2189567.1;Name=HIH2189567.1;Ontology_term=GO:0008535;gbkey=CDS;gene=ccoS;go_process=respiratory chain complex IV assembly|0008535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344545.1;locus_tag=ACYKJH_001476;product=cbb3-type cytochrome oxidase assembly protein CcoS;protein_id=HIH2189567.1;transl_table=11 DBLQKK010000024.1 tpg gene 5875 8232 . - . ID=gene-ACYKJH_001477;Name=ACYKJH_001477;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001477 DBLQKK010000024.1 Protein Homology CDS 5875 8232 . - 0 ID=cds-HIH2189568.1;Parent=gene-ACYKJH_001477;Dbxref=NCBI_GP:HIH2189568.1;Name=HIH2189568.1;Ontology_term=GO:0006812,GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0042626,GO:0046872,GO:0140358,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,P-type transmembrane transporter activity|0140358||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344546.1;locus_tag=ACYKJH_001477;product=heavy metal translocating P-type ATPase;protein_id=HIH2189568.1;transl_table=11 DBLQKK010000024.1 tpg gene 8341 9639 . + . ID=gene-ACYKJH_001478;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=ACYKJH_001478 DBLQKK010000024.1 Protein Homology CDS 8341 9639 . + 0 ID=cds-HIH2189569.1;Parent=gene-ACYKJH_001478;Dbxref=NCBI_GP:HIH2189569.1;Name=HIH2189569.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344547.1;locus_tag=ACYKJH_001478;product=transcription termination factor Rho;protein_id=HIH2189569.1;transl_table=11 DBLQKK010000024.1 tpg gene 9643 11172 . + . ID=gene-ACYKJH_001479;Name=ACYKJH_001479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001479 DBLQKK010000024.1 Protein Homology CDS 9643 11172 . + 0 ID=cds-HIH2189570.1;Parent=gene-ACYKJH_001479;Dbxref=NCBI_GP:HIH2189570.1;Name=HIH2189570.1;Ontology_term=GO:0006260,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344548.1;locus_tag=ACYKJH_001479;product=DNA polymerase III subunit gamma/tau;protein_id=HIH2189570.1;transl_table=11 DBLQKK010000024.1 tpg gene 11169 11690 . - . ID=gene-ACYKJH_001480;Name=ACYKJH_001480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001480 DBLQKK010000024.1 Protein Homology CDS 11169 11690 . - 0 ID=cds-HIH2189571.1;Parent=gene-ACYKJH_001480;Dbxref=NCBI_GP:HIH2189571.1;Name=HIH2189571.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021453.6;locus_tag=ACYKJH_001480;product=DUF2165 family protein;protein_id=HIH2189571.1;transl_table=11 DBLQKK010000024.1 tpg gene 11762 13861 . - . ID=gene-ACYKJH_001481;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=ACYKJH_001481 DBLQKK010000024.1 Protein Homology CDS 11762 13861 . - 0 ID=cds-HIH2189572.1;Parent=gene-ACYKJH_001481;Dbxref=NCBI_GP:HIH2189572.1;Name=HIH2189572.1;gbkey=CDS;gene=copA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344552.1;locus_tag=ACYKJH_001481;product=copper-translocating P-type ATPase CopA;protein_id=HIH2189572.1;transl_table=11 DBLQKK010000024.1 tpg gene 13861 14055 . - . ID=gene-ACYKJH_001482;Name=ACYKJH_001482;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001482 DBLQKK010000024.1 Protein Homology CDS 13861 14055 . - 0 ID=cds-HIH2189573.1;Parent=gene-ACYKJH_001482;Dbxref=NCBI_GP:HIH2189573.1;Name=HIH2189573.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344553.1;locus_tag=ACYKJH_001482;product=heavy-metal-associated domain-containing protein;protein_id=HIH2189573.1;transl_table=11 DBLQKK010000024.1 tpg gene 14045 14995 . - . ID=gene-ACYKJH_001483;Name=czcD;gbkey=Gene;gene=czcD;gene_biotype=protein_coding;locus_tag=ACYKJH_001483 DBLQKK010000024.1 Protein Homology CDS 14045 14995 . - 0 ID=cds-HIH2189574.1;Parent=gene-ACYKJH_001483;Dbxref=NCBI_GP:HIH2189574.1;Name=HIH2189574.1;gbkey=CDS;gene=czcD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344554.1;locus_tag=ACYKJH_001483;product=CDF family cation-efflux transporter CzcD;protein_id=HIH2189574.1;transl_table=11 DBLQKK010000024.1 tpg gene 15070 15333 . - . ID=gene-ACYKJH_001484;Name=ACYKJH_001484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001484 DBLQKK010000024.1 Protein Homology CDS 15070 15333 . - 0 ID=cds-HIH2189575.1;Parent=gene-ACYKJH_001484;Dbxref=NCBI_GP:HIH2189575.1;Name=HIH2189575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344555.1;locus_tag=ACYKJH_001484;product=zf-TFIIB domain-containing protein;protein_id=HIH2189575.1;transl_table=11 DBLQKK010000024.1 tpg gene 15405 15899 . - . ID=gene-ACYKJH_001485;Name=ACYKJH_001485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001485 DBLQKK010000024.1 Protein Homology CDS 15405 15899 . - 0 ID=cds-HIH2189576.1;Parent=gene-ACYKJH_001485;Dbxref=NCBI_GP:HIH2189576.1;Name=HIH2189576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344556.1;locus_tag=ACYKJH_001485;product=threonine/serine exporter family protein;protein_id=HIH2189576.1;transl_table=11 DBLQKK010000024.1 tpg gene 15896 16672 . - . ID=gene-ACYKJH_001486;Name=ACYKJH_001486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001486 DBLQKK010000024.1 Protein Homology CDS 15896 16672 . - 0 ID=cds-HIH2189577.1;Parent=gene-ACYKJH_001486;Dbxref=NCBI_GP:HIH2189577.1;Name=HIH2189577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344557.1;locus_tag=ACYKJH_001486;product=threonine/serine exporter family protein;protein_id=HIH2189577.1;transl_table=11 DBLQKK010000024.1 tpg gene 16739 17665 . + . ID=gene-ACYKJH_001487;Name=ACYKJH_001487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001487 DBLQKK010000024.1 Protein Homology CDS 16739 17665 . + 0 ID=cds-HIH2189578.1;Parent=gene-ACYKJH_001487;Dbxref=NCBI_GP:HIH2189578.1;Name=HIH2189578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344558.1;locus_tag=ACYKJH_001487;product=L-lactate dehydrogenase;protein_id=HIH2189578.1;transl_table=11 DBLQKK010000024.1 tpg gene 17662 18264 . - . ID=gene-ACYKJH_001488;Name=ACYKJH_001488;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001488 DBLQKK010000024.1 Protein Homology CDS 17662 18264 . - 0 ID=cds-HIH2189579.1;Parent=gene-ACYKJH_001488;Dbxref=NCBI_GP:HIH2189579.1;Name=HIH2189579.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344559.1;locus_tag=ACYKJH_001488;product=DedA family protein;protein_id=HIH2189579.1;transl_table=11 DBLQKK010000024.1 tpg gene 18345 18572 . - . ID=gene-ACYKJH_001489;Name=ACYKJH_001489;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001489 DBLQKK010000024.1 Protein Homology CDS 18345 18572 . - 0 ID=cds-HIH2189580.1;Parent=gene-ACYKJH_001489;Dbxref=NCBI_GP:HIH2189580.1;Name=HIH2189580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344560.1;locus_tag=ACYKJH_001489;product=hypothetical protein;protein_id=HIH2189580.1;transl_table=11 DBLQKK010000024.1 tpg gene 18583 19983 . - . ID=gene-ACYKJH_001490;Name=omp50;gbkey=Gene;gene=omp50;gene_biotype=protein_coding;locus_tag=ACYKJH_001490 DBLQKK010000024.1 Protein Homology CDS 18583 19983 . - 0 ID=cds-HIH2189581.1;Parent=gene-ACYKJH_001490;Dbxref=NCBI_GP:HIH2189581.1;Name=HIH2189581.1;gbkey=CDS;gene=omp50;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344561.1;locus_tag=ACYKJH_001490;product=outer membrane tyrosine kinase;protein_id=HIH2189581.1;transl_table=11 DBLQKK010000024.1 tpg gene 20147 20629 . - . ID=gene-ACYKJH_001491;Name=ACYKJH_001491;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001491 DBLQKK010000024.1 Protein Homology CDS 20147 20629 . - 0 ID=cds-HIH2189582.1;Parent=gene-ACYKJH_001491;Dbxref=NCBI_GP:HIH2189582.1;Name=HIH2189582.1;Ontology_term=GO:0000413,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein peptidyl-prolyl isomerization|0000413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344562.1;locus_tag=ACYKJH_001491;product=peptidylprolyl isomerase;protein_id=HIH2189582.1;transl_table=11 DBLQKK010000024.1 tpg gene 20639 21346 . - . ID=gene-ACYKJH_001492;Name=ACYKJH_001492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001492 DBLQKK010000024.1 Protein Homology CDS 20639 21346 . - 0 ID=cds-HIH2189583.1;Parent=gene-ACYKJH_001492;Dbxref=NCBI_GP:HIH2189583.1;Name=HIH2189583.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344563.1;locus_tag=ACYKJH_001492;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=HIH2189583.1;transl_table=11 DBLQKK010000024.1 tpg gene 21455 21796 . + . ID=gene-ACYKJH_001493;Name=ACYKJH_001493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001493 DBLQKK010000024.1 Protein Homology CDS 21455 21796 . + 0 ID=cds-HIH2189584.1;Parent=gene-ACYKJH_001493;Dbxref=NCBI_GP:HIH2189584.1;Name=HIH2189584.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344564.1;locus_tag=ACYKJH_001493;product=DMT family transporter;protein_id=HIH2189584.1;transl_table=11 DBLQKK010000024.1 tpg gene 21796 22104 . + . ID=gene-ACYKJH_001494;Name=ACYKJH_001494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001494 DBLQKK010000024.1 Protein Homology CDS 21796 22104 . + 0 ID=cds-HIH2189585.1;Parent=gene-ACYKJH_001494;Dbxref=NCBI_GP:HIH2189585.1;Name=HIH2189585.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344565.1;locus_tag=ACYKJH_001494;product=DMT family transporter;protein_id=HIH2189585.1;transl_table=11 DBLQKK010000024.1 tpg gene 22122 23714 . - . ID=gene-ACYKJH_001495;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=ACYKJH_001495 DBLQKK010000024.1 Protein Homology CDS 22122 23714 . - 0 ID=cds-HIH2189586.1;Parent=gene-ACYKJH_001495;Dbxref=NCBI_GP:HIH2189586.1;Name=HIH2189586.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344566.1;locus_tag=ACYKJH_001495;product=arginine--tRNA ligase;protein_id=HIH2189586.1;transl_table=11 DBLQKK010000024.1 tpg gene 23726 23965 . - . ID=gene-ACYKJH_001496;Name=ACYKJH_001496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001496 DBLQKK010000024.1 Protein Homology CDS 23726 23965 . - 0 ID=cds-HIH2189587.1;Parent=gene-ACYKJH_001496;Dbxref=NCBI_GP:HIH2189587.1;Name=HIH2189587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344567.1;locus_tag=ACYKJH_001496;product=twin-arginine translocase TatA/TatE family subunit;protein_id=HIH2189587.1;transl_table=11 DBLQKK010000024.1 tpg gene 23967 24590 . - . ID=gene-ACYKJH_001497;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=ACYKJH_001497 DBLQKK010000024.1 Protein Homology CDS 23967 24590 . - 0 ID=cds-HIH2189588.1;Parent=gene-ACYKJH_001497;Dbxref=NCBI_GP:HIH2189588.1;Name=HIH2189588.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344568.1;locus_tag=ACYKJH_001497;product=guanylate kinase;protein_id=HIH2189588.1;transl_table=11 DBLQKK010000024.1 tpg gene 24587 25218 . - . ID=gene-ACYKJH_001498;Name=ACYKJH_001498;end_range=25218,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001498;partial=true DBLQKK010000024.1 Protein Homology CDS 24587 25218 . - 2 ID=cds-HIH2189589.1;Parent=gene-ACYKJH_001498;Dbxref=NCBI_GP:HIH2189589.1;Name=HIH2189589.1;end_range=25218,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344569.1;locus_tag=ACYKJH_001498;partial=true;product=hypothetical protein;protein_id=HIH2189589.1;transl_table=11 ##sequence-region DBLQKK010000025.1 1 20920 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000025.1 tpg region 1 20920 . + . ID=DBLQKK010000025.1:1..20920;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000025.1 tpg gene 15 1010 . - . ID=gene-ACYKJH_001499;Name=tupC;gbkey=Gene;gene=tupC;gene_biotype=protein_coding;locus_tag=ACYKJH_001499 DBLQKK010000025.1 Protein Homology CDS 15 1010 . - 0 ID=cds-HIH2189590.1;Parent=gene-ACYKJH_001499;Dbxref=NCBI_GP:HIH2189590.1;Name=HIH2189590.1;Ontology_term=GO:0005524,GO:0016887,GO:1901238;gbkey=CDS;gene=tupC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type tungstate transporter activity|1901238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344910.1;locus_tag=ACYKJH_001499;product=tungstate ABC transporter ATP-binding protein TupC;protein_id=HIH2189590.1;transl_table=11 DBLQKK010000025.1 tpg gene 1012 1698 . - . ID=gene-ACYKJH_001500;Name=tupB;gbkey=Gene;gene=tupB;gene_biotype=protein_coding;locus_tag=ACYKJH_001500 DBLQKK010000025.1 Protein Homology CDS 1012 1698 . - 0 ID=cds-HIH2189591.1;Parent=gene-ACYKJH_001500;Dbxref=NCBI_GP:HIH2189591.1;Name=HIH2189591.1;Ontology_term=GO:1901238;gbkey=CDS;gene=tupB;go_function=ABC-type tungstate transporter activity|1901238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002874119.1;locus_tag=ACYKJH_001500;product=tungstate ABC transporter permease TupB;protein_id=HIH2189591.1;transl_table=11 DBLQKK010000025.1 tpg gene 1777 2586 . + . ID=gene-ACYKJH_001501;Name=tupA;gbkey=Gene;gene=tupA;gene_biotype=protein_coding;locus_tag=ACYKJH_001501 DBLQKK010000025.1 Protein Homology CDS 1777 2586 . + 0 ID=cds-HIH2189592.1;Parent=gene-ACYKJH_001501;Dbxref=NCBI_GP:HIH2189592.1;Name=HIH2189592.1;Ontology_term=GO:1901238;gbkey=CDS;gene=tupA;go_function=ABC-type tungstate transporter activity|1901238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344912.1;locus_tag=ACYKJH_001501;product=tungstate ABC transporter substrate-binding protein TupA;protein_id=HIH2189592.1;transl_table=11 DBLQKK010000025.1 tpg gene 2728 3495 . + . ID=gene-ACYKJH_001502;Name=ACYKJH_001502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001502 DBLQKK010000025.1 Protein Homology CDS 2728 3495 . + 0 ID=cds-HIH2189593.1;Parent=gene-ACYKJH_001502;Dbxref=NCBI_GP:HIH2189593.1;Name=HIH2189593.1;Ontology_term=GO:0005975,GO:0005524,GO:0016810,GO:0017168;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344913.1;locus_tag=ACYKJH_001502;product=LamB/YcsF family protein;protein_id=HIH2189593.1;transl_table=11 DBLQKK010000025.1 tpg gene 3505 4245 . + . ID=gene-ACYKJH_001503;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=ACYKJH_001503 DBLQKK010000025.1 Protein Homology CDS 3505 4245 . + 0 ID=cds-HIH2189594.1;Parent=gene-ACYKJH_001503;Dbxref=NCBI_GP:HIH2189594.1;Name=HIH2189594.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344914.1;locus_tag=ACYKJH_001503;product=5-oxoprolinase subunit PxpB;protein_id=HIH2189594.1;transl_table=11 DBLQKK010000025.1 tpg gene 4226 5191 . + . ID=gene-ACYKJH_001504;Name=ACYKJH_001504;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001504 DBLQKK010000025.1 Protein Homology CDS 4226 5191 . + 0 ID=cds-HIH2189595.1;Parent=gene-ACYKJH_001504;Dbxref=NCBI_GP:HIH2189595.1;Name=HIH2189595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344915.1;locus_tag=ACYKJH_001504;product=biotin-dependent carboxyltransferase family protein;protein_id=HIH2189595.1;transl_table=11 DBLQKK010000025.1 tpg gene 5188 6084 . - . ID=gene-ACYKJH_001505;Name=ACYKJH_001505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001505 DBLQKK010000025.1 Protein Homology CDS 5188 6084 . - 0 ID=cds-HIH2189596.1;Parent=gene-ACYKJH_001505;Dbxref=NCBI_GP:HIH2189596.1;Name=HIH2189596.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344916.1;locus_tag=ACYKJH_001505;product=DMT family transporter;protein_id=HIH2189596.1;transl_table=11 DBLQKK010000025.1 tpg gene 6117 6695 . - . ID=gene-ACYKJH_001506;Name=ACYKJH_001506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001506 DBLQKK010000025.1 Protein Homology CDS 6117 6695 . - 0 ID=cds-HIH2189597.1;Parent=gene-ACYKJH_001506;Dbxref=NCBI_GP:HIH2189597.1;Name=HIH2189597.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344917.1;locus_tag=ACYKJH_001506;product=NAD(P)H-dependent oxidoreductase;protein_id=HIH2189597.1;transl_table=11 DBLQKK010000025.1 tpg gene 6795 7136 . + . ID=gene-ACYKJH_001507;Name=rrpA;gbkey=Gene;gene=rrpA;gene_biotype=protein_coding;locus_tag=ACYKJH_001507 DBLQKK010000025.1 Protein Homology CDS 6795 7136 . + 0 ID=cds-HIH2189598.1;Parent=gene-ACYKJH_001507;Dbxref=NCBI_GP:HIH2189598.1;Name=HIH2189598.1;gbkey=CDS;gene=rrpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002860673.1;locus_tag=ACYKJH_001507;product=MarR family transcription factor RrpA;protein_id=HIH2189598.1;transl_table=11 DBLQKK010000025.1 tpg gene 7137 7688 . + . ID=gene-ACYKJH_001508;Name=ACYKJH_001508;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001508 DBLQKK010000025.1 GeneMarkS-2+ CDS 7137 7688 . + 0 ID=cds-HIH2189599.1;Parent=gene-ACYKJH_001508;Dbxref=NCBI_GP:HIH2189599.1;Name=HIH2189599.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_001508;product=hypothetical protein;protein_id=HIH2189599.1;transl_table=11 DBLQKK010000025.1 tpg gene 7691 8767 . - . ID=gene-ACYKJH_001509;Name=ACYKJH_001509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001509 DBLQKK010000025.1 Protein Homology CDS 7691 8767 . - 0 ID=cds-HIH2189600.1;Parent=gene-ACYKJH_001509;Dbxref=NCBI_GP:HIH2189600.1;Name=HIH2189600.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344920.1;locus_tag=ACYKJH_001509;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=HIH2189600.1;transl_table=11 DBLQKK010000025.1 tpg gene 8898 11207 . + . ID=gene-ACYKJH_001510;Name=hsdR;gbkey=Gene;gene=hsdR;gene_biotype=protein_coding;locus_tag=ACYKJH_001510 DBLQKK010000025.1 Protein Homology CDS 8898 11207 . + 0 ID=cds-HIH2189601.1;Parent=gene-ACYKJH_001510;Dbxref=NCBI_GP:HIH2189601.1;Name=HIH2189601.1;Ontology_term=GO:0009307,GO:0003678,GO:0015666;gbkey=CDS;gene=hsdR;go_function=DNA helicase activity|0003678||IEA,restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002858906.1;locus_tag=ACYKJH_001510;product=EcoAI/FtnUII family type I restriction enzme subunit R;protein_id=HIH2189601.1;transl_table=11 DBLQKK010000025.1 tpg gene 11211 13613 . + . ID=gene-ACYKJH_001511;Name=ACYKJH_001511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001511 DBLQKK010000025.1 Protein Homology CDS 11211 13613 . + 0 ID=cds-HIH2189602.1;Parent=gene-ACYKJH_001511;Dbxref=NCBI_GP:HIH2189602.1;Name=HIH2189602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002879924.1;locus_tag=ACYKJH_001511;product=AAA family ATPase;protein_id=HIH2189602.1;transl_table=11 DBLQKK010000025.1 tpg gene 13632 14876 . + . ID=gene-ACYKJH_001512;Name=ACYKJH_001512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001512 DBLQKK010000025.1 Protein Homology CDS 13632 14876 . + 0 ID=cds-HIH2189603.1;Parent=gene-ACYKJH_001512;Dbxref=NCBI_GP:HIH2189603.1;Name=HIH2189603.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020247170.1;locus_tag=ACYKJH_001512;product=restriction endonuclease subunit S;protein_id=HIH2189603.1;transl_table=11 DBLQKK010000025.1 tpg gene 15024 16508 . + . ID=gene-ACYKJH_001513;Name=ACYKJH_001513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001513 DBLQKK010000025.1 Protein Homology CDS 15024 16508 . + 0 ID=cds-HIH2189604.1;Parent=gene-ACYKJH_001513;Dbxref=NCBI_GP:HIH2189604.1;Name=HIH2189604.1;Ontology_term=GO:0009307,GO:0003677,GO:0008168,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011049998.1;locus_tag=ACYKJH_001513;product=type I restriction-modification system subunit M;protein_id=HIH2189604.1;transl_table=11 DBLQKK010000025.1 tpg gene 16586 17338 . - . ID=gene-ACYKJH_001514;Name=ACYKJH_001514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001514 DBLQKK010000025.1 Protein Homology CDS 16586 17338 . - 0 ID=cds-HIH2189605.1;Parent=gene-ACYKJH_001514;Dbxref=NCBI_GP:HIH2189605.1;Name=HIH2189605.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002860666.1;locus_tag=ACYKJH_001514;product=carboxymuconolactone decarboxylase family protein;protein_id=HIH2189605.1;transl_table=11 DBLQKK010000025.1 tpg pseudogene 17446 17864 . - . ID=gene-ACYKJH_001515;Name=ACYKJH_001515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001515;pseudo=true DBLQKK010000025.1 Protein Homology CDS 17446 17864 . - 0 ID=cds-ACYKJH_001515;Parent=gene-ACYKJH_001515;Note=frameshifted;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002873053.1;locus_tag=ACYKJH_001515;product=cupin domain-containing protein;pseudo=true;transl_table=11 DBLQKK010000025.1 tpg gene 17921 18796 . - . ID=gene-ACYKJH_001516;Name=ACYKJH_001516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001516 DBLQKK010000025.1 Protein Homology CDS 17921 18796 . - 0 ID=cds-HIH2189606.1;Parent=gene-ACYKJH_001516;Dbxref=NCBI_GP:HIH2189606.1;Name=HIH2189606.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002873054.1;locus_tag=ACYKJH_001516;product=MFS transporter;protein_id=HIH2189606.1;transl_table=11 DBLQKK010000025.1 tpg pseudogene 18972 19067 . - . ID=gene-ACYKJH_001517;Name=ACYKJH_001517;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001517;pseudo=true DBLQKK010000025.1 Protein Homology CDS 18972 19067 . - 0 ID=cds-ACYKJH_001517;Parent=gene-ACYKJH_001517;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344926.1;locus_tag=ACYKJH_001517;product=NAD(P)-dependent oxidoreductase;pseudo=true;transl_table=11 DBLQKK010000025.1 tpg pseudogene 19057 19161 . + . ID=gene-ACYKJH_001518;Name=ACYKJH_001518;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001518;pseudo=true DBLQKK010000025.1 Protein Homology CDS 19057 19161 . + 0 ID=cds-ACYKJH_001518;Parent=gene-ACYKJH_001518;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_129557825.1;locus_tag=ACYKJH_001518;product=permease;pseudo=true;transl_table=11 DBLQKK010000025.1 tpg gene 19171 19494 . + . ID=gene-ACYKJH_001519;Name=ACYKJH_001519;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001519 DBLQKK010000025.1 Protein Homology CDS 19171 19494 . + 0 ID=cds-HIH2189607.1;Parent=gene-ACYKJH_001519;Dbxref=NCBI_GP:HIH2189607.1;Name=HIH2189607.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002906233.1;locus_tag=ACYKJH_001519;product=ArsR/SmtB family transcription factor;protein_id=HIH2189607.1;transl_table=11 DBLQKK010000025.1 tpg pseudogene 19502 19932 . - . ID=gene-ACYKJH_001520;Name=ACYKJH_001520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001520;pseudo=true DBLQKK010000025.1 Protein Homology CDS 19502 19932 . - 0 ID=cds-ACYKJH_001520;Parent=gene-ACYKJH_001520;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344932.1;locus_tag=ACYKJH_001520;product=MerR family transcriptional regulator;pseudo=true;transl_table=11 DBLQKK010000025.1 tpg gene 20012 20920 . + . ID=gene-ACYKJH_001521;Name=ACYKJH_001521;end_range=20920,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001521;partial=true DBLQKK010000025.1 Protein Homology CDS 20012 20920 . + 0 ID=cds-HIH2189608.1;Parent=gene-ACYKJH_001521;Dbxref=NCBI_GP:HIH2189608.1;Name=HIH2189608.1;Ontology_term=GO:0007165;end_range=20920,.;gbkey=CDS;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344933.1;locus_tag=ACYKJH_001521;partial=true;product=cache domain-containing protein;protein_id=HIH2189608.1;transl_table=11 ##sequence-region DBLQKK010000026.1 1 17510 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000026.1 tpg region 1 17510 . + . ID=DBLQKK010000026.1:1..17510;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000026.1 tpg gene 131 1912 . + . ID=gene-ACYKJH_001522;Name=ACYKJH_001522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001522 DBLQKK010000026.1 Protein Homology CDS 131 1912 . + 0 ID=cds-HIH2189609.1;Parent=gene-ACYKJH_001522;Dbxref=NCBI_GP:HIH2189609.1;Name=HIH2189609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343605.1;locus_tag=ACYKJH_001522;product=PhoX family protein;protein_id=HIH2189609.1;transl_table=11 DBLQKK010000026.1 tpg gene 1950 2888 . - . ID=gene-ACYKJH_001523;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=ACYKJH_001523 DBLQKK010000026.1 Protein Homology CDS 1950 2888 . - 0 ID=cds-HIH2189610.1;Parent=gene-ACYKJH_001523;Dbxref=NCBI_GP:HIH2189610.1;Name=HIH2189610.1;Ontology_term=GO:0019430,GO:0004791,GO:0071949,GO:0005737;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||IEA;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA,FAD binding|0071949||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343606.1;locus_tag=ACYKJH_001523;product=thioredoxin-disulfide reductase;protein_id=HIH2189610.1;transl_table=11 DBLQKK010000026.1 tpg gene 3022 3336 . - . ID=gene-ACYKJH_001524;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=ACYKJH_001524 DBLQKK010000026.1 Protein Homology CDS 3022 3336 . - 0 ID=cds-HIH2189611.1;Parent=gene-ACYKJH_001524;Dbxref=NCBI_GP:HIH2189611.1;Name=HIH2189611.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343607.1;locus_tag=ACYKJH_001524;product=thioredoxin;protein_id=HIH2189611.1;transl_table=11 DBLQKK010000026.1 tpg gene 3393 3731 . - . ID=gene-ACYKJH_001525;Name=ACYKJH_001525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001525 DBLQKK010000026.1 Protein Homology CDS 3393 3731 . - 0 ID=cds-HIH2189612.1;Parent=gene-ACYKJH_001525;Dbxref=NCBI_GP:HIH2189612.1;Name=HIH2189612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343608.1;locus_tag=ACYKJH_001525;product=YraN family protein;protein_id=HIH2189612.1;transl_table=11 DBLQKK010000026.1 tpg gene 3731 4978 . - . ID=gene-ACYKJH_001526;Name=ACYKJH_001526;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001526 DBLQKK010000026.1 Protein Homology CDS 3731 4978 . - 0 ID=cds-HIH2189613.1;Parent=gene-ACYKJH_001526;Dbxref=NCBI_GP:HIH2189613.1;Name=HIH2189613.1;Ontology_term=GO:0006520,GO:0004412;gbkey=CDS;go_function=homoserine dehydrogenase activity|0004412||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343609.1;locus_tag=ACYKJH_001526;product=homoserine dehydrogenase;protein_id=HIH2189613.1;transl_table=11 DBLQKK010000026.1 tpg gene 4982 6184 . - . ID=gene-ACYKJH_001527;Name=ACYKJH_001527;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001527 DBLQKK010000026.1 Protein Homology CDS 4982 6184 . - 0 ID=cds-HIH2189614.1;Parent=gene-ACYKJH_001527;Dbxref=NCBI_GP:HIH2189614.1;Name=HIH2189614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343610.1;locus_tag=ACYKJH_001527;product=LL-diaminopimelate aminotransferase;protein_id=HIH2189614.1;transl_table=11 DBLQKK010000026.1 tpg gene 6196 7002 . - . ID=gene-ACYKJH_001528;Name=ACYKJH_001528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001528 DBLQKK010000026.1 Protein Homology CDS 6196 7002 . - 0 ID=cds-HIH2189615.1;Parent=gene-ACYKJH_001528;Dbxref=NCBI_GP:HIH2189615.1;Name=HIH2189615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343611.1;locus_tag=ACYKJH_001528;product=hypothetical protein;protein_id=HIH2189615.1;transl_table=11 DBLQKK010000026.1 tpg gene 6996 7934 . - . ID=gene-ACYKJH_001529;Name=ACYKJH_001529;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001529 DBLQKK010000026.1 Protein Homology CDS 6996 7934 . - 0 ID=cds-HIH2189616.1;Parent=gene-ACYKJH_001529;Dbxref=NCBI_GP:HIH2189616.1;Name=HIH2189616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343612.1;locus_tag=ACYKJH_001529;product=hypothetical protein;protein_id=HIH2189616.1;transl_table=11 DBLQKK010000026.1 tpg gene 7927 8610 . - . ID=gene-ACYKJH_001530;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=ACYKJH_001530 DBLQKK010000026.1 Protein Homology CDS 7927 8610 . - 0 ID=cds-HIH2189617.1;Parent=gene-ACYKJH_001530;Dbxref=NCBI_GP:HIH2189617.1;Name=HIH2189617.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343613.1;locus_tag=ACYKJH_001530;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=HIH2189617.1;transl_table=11 DBLQKK010000026.1 tpg gene 8624 9448 . - . ID=gene-ACYKJH_001531;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=ACYKJH_001531 DBLQKK010000026.1 Protein Homology CDS 8624 9448 . - 0 ID=cds-HIH2189618.1;Parent=gene-ACYKJH_001531;Dbxref=NCBI_GP:HIH2189618.1;Name=HIH2189618.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343614.1;locus_tag=ACYKJH_001531;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=HIH2189618.1;transl_table=11 DBLQKK010000026.1 tpg gene 9451 9651 . - . ID=gene-ACYKJH_001532;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=ACYKJH_001532 DBLQKK010000026.1 Protein Homology CDS 9451 9651 . - 0 ID=cds-HIH2189619.1;Parent=gene-ACYKJH_001532;Dbxref=NCBI_GP:HIH2189619.1;Name=HIH2189619.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343615.1;locus_tag=ACYKJH_001532;product=50S ribosomal protein L31;protein_id=HIH2189619.1;transl_table=11 DBLQKK010000026.1 tpg gene 9730 10386 . - . ID=gene-ACYKJH_001533;Name=ACYKJH_001533;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001533 DBLQKK010000026.1 Protein Homology CDS 9730 10386 . - 0 ID=cds-HIH2189620.1;Parent=gene-ACYKJH_001533;Dbxref=NCBI_GP:HIH2189620.1;Name=HIH2189620.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343616.1;locus_tag=ACYKJH_001533;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=HIH2189620.1;transl_table=11 DBLQKK010000026.1 tpg gene 10388 10795 . - . ID=gene-ACYKJH_001534;Name=ACYKJH_001534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001534 DBLQKK010000026.1 Protein Homology CDS 10388 10795 . - 0 ID=cds-HIH2189621.1;Parent=gene-ACYKJH_001534;Dbxref=NCBI_GP:HIH2189621.1;Name=HIH2189621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343617.1;locus_tag=ACYKJH_001534;product=hypothetical protein;protein_id=HIH2189621.1;transl_table=11 DBLQKK010000026.1 tpg gene 10795 11220 . - . ID=gene-ACYKJH_001535;Name=ACYKJH_001535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001535 DBLQKK010000026.1 Protein Homology CDS 10795 11220 . - 0 ID=cds-HIH2189622.1;Parent=gene-ACYKJH_001535;Dbxref=NCBI_GP:HIH2189622.1;Name=HIH2189622.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343618.1;locus_tag=ACYKJH_001535;product=c-type cytochrome;protein_id=HIH2189622.1;transl_table=11 DBLQKK010000026.1 tpg gene 11220 11801 . - . ID=gene-ACYKJH_001536;Name=ACYKJH_001536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001536 DBLQKK010000026.1 Protein Homology CDS 11220 11801 . - 0 ID=cds-HIH2189623.1;Parent=gene-ACYKJH_001536;Dbxref=NCBI_GP:HIH2189623.1;Name=HIH2189623.1;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343619.1;locus_tag=ACYKJH_001536;product=6-pyruvoyl trahydropterin synthase family protein;protein_id=HIH2189623.1;transl_table=11 DBLQKK010000026.1 tpg gene 11798 12541 . - . ID=gene-ACYKJH_001537;Name=ACYKJH_001537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001537 DBLQKK010000026.1 Protein Homology CDS 11798 12541 . - 0 ID=cds-HIH2189624.1;Parent=gene-ACYKJH_001537;Dbxref=NCBI_GP:HIH2189624.1;Name=HIH2189624.1;Ontology_term=GO:0000287,GO:0016840,GO:0051539,GO:1904047;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,carbon-nitrogen lyase activity|0016840||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343620.1;locus_tag=ACYKJH_001537;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=HIH2189624.1;transl_table=11 DBLQKK010000026.1 tpg gene 12544 13506 . - . ID=gene-ACYKJH_001538;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=ACYKJH_001538 DBLQKK010000026.1 Protein Homology CDS 12544 13506 . - 0 ID=cds-HIH2189625.1;Parent=gene-ACYKJH_001538;Dbxref=NCBI_GP:HIH2189625.1;Name=HIH2189625.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343621.1;locus_tag=ACYKJH_001538;product=GTP 3'%2C8-cyclase MoaA;protein_id=HIH2189625.1;transl_table=11 DBLQKK010000026.1 tpg gene 13519 14034 . - . ID=gene-ACYKJH_001539;Name=ACYKJH_001539;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001539 DBLQKK010000026.1 Protein Homology CDS 13519 14034 . - 0 ID=cds-HIH2189626.1;Parent=gene-ACYKJH_001539;Dbxref=NCBI_GP:HIH2189626.1;Name=HIH2189626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343622.1;locus_tag=ACYKJH_001539;product=DUF6115 domain-containing protein;protein_id=HIH2189626.1;transl_table=11 DBLQKK010000026.1 tpg gene 14031 14528 . - . ID=gene-ACYKJH_001540;Name=ACYKJH_001540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001540 DBLQKK010000026.1 Protein Homology CDS 14031 14528 . - 0 ID=cds-HIH2189627.1;Parent=gene-ACYKJH_001540;Dbxref=NCBI_GP:HIH2189627.1;Name=HIH2189627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343623.1;locus_tag=ACYKJH_001540;product=hypothetical protein;protein_id=HIH2189627.1;transl_table=11 DBLQKK010000026.1 tpg gene 14519 15403 . - . ID=gene-ACYKJH_001541;Name=mqnP;gbkey=Gene;gene=mqnP;gene_biotype=protein_coding;locus_tag=ACYKJH_001541 DBLQKK010000026.1 Protein Homology CDS 14519 15403 . - 0 ID=cds-HIH2189628.1;Parent=gene-ACYKJH_001541;Dbxref=NCBI_GP:HIH2189628.1;Name=HIH2189628.1;gbkey=CDS;gene=mqnP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343624.1;locus_tag=ACYKJH_001541;product=menaquinone biosynthesis prenyltransferase MqnP;protein_id=HIH2189628.1;transl_table=11 DBLQKK010000026.1 tpg gene 15474 16343 . + . ID=gene-ACYKJH_001542;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=ACYKJH_001542 DBLQKK010000026.1 Protein Homology CDS 15474 16343 . + 0 ID=cds-HIH2189629.1;Parent=gene-ACYKJH_001542;Dbxref=NCBI_GP:HIH2189629.1;Name=HIH2189629.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343625.1;locus_tag=ACYKJH_001542;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=HIH2189629.1;transl_table=11 DBLQKK010000026.1 tpg gene 16329 16892 . - . ID=gene-ACYKJH_001543;Name=ACYKJH_001543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001543 DBLQKK010000026.1 Protein Homology CDS 16329 16892 . - 0 ID=cds-HIH2189630.1;Parent=gene-ACYKJH_001543;Dbxref=NCBI_GP:HIH2189630.1;Name=HIH2189630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343626.1;locus_tag=ACYKJH_001543;product=manganese efflux pump MntP family protein;protein_id=HIH2189630.1;transl_table=11 DBLQKK010000026.1 tpg gene 17040 17114 . + . ID=gene-ACYKJH_001544;Name=ACYKJH_001544;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_001544 DBLQKK010000026.1 tRNAscan-SE tRNA 17040 17114 . + . ID=rna-ACYKJH_001544;Parent=gene-ACYKJH_001544;anticodon=(pos:17073..17075);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_001544;product=tRNA-Glu DBLQKK010000026.1 tRNAscan-SE exon 17040 17114 . + . ID=exon-ACYKJH_001544-1;Parent=rna-ACYKJH_001544;anticodon=(pos:17073..17075);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_001544;product=tRNA-Glu DBLQKK010000026.1 tpg gene 17250 17432 . - . ID=gene-ACYKJH_001545;Name=ACYKJH_001545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001545 DBLQKK010000026.1 Protein Homology CDS 17250 17432 . - 0 ID=cds-HIH2189631.1;Parent=gene-ACYKJH_001545;Dbxref=NCBI_GP:HIH2189631.1;Name=HIH2189631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343627.1;locus_tag=ACYKJH_001545;product=hypothetical protein;protein_id=HIH2189631.1;transl_table=11 ##sequence-region DBLQKK010000027.1 1 17381 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000027.1 tpg region 1 17381 . + . ID=DBLQKK010000027.1:1..17381;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000027.1 tpg gene 52 149 . + . ID=gene-ACYKJH_001546;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=ACYKJH_001546 DBLQKK010000027.1 cmsearch SRP_RNA 52 149 . + . ID=rna-ACYKJH_001546;Parent=gene-ACYKJH_001546;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKJH_001546;product=signal recognition particle sRNA small type DBLQKK010000027.1 cmsearch exon 52 149 . + . ID=exon-ACYKJH_001546-1;Parent=rna-ACYKJH_001546;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKJH_001546;product=signal recognition particle sRNA small type DBLQKK010000027.1 tpg gene 376 525 . + . ID=gene-ACYKJH_001547;Name=ACYKJH_001547;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001547 DBLQKK010000027.1 Protein Homology CDS 376 525 . + 0 ID=cds-HIH2189632.1;Parent=gene-ACYKJH_001547;Dbxref=NCBI_GP:HIH2189632.1;Name=HIH2189632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002857729.1;locus_tag=ACYKJH_001547;product=sodium:sulfate symporter;protein_id=HIH2189632.1;transl_table=11 DBLQKK010000027.1 tpg gene 748 1092 . + . ID=gene-ACYKJH_001548;Name=ACYKJH_001548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001548 DBLQKK010000027.1 Protein Homology CDS 748 1092 . + 0 ID=cds-HIH2189633.1;Parent=gene-ACYKJH_001548;Dbxref=NCBI_GP:HIH2189633.1;Name=HIH2189633.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002878094.1;locus_tag=ACYKJH_001548;product=anion permease;protein_id=HIH2189633.1;transl_table=11 DBLQKK010000027.1 tpg gene 1035 1250 . + . ID=gene-ACYKJH_001549;Name=ACYKJH_001549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001549 DBLQKK010000027.1 Protein Homology CDS 1035 1250 . + 0 ID=cds-HIH2189634.1;Parent=gene-ACYKJH_001549;Dbxref=NCBI_GP:HIH2189634.1;Name=HIH2189634.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002869943.1;locus_tag=ACYKJH_001549;product=anion permease;protein_id=HIH2189634.1;transl_table=11 DBLQKK010000027.1 tpg gene 1165 1428 . + . ID=gene-ACYKJH_001550;Name=ACYKJH_001550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001550 DBLQKK010000027.1 Protein Homology CDS 1165 1428 . + 0 ID=cds-HIH2189635.1;Parent=gene-ACYKJH_001550;Dbxref=NCBI_GP:HIH2189635.1;Name=HIH2189635.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013132.6;locus_tag=ACYKJH_001550;product=anion permease;protein_id=HIH2189635.1;transl_table=11 DBLQKK010000027.1 tpg gene 1551 1772 . + . ID=gene-ACYKJH_001551;Name=ACYKJH_001551;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001551 DBLQKK010000027.1 Protein Homology CDS 1551 1772 . + 0 ID=cds-HIH2189636.1;Parent=gene-ACYKJH_001551;Dbxref=NCBI_GP:HIH2189636.1;Name=HIH2189636.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002867889.1;locus_tag=ACYKJH_001551;product=anion permease;protein_id=HIH2189636.1;transl_table=11 DBLQKK010000027.1 tpg gene 1824 2840 . - . ID=gene-ACYKJH_001552;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=ACYKJH_001552 DBLQKK010000027.1 Protein Homology CDS 1824 2840 . - 0 ID=cds-HIH2189637.1;Parent=gene-ACYKJH_001552;Dbxref=NCBI_GP:HIH2189637.1;Name=HIH2189637.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343517.1;locus_tag=ACYKJH_001552;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=HIH2189637.1;transl_table=11 DBLQKK010000027.1 tpg gene 2840 3445 . - . ID=gene-ACYKJH_001553;Name=ACYKJH_001553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001553 DBLQKK010000027.1 Protein Homology CDS 2840 3445 . - 0 ID=cds-HIH2189638.1;Parent=gene-ACYKJH_001553;Dbxref=NCBI_GP:HIH2189638.1;Name=HIH2189638.1;Ontology_term=GO:0009691,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343518.1;locus_tag=ACYKJH_001553;product=TIGR00730 family Rossman fold protein;protein_id=HIH2189638.1;transl_table=11 DBLQKK010000027.1 tpg gene 3566 4714 . - . ID=gene-ACYKJH_001554;Name=ACYKJH_001554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001554 DBLQKK010000027.1 Protein Homology CDS 3566 4714 . - 0 ID=cds-HIH2189639.1;Parent=gene-ACYKJH_001554;Dbxref=NCBI_GP:HIH2189639.1;Name=HIH2189639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002859749.1;locus_tag=ACYKJH_001554;product=Cj0814 family flagellar-dependent secreted protein;protein_id=HIH2189639.1;transl_table=11 DBLQKK010000027.1 tpg gene 4784 5299 . - . ID=gene-ACYKJH_001555;Name=ACYKJH_001555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001555 DBLQKK010000027.1 Protein Homology CDS 4784 5299 . - 0 ID=cds-HIH2189640.1;Parent=gene-ACYKJH_001555;Dbxref=NCBI_GP:HIH2189640.1;Name=HIH2189640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002870295.1;locus_tag=ACYKJH_001555;product=hypothetical protein;protein_id=HIH2189640.1;transl_table=11 DBLQKK010000027.1 tpg pseudogene 5432 6285 . + . ID=gene-ACYKJH_001556;Name=ACYKJH_001556;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001556;pseudo=true DBLQKK010000027.1 Protein Homology CDS 5432 6285 . + 0 ID=cds-ACYKJH_001556;Parent=gene-ACYKJH_001556;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343521.1;locus_tag=ACYKJH_001556;product=hypothetical protein;pseudo=true;transl_table=11 DBLQKK010000027.1 tpg gene 6270 6869 . + . ID=gene-ACYKJH_001557;Name=ACYKJH_001557;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001557 DBLQKK010000027.1 Protein Homology CDS 6270 6869 . + 0 ID=cds-HIH2189641.1;Parent=gene-ACYKJH_001557;Dbxref=NCBI_GP:HIH2189641.1;Name=HIH2189641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343522.1;locus_tag=ACYKJH_001557;product=C39 family peptidase;protein_id=HIH2189641.1;transl_table=11 DBLQKK010000027.1 tpg gene 6918 7760 . - . ID=gene-ACYKJH_001558;Name=fliY;gbkey=Gene;gene=fliY;gene_biotype=protein_coding;locus_tag=ACYKJH_001558 DBLQKK010000027.1 Protein Homology CDS 6918 7760 . - 0 ID=cds-HIH2189642.1;Parent=gene-ACYKJH_001558;Dbxref=NCBI_GP:HIH2189642.1;Name=HIH2189642.1;Ontology_term=GO:0071973,GO:0003774,GO:0009425;gbkey=CDS;gene=fliY;go_component=bacterial-type flagellum basal body|0009425||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343523.1;locus_tag=ACYKJH_001558;product=flagellar motor switch protein FliY;protein_id=HIH2189642.1;transl_table=11 DBLQKK010000027.1 tpg gene 7757 8836 . - . ID=gene-ACYKJH_001559;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=ACYKJH_001559 DBLQKK010000027.1 Protein Homology CDS 7757 8836 . - 0 ID=cds-HIH2189643.1;Parent=gene-ACYKJH_001559;Dbxref=NCBI_GP:HIH2189643.1;Name=HIH2189643.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343524.1;locus_tag=ACYKJH_001559;product=flagellar motor switch protein FliM;protein_id=HIH2189643.1;transl_table=11 DBLQKK010000027.1 tpg gene 8836 9528 . - . ID=gene-ACYKJH_001560;Name=fliA;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;locus_tag=ACYKJH_001560 DBLQKK010000027.1 Protein Homology CDS 8836 9528 . - 0 ID=cds-HIH2189644.1;Parent=gene-ACYKJH_001560;Dbxref=NCBI_GP:HIH2189644.1;Name=HIH2189644.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;gene=fliA;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002851943.1;locus_tag=ACYKJH_001560;product=RNA polymerase sigma factor FliA;protein_id=HIH2189644.1;transl_table=11 DBLQKK010000027.1 tpg gene 9509 9865 . - . ID=gene-ACYKJH_001561;Name=ACYKJH_001561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001561 DBLQKK010000027.1 Protein Homology CDS 9509 9865 . - 0 ID=cds-HIH2189645.1;Parent=gene-ACYKJH_001561;Dbxref=NCBI_GP:HIH2189645.1;Name=HIH2189645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343526.1;locus_tag=ACYKJH_001561;product=hypothetical protein;protein_id=HIH2189645.1;transl_table=11 DBLQKK010000027.1 tpg gene 9884 10750 . - . ID=gene-ACYKJH_001562;Name=flhG;gbkey=Gene;gene=flhG;gene_biotype=protein_coding;locus_tag=ACYKJH_001562 DBLQKK010000027.1 Protein Homology CDS 9884 10750 . - 0 ID=cds-HIH2189646.1;Parent=gene-ACYKJH_001562;Dbxref=NCBI_GP:HIH2189646.1;Name=HIH2189646.1;gbkey=CDS;gene=flhG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343527.1;locus_tag=ACYKJH_001562;product=flagella biosynthesis ATPase FlhG;protein_id=HIH2189646.1;transl_table=11 DBLQKK010000027.1 tpg gene 10743 12197 . - . ID=gene-ACYKJH_001563;Name=flhF;gbkey=Gene;gene=flhF;gene_biotype=protein_coding;locus_tag=ACYKJH_001563 DBLQKK010000027.1 Protein Homology CDS 10743 12197 . - 0 ID=cds-HIH2189647.1;Parent=gene-ACYKJH_001563;Dbxref=NCBI_GP:HIH2189647.1;Name=HIH2189647.1;Ontology_term=GO:0044781,GO:0003924,GO:0005525;gbkey=CDS;gene=flhF;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343528.1;locus_tag=ACYKJH_001563;product=flagellar biosynthesis protein FlhF;protein_id=HIH2189647.1;transl_table=11 DBLQKK010000027.1 tpg gene 12207 12680 . - . ID=gene-ACYKJH_001564;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=ACYKJH_001564 DBLQKK010000027.1 Protein Homology CDS 12207 12680 . - 0 ID=cds-HIH2189648.1;Parent=gene-ACYKJH_001564;Dbxref=NCBI_GP:HIH2189648.1;Name=HIH2189648.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343529.1;locus_tag=ACYKJH_001564;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=HIH2189648.1;transl_table=11 DBLQKK010000027.1 tpg gene 12683 13162 . - . ID=gene-ACYKJH_001565;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=ACYKJH_001565 DBLQKK010000027.1 Protein Homology CDS 12683 13162 . - 0 ID=cds-HIH2189649.1;Parent=gene-ACYKJH_001565;Dbxref=NCBI_GP:HIH2189649.1;Name=HIH2189649.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343530.1;locus_tag=ACYKJH_001565;product=type II 3-dehydroquinate dehydratase;protein_id=HIH2189649.1;transl_table=11 DBLQKK010000027.1 tpg gene 13253 14482 . + . ID=gene-ACYKJH_001566;Name=mqnF;gbkey=Gene;gene=mqnF;gene_biotype=protein_coding;locus_tag=ACYKJH_001566 DBLQKK010000027.1 Protein Homology CDS 13253 14482 . + 0 ID=cds-HIH2189650.1;Parent=gene-ACYKJH_001566;Dbxref=NCBI_GP:HIH2189650.1;Name=HIH2189650.1;gbkey=CDS;gene=mqnF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343531.1;locus_tag=ACYKJH_001566;product=aminofutalosine deaminase family hydrolase;protein_id=HIH2189650.1;transl_table=11 DBLQKK010000027.1 tpg gene 14470 15366 . + . ID=gene-ACYKJH_001567;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=ACYKJH_001567 DBLQKK010000027.1 Protein Homology CDS 14470 15366 . + 0 ID=cds-HIH2189651.1;Parent=gene-ACYKJH_001567;Dbxref=NCBI_GP:HIH2189651.1;Name=HIH2189651.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=sppA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343532.1;locus_tag=ACYKJH_001567;product=signal peptide peptidase SppA;protein_id=HIH2189651.1;transl_table=11 DBLQKK010000027.1 tpg gene 15445 16476 . + . ID=gene-ACYKJH_001568;Name=ACYKJH_001568;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001568 DBLQKK010000027.1 Protein Homology CDS 15445 16476 . + 0 ID=cds-HIH2189652.1;Parent=gene-ACYKJH_001568;Dbxref=NCBI_GP:HIH2189652.1;Name=HIH2189652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343533.1;locus_tag=ACYKJH_001568;product=Cj0069 family protein;protein_id=HIH2189652.1;transl_table=11 DBLQKK010000027.1 tpg gene 16473 16658 . - . ID=gene-ACYKJH_001569;Name=ACYKJH_001569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001569 DBLQKK010000027.1 Protein Homology CDS 16473 16658 . - 0 ID=cds-HIH2189653.1;Parent=gene-ACYKJH_001569;Dbxref=NCBI_GP:HIH2189653.1;Name=HIH2189653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002784829.1;locus_tag=ACYKJH_001569;product=hypothetical protein;protein_id=HIH2189653.1;transl_table=11 DBLQKK010000027.1 tpg pseudogene 16719 17284 . - . ID=gene-ACYKJH_001570;Name=ACYKJH_001570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001570;pseudo=true DBLQKK010000027.1 Protein Homology CDS 16719 17284 . - 0 ID=cds-ACYKJH_001570;Parent=gene-ACYKJH_001570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002778768.1;locus_tag=ACYKJH_001570;product=hemerythrin family protein;pseudo=true;transl_table=11 ##sequence-region DBLQKK010000028.1 1 15989 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000028.1 tpg region 1 15989 . + . ID=DBLQKK010000028.1:1..15989;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000028.1 tpg gene 1 2326 . + . ID=gene-ACYKJH_001571;Name=ACYKJH_001571;gbkey=Gene;gene_biotype=rRNA;locus_tag=ACYKJH_001571;partial=true;start_range=.,1 DBLQKK010000028.1 cmsearch rRNA 1 2326 . + . ID=rna-ACYKJH_001571;Parent=gene-ACYKJH_001571;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKJH_001571;partial=true;product=23S ribosomal RNA;start_range=.,1 DBLQKK010000028.1 cmsearch exon 1 2326 . + . ID=exon-ACYKJH_001571-1;Parent=rna-ACYKJH_001571;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKJH_001571;partial=true;product=23S ribosomal RNA;start_range=.,1 DBLQKK010000028.1 tpg gene 2582 2698 . + . ID=gene-ACYKJH_001572;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=ACYKJH_001572 DBLQKK010000028.1 cmsearch rRNA 2582 2698 . + . ID=rna-ACYKJH_001572;Parent=gene-ACYKJH_001572;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKJH_001572;product=5S ribosomal RNA DBLQKK010000028.1 cmsearch exon 2582 2698 . + . ID=exon-ACYKJH_001572-1;Parent=rna-ACYKJH_001572;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKJH_001572;product=5S ribosomal RNA DBLQKK010000028.1 tpg pseudogene 2775 3980 . + . ID=gene-ACYKJH_001573;Name=ACYKJH_001573;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001573;pseudo=true DBLQKK010000028.1 Protein Homology CDS 2775 3980 . + 0 ID=cds-ACYKJH_001573;Parent=gene-ACYKJH_001573;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343502.1;locus_tag=ACYKJH_001573;product=PD-(D/E)XK nuclease family protein;pseudo=true;transl_table=11 DBLQKK010000028.1 tpg pseudogene 4041 7788 . + . ID=gene-ACYKJH_001574;Name=ACYKJH_001574;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001574;pseudo=true DBLQKK010000028.1 Protein Homology CDS 4041 7788 . + 0 ID=cds-ACYKJH_001574;Parent=gene-ACYKJH_001574;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002864684.1;locus_tag=ACYKJH_001574;product=class I SAM-dependent DNA methyltransferase;pseudo=true;transl_table=11 DBLQKK010000028.1 tpg gene 7788 9347 . + . ID=gene-ACYKJH_001575;Name=ACYKJH_001575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001575 DBLQKK010000028.1 Protein Homology CDS 7788 9347 . + 0 ID=cds-HIH2189654.1;Parent=gene-ACYKJH_001575;Dbxref=NCBI_GP:HIH2189654.1;Name=HIH2189654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019108650.1;locus_tag=ACYKJH_001575;product=pentapeptide repeat-containing protein;protein_id=HIH2189654.1;transl_table=11 DBLQKK010000028.1 tpg gene 9480 11423 . + . ID=gene-ACYKJH_001576;Name=ACYKJH_001576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001576 DBLQKK010000028.1 Protein Homology CDS 9480 11423 . + 0 ID=cds-HIH2189655.1;Parent=gene-ACYKJH_001576;Dbxref=NCBI_GP:HIH2189655.1;Name=HIH2189655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002864687.1;locus_tag=ACYKJH_001576;product=pentapeptide repeat-containing protein;protein_id=HIH2189655.1;transl_table=11 DBLQKK010000028.1 tpg gene 11453 12154 . - . ID=gene-ACYKJH_001577;Name=ACYKJH_001577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001577 DBLQKK010000028.1 Protein Homology CDS 11453 12154 . - 0 ID=cds-HIH2189656.1;Parent=gene-ACYKJH_001577;Dbxref=NCBI_GP:HIH2189656.1;Name=HIH2189656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343505.1;locus_tag=ACYKJH_001577;product=SIMPL domain-containing protein;protein_id=HIH2189656.1;transl_table=11 DBLQKK010000028.1 tpg gene 12151 13353 . - . ID=gene-ACYKJH_001578;Name=ACYKJH_001578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001578 DBLQKK010000028.1 Protein Homology CDS 12151 13353 . - 0 ID=cds-HIH2189657.1;Parent=gene-ACYKJH_001578;Dbxref=NCBI_GP:HIH2189657.1;Name=HIH2189657.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343506.1;locus_tag=ACYKJH_001578;product=multidrug effflux MFS transporter;protein_id=HIH2189657.1;transl_table=11 DBLQKK010000028.1 tpg gene 13458 14807 . + . ID=gene-ACYKJH_001579;Name=ACYKJH_001579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001579 DBLQKK010000028.1 Protein Homology CDS 13458 14807 . + 0 ID=cds-HIH2189658.1;Parent=gene-ACYKJH_001579;Dbxref=NCBI_GP:HIH2189658.1;Name=HIH2189658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343507.1;locus_tag=ACYKJH_001579;product=DUF2130 domain-containing protein;protein_id=HIH2189658.1;transl_table=11 DBLQKK010000028.1 tpg gene 14831 15874 . - . ID=gene-ACYKJH_001580;Name=ACYKJH_001580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001580 DBLQKK010000028.1 Protein Homology CDS 14831 15874 . - 0 ID=cds-HIH2189659.1;Parent=gene-ACYKJH_001580;Dbxref=NCBI_GP:HIH2189659.1;Name=HIH2189659.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343508.1;locus_tag=ACYKJH_001580;product=c-type cytochrome;protein_id=HIH2189659.1;transl_table=11 ##sequence-region DBLQKK010000029.1 1 13679 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000029.1 tpg region 1 13679 . + . ID=DBLQKK010000029.1:1..13679;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000029.1 tpg gene 65 1315 . + . ID=gene-ACYKJH_001581;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=ACYKJH_001581 DBLQKK010000029.1 Protein Homology CDS 65 1315 . + 0 ID=cds-HIH2189660.1;Parent=gene-ACYKJH_001581;Dbxref=NCBI_GP:HIH2189660.1;Name=HIH2189660.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344994.1;locus_tag=ACYKJH_001581;product=serine/threonine protein kinase;protein_id=HIH2189660.1;transl_table=11 DBLQKK010000029.1 tpg gene 1330 2694 . + . ID=gene-ACYKJH_001582;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=ACYKJH_001582 DBLQKK010000029.1 Protein Homology CDS 1330 2694 . + 0 ID=cds-HIH2189661.1;Parent=gene-ACYKJH_001582;Dbxref=NCBI_GP:HIH2189661.1;Name=HIH2189661.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;gene=sdaA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344993.1;locus_tag=ACYKJH_001582;product=L-serine ammonia-lyase;protein_id=HIH2189661.1;transl_table=11 DBLQKK010000029.1 tpg gene 2702 3223 . - . ID=gene-ACYKJH_001583;Name=ACYKJH_001583;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001583 DBLQKK010000029.1 Protein Homology CDS 2702 3223 . - 0 ID=cds-HIH2189662.1;Parent=gene-ACYKJH_001583;Dbxref=NCBI_GP:HIH2189662.1;Name=HIH2189662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344992.1;locus_tag=ACYKJH_001583;product=hypothetical protein;protein_id=HIH2189662.1;transl_table=11 DBLQKK010000029.1 tpg gene 3204 4214 . - . ID=gene-ACYKJH_001584;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=ACYKJH_001584 DBLQKK010000029.1 Protein Homology CDS 3204 4214 . - 0 ID=cds-HIH2189663.1;Parent=gene-ACYKJH_001584;Dbxref=NCBI_GP:HIH2189663.1;Name=HIH2189663.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344991.1;locus_tag=ACYKJH_001584;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=HIH2189663.1;transl_table=11 DBLQKK010000029.1 tpg gene 4420 4507 . - . ID=gene-ACYKJH_001585;Name=ACYKJH_001585;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_001585 DBLQKK010000029.1 tRNAscan-SE tRNA 4420 4507 . - . ID=rna-ACYKJH_001585;Parent=gene-ACYKJH_001585;anticodon=(pos:complement(4471..4473));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_001585;product=tRNA-Ser DBLQKK010000029.1 tRNAscan-SE exon 4420 4507 . - . ID=exon-ACYKJH_001585-1;Parent=rna-ACYKJH_001585;anticodon=(pos:complement(4471..4473));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_001585;product=tRNA-Ser DBLQKK010000029.1 tpg gene 4529 4602 . - . ID=gene-ACYKJH_001586;Name=ACYKJH_001586;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_001586 DBLQKK010000029.1 tRNAscan-SE tRNA 4529 4602 . - . ID=rna-ACYKJH_001586;Parent=gene-ACYKJH_001586;anticodon=(pos:complement(4568..4570));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_001586;product=tRNA-Cys DBLQKK010000029.1 tRNAscan-SE exon 4529 4602 . - . ID=exon-ACYKJH_001586-1;Parent=rna-ACYKJH_001586;anticodon=(pos:complement(4568..4570));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_001586;product=tRNA-Cys DBLQKK010000029.1 tpg gene 4621 4709 . - . ID=gene-ACYKJH_001587;Name=ACYKJH_001587;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_001587 DBLQKK010000029.1 tRNAscan-SE tRNA 4621 4709 . - . ID=rna-ACYKJH_001587;Parent=gene-ACYKJH_001587;anticodon=(pos:complement(4673..4675));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_001587;product=tRNA-Leu DBLQKK010000029.1 tRNAscan-SE exon 4621 4709 . - . ID=exon-ACYKJH_001587-1;Parent=rna-ACYKJH_001587;anticodon=(pos:complement(4673..4675));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_001587;product=tRNA-Leu DBLQKK010000029.1 tpg gene 4719 4793 . - . ID=gene-ACYKJH_001588;Name=ACYKJH_001588;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_001588 DBLQKK010000029.1 tRNAscan-SE tRNA 4719 4793 . - . ID=rna-ACYKJH_001588;Parent=gene-ACYKJH_001588;anticodon=(pos:complement(4759..4761));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_001588;product=tRNA-Gly DBLQKK010000029.1 tRNAscan-SE exon 4719 4793 . - . ID=exon-ACYKJH_001588-1;Parent=rna-ACYKJH_001588;anticodon=(pos:complement(4759..4761));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_001588;product=tRNA-Gly DBLQKK010000029.1 tpg gene 4865 5617 . - . ID=gene-ACYKJH_001589;Name=ACYKJH_001589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001589 DBLQKK010000029.1 Protein Homology CDS 4865 5617 . - 0 ID=cds-HIH2189664.1;Parent=gene-ACYKJH_001589;Dbxref=NCBI_GP:HIH2189664.1;Name=HIH2189664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344990.1;locus_tag=ACYKJH_001589;product=hypothetical protein;protein_id=HIH2189664.1;transl_table=11 DBLQKK010000029.1 tpg gene 5690 6709 . + . ID=gene-ACYKJH_001590;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=ACYKJH_001590 DBLQKK010000029.1 Protein Homology CDS 5690 6709 . + 0 ID=cds-HIH2189665.1;Parent=gene-ACYKJH_001590;Dbxref=NCBI_GP:HIH2189665.1;Name=HIH2189665.1;Ontology_term=GO:0006284,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344989.1;locus_tag=ACYKJH_001590;product=A/G-specific adenine glycosylase;protein_id=HIH2189665.1;transl_table=11 DBLQKK010000029.1 tpg gene 6695 7954 . - . ID=gene-ACYKJH_001591;Name=kgtP;gbkey=Gene;gene=kgtP;gene_biotype=protein_coding;locus_tag=ACYKJH_001591 DBLQKK010000029.1 Protein Homology CDS 6695 7954 . - 0 ID=cds-HIH2189666.1;Parent=gene-ACYKJH_001591;Dbxref=NCBI_GP:HIH2189666.1;Name=HIH2189666.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=kgtP;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344988.1;locus_tag=ACYKJH_001591;product=MFS transporter;protein_id=HIH2189666.1;transl_table=11 DBLQKK010000029.1 tpg gene 8120 8977 . + . ID=gene-ACYKJH_001592;Name=ACYKJH_001592;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001592 DBLQKK010000029.1 Protein Homology CDS 8120 8977 . + 0 ID=cds-HIH2189667.1;Parent=gene-ACYKJH_001592;Dbxref=NCBI_GP:HIH2189667.1;Name=HIH2189667.1;Ontology_term=GO:0003824,GO:0051539,GO:1904047;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937912.1;locus_tag=ACYKJH_001592;product=radical SAM/SPASM domain-containing protein;protein_id=HIH2189667.1;transl_table=11 DBLQKK010000029.1 tpg gene 8974 9780 . - . ID=gene-ACYKJH_001593;Name=chuD;gbkey=Gene;gene=chuD;gene_biotype=protein_coding;locus_tag=ACYKJH_001593 DBLQKK010000029.1 Protein Homology CDS 8974 9780 . - 0 ID=cds-HIH2189668.1;Parent=gene-ACYKJH_001593;Dbxref=NCBI_GP:HIH2189668.1;Name=HIH2189668.1;gbkey=CDS;gene=chuD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344986.1;locus_tag=ACYKJH_001593;product=ABC transporter substrate-binding protein;protein_id=HIH2189668.1;transl_table=11 DBLQKK010000029.1 tpg gene 9777 10553 . - . ID=gene-ACYKJH_001594;Name=chuC;gbkey=Gene;gene=chuC;gene_biotype=protein_coding;locus_tag=ACYKJH_001594 DBLQKK010000029.1 Protein Homology CDS 9777 10553 . - 0 ID=cds-HIH2189669.1;Parent=gene-ACYKJH_001594;Dbxref=NCBI_GP:HIH2189669.1;Name=HIH2189669.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=chuC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344985.1;locus_tag=ACYKJH_001594;product=ABC transporter ATP-binding protein;protein_id=HIH2189669.1;transl_table=11 DBLQKK010000029.1 tpg gene 10553 11539 . - . ID=gene-ACYKJH_001595;Name=chuB;gbkey=Gene;gene=chuB;gene_biotype=protein_coding;locus_tag=ACYKJH_001595 DBLQKK010000029.1 Protein Homology CDS 10553 11539 . - 0 ID=cds-HIH2189670.1;Parent=gene-ACYKJH_001595;Dbxref=NCBI_GP:HIH2189670.1;Name=HIH2189670.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;gene=chuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344984.1;locus_tag=ACYKJH_001595;product=FecCD family ABC transporter permease;protein_id=HIH2189670.1;transl_table=11 DBLQKK010000029.1 tpg gene 11514 13643 . - . ID=gene-ACYKJH_001596;Name=chuA;gbkey=Gene;gene=chuA;gene_biotype=protein_coding;locus_tag=ACYKJH_001596 DBLQKK010000029.1 Protein Homology CDS 11514 13643 . - 0 ID=cds-HIH2189671.1;Parent=gene-ACYKJH_001596;Dbxref=NCBI_GP:HIH2189671.1;Name=HIH2189671.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;gene=chuA;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344983.1;locus_tag=ACYKJH_001596;product=TonB-dependent receptor;protein_id=HIH2189671.1;transl_table=11 ##sequence-region DBLQKK010000030.1 1 13395 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000030.1 tpg region 1 13395 . + . ID=DBLQKK010000030.1:1..13395;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000030.1 tpg gene 1 1164 . - . ID=gene-ACYKJH_001597;Name=ACYKJH_001597;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001597;partial=true;start_range=.,1 DBLQKK010000030.1 Protein Homology CDS 1 1164 . - 0 ID=cds-HIH2189672.1;Parent=gene-ACYKJH_001597;Dbxref=NCBI_GP:HIH2189672.1;Name=HIH2189672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343685.1;locus_tag=ACYKJH_001597;partial=true;product=hypothetical protein;protein_id=HIH2189672.1;start_range=.,1;transl_table=11 DBLQKK010000030.1 tpg gene 1323 1514 . + . ID=gene-ACYKJH_001598;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=ACYKJH_001598 DBLQKK010000030.1 Protein Homology CDS 1323 1514 . + 0 ID=cds-HIH2189673.1;Parent=gene-ACYKJH_001598;Dbxref=NCBI_GP:HIH2189673.1;Name=HIH2189673.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343686.1;locus_tag=ACYKJH_001598;product=50S ribosomal protein L35;protein_id=HIH2189673.1;transl_table=11 DBLQKK010000030.1 tpg gene 1608 1961 . + . ID=gene-ACYKJH_001599;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=ACYKJH_001599 DBLQKK010000030.1 Protein Homology CDS 1608 1961 . + 0 ID=cds-HIH2189674.1;Parent=gene-ACYKJH_001599;Dbxref=NCBI_GP:HIH2189674.1;Name=HIH2189674.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343687.1;locus_tag=ACYKJH_001599;product=50S ribosomal protein L20;protein_id=HIH2189674.1;transl_table=11 DBLQKK010000030.1 tpg gene 2163 2555 . - . ID=gene-ACYKJH_001600;Name=ACYKJH_001600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001600 DBLQKK010000030.1 Protein Homology CDS 2163 2555 . - 0 ID=cds-HIH2189675.1;Parent=gene-ACYKJH_001600;Dbxref=NCBI_GP:HIH2189675.1;Name=HIH2189675.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021926.6;locus_tag=ACYKJH_001600;product=FIST C-terminal domain-containing protein;protein_id=HIH2189675.1;transl_table=11 DBLQKK010000030.1 tpg pseudogene 2531 3095 . - . ID=gene-ACYKJH_001601;Name=ACYKJH_001601;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001601;pseudo=true DBLQKK010000030.1 Protein Homology CDS 2531 3095 . - 0 ID=cds-ACYKJH_001601;Parent=gene-ACYKJH_001601;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002851848.1;locus_tag=ACYKJH_001601;product=FIST N-terminal domain-containing protein;pseudo=true;transl_table=11 DBLQKK010000030.1 tpg gene 3577 4434 . + . ID=gene-ACYKJH_001602;Name=cheP;gbkey=Gene;gene=cheP;gene_biotype=protein_coding;locus_tag=ACYKJH_001602 DBLQKK010000030.1 Protein Homology CDS 3577 4434 . + 0 ID=cds-HIH2189676.1;Parent=gene-ACYKJH_001602;Dbxref=NCBI_GP:HIH2189676.1;Name=HIH2189676.1;gbkey=CDS;gene=cheP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002922676.1;locus_tag=ACYKJH_001602;product=cheVAW transcriptional regulator CheP;protein_id=HIH2189676.1;transl_table=11 DBLQKK010000030.1 tpg gene 4462 4941 . + . ID=gene-ACYKJH_001603;Name=cheQ;gbkey=Gene;gene=cheQ;gene_biotype=protein_coding;locus_tag=ACYKJH_001603 DBLQKK010000030.1 Protein Homology CDS 4462 4941 . + 0 ID=cds-HIH2189677.1;Parent=gene-ACYKJH_001603;Dbxref=NCBI_GP:HIH2189677.1;Name=HIH2189677.1;gbkey=CDS;gene=cheQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343691.1;locus_tag=ACYKJH_001603;product=cheVAW transcriptional regulator CheQ;protein_id=HIH2189677.1;transl_table=11 DBLQKK010000030.1 tpg gene 4910 6220 . - . ID=gene-ACYKJH_001604;Name=ACYKJH_001604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001604 DBLQKK010000030.1 Protein Homology CDS 4910 6220 . - 0 ID=cds-HIH2189678.1;Parent=gene-ACYKJH_001604;Dbxref=NCBI_GP:HIH2189678.1;Name=HIH2189678.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343692.1;locus_tag=ACYKJH_001604;product=MFS transporter;protein_id=HIH2189678.1;transl_table=11 DBLQKK010000030.1 tpg gene 6204 6380 . - . ID=gene-ACYKJH_001605;Name=ACYKJH_001605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001605 DBLQKK010000030.1 Protein Homology CDS 6204 6380 . - 0 ID=cds-HIH2189679.1;Parent=gene-ACYKJH_001605;Dbxref=NCBI_GP:HIH2189679.1;Name=HIH2189679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002873624.1;locus_tag=ACYKJH_001605;product=highly acidic protein;protein_id=HIH2189679.1;transl_table=11 DBLQKK010000030.1 tpg gene 6473 6946 . + . ID=gene-ACYKJH_001606;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=ACYKJH_001606 DBLQKK010000030.1 Protein Homology CDS 6473 6946 . + 0 ID=cds-HIH2189680.1;Parent=gene-ACYKJH_001606;Dbxref=NCBI_GP:HIH2189680.1;Name=HIH2189680.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343694.1;locus_tag=ACYKJH_001606;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=HIH2189680.1;transl_table=11 DBLQKK010000030.1 tpg gene 6924 7187 . + . ID=gene-ACYKJH_001607;Name=ACYKJH_001607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001607 DBLQKK010000030.1 Protein Homology CDS 6924 7187 . + 0 ID=cds-HIH2189681.1;Parent=gene-ACYKJH_001607;Dbxref=NCBI_GP:HIH2189681.1;Name=HIH2189681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343695.1;locus_tag=ACYKJH_001607;product=HP0495 family protein;protein_id=HIH2189681.1;transl_table=11 DBLQKK010000030.1 tpg gene 7177 8337 . + . ID=gene-ACYKJH_001608;Name=ACYKJH_001608;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001608 DBLQKK010000030.1 Protein Homology CDS 7177 8337 . + 0 ID=cds-HIH2189682.1;Parent=gene-ACYKJH_001608;Dbxref=NCBI_GP:HIH2189682.1;Name=HIH2189682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343696.1;locus_tag=ACYKJH_001608;product=hypothetical protein;protein_id=HIH2189682.1;transl_table=11 DBLQKK010000030.1 tpg gene 8356 9114 . - . ID=gene-ACYKJH_001609;Name=exoA;gbkey=Gene;gene=exoA;gene_biotype=protein_coding;locus_tag=ACYKJH_001609 DBLQKK010000030.1 Protein Homology CDS 8356 9114 . - 0 ID=cds-HIH2189683.1;Parent=gene-ACYKJH_001609;Dbxref=NCBI_GP:HIH2189683.1;Name=HIH2189683.1;Ontology_term=GO:0006281,GO:0004518;gbkey=CDS;gene=exoA;go_function=nuclease activity|0004518||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343697.1;locus_tag=ACYKJH_001609;product=exodeoxyribonuclease III;protein_id=HIH2189683.1;transl_table=11 DBLQKK010000030.1 tpg gene 9232 10770 . + . ID=gene-ACYKJH_001610;Name=eptC;gbkey=Gene;gene=eptC;gene_biotype=protein_coding;locus_tag=ACYKJH_001610 DBLQKK010000030.1 Protein Homology CDS 9232 10770 . + 0 ID=cds-HIH2189684.1;Parent=gene-ACYKJH_001610;Dbxref=NCBI_GP:HIH2189684.1;Name=HIH2189684.1;gbkey=CDS;gene=eptC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343698.1;locus_tag=ACYKJH_001610;product=lipid A/FlgG phosphoethanolamine transferase EptC;protein_id=HIH2189684.1;transl_table=11 DBLQKK010000030.1 tpg gene 10767 11123 . + . ID=gene-ACYKJH_001611;Name=dgkA;gbkey=Gene;gene=dgkA;gene_biotype=protein_coding;locus_tag=ACYKJH_001611 DBLQKK010000030.1 Protein Homology CDS 10767 11123 . + 0 ID=cds-HIH2189685.1;Parent=gene-ACYKJH_001611;Dbxref=NCBI_GP:HIH2189685.1;Name=HIH2189685.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872;gbkey=CDS;gene=dgkA;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343699.1;locus_tag=ACYKJH_001611;product=diacylglycerol kinase;protein_id=HIH2189685.1;transl_table=11 DBLQKK010000030.1 tpg pseudogene 11120 11364 . + . ID=gene-ACYKJH_001612;Name=ACYKJH_001612;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001612;pseudo=true DBLQKK010000030.1 Protein Homology CDS 11120 11364 . + 0 ID=cds-ACYKJH_001612;Parent=gene-ACYKJH_001612;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006260,GO:0006276;gbkey=CDS;go_process=DNA replication|0006260||IEA,plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343700.1;locus_tag=ACYKJH_001612;product=replication/maintenance protein RepL;pseudo=true;transl_table=11 DBLQKK010000030.1 tpg gene 11356 12363 . + . ID=gene-ACYKJH_001613;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=ACYKJH_001613 DBLQKK010000030.1 Protein Homology CDS 11356 12363 . + 0 ID=cds-HIH2189686.1;Parent=gene-ACYKJH_001613;Dbxref=NCBI_GP:HIH2189686.1;Name=HIH2189686.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343701.1;locus_tag=ACYKJH_001613;product=dihydroorotase;protein_id=HIH2189686.1;transl_table=11 DBLQKK010000030.1 tpg pseudogene 12395 12609 . - . ID=gene-ACYKJH_001614;Name=ACYKJH_001614;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001614;pseudo=true DBLQKK010000030.1 Protein Homology CDS 12395 12609 . - 0 ID=cds-ACYKJH_001614;Parent=gene-ACYKJH_001614;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343702.1;locus_tag=ACYKJH_001614;product=hypothetical protein;pseudo=true;transl_table=11 DBLQKK010000030.1 tpg gene 12665 13384 . - . ID=gene-ACYKJH_001615;Name=ACYKJH_001615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001615 DBLQKK010000030.1 Protein Homology CDS 12665 13384 . - 0 ID=cds-HIH2189687.1;Parent=gene-ACYKJH_001615;Dbxref=NCBI_GP:HIH2189687.1;Name=HIH2189687.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343703.1;locus_tag=ACYKJH_001615;product=class I SAM-dependent methyltransferase;protein_id=HIH2189687.1;transl_table=11 ##sequence-region DBLQKK010000031.1 1 13014 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000031.1 tpg region 1 13014 . + . ID=DBLQKK010000031.1:1..13014;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000031.1 tpg gene 83 289 . + . ID=gene-ACYKJH_001616;Name=ACYKJH_001616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001616 DBLQKK010000031.1 Protein Homology CDS 83 289 . + 0 ID=cds-HIH2189688.1;Parent=gene-ACYKJH_001616;Dbxref=NCBI_GP:HIH2189688.1;Name=HIH2189688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344384.1;locus_tag=ACYKJH_001616;product=hypothetical protein;protein_id=HIH2189688.1;transl_table=11 DBLQKK010000031.1 tpg gene 292 1053 . - . ID=gene-ACYKJH_001617;Name=ACYKJH_001617;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001617 DBLQKK010000031.1 Protein Homology CDS 292 1053 . - 0 ID=cds-HIH2189689.1;Parent=gene-ACYKJH_001617;Dbxref=NCBI_GP:HIH2189689.1;Name=HIH2189689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344385.1;locus_tag=ACYKJH_001617;product=DUF5416 family protein;protein_id=HIH2189689.1;transl_table=11 DBLQKK010000031.1 tpg gene 1050 2315 . - . ID=gene-ACYKJH_001618;Name=ACYKJH_001618;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001618 DBLQKK010000031.1 Protein Homology CDS 1050 2315 . - 0 ID=cds-HIH2189690.1;Parent=gene-ACYKJH_001618;Dbxref=NCBI_GP:HIH2189690.1;Name=HIH2189690.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344386.1;locus_tag=ACYKJH_001618;product=(Fe-S)-binding protein;protein_id=HIH2189690.1;transl_table=11 DBLQKK010000031.1 tpg gene 2317 3672 . - . ID=gene-ACYKJH_001619;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=ACYKJH_001619 DBLQKK010000031.1 Protein Homology CDS 2317 3672 . - 0 ID=cds-HIH2189691.1;Parent=gene-ACYKJH_001619;Dbxref=NCBI_GP:HIH2189691.1;Name=HIH2189691.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344387.1;locus_tag=ACYKJH_001619;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=HIH2189691.1;transl_table=11 DBLQKK010000031.1 tpg gene 3659 4150 . - . ID=gene-ACYKJH_001620;Name=ACYKJH_001620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001620 DBLQKK010000031.1 Protein Homology CDS 3659 4150 . - 0 ID=cds-HIH2189692.1;Parent=gene-ACYKJH_001620;Dbxref=NCBI_GP:HIH2189692.1;Name=HIH2189692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344388.1;locus_tag=ACYKJH_001620;product=DUF2603 domain-containing protein;protein_id=HIH2189692.1;transl_table=11 DBLQKK010000031.1 tpg gene 4147 5067 . - . ID=gene-ACYKJH_001621;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=ACYKJH_001621 DBLQKK010000031.1 Protein Homology CDS 4147 5067 . - 0 ID=cds-HIH2189693.1;Parent=gene-ACYKJH_001621;Dbxref=NCBI_GP:HIH2189693.1;Name=HIH2189693.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344389.1;locus_tag=ACYKJH_001621;product=ornithine carbamoyltransferase;protein_id=HIH2189693.1;transl_table=11 DBLQKK010000031.1 tpg gene 5064 6047 . - . ID=gene-ACYKJH_001622;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=ACYKJH_001622 DBLQKK010000031.1 Protein Homology CDS 5064 6047 . - 0 ID=cds-HIH2189694.1;Parent=gene-ACYKJH_001622;Dbxref=NCBI_GP:HIH2189694.1;Name=HIH2189694.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344390.1;locus_tag=ACYKJH_001622;product=porphobilinogen synthase;protein_id=HIH2189694.1;transl_table=11 DBLQKK010000031.1 tpg gene 6105 6665 . + . ID=gene-ACYKJH_001623;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=ACYKJH_001623 DBLQKK010000031.1 Protein Homology CDS 6105 6665 . + 0 ID=cds-HIH2189695.1;Parent=gene-ACYKJH_001623;Dbxref=NCBI_GP:HIH2189695.1;Name=HIH2189695.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344391.1;locus_tag=ACYKJH_001623;product=GTP cyclohydrolase II;protein_id=HIH2189695.1;transl_table=11 DBLQKK010000031.1 tpg gene 6666 7232 . + . ID=gene-ACYKJH_001624;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=ACYKJH_001624 DBLQKK010000031.1 Protein Homology CDS 6666 7232 . + 0 ID=cds-HIH2189696.1;Parent=gene-ACYKJH_001624;Dbxref=NCBI_GP:HIH2189696.1;Name=HIH2189696.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344392.1;locus_tag=ACYKJH_001624;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=HIH2189696.1;transl_table=11 DBLQKK010000031.1 tpg gene 7248 7820 . - . ID=gene-ACYKJH_001625;Name=ACYKJH_001625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001625 DBLQKK010000031.1 Protein Homology CDS 7248 7820 . - 0 ID=cds-HIH2189697.1;Parent=gene-ACYKJH_001625;Dbxref=NCBI_GP:HIH2189697.1;Name=HIH2189697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344393.1;locus_tag=ACYKJH_001625;product=hypothetical protein;protein_id=HIH2189697.1;transl_table=11 DBLQKK010000031.1 tpg gene 7915 9012 . - . ID=gene-ACYKJH_001626;Name=ACYKJH_001626;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001626 DBLQKK010000031.1 Protein Homology CDS 7915 9012 . - 0 ID=cds-HIH2189698.1;Parent=gene-ACYKJH_001626;Dbxref=NCBI_GP:HIH2189698.1;Name=HIH2189698.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344394.1;locus_tag=ACYKJH_001626;product=YeiH family protein;protein_id=HIH2189698.1;transl_table=11 DBLQKK010000031.1 tpg gene 9125 10006 . + . ID=gene-ACYKJH_001627;Name=ACYKJH_001627;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001627 DBLQKK010000031.1 Protein Homology CDS 9125 10006 . + 0 ID=cds-HIH2189699.1;Parent=gene-ACYKJH_001627;Dbxref=NCBI_GP:HIH2189699.1;Name=HIH2189699.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344395.1;locus_tag=ACYKJH_001627;product=LysR family transcriptional regulator;protein_id=HIH2189699.1;transl_table=11 DBLQKK010000031.1 tpg gene 10086 11954 . + . ID=gene-ACYKJH_001628;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=ACYKJH_001628 DBLQKK010000031.1 Protein Homology CDS 10086 11954 . + 0 ID=cds-HIH2189700.1;Parent=gene-ACYKJH_001628;Dbxref=NCBI_GP:HIH2189700.1;Name=HIH2189700.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344396.1;locus_tag=ACYKJH_001628;product=RNA polymerase sigma factor RpoD;protein_id=HIH2189700.1;transl_table=11 DBLQKK010000031.1 tpg gene 11970 12482 . - . ID=gene-ACYKJH_001629;Name=ACYKJH_001629;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001629 DBLQKK010000031.1 Protein Homology CDS 11970 12482 . - 0 ID=cds-HIH2189701.1;Parent=gene-ACYKJH_001629;Dbxref=NCBI_GP:HIH2189701.1;Name=HIH2189701.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344397.1;locus_tag=ACYKJH_001629;product=SixA phosphatase family protein;protein_id=HIH2189701.1;transl_table=11 DBLQKK010000031.1 tpg gene 12479 12997 . - . ID=gene-ACYKJH_001630;Name=ACYKJH_001630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001630 DBLQKK010000031.1 Protein Homology CDS 12479 12997 . - 0 ID=cds-HIH2189702.1;Parent=gene-ACYKJH_001630;Dbxref=NCBI_GP:HIH2189702.1;Name=HIH2189702.1;Ontology_term=GO:0006508,GO:0004252,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344398.1;locus_tag=ACYKJH_001630;product=rhomboid family intramembrane serine protease;protein_id=HIH2189702.1;transl_table=11 ##sequence-region DBLQKK010000032.1 1 12780 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000032.1 tpg region 1 12780 . + . ID=DBLQKK010000032.1:1..12780;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000032.1 tpg gene 137 922 . + . ID=gene-ACYKJH_001631;Name=ACYKJH_001631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001631 DBLQKK010000032.1 Protein Homology CDS 137 922 . + 0 ID=cds-HIH2189703.1;Parent=gene-ACYKJH_001631;Dbxref=NCBI_GP:HIH2189703.1;Name=HIH2189703.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343781.1;locus_tag=ACYKJH_001631;product=sulfite exporter TauE/SafE family protein;protein_id=HIH2189703.1;transl_table=11 DBLQKK010000032.1 tpg gene 995 3820 . + . ID=gene-ACYKJH_001632;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=ACYKJH_001632 DBLQKK010000032.1 Protein Homology CDS 995 3820 . + 0 ID=cds-HIH2189704.1;Parent=gene-ACYKJH_001632;Dbxref=NCBI_GP:HIH2189704.1;Name=HIH2189704.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343780.1;locus_tag=ACYKJH_001632;product=excinuclease ABC subunit UvrA;protein_id=HIH2189704.1;transl_table=11 DBLQKK010000032.1 tpg gene 3825 4268 . + . ID=gene-ACYKJH_001633;Name=ACYKJH_001633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001633 DBLQKK010000032.1 Protein Homology CDS 3825 4268 . + 0 ID=cds-HIH2189705.1;Parent=gene-ACYKJH_001633;Dbxref=NCBI_GP:HIH2189705.1;Name=HIH2189705.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343779.1;locus_tag=ACYKJH_001633;product=YqaA family protein;protein_id=HIH2189705.1;transl_table=11 DBLQKK010000032.1 tpg gene 4224 5231 . - . ID=gene-ACYKJH_001634;Name=ACYKJH_001634;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001634 DBLQKK010000032.1 Protein Homology CDS 4224 5231 . - 0 ID=cds-HIH2189706.1;Parent=gene-ACYKJH_001634;Dbxref=NCBI_GP:HIH2189706.1;Name=HIH2189706.1;Ontology_term=GO:0016799;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343778.1;locus_tag=ACYKJH_001634;product=nucleoside hydrolase;protein_id=HIH2189706.1;transl_table=11 DBLQKK010000032.1 tpg pseudogene 5228 6572 . - . ID=gene-ACYKJH_001635;Name=ACYKJH_001635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001635;pseudo=true DBLQKK010000032.1 Protein Homology CDS 5228 6572 . - 0 ID=cds-ACYKJH_001635;Parent=gene-ACYKJH_001635;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343777.1;locus_tag=ACYKJH_001635;product=MFS transporter;pseudo=true;transl_table=11 DBLQKK010000032.1 tpg gene 6736 9375 . + . ID=gene-ACYKJH_001636;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=ACYKJH_001636 DBLQKK010000032.1 Protein Homology CDS 6736 9375 . + 0 ID=cds-HIH2189707.1;Parent=gene-ACYKJH_001636;Dbxref=NCBI_GP:HIH2189707.1;Name=HIH2189707.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343776.1;locus_tag=ACYKJH_001636;product=DNA polymerase I;protein_id=HIH2189707.1;transl_table=11 DBLQKK010000032.1 tpg gene 9391 10167 . + . ID=gene-ACYKJH_001637;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=ACYKJH_001637 DBLQKK010000032.1 Protein Homology CDS 9391 10167 . + 0 ID=cds-HIH2189708.1;Parent=gene-ACYKJH_001637;Dbxref=NCBI_GP:HIH2189708.1;Name=HIH2189708.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343775.1;locus_tag=ACYKJH_001637;product=flagellar motor stator protein MotA;protein_id=HIH2189708.1;transl_table=11 DBLQKK010000032.1 tpg gene 10170 10913 . + . ID=gene-ACYKJH_001638;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=ACYKJH_001638 DBLQKK010000032.1 Protein Homology CDS 10170 10913 . + 0 ID=cds-HIH2189709.1;Parent=gene-ACYKJH_001638;Dbxref=NCBI_GP:HIH2189709.1;Name=HIH2189709.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343774.1;locus_tag=ACYKJH_001638;product=flagellar motor protein MotB;protein_id=HIH2189709.1;transl_table=11 DBLQKK010000032.1 tpg gene 10919 12007 . - . ID=gene-ACYKJH_001639;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=ACYKJH_001639 DBLQKK010000032.1 Protein Homology CDS 10919 12007 . - 0 ID=cds-HIH2189710.1;Parent=gene-ACYKJH_001639;Dbxref=NCBI_GP:HIH2189710.1;Name=HIH2189710.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343773.1;locus_tag=ACYKJH_001639;product=flagellar biosynthesis protein FlhB;protein_id=HIH2189710.1;transl_table=11 DBLQKK010000032.1 tpg gene 12126 12722 . - . ID=gene-ACYKJH_001640;Name=ACYKJH_001640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001640 DBLQKK010000032.1 Protein Homology CDS 12126 12722 . - 0 ID=cds-HIH2189711.1;Parent=gene-ACYKJH_001640;Dbxref=NCBI_GP:HIH2189711.1;Name=HIH2189711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343772.1;locus_tag=ACYKJH_001640;product=peroxiredoxin;protein_id=HIH2189711.1;transl_table=11 ##sequence-region DBLQKK010000033.1 1 11778 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000033.1 tpg region 1 11778 . + . ID=DBLQKK010000033.1:1..11778;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000033.1 tpg gene 1 691 . + . ID=gene-ACYKJH_001641;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=ACYKJH_001641;partial=true;start_range=.,1 DBLQKK010000033.1 Protein Homology CDS 1 691 . + 1 ID=cds-HIH2189712.1;Parent=gene-ACYKJH_001641;Dbxref=NCBI_GP:HIH2189712.1;Name=HIH2189712.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343546.1;locus_tag=ACYKJH_001641;partial=true;product=uracil-DNA glycosylase;protein_id=HIH2189712.1;start_range=.,1;transl_table=11 DBLQKK010000033.1 tpg gene 811 1506 . + . ID=gene-ACYKJH_001642;Name=ACYKJH_001642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001642 DBLQKK010000033.1 Protein Homology CDS 811 1506 . + 0 ID=cds-HIH2189713.1;Parent=gene-ACYKJH_001642;Dbxref=NCBI_GP:HIH2189713.1;Name=HIH2189713.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343545.1;locus_tag=ACYKJH_001642;product=aspartate/glutamate racemase family protein;protein_id=HIH2189713.1;transl_table=11 DBLQKK010000033.1 tpg gene 1700 2824 . - . ID=gene-ACYKJH_001643;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=ACYKJH_001643 DBLQKK010000033.1 Protein Homology CDS 1700 2824 . - 0 ID=cds-HIH2189714.1;Parent=gene-ACYKJH_001643;Dbxref=NCBI_GP:HIH2189714.1;Name=HIH2189714.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343544.1;locus_tag=ACYKJH_001643;product=cytochrome d ubiquinol oxidase subunit II;protein_id=HIH2189714.1;transl_table=11 DBLQKK010000033.1 tpg gene 2824 4386 . - . ID=gene-ACYKJH_001644;Name=ACYKJH_001644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001644 DBLQKK010000033.1 Protein Homology CDS 2824 4386 . - 0 ID=cds-HIH2189715.1;Parent=gene-ACYKJH_001644;Dbxref=NCBI_GP:HIH2189715.1;Name=HIH2189715.1;Ontology_term=GO:0019646,GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343543.1;locus_tag=ACYKJH_001644;product=cytochrome ubiquinol oxidase subunit I;protein_id=HIH2189715.1;transl_table=11 DBLQKK010000033.1 tpg gene 4387 4620 . - . ID=gene-ACYKJH_001645;Name=ACYKJH_001645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001645 DBLQKK010000033.1 Protein Homology CDS 4387 4620 . - 0 ID=cds-HIH2189716.1;Parent=gene-ACYKJH_001645;Dbxref=NCBI_GP:HIH2189716.1;Name=HIH2189716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002928786.1;locus_tag=ACYKJH_001645;product=DUF4492 domain-containing protein;protein_id=HIH2189716.1;transl_table=11 DBLQKK010000033.1 tpg gene 4733 5539 . + . ID=gene-ACYKJH_001646;Name=cdtA;gbkey=Gene;gene=cdtA;gene_biotype=protein_coding;locus_tag=ACYKJH_001646 DBLQKK010000033.1 Protein Homology CDS 4733 5539 . + 0 ID=cds-HIH2189717.1;Parent=gene-ACYKJH_001646;Dbxref=NCBI_GP:HIH2189717.1;Name=HIH2189717.1;gbkey=CDS;gene=cdtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343541.1;locus_tag=ACYKJH_001646;product=cytolethal distending toxin subunit Cj-CdtA;protein_id=HIH2189717.1;transl_table=11 DBLQKK010000033.1 tpg gene 5536 6333 . + . ID=gene-ACYKJH_001647;Name=cdtB;gbkey=Gene;gene=cdtB;gene_biotype=protein_coding;locus_tag=ACYKJH_001647 DBLQKK010000033.1 Protein Homology CDS 5536 6333 . + 0 ID=cds-HIH2189718.1;Parent=gene-ACYKJH_001647;Dbxref=NCBI_GP:HIH2189718.1;Name=HIH2189718.1;gbkey=CDS;gene=cdtB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343540.1;locus_tag=ACYKJH_001647;product=cytolethal distending toxin nuclease subunit Cj-CdtB;protein_id=HIH2189718.1;transl_table=11 DBLQKK010000033.1 tpg gene 6344 6913 . + . ID=gene-ACYKJH_001648;Name=cdtC;gbkey=Gene;gene=cdtC;gene_biotype=protein_coding;locus_tag=ACYKJH_001648 DBLQKK010000033.1 Protein Homology CDS 6344 6913 . + 0 ID=cds-HIH2189719.1;Parent=gene-ACYKJH_001648;Dbxref=NCBI_GP:HIH2189719.1;Name=HIH2189719.1;gbkey=CDS;gene=cdtC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343539.1;locus_tag=ACYKJH_001648;product=cytolethal distending toxin subunit Cj-CdtC;protein_id=HIH2189719.1;transl_table=11 DBLQKK010000033.1 tpg gene 7085 8767 . + . ID=gene-ACYKJH_001649;Name=ACYKJH_001649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001649 DBLQKK010000033.1 Protein Homology CDS 7085 8767 . + 0 ID=cds-HIH2189720.1;Parent=gene-ACYKJH_001649;Dbxref=NCBI_GP:HIH2189720.1;Name=HIH2189720.1;Ontology_term=GO:0015727,GO:0015129,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA,solute:proton symporter activity|0015295||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343538.1;locus_tag=ACYKJH_001649;product=L-lactate permease;protein_id=HIH2189720.1;transl_table=11 DBLQKK010000033.1 tpg gene 8891 9631 . + . ID=gene-ACYKJH_001650;Name=ACYKJH_001650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001650 DBLQKK010000033.1 Protein Homology CDS 8891 9631 . + 0 ID=cds-HIH2189721.1;Parent=gene-ACYKJH_001650;Dbxref=NCBI_GP:HIH2189721.1;Name=HIH2189721.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343537.1;locus_tag=ACYKJH_001650;product=(Fe-S)-binding protein;protein_id=HIH2189721.1;transl_table=11 DBLQKK010000033.1 tpg gene 9628 11067 . + . ID=gene-ACYKJH_001651;Name=ACYKJH_001651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001651 DBLQKK010000033.1 Protein Homology CDS 9628 11067 . + 0 ID=cds-HIH2189722.1;Parent=gene-ACYKJH_001651;Dbxref=NCBI_GP:HIH2189722.1;Name=HIH2189722.1;Ontology_term=GO:0006089,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343536.1;locus_tag=ACYKJH_001651;product=LutB/LldF family L-lactate oxidation iron-sulfur protein;protein_id=HIH2189722.1;transl_table=11 DBLQKK010000033.1 tpg gene 11060 11716 . + . ID=gene-ACYKJH_001652;Name=ACYKJH_001652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001652 DBLQKK010000033.1 Protein Homology CDS 11060 11716 . + 0 ID=cds-HIH2189723.1;Parent=gene-ACYKJH_001652;Dbxref=NCBI_GP:HIH2189723.1;Name=HIH2189723.1;Ontology_term=GO:0006089;gbkey=CDS;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343535.1;locus_tag=ACYKJH_001652;product=LutC/YkgG family protein;protein_id=HIH2189723.1;transl_table=11 ##sequence-region DBLQKK010000034.1 1 11210 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000034.1 tpg region 1 11210 . + . ID=DBLQKK010000034.1:1..11210;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000034.1 tpg gene 1 659 . - . ID=gene-ACYKJH_001653;Name=ACYKJH_001653;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001653;partial=true;start_range=.,1 DBLQKK010000034.1 Protein Homology CDS 1 659 . - 0 ID=cds-HIH2189724.1;Parent=gene-ACYKJH_001653;Dbxref=NCBI_GP:HIH2189724.1;Name=HIH2189724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344708.1;locus_tag=ACYKJH_001653;partial=true;product=DUF115 domain-containing protein;protein_id=HIH2189724.1;start_range=.,1;transl_table=11 DBLQKK010000034.1 tpg gene 659 1429 . - . ID=gene-ACYKJH_001654;Name=ptmA;gbkey=Gene;gene=ptmA;gene_biotype=protein_coding;locus_tag=ACYKJH_001654 DBLQKK010000034.1 Protein Homology CDS 659 1429 . - 0 ID=cds-HIH2189725.1;Parent=gene-ACYKJH_001654;Dbxref=NCBI_GP:HIH2189725.1;Name=HIH2189725.1;Ontology_term=GO:0016616;gbkey=CDS;gene=ptmA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344721.1;locus_tag=ACYKJH_001654;product=flagellin modification protein PtmA;protein_id=HIH2189725.1;transl_table=11 DBLQKK010000034.1 tpg gene 1429 2136 . - . ID=gene-ACYKJH_001655;Name=legF;gbkey=Gene;gene=legF;gene_biotype=protein_coding;gene_synonym=ptmB;locus_tag=ACYKJH_001655 DBLQKK010000034.1 Protein Homology CDS 1429 2136 . - 0 ID=cds-HIH2189726.1;Parent=gene-ACYKJH_001655;Dbxref=NCBI_GP:HIH2189726.1;Name=HIH2189726.1;gbkey=CDS;gene=legF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344720.1;locus_tag=ACYKJH_001655;product=CMP-N%2CN'-diacetyllegionaminic acid synthase;protein_id=HIH2189726.1;transl_table=11 DBLQKK010000034.1 tpg gene 2129 3034 . - . ID=gene-ACYKJH_001656;Name=ptmF;gbkey=Gene;gene=ptmF;gene_biotype=protein_coding;locus_tag=ACYKJH_001656 DBLQKK010000034.1 Protein Homology CDS 2129 3034 . - 0 ID=cds-HIH2189727.1;Parent=gene-ACYKJH_001656;Dbxref=NCBI_GP:HIH2189727.1;Name=HIH2189727.1;gbkey=CDS;gene=ptmF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344719.1;locus_tag=ACYKJH_001656;product=L-glutamine-D-fructose-6-phosphate isomerase subunit;protein_id=HIH2189727.1;transl_table=11 DBLQKK010000034.1 tpg gene 3031 4056 . - . ID=gene-ACYKJH_001657;Name=ACYKJH_001657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001657 DBLQKK010000034.1 Protein Homology CDS 3031 4056 . - 0 ID=cds-HIH2189728.1;Parent=gene-ACYKJH_001657;Dbxref=NCBI_GP:HIH2189728.1;Name=HIH2189728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344718.1;locus_tag=ACYKJH_001657;product=nucleotidyltransferase family protein;protein_id=HIH2189728.1;transl_table=11 DBLQKK010000034.1 tpg gene 4065 5219 . - . ID=gene-ACYKJH_001658;Name=legG;gbkey=Gene;gene=legG;gene_biotype=protein_coding;locus_tag=ACYKJH_001658 DBLQKK010000034.1 Protein Homology CDS 4065 5219 . - 0 ID=cds-HIH2189729.1;Parent=gene-ACYKJH_001658;Dbxref=NCBI_GP:HIH2189729.1;Name=HIH2189729.1;gbkey=CDS;gene=legG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344717.1;locus_tag=ACYKJH_001658;product=GDP-N%2CN'-diacetylbacillosamine 2-epimerase (hydrolyzing);protein_id=HIH2189729.1;transl_table=11 DBLQKK010000034.1 tpg gene 5212 6216 . - . ID=gene-ACYKJH_001659;Name=legI;gbkey=Gene;gene=legI;gene_biotype=protein_coding;locus_tag=ACYKJH_001659 DBLQKK010000034.1 Protein Homology CDS 5212 6216 . - 0 ID=cds-HIH2189730.1;Parent=gene-ACYKJH_001659;Dbxref=NCBI_GP:HIH2189730.1;Name=HIH2189730.1;gbkey=CDS;gene=legI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344716.1;locus_tag=ACYKJH_001659;product=N%2CN'-diacetyllegionaminate synthase;protein_id=HIH2189730.1;transl_table=11 DBLQKK010000034.1 tpg gene 6274 7395 . - . ID=gene-ACYKJH_001660;Name=ACYKJH_001660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001660 DBLQKK010000034.1 Protein Homology CDS 6274 7395 . - 0 ID=cds-HIH2189731.1;Parent=gene-ACYKJH_001660;Dbxref=NCBI_GP:HIH2189731.1;Name=HIH2189731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344714.1;locus_tag=ACYKJH_001660;product=N-acetyl sugar amidotransferase;protein_id=HIH2189731.1;transl_table=11 DBLQKK010000034.1 tpg gene 7512 7898 . - . ID=gene-ACYKJH_001661;Name=ACYKJH_001661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001661 DBLQKK010000034.1 GeneMarkS-2+ CDS 7512 7898 . - 0 ID=cds-HIH2189732.1;Parent=gene-ACYKJH_001661;Dbxref=NCBI_GP:HIH2189732.1;Name=HIH2189732.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_001661;product=hypothetical protein;protein_id=HIH2189732.1;transl_table=11 DBLQKK010000034.1 tpg pseudogene 7901 8217 . - . ID=gene-ACYKJH_001662;Name=ACYKJH_001662;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001662;pseudo=true DBLQKK010000034.1 Protein Homology CDS 7901 8217 . - 0 ID=cds-ACYKJH_001662;Parent=gene-ACYKJH_001662;Note=frameshifted;Ontology_term=GO:0006631,GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002788892.1;locus_tag=ACYKJH_001662;product=3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein;pseudo=true;transl_table=11 DBLQKK010000034.1 tpg gene 8237 8833 . - . ID=gene-ACYKJH_001663;Name=ACYKJH_001663;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001663 DBLQKK010000034.1 Protein Homology CDS 8237 8833 . - 0 ID=cds-HIH2189733.1;Parent=gene-ACYKJH_001663;Dbxref=NCBI_GP:HIH2189733.1;Name=HIH2189733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910212.1;locus_tag=ACYKJH_001663;product=transferase;protein_id=HIH2189733.1;transl_table=11 DBLQKK010000034.1 tpg gene 8943 10097 . - . ID=gene-ACYKJH_001664;Name=legC;gbkey=Gene;gene=legC;gene_biotype=protein_coding;locus_tag=ACYKJH_001664 DBLQKK010000034.1 Protein Homology CDS 8943 10097 . - 0 ID=cds-HIH2189734.1;Parent=gene-ACYKJH_001664;Dbxref=NCBI_GP:HIH2189734.1;Name=HIH2189734.1;gbkey=CDS;gene=legC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344710.1;locus_tag=ACYKJH_001664;product=aminotransferase LegC;protein_id=HIH2189734.1;transl_table=11 DBLQKK010000034.1 tpg gene 10090 11061 . - . ID=gene-ACYKJH_001665;Name=legB;gbkey=Gene;gene=legB;gene_biotype=protein_coding;locus_tag=ACYKJH_001665 DBLQKK010000034.1 Protein Homology CDS 10090 11061 . - 0 ID=cds-HIH2189735.1;Parent=gene-ACYKJH_001665;Dbxref=NCBI_GP:HIH2189735.1;Name=HIH2189735.1;gbkey=CDS;gene=legB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344709.1;locus_tag=ACYKJH_001665;product=4%2C6-dehydratase LegB;protein_id=HIH2189735.1;transl_table=11 DBLQKK010000034.1 tpg gene 11058 11210 . - . ID=gene-ACYKJH_001666;Name=ACYKJH_001666;end_range=11210,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001666;partial=true DBLQKK010000034.1 Protein Homology CDS 11058 11210 . - 0 ID=cds-HIH2189736.1;Parent=gene-ACYKJH_001666;Dbxref=NCBI_GP:HIH2189736.1;Name=HIH2189736.1;end_range=11210,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344708.1;locus_tag=ACYKJH_001666;partial=true;product=hypothetical protein;protein_id=HIH2189736.1;transl_table=11 ##sequence-region DBLQKK010000035.1 1 10635 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000035.1 tpg region 1 10635 . + . ID=DBLQKK010000035.1:1..10635;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000035.1 tpg gene 34 642 . + . ID=gene-ACYKJH_001667;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=ACYKJH_001667 DBLQKK010000035.1 Protein Homology CDS 34 642 . + 0 ID=cds-HIH2189737.1;Parent=gene-ACYKJH_001667;Dbxref=NCBI_GP:HIH2189737.1;Name=HIH2189737.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343795.1;locus_tag=ACYKJH_001667;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=HIH2189737.1;transl_table=11 DBLQKK010000035.1 tpg gene 627 944 . + . ID=gene-ACYKJH_001668;Name=ACYKJH_001668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001668 DBLQKK010000035.1 Protein Homology CDS 627 944 . + 0 ID=cds-HIH2189738.1;Parent=gene-ACYKJH_001668;Dbxref=NCBI_GP:HIH2189738.1;Name=HIH2189738.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343794.1;locus_tag=ACYKJH_001668;product=dihydroneopterin aldolase;protein_id=HIH2189738.1;transl_table=11 DBLQKK010000035.1 tpg gene 1023 1694 . + . ID=gene-ACYKJH_001669;Name=hsrA;gbkey=Gene;gene=hsrA;gene_biotype=protein_coding;locus_tag=ACYKJH_001669 DBLQKK010000035.1 Protein Homology CDS 1023 1694 . + 0 ID=cds-HIH2189739.1;Parent=gene-ACYKJH_001669;Dbxref=NCBI_GP:HIH2189739.1;Name=HIH2189739.1;gbkey=CDS;gene=hsrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343793.1;locus_tag=ACYKJH_001669;product=homeostatic response regulator transcription factor HsrA;protein_id=HIH2189739.1;transl_table=11 DBLQKK010000035.1 tpg gene 1807 2052 . + . ID=gene-ACYKJH_001670;Name=ACYKJH_001670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001670 DBLQKK010000035.1 Protein Homology CDS 1807 2052 . + 0 ID=cds-HIH2189740.1;Parent=gene-ACYKJH_001670;Dbxref=NCBI_GP:HIH2189740.1;Name=HIH2189740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343792.1;locus_tag=ACYKJH_001670;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=HIH2189740.1;transl_table=11 DBLQKK010000035.1 tpg gene 2052 3512 . + . ID=gene-ACYKJH_001671;Name=ACYKJH_001671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001671 DBLQKK010000035.1 Protein Homology CDS 2052 3512 . + 0 ID=cds-HIH2189741.1;Parent=gene-ACYKJH_001671;Dbxref=NCBI_GP:HIH2189741.1;Name=HIH2189741.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343791.1;locus_tag=ACYKJH_001671;product=Ppx/GppA phosphatase family protein;protein_id=HIH2189741.1;transl_table=11 DBLQKK010000035.1 tpg gene 3509 4306 . - . ID=gene-ACYKJH_001672;Name=ACYKJH_001672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001672 DBLQKK010000035.1 Protein Homology CDS 3509 4306 . - 0 ID=cds-HIH2189742.1;Parent=gene-ACYKJH_001672;Dbxref=NCBI_GP:HIH2189742.1;Name=HIH2189742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343790.1;locus_tag=ACYKJH_001672;product=hypothetical protein;protein_id=HIH2189742.1;transl_table=11 DBLQKK010000035.1 tpg gene 4307 4615 . - . ID=gene-ACYKJH_001673;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=ACYKJH_001673 DBLQKK010000035.1 Protein Homology CDS 4307 4615 . - 0 ID=cds-HIH2189743.1;Parent=gene-ACYKJH_001673;Dbxref=NCBI_GP:HIH2189743.1;Name=HIH2189743.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009425;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum basal body|0009425||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343789.1;locus_tag=ACYKJH_001673;product=flagellar motor switch protein FliN;protein_id=HIH2189743.1;transl_table=11 DBLQKK010000035.1 tpg gene 4615 5037 . - . ID=gene-ACYKJH_001674;Name=ACYKJH_001674;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001674 DBLQKK010000035.1 Protein Homology CDS 4615 5037 . - 0 ID=cds-HIH2189744.1;Parent=gene-ACYKJH_001674;Dbxref=NCBI_GP:HIH2189744.1;Name=HIH2189744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343788.1;locus_tag=ACYKJH_001674;product=chemotaxis protein CheX;protein_id=HIH2189744.1;transl_table=11 DBLQKK010000035.1 tpg gene 5108 5857 . - . ID=gene-ACYKJH_001675;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=ACYKJH_001675 DBLQKK010000035.1 Protein Homology CDS 5108 5857 . - 0 ID=cds-HIH2189745.1;Parent=gene-ACYKJH_001675;Dbxref=NCBI_GP:HIH2189745.1;Name=HIH2189745.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343787.1;locus_tag=ACYKJH_001675;product=tryptophan synthase subunit alpha;protein_id=HIH2189745.1;transl_table=11 DBLQKK010000035.1 tpg gene 5850 7028 . - . ID=gene-ACYKJH_001676;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=ACYKJH_001676 DBLQKK010000035.1 Protein Homology CDS 5850 7028 . - 0 ID=cds-HIH2189746.1;Parent=gene-ACYKJH_001676;Dbxref=NCBI_GP:HIH2189746.1;Name=HIH2189746.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343786.1;locus_tag=ACYKJH_001676;product=tryptophan synthase subunit beta;protein_id=HIH2189746.1;transl_table=11 DBLQKK010000035.1 tpg gene 7025 7624 . - . ID=gene-ACYKJH_001677;Name=ACYKJH_001677;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001677 DBLQKK010000035.1 Protein Homology CDS 7025 7624 . - 0 ID=cds-HIH2189747.1;Parent=gene-ACYKJH_001677;Dbxref=NCBI_GP:HIH2189747.1;Name=HIH2189747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343785.1;locus_tag=ACYKJH_001677;product=phosphoribosylanthranilate isomerase;protein_id=HIH2189747.1;transl_table=11 DBLQKK010000035.1 tpg gene 7611 9212 . - . ID=gene-ACYKJH_001678;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=ACYKJH_001678 DBLQKK010000035.1 Protein Homology CDS 7611 9212 . - 0 ID=cds-HIH2189748.1;Parent=gene-ACYKJH_001678;Dbxref=NCBI_GP:HIH2189748.1;Name=HIH2189748.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343784.1;locus_tag=ACYKJH_001678;product=anthranilate phosphoribosyltransferase;protein_id=HIH2189748.1;transl_table=11 DBLQKK010000035.1 tpg gene 9209 10459 . - . ID=gene-ACYKJH_001679;Name=ACYKJH_001679;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001679 DBLQKK010000035.1 Protein Homology CDS 9209 10459 . - 0 ID=cds-HIH2189749.1;Parent=gene-ACYKJH_001679;Dbxref=NCBI_GP:HIH2189749.1;Name=HIH2189749.1;Ontology_term=GO:0009058,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343783.1;locus_tag=ACYKJH_001679;product=anthranilate synthase component I family protein;protein_id=HIH2189749.1;transl_table=11 ##sequence-region DBLQKK010000036.1 1 10014 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000036.1 tpg region 1 10014 . + . ID=DBLQKK010000036.1:1..10014;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000036.1 tpg gene 1 646 . - . ID=gene-ACYKJH_001680;Name=ACYKJH_001680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001680;partial=true;start_range=.,1 DBLQKK010000036.1 Protein Homology CDS 1 646 . - 0 ID=cds-HIH2189750.1;Parent=gene-ACYKJH_001680;Dbxref=NCBI_GP:HIH2189750.1;Name=HIH2189750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343509.1;locus_tag=ACYKJH_001680;partial=true;product=poly(A) polymerase;protein_id=HIH2189750.1;start_range=.,1;transl_table=11 DBLQKK010000036.1 tpg gene 646 2454 . - . ID=gene-ACYKJH_001681;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=ACYKJH_001681 DBLQKK010000036.1 Protein Homology CDS 646 2454 . - 0 ID=cds-HIH2189751.1;Parent=gene-ACYKJH_001681;Dbxref=NCBI_GP:HIH2189751.1;Name=HIH2189751.1;Ontology_term=GO:0006412,GO:0006950,GO:0003924,GO:0005525;gbkey=CDS;gene=typA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343510.1;locus_tag=ACYKJH_001681;product=translational GTPase TypA;protein_id=HIH2189751.1;transl_table=11 DBLQKK010000036.1 tpg gene 2589 2912 . + . ID=gene-ACYKJH_001682;Name=ACYKJH_001682;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001682 DBLQKK010000036.1 Protein Homology CDS 2589 2912 . + 0 ID=cds-HIH2189752.1;Parent=gene-ACYKJH_001682;Dbxref=NCBI_GP:HIH2189752.1;Name=HIH2189752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343511.1;locus_tag=ACYKJH_001682;product=hypothetical protein;protein_id=HIH2189752.1;transl_table=11 DBLQKK010000036.1 tpg gene 2929 4722 . + . ID=gene-ACYKJH_001683;Name=ACYKJH_001683;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001683 DBLQKK010000036.1 Protein Homology CDS 2929 4722 . + 0 ID=cds-HIH2189753.1;Parent=gene-ACYKJH_001683;Dbxref=NCBI_GP:HIH2189753.1;Name=HIH2189753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343512.1;locus_tag=ACYKJH_001683;product=flagellar hook-length control protein FliK;protein_id=HIH2189753.1;transl_table=11 DBLQKK010000036.1 tpg gene 4776 5660 . + . ID=gene-ACYKJH_001684;Name=ACYKJH_001684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001684 DBLQKK010000036.1 Protein Homology CDS 4776 5660 . + 0 ID=cds-HIH2189754.1;Parent=gene-ACYKJH_001684;Dbxref=NCBI_GP:HIH2189754.1;Name=HIH2189754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343513.1;locus_tag=ACYKJH_001684;product=flagellar basal body rod modification protein;protein_id=HIH2189754.1;transl_table=11 DBLQKK010000036.1 tpg gene 5664 7301 . + . ID=gene-ACYKJH_001685;Name=ACYKJH_001685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001685 DBLQKK010000036.1 Protein Homology CDS 5664 7301 . + 0 ID=cds-HIH2189755.1;Parent=gene-ACYKJH_001685;Dbxref=NCBI_GP:HIH2189755.1;Name=HIH2189755.1;Ontology_term=GO:0071973;gbkey=CDS;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343514.1;locus_tag=ACYKJH_001685;product=flagellar hook protein FlgE;protein_id=HIH2189755.1;transl_table=11 DBLQKK010000036.1 tpg gene 7305 9176 . - . ID=gene-ACYKJH_001686;Name=ACYKJH_001686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001686 DBLQKK010000036.1 Protein Homology CDS 7305 9176 . - 0 ID=cds-HIH2189756.1;Parent=gene-ACYKJH_001686;Dbxref=NCBI_GP:HIH2189756.1;Name=HIH2189756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343515.1;locus_tag=ACYKJH_001686;product=flagellar assembly protein A;protein_id=HIH2189756.1;transl_table=11 DBLQKK010000036.1 tpg gene 9133 9897 . - . ID=gene-ACYKJH_001687;Name=ACYKJH_001687;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001687 DBLQKK010000036.1 Protein Homology CDS 9133 9897 . - 0 ID=cds-HIH2189757.1;Parent=gene-ACYKJH_001687;Dbxref=NCBI_GP:HIH2189757.1;Name=HIH2189757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002873756.1;locus_tag=ACYKJH_001687;product=hemerythrin family protein;protein_id=HIH2189757.1;transl_table=11 ##sequence-region DBLQKK010000037.1 1 7026 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000037.1 tpg region 1 7026 . + . ID=DBLQKK010000037.1:1..7026;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000037.1 tpg gene 346 2658 . + . ID=gene-ACYKJH_001688;Name=ACYKJH_001688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001688 DBLQKK010000037.1 Protein Homology CDS 346 2658 . + 0 ID=cds-HIH2189758.1;Parent=gene-ACYKJH_001688;Dbxref=NCBI_GP:HIH2189758.1;Name=HIH2189758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013463468.1;locus_tag=ACYKJH_001688;product=hypothetical protein;protein_id=HIH2189758.1;transl_table=11 DBLQKK010000037.1 tpg gene 2670 2903 . + . ID=gene-ACYKJH_001689;Name=ACYKJH_001689;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001689 DBLQKK010000037.1 GeneMarkS-2+ CDS 2670 2903 . + 0 ID=cds-HIH2189759.1;Parent=gene-ACYKJH_001689;Dbxref=NCBI_GP:HIH2189759.1;Name=HIH2189759.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_001689;product=hypothetical protein;protein_id=HIH2189759.1;transl_table=11 DBLQKK010000037.1 tpg gene 3003 3188 . + . ID=gene-ACYKJH_001690;Name=ACYKJH_001690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001690 DBLQKK010000037.1 GeneMarkS-2+ CDS 3003 3188 . + 0 ID=cds-HIH2189760.1;Parent=gene-ACYKJH_001690;Dbxref=NCBI_GP:HIH2189760.1;Name=HIH2189760.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_001690;product=hypothetical protein;protein_id=HIH2189760.1;transl_table=11 DBLQKK010000037.1 tpg pseudogene 4269 5195 . + . ID=gene-ACYKJH_001691;Name=ACYKJH_001691;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001691;pseudo=true DBLQKK010000037.1 Protein Homology CDS 4269 5195 . + 0 ID=cds-ACYKJH_001691;Parent=gene-ACYKJH_001691;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019108996.1;locus_tag=ACYKJH_001691;product=hypothetical protein;pseudo=true;transl_table=11 DBLQKK010000037.1 tpg gene 5678 5815 . + . ID=gene-ACYKJH_001692;Name=ACYKJH_001692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001692 DBLQKK010000037.1 Protein Homology CDS 5678 5815 . + 0 ID=cds-HIH2189761.1;Parent=gene-ACYKJH_001692;Dbxref=NCBI_GP:HIH2189761.1;Name=HIH2189761.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020068.6;locus_tag=ACYKJH_001692;product=hypothetical protein;protein_id=HIH2189761.1;transl_table=11 DBLQKK010000037.1 tpg gene 5787 6029 . + . ID=gene-ACYKJH_001693;Name=ACYKJH_001693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001693 DBLQKK010000037.1 GeneMarkS-2+ CDS 5787 6029 . + 0 ID=cds-HIH2189762.1;Parent=gene-ACYKJH_001693;Dbxref=NCBI_GP:HIH2189762.1;Name=HIH2189762.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_001693;product=hypothetical protein;protein_id=HIH2189762.1;transl_table=11 DBLQKK010000037.1 tpg gene 6280 6597 . + . ID=gene-ACYKJH_001694;Name=ACYKJH_001694;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001694 DBLQKK010000037.1 GeneMarkS-2+ CDS 6280 6597 . + 0 ID=cds-HIH2189763.1;Parent=gene-ACYKJH_001694;Dbxref=NCBI_GP:HIH2189763.1;Name=HIH2189763.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_001694;product=hypothetical protein;protein_id=HIH2189763.1;transl_table=11 DBLQKK010000037.1 tpg gene 6751 7005 . + . ID=gene-ACYKJH_001695;Name=ACYKJH_001695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001695 DBLQKK010000037.1 GeneMarkS-2+ CDS 6751 7005 . + 0 ID=cds-HIH2189764.1;Parent=gene-ACYKJH_001695;Dbxref=NCBI_GP:HIH2189764.1;Name=HIH2189764.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_001695;product=hypothetical protein;protein_id=HIH2189764.1;transl_table=11 ##sequence-region DBLQKK010000038.1 1 6496 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000038.1 tpg region 1 6496 . + . ID=DBLQKK010000038.1:1..6496;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000038.1 tpg gene 115 777 . + . ID=gene-ACYKJH_001696;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=ACYKJH_001696 DBLQKK010000038.1 Protein Homology CDS 115 777 . + 0 ID=cds-HIH2189765.1;Parent=gene-ACYKJH_001696;Dbxref=NCBI_GP:HIH2189765.1;Name=HIH2189765.1;gbkey=CDS;gene=sodB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343628.1;locus_tag=ACYKJH_001696;product=superoxide dismutase [Fe];protein_id=HIH2189765.1;transl_table=11 DBLQKK010000038.1 tpg gene 846 1064 . + . ID=gene-ACYKJH_001697;Name=ACYKJH_001697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001697 DBLQKK010000038.1 Protein Homology CDS 846 1064 . + 0 ID=cds-HIH2189766.1;Parent=gene-ACYKJH_001697;Dbxref=NCBI_GP:HIH2189766.1;Name=HIH2189766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002862379.1;locus_tag=ACYKJH_001697;product=hypothetical protein;protein_id=HIH2189766.1;transl_table=11 DBLQKK010000038.1 tpg gene 1174 1536 . + . ID=gene-ACYKJH_001698;Name=ACYKJH_001698;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001698 DBLQKK010000038.1 Protein Homology CDS 1174 1536 . + 0 ID=cds-HIH2189767.1;Parent=gene-ACYKJH_001698;Dbxref=NCBI_GP:HIH2189767.1;Name=HIH2189767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002816314.1;locus_tag=ACYKJH_001698;product=methyltransferase;protein_id=HIH2189767.1;transl_table=11 DBLQKK010000038.1 tpg gene 1549 2754 . - . ID=gene-ACYKJH_001699;Name=ACYKJH_001699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001699 DBLQKK010000038.1 Protein Homology CDS 1549 2754 . - 0 ID=cds-HIH2189768.1;Parent=gene-ACYKJH_001699;Dbxref=NCBI_GP:HIH2189768.1;Name=HIH2189768.1;Ontology_term=GO:0009085,GO:0016646,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-NH group of donors%2C NAD or NADP as acceptor|0016646||IEA,NAD+ binding|0070403||IEA;go_process=lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343630.1;locus_tag=ACYKJH_001699;product=saccharopine dehydrogenase family protein;protein_id=HIH2189768.1;transl_table=11 DBLQKK010000038.1 tpg gene 2796 3704 . - . ID=gene-ACYKJH_001700;Name=ACYKJH_001700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001700 DBLQKK010000038.1 Protein Homology CDS 2796 3704 . - 0 ID=cds-HIH2189769.1;Parent=gene-ACYKJH_001700;Dbxref=NCBI_GP:HIH2189769.1;Name=HIH2189769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343631.1;locus_tag=ACYKJH_001700;product=ABC transporter ATP-binding protein;protein_id=HIH2189769.1;transl_table=11 DBLQKK010000038.1 tpg gene 3688 5304 . - . ID=gene-ACYKJH_001701;Name=ACYKJH_001701;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001701 DBLQKK010000038.1 Protein Homology CDS 3688 5304 . - 0 ID=cds-HIH2189770.1;Parent=gene-ACYKJH_001701;Dbxref=NCBI_GP:HIH2189770.1;Name=HIH2189770.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343632.1;locus_tag=ACYKJH_001701;product=ABC transporter permease;protein_id=HIH2189770.1;transl_table=11 DBLQKK010000038.1 tpg gene 5304 6308 . - . ID=gene-ACYKJH_001702;Name=ACYKJH_001702;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001702 DBLQKK010000038.1 Protein Homology CDS 5304 6308 . - 0 ID=cds-HIH2189771.1;Parent=gene-ACYKJH_001702;Dbxref=NCBI_GP:HIH2189771.1;Name=HIH2189771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343633.1;locus_tag=ACYKJH_001702;product=Fe(3+) ABC transporter substrate-binding protein;protein_id=HIH2189771.1;transl_table=11 DBLQKK010000038.1 tpg gene 6305 6436 . - . ID=gene-ACYKJH_001703;Name=ACYKJH_001703;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001703 DBLQKK010000038.1 Protein Homology CDS 6305 6436 . - 0 ID=cds-HIH2189772.1;Parent=gene-ACYKJH_001703;Dbxref=NCBI_GP:HIH2189772.1;Name=HIH2189772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343634.1;locus_tag=ACYKJH_001703;product=lipoprotein;protein_id=HIH2189772.1;transl_table=11 ##sequence-region DBLQKK010000039.1 1 5516 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000039.1 tpg region 1 5516 . + . ID=DBLQKK010000039.1:1..5516;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000039.1 tpg gene 1 1592 . + . ID=gene-ACYKJH_001704;Name=ACYKJH_001704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001704;partial=true;start_range=.,1 DBLQKK010000039.1 Protein Homology CDS 1 1592 . + 2 ID=cds-HIH2189773.1;Parent=gene-ACYKJH_001704;Dbxref=NCBI_GP:HIH2189773.1;Name=HIH2189773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343599.1;locus_tag=ACYKJH_001704;partial=true;product=McrB family protein;protein_id=HIH2189773.1;start_range=.,1;transl_table=11 DBLQKK010000039.1 tpg gene 1585 2916 . + . ID=gene-ACYKJH_001705;Name=ACYKJH_001705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001705 DBLQKK010000039.1 Protein Homology CDS 1585 2916 . + 0 ID=cds-HIH2189774.1;Parent=gene-ACYKJH_001705;Dbxref=NCBI_GP:HIH2189774.1;Name=HIH2189774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343600.1;locus_tag=ACYKJH_001705;product=McrC family protein;protein_id=HIH2189774.1;transl_table=11 DBLQKK010000039.1 tpg gene 2905 3708 . - . ID=gene-ACYKJH_001706;Name=ACYKJH_001706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001706 DBLQKK010000039.1 Protein Homology CDS 2905 3708 . - 0 ID=cds-HIH2189775.1;Parent=gene-ACYKJH_001706;Dbxref=NCBI_GP:HIH2189775.1;Name=HIH2189775.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343601.1;locus_tag=ACYKJH_001706;product=metal ABC transporter permease;protein_id=HIH2189775.1;transl_table=11 DBLQKK010000039.1 tpg gene 3701 4555 . - . ID=gene-ACYKJH_001707;Name=ACYKJH_001707;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001707 DBLQKK010000039.1 Protein Homology CDS 3701 4555 . - 0 ID=cds-HIH2189776.1;Parent=gene-ACYKJH_001707;Dbxref=NCBI_GP:HIH2189776.1;Name=HIH2189776.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343602.1;locus_tag=ACYKJH_001707;product=ABC transporter ATP-binding protein;protein_id=HIH2189776.1;transl_table=11 DBLQKK010000039.1 tpg gene 4568 5458 . - . ID=gene-ACYKJH_001708;Name=ACYKJH_001708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001708 DBLQKK010000039.1 Protein Homology CDS 4568 5458 . - 0 ID=cds-HIH2189777.1;Parent=gene-ACYKJH_001708;Dbxref=NCBI_GP:HIH2189777.1;Name=HIH2189777.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343603.1;locus_tag=ACYKJH_001708;product=metal ABC transporter solute-binding protein%2C Zn/Mn family;protein_id=HIH2189777.1;transl_table=11 ##sequence-region DBLQKK010000040.1 1 3221 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000040.1 tpg region 1 3221 . + . ID=DBLQKK010000040.1:1..3221;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000040.1 tpg gene 1 1155 . + . ID=gene-ACYKJH_001709;Name=ACYKJH_001709;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001709;partial=true;start_range=.,1 DBLQKK010000040.1 Protein Homology CDS 1 1155 . + 0 ID=cds-HIH2189778.1;Parent=gene-ACYKJH_001709;Dbxref=NCBI_GP:HIH2189778.1;Name=HIH2189778.1;Ontology_term=GO:0071973,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344726.1;locus_tag=ACYKJH_001709;partial=true;product=flagellin;protein_id=HIH2189778.1;start_range=.,1;transl_table=11 DBLQKK010000040.1 tpg gene 1186 3072 . - . ID=gene-ACYKJH_001710;Name=ACYKJH_001710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001710 DBLQKK010000040.1 Protein Homology CDS 1186 3072 . - 0 ID=cds-HIH2189779.1;Parent=gene-ACYKJH_001710;Dbxref=NCBI_GP:HIH2189779.1;Name=HIH2189779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344725.1;locus_tag=ACYKJH_001710;product=motility associated factor glycosyltransferase family protein;protein_id=HIH2189779.1;transl_table=11 DBLQKK010000040.1 tpg gene 3069 3221 . - . ID=gene-ACYKJH_001711;Name=ACYKJH_001711;end_range=3221,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001711;partial=true DBLQKK010000040.1 Protein Homology CDS 3069 3221 . - 0 ID=cds-HIH2189780.1;Parent=gene-ACYKJH_001711;Dbxref=NCBI_GP:HIH2189780.1;Name=HIH2189780.1;end_range=3221,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344708.1;locus_tag=ACYKJH_001711;partial=true;product=hypothetical protein;protein_id=HIH2189780.1;transl_table=11 ##sequence-region DBLQKK010000041.1 1 3128 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000041.1 tpg region 1 3128 . + . ID=DBLQKK010000041.1:1..3128;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000041.1 tpg gene 1 1092 . + . ID=gene-ACYKJH_001712;Name=ACYKJH_001712;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001712;partial=true;start_range=.,1 DBLQKK010000041.1 Protein Homology CDS 1 1092 . + 0 ID=cds-HIH2189781.1;Parent=gene-ACYKJH_001712;Dbxref=NCBI_GP:HIH2189781.1;Name=HIH2189781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344722.1;locus_tag=ACYKJH_001712;partial=true;product=6-hydroxymethylpterin diphosphokinase MptE-like protein;protein_id=HIH2189781.1;start_range=.,1;transl_table=11 DBLQKK010000041.1 tpg gene 1089 2948 . + . ID=gene-ACYKJH_001713;Name=ACYKJH_001713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001713 DBLQKK010000041.1 Protein Homology CDS 1089 2948 . + 0 ID=cds-HIH2189782.1;Parent=gene-ACYKJH_001713;Dbxref=NCBI_GP:HIH2189782.1;Name=HIH2189782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344723.1;locus_tag=ACYKJH_001713;product=motility associated factor glycosyltransferase family protein;protein_id=HIH2189782.1;transl_table=11 DBLQKK010000041.1 tpg gene 2961 3128 . + . ID=gene-ACYKJH_001714;Name=ACYKJH_001714;end_range=3128,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001714;partial=true DBLQKK010000041.1 Protein Homology CDS 2961 3128 . + 0 ID=cds-HIH2189783.1;Parent=gene-ACYKJH_001714;Dbxref=NCBI_GP:HIH2189783.1;Name=HIH2189783.1;end_range=3128,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344708.1;locus_tag=ACYKJH_001714;partial=true;product=hypothetical protein;protein_id=HIH2189783.1;transl_table=11 ##sequence-region DBLQKK010000042.1 1 2043 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000042.1 tpg region 1 2043 . + . ID=DBLQKK010000042.1:1..2043;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000042.1 tpg gene 30 905 . - . ID=gene-ACYKJH_001715;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=ACYKJH_001715 DBLQKK010000042.1 Protein Homology CDS 30 905 . - 0 ID=cds-HIH2189784.1;Parent=gene-ACYKJH_001715;Dbxref=NCBI_GP:HIH2189784.1;Name=HIH2189784.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002919197.1;locus_tag=ACYKJH_001715;product=zinc transporter ZupT;protein_id=HIH2189784.1;transl_table=11 DBLQKK010000042.1 tpg gene 1098 2043 . + . ID=gene-ACYKJH_001716;Name=ACYKJH_001716;end_range=2043,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001716;partial=true DBLQKK010000042.1 Protein Homology CDS 1098 2043 . + 0 ID=cds-HIH2189785.1;Parent=gene-ACYKJH_001716;Dbxref=NCBI_GP:HIH2189785.1;Name=HIH2189785.1;Ontology_term=GO:0007165;end_range=2043,.;gbkey=CDS;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014517176.1;locus_tag=ACYKJH_001716;partial=true;product=PDC sensor domain-containing protein;protein_id=HIH2189785.1;transl_table=11 ##sequence-region DBLQKK010000043.1 1 1940 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000043.1 tpg region 1 1940 . + . ID=DBLQKK010000043.1:1..1940;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000043.1 tpg gene 62 1940 . + . ID=gene-ACYKJH_001717;Name=ACYKJH_001717;end_range=1940,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001717;partial=true DBLQKK010000043.1 Protein Homology CDS 62 1940 . + 0 ID=cds-HIH2189786.1;Parent=gene-ACYKJH_001717;Dbxref=NCBI_GP:HIH2189786.1;Name=HIH2189786.1;end_range=1940,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009882950.1;locus_tag=ACYKJH_001717;partial=true;product=hypothetical protein;protein_id=HIH2189786.1;transl_table=11 ##sequence-region DBLQKK010000044.1 1 1512 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000044.1 tpg region 1 1512 . + . ID=DBLQKK010000044.1:1..1512;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000044.1 tpg gene 1 213 . - . ID=gene-ACYKJH_001718;Name=ACYKJH_001718;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001718;partial=true;start_range=.,1 DBLQKK010000044.1 Protein Homology CDS 1 213 . - 0 ID=cds-HIH2189787.1;Parent=gene-ACYKJH_001718;Dbxref=NCBI_GP:HIH2189787.1;Name=HIH2189787.1;Note=FlaA%3B structural flagella protein%3B in Helicobacter the flagella are composed of flagellin A and flagellin B%3B the amounts of each seem to be controlled by environmental conditions;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344726.1;locus_tag=ACYKJH_001718;partial=true;product=flagellin;protein_id=HIH2189787.1;start_range=.,1;transl_table=11 DBLQKK010000044.1 tpg gene 358 1512 . - . ID=gene-ACYKJH_001719;Name=ACYKJH_001719;end_range=1512,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001719;partial=true DBLQKK010000044.1 Protein Homology CDS 358 1512 . - 0 ID=cds-HIH2189788.1;Parent=gene-ACYKJH_001719;Dbxref=NCBI_GP:HIH2189788.1;Name=HIH2189788.1;Ontology_term=GO:0071973,GO:0005198;end_range=1512,.;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344727.1;locus_tag=ACYKJH_001719;partial=true;product=flagellin;protein_id=HIH2189788.1;transl_table=11 ##sequence-region DBLQKK010000045.1 1 1402 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000045.1 tpg region 1 1402 . + . ID=DBLQKK010000045.1:1..1402;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000045.1 tpg gene 38 781 . + . ID=gene-ACYKJH_001720;Name=ACYKJH_001720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001720 DBLQKK010000045.1 Protein Homology CDS 38 781 . + 0 ID=cds-HIH2189789.1;Parent=gene-ACYKJH_001720;Dbxref=NCBI_GP:HIH2189789.1;Name=HIH2189789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344996.1;locus_tag=ACYKJH_001720;product=DUF4261 domain-containing protein;protein_id=HIH2189789.1;transl_table=11 DBLQKK010000045.1 tpg gene 847 1263 . + . ID=gene-ACYKJH_001721;Name=ACYKJH_001721;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001721 DBLQKK010000045.1 Protein Homology CDS 847 1263 . + 0 ID=cds-HIH2189790.1;Parent=gene-ACYKJH_001721;Dbxref=NCBI_GP:HIH2189790.1;Name=HIH2189790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344995.1;locus_tag=ACYKJH_001721;product=PepSY-like domain-containing protein;protein_id=HIH2189790.1;transl_table=11 ##sequence-region DBLQKK010000046.1 1 1360 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000046.1 tpg region 1 1360 . + . ID=DBLQKK010000046.1:1..1360;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000046.1 tpg gene 166 1197 . + . ID=gene-ACYKJH_001722;Name=pseI;gbkey=Gene;gene=pseI;gene_biotype=protein_coding;locus_tag=ACYKJH_001722 DBLQKK010000046.1 Protein Homology CDS 166 1197 . + 0 ID=cds-HIH2189791.1;Parent=gene-ACYKJH_001722;Dbxref=NCBI_GP:HIH2189791.1;Name=HIH2189791.1;Ontology_term=GO:0016765;gbkey=CDS;gene=pseI;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344707.1;locus_tag=ACYKJH_001722;product=pseudaminic acid synthase;protein_id=HIH2189791.1;transl_table=11 DBLQKK010000046.1 tpg gene 1194 1360 . + . ID=gene-ACYKJH_001723;Name=ACYKJH_001723;end_range=1360,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001723;partial=true DBLQKK010000046.1 Protein Homology CDS 1194 1360 . + 0 ID=cds-HIH2189792.1;Parent=gene-ACYKJH_001723;Dbxref=NCBI_GP:HIH2189792.1;Name=HIH2189792.1;end_range=1360,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344708.1;locus_tag=ACYKJH_001723;partial=true;product=hypothetical protein;protein_id=HIH2189792.1;transl_table=11 ##sequence-region DBLQKK010000047.1 1 978 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000047.1 tpg region 1 978 . + . ID=DBLQKK010000047.1:1..978;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000047.1 tpg gene 1 900 . - . ID=gene-ACYKJH_001724;Name=ACYKJH_001724;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001724;partial=true;start_range=.,1 DBLQKK010000047.1 Protein Homology CDS 1 900 . - 0 ID=cds-HIH2189793.1;Parent=gene-ACYKJH_001724;Dbxref=NCBI_GP:HIH2189793.1;Name=HIH2189793.1;Ontology_term=GO:0007165;gbkey=CDS;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343604.1;locus_tag=ACYKJH_001724;partial=true;product=cache domain-containing protein;protein_id=HIH2189793.1;start_range=.,1;transl_table=11 ##sequence-region DBLQKK010000048.1 1 945 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000048.1 tpg region 1 945 . + . ID=DBLQKK010000048.1:1..945;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000048.1 tpg gene 49 945 . + . ID=gene-ACYKJH_001725;Name=ACYKJH_001725;end_range=945,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001725;partial=true DBLQKK010000048.1 Protein Homology CDS 49 945 . + 0 ID=cds-HIH2189794.1;Parent=gene-ACYKJH_001725;Dbxref=NCBI_GP:HIH2189794.1;Name=HIH2189794.1;Ontology_term=GO:0007165;end_range=945,.;gbkey=CDS;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002851408.1;locus_tag=ACYKJH_001725;partial=true;product=cache domain-containing protein;protein_id=HIH2189794.1;transl_table=11 ##sequence-region DBLQKK010000049.1 1 725 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000049.1 tpg region 1 725 . + . ID=DBLQKK010000049.1:1..725;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000049.1 tpg gene 1 725 . + . ID=gene-ACYKJH_001726;Name=ACYKJH_001726;end_range=725,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001726;partial=true;start_range=.,1 DBLQKK010000049.1 Protein Homology CDS 1 725 . + 1 ID=cds-HIH2189795.1;Parent=gene-ACYKJH_001726;Dbxref=NCBI_GP:HIH2189795.1;Name=HIH2189795.1;end_range=725,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344728.1;locus_tag=ACYKJH_001726;partial=true;product=motility associated factor glycosyltransferase family protein;protein_id=HIH2189795.1;start_range=.,1;transl_table=11 ##sequence-region DBLQKK010000050.1 1 664 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000050.1 tpg region 1 664 . + . ID=DBLQKK010000050.1:1..664;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000050.1 tpg gene 1 664 . - . ID=gene-ACYKJH_001727;Name=ACYKJH_001727;end_range=664,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001727;partial=true;start_range=.,1 DBLQKK010000050.1 Protein Homology CDS 1 664 . - 0 ID=cds-HIH2189796.1;Parent=gene-ACYKJH_001727;Dbxref=NCBI_GP:HIH2189796.1;Name=HIH2189796.1;end_range=664,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344728.1;locus_tag=ACYKJH_001727;partial=true;product=6-hydroxymethylpterin diphosphokinase MptE-like protein;protein_id=HIH2189796.1;start_range=.,1;transl_table=11 ##sequence-region DBLQKK010000051.1 1 658 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000051.1 tpg region 1 658 . + . ID=DBLQKK010000051.1:1..658;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000051.1 tpg gene 1 658 . - . ID=gene-ACYKJH_001728;Name=ACYKJH_001728;end_range=658,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001728;partial=true;start_range=.,1 DBLQKK010000051.1 Protein Homology CDS 1 658 . - 0 ID=cds-HIH2189797.1;Parent=gene-ACYKJH_001728;Dbxref=NCBI_GP:HIH2189797.1;Name=HIH2189797.1;end_range=658,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344729.1;locus_tag=ACYKJH_001728;partial=true;product=6-hydroxymethylpterin diphosphokinase MptE-like protein;protein_id=HIH2189797.1;start_range=.,1;transl_table=11 ##sequence-region DBLQKK010000052.1 1 569 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000052.1 tpg region 1 569 . + . ID=DBLQKK010000052.1:1..569;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000052.1 tpg gene 1 569 . + . ID=gene-ACYKJH_001729;Name=ACYKJH_001729;end_range=569,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001729;partial=true;start_range=.,1 DBLQKK010000052.1 Protein Homology CDS 1 569 . + 0 ID=cds-HIH2189798.1;Parent=gene-ACYKJH_001729;Dbxref=NCBI_GP:HIH2189798.1;Name=HIH2189798.1;end_range=569,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344725.1;locus_tag=ACYKJH_001729;partial=true;product=6-hydroxymethylpterin diphosphokinase MptE-like protein;protein_id=HIH2189798.1;start_range=.,1;transl_table=11 ##sequence-region DBLQKK010000053.1 1 467 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000053.1 tpg region 1 467 . + . ID=DBLQKK010000053.1:1..467;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000053.1 tpg gene 1 467 . - . ID=gene-ACYKJH_001730;Name=ACYKJH_001730;end_range=467,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001730;partial=true;start_range=.,1 DBLQKK010000053.1 Protein Homology CDS 1 467 . - 0 ID=cds-HIH2189799.1;Parent=gene-ACYKJH_001730;Dbxref=NCBI_GP:HIH2189799.1;Name=HIH2189799.1;end_range=467,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011049956.1;locus_tag=ACYKJH_001730;partial=true;product=6-hydroxymethylpterin diphosphokinase MptE-like protein;protein_id=HIH2189799.1;start_range=.,1;transl_table=11 ##sequence-region DBLQKK010000054.1 1 334 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000054.1 tpg region 1 334 . + . ID=DBLQKK010000054.1:1..334;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000054.1 tpg gene 1 213 . - . ID=gene-ACYKJH_001731;Name=ACYKJH_001731;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001731;partial=true;start_range=.,1 DBLQKK010000054.1 Protein Homology CDS 1 213 . - 0 ID=cds-HIH2189800.1;Parent=gene-ACYKJH_001731;Dbxref=NCBI_GP:HIH2189800.1;Name=HIH2189800.1;Note=FlaA%3B structural flagella protein%3B in Helicobacter the flagella are composed of flagellin A and flagellin B%3B the amounts of each seem to be controlled by environmental conditions;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002853967.1;locus_tag=ACYKJH_001731;partial=true;product=flagellin;protein_id=HIH2189800.1;start_range=.,1;transl_table=11 ##sequence-region DBLQKK010000055.1 1 319 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000055.1 tpg region 1 319 . + . ID=DBLQKK010000055.1:1..319;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000055.1 tpg gene 1 319 . + . ID=gene-ACYKJH_001732;Name=ACYKJH_001732;end_range=319,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001732;partial=true;start_range=.,1 DBLQKK010000055.1 Protein Homology CDS 1 319 . + 2 ID=cds-HIH2189801.1;Parent=gene-ACYKJH_001732;Dbxref=NCBI_GP:HIH2189801.1;Name=HIH2189801.1;Note=FlaA%3B structural flagella protein%3B in Helicobacter the flagella are composed of flagellin A and flagellin B%3B the amounts of each seem to be controlled by environmental conditions;end_range=319,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344726.1;locus_tag=ACYKJH_001732;partial=true;product=flagellin;protein_id=HIH2189801.1;start_range=.,1;transl_table=11 ##sequence-region DBLQKK010000056.1 1 314 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000056.1 tpg region 1 314 . + . ID=DBLQKK010000056.1:1..314;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000056.1 tpg gene 1 314 . + . ID=gene-ACYKJH_001733;Name=ACYKJH_001733;end_range=314,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001733;partial=true;start_range=.,1 DBLQKK010000056.1 Protein Homology CDS 1 314 . + 0 ID=cds-HIH2189802.1;Parent=gene-ACYKJH_001733;Dbxref=NCBI_GP:HIH2189802.1;Name=HIH2189802.1;end_range=314,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344728.1;locus_tag=ACYKJH_001733;partial=true;product=motility associated factor glycosyltransferase family protein;protein_id=HIH2189802.1;start_range=.,1;transl_table=11 ##sequence-region DBLQKK010000057.1 1 89661 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000057.1 tpg region 1 89661 . + . ID=DBLQKK010000057.1:1..89661;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000057.1 tpg gene 10 747 . - . ID=gene-ACYKJH_001734;Name=ACYKJH_001734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001734 DBLQKK010000057.1 Protein Homology CDS 10 747 . - 0 ID=cds-HIH2189803.1;Parent=gene-ACYKJH_001734;Dbxref=NCBI_GP:HIH2189803.1;Name=HIH2189803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002867936.1;locus_tag=ACYKJH_001734;product=ATP-binding protein;protein_id=HIH2189803.1;transl_table=11 DBLQKK010000057.1 tpg gene 740 1966 . - . ID=gene-ACYKJH_001735;Name=ACYKJH_001735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001735 DBLQKK010000057.1 Protein Homology CDS 740 1966 . - 0 ID=cds-HIH2189804.1;Parent=gene-ACYKJH_001735;Dbxref=NCBI_GP:HIH2189804.1;Name=HIH2189804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343867.1;locus_tag=ACYKJH_001735;product=hypothetical protein;protein_id=HIH2189804.1;transl_table=11 DBLQKK010000057.1 tpg gene 2094 2678 . + . ID=gene-ACYKJH_001736;Name=ACYKJH_001736;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001736 DBLQKK010000057.1 Protein Homology CDS 2094 2678 . + 0 ID=cds-HIH2189805.1;Parent=gene-ACYKJH_001736;Dbxref=NCBI_GP:HIH2189805.1;Name=HIH2189805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343866.1;locus_tag=ACYKJH_001736;product=IMPACT family protein;protein_id=HIH2189805.1;transl_table=11 DBLQKK010000057.1 tpg gene 2722 3105 . - . ID=gene-ACYKJH_001737;Name=ACYKJH_001737;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001737 DBLQKK010000057.1 Protein Homology CDS 2722 3105 . - 0 ID=cds-HIH2189806.1;Parent=gene-ACYKJH_001737;Dbxref=NCBI_GP:HIH2189806.1;Name=HIH2189806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343865.1;locus_tag=ACYKJH_001737;product=hypothetical protein;protein_id=HIH2189806.1;transl_table=11 DBLQKK010000057.1 tpg gene 3182 3517 . - . ID=gene-ACYKJH_001738;Name=ACYKJH_001738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001738 DBLQKK010000057.1 Protein Homology CDS 3182 3517 . - 0 ID=cds-HIH2189807.1;Parent=gene-ACYKJH_001738;Dbxref=NCBI_GP:HIH2189807.1;Name=HIH2189807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343864.1;locus_tag=ACYKJH_001738;product=hypothetical protein;protein_id=HIH2189807.1;transl_table=11 DBLQKK010000057.1 tpg gene 3507 5084 . - . ID=gene-ACYKJH_001739;Name=ACYKJH_001739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001739 DBLQKK010000057.1 Protein Homology CDS 3507 5084 . - 0 ID=cds-HIH2189808.1;Parent=gene-ACYKJH_001739;Dbxref=NCBI_GP:HIH2189808.1;Name=HIH2189808.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343863.1;locus_tag=ACYKJH_001739;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=HIH2189808.1;transl_table=11 DBLQKK010000057.1 tpg gene 5214 5411 . - . ID=gene-ACYKJH_001740;Name=ACYKJH_001740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001740 DBLQKK010000057.1 GeneMarkS-2+ CDS 5214 5411 . - 0 ID=cds-HIH2189809.1;Parent=gene-ACYKJH_001740;Dbxref=NCBI_GP:HIH2189809.1;Name=HIH2189809.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_001740;product=hypothetical protein;protein_id=HIH2189809.1;transl_table=11 DBLQKK010000057.1 tpg gene 5426 5629 . - . ID=gene-ACYKJH_001741;Name=ACYKJH_001741;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001741 DBLQKK010000057.1 GeneMarkS-2+ CDS 5426 5629 . - 0 ID=cds-HIH2189810.1;Parent=gene-ACYKJH_001741;Dbxref=NCBI_GP:HIH2189810.1;Name=HIH2189810.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_001741;product=hypothetical protein;protein_id=HIH2189810.1;transl_table=11 DBLQKK010000057.1 tpg pseudogene 5642 6275 . - . ID=gene-ACYKJH_001742;Name=ACYKJH_001742;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001742;pseudo=true DBLQKK010000057.1 Protein Homology CDS 5642 6275 . - 0 ID=cds-ACYKJH_001742;Parent=gene-ACYKJH_001742;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343861.1;locus_tag=ACYKJH_001742;product=toxin-antitoxin system YwqK family antitoxin;pseudo=true;transl_table=11 DBLQKK010000057.1 tpg gene 6250 6510 . - . ID=gene-ACYKJH_001743;Name=ACYKJH_001743;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001743 DBLQKK010000057.1 Protein Homology CDS 6250 6510 . - 0 ID=cds-HIH2189811.1;Parent=gene-ACYKJH_001743;Dbxref=NCBI_GP:HIH2189811.1;Name=HIH2189811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002872777.1;locus_tag=ACYKJH_001743;product=superinfection immunity protein;protein_id=HIH2189811.1;transl_table=11 DBLQKK010000057.1 tpg gene 6679 6888 . + . ID=gene-ACYKJH_001744;Name=ACYKJH_001744;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001744 DBLQKK010000057.1 Protein Homology CDS 6679 6888 . + 0 ID=cds-HIH2189812.1;Parent=gene-ACYKJH_001744;Dbxref=NCBI_GP:HIH2189812.1;Name=HIH2189812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343859.1;locus_tag=ACYKJH_001744;product=transcriptional regulator;protein_id=HIH2189812.1;transl_table=11 DBLQKK010000057.1 tpg gene 6949 7905 . + . ID=gene-ACYKJH_001745;Name=ACYKJH_001745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001745 DBLQKK010000057.1 Protein Homology CDS 6949 7905 . + 0 ID=cds-HIH2189813.1;Parent=gene-ACYKJH_001745;Dbxref=NCBI_GP:HIH2189813.1;Name=HIH2189813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343858.1;locus_tag=ACYKJH_001745;product=hypothetical protein;protein_id=HIH2189813.1;transl_table=11 DBLQKK010000057.1 tpg gene 7910 8482 . - . ID=gene-ACYKJH_001746;Name=ACYKJH_001746;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001746 DBLQKK010000057.1 Protein Homology CDS 7910 8482 . - 0 ID=cds-HIH2189814.1;Parent=gene-ACYKJH_001746;Dbxref=NCBI_GP:HIH2189814.1;Name=HIH2189814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343857.1;locus_tag=ACYKJH_001746;product=YceI family protein;protein_id=HIH2189814.1;transl_table=11 DBLQKK010000057.1 tpg gene 8556 8918 . - . ID=gene-ACYKJH_001747;Name=ACYKJH_001747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001747 DBLQKK010000057.1 Protein Homology CDS 8556 8918 . - 0 ID=cds-HIH2189815.1;Parent=gene-ACYKJH_001747;Dbxref=NCBI_GP:HIH2189815.1;Name=HIH2189815.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343856.1;locus_tag=ACYKJH_001747;product=HIT family protein;protein_id=HIH2189815.1;transl_table=11 DBLQKK010000057.1 tpg gene 9026 9730 . + . ID=gene-ACYKJH_001748;Name=ACYKJH_001748;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001748 DBLQKK010000057.1 Protein Homology CDS 9026 9730 . + 0 ID=cds-HIH2189816.1;Parent=gene-ACYKJH_001748;Dbxref=NCBI_GP:HIH2189816.1;Name=HIH2189816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343855.1;locus_tag=ACYKJH_001748;product=putative metalloprotease CJM1_0395 family protein;protein_id=HIH2189816.1;transl_table=11 DBLQKK010000057.1 tpg pseudogene 9836 10051 . - . ID=gene-ACYKJH_001749;Name=ACYKJH_001749;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001749;pseudo=true DBLQKK010000057.1 Protein Homology CDS 9836 10051 . - 0 ID=cds-ACYKJH_001749;Parent=gene-ACYKJH_001749;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002867793.1;locus_tag=ACYKJH_001749;product=hypothetical protein;pseudo=true;transl_table=11 DBLQKK010000057.1 tpg gene 10357 10530 . - . ID=gene-ACYKJH_001750;Name=ACYKJH_001750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001750 DBLQKK010000057.1 GeneMarkS-2+ CDS 10357 10530 . - 0 ID=cds-HIH2189817.1;Parent=gene-ACYKJH_001750;Dbxref=NCBI_GP:HIH2189817.1;Name=HIH2189817.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_001750;product=hypothetical protein;protein_id=HIH2189817.1;transl_table=11 DBLQKK010000057.1 tpg gene 10736 12457 . - . ID=gene-ACYKJH_001751;Name=ACYKJH_001751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001751 DBLQKK010000057.1 Protein Homology CDS 10736 12457 . - 0 ID=cds-HIH2189818.1;Parent=gene-ACYKJH_001751;Dbxref=NCBI_GP:HIH2189818.1;Name=HIH2189818.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343852.1;locus_tag=ACYKJH_001751;product=GMC family oxidoreductase;protein_id=HIH2189818.1;transl_table=11 DBLQKK010000057.1 tpg gene 12459 13187 . - . ID=gene-ACYKJH_001752;Name=ACYKJH_001752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001752 DBLQKK010000057.1 Protein Homology CDS 12459 13187 . - 0 ID=cds-HIH2189819.1;Parent=gene-ACYKJH_001752;Dbxref=NCBI_GP:HIH2189819.1;Name=HIH2189819.1;Ontology_term=GO:0008873,GO:0008875;gbkey=CDS;go_function=gluconate 2-dehydrogenase activity|0008873||IEA,gluconate dehydrogenase activity|0008875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343851.1;locus_tag=ACYKJH_001752;product=gluconate 2-dehydrogenase subunit 3 family protein;protein_id=HIH2189819.1;transl_table=11 DBLQKK010000057.1 tpg gene 13323 14027 . - . ID=gene-ACYKJH_001753;Name=ACYKJH_001753;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001753 DBLQKK010000057.1 Protein Homology CDS 13323 14027 . - 0 ID=cds-HIH2189820.1;Parent=gene-ACYKJH_001753;Dbxref=NCBI_GP:HIH2189820.1;Name=HIH2189820.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343850.1;locus_tag=ACYKJH_001753;product=tetratricopeptide repeat protein;protein_id=HIH2189820.1;transl_table=11 DBLQKK010000057.1 tpg gene 14027 15856 . - . ID=gene-ACYKJH_001754;Name=ACYKJH_001754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001754 DBLQKK010000057.1 Protein Homology CDS 14027 15856 . - 0 ID=cds-HIH2189821.1;Parent=gene-ACYKJH_001754;Dbxref=NCBI_GP:HIH2189821.1;Name=HIH2189821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343849.1;locus_tag=ACYKJH_001754;product=dynamin family protein;protein_id=HIH2189821.1;transl_table=11 DBLQKK010000057.1 tpg gene 15846 18032 . - . ID=gene-ACYKJH_001755;Name=ACYKJH_001755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001755 DBLQKK010000057.1 Protein Homology CDS 15846 18032 . - 0 ID=cds-HIH2189822.1;Parent=gene-ACYKJH_001755;Dbxref=NCBI_GP:HIH2189822.1;Name=HIH2189822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343848.1;locus_tag=ACYKJH_001755;product=dynamin family protein;protein_id=HIH2189822.1;transl_table=11 DBLQKK010000057.1 tpg gene 18060 18785 . - . ID=gene-ACYKJH_001756;Name=ACYKJH_001756;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001756 DBLQKK010000057.1 Protein Homology CDS 18060 18785 . - 0 ID=cds-HIH2189823.1;Parent=gene-ACYKJH_001756;Dbxref=NCBI_GP:HIH2189823.1;Name=HIH2189823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343847.1;locus_tag=ACYKJH_001756;product=fumarate reductase iron-sulfur subunit;protein_id=HIH2189823.1;transl_table=11 DBLQKK010000057.1 tpg gene 18778 20769 . - . ID=gene-ACYKJH_001757;Name=ACYKJH_001757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001757 DBLQKK010000057.1 Protein Homology CDS 18778 20769 . - 0 ID=cds-HIH2189824.1;Parent=gene-ACYKJH_001757;Dbxref=NCBI_GP:HIH2189824.1;Name=HIH2189824.1;Ontology_term=GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343846.1;locus_tag=ACYKJH_001757;product=fumarate reductase flavoprotein subunit;protein_id=HIH2189824.1;transl_table=11 DBLQKK010000057.1 tpg gene 20753 21535 . - . ID=gene-ACYKJH_001758;Name=ACYKJH_001758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001758 DBLQKK010000057.1 Protein Homology CDS 20753 21535 . - 0 ID=cds-HIH2189825.1;Parent=gene-ACYKJH_001758;Dbxref=NCBI_GP:HIH2189825.1;Name=HIH2189825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343845.1;locus_tag=ACYKJH_001758;product=fumarate reductase cytochrome b subunit;protein_id=HIH2189825.1;transl_table=11 DBLQKK010000057.1 tpg gene 21604 22419 . - . ID=gene-ACYKJH_001759;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=ACYKJH_001759 DBLQKK010000057.1 Protein Homology CDS 21604 22419 . - 0 ID=cds-HIH2189826.1;Parent=gene-ACYKJH_001759;Dbxref=NCBI_GP:HIH2189826.1;Name=HIH2189826.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343844.1;locus_tag=ACYKJH_001759;product=prolipoprotein diacylglyceryl transferase;protein_id=HIH2189826.1;transl_table=11 DBLQKK010000057.1 tpg gene 22509 23408 . + . ID=gene-ACYKJH_001760;Name=ACYKJH_001760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001760 DBLQKK010000057.1 Protein Homology CDS 22509 23408 . + 0 ID=cds-HIH2189827.1;Parent=gene-ACYKJH_001760;Dbxref=NCBI_GP:HIH2189827.1;Name=HIH2189827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343843.1;locus_tag=ACYKJH_001760;product=membrane lipoprotein lipid attachment site-containing protein;protein_id=HIH2189827.1;transl_table=11 DBLQKK010000057.1 tpg gene 23482 24270 . - . ID=gene-ACYKJH_001761;Name=ACYKJH_001761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001761 DBLQKK010000057.1 Protein Homology CDS 23482 24270 . - 0 ID=cds-HIH2189828.1;Parent=gene-ACYKJH_001761;Dbxref=NCBI_GP:HIH2189828.1;Name=HIH2189828.1;Ontology_term=GO:0019632,GO:0004764,GO:0050661;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA,NADP binding|0050661||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343842.1;locus_tag=ACYKJH_001761;product=shikimate dehydrogenase;protein_id=HIH2189828.1;transl_table=11 DBLQKK010000057.1 tpg gene 24267 25103 . - . ID=gene-ACYKJH_001762;Name=ACYKJH_001762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001762 DBLQKK010000057.1 Protein Homology CDS 24267 25103 . - 0 ID=cds-HIH2189829.1;Parent=gene-ACYKJH_001762;Dbxref=NCBI_GP:HIH2189829.1;Name=HIH2189829.1;Ontology_term=GO:0042834,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343841.1;locus_tag=ACYKJH_001762;product=SPOR domain-containing protein;protein_id=HIH2189829.1;transl_table=11 DBLQKK010000057.1 tpg gene 25117 25662 . - . ID=gene-ACYKJH_001763;Name=ACYKJH_001763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001763 DBLQKK010000057.1 Protein Homology CDS 25117 25662 . - 0 ID=cds-HIH2189830.1;Parent=gene-ACYKJH_001763;Dbxref=NCBI_GP:HIH2189830.1;Name=HIH2189830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343840.1;locus_tag=ACYKJH_001763;product=DUF1882 domain-containing protein;protein_id=HIH2189830.1;transl_table=11 DBLQKK010000057.1 tpg gene 25659 26903 . - . ID=gene-ACYKJH_001764;Name=ACYKJH_001764;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001764 DBLQKK010000057.1 Protein Homology CDS 25659 26903 . - 0 ID=cds-HIH2189831.1;Parent=gene-ACYKJH_001764;Dbxref=NCBI_GP:HIH2189831.1;Name=HIH2189831.1;Ontology_term=GO:0019264,GO:0004372,GO:0030170;gbkey=CDS;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343839.1;locus_tag=ACYKJH_001764;product=serine hydroxymethyltransferase;protein_id=HIH2189831.1;transl_table=11 DBLQKK010000057.1 tpg gene 26900 28405 . - . ID=gene-ACYKJH_001765;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=ACYKJH_001765 DBLQKK010000057.1 Protein Homology CDS 26900 28405 . - 0 ID=cds-HIH2189832.1;Parent=gene-ACYKJH_001765;Dbxref=NCBI_GP:HIH2189832.1;Name=HIH2189832.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343838.1;locus_tag=ACYKJH_001765;product=lysine--tRNA ligase;protein_id=HIH2189832.1;transl_table=11 DBLQKK010000057.1 tpg gene 28406 28879 . - . ID=gene-ACYKJH_001766;Name=ACYKJH_001766;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001766 DBLQKK010000057.1 Protein Homology CDS 28406 28879 . - 0 ID=cds-HIH2189833.1;Parent=gene-ACYKJH_001766;Dbxref=NCBI_GP:HIH2189833.1;Name=HIH2189833.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343837.1;locus_tag=ACYKJH_001766;product=Fur family transcriptional regulator;protein_id=HIH2189833.1;transl_table=11 DBLQKK010000057.1 tpg gene 28881 29444 . - . ID=gene-ACYKJH_001767;Name=ACYKJH_001767;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001767 DBLQKK010000057.1 Protein Homology CDS 28881 29444 . - 0 ID=cds-HIH2189834.1;Parent=gene-ACYKJH_001767;Dbxref=NCBI_GP:HIH2189834.1;Name=HIH2189834.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343836.1;locus_tag=ACYKJH_001767;product=CvpA family protein;protein_id=HIH2189834.1;transl_table=11 DBLQKK010000057.1 tpg gene 29512 29796 . - . ID=gene-ACYKJH_001768;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=ACYKJH_001768 DBLQKK010000057.1 Protein Homology CDS 29512 29796 . - 0 ID=cds-HIH2189835.1;Parent=gene-ACYKJH_001768;Dbxref=NCBI_GP:HIH2189835.1;Name=HIH2189835.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343835.1;locus_tag=ACYKJH_001768;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=HIH2189835.1;transl_table=11 DBLQKK010000057.1 tpg gene 29940 30518 . + . ID=gene-ACYKJH_001769;Name=ACYKJH_001769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001769 DBLQKK010000057.1 Protein Homology CDS 29940 30518 . + 0 ID=cds-HIH2189836.1;Parent=gene-ACYKJH_001769;Dbxref=NCBI_GP:HIH2189836.1;Name=HIH2189836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343834.1;locus_tag=ACYKJH_001769;product=hypothetical protein;protein_id=HIH2189836.1;transl_table=11 DBLQKK010000057.1 tpg gene 30515 31513 . + . ID=gene-ACYKJH_001770;Name=ACYKJH_001770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001770 DBLQKK010000057.1 Protein Homology CDS 30515 31513 . + 0 ID=cds-HIH2189837.1;Parent=gene-ACYKJH_001770;Dbxref=NCBI_GP:HIH2189837.1;Name=HIH2189837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343833.1;locus_tag=ACYKJH_001770;product=hypothetical protein;protein_id=HIH2189837.1;transl_table=11 DBLQKK010000057.1 tpg gene 31510 31800 . + . ID=gene-ACYKJH_001771;Name=ACYKJH_001771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001771 DBLQKK010000057.1 Protein Homology CDS 31510 31800 . + 0 ID=cds-HIH2189838.1;Parent=gene-ACYKJH_001771;Dbxref=NCBI_GP:HIH2189838.1;Name=HIH2189838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343832.1;locus_tag=ACYKJH_001771;product=tram-like protein;protein_id=HIH2189838.1;transl_table=11 DBLQKK010000057.1 tpg gene 31787 32416 . + . ID=gene-ACYKJH_001772;Name=ACYKJH_001772;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001772 DBLQKK010000057.1 Protein Homology CDS 31787 32416 . + 0 ID=cds-HIH2189839.1;Parent=gene-ACYKJH_001772;Dbxref=NCBI_GP:HIH2189839.1;Name=HIH2189839.1;Ontology_term=GO:0004594;gbkey=CDS;go_function=pantothenate kinase activity|0004594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343831.1;locus_tag=ACYKJH_001772;product=type III pantothenate kinase;protein_id=HIH2189839.1;transl_table=11 DBLQKK010000057.1 tpg gene 32534 33880 . + . ID=gene-ACYKJH_001773;Name=ACYKJH_001773;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001773 DBLQKK010000057.1 Protein Homology CDS 32534 33880 . + 0 ID=cds-HIH2189840.1;Parent=gene-ACYKJH_001773;Dbxref=NCBI_GP:HIH2189840.1;Name=HIH2189840.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343830.1;locus_tag=ACYKJH_001773;product=FAD-dependent oxidoreductase;protein_id=HIH2189840.1;transl_table=11 DBLQKK010000057.1 tpg gene 33929 35371 . + . ID=gene-ACYKJH_001774;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=ACYKJH_001774 DBLQKK010000057.1 Protein Homology CDS 33929 35371 . + 0 ID=cds-HIH2189841.1;Parent=gene-ACYKJH_001774;Dbxref=NCBI_GP:HIH2189841.1;Name=HIH2189841.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343829.1;locus_tag=ACYKJH_001774;product=pyruvate kinase;protein_id=HIH2189841.1;transl_table=11 DBLQKK010000057.1 tpg gene 35469 36104 . + . ID=gene-ACYKJH_001775;Name=ACYKJH_001775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001775 DBLQKK010000057.1 Protein Homology CDS 35469 36104 . + 0 ID=cds-HIH2189842.1;Parent=gene-ACYKJH_001775;Dbxref=NCBI_GP:HIH2189842.1;Name=HIH2189842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343828.1;locus_tag=ACYKJH_001775;product=hypothetical protein;protein_id=HIH2189842.1;transl_table=11 DBLQKK010000057.1 tpg gene 36135 38597 . - . ID=gene-ACYKJH_001776;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=ACYKJH_001776 DBLQKK010000057.1 Protein Homology CDS 36135 38597 . - 0 ID=cds-HIH2189843.1;Parent=gene-ACYKJH_001776;Dbxref=NCBI_GP:HIH2189843.1;Name=HIH2189843.1;gbkey=CDS;gene=pflB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343827.1;locus_tag=ACYKJH_001776;product=motility protein PflB;protein_id=HIH2189843.1;transl_table=11 DBLQKK010000057.1 tpg gene 38607 39842 . - . ID=gene-ACYKJH_001777;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=ACYKJH_001777 DBLQKK010000057.1 Protein Homology CDS 38607 39842 . - 0 ID=cds-HIH2189844.1;Parent=gene-ACYKJH_001777;Dbxref=NCBI_GP:HIH2189844.1;Name=HIH2189844.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343826.1;locus_tag=ACYKJH_001777;product=serine--tRNA ligase;protein_id=HIH2189844.1;transl_table=11 DBLQKK010000057.1 tpg gene 39853 40812 . - . ID=gene-ACYKJH_001778;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=ACYKJH_001778 DBLQKK010000057.1 Protein Homology CDS 39853 40812 . - 0 ID=cds-HIH2189845.1;Parent=gene-ACYKJH_001778;Dbxref=NCBI_GP:HIH2189845.1;Name=HIH2189845.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343825.1;locus_tag=ACYKJH_001778;product=tryptophan--tRNA ligase;protein_id=HIH2189845.1;transl_table=11 DBLQKK010000057.1 tpg gene 40809 41306 . - . ID=gene-ACYKJH_001779;Name=ACYKJH_001779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001779 DBLQKK010000057.1 Protein Homology CDS 40809 41306 . - 0 ID=cds-HIH2189846.1;Parent=gene-ACYKJH_001779;Dbxref=NCBI_GP:HIH2189846.1;Name=HIH2189846.1;Ontology_term=GO:0008652,GO:0009073,GO:0000287,GO:0004765,GO:0005524;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,shikimate kinase activity|0004765||IEA,ATP binding|0005524||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343824.1;locus_tag=ACYKJH_001779;product=shikimate kinase;protein_id=HIH2189846.1;transl_table=11 DBLQKK010000057.1 tpg gene 41293 42675 . - . ID=gene-ACYKJH_001780;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=ACYKJH_001780 DBLQKK010000057.1 Protein Homology CDS 41293 42675 . - 0 ID=cds-HIH2189847.1;Parent=gene-ACYKJH_001780;Dbxref=NCBI_GP:HIH2189847.1;Name=HIH2189847.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343823.1;locus_tag=ACYKJH_001780;product=ribosome biogenesis GTPase Der;protein_id=HIH2189847.1;transl_table=11 DBLQKK010000057.1 tpg gene 42776 43708 . + . ID=gene-ACYKJH_001781;Name=ACYKJH_001781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001781 DBLQKK010000057.1 Protein Homology CDS 42776 43708 . + 0 ID=cds-HIH2189848.1;Parent=gene-ACYKJH_001781;Dbxref=NCBI_GP:HIH2189848.1;Name=HIH2189848.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343822.1;locus_tag=ACYKJH_001781;product=DMT family transporter;protein_id=HIH2189848.1;transl_table=11 DBLQKK010000057.1 tpg gene 43705 44520 . + . ID=gene-ACYKJH_001782;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=ACYKJH_001782 DBLQKK010000057.1 Protein Homology CDS 43705 44520 . + 0 ID=cds-HIH2189849.1;Parent=gene-ACYKJH_001782;Dbxref=NCBI_GP:HIH2189849.1;Name=HIH2189849.1;Ontology_term=GO:0009058,GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002862627.1;locus_tag=ACYKJH_001782;product=3-deoxy-8-phosphooctulonate synthase;protein_id=HIH2189849.1;transl_table=11 DBLQKK010000057.1 tpg gene 44517 44981 . + . ID=gene-ACYKJH_001783;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=ACYKJH_001783 DBLQKK010000057.1 Protein Homology CDS 44517 44981 . + 0 ID=cds-HIH2189850.1;Parent=gene-ACYKJH_001783;Dbxref=NCBI_GP:HIH2189850.1;Name=HIH2189850.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343820.1;locus_tag=ACYKJH_001783;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=HIH2189850.1;transl_table=11 DBLQKK010000057.1 tpg gene 44981 45379 . + . ID=gene-ACYKJH_001784;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=ACYKJH_001784 DBLQKK010000057.1 Protein Homology CDS 44981 45379 . + 0 ID=cds-HIH2189851.1;Parent=gene-ACYKJH_001784;Dbxref=NCBI_GP:HIH2189851.1;Name=HIH2189851.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343819.1;locus_tag=ACYKJH_001784;product=transcription antitermination factor NusB;protein_id=HIH2189851.1;transl_table=11 DBLQKK010000057.1 tpg gene 45376 46215 . + . ID=gene-ACYKJH_001785;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=ACYKJH_001785 DBLQKK010000057.1 Protein Homology CDS 45376 46215 . + 0 ID=cds-HIH2189852.1;Parent=gene-ACYKJH_001785;Dbxref=NCBI_GP:HIH2189852.1;Name=HIH2189852.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343818.1;locus_tag=ACYKJH_001785;product=orotidine-5'-phosphate decarboxylase;protein_id=HIH2189852.1;transl_table=11 DBLQKK010000057.1 tpg gene 46212 46997 . + . ID=gene-ACYKJH_001786;Name=ACYKJH_001786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001786 DBLQKK010000057.1 Protein Homology CDS 46212 46997 . + 0 ID=cds-HIH2189853.1;Parent=gene-ACYKJH_001786;Dbxref=NCBI_GP:HIH2189853.1;Name=HIH2189853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343817.1;locus_tag=ACYKJH_001786;product=hypothetical protein;protein_id=HIH2189853.1;transl_table=11 DBLQKK010000057.1 tpg gene 47053 47946 . + . ID=gene-ACYKJH_001787;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=ACYKJH_001787 DBLQKK010000057.1 Protein Homology CDS 47053 47946 . + 0 ID=cds-HIH2189854.1;Parent=gene-ACYKJH_001787;Dbxref=NCBI_GP:HIH2189854.1;Name=HIH2189854.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343816.1;locus_tag=ACYKJH_001787;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=HIH2189854.1;transl_table=11 DBLQKK010000057.1 tpg gene 47946 48518 . + . ID=gene-ACYKJH_001788;Name=ACYKJH_001788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001788 DBLQKK010000057.1 Protein Homology CDS 47946 48518 . + 0 ID=cds-HIH2189855.1;Parent=gene-ACYKJH_001788;Dbxref=NCBI_GP:HIH2189855.1;Name=HIH2189855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002857273.1;locus_tag=ACYKJH_001788;product=ferric reductase-like transmembrane domain-containing protein;protein_id=HIH2189855.1;transl_table=11 DBLQKK010000057.1 tpg gene 48483 50195 . - . ID=gene-ACYKJH_001789;Name=ACYKJH_001789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001789 DBLQKK010000057.1 Protein Homology CDS 48483 50195 . - 0 ID=cds-HIH2189856.1;Parent=gene-ACYKJH_001789;Dbxref=NCBI_GP:HIH2189856.1;Name=HIH2189856.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343814.1;locus_tag=ACYKJH_001789;product=AAA family ATPase;protein_id=HIH2189856.1;transl_table=11 DBLQKK010000057.1 tpg gene 50195 51019 . - . ID=gene-ACYKJH_001790;Name=ACYKJH_001790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001790 DBLQKK010000057.1 Protein Homology CDS 50195 51019 . - 0 ID=cds-HIH2189857.1;Parent=gene-ACYKJH_001790;Dbxref=NCBI_GP:HIH2189857.1;Name=HIH2189857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343813.1;locus_tag=ACYKJH_001790;product=hypothetical protein;protein_id=HIH2189857.1;transl_table=11 DBLQKK010000057.1 tpg gene 51030 51506 . - . ID=gene-ACYKJH_001791;Name=ACYKJH_001791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001791 DBLQKK010000057.1 Protein Homology CDS 51030 51506 . - 0 ID=cds-HIH2189858.1;Parent=gene-ACYKJH_001791;Dbxref=NCBI_GP:HIH2189858.1;Name=HIH2189858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343812.1;locus_tag=ACYKJH_001791;product=hypothetical protein;protein_id=HIH2189858.1;transl_table=11 DBLQKK010000057.1 tpg gene 51515 52006 . - . ID=gene-ACYKJH_001792;Name=ACYKJH_001792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001792 DBLQKK010000057.1 Protein Homology CDS 51515 52006 . - 0 ID=cds-HIH2189859.1;Parent=gene-ACYKJH_001792;Dbxref=NCBI_GP:HIH2189859.1;Name=HIH2189859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343811.1;locus_tag=ACYKJH_001792;product=YajQ family cyclic di-GMP-binding protein;protein_id=HIH2189859.1;transl_table=11 DBLQKK010000057.1 tpg gene 51996 52931 . - . ID=gene-ACYKJH_001793;Name=ACYKJH_001793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001793 DBLQKK010000057.1 Protein Homology CDS 51996 52931 . - 0 ID=cds-HIH2189860.1;Parent=gene-ACYKJH_001793;Dbxref=NCBI_GP:HIH2189860.1;Name=HIH2189860.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343810.1;locus_tag=ACYKJH_001793;product=D-2-hydroxyacid dehydrogenase;protein_id=HIH2189860.1;transl_table=11 DBLQKK010000057.1 tpg gene 52934 54103 . - . ID=gene-ACYKJH_001794;Name=ACYKJH_001794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001794 DBLQKK010000057.1 Protein Homology CDS 52934 54103 . - 0 ID=cds-HIH2189861.1;Parent=gene-ACYKJH_001794;Dbxref=NCBI_GP:HIH2189861.1;Name=HIH2189861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343809.1;locus_tag=ACYKJH_001794;product=glutathionylspermidine synthase family protein;protein_id=HIH2189861.1;transl_table=11 DBLQKK010000057.1 tpg gene 54113 54718 . - . ID=gene-ACYKJH_001795;Name=ACYKJH_001795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001795 DBLQKK010000057.1 Protein Homology CDS 54113 54718 . - 0 ID=cds-HIH2189862.1;Parent=gene-ACYKJH_001795;Dbxref=NCBI_GP:HIH2189862.1;Name=HIH2189862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343808.1;locus_tag=ACYKJH_001795;product=UPF0323 family lipoprotein;protein_id=HIH2189862.1;transl_table=11 DBLQKK010000057.1 tpg gene 54838 55050 . - . ID=gene-ACYKJH_001796;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=ACYKJH_001796 DBLQKK010000057.1 Protein Homology CDS 54838 55050 . - 0 ID=cds-HIH2189863.1;Parent=gene-ACYKJH_001796;Dbxref=NCBI_GP:HIH2189863.1;Name=HIH2189863.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343807.1;locus_tag=ACYKJH_001796;product=30S ribosomal protein S21;protein_id=HIH2189863.1;transl_table=11 DBLQKK010000057.1 tpg gene 55210 56586 . + . ID=gene-ACYKJH_001797;Name=ccoG;gbkey=Gene;gene=ccoG;gene_biotype=protein_coding;locus_tag=ACYKJH_001797 DBLQKK010000057.1 Protein Homology CDS 55210 56586 . + 0 ID=cds-HIH2189864.1;Parent=gene-ACYKJH_001797;Dbxref=NCBI_GP:HIH2189864.1;Name=HIH2189864.1;Ontology_term=GO:0008535,GO:0016020;gbkey=CDS;gene=ccoG;go_component=membrane|0016020||IEA;go_process=respiratory chain complex IV assembly|0008535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343806.1;locus_tag=ACYKJH_001797;product=cytochrome c oxidase accessory protein CcoG;protein_id=HIH2189864.1;transl_table=11 DBLQKK010000057.1 tpg gene 56573 57205 . + . ID=gene-ACYKJH_001798;Name=cmeR;gbkey=Gene;gene=cmeR;gene_biotype=protein_coding;locus_tag=ACYKJH_001798 DBLQKK010000057.1 Protein Homology CDS 56573 57205 . + 0 ID=cds-HIH2189865.1;Parent=gene-ACYKJH_001798;Dbxref=NCBI_GP:HIH2189865.1;Name=HIH2189865.1;gbkey=CDS;gene=cmeR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343805.1;locus_tag=ACYKJH_001798;product=multidrug efflux system transcriptional regulator CmeR;protein_id=HIH2189865.1;transl_table=11 DBLQKK010000057.1 tpg gene 57299 58402 . + . ID=gene-ACYKJH_001799;Name=cmeA;gbkey=Gene;gene=cmeA;gene_biotype=protein_coding;locus_tag=ACYKJH_001799 DBLQKK010000057.1 Protein Homology CDS 57299 58402 . + 0 ID=cds-HIH2189866.1;Parent=gene-ACYKJH_001799;Dbxref=NCBI_GP:HIH2189866.1;Name=HIH2189866.1;gbkey=CDS;gene=cmeA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343804.1;locus_tag=ACYKJH_001799;product=multidrug efflux RND transporter periplasmic adaptor subunit CmeA;protein_id=HIH2189866.1;transl_table=11 DBLQKK010000057.1 tpg gene 58402 61524 . + . ID=gene-ACYKJH_001800;Name=cmeB;gbkey=Gene;gene=cmeB;gene_biotype=protein_coding;locus_tag=ACYKJH_001800 DBLQKK010000057.1 Protein Homology CDS 58402 61524 . + 0 ID=cds-HIH2189867.1;Parent=gene-ACYKJH_001800;Dbxref=NCBI_GP:HIH2189867.1;Name=HIH2189867.1;gbkey=CDS;gene=cmeB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343803.1;locus_tag=ACYKJH_001800;product=multidrug efflux RND transporter permease subunit CmeB;protein_id=HIH2189867.1;transl_table=11 DBLQKK010000057.1 tpg pseudogene 61517 62994 . + . ID=gene-ACYKJH_001801;Name=cmeC;gbkey=Gene;gene=cmeC;gene_biotype=pseudogene;locus_tag=ACYKJH_001801;pseudo=true DBLQKK010000057.1 Protein Homology CDS 61517 62994 . + 0 ID=cds-ACYKJH_001801;Parent=gene-ACYKJH_001801;Note=frameshifted;gbkey=CDS;gene=cmeC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343802.1;locus_tag=ACYKJH_001801;product=multidrug efflux transporter outer membrane subunit CmeC;pseudo=true;transl_table=11 DBLQKK010000057.1 tpg gene 63017 63268 . - . ID=gene-ACYKJH_001802;Name=cmeU;gbkey=Gene;gene=cmeU;gene_biotype=protein_coding;locus_tag=ACYKJH_001802 DBLQKK010000057.1 Protein Homology CDS 63017 63268 . - 0 ID=cds-HIH2189868.1;Parent=gene-ACYKJH_001802;Dbxref=NCBI_GP:HIH2189868.1;Name=HIH2189868.1;gbkey=CDS;gene=cmeU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343801.1;locus_tag=ACYKJH_001802;product=CmeU family protein;protein_id=HIH2189868.1;transl_table=11 DBLQKK010000057.1 tpg gene 63395 64741 . + . ID=gene-ACYKJH_001803;Name=ACYKJH_001803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001803 DBLQKK010000057.1 Protein Homology CDS 63395 64741 . + 0 ID=cds-HIH2189869.1;Parent=gene-ACYKJH_001803;Dbxref=NCBI_GP:HIH2189869.1;Name=HIH2189869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343800.1;locus_tag=ACYKJH_001803;product=coproporphyrinogen III oxidase family protein;protein_id=HIH2189869.1;transl_table=11 DBLQKK010000057.1 tpg gene 64738 65190 . - . ID=gene-ACYKJH_001804;Name=hemJ;gbkey=Gene;gene=hemJ;gene_biotype=protein_coding;locus_tag=ACYKJH_001804 DBLQKK010000057.1 Protein Homology CDS 64738 65190 . - 0 ID=cds-HIH2189870.1;Parent=gene-ACYKJH_001804;Dbxref=NCBI_GP:HIH2189870.1;Name=HIH2189870.1;gbkey=CDS;gene=hemJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343799.1;locus_tag=ACYKJH_001804;product=protoporphyrinogen oxidase HemJ;protein_id=HIH2189870.1;transl_table=11 DBLQKK010000057.1 tpg gene 65174 65644 . - . ID=gene-ACYKJH_001805;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=ACYKJH_001805 DBLQKK010000057.1 Protein Homology CDS 65174 65644 . - 0 ID=cds-HIH2189871.1;Parent=gene-ACYKJH_001805;Dbxref=NCBI_GP:HIH2189871.1;Name=HIH2189871.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343798.1;locus_tag=ACYKJH_001805;product=signal peptidase II;protein_id=HIH2189871.1;transl_table=11 DBLQKK010000057.1 tpg gene 65637 66974 . - . ID=gene-ACYKJH_001806;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=ACYKJH_001806 DBLQKK010000057.1 Protein Homology CDS 65637 66974 . - 0 ID=cds-HIH2189872.1;Parent=gene-ACYKJH_001806;Dbxref=NCBI_GP:HIH2189872.1;Name=HIH2189872.1;Ontology_term=GO:0005975,GO:0009252,GO:0000287,GO:0008966;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA;go_process=carbohydrate metabolic process|0005975||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343797.1;locus_tag=ACYKJH_001806;product=phosphoglucosamine mutase;protein_id=HIH2189872.1;transl_table=11 DBLQKK010000057.1 tpg gene 67068 68093 . - . ID=gene-ACYKJH_001807;Name=ACYKJH_001807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001807 DBLQKK010000057.1 Protein Homology CDS 67068 68093 . - 0 ID=cds-HIH2189873.1;Parent=gene-ACYKJH_001807;Dbxref=NCBI_GP:HIH2189873.1;Name=HIH2189873.1;Ontology_term=GO:0004130,GO:0016491,GO:0020037;gbkey=CDS;go_function=cytochrome-c peroxidase activity|0004130||IEA,oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343796.1;locus_tag=ACYKJH_001807;product=cytochrome-c peroxidase;protein_id=HIH2189873.1;transl_table=11 DBLQKK010000057.1 tpg gene 68293 68901 . + . ID=gene-ACYKJH_001808;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=ACYKJH_001808 DBLQKK010000057.1 Protein Homology CDS 68293 68901 . + 0 ID=cds-HIH2189874.1;Parent=gene-ACYKJH_001808;Dbxref=NCBI_GP:HIH2189874.1;Name=HIH2189874.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343795.1;locus_tag=ACYKJH_001808;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=HIH2189874.1;transl_table=11 DBLQKK010000057.1 tpg gene 68886 69203 . + . ID=gene-ACYKJH_001809;Name=ACYKJH_001809;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001809 DBLQKK010000057.1 Protein Homology CDS 68886 69203 . + 0 ID=cds-HIH2189875.1;Parent=gene-ACYKJH_001809;Dbxref=NCBI_GP:HIH2189875.1;Name=HIH2189875.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343794.1;locus_tag=ACYKJH_001809;product=dihydroneopterin aldolase;protein_id=HIH2189875.1;transl_table=11 DBLQKK010000057.1 tpg gene 69282 69953 . + . ID=gene-ACYKJH_001810;Name=hsrA;gbkey=Gene;gene=hsrA;gene_biotype=protein_coding;locus_tag=ACYKJH_001810 DBLQKK010000057.1 Protein Homology CDS 69282 69953 . + 0 ID=cds-HIH2189876.1;Parent=gene-ACYKJH_001810;Dbxref=NCBI_GP:HIH2189876.1;Name=HIH2189876.1;gbkey=CDS;gene=hsrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343793.1;locus_tag=ACYKJH_001810;product=homeostatic response regulator transcription factor HsrA;protein_id=HIH2189876.1;transl_table=11 DBLQKK010000057.1 tpg gene 70066 70311 . + . ID=gene-ACYKJH_001811;Name=fdxB;gbkey=Gene;gene=fdxB;gene_biotype=protein_coding;locus_tag=ACYKJH_001811 DBLQKK010000057.1 Protein Homology CDS 70066 70311 . + 0 ID=cds-HIH2189877.1;Parent=gene-ACYKJH_001811;Dbxref=NCBI_GP:HIH2189877.1;Name=HIH2189877.1;gbkey=CDS;gene=fdxB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343792.1;locus_tag=ACYKJH_001811;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=HIH2189877.1;transl_table=11 DBLQKK010000057.1 tpg gene 70311 71771 . + . ID=gene-ACYKJH_001812;Name=ACYKJH_001812;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001812 DBLQKK010000057.1 Protein Homology CDS 70311 71771 . + 0 ID=cds-HIH2189878.1;Parent=gene-ACYKJH_001812;Dbxref=NCBI_GP:HIH2189878.1;Name=HIH2189878.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343791.1;locus_tag=ACYKJH_001812;product=Ppx/GppA phosphatase family protein;protein_id=HIH2189878.1;transl_table=11 DBLQKK010000057.1 tpg gene 71768 72565 . - . ID=gene-ACYKJH_001813;Name=ACYKJH_001813;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001813 DBLQKK010000057.1 Protein Homology CDS 71768 72565 . - 0 ID=cds-HIH2189879.1;Parent=gene-ACYKJH_001813;Dbxref=NCBI_GP:HIH2189879.1;Name=HIH2189879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343790.1;locus_tag=ACYKJH_001813;product=hypothetical protein;protein_id=HIH2189879.1;transl_table=11 DBLQKK010000057.1 tpg gene 72566 72874 . - . ID=gene-ACYKJH_001814;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=ACYKJH_001814 DBLQKK010000057.1 Protein Homology CDS 72566 72874 . - 0 ID=cds-HIH2189880.1;Parent=gene-ACYKJH_001814;Dbxref=NCBI_GP:HIH2189880.1;Name=HIH2189880.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009425;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum basal body|0009425||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343789.1;locus_tag=ACYKJH_001814;product=flagellar motor switch protein FliN;protein_id=HIH2189880.1;transl_table=11 DBLQKK010000057.1 tpg gene 72874 73296 . - . ID=gene-ACYKJH_001815;Name=ACYKJH_001815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001815 DBLQKK010000057.1 Protein Homology CDS 72874 73296 . - 0 ID=cds-HIH2189881.1;Parent=gene-ACYKJH_001815;Dbxref=NCBI_GP:HIH2189881.1;Name=HIH2189881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343788.1;locus_tag=ACYKJH_001815;product=chemotaxis protein CheX;protein_id=HIH2189881.1;transl_table=11 DBLQKK010000057.1 tpg gene 73367 74116 . - . ID=gene-ACYKJH_001816;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=ACYKJH_001816 DBLQKK010000057.1 Protein Homology CDS 73367 74116 . - 0 ID=cds-HIH2189882.1;Parent=gene-ACYKJH_001816;Dbxref=NCBI_GP:HIH2189882.1;Name=HIH2189882.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343787.1;locus_tag=ACYKJH_001816;product=tryptophan synthase subunit alpha;protein_id=HIH2189882.1;transl_table=11 DBLQKK010000057.1 tpg gene 74109 75287 . - . ID=gene-ACYKJH_001817;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=ACYKJH_001817 DBLQKK010000057.1 Protein Homology CDS 74109 75287 . - 0 ID=cds-HIH2189883.1;Parent=gene-ACYKJH_001817;Dbxref=NCBI_GP:HIH2189883.1;Name=HIH2189883.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343786.1;locus_tag=ACYKJH_001817;product=tryptophan synthase subunit beta;protein_id=HIH2189883.1;transl_table=11 DBLQKK010000057.1 tpg gene 75284 75883 . - . ID=gene-ACYKJH_001818;Name=trpF;gbkey=Gene;gene=trpF;gene_biotype=protein_coding;locus_tag=ACYKJH_001818 DBLQKK010000057.1 Protein Homology CDS 75284 75883 . - 0 ID=cds-HIH2189884.1;Parent=gene-ACYKJH_001818;Dbxref=NCBI_GP:HIH2189884.1;Name=HIH2189884.1;gbkey=CDS;gene=trpF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343785.1;locus_tag=ACYKJH_001818;product=phosphoribosylanthranilate isomerase;protein_id=HIH2189884.1;transl_table=11 DBLQKK010000057.1 tpg gene 75870 77471 . - . ID=gene-ACYKJH_001819;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=ACYKJH_001819 DBLQKK010000057.1 Protein Homology CDS 75870 77471 . - 0 ID=cds-HIH2189885.1;Parent=gene-ACYKJH_001819;Dbxref=NCBI_GP:HIH2189885.1;Name=HIH2189885.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343784.1;locus_tag=ACYKJH_001819;product=anthranilate phosphoribosyltransferase;protein_id=HIH2189885.1;transl_table=11 DBLQKK010000057.1 tpg gene 77468 78718 . - . ID=gene-ACYKJH_001820;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=ACYKJH_001820 DBLQKK010000057.1 Protein Homology CDS 77468 78718 . - 0 ID=cds-HIH2189886.1;Parent=gene-ACYKJH_001820;Dbxref=NCBI_GP:HIH2189886.1;Name=HIH2189886.1;Ontology_term=GO:0009058,GO:0046872;gbkey=CDS;gene=trpE;go_function=metal ion binding|0046872||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343783.1;locus_tag=ACYKJH_001820;product=anthranilate synthase component I family protein;protein_id=HIH2189886.1;transl_table=11 DBLQKK010000057.1 tpg gene 78883 79008 . - . ID=gene-ACYKJH_001821;Name=ACYKJH_001821;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001821 DBLQKK010000057.1 Protein Homology CDS 78883 79008 . - 0 ID=cds-HIH2189887.1;Parent=gene-ACYKJH_001821;Dbxref=NCBI_GP:HIH2189887.1;Name=HIH2189887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343782.1;locus_tag=ACYKJH_001821;product=hypothetical protein;protein_id=HIH2189887.1;transl_table=11 DBLQKK010000057.1 tpg gene 79131 79916 . + . ID=gene-ACYKJH_001822;Name=ACYKJH_001822;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001822 DBLQKK010000057.1 Protein Homology CDS 79131 79916 . + 0 ID=cds-HIH2189888.1;Parent=gene-ACYKJH_001822;Dbxref=NCBI_GP:HIH2189888.1;Name=HIH2189888.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343781.1;locus_tag=ACYKJH_001822;product=sulfite exporter TauE/SafE family protein;protein_id=HIH2189888.1;transl_table=11 DBLQKK010000057.1 tpg gene 79989 82814 . + . ID=gene-ACYKJH_001823;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=ACYKJH_001823 DBLQKK010000057.1 Protein Homology CDS 79989 82814 . + 0 ID=cds-HIH2189889.1;Parent=gene-ACYKJH_001823;Dbxref=NCBI_GP:HIH2189889.1;Name=HIH2189889.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343780.1;locus_tag=ACYKJH_001823;product=excinuclease ABC subunit UvrA;protein_id=HIH2189889.1;transl_table=11 DBLQKK010000057.1 tpg gene 82819 83262 . + . ID=gene-ACYKJH_001824;Name=ACYKJH_001824;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001824 DBLQKK010000057.1 Protein Homology CDS 82819 83262 . + 0 ID=cds-HIH2189890.1;Parent=gene-ACYKJH_001824;Dbxref=NCBI_GP:HIH2189890.1;Name=HIH2189890.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343779.1;locus_tag=ACYKJH_001824;product=YqaA family protein;protein_id=HIH2189890.1;transl_table=11 DBLQKK010000057.1 tpg gene 83218 84225 . - . ID=gene-ACYKJH_001825;Name=ACYKJH_001825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001825 DBLQKK010000057.1 Protein Homology CDS 83218 84225 . - 0 ID=cds-HIH2189891.1;Parent=gene-ACYKJH_001825;Dbxref=NCBI_GP:HIH2189891.1;Name=HIH2189891.1;Ontology_term=GO:0016799;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343778.1;locus_tag=ACYKJH_001825;product=nucleoside hydrolase;protein_id=HIH2189891.1;transl_table=11 DBLQKK010000057.1 tpg pseudogene 84222 85566 . - . ID=gene-ACYKJH_001826;Name=ACYKJH_001826;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001826;pseudo=true DBLQKK010000057.1 Protein Homology CDS 84222 85566 . - 0 ID=cds-ACYKJH_001826;Parent=gene-ACYKJH_001826;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343777.1;locus_tag=ACYKJH_001826;product=MFS transporter;pseudo=true;transl_table=11 DBLQKK010000057.1 tpg gene 85730 88369 . + . ID=gene-ACYKJH_001827;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=ACYKJH_001827 DBLQKK010000057.1 Protein Homology CDS 85730 88369 . + 0 ID=cds-HIH2189892.1;Parent=gene-ACYKJH_001827;Dbxref=NCBI_GP:HIH2189892.1;Name=HIH2189892.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343776.1;locus_tag=ACYKJH_001827;product=DNA polymerase I;protein_id=HIH2189892.1;transl_table=11 DBLQKK010000057.1 tpg gene 88385 89161 . + . ID=gene-ACYKJH_001828;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=ACYKJH_001828 DBLQKK010000057.1 Protein Homology CDS 88385 89161 . + 0 ID=cds-HIH2189893.1;Parent=gene-ACYKJH_001828;Dbxref=NCBI_GP:HIH2189893.1;Name=HIH2189893.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343775.1;locus_tag=ACYKJH_001828;product=flagellar motor stator protein MotA;protein_id=HIH2189893.1;transl_table=11 DBLQKK010000057.1 tpg gene 89164 89661 . + . ID=gene-ACYKJH_001829;Name=motB;end_range=89661,.;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=ACYKJH_001829;partial=true DBLQKK010000057.1 Protein Homology CDS 89164 89661 . + 0 ID=cds-HIH2189894.1;Parent=gene-ACYKJH_001829;Dbxref=NCBI_GP:HIH2189894.1;Name=HIH2189894.1;end_range=89661,.;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343774.1;locus_tag=ACYKJH_001829;partial=true;product=flagellar motor protein MotB;protein_id=HIH2189894.1;transl_table=11 ##sequence-region DBLQKK010000058.1 1 55991 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000058.1 tpg region 1 55991 . + . ID=DBLQKK010000058.1:1..55991;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000058.1 tpg gene 1 569 . - . ID=gene-ACYKJH_001830;Name=ACYKJH_001830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001830;partial=true;start_range=.,1 DBLQKK010000058.1 Protein Homology CDS 1 569 . - 0 ID=cds-HIH2189895.1;Parent=gene-ACYKJH_001830;Dbxref=NCBI_GP:HIH2189895.1;Name=HIH2189895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002822030.1;locus_tag=ACYKJH_001830;partial=true;product=DUF2920 family protein;protein_id=HIH2189895.1;start_range=.,1;transl_table=11 DBLQKK010000058.1 tpg gene 569 1084 . - . ID=gene-ACYKJH_001831;Name=ACYKJH_001831;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001831 DBLQKK010000058.1 Protein Homology CDS 569 1084 . - 0 ID=cds-HIH2189896.1;Parent=gene-ACYKJH_001831;Dbxref=NCBI_GP:HIH2189896.1;Name=HIH2189896.1;Ontology_term=GO:0015628,GO:0005886,GO:0015627;gbkey=CDS;go_component=plasma membrane|0005886||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344731.1;locus_tag=ACYKJH_001831;product=type II secretion system protein;protein_id=HIH2189896.1;transl_table=11 DBLQKK010000058.1 tpg gene 1085 2092 . - . ID=gene-ACYKJH_001832;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=ACYKJH_001832 DBLQKK010000058.1 Protein Homology CDS 1085 2092 . - 0 ID=cds-HIH2189897.1;Parent=gene-ACYKJH_001832;Dbxref=NCBI_GP:HIH2189897.1;Name=HIH2189897.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344732.1;locus_tag=ACYKJH_001832;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=HIH2189897.1;transl_table=11 DBLQKK010000058.1 tpg gene 2089 3483 . - . ID=gene-ACYKJH_001833;Name=ACYKJH_001833;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001833 DBLQKK010000058.1 Protein Homology CDS 2089 3483 . - 0 ID=cds-HIH2189898.1;Parent=gene-ACYKJH_001833;Dbxref=NCBI_GP:HIH2189898.1;Name=HIH2189898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344733.1;locus_tag=ACYKJH_001833;product=M99 family carboxypeptidase catalytic domain-containing protein;protein_id=HIH2189898.1;transl_table=11 DBLQKK010000058.1 tpg gene 3485 4555 . - . ID=gene-ACYKJH_001834;Name=dxr;gbkey=Gene;gene=dxr;gene_biotype=protein_coding;locus_tag=ACYKJH_001834 DBLQKK010000058.1 Protein Homology CDS 3485 4555 . - 0 ID=cds-HIH2189899.1;Parent=gene-ACYKJH_001834;Dbxref=NCBI_GP:HIH2189899.1;Name=HIH2189899.1;Ontology_term=GO:0008299,GO:0019288,GO:0030604,GO:0046872,GO:0005737;gbkey=CDS;gene=dxr;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344734.1;locus_tag=ACYKJH_001834;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=HIH2189899.1;transl_table=11 DBLQKK010000058.1 tpg gene 4552 5277 . - . ID=gene-ACYKJH_001835;Name=ACYKJH_001835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001835 DBLQKK010000058.1 Protein Homology CDS 4552 5277 . - 0 ID=cds-HIH2189900.1;Parent=gene-ACYKJH_001835;Dbxref=NCBI_GP:HIH2189900.1;Name=HIH2189900.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344735.1;locus_tag=ACYKJH_001835;product=phosphatidate cytidylyltransferase;protein_id=HIH2189900.1;transl_table=11 DBLQKK010000058.1 tpg gene 5286 5624 . - . ID=gene-ACYKJH_001836;Name=ACYKJH_001836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001836 DBLQKK010000058.1 Protein Homology CDS 5286 5624 . - 0 ID=cds-HIH2189901.1;Parent=gene-ACYKJH_001836;Dbxref=NCBI_GP:HIH2189901.1;Name=HIH2189901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344736.1;locus_tag=ACYKJH_001836;product=hypothetical protein;protein_id=HIH2189901.1;transl_table=11 DBLQKK010000058.1 tpg gene 5626 6933 . - . ID=gene-ACYKJH_001837;Name=ACYKJH_001837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001837 DBLQKK010000058.1 Protein Homology CDS 5626 6933 . - 0 ID=cds-HIH2189902.1;Parent=gene-ACYKJH_001837;Dbxref=NCBI_GP:HIH2189902.1;Name=HIH2189902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344737.1;locus_tag=ACYKJH_001837;product=NFACT RNA binding domain-containing protein;protein_id=HIH2189902.1;transl_table=11 DBLQKK010000058.1 tpg gene 6995 7570 . + . ID=gene-ACYKJH_001838;Name=ACYKJH_001838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001838 DBLQKK010000058.1 Protein Homology CDS 6995 7570 . + 0 ID=cds-HIH2189903.1;Parent=gene-ACYKJH_001838;Dbxref=NCBI_GP:HIH2189903.1;Name=HIH2189903.1;Ontology_term=GO:0005525,GO:0061603;gbkey=CDS;go_function=GTP binding|0005525||IEA,molybdenum cofactor guanylyltransferase activity|0061603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344738.1;locus_tag=ACYKJH_001838;product=molybdenum cofactor guanylyltransferase;protein_id=HIH2189903.1;transl_table=11 DBLQKK010000058.1 tpg gene 7567 8556 . + . ID=gene-ACYKJH_001839;Name=ACYKJH_001839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001839 DBLQKK010000058.1 Protein Homology CDS 7567 8556 . + 0 ID=cds-HIH2189904.1;Parent=gene-ACYKJH_001839;Dbxref=NCBI_GP:HIH2189904.1;Name=HIH2189904.1;Ontology_term=GO:0006629,GO:0004620,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344739.1;locus_tag=ACYKJH_001839;product=phospholipase A;protein_id=HIH2189904.1;transl_table=11 DBLQKK010000058.1 tpg gene 8642 9610 . + . ID=gene-ACYKJH_001840;Name=ceuB;gbkey=Gene;gene=ceuB;gene_biotype=protein_coding;locus_tag=ACYKJH_001840 DBLQKK010000058.1 Protein Homology CDS 8642 9610 . + 0 ID=cds-HIH2189905.1;Parent=gene-ACYKJH_001840;Dbxref=NCBI_GP:HIH2189905.1;Name=HIH2189905.1;gbkey=CDS;gene=ceuB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344740.1;locus_tag=ACYKJH_001840;product=enterochelin ABC transporter permease CeuB;protein_id=HIH2189905.1;transl_table=11 DBLQKK010000058.1 tpg gene 9603 10541 . + . ID=gene-ACYKJH_001841;Name=ceuC;gbkey=Gene;gene=ceuC;gene_biotype=protein_coding;locus_tag=ACYKJH_001841 DBLQKK010000058.1 Protein Homology CDS 9603 10541 . + 0 ID=cds-HIH2189906.1;Parent=gene-ACYKJH_001841;Dbxref=NCBI_GP:HIH2189906.1;Name=HIH2189906.1;gbkey=CDS;gene=ceuC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344741.1;locus_tag=ACYKJH_001841;product=enterochelin ABC transporter permease CeuC;protein_id=HIH2189906.1;transl_table=11 DBLQKK010000058.1 tpg gene 10538 11293 . + . ID=gene-ACYKJH_001842;Name=ceuD;gbkey=Gene;gene=ceuD;gene_biotype=protein_coding;locus_tag=ACYKJH_001842 DBLQKK010000058.1 Protein Homology CDS 10538 11293 . + 0 ID=cds-HIH2189907.1;Parent=gene-ACYKJH_001842;Dbxref=NCBI_GP:HIH2189907.1;Name=HIH2189907.1;gbkey=CDS;gene=ceuD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344742.1;locus_tag=ACYKJH_001842;product=enterochelin ABC transporter ATP-binding protein CeuD;protein_id=HIH2189907.1;transl_table=11 DBLQKK010000058.1 tpg gene 11306 12298 . + . ID=gene-ACYKJH_001843;Name=ceuE;gbkey=Gene;gene=ceuE;gene_biotype=protein_coding;locus_tag=ACYKJH_001843 DBLQKK010000058.1 Protein Homology CDS 11306 12298 . + 0 ID=cds-HIH2189908.1;Parent=gene-ACYKJH_001843;Dbxref=NCBI_GP:HIH2189908.1;Name=HIH2189908.1;gbkey=CDS;gene=ceuE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344743.1;locus_tag=ACYKJH_001843;product=enterochelin ABC transporter substrate-binding protein CeuE;protein_id=HIH2189908.1;transl_table=11 DBLQKK010000058.1 tpg gene 12371 12460 . - . ID=gene-ACYKJH_001844;Name=ACYKJH_001844;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKJH_001844 DBLQKK010000058.1 tRNAscan-SE tRNA 12371 12460 . - . ID=rna-ACYKJH_001844;Parent=gene-ACYKJH_001844;anticodon=(pos:complement(12424..12426));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_001844;product=tRNA-Ser DBLQKK010000058.1 tRNAscan-SE exon 12371 12460 . - . ID=exon-ACYKJH_001844-1;Parent=rna-ACYKJH_001844;anticodon=(pos:complement(12424..12426));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKJH_001844;product=tRNA-Ser DBLQKK010000058.1 tpg gene 12524 13078 . - . ID=gene-ACYKJH_001845;Name=ACYKJH_001845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001845 DBLQKK010000058.1 Protein Homology CDS 12524 13078 . - 0 ID=cds-HIH2189909.1;Parent=gene-ACYKJH_001845;Dbxref=NCBI_GP:HIH2189909.1;Name=HIH2189909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344744.1;locus_tag=ACYKJH_001845;product=hypothetical protein;protein_id=HIH2189909.1;transl_table=11 DBLQKK010000058.1 tpg gene 13214 15046 . - . ID=gene-ACYKJH_001846;Name=ACYKJH_001846;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001846 DBLQKK010000058.1 Protein Homology CDS 13214 15046 . - 0 ID=cds-HIH2189910.1;Parent=gene-ACYKJH_001846;Dbxref=NCBI_GP:HIH2189910.1;Name=HIH2189910.1;Ontology_term=GO:0008152,GO:0042279,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_function=nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344745.1;locus_tag=ACYKJH_001846;product=ammonia-forming cytochrome c nitrite reductase subunit c552;protein_id=HIH2189910.1;transl_table=11 DBLQKK010000058.1 tpg gene 15061 15576 . - . ID=gene-ACYKJH_001847;Name=nrfH;gbkey=Gene;gene=nrfH;gene_biotype=protein_coding;locus_tag=ACYKJH_001847 DBLQKK010000058.1 Protein Homology CDS 15061 15576 . - 0 ID=cds-HIH2189911.1;Parent=gene-ACYKJH_001847;Dbxref=NCBI_GP:HIH2189911.1;Name=HIH2189911.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=nrfH;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344746.1;locus_tag=ACYKJH_001847;product=cytochrome c nitrite reductase small subunit;protein_id=HIH2189911.1;transl_table=11 DBLQKK010000058.1 tpg gene 15764 17848 . + . ID=gene-ACYKJH_001848;Name=ACYKJH_001848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001848 DBLQKK010000058.1 Protein Homology CDS 15764 17848 . + 0 ID=cds-HIH2189912.1;Parent=gene-ACYKJH_001848;Dbxref=NCBI_GP:HIH2189912.1;Name=HIH2189912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344747.1;locus_tag=ACYKJH_001848;product=RNA degradosome polyphosphate kinase;protein_id=HIH2189912.1;transl_table=11 DBLQKK010000058.1 tpg gene 18167 18406 . - . ID=gene-ACYKJH_001849;Name=ACYKJH_001849;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001849 DBLQKK010000058.1 GeneMarkS-2+ CDS 18167 18406 . - 0 ID=cds-HIH2189913.1;Parent=gene-ACYKJH_001849;Dbxref=NCBI_GP:HIH2189913.1;Name=HIH2189913.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_001849;product=hypothetical protein;protein_id=HIH2189913.1;transl_table=11 DBLQKK010000058.1 tpg gene 18384 18938 . - . ID=gene-ACYKJH_001850;Name=ACYKJH_001850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001850 DBLQKK010000058.1 Protein Homology CDS 18384 18938 . - 0 ID=cds-HIH2189914.1;Parent=gene-ACYKJH_001850;Dbxref=NCBI_GP:HIH2189914.1;Name=HIH2189914.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:TIGR01414.1;locus_tag=ACYKJH_001850;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=HIH2189914.1;transl_table=11 DBLQKK010000058.1 tpg gene 19128 19829 . - . ID=gene-ACYKJH_001851;Name=ACYKJH_001851;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001851 DBLQKK010000058.1 Protein Homology CDS 19128 19829 . - 0 ID=cds-HIH2189915.1;Parent=gene-ACYKJH_001851;Dbxref=NCBI_GP:HIH2189915.1;Name=HIH2189915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002902430.1;locus_tag=ACYKJH_001851;product=toxin;protein_id=HIH2189915.1;transl_table=11 DBLQKK010000058.1 tpg gene 19798 20265 . - . ID=gene-ACYKJH_001852;Name=ACYKJH_001852;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001852 DBLQKK010000058.1 Protein Homology CDS 19798 20265 . - 0 ID=cds-HIH2189916.1;Parent=gene-ACYKJH_001852;Dbxref=NCBI_GP:HIH2189916.1;Name=HIH2189916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002860417.1;locus_tag=ACYKJH_001852;product=C4-dicarboxylate ABC transporter;protein_id=HIH2189916.1;transl_table=11 DBLQKK010000058.1 tpg gene 20466 20824 . - . ID=gene-ACYKJH_001853;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=ACYKJH_001853 DBLQKK010000058.1 cmsearch tmRNA 20466 20824 . - . ID=rna-ACYKJH_001853;Parent=gene-ACYKJH_001853;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKJH_001853;product=transfer-messenger RNA DBLQKK010000058.1 cmsearch exon 20466 20824 . - . ID=exon-ACYKJH_001853-1;Parent=rna-ACYKJH_001853;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKJH_001853;product=transfer-messenger RNA DBLQKK010000058.1 tpg gene 20825 21235 . - . ID=gene-ACYKJH_001854;Name=ACYKJH_001854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001854 DBLQKK010000058.1 Protein Homology CDS 20825 21235 . - 0 ID=cds-HIH2189917.1;Parent=gene-ACYKJH_001854;Dbxref=NCBI_GP:HIH2189917.1;Name=HIH2189917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002820028.1;locus_tag=ACYKJH_001854;product=histidine phosphotransferase;protein_id=HIH2189917.1;transl_table=11 DBLQKK010000058.1 tpg gene 21326 22333 . + . ID=gene-ACYKJH_001855;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=ACYKJH_001855 DBLQKK010000058.1 Protein Homology CDS 21326 22333 . + 0 ID=cds-HIH2189918.1;Parent=gene-ACYKJH_001855;Dbxref=NCBI_GP:HIH2189918.1;Name=HIH2189918.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344750.1;locus_tag=ACYKJH_001855;product=Holliday junction branch migration DNA helicase RuvB;protein_id=HIH2189918.1;transl_table=11 DBLQKK010000058.1 tpg gene 22337 23380 . + . ID=gene-ACYKJH_001856;Name=ACYKJH_001856;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001856 DBLQKK010000058.1 Protein Homology CDS 22337 23380 . + 0 ID=cds-HIH2189919.1;Parent=gene-ACYKJH_001856;Dbxref=NCBI_GP:HIH2189919.1;Name=HIH2189919.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344751.1;locus_tag=ACYKJH_001856;product=AI-2E family transporter;protein_id=HIH2189919.1;transl_table=11 DBLQKK010000058.1 tpg gene 23410 24801 . - . ID=gene-ACYKJH_001857;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=ACYKJH_001857 DBLQKK010000058.1 Protein Homology CDS 23410 24801 . - 0 ID=cds-HIH2189920.1;Parent=gene-ACYKJH_001857;Dbxref=NCBI_GP:HIH2189920.1;Name=HIH2189920.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344752.1;locus_tag=ACYKJH_001857;product=class II fumarate hydratase;protein_id=HIH2189920.1;transl_table=11 DBLQKK010000058.1 tpg gene 24857 27982 . - . ID=gene-ACYKJH_001858;Name=ACYKJH_001858;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001858 DBLQKK010000058.1 Protein Homology CDS 24857 27982 . - 0 ID=cds-HIH2189921.1;Parent=gene-ACYKJH_001858;Dbxref=NCBI_GP:HIH2189921.1;Name=HIH2189921.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344753.1;locus_tag=ACYKJH_001858;product=S8 family serine peptidase;protein_id=HIH2189921.1;transl_table=11 DBLQKK010000058.1 tpg gene 27985 29781 . - . ID=gene-ACYKJH_001859;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=ACYKJH_001859 DBLQKK010000058.1 Protein Homology CDS 27985 29781 . - 0 ID=cds-HIH2189922.1;Parent=gene-ACYKJH_001859;Dbxref=NCBI_GP:HIH2189922.1;Name=HIH2189922.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344754.1;locus_tag=ACYKJH_001859;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=HIH2189922.1;transl_table=11 DBLQKK010000058.1 tpg gene 29786 32134 . - . ID=gene-ACYKJH_001860;Name=ACYKJH_001860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001860 DBLQKK010000058.1 Protein Homology CDS 29786 32134 . - 0 ID=cds-HIH2189923.1;Parent=gene-ACYKJH_001860;Dbxref=NCBI_GP:HIH2189923.1;Name=HIH2189923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344755.1;locus_tag=ACYKJH_001860;product=nucleotidyltransferase;protein_id=HIH2189923.1;transl_table=11 DBLQKK010000058.1 tpg gene 32278 33342 . + . ID=gene-ACYKJH_001861;Name=mqnE;gbkey=Gene;gene=mqnE;gene_biotype=protein_coding;locus_tag=ACYKJH_001861 DBLQKK010000058.1 Protein Homology CDS 32278 33342 . + 0 ID=cds-HIH2189924.1;Parent=gene-ACYKJH_001861;Dbxref=NCBI_GP:HIH2189924.1;Name=HIH2189924.1;Ontology_term=GO:0009234,GO:0016765,GO:0051536;gbkey=CDS;gene=mqnE;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344756.1;locus_tag=ACYKJH_001861;product=aminofutalosine synthase MqnE;protein_id=HIH2189924.1;transl_table=11 DBLQKK010000058.1 tpg gene 33352 34671 . + . ID=gene-ACYKJH_001862;Name=ACYKJH_001862;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001862 DBLQKK010000058.1 Protein Homology CDS 33352 34671 . + 0 ID=cds-HIH2189925.1;Parent=gene-ACYKJH_001862;Dbxref=NCBI_GP:HIH2189925.1;Name=HIH2189925.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344757.1;locus_tag=ACYKJH_001862;product=NCS2 family permease;protein_id=HIH2189925.1;transl_table=11 DBLQKK010000058.1 tpg gene 34685 35128 . + . ID=gene-ACYKJH_001863;Name=ACYKJH_001863;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001863 DBLQKK010000058.1 Protein Homology CDS 34685 35128 . + 0 ID=cds-HIH2189926.1;Parent=gene-ACYKJH_001863;Dbxref=NCBI_GP:HIH2189926.1;Name=HIH2189926.1;Ontology_term=GO:0006144,GO:0106130;gbkey=CDS;go_function=purine phosphoribosyltransferase activity|0106130||IEA;go_process=purine nucleobase metabolic process|0006144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344758.1;locus_tag=ACYKJH_001863;product=phosphoribosyltransferase;protein_id=HIH2189926.1;transl_table=11 DBLQKK010000058.1 tpg gene 35173 35871 . + . ID=gene-ACYKJH_001864;Name=ACYKJH_001864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001864 DBLQKK010000058.1 Protein Homology CDS 35173 35871 . + 0 ID=cds-HIH2189927.1;Parent=gene-ACYKJH_001864;Dbxref=NCBI_GP:HIH2189927.1;Name=HIH2189927.1;Ontology_term=GO:0120010,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=intermembrane phospholipid transfer|0120010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344759.1;locus_tag=ACYKJH_001864;product=MlaA family lipoprotein;protein_id=HIH2189927.1;transl_table=11 DBLQKK010000058.1 tpg gene 35881 36450 . + . ID=gene-ACYKJH_001865;Name=ACYKJH_001865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001865 DBLQKK010000058.1 Protein Homology CDS 35881 36450 . + 0 ID=cds-HIH2189928.1;Parent=gene-ACYKJH_001865;Dbxref=NCBI_GP:HIH2189928.1;Name=HIH2189928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344760.1;locus_tag=ACYKJH_001865;product=ABC transporter substrate-binding protein;protein_id=HIH2189928.1;transl_table=11 DBLQKK010000058.1 tpg gene 36450 38915 . + . ID=gene-ACYKJH_001866;Name=ACYKJH_001866;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001866 DBLQKK010000058.1 Protein Homology CDS 36450 38915 . + 0 ID=cds-HIH2189929.1;Parent=gene-ACYKJH_001866;Dbxref=NCBI_GP:HIH2189929.1;Name=HIH2189929.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344761.1;locus_tag=ACYKJH_001866;product=efflux RND transporter permease subunit;protein_id=HIH2189929.1;transl_table=11 DBLQKK010000058.1 tpg gene 38946 39548 . - . ID=gene-ACYKJH_001867;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=ACYKJH_001867 DBLQKK010000058.1 Protein Homology CDS 38946 39548 . - 0 ID=cds-HIH2189930.1;Parent=gene-ACYKJH_001867;Dbxref=NCBI_GP:HIH2189930.1;Name=HIH2189930.1;Ontology_term=GO:0006281,GO:0035870,GO:0036222;gbkey=CDS;gene=rdgB;go_function=dITP diphosphatase activity|0035870||IEA,XTP diphosphatase activity|0036222||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344762.1;locus_tag=ACYKJH_001867;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=HIH2189930.1;transl_table=11 DBLQKK010000058.1 tpg gene 39715 41016 . + . ID=gene-ACYKJH_001868;Name=ACYKJH_001868;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001868 DBLQKK010000058.1 Protein Homology CDS 39715 41016 . + 0 ID=cds-HIH2189931.1;Parent=gene-ACYKJH_001868;Dbxref=NCBI_GP:HIH2189931.1;Name=HIH2189931.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002870629.1;locus_tag=ACYKJH_001868;product=MFS transporter;protein_id=HIH2189931.1;transl_table=11 DBLQKK010000058.1 tpg gene 41013 42686 . - . ID=gene-ACYKJH_001869;Name=ACYKJH_001869;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001869 DBLQKK010000058.1 Protein Homology CDS 41013 42686 . - 0 ID=cds-HIH2189932.1;Parent=gene-ACYKJH_001869;Dbxref=NCBI_GP:HIH2189932.1;Name=HIH2189932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002902449.1;locus_tag=ACYKJH_001869;product=ATP-binding protein;protein_id=HIH2189932.1;transl_table=11 DBLQKK010000058.1 tpg gene 42764 44086 . + . ID=gene-ACYKJH_001870;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=ACYKJH_001870 DBLQKK010000058.1 Protein Homology CDS 42764 44086 . + 0 ID=cds-HIH2189933.1;Parent=gene-ACYKJH_001870;Dbxref=NCBI_GP:HIH2189933.1;Name=HIH2189933.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344766.1;locus_tag=ACYKJH_001870;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=HIH2189933.1;transl_table=11 DBLQKK010000058.1 tpg gene 44083 45888 . + . ID=gene-ACYKJH_001871;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=ACYKJH_001871 DBLQKK010000058.1 Protein Homology CDS 44083 45888 . + 0 ID=cds-HIH2189934.1;Parent=gene-ACYKJH_001871;Dbxref=NCBI_GP:HIH2189934.1;Name=HIH2189934.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344767.1;locus_tag=ACYKJH_001871;product=selenocysteine-specific translation elongation factor;protein_id=HIH2189934.1;transl_table=11 DBLQKK010000058.1 tpg gene 45937 46647 . + . ID=gene-ACYKJH_001872;Name=ACYKJH_001872;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001872 DBLQKK010000058.1 Protein Homology CDS 45937 46647 . + 0 ID=cds-HIH2189935.1;Parent=gene-ACYKJH_001872;Dbxref=NCBI_GP:HIH2189935.1;Name=HIH2189935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344768.1;locus_tag=ACYKJH_001872;product=thioredoxin fold domain-containing protein;protein_id=HIH2189935.1;transl_table=11 DBLQKK010000058.1 tpg gene 46653 47183 . + . ID=gene-ACYKJH_001873;Name=ACYKJH_001873;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001873 DBLQKK010000058.1 Protein Homology CDS 46653 47183 . + 0 ID=cds-HIH2189936.1;Parent=gene-ACYKJH_001873;Dbxref=NCBI_GP:HIH2189936.1;Name=HIH2189936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344769.1;locus_tag=ACYKJH_001873;product=hypothetical protein;protein_id=HIH2189936.1;transl_table=11 DBLQKK010000058.1 tpg gene 47228 47719 . - . ID=gene-ACYKJH_001874;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=ACYKJH_001874 DBLQKK010000058.1 Protein Homology CDS 47228 47719 . - 0 ID=cds-HIH2189937.1;Parent=gene-ACYKJH_001874;Dbxref=NCBI_GP:HIH2189937.1;Name=HIH2189937.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344770.1;locus_tag=ACYKJH_001874;product=flavodoxin FldA;protein_id=HIH2189937.1;transl_table=11 DBLQKK010000058.1 tpg gene 47719 48414 . - . ID=gene-ACYKJH_001875;Name=ACYKJH_001875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001875 DBLQKK010000058.1 Protein Homology CDS 47719 48414 . - 0 ID=cds-HIH2189938.1;Parent=gene-ACYKJH_001875;Dbxref=NCBI_GP:HIH2189938.1;Name=HIH2189938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344771.1;locus_tag=ACYKJH_001875;product=hypothetical protein;protein_id=HIH2189938.1;transl_table=11 DBLQKK010000058.1 tpg gene 48417 48731 . - . ID=gene-ACYKJH_001876;Name=ACYKJH_001876;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001876 DBLQKK010000058.1 Protein Homology CDS 48417 48731 . - 0 ID=cds-HIH2189939.1;Parent=gene-ACYKJH_001876;Dbxref=NCBI_GP:HIH2189939.1;Name=HIH2189939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344772.1;locus_tag=ACYKJH_001876;product=DUF2325 domain-containing protein;protein_id=HIH2189939.1;transl_table=11 DBLQKK010000058.1 tpg gene 48903 50327 . + . ID=gene-ACYKJH_001877;Name=ACYKJH_001877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001877 DBLQKK010000058.1 Protein Homology CDS 48903 50327 . + 0 ID=cds-HIH2189940.1;Parent=gene-ACYKJH_001877;Dbxref=NCBI_GP:HIH2189940.1;Name=HIH2189940.1;Ontology_term=GO:0004096,GO:0020037,GO:0046872;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344773.1;locus_tag=ACYKJH_001877;product=catalase;protein_id=HIH2189940.1;transl_table=11 DBLQKK010000058.1 tpg gene 50384 50854 . + . ID=gene-ACYKJH_001878;Name=ACYKJH_001878;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001878 DBLQKK010000058.1 Protein Homology CDS 50384 50854 . + 0 ID=cds-HIH2189941.1;Parent=gene-ACYKJH_001878;Dbxref=NCBI_GP:HIH2189941.1;Name=HIH2189941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344774.1;locus_tag=ACYKJH_001878;product=Cj1386 family hemin-binding protein;protein_id=HIH2189941.1;transl_table=11 DBLQKK010000058.1 tpg gene 50855 51511 . - . ID=gene-ACYKJH_001879;Name=ACYKJH_001879;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001879 DBLQKK010000058.1 Protein Homology CDS 50855 51511 . - 0 ID=cds-HIH2189942.1;Parent=gene-ACYKJH_001879;Dbxref=NCBI_GP:HIH2189942.1;Name=HIH2189942.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344775.1;locus_tag=ACYKJH_001879;product=helix-turn-helix transcriptional regulator;protein_id=HIH2189942.1;transl_table=11 DBLQKK010000058.1 tpg gene 51679 52041 . + . ID=gene-ACYKJH_001880;Name=ACYKJH_001880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001880 DBLQKK010000058.1 Protein Homology CDS 51679 52041 . + 0 ID=cds-HIH2189943.1;Parent=gene-ACYKJH_001880;Dbxref=NCBI_GP:HIH2189943.1;Name=HIH2189943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344776.1;locus_tag=ACYKJH_001880;product=RidA family protein;protein_id=HIH2189943.1;transl_table=11 DBLQKK010000058.1 tpg pseudogene 52045 52437 . + . ID=gene-ACYKJH_001881;Name=ACYKJH_001881;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001881;pseudo=true DBLQKK010000058.1 Protein Homology CDS 52045 52437 . + 0 ID=cds-ACYKJH_001881;Parent=gene-ACYKJH_001881;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020247107.1;locus_tag=ACYKJH_001881;product=C4-dicarboxylate transporter DcuC;pseudo=true;transl_table=11 DBLQKK010000058.1 tpg gene 52509 52883 . + . ID=gene-ACYKJH_001882;Name=ACYKJH_001882;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001882 DBLQKK010000058.1 Protein Homology CDS 52509 52883 . + 0 ID=cds-HIH2189944.1;Parent=gene-ACYKJH_001882;Dbxref=NCBI_GP:HIH2189944.1;Name=HIH2189944.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025561.6;locus_tag=ACYKJH_001882;product=TnpV protein;protein_id=HIH2189944.1;transl_table=11 DBLQKK010000058.1 tpg gene 53250 55169 . + . ID=gene-ACYKJH_001883;Name=tet(O);gbkey=Gene;gene=tet(O);gene_biotype=protein_coding;locus_tag=ACYKJH_001883 DBLQKK010000058.1 Protein Homology CDS 53250 55169 . + 0 ID=cds-HIH2189945.1;Parent=gene-ACYKJH_001883;Dbxref=NCBI_GP:HIH2189945.1;Name=HIH2189945.1;gbkey=CDS;gene=tet(O);inference=COORDINATES: similar to AA sequence:RefSeq:WP_032490535.1;locus_tag=ACYKJH_001883;product=tetracycline resistance ribosomal protection protein Tet(O);protein_id=HIH2189945.1;transl_table=11 DBLQKK010000058.1 tpg gene 55224 55394 . + . ID=gene-ACYKJH_001884;Name=ACYKJH_001884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001884 DBLQKK010000058.1 Protein Homology CDS 55224 55394 . + 0 ID=cds-HIH2189946.1;Parent=gene-ACYKJH_001884;Dbxref=NCBI_GP:HIH2189946.1;Name=HIH2189946.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025568.6;locus_tag=ACYKJH_001884;product=cysteine-rich KTR domain-containing protein;protein_id=HIH2189946.1;transl_table=11 ##sequence-region DBLQKK010000059.1 1 49294 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKK010000059.1 tpg region 1 49294 . + . ID=DBLQKK010000059.1:1..49294;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22W1103;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKK010000059.1 tpg gene 1 178 . - . ID=gene-ACYKJH_001885;Name=ACYKJH_001885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001885;partial=true;start_range=.,1 DBLQKK010000059.1 Protein Homology CDS 1 178 . - 0 ID=cds-HIH2189947.1;Parent=gene-ACYKJH_001885;Dbxref=NCBI_GP:HIH2189947.1;Name=HIH2189947.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343722.1;locus_tag=ACYKJH_001885;partial=true;product=transaldolase family protein;protein_id=HIH2189947.1;start_range=.,1;transl_table=11 DBLQKK010000059.1 tpg gene 178 801 . - . ID=gene-ACYKJH_001886;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=ACYKJH_001886 DBLQKK010000059.1 Protein Homology CDS 178 801 . - 0 ID=cds-HIH2189948.1;Parent=gene-ACYKJH_001886;Dbxref=NCBI_GP:HIH2189948.1;Name=HIH2189948.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343723.1;locus_tag=ACYKJH_001886;product=phosphoserine phosphatase SerB;protein_id=HIH2189948.1;transl_table=11 DBLQKK010000059.1 tpg gene 801 1322 . - . ID=gene-ACYKJH_001887;Name=ACYKJH_001887;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001887 DBLQKK010000059.1 Protein Homology CDS 801 1322 . - 0 ID=cds-HIH2189949.1;Parent=gene-ACYKJH_001887;Dbxref=NCBI_GP:HIH2189949.1;Name=HIH2189949.1;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343724.1;locus_tag=ACYKJH_001887;product=chemotaxis protein CheW;protein_id=HIH2189949.1;transl_table=11 DBLQKK010000059.1 tpg gene 1327 3636 . - . ID=gene-ACYKJH_001888;Name=ACYKJH_001888;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001888 DBLQKK010000059.1 Protein Homology CDS 1327 3636 . - 0 ID=cds-HIH2189950.1;Parent=gene-ACYKJH_001888;Dbxref=NCBI_GP:HIH2189950.1;Name=HIH2189950.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343725.1;locus_tag=ACYKJH_001888;product=hybrid sensor histidine kinase/response regulator;protein_id=HIH2189950.1;transl_table=11 DBLQKK010000059.1 tpg gene 3640 4596 . - . ID=gene-ACYKJH_001889;Name=ACYKJH_001889;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001889 DBLQKK010000059.1 Protein Homology CDS 3640 4596 . - 0 ID=cds-HIH2189951.1;Parent=gene-ACYKJH_001889;Dbxref=NCBI_GP:HIH2189951.1;Name=HIH2189951.1;Ontology_term=GO:0000160,GO:0006935,GO:0000156;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343726.1;locus_tag=ACYKJH_001889;product=chemotaxis protein;protein_id=HIH2189951.1;transl_table=11 DBLQKK010000059.1 tpg gene 4589 5347 . - . ID=gene-ACYKJH_001890;Name=ACYKJH_001890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001890 DBLQKK010000059.1 Protein Homology CDS 4589 5347 . - 0 ID=cds-HIH2189952.1;Parent=gene-ACYKJH_001890;Dbxref=NCBI_GP:HIH2189952.1;Name=HIH2189952.1;Ontology_term=GO:0009245,GO:0008758,GO:0046872;gbkey=CDS;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,metal ion binding|0046872||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012662069.1;locus_tag=ACYKJH_001890;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=HIH2189952.1;transl_table=11 DBLQKK010000059.1 tpg gene 5357 5842 . - . ID=gene-ACYKJH_001891;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=ACYKJH_001891 DBLQKK010000059.1 Protein Homology CDS 5357 5842 . - 0 ID=cds-HIH2189953.1;Parent=gene-ACYKJH_001891;Dbxref=NCBI_GP:HIH2189953.1;Name=HIH2189953.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343728.1;locus_tag=ACYKJH_001891;product=transcription elongation factor GreA;protein_id=HIH2189953.1;transl_table=11 DBLQKK010000059.1 tpg gene 5854 6948 . - . ID=gene-ACYKJH_001892;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=ACYKJH_001892 DBLQKK010000059.1 Protein Homology CDS 5854 6948 . - 0 ID=cds-HIH2189954.1;Parent=gene-ACYKJH_001892;Dbxref=NCBI_GP:HIH2189954.1;Name=HIH2189954.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343729.1;locus_tag=ACYKJH_001892;product=lipid-A-disaccharide synthase;protein_id=HIH2189954.1;transl_table=11 DBLQKK010000059.1 tpg gene 7071 8225 . - . ID=gene-ACYKJH_001893;Name=ACYKJH_001893;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001893 DBLQKK010000059.1 Protein Homology CDS 7071 8225 . - 0 ID=cds-HIH2189955.1;Parent=gene-ACYKJH_001893;Dbxref=NCBI_GP:HIH2189955.1;Name=HIH2189955.1;Ontology_term=GO:0004674,GO:0005524;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012298.6;locus_tag=ACYKJH_001893;product=serine/threonine-protein kinase;protein_id=HIH2189955.1;transl_table=11 DBLQKK010000059.1 tpg pseudogene 8227 10067 . - . ID=gene-ACYKJH_001894;Name=ACYKJH_001894;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001894;pseudo=true DBLQKK010000059.1 Protein Homology CDS 8227 10067 . - 0 ID=cds-ACYKJH_001894;Parent=gene-ACYKJH_001894;Note=frameshifted;Ontology_term=GO:0006306,GO:0009307,GO:0003677,GO:0008168,GO:0008170,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,methyltransferase activity|0008168||IEA,N-methyltransferase activity|0008170||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=obsolete DNA methylation|0006306||IEA,DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004308388.1;locus_tag=ACYKJH_001894;product=site-specific DNA-methyltransferase;pseudo=true;transl_table=11 DBLQKK010000059.1 tpg pseudogene 10060 12923 . - . ID=gene-ACYKJH_001895;Name=ACYKJH_001895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKJH_001895;pseudo=true DBLQKK010000059.1 Protein Homology CDS 10060 12923 . - 0 ID=cds-ACYKJH_001895;Parent=gene-ACYKJH_001895;Note=frameshifted;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002904025.1;locus_tag=ACYKJH_001895;product=DEAD/DEAH box helicase family protein;pseudo=true;transl_table=11 DBLQKK010000059.1 tpg gene 13022 13774 . - . ID=gene-ACYKJH_001896;Name=peb3;gbkey=Gene;gene=peb3;gene_biotype=protein_coding;locus_tag=ACYKJH_001896 DBLQKK010000059.1 Protein Homology CDS 13022 13774 . - 0 ID=cds-HIH2189956.1;Parent=gene-ACYKJH_001896;Dbxref=NCBI_GP:HIH2189956.1;Name=HIH2189956.1;gbkey=CDS;gene=peb3;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343730.1;locus_tag=ACYKJH_001896;product=AcfC family glycoprotein adhesin PEB3;protein_id=HIH2189956.1;transl_table=11 DBLQKK010000059.1 tpg gene 14038 14997 . - . ID=gene-ACYKJH_001897;Name=ACYKJH_001897;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001897 DBLQKK010000059.1 Protein Homology CDS 14038 14997 . - 0 ID=cds-HIH2189957.1;Parent=gene-ACYKJH_001897;Dbxref=NCBI_GP:HIH2189957.1;Name=HIH2189957.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.6;locus_tag=ACYKJH_001897;product=MFS transporter;protein_id=HIH2189957.1;transl_table=11 DBLQKK010000059.1 tpg gene 14988 15209 . - . ID=gene-ACYKJH_001898;Name=ACYKJH_001898;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001898 DBLQKK010000059.1 GeneMarkS-2+ CDS 14988 15209 . - 0 ID=cds-HIH2189958.1;Parent=gene-ACYKJH_001898;Dbxref=NCBI_GP:HIH2189958.1;Name=HIH2189958.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_001898;product=MFS transporter;protein_id=HIH2189958.1;transl_table=11 DBLQKK010000059.1 tpg gene 15464 16240 . + . ID=gene-ACYKJH_001899;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=ACYKJH_001899 DBLQKK010000059.1 Protein Homology CDS 15464 16240 . + 0 ID=cds-HIH2189959.1;Parent=gene-ACYKJH_001899;Dbxref=NCBI_GP:HIH2189959.1;Name=HIH2189959.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343731.1;locus_tag=ACYKJH_001899;product=5'/3'-nucleotidase SurE;protein_id=HIH2189959.1;transl_table=11 DBLQKK010000059.1 tpg gene 16230 16889 . + . ID=gene-ACYKJH_001900;Name=ACYKJH_001900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001900 DBLQKK010000059.1 Protein Homology CDS 16230 16889 . + 0 ID=cds-HIH2189960.1;Parent=gene-ACYKJH_001900;Dbxref=NCBI_GP:HIH2189960.1;Name=HIH2189960.1;Ontology_term=GO:0005524,GO:0008641,GO:0061503;gbkey=CDS;go_function=ATP binding|0005524||IEA,ubiquitin-like modifier activating enzyme activity|0008641||IEA,tRNA threonylcarbamoyladenosine dehydratase|0061503||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343732.1;locus_tag=ACYKJH_001900;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=HIH2189960.1;transl_table=11 DBLQKK010000059.1 tpg gene 16873 17007 . + . ID=gene-ACYKJH_001901;Name=ACYKJH_001901;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001901 DBLQKK010000059.1 GeneMarkS-2+ CDS 16873 17007 . + 0 ID=cds-HIH2189961.1;Parent=gene-ACYKJH_001901;Dbxref=NCBI_GP:HIH2189961.1;Name=HIH2189961.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_001901;product=hypothetical protein;protein_id=HIH2189961.1;transl_table=11 DBLQKK010000059.1 tpg gene 17155 17283 . + . ID=gene-ACYKJH_001902;Name=ACYKJH_001902;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001902 DBLQKK010000059.1 GeneMarkS-2+ CDS 17155 17283 . + 0 ID=cds-HIH2189962.1;Parent=gene-ACYKJH_001902;Dbxref=NCBI_GP:HIH2189962.1;Name=HIH2189962.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKJH_001902;product=hypothetical protein;protein_id=HIH2189962.1;transl_table=11 DBLQKK010000059.1 tpg gene 17319 18065 . + . ID=gene-ACYKJH_001903;Name=ACYKJH_001903;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001903 DBLQKK010000059.1 Protein Homology CDS 17319 18065 . + 0 ID=cds-HIH2189963.1;Parent=gene-ACYKJH_001903;Dbxref=NCBI_GP:HIH2189963.1;Name=HIH2189963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002872405.1;locus_tag=ACYKJH_001903;product=OXA-184 family class D beta-lactamase OXA-184;protein_id=HIH2189963.1;transl_table=11 DBLQKK010000059.1 tpg gene 18171 18995 . + . ID=gene-ACYKJH_001904;Name=ACYKJH_001904;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001904 DBLQKK010000059.1 Protein Homology CDS 18171 18995 . + 0 ID=cds-HIH2189964.1;Parent=gene-ACYKJH_001904;Dbxref=NCBI_GP:HIH2189964.1;Name=HIH2189964.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002792006.1;locus_tag=ACYKJH_001904;product=CPBP family intramembrane glutamic endopeptidase;protein_id=HIH2189964.1;transl_table=11 DBLQKK010000059.1 tpg gene 19008 19880 . - . ID=gene-ACYKJH_001905;Name=ACYKJH_001905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001905 DBLQKK010000059.1 Protein Homology CDS 19008 19880 . - 0 ID=cds-HIH2189965.1;Parent=gene-ACYKJH_001905;Dbxref=NCBI_GP:HIH2189965.1;Name=HIH2189965.1;Ontology_term=GO:0005524,GO:0015419,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002876877.1;locus_tag=ACYKJH_001905;product=sulfate/molybdate ABC transporter ATP-binding protein;protein_id=HIH2189965.1;transl_table=11 DBLQKK010000059.1 tpg gene 19877 20551 . - . ID=gene-ACYKJH_001906;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=ACYKJH_001906 DBLQKK010000059.1 Protein Homology CDS 19877 20551 . - 0 ID=cds-HIH2189966.1;Parent=gene-ACYKJH_001906;Dbxref=NCBI_GP:HIH2189966.1;Name=HIH2189966.1;Ontology_term=GO:0015689,GO:0015412,GO:0005886,GO:0055052;gbkey=CDS;gene=modB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343739.1;locus_tag=ACYKJH_001906;product=molybdate ABC transporter permease subunit;protein_id=HIH2189966.1;transl_table=11 DBLQKK010000059.1 tpg gene 20544 20945 . - . ID=gene-ACYKJH_001907;Name=ACYKJH_001907;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001907 DBLQKK010000059.1 Protein Homology CDS 20544 20945 . - 0 ID=cds-HIH2189967.1;Parent=gene-ACYKJH_001907;Dbxref=NCBI_GP:HIH2189967.1;Name=HIH2189967.1;Ontology_term=GO:0015689;gbkey=CDS;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343740.1;locus_tag=ACYKJH_001907;product=TOBE domain-containing protein;protein_id=HIH2189967.1;transl_table=11 DBLQKK010000059.1 tpg gene 20942 21691 . - . ID=gene-ACYKJH_001908;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=ACYKJH_001908 DBLQKK010000059.1 Protein Homology CDS 20942 21691 . - 0 ID=cds-HIH2189968.1;Parent=gene-ACYKJH_001908;Dbxref=NCBI_GP:HIH2189968.1;Name=HIH2189968.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343741.1;locus_tag=ACYKJH_001908;product=molybdate ABC transporter substrate-binding protein;protein_id=HIH2189968.1;transl_table=11 DBLQKK010000059.1 tpg gene 21742 22428 . - . ID=gene-ACYKJH_001909;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=ACYKJH_001909 DBLQKK010000059.1 Protein Homology CDS 21742 22428 . - 0 ID=cds-HIH2189969.1;Parent=gene-ACYKJH_001909;Dbxref=NCBI_GP:HIH2189969.1;Name=HIH2189969.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343742.1;locus_tag=ACYKJH_001909;product=malonyl-ACP O-methyltransferase BioC;protein_id=HIH2189969.1;transl_table=11 DBLQKK010000059.1 tpg gene 22425 23036 . - . ID=gene-ACYKJH_001910;Name=ACYKJH_001910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001910 DBLQKK010000059.1 Protein Homology CDS 22425 23036 . - 0 ID=cds-HIH2189970.1;Parent=gene-ACYKJH_001910;Dbxref=NCBI_GP:HIH2189970.1;Name=HIH2189970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343743.1;locus_tag=ACYKJH_001910;product=pimeloyl-ACP methyl esterase BioG family protein;protein_id=HIH2189970.1;transl_table=11 DBLQKK010000059.1 tpg gene 23033 24175 . - . ID=gene-ACYKJH_001911;Name=ACYKJH_001911;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001911 DBLQKK010000059.1 Protein Homology CDS 23033 24175 . - 0 ID=cds-HIH2189971.1;Parent=gene-ACYKJH_001911;Dbxref=NCBI_GP:HIH2189971.1;Name=HIH2189971.1;Ontology_term=GO:0016747,GO:0030170;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343744.1;locus_tag=ACYKJH_001911;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=HIH2189971.1;transl_table=11 DBLQKK010000059.1 tpg gene 24243 25526 . + . ID=gene-ACYKJH_001912;Name=ACYKJH_001912;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001912 DBLQKK010000059.1 Protein Homology CDS 24243 25526 . + 0 ID=cds-HIH2189972.1;Parent=gene-ACYKJH_001912;Dbxref=NCBI_GP:HIH2189972.1;Name=HIH2189972.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343745.1;locus_tag=ACYKJH_001912;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=HIH2189972.1;transl_table=11 DBLQKK010000059.1 tpg gene 25513 26118 . - . ID=gene-ACYKJH_001913;Name=ACYKJH_001913;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001913 DBLQKK010000059.1 Protein Homology CDS 25513 26118 . - 0 ID=cds-HIH2189973.1;Parent=gene-ACYKJH_001913;Dbxref=NCBI_GP:HIH2189973.1;Name=HIH2189973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343746.1;locus_tag=ACYKJH_001913;product=dethiobiotin synthase;protein_id=HIH2189973.1;transl_table=11 DBLQKK010000059.1 tpg gene 26128 26442 . - . ID=gene-ACYKJH_001914;Name=ACYKJH_001914;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001914 DBLQKK010000059.1 Protein Homology CDS 26128 26442 . - 0 ID=cds-HIH2189974.1;Parent=gene-ACYKJH_001914;Dbxref=NCBI_GP:HIH2189974.1;Name=HIH2189974.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343747.1;locus_tag=ACYKJH_001914;product=DMT family transporter;protein_id=HIH2189974.1;transl_table=11 DBLQKK010000059.1 tpg gene 26445 26783 . - . ID=gene-ACYKJH_001915;Name=ACYKJH_001915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001915 DBLQKK010000059.1 Protein Homology CDS 26445 26783 . - 0 ID=cds-HIH2189975.1;Parent=gene-ACYKJH_001915;Dbxref=NCBI_GP:HIH2189975.1;Name=HIH2189975.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343748.1;locus_tag=ACYKJH_001915;product=DMT family transporter;protein_id=HIH2189975.1;transl_table=11 DBLQKK010000059.1 tpg gene 26917 27453 . + . ID=gene-ACYKJH_001916;Name=ACYKJH_001916;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001916 DBLQKK010000059.1 Protein Homology CDS 26917 27453 . + 0 ID=cds-HIH2189976.1;Parent=gene-ACYKJH_001916;Dbxref=NCBI_GP:HIH2189976.1;Name=HIH2189976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343749.1;locus_tag=ACYKJH_001916;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=HIH2189976.1;transl_table=11 DBLQKK010000059.1 tpg gene 27450 27995 . + . ID=gene-ACYKJH_001917;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=ACYKJH_001917 DBLQKK010000059.1 Protein Homology CDS 27450 27995 . + 0 ID=cds-HIH2189977.1;Parent=gene-ACYKJH_001917;Dbxref=NCBI_GP:HIH2189977.1;Name=HIH2189977.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343750.1;locus_tag=ACYKJH_001917;product=aminoacyl-tRNA hydrolase;protein_id=HIH2189977.1;transl_table=11 DBLQKK010000059.1 tpg gene 27997 29055 . + . ID=gene-ACYKJH_001918;Name=ACYKJH_001918;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001918 DBLQKK010000059.1 Protein Homology CDS 27997 29055 . + 0 ID=cds-HIH2189978.1;Parent=gene-ACYKJH_001918;Dbxref=NCBI_GP:HIH2189978.1;Name=HIH2189978.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343751.1;locus_tag=ACYKJH_001918;product=LptF/LptG family permease;protein_id=HIH2189978.1;transl_table=11 DBLQKK010000059.1 tpg gene 29099 30307 . + . ID=gene-ACYKJH_001919;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=ACYKJH_001919 DBLQKK010000059.1 Protein Homology CDS 29099 30307 . + 0 ID=cds-HIH2189979.1;Parent=gene-ACYKJH_001919;Dbxref=NCBI_GP:HIH2189979.1;Name=HIH2189979.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343752.1;locus_tag=ACYKJH_001919;product=diaminopimelate decarboxylase;protein_id=HIH2189979.1;transl_table=11 DBLQKK010000059.1 tpg gene 30309 31076 . + . ID=gene-ACYKJH_001920;Name=ACYKJH_001920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001920 DBLQKK010000059.1 Protein Homology CDS 30309 31076 . + 0 ID=cds-HIH2189980.1;Parent=gene-ACYKJH_001920;Dbxref=NCBI_GP:HIH2189980.1;Name=HIH2189980.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343753.1;locus_tag=ACYKJH_001920;product=HAD-IIA family hydrolase;protein_id=HIH2189980.1;transl_table=11 DBLQKK010000059.1 tpg gene 31064 32137 . + . ID=gene-ACYKJH_001921;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=ACYKJH_001921 DBLQKK010000059.1 Protein Homology CDS 31064 32137 . + 0 ID=cds-HIH2189981.1;Parent=gene-ACYKJH_001921;Dbxref=NCBI_GP:HIH2189981.1;Name=HIH2189981.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343754.1;locus_tag=ACYKJH_001921;product=prephenate dehydratase;protein_id=HIH2189981.1;transl_table=11 DBLQKK010000059.1 tpg gene 32127 33221 . + . ID=gene-ACYKJH_001922;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=ACYKJH_001922 DBLQKK010000059.1 Protein Homology CDS 32127 33221 . + 0 ID=cds-HIH2189982.1;Parent=gene-ACYKJH_001922;Dbxref=NCBI_GP:HIH2189982.1;Name=HIH2189982.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343755.1;locus_tag=ACYKJH_001922;product=histidinol-phosphate transaminase;protein_id=HIH2189982.1;transl_table=11 DBLQKK010000059.1 tpg gene 33273 34955 . + . ID=gene-ACYKJH_001923;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=ACYKJH_001923 DBLQKK010000059.1 Protein Homology CDS 33273 34955 . + 0 ID=cds-HIH2189983.1;Parent=gene-ACYKJH_001923;Dbxref=NCBI_GP:HIH2189983.1;Name=HIH2189983.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343756.1;locus_tag=ACYKJH_001923;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=HIH2189983.1;transl_table=11 DBLQKK010000059.1 tpg gene 34955 35983 . + . ID=gene-ACYKJH_001924;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=ACYKJH_001924 DBLQKK010000059.1 Protein Homology CDS 34955 35983 . + 0 ID=cds-HIH2189984.1;Parent=gene-ACYKJH_001924;Dbxref=NCBI_GP:HIH2189984.1;Name=HIH2189984.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343757.1;locus_tag=ACYKJH_001924;product=flagellar motor switch protein FliG;protein_id=HIH2189984.1;transl_table=11 DBLQKK010000059.1 tpg gene 35991 36821 . + . ID=gene-ACYKJH_001925;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=ACYKJH_001925 DBLQKK010000059.1 Protein Homology CDS 35991 36821 . + 0 ID=cds-HIH2189985.1;Parent=gene-ACYKJH_001925;Dbxref=NCBI_GP:HIH2189985.1;Name=HIH2189985.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343758.1;locus_tag=ACYKJH_001925;product=flagellar assembly protein FliH;protein_id=HIH2189985.1;transl_table=11 DBLQKK010000059.1 tpg gene 36814 38661 . + . ID=gene-ACYKJH_001926;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=ACYKJH_001926 DBLQKK010000059.1 Protein Homology CDS 36814 38661 . + 0 ID=cds-HIH2189986.1;Parent=gene-ACYKJH_001926;Dbxref=NCBI_GP:HIH2189986.1;Name=HIH2189986.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343759.1;locus_tag=ACYKJH_001926;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=HIH2189986.1;transl_table=11 DBLQKK010000059.1 tpg gene 38747 39157 . + . ID=gene-ACYKJH_001927;Name=perR;gbkey=Gene;gene=perR;gene_biotype=protein_coding;locus_tag=ACYKJH_001927 DBLQKK010000059.1 Protein Homology CDS 38747 39157 . + 0 ID=cds-HIH2189987.1;Parent=gene-ACYKJH_001927;Dbxref=NCBI_GP:HIH2189987.1;Name=HIH2189987.1;gbkey=CDS;gene=perR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343760.1;locus_tag=ACYKJH_001927;product=peroxide-responsive transcriptional repressor PerR;protein_id=HIH2189987.1;transl_table=11 DBLQKK010000059.1 tpg gene 39203 40399 . + . ID=gene-ACYKJH_001928;Name=ACYKJH_001928;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001928 DBLQKK010000059.1 Protein Homology CDS 39203 40399 . + 0 ID=cds-HIH2189988.1;Parent=gene-ACYKJH_001928;Dbxref=NCBI_GP:HIH2189988.1;Name=HIH2189988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343761.1;locus_tag=ACYKJH_001928;product=hypothetical protein;protein_id=HIH2189988.1;transl_table=11 DBLQKK010000059.1 tpg gene 40402 41109 . + . ID=gene-ACYKJH_001929;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=ACYKJH_001929 DBLQKK010000059.1 Protein Homology CDS 40402 41109 . + 0 ID=cds-HIH2189989.1;Parent=gene-ACYKJH_001929;Dbxref=NCBI_GP:HIH2189989.1;Name=HIH2189989.1;Ontology_term=GO:0042372,GO:0052624;gbkey=CDS;gene=ubiE;go_function=2-phytyl-1%2C4-naphthoquinone methyltransferase activity|0052624||IEA;go_process=phylloquinone biosynthetic process|0042372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343762.1;locus_tag=ACYKJH_001929;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=HIH2189989.1;transl_table=11 DBLQKK010000059.1 tpg gene 41106 42269 . + . ID=gene-ACYKJH_001930;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=ACYKJH_001930 DBLQKK010000059.1 Protein Homology CDS 41106 42269 . + 0 ID=cds-HIH2189990.1;Parent=gene-ACYKJH_001930;Dbxref=NCBI_GP:HIH2189990.1;Name=HIH2189990.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343763.1;locus_tag=ACYKJH_001930;product=exodeoxyribonuclease VII large subunit;protein_id=HIH2189990.1;transl_table=11 DBLQKK010000059.1 tpg gene 42279 43355 . + . ID=gene-ACYKJH_001931;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=ACYKJH_001931 DBLQKK010000059.1 Protein Homology CDS 42279 43355 . + 0 ID=cds-HIH2189991.1;Parent=gene-ACYKJH_001931;Dbxref=NCBI_GP:HIH2189991.1;Name=HIH2189991.1;Ontology_term=GO:0006564,GO:0004648;gbkey=CDS;gene=serC;go_function=O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343764.1;locus_tag=ACYKJH_001931;product=phosphoserine transaminase;protein_id=HIH2189991.1;transl_table=11 DBLQKK010000059.1 tpg gene 43352 43702 . + . ID=gene-ACYKJH_001932;Name=ACYKJH_001932;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001932 DBLQKK010000059.1 Protein Homology CDS 43352 43702 . + 0 ID=cds-HIH2189992.1;Parent=gene-ACYKJH_001932;Dbxref=NCBI_GP:HIH2189992.1;Name=HIH2189992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343765.1;locus_tag=ACYKJH_001932;product=RidA family protein;protein_id=HIH2189992.1;transl_table=11 DBLQKK010000059.1 tpg gene 43699 44673 . - . ID=gene-ACYKJH_001933;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=ACYKJH_001933 DBLQKK010000059.1 Protein Homology CDS 43699 44673 . - 0 ID=cds-HIH2189993.1;Parent=gene-ACYKJH_001933;Dbxref=NCBI_GP:HIH2189993.1;Name=HIH2189993.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;gene=fabH;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343766.1;locus_tag=ACYKJH_001933;product=beta-ketoacyl-ACP synthase III;protein_id=HIH2189993.1;transl_table=11 DBLQKK010000059.1 tpg gene 44666 45652 . - . ID=gene-ACYKJH_001934;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=ACYKJH_001934 DBLQKK010000059.1 Protein Homology CDS 44666 45652 . - 0 ID=cds-HIH2189994.1;Parent=gene-ACYKJH_001934;Dbxref=NCBI_GP:HIH2189994.1;Name=HIH2189994.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343767.1;locus_tag=ACYKJH_001934;product=phosphate acyltransferase PlsX;protein_id=HIH2189994.1;transl_table=11 DBLQKK010000059.1 tpg gene 45658 45804 . - . ID=gene-ACYKJH_001935;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=ACYKJH_001935 DBLQKK010000059.1 Protein Homology CDS 45658 45804 . - 0 ID=cds-HIH2189995.1;Parent=gene-ACYKJH_001935;Dbxref=NCBI_GP:HIH2189995.1;Name=HIH2189995.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343768.1;locus_tag=ACYKJH_001935;product=50S ribosomal protein L32;protein_id=HIH2189995.1;transl_table=11 DBLQKK010000059.1 tpg gene 45829 46182 . - . ID=gene-ACYKJH_001936;Name=ACYKJH_001936;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001936 DBLQKK010000059.1 Protein Homology CDS 45829 46182 . - 0 ID=cds-HIH2189996.1;Parent=gene-ACYKJH_001936;Dbxref=NCBI_GP:HIH2189996.1;Name=HIH2189996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343769.1;locus_tag=ACYKJH_001936;product=hypothetical protein;protein_id=HIH2189996.1;transl_table=11 DBLQKK010000059.1 tpg gene 46183 46596 . - . ID=gene-ACYKJH_001937;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=ACYKJH_001937 DBLQKK010000059.1 Protein Homology CDS 46183 46596 . - 0 ID=cds-HIH2189997.1;Parent=gene-ACYKJH_001937;Dbxref=NCBI_GP:HIH2189997.1;Name=HIH2189997.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343770.1;locus_tag=ACYKJH_001937;product=nucleoside-diphosphate kinase;protein_id=HIH2189997.1;transl_table=11 DBLQKK010000059.1 tpg gene 46709 46993 . - . ID=gene-ACYKJH_001938;Name=fdxA;gbkey=Gene;gene=fdxA;gene_biotype=protein_coding;locus_tag=ACYKJH_001938 DBLQKK010000059.1 Protein Homology CDS 46709 46993 . - 0 ID=cds-HIH2189998.1;Parent=gene-ACYKJH_001938;Dbxref=NCBI_GP:HIH2189998.1;Name=HIH2189998.1;gbkey=CDS;gene=fdxA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343771.1;locus_tag=ACYKJH_001938;product=DUF362 domain-containing protein;protein_id=HIH2189998.1;transl_table=11 DBLQKK010000059.1 tpg gene 47200 47796 . + . ID=gene-ACYKJH_001939;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=ACYKJH_001939 DBLQKK010000059.1 Protein Homology CDS 47200 47796 . + 0 ID=cds-HIH2189999.1;Parent=gene-ACYKJH_001939;Dbxref=NCBI_GP:HIH2189999.1;Name=HIH2189999.1;gbkey=CDS;gene=ahpC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343772.1;locus_tag=ACYKJH_001939;product=peroxiredoxin;protein_id=HIH2189999.1;transl_table=11 DBLQKK010000059.1 tpg gene 47915 49003 . + . ID=gene-ACYKJH_001940;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=ACYKJH_001940 DBLQKK010000059.1 Protein Homology CDS 47915 49003 . + 0 ID=cds-HIH2190000.1;Parent=gene-ACYKJH_001940;Dbxref=NCBI_GP:HIH2190000.1;Name=HIH2190000.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343773.1;locus_tag=ACYKJH_001940;product=flagellar biosynthesis protein FlhB;protein_id=HIH2190000.1;transl_table=11 DBLQKK010000059.1 tpg gene 49009 49294 . - . ID=gene-ACYKJH_001941;Name=ACYKJH_001941;end_range=49294,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKJH_001941;partial=true DBLQKK010000059.1 Protein Homology CDS 49009 49294 . - 1 ID=cds-HIH2190001.1;Parent=gene-ACYKJH_001941;Dbxref=NCBI_GP:HIH2190001.1;Name=HIH2190001.1;end_range=49294,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343774.1;locus_tag=ACYKJH_001941;partial=true;product=OmpA family protein;protein_id=HIH2190001.1;transl_table=11 ###