##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build PDT003063659.1 #!genome-build-accession NCBI_Assembly:GCA_054649185.1 #!annotation-date 01/22/2026 20:16:10 #!annotation-source NCBI ##sequence-region DBLQKW010000001.1 1 103886 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000001.1 tpg region 1 103886 . + . ID=DBLQKW010000001.1:1..103886;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000001.1 tpg gene 320 1384 . + . ID=gene-ACYKK2_000001;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=ACYKK2_000001 DBLQKW010000001.1 Protein Homology CDS 320 1384 . + 0 ID=cds-HIH2230696.1;Parent=gene-ACYKK2_000001;Dbxref=NCBI_GP:HIH2230696.1;Name=HIH2230696.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;gene=xerD;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344270.1;locus_tag=ACYKK2_000001;product=tyrosine-type recombinase/integrase;protein_id=HIH2230696.1;transl_table=11 DBLQKW010000001.1 tpg gene 1374 3158 . + . ID=gene-ACYKK2_000002;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=ACYKK2_000002 DBLQKW010000001.1 Protein Homology CDS 1374 3158 . + 0 ID=cds-HIH2230697.1;Parent=gene-ACYKK2_000002;Dbxref=NCBI_GP:HIH2230697.1;Name=HIH2230697.1;Ontology_term=GO:0030170;gbkey=CDS;gene=pabB;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344269.1;locus_tag=ACYKK2_000002;product=bifunctional chorismate-binding protein/class IV aminotransferase;protein_id=HIH2230697.1;transl_table=11 DBLQKW010000001.1 tpg gene 3155 3721 . + . ID=gene-ACYKK2_000003;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=ACYKK2_000003 DBLQKW010000001.1 Protein Homology CDS 3155 3721 . + 0 ID=cds-HIH2230698.1;Parent=gene-ACYKK2_000003;Dbxref=NCBI_GP:HIH2230698.1;Name=HIH2230698.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=pabA;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344268.1;locus_tag=ACYKK2_000003;product=anthranilate synthase component II;protein_id=HIH2230698.1;transl_table=11 DBLQKW010000001.1 tpg pseudogene 3846 4275 . + . ID=gene-ACYKK2_000004;Name=fspA2;gbkey=Gene;gene=fspA2;gene_biotype=pseudogene;locus_tag=ACYKK2_000004;pseudo=true DBLQKW010000001.1 Protein Homology CDS 3846 4275 . + 0 ID=cds-ACYKK2_000004;Parent=gene-ACYKK2_000004;Note=frameshifted;gbkey=CDS;gene=fspA2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002903009.1;locus_tag=ACYKK2_000004;product=flagellum-secreted nonflagellar protein FspA2;pseudo=true;transl_table=11 DBLQKW010000001.1 tpg gene 4341 5597 . + . ID=gene-ACYKK2_000005;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=ACYKK2_000005 DBLQKW010000001.1 Protein Homology CDS 4341 5597 . + 0 ID=cds-HIH2230699.1;Parent=gene-ACYKK2_000005;Dbxref=NCBI_GP:HIH2230699.1;Name=HIH2230699.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344265.1;locus_tag=ACYKK2_000005;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=HIH2230699.1;transl_table=11 DBLQKW010000001.1 tpg gene 5594 6754 . + . ID=gene-ACYKK2_000006;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=ACYKK2_000006 DBLQKW010000001.1 Protein Homology CDS 5594 6754 . + 0 ID=cds-HIH2230700.1;Parent=gene-ACYKK2_000006;Dbxref=NCBI_GP:HIH2230700.1;Name=HIH2230700.1;Ontology_term=GO:0030151,GO:0046872;gbkey=CDS;gene=moeA;go_function=molybdenum ion binding|0030151||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344264.1;locus_tag=ACYKK2_000006;product=molybdopterin molybdotransferase MoeA;protein_id=HIH2230700.1;transl_table=11 DBLQKW010000001.1 tpg gene 6776 7624 . - . ID=gene-ACYKK2_000007;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=ACYKK2_000007 DBLQKW010000001.1 Protein Homology CDS 6776 7624 . - 0 ID=cds-HIH2230701.1;Parent=gene-ACYKK2_000007;Dbxref=NCBI_GP:HIH2230701.1;Name=HIH2230701.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344263.1;locus_tag=ACYKK2_000007;product=signal peptidase I;protein_id=HIH2230701.1;transl_table=11 DBLQKW010000001.1 tpg gene 7634 8482 . - . ID=gene-ACYKK2_000008;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=ACYKK2_000008 DBLQKW010000001.1 Protein Homology CDS 7634 8482 . - 0 ID=cds-HIH2230702.1;Parent=gene-ACYKK2_000008;Dbxref=NCBI_GP:HIH2230702.1;Name=HIH2230702.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344262.1;locus_tag=ACYKK2_000008;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=HIH2230702.1;transl_table=11 DBLQKW010000001.1 tpg gene 8562 8909 . + . ID=gene-ACYKK2_000009;Name=ACYKK2_000009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000009 DBLQKW010000001.1 Protein Homology CDS 8562 8909 . + 0 ID=cds-HIH2230703.1;Parent=gene-ACYKK2_000009;Dbxref=NCBI_GP:HIH2230703.1;Name=HIH2230703.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344261.1;locus_tag=ACYKK2_000009;product=c-type cytochrome;protein_id=HIH2230703.1;transl_table=11 DBLQKW010000001.1 tpg gene 8906 10180 . + . ID=gene-ACYKK2_000010;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=ACYKK2_000010 DBLQKW010000001.1 Protein Homology CDS 8906 10180 . + 0 ID=cds-HIH2230704.1;Parent=gene-ACYKK2_000010;Dbxref=NCBI_GP:HIH2230704.1;Name=HIH2230704.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344260.1;locus_tag=ACYKK2_000010;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=HIH2230704.1;transl_table=11 DBLQKW010000001.1 tpg gene 10177 10506 . + . ID=gene-ACYKK2_000011;Name=ACYKK2_000011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000011 DBLQKW010000001.1 Protein Homology CDS 10177 10506 . + 0 ID=cds-HIH2230705.1;Parent=gene-ACYKK2_000011;Dbxref=NCBI_GP:HIH2230705.1;Name=HIH2230705.1;Ontology_term=GO:1902600,GO:0045259;gbkey=CDS;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344259.1;locus_tag=ACYKK2_000011;product=AtpZ/AtpI family protein;protein_id=HIH2230705.1;transl_table=11 DBLQKW010000001.1 tpg gene 10506 11009 . + . ID=gene-ACYKK2_000012;Name=ACYKK2_000012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000012 DBLQKW010000001.1 Protein Homology CDS 10506 11009 . + 0 ID=cds-HIH2230706.1;Parent=gene-ACYKK2_000012;Dbxref=NCBI_GP:HIH2230706.1;Name=HIH2230706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344258.1;locus_tag=ACYKK2_000012;product=hypothetical protein;protein_id=HIH2230706.1;transl_table=11 DBLQKW010000001.1 tpg gene 10987 12174 . + . ID=gene-ACYKK2_000013;Name=ACYKK2_000013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000013 DBLQKW010000001.1 Protein Homology CDS 10987 12174 . + 0 ID=cds-HIH2230707.1;Parent=gene-ACYKK2_000013;Dbxref=NCBI_GP:HIH2230707.1;Name=HIH2230707.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344257.1;locus_tag=ACYKK2_000013;product=MFS transporter;protein_id=HIH2230707.1;transl_table=11 DBLQKW010000001.1 tpg gene 12167 14263 . + . ID=gene-ACYKK2_000014;Name=ACYKK2_000014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000014 DBLQKW010000001.1 Protein Homology CDS 12167 14263 . + 0 ID=cds-HIH2230708.1;Parent=gene-ACYKK2_000014;Dbxref=NCBI_GP:HIH2230708.1;Name=HIH2230708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344256.1;locus_tag=ACYKK2_000014;product=flagellar hook-length control protein FliK;protein_id=HIH2230708.1;transl_table=11 DBLQKW010000001.1 tpg gene 14260 14541 . + . ID=gene-ACYKK2_000015;Name=ACYKK2_000015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000015 DBLQKW010000001.1 Protein Homology CDS 14260 14541 . + 0 ID=cds-HIH2230709.1;Parent=gene-ACYKK2_000015;Dbxref=NCBI_GP:HIH2230709.1;Name=HIH2230709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344255.1;locus_tag=ACYKK2_000015;product=FlhB-like flagellar biosynthesis protein;protein_id=HIH2230709.1;transl_table=11 DBLQKW010000001.1 tpg gene 14538 15338 . - . ID=gene-ACYKK2_000016;Name=psd;gbkey=Gene;gene=psd;gene_biotype=protein_coding;locus_tag=ACYKK2_000016 DBLQKW010000001.1 Protein Homology CDS 14538 15338 . - 0 ID=cds-HIH2230710.1;Parent=gene-ACYKK2_000016;Dbxref=NCBI_GP:HIH2230710.1;Name=HIH2230710.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=psd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344254.1;locus_tag=ACYKK2_000016;product=phosphatidylserine decarboxylase;protein_id=HIH2230710.1;transl_table=11 DBLQKW010000001.1 tpg gene 15335 16459 . - . ID=gene-ACYKK2_000017;Name=ACYKK2_000017;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000017 DBLQKW010000001.1 Protein Homology CDS 15335 16459 . - 0 ID=cds-HIH2230711.1;Parent=gene-ACYKK2_000017;Dbxref=NCBI_GP:HIH2230711.1;Name=HIH2230711.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344253.1;locus_tag=ACYKK2_000017;product=metallophosphoesterase;protein_id=HIH2230711.1;transl_table=11 DBLQKW010000001.1 tpg gene 16545 17840 . + . ID=gene-ACYKK2_000018;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=ACYKK2_000018 DBLQKW010000001.1 Protein Homology CDS 16545 17840 . + 0 ID=cds-HIH2230712.1;Parent=gene-ACYKK2_000018;Dbxref=NCBI_GP:HIH2230712.1;Name=HIH2230712.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344252.1;locus_tag=ACYKK2_000018;product=glutamate--tRNA ligase;protein_id=HIH2230712.1;transl_table=11 DBLQKW010000001.1 tpg gene 17843 18124 . + . ID=gene-ACYKK2_000019;Name=ACYKK2_000019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000019 DBLQKW010000001.1 Protein Homology CDS 17843 18124 . + 0 ID=cds-HIH2230713.1;Parent=gene-ACYKK2_000019;Dbxref=NCBI_GP:HIH2230713.1;Name=HIH2230713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344251.1;locus_tag=ACYKK2_000019;product=YggT family protein;protein_id=HIH2230713.1;transl_table=11 DBLQKW010000001.1 tpg gene 18121 19746 . + . ID=gene-ACYKK2_000020;Name=ACYKK2_000020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000020 DBLQKW010000001.1 Protein Homology CDS 18121 19746 . + 0 ID=cds-HIH2230714.1;Parent=gene-ACYKK2_000020;Dbxref=NCBI_GP:HIH2230714.1;Name=HIH2230714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344250.1;locus_tag=ACYKK2_000020;product=lytic transglycosylase domain-containing protein;protein_id=HIH2230714.1;transl_table=11 DBLQKW010000001.1 tpg gene 19643 20128 . - . ID=gene-ACYKK2_000021;Name=ACYKK2_000021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000021 DBLQKW010000001.1 Protein Homology CDS 19643 20128 . - 0 ID=cds-HIH2230715.1;Parent=gene-ACYKK2_000021;Dbxref=NCBI_GP:HIH2230715.1;Name=HIH2230715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344249.1;locus_tag=ACYKK2_000021;product=hypothetical protein;protein_id=HIH2230715.1;transl_table=11 DBLQKW010000001.1 tpg gene 20224 20715 . + . ID=gene-ACYKK2_000022;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=ACYKK2_000022 DBLQKW010000001.1 Protein Homology CDS 20224 20715 . + 0 ID=cds-HIH2230716.1;Parent=gene-ACYKK2_000022;Dbxref=NCBI_GP:HIH2230716.1;Name=HIH2230716.1;Ontology_term=GO:0006777,GO:0003824,GO:0005525;gbkey=CDS;gene=mobB;go_function=catalytic activity|0003824||IEA,GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344248.1;locus_tag=ACYKK2_000022;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=HIH2230716.1;transl_table=11 DBLQKW010000001.1 tpg gene 20717 21559 . + . ID=gene-ACYKK2_000023;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=ACYKK2_000023 DBLQKW010000001.1 Protein Homology CDS 20717 21559 . + 0 ID=cds-HIH2230717.1;Parent=gene-ACYKK2_000023;Dbxref=NCBI_GP:HIH2230717.1;Name=HIH2230717.1;gbkey=CDS;gene=fbp;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344247.1;locus_tag=ACYKK2_000023;product=class 1 fructose-bisphosphatase;protein_id=HIH2230717.1;transl_table=11 DBLQKW010000001.1 tpg gene 21552 21749 . + . ID=gene-ACYKK2_000024;Name=ACYKK2_000024;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000024 DBLQKW010000001.1 Protein Homology CDS 21552 21749 . + 0 ID=cds-HIH2230718.1;Parent=gene-ACYKK2_000024;Dbxref=NCBI_GP:HIH2230718.1;Name=HIH2230718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344246.1;locus_tag=ACYKK2_000024;product=hypothetical protein;protein_id=HIH2230718.1;transl_table=11 DBLQKW010000001.1 tpg gene 21759 23645 . + . ID=gene-ACYKK2_000025;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=ACYKK2_000025 DBLQKW010000001.1 Protein Homology CDS 21759 23645 . + 0 ID=cds-HIH2230719.1;Parent=gene-ACYKK2_000025;Dbxref=NCBI_GP:HIH2230719.1;Name=HIH2230719.1;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344245.1;locus_tag=ACYKK2_000025;product=methionine--tRNA ligase;protein_id=HIH2230719.1;transl_table=11 DBLQKW010000001.1 tpg gene 23649 24590 . + . ID=gene-ACYKK2_000026;Name=ACYKK2_000026;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000026 DBLQKW010000001.1 Protein Homology CDS 23649 24590 . + 0 ID=cds-HIH2230720.1;Parent=gene-ACYKK2_000026;Dbxref=NCBI_GP:HIH2230720.1;Name=HIH2230720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344244.1;locus_tag=ACYKK2_000026;product=hypothetical protein;protein_id=HIH2230720.1;transl_table=11 DBLQKW010000001.1 tpg gene 24582 25034 . - . ID=gene-ACYKK2_000027;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=ACYKK2_000027 DBLQKW010000001.1 Protein Homology CDS 24582 25034 . - 0 ID=cds-HIH2230721.1;Parent=gene-ACYKK2_000027;Dbxref=NCBI_GP:HIH2230721.1;Name=HIH2230721.1;Ontology_term=GO:0006281,GO:0032259,GO:0003677,GO:0003908,GO:0046872;gbkey=CDS;gene=ogt;go_function=DNA binding|0003677||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344243.1;locus_tag=ACYKK2_000027;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=HIH2230721.1;transl_table=11 DBLQKW010000001.1 tpg gene 25089 27635 . + . ID=gene-ACYKK2_000028;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=ACYKK2_000028 DBLQKW010000001.1 Protein Homology CDS 25089 27635 . + 0 ID=cds-HIH2230722.1;Parent=gene-ACYKK2_000028;Dbxref=NCBI_GP:HIH2230722.1;Name=HIH2230722.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539;gbkey=CDS;gene=acnB;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344242.1;locus_tag=ACYKK2_000028;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=HIH2230722.1;transl_table=11 DBLQKW010000001.1 tpg gene 27685 28923 . + . ID=gene-ACYKK2_000029;Name=ACYKK2_000029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000029 DBLQKW010000001.1 Protein Homology CDS 27685 28923 . + 0 ID=cds-HIH2230723.1;Parent=gene-ACYKK2_000029;Dbxref=NCBI_GP:HIH2230723.1;Name=HIH2230723.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344241.1;locus_tag=ACYKK2_000029;product=ankyrin repeat domain-containing protein;protein_id=HIH2230723.1;transl_table=11 DBLQKW010000001.1 tpg gene 28920 29669 . + . ID=gene-ACYKK2_000030;Name=ACYKK2_000030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000030 DBLQKW010000001.1 Protein Homology CDS 28920 29669 . + 0 ID=cds-HIH2230724.1;Parent=gene-ACYKK2_000030;Dbxref=NCBI_GP:HIH2230724.1;Name=HIH2230724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344240.1;locus_tag=ACYKK2_000030;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=HIH2230724.1;transl_table=11 DBLQKW010000001.1 tpg gene 29666 31399 . + . ID=gene-ACYKK2_000031;Name=ACYKK2_000031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000031 DBLQKW010000001.1 Protein Homology CDS 29666 31399 . + 0 ID=cds-HIH2230725.1;Parent=gene-ACYKK2_000031;Dbxref=NCBI_GP:HIH2230725.1;Name=HIH2230725.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344239.1;locus_tag=ACYKK2_000031;product=Na+/H+ antiporter NhaC family protein;protein_id=HIH2230725.1;transl_table=11 DBLQKW010000001.1 tpg gene 31396 32469 . + . ID=gene-ACYKK2_000032;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=ACYKK2_000032 DBLQKW010000001.1 Protein Homology CDS 31396 32469 . + 0 ID=cds-HIH2230726.1;Parent=gene-ACYKK2_000032;Dbxref=NCBI_GP:HIH2230726.1;Name=HIH2230726.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344238.1;locus_tag=ACYKK2_000032;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=HIH2230726.1;transl_table=11 DBLQKW010000001.1 tpg gene 32456 32872 . - . ID=gene-ACYKK2_000033;Name=ACYKK2_000033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000033 DBLQKW010000001.1 GeneMarkS-2+ CDS 32456 32872 . - 0 ID=cds-HIH2230727.1;Parent=gene-ACYKK2_000033;Dbxref=NCBI_GP:HIH2230727.1;Name=HIH2230727.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_000033;product=copper resistance protein CopD;protein_id=HIH2230727.1;transl_table=11 DBLQKW010000001.1 tpg gene 32991 33404 . + . ID=gene-ACYKK2_000034;Name=ACYKK2_000034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000034 DBLQKW010000001.1 Protein Homology CDS 32991 33404 . + 0 ID=cds-HIH2230728.1;Parent=gene-ACYKK2_000034;Dbxref=NCBI_GP:HIH2230728.1;Name=HIH2230728.1;Ontology_term=GO:0120225;gbkey=CDS;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344236.1;locus_tag=ACYKK2_000034;product=CoA-binding protein;protein_id=HIH2230728.1;transl_table=11 DBLQKW010000001.1 tpg gene 33404 34615 . + . ID=gene-ACYKK2_000035;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=ACYKK2_000035 DBLQKW010000001.1 Protein Homology CDS 33404 34615 . + 0 ID=cds-HIH2230729.1;Parent=gene-ACYKK2_000035;Dbxref=NCBI_GP:HIH2230729.1;Name=HIH2230729.1;Ontology_term=GO:0006567,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344235.1;locus_tag=ACYKK2_000035;product=threonine ammonia-lyase;protein_id=HIH2230729.1;transl_table=11 DBLQKW010000001.1 tpg gene 34612 35337 . - . ID=gene-ACYKK2_000036;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=ACYKK2_000036 DBLQKW010000001.1 Protein Homology CDS 34612 35337 . - 0 ID=cds-HIH2230730.1;Parent=gene-ACYKK2_000036;Dbxref=NCBI_GP:HIH2230730.1;Name=HIH2230730.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344234.1;locus_tag=ACYKK2_000036;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=HIH2230730.1;transl_table=11 DBLQKW010000001.1 tpg gene 35334 36359 . - . ID=gene-ACYKK2_000037;Name=ACYKK2_000037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000037 DBLQKW010000001.1 Protein Homology CDS 35334 36359 . - 0 ID=cds-HIH2230731.1;Parent=gene-ACYKK2_000037;Dbxref=NCBI_GP:HIH2230731.1;Name=HIH2230731.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344233.1;locus_tag=ACYKK2_000037;product=LptF/LptG family permease;protein_id=HIH2230731.1;transl_table=11 DBLQKW010000001.1 tpg gene 36359 37135 . - . ID=gene-ACYKK2_000038;Name=ACYKK2_000038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000038 DBLQKW010000001.1 Protein Homology CDS 36359 37135 . - 0 ID=cds-HIH2230732.1;Parent=gene-ACYKK2_000038;Dbxref=NCBI_GP:HIH2230732.1;Name=HIH2230732.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344232.1;locus_tag=ACYKK2_000038;product=prepilin peptidase;protein_id=HIH2230732.1;transl_table=11 DBLQKW010000001.1 tpg gene 37132 37800 . - . ID=gene-ACYKK2_000039;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=ACYKK2_000039 DBLQKW010000001.1 Protein Homology CDS 37132 37800 . - 0 ID=cds-HIH2230733.1;Parent=gene-ACYKK2_000039;Dbxref=NCBI_GP:HIH2230733.1;Name=HIH2230733.1;Ontology_term=GO:0009252,GO:0005737;gbkey=CDS;gene=uppS;go_component=cytoplasm|0005737||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344231.1;locus_tag=ACYKK2_000039;product=polyprenyl diphosphate synthase;protein_id=HIH2230733.1;transl_table=11 DBLQKW010000001.1 tpg gene 37804 38421 . - . ID=gene-ACYKK2_000040;Name=ACYKK2_000040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000040 DBLQKW010000001.1 Protein Homology CDS 37804 38421 . - 0 ID=cds-HIH2230734.1;Parent=gene-ACYKK2_000040;Dbxref=NCBI_GP:HIH2230734.1;Name=HIH2230734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344230.1;locus_tag=ACYKK2_000040;product=hypothetical protein;protein_id=HIH2230734.1;transl_table=11 DBLQKW010000001.1 tpg gene 38418 39572 . - . ID=gene-ACYKK2_000041;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=ACYKK2_000041 DBLQKW010000001.1 Protein Homology CDS 38418 39572 . - 0 ID=cds-HIH2230735.1;Parent=gene-ACYKK2_000041;Dbxref=NCBI_GP:HIH2230735.1;Name=HIH2230735.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344229.1;locus_tag=ACYKK2_000041;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=HIH2230735.1;transl_table=11 DBLQKW010000001.1 tpg gene 39569 40858 . - . ID=gene-ACYKK2_000042;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=ACYKK2_000042 DBLQKW010000001.1 Protein Homology CDS 39569 40858 . - 0 ID=cds-HIH2230736.1;Parent=gene-ACYKK2_000042;Dbxref=NCBI_GP:HIH2230736.1;Name=HIH2230736.1;Ontology_term=GO:0006048,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=UDP-N-acetylglucosamine biosynthetic process|0006048||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344228.1;locus_tag=ACYKK2_000042;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=HIH2230736.1;transl_table=11 DBLQKW010000001.1 tpg gene 41001 41735 . + . ID=gene-ACYKK2_000043;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=ACYKK2_000043 DBLQKW010000001.1 Protein Homology CDS 41001 41735 . + 0 ID=cds-HIH2230737.1;Parent=gene-ACYKK2_000043;Dbxref=NCBI_GP:HIH2230737.1;Name=HIH2230737.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344227.1;locus_tag=ACYKK2_000043;product=flagellar type III secretion system pore protein FliP;protein_id=HIH2230737.1;transl_table=11 DBLQKW010000001.1 tpg gene 41751 42521 . - . ID=gene-ACYKK2_000044;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=ACYKK2_000044 DBLQKW010000001.1 Protein Homology CDS 41751 42521 . - 0 ID=cds-HIH2230738.1;Parent=gene-ACYKK2_000044;Dbxref=NCBI_GP:HIH2230738.1;Name=HIH2230738.1;gbkey=CDS;gene=glnH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004315550.1;locus_tag=ACYKK2_000044;product=transporter substrate-binding domain-containing protein;protein_id=HIH2230738.1;transl_table=11 DBLQKW010000001.1 tpg gene 42615 43919 . - . ID=gene-ACYKK2_000045;Name=ACYKK2_000045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000045 DBLQKW010000001.1 Protein Homology CDS 42615 43919 . - 0 ID=cds-HIH2230739.1;Parent=gene-ACYKK2_000045;Dbxref=NCBI_GP:HIH2230739.1;Name=HIH2230739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014517240.1;locus_tag=ACYKK2_000045;product=Cj0814 family flagellar-dependent secreted protein;protein_id=HIH2230739.1;transl_table=11 DBLQKW010000001.1 tpg gene 44005 44724 . - . ID=gene-ACYKK2_000046;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=ACYKK2_000046 DBLQKW010000001.1 Protein Homology CDS 44005 44724 . - 0 ID=cds-HIH2230740.1;Parent=gene-ACYKK2_000046;Dbxref=NCBI_GP:HIH2230740.1;Name=HIH2230740.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344220.1;locus_tag=ACYKK2_000046;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=HIH2230740.1;transl_table=11 DBLQKW010000001.1 tpg gene 44721 46133 . - . ID=gene-ACYKK2_000047;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=ACYKK2_000047 DBLQKW010000001.1 Protein Homology CDS 44721 46133 . - 0 ID=cds-HIH2230741.1;Parent=gene-ACYKK2_000047;Dbxref=NCBI_GP:HIH2230741.1;Name=HIH2230741.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344219.1;locus_tag=ACYKK2_000047;product=threonine synthase;protein_id=HIH2230741.1;transl_table=11 DBLQKW010000001.1 tpg gene 46130 47056 . - . ID=gene-ACYKK2_000048;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=ACYKK2_000048 DBLQKW010000001.1 Protein Homology CDS 46130 47056 . - 0 ID=cds-HIH2230742.1;Parent=gene-ACYKK2_000048;Dbxref=NCBI_GP:HIH2230742.1;Name=HIH2230742.1;Ontology_term=GO:0009245,GO:0005524,GO:0009029;gbkey=CDS;gene=lpxK;go_function=ATP binding|0005524||IEA,tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344218.1;locus_tag=ACYKK2_000048;product=tetraacyldisaccharide 4'-kinase;protein_id=HIH2230742.1;transl_table=11 DBLQKW010000001.1 tpg gene 47060 47800 . - . ID=gene-ACYKK2_000049;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=ACYKK2_000049 DBLQKW010000001.1 Protein Homology CDS 47060 47800 . - 0 ID=cds-HIH2230743.1;Parent=gene-ACYKK2_000049;Dbxref=NCBI_GP:HIH2230743.1;Name=HIH2230743.1;Ontology_term=GO:0009435,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344217.1;locus_tag=ACYKK2_000049;product=NAD+ synthase;protein_id=HIH2230743.1;transl_table=11 DBLQKW010000001.1 tpg gene 47874 48470 . + . ID=gene-ACYKK2_000050;Name=ACYKK2_000050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000050 DBLQKW010000001.1 Protein Homology CDS 47874 48470 . + 0 ID=cds-HIH2230744.1;Parent=gene-ACYKK2_000050;Dbxref=NCBI_GP:HIH2230744.1;Name=HIH2230744.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344216.1;locus_tag=ACYKK2_000050;product=MBL fold metallo-hydrolase;protein_id=HIH2230744.1;transl_table=11 DBLQKW010000001.1 tpg gene 48482 48787 . + . ID=gene-ACYKK2_000051;Name=ACYKK2_000051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000051 DBLQKW010000001.1 Protein Homology CDS 48482 48787 . + 0 ID=cds-HIH2230745.1;Parent=gene-ACYKK2_000051;Dbxref=NCBI_GP:HIH2230745.1;Name=HIH2230745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344215.1;locus_tag=ACYKK2_000051;product=hypothetical protein;protein_id=HIH2230745.1;transl_table=11 DBLQKW010000001.1 tpg gene 48828 49607 . - . ID=gene-ACYKK2_000052;Name=ACYKK2_000052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000052 DBLQKW010000001.1 Protein Homology CDS 48828 49607 . - 0 ID=cds-HIH2230746.1;Parent=gene-ACYKK2_000052;Dbxref=NCBI_GP:HIH2230746.1;Name=HIH2230746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344214.1;locus_tag=ACYKK2_000052;product=enoyl-ACP reductase;protein_id=HIH2230746.1;transl_table=11 DBLQKW010000001.1 tpg gene 49607 50503 . - . ID=gene-ACYKK2_000053;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=ACYKK2_000053 DBLQKW010000001.1 Protein Homology CDS 49607 50503 . - 0 ID=cds-HIH2230747.1;Parent=gene-ACYKK2_000053;Dbxref=NCBI_GP:HIH2230747.1;Name=HIH2230747.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344213.1;locus_tag=ACYKK2_000053;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=HIH2230747.1;transl_table=11 DBLQKW010000001.1 tpg gene 50496 51746 . - . ID=gene-ACYKK2_000054;Name=ACYKK2_000054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000054 DBLQKW010000001.1 Protein Homology CDS 50496 51746 . - 0 ID=cds-HIH2230748.1;Parent=gene-ACYKK2_000054;Dbxref=NCBI_GP:HIH2230748.1;Name=HIH2230748.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344212.1;locus_tag=ACYKK2_000054;product=M16 family metallopeptidase;protein_id=HIH2230748.1;transl_table=11 DBLQKW010000001.1 tpg gene 51743 52801 . - . ID=gene-ACYKK2_000055;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=ACYKK2_000055 DBLQKW010000001.1 Protein Homology CDS 51743 52801 . - 0 ID=cds-HIH2230749.1;Parent=gene-ACYKK2_000055;Dbxref=NCBI_GP:HIH2230749.1;Name=HIH2230749.1;Ontology_term=GO:0006207,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344211.1;locus_tag=ACYKK2_000055;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=HIH2230749.1;transl_table=11 DBLQKW010000001.1 tpg gene 52833 54575 . - . ID=gene-ACYKK2_000056;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=ACYKK2_000056 DBLQKW010000001.1 Protein Homology CDS 52833 54575 . - 0 ID=cds-HIH2230750.1;Parent=gene-ACYKK2_000056;Dbxref=NCBI_GP:HIH2230750.1;Name=HIH2230750.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;gene=msbA;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344210.1;locus_tag=ACYKK2_000056;product=ABC transporter ATP-binding protein;protein_id=HIH2230750.1;transl_table=11 DBLQKW010000001.1 tpg gene 54568 55956 . - . ID=gene-ACYKK2_000057;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=ACYKK2_000057 DBLQKW010000001.1 Protein Homology CDS 54568 55956 . - 0 ID=cds-HIH2230751.1;Parent=gene-ACYKK2_000057;Dbxref=NCBI_GP:HIH2230751.1;Name=HIH2230751.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344209.1;locus_tag=ACYKK2_000057;product=cysteine--tRNA ligase;protein_id=HIH2230751.1;transl_table=11 DBLQKW010000001.1 tpg gene 55956 57407 . - . ID=gene-ACYKK2_000058;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=ACYKK2_000058 DBLQKW010000001.1 Protein Homology CDS 55956 57407 . - 0 ID=cds-HIH2230752.1;Parent=gene-ACYKK2_000058;Dbxref=NCBI_GP:HIH2230752.1;Name=HIH2230752.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344208.1;locus_tag=ACYKK2_000058;product=murein biosynthesis integral membrane protein MurJ;protein_id=HIH2230752.1;transl_table=11 DBLQKW010000001.1 tpg gene 57511 59370 . + . ID=gene-ACYKK2_000059;Name=ACYKK2_000059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000059 DBLQKW010000001.1 Protein Homology CDS 57511 59370 . + 0 ID=cds-HIH2230753.1;Parent=gene-ACYKK2_000059;Dbxref=NCBI_GP:HIH2230753.1;Name=HIH2230753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344207.1;locus_tag=ACYKK2_000059;product=flagellar assembly protein A;protein_id=HIH2230753.1;transl_table=11 DBLQKW010000001.1 tpg gene 59346 59897 . + . ID=gene-ACYKK2_000060;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=ACYKK2_000060 DBLQKW010000001.1 Protein Homology CDS 59346 59897 . + 0 ID=cds-HIH2230754.1;Parent=gene-ACYKK2_000060;Dbxref=NCBI_GP:HIH2230754.1;Name=HIH2230754.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344206.1;locus_tag=ACYKK2_000060;product=Holliday junction branch migration protein RuvA;protein_id=HIH2230754.1;transl_table=11 DBLQKW010000001.1 tpg gene 59907 60947 . + . ID=gene-ACYKK2_000061;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=ACYKK2_000061 DBLQKW010000001.1 Protein Homology CDS 59907 60947 . + 0 ID=cds-HIH2230755.1;Parent=gene-ACYKK2_000061;Dbxref=NCBI_GP:HIH2230755.1;Name=HIH2230755.1;Ontology_term=GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;gene=ddlA;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344205.1;locus_tag=ACYKK2_000061;product=D-alanine--D-alanine ligase;protein_id=HIH2230755.1;transl_table=11 DBLQKW010000001.1 tpg gene 61007 61222 . + . ID=gene-ACYKK2_000062;Name=ACYKK2_000062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000062 DBLQKW010000001.1 Protein Homology CDS 61007 61222 . + 0 ID=cds-HIH2230756.1;Parent=gene-ACYKK2_000062;Dbxref=NCBI_GP:HIH2230756.1;Name=HIH2230756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344204.1;locus_tag=ACYKK2_000062;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=HIH2230756.1;transl_table=11 DBLQKW010000001.1 tpg gene 61224 61943 . + . ID=gene-ACYKK2_000063;Name=ACYKK2_000063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000063 DBLQKW010000001.1 Protein Homology CDS 61224 61943 . + 0 ID=cds-HIH2230757.1;Parent=gene-ACYKK2_000063;Dbxref=NCBI_GP:HIH2230757.1;Name=HIH2230757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344203.1;locus_tag=ACYKK2_000063;product=alpha/beta fold hydrolase;protein_id=HIH2230757.1;transl_table=11 DBLQKW010000001.1 tpg gene 61944 63371 . + . ID=gene-ACYKK2_000064;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=ACYKK2_000064 DBLQKW010000001.1 Protein Homology CDS 61944 63371 . + 0 ID=cds-HIH2230758.1;Parent=gene-ACYKK2_000064;Dbxref=NCBI_GP:HIH2230758.1;Name=HIH2230758.1;Ontology_term=GO:0009058,GO:0005524,GO:0016881;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344202.1;locus_tag=ACYKK2_000064;product=Mur ligase family protein;protein_id=HIH2230758.1;transl_table=11 DBLQKW010000001.1 tpg pseudogene 63429 64768 . - . ID=gene-ACYKK2_000065;Name=ACYKK2_000065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_000065;pseudo=true DBLQKW010000001.1 Protein Homology CDS 63429 64768 . - 0 ID=cds-ACYKK2_000065;Parent=gene-ACYKK2_000065;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002776729.1;locus_tag=ACYKK2_000065;product=Cj0814 family flagellar-dependent secreted protein;pseudo=true;transl_table=11 DBLQKW010000001.1 tpg gene 64867 65886 . - . ID=gene-ACYKK2_000066;Name=flgS;gbkey=Gene;gene=flgS;gene_biotype=protein_coding;locus_tag=ACYKK2_000066 DBLQKW010000001.1 Protein Homology CDS 64867 65886 . - 0 ID=cds-HIH2230759.1;Parent=gene-ACYKK2_000066;Dbxref=NCBI_GP:HIH2230759.1;Name=HIH2230759.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0009927;gbkey=CDS;gene=flgS;go_function=ATP binding|0005524||IEA,histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344200.1;locus_tag=ACYKK2_000066;product=fla regulon two-component system sensor histidine kinase FlgS;protein_id=HIH2230759.1;transl_table=11 DBLQKW010000001.1 tpg gene 65890 66768 . - . ID=gene-ACYKK2_000067;Name=ACYKK2_000067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000067 DBLQKW010000001.1 Protein Homology CDS 65890 66768 . - 0 ID=cds-HIH2230760.1;Parent=gene-ACYKK2_000067;Dbxref=NCBI_GP:HIH2230760.1;Name=HIH2230760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344199.1;locus_tag=ACYKK2_000067;product=DUF234 domain-containing protein;protein_id=HIH2230760.1;transl_table=11 DBLQKW010000001.1 tpg gene 66804 68078 . + . ID=gene-ACYKK2_000068;Name=ACYKK2_000068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000068 DBLQKW010000001.1 Protein Homology CDS 66804 68078 . + 0 ID=cds-HIH2230761.1;Parent=gene-ACYKK2_000068;Dbxref=NCBI_GP:HIH2230761.1;Name=HIH2230761.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344198.1;locus_tag=ACYKK2_000068;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=HIH2230761.1;transl_table=11 DBLQKW010000001.1 tpg gene 68075 68899 . - . ID=gene-ACYKK2_000069;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=ACYKK2_000069 DBLQKW010000001.1 Protein Homology CDS 68075 68899 . - 0 ID=cds-HIH2230762.1;Parent=gene-ACYKK2_000069;Dbxref=NCBI_GP:HIH2230762.1;Name=HIH2230762.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344197.1;locus_tag=ACYKK2_000069;product=formyltetrahydrofolate deformylase;protein_id=HIH2230762.1;transl_table=11 DBLQKW010000001.1 tpg gene 68896 70014 . - . ID=gene-ACYKK2_000070;Name=cca;gbkey=Gene;gene=cca;gene_biotype=protein_coding;locus_tag=ACYKK2_000070 DBLQKW010000001.1 Protein Homology CDS 68896 70014 . - 0 ID=cds-HIH2230763.1;Parent=gene-ACYKK2_000070;Dbxref=NCBI_GP:HIH2230763.1;Name=HIH2230763.1;gbkey=CDS;gene=cca;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344196.1;locus_tag=ACYKK2_000070;product=CCA tRNA nucleotidyltransferase;protein_id=HIH2230763.1;transl_table=11 DBLQKW010000001.1 tpg gene 69983 70474 . - . ID=gene-ACYKK2_000071;Name=ciaD;gbkey=Gene;gene=ciaD;gene_biotype=protein_coding;locus_tag=ACYKK2_000071 DBLQKW010000001.1 Protein Homology CDS 69983 70474 . - 0 ID=cds-HIH2230764.1;Parent=gene-ACYKK2_000071;Dbxref=NCBI_GP:HIH2230764.1;Name=HIH2230764.1;gbkey=CDS;gene=ciaD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344195.1;locus_tag=ACYKK2_000071;product=effector protein CiaD;protein_id=HIH2230764.1;transl_table=11 DBLQKW010000001.1 tpg gene 70471 70719 . - . ID=gene-ACYKK2_000072;Name=ACYKK2_000072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000072 DBLQKW010000001.1 Protein Homology CDS 70471 70719 . - 0 ID=cds-HIH2230765.1;Parent=gene-ACYKK2_000072;Dbxref=NCBI_GP:HIH2230765.1;Name=HIH2230765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344194.1;locus_tag=ACYKK2_000072;product=tetratricopeptide repeat protein;protein_id=HIH2230765.1;transl_table=11 DBLQKW010000001.1 tpg gene 70798 70971 . - . ID=gene-ACYKK2_000073;Name=tatA2;gbkey=Gene;gene=tatA2;gene_biotype=protein_coding;locus_tag=ACYKK2_000073 DBLQKW010000001.1 Protein Homology CDS 70798 70971 . - 0 ID=cds-HIH2230766.1;Parent=gene-ACYKK2_000073;Dbxref=NCBI_GP:HIH2230766.1;Name=HIH2230766.1;gbkey=CDS;gene=tatA2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344193.1;locus_tag=ACYKK2_000073;product=Sec-independent protein translocase subunit TatA2;protein_id=HIH2230766.1;transl_table=11 DBLQKW010000001.1 tpg gene 70981 71319 . - . ID=gene-ACYKK2_000074;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=ACYKK2_000074 DBLQKW010000001.1 Protein Homology CDS 70981 71319 . - 0 ID=cds-HIH2230767.1;Parent=gene-ACYKK2_000074;Dbxref=NCBI_GP:HIH2230767.1;Name=HIH2230767.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344192.1;locus_tag=ACYKK2_000074;product=chaperone NapD;protein_id=HIH2230767.1;transl_table=11 DBLQKW010000001.1 tpg gene 71312 72226 . - . ID=gene-ACYKK2_000075;Name=napL;gbkey=Gene;gene=napL;gene_biotype=protein_coding;locus_tag=ACYKK2_000075 DBLQKW010000001.1 Protein Homology CDS 71312 72226 . - 0 ID=cds-HIH2230768.1;Parent=gene-ACYKK2_000075;Dbxref=NCBI_GP:HIH2230768.1;Name=HIH2230768.1;gbkey=CDS;gene=napL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344191.1;locus_tag=ACYKK2_000075;product=WD40 repeat domain-containing protein;protein_id=HIH2230768.1;transl_table=11 DBLQKW010000001.1 tpg gene 72231 72755 . - . ID=gene-ACYKK2_000076;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=ACYKK2_000076 DBLQKW010000001.1 Protein Homology CDS 72231 72755 . - 0 ID=cds-HIH2230769.1;Parent=gene-ACYKK2_000076;Dbxref=NCBI_GP:HIH2230769.1;Name=HIH2230769.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344190.1;locus_tag=ACYKK2_000076;product=nitrate reductase cytochrome c-type subunit;protein_id=HIH2230769.1;transl_table=11 DBLQKW010000001.1 tpg gene 72752 73534 . - . ID=gene-ACYKK2_000077;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=ACYKK2_000077 DBLQKW010000001.1 Protein Homology CDS 72752 73534 . - 0 ID=cds-HIH2230770.1;Parent=gene-ACYKK2_000077;Dbxref=NCBI_GP:HIH2230770.1;Name=HIH2230770.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344189.1;locus_tag=ACYKK2_000077;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=HIH2230770.1;transl_table=11 DBLQKW010000001.1 tpg gene 73531 74271 . - . ID=gene-ACYKK2_000078;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=ACYKK2_000078 DBLQKW010000001.1 Protein Homology CDS 73531 74271 . - 0 ID=cds-HIH2230771.1;Parent=gene-ACYKK2_000078;Dbxref=NCBI_GP:HIH2230771.1;Name=HIH2230771.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344188.1;locus_tag=ACYKK2_000078;product=ferredoxin-type protein NapG;protein_id=HIH2230771.1;transl_table=11 DBLQKW010000001.1 tpg gene 74289 77063 . - . ID=gene-ACYKK2_000079;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=ACYKK2_000079 DBLQKW010000001.1 Protein Homology CDS 74289 77063 . - 0 ID=cds-HIH2230772.1;Parent=gene-ACYKK2_000079;Dbxref=NCBI_GP:HIH2230772.1;Name=HIH2230772.1;Ontology_term=GO:0042126,GO:0008940,GO:0030151,GO:0009325;gbkey=CDS;gene=napA;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344187.1;locus_tag=ACYKK2_000079;product=periplasmic nitrate reductase subunit alpha;protein_id=HIH2230772.1;transl_table=11 DBLQKW010000001.1 tpg gene 77310 77837 . - . ID=gene-ACYKK2_000080;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=ACYKK2_000080 DBLQKW010000001.1 Protein Homology CDS 77310 77837 . - 0 ID=cds-HIH2230773.1;Parent=gene-ACYKK2_000080;Dbxref=NCBI_GP:HIH2230773.1;Name=HIH2230773.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344186.1;locus_tag=ACYKK2_000080;product=thiol peroxidase;protein_id=HIH2230773.1;transl_table=11 DBLQKW010000001.1 tpg pseudogene 77936 78677 . - . ID=gene-ACYKK2_000081;Name=peb2;gbkey=Gene;gene=peb2;gene_biotype=pseudogene;locus_tag=ACYKK2_000081;pseudo=true DBLQKW010000001.1 Protein Homology CDS 77936 78677 . - 0 ID=cds-ACYKK2_000081;Parent=gene-ACYKK2_000081;Note=frameshifted;gbkey=CDS;gene=peb2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344185.1;locus_tag=ACYKK2_000081;product=AcfC family adhesin PEB2;pseudo=true;transl_table=11 DBLQKW010000001.1 tpg gene 78718 80748 . - . ID=gene-ACYKK2_000082;Name=ACYKK2_000082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000082 DBLQKW010000001.1 Protein Homology CDS 78718 80748 . - 0 ID=cds-HIH2230774.1;Parent=gene-ACYKK2_000082;Dbxref=NCBI_GP:HIH2230774.1;Name=HIH2230774.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524,GO:0016853,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,isomerase activity|0016853||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344184.1;locus_tag=ACYKK2_000082;product=ATP-dependent helicase;protein_id=HIH2230774.1;transl_table=11 DBLQKW010000001.1 tpg gene 80876 81898 . + . ID=gene-ACYKK2_000083;Name=ACYKK2_000083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000083 DBLQKW010000001.1 Protein Homology CDS 80876 81898 . + 0 ID=cds-HIH2230775.1;Parent=gene-ACYKK2_000083;Dbxref=NCBI_GP:HIH2230775.1;Name=HIH2230775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344183.1;locus_tag=ACYKK2_000083;product=hypothetical protein;protein_id=HIH2230775.1;transl_table=11 DBLQKW010000001.1 tpg gene 81921 84533 . + . ID=gene-ACYKK2_000084;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=ACYKK2_000084 DBLQKW010000001.1 Protein Homology CDS 81921 84533 . + 0 ID=cds-HIH2230776.1;Parent=gene-ACYKK2_000084;Dbxref=NCBI_GP:HIH2230776.1;Name=HIH2230776.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;gene=valS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344182.1;locus_tag=ACYKK2_000084;product=valine--tRNA ligase;protein_id=HIH2230776.1;transl_table=11 DBLQKW010000001.1 tpg gene 84538 85548 . + . ID=gene-ACYKK2_000085;Name=ACYKK2_000085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000085 DBLQKW010000001.1 Protein Homology CDS 84538 85548 . + 0 ID=cds-HIH2230777.1;Parent=gene-ACYKK2_000085;Dbxref=NCBI_GP:HIH2230777.1;Name=HIH2230777.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344181.1;locus_tag=ACYKK2_000085;product=methionine ABC transporter ATP-binding protein;protein_id=HIH2230777.1;transl_table=11 DBLQKW010000001.1 tpg gene 85545 86456 . + . ID=gene-ACYKK2_000086;Name=ACYKK2_000086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000086 DBLQKW010000001.1 Protein Homology CDS 85545 86456 . + 0 ID=cds-HIH2230778.1;Parent=gene-ACYKK2_000086;Dbxref=NCBI_GP:HIH2230778.1;Name=HIH2230778.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344180.1;locus_tag=ACYKK2_000086;product=methionine ABC transporter permease;protein_id=HIH2230778.1;transl_table=11 DBLQKW010000001.1 tpg gene 86648 87421 . + . ID=gene-ACYKK2_000087;Name=ACYKK2_000087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000087 DBLQKW010000001.1 Protein Homology CDS 86648 87421 . + 0 ID=cds-HIH2230779.1;Parent=gene-ACYKK2_000087;Dbxref=NCBI_GP:HIH2230779.1;Name=HIH2230779.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344179.1;locus_tag=ACYKK2_000087;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=HIH2230779.1;transl_table=11 DBLQKW010000001.1 tpg gene 87470 88240 . + . ID=gene-ACYKK2_000088;Name=ACYKK2_000088;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000088 DBLQKW010000001.1 Protein Homology CDS 87470 88240 . + 0 ID=cds-HIH2230780.1;Parent=gene-ACYKK2_000088;Dbxref=NCBI_GP:HIH2230780.1;Name=HIH2230780.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344178.1;locus_tag=ACYKK2_000088;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=HIH2230780.1;transl_table=11 DBLQKW010000001.1 tpg gene 88250 89026 . + . ID=gene-ACYKK2_000089;Name=ACYKK2_000089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000089 DBLQKW010000001.1 Protein Homology CDS 88250 89026 . + 0 ID=cds-HIH2230781.1;Parent=gene-ACYKK2_000089;Dbxref=NCBI_GP:HIH2230781.1;Name=HIH2230781.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344177.1;locus_tag=ACYKK2_000089;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=HIH2230781.1;transl_table=11 DBLQKW010000001.1 tpg gene 89110 89772 . + . ID=gene-ACYKK2_000090;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=ACYKK2_000090 DBLQKW010000001.1 Protein Homology CDS 89110 89772 . + 0 ID=cds-HIH2230782.1;Parent=gene-ACYKK2_000090;Dbxref=NCBI_GP:HIH2230782.1;Name=HIH2230782.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344176.1;locus_tag=ACYKK2_000090;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=HIH2230782.1;transl_table=11 DBLQKW010000001.1 tpg gene 89769 90332 . + . ID=gene-ACYKK2_000091;Name=ACYKK2_000091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000091 DBLQKW010000001.1 Protein Homology CDS 89769 90332 . + 0 ID=cds-HIH2230783.1;Parent=gene-ACYKK2_000091;Dbxref=NCBI_GP:HIH2230783.1;Name=HIH2230783.1;Ontology_term=GO:0010181,GO:0016831,GO:0106141;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,flavin prenyltransferase activity|0106141||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344175.1;locus_tag=ACYKK2_000091;product=UbiX family flavin prenyltransferase;protein_id=HIH2230783.1;transl_table=11 DBLQKW010000001.1 tpg gene 90372 90848 . + . ID=gene-ACYKK2_000092;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=ACYKK2_000092 DBLQKW010000001.1 Protein Homology CDS 90372 90848 . + 0 ID=cds-HIH2230784.1;Parent=gene-ACYKK2_000092;Dbxref=NCBI_GP:HIH2230784.1;Name=HIH2230784.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344174.1;locus_tag=ACYKK2_000092;product=pantetheine-phosphate adenylyltransferase;protein_id=HIH2230784.1;transl_table=11 DBLQKW010000001.1 tpg gene 90839 91417 . + . ID=gene-ACYKK2_000093;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=ACYKK2_000093 DBLQKW010000001.1 Protein Homology CDS 90839 91417 . + 0 ID=cds-HIH2230785.1;Parent=gene-ACYKK2_000093;Dbxref=NCBI_GP:HIH2230785.1;Name=HIH2230785.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344173.1;locus_tag=ACYKK2_000093;product=dTMP kinase;protein_id=HIH2230785.1;transl_table=11 DBLQKW010000001.1 tpg gene 91414 92640 . + . ID=gene-ACYKK2_000094;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=ACYKK2_000094 DBLQKW010000001.1 Protein Homology CDS 91414 92640 . + 0 ID=cds-HIH2230786.1;Parent=gene-ACYKK2_000094;Dbxref=NCBI_GP:HIH2230786.1;Name=HIH2230786.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344172.1;locus_tag=ACYKK2_000094;product=histidine--tRNA ligase;protein_id=HIH2230786.1;transl_table=11 DBLQKW010000001.1 tpg gene 92637 94472 . + . ID=gene-ACYKK2_000095;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=ACYKK2_000095 DBLQKW010000001.1 Protein Homology CDS 92637 94472 . + 0 ID=cds-HIH2230787.1;Parent=gene-ACYKK2_000095;Dbxref=NCBI_GP:HIH2230787.1;Name=HIH2230787.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344171.1;locus_tag=ACYKK2_000095;product=biosynthetic arginine decarboxylase;protein_id=HIH2230787.1;transl_table=11 DBLQKW010000001.1 tpg gene 94473 95111 . + . ID=gene-ACYKK2_000096;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=ACYKK2_000096 DBLQKW010000001.1 Protein Homology CDS 94473 95111 . + 0 ID=cds-HIH2230788.1;Parent=gene-ACYKK2_000096;Dbxref=NCBI_GP:HIH2230788.1;Name=HIH2230788.1;Ontology_term=GO:0006535,GO:0009001,GO:0005737;gbkey=CDS;gene=cysE;go_component=cytoplasm|0005737||IEA;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344170.1;locus_tag=ACYKK2_000096;product=serine O-acetyltransferase;protein_id=HIH2230788.1;transl_table=11 DBLQKW010000001.1 tpg gene 95283 96452 . + . ID=gene-ACYKK2_000097;Name=aspB;gbkey=Gene;gene=aspB;gene_biotype=protein_coding;locus_tag=ACYKK2_000097 DBLQKW010000001.1 Protein Homology CDS 95283 96452 . + 0 ID=cds-HIH2230789.1;Parent=gene-ACYKK2_000097;Dbxref=NCBI_GP:HIH2230789.1;Name=HIH2230789.1;Ontology_term=GO:0009058,GO:0008483,GO:0030170;gbkey=CDS;gene=aspB;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344169.1;locus_tag=ACYKK2_000097;product=pyridoxal phosphate-dependent aminotransferase;protein_id=HIH2230789.1;transl_table=11 DBLQKW010000001.1 tpg gene 96502 96843 . - . ID=gene-ACYKK2_000098;Name=ACYKK2_000098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000098 DBLQKW010000001.1 Protein Homology CDS 96502 96843 . - 0 ID=cds-HIH2230790.1;Parent=gene-ACYKK2_000098;Dbxref=NCBI_GP:HIH2230790.1;Name=HIH2230790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344168.1;locus_tag=ACYKK2_000098;product=cupin domain-containing protein;protein_id=HIH2230790.1;transl_table=11 DBLQKW010000001.1 tpg gene 96913 97935 . - . ID=gene-ACYKK2_000099;Name=ACYKK2_000099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000099 DBLQKW010000001.1 Protein Homology CDS 96913 97935 . - 0 ID=cds-HIH2230791.1;Parent=gene-ACYKK2_000099;Dbxref=NCBI_GP:HIH2230791.1;Name=HIH2230791.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344167.1;locus_tag=ACYKK2_000099;product=MBL fold metallo-hydrolase;protein_id=HIH2230791.1;transl_table=11 DBLQKW010000001.1 tpg pseudogene 98040 98149 . + . ID=gene-ACYKK2_000100;Name=ACYKK2_000100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_000100;pseudo=true DBLQKW010000001.1 Protein Homology CDS 98040 98149 . + 0 ID=cds-ACYKK2_000100;Parent=gene-ACYKK2_000100;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002780055.1;locus_tag=ACYKK2_000100;product=flagellar basal body-associated FliL family protein;pseudo=true;transl_table=11 DBLQKW010000001.1 tpg gene 98195 100066 . - . ID=gene-ACYKK2_000101;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=ACYKK2_000101 DBLQKW010000001.1 Protein Homology CDS 98195 100066 . - 0 ID=cds-HIH2230792.1;Parent=gene-ACYKK2_000101;Dbxref=NCBI_GP:HIH2230792.1;Name=HIH2230792.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344166.1;locus_tag=ACYKK2_000101;product=molecular chaperone DnaK;protein_id=HIH2230792.1;transl_table=11 DBLQKW010000001.1 tpg gene 100088 100618 . - . ID=gene-ACYKK2_000102;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=ACYKK2_000102 DBLQKW010000001.1 Protein Homology CDS 100088 100618 . - 0 ID=cds-HIH2230793.1;Parent=gene-ACYKK2_000102;Dbxref=NCBI_GP:HIH2230793.1;Name=HIH2230793.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344165.1;locus_tag=ACYKK2_000102;product=nucleotide exchange factor GrpE;protein_id=HIH2230793.1;transl_table=11 DBLQKW010000001.1 tpg gene 100615 101406 . - . ID=gene-ACYKK2_000103;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=ACYKK2_000103 DBLQKW010000001.1 Protein Homology CDS 100615 101406 . - 0 ID=cds-HIH2230794.1;Parent=gene-ACYKK2_000103;Dbxref=NCBI_GP:HIH2230794.1;Name=HIH2230794.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=hrcA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002807544.1;locus_tag=ACYKK2_000103;product=HrcA family transcriptional regulator;protein_id=HIH2230794.1;transl_table=11 DBLQKW010000001.1 tpg gene 101709 103811 . - . ID=gene-ACYKK2_000104;Name=cfrA;gbkey=Gene;gene=cfrA;gene_biotype=protein_coding;locus_tag=ACYKK2_000104 DBLQKW010000001.1 Protein Homology CDS 101709 103811 . - 0 ID=cds-HIH2230795.1;Parent=gene-ACYKK2_000104;Dbxref=NCBI_GP:HIH2230795.1;Name=HIH2230795.1;Ontology_term=GO:0044718,GO:0015344;gbkey=CDS;gene=cfrA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA;go_process=siderophore transmembrane transport|0044718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344163.1;locus_tag=ACYKK2_000104;product=TonB-dependent ferric enterobactin receptor CfrA;protein_id=HIH2230795.1;transl_table=11 ##sequence-region DBLQKW010000002.1 1 96756 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000002.1 tpg region 1 96756 . + . ID=DBLQKW010000002.1:1..96756;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000002.1 tpg gene 1 817 . - . ID=gene-ACYKK2_000105;Name=ACYKK2_000105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000105;partial=true;start_range=.,1 DBLQKW010000002.1 Protein Homology CDS 1 817 . - 0 ID=cds-HIH2230796.1;Parent=gene-ACYKK2_000105;Dbxref=NCBI_GP:HIH2230796.1;Name=HIH2230796.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014517064.1;locus_tag=ACYKK2_000105;partial=true;product=glycosyltransferase family 2 protein;protein_id=HIH2230796.1;start_range=.,1;transl_table=11 DBLQKW010000002.1 tpg gene 876 1835 . + . ID=gene-ACYKK2_000106;Name=waaF;gbkey=Gene;gene=waaF;gene_biotype=protein_coding;locus_tag=ACYKK2_000106 DBLQKW010000002.1 Protein Homology CDS 876 1835 . + 0 ID=cds-HIH2230797.1;Parent=gene-ACYKK2_000106;Dbxref=NCBI_GP:HIH2230797.1;Name=HIH2230797.1;Ontology_term=GO:0009103,GO:0008920,GO:0016757;gbkey=CDS;gene=waaF;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA,glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002874233.1;locus_tag=ACYKK2_000106;product=lipopolysaccharide heptosyltransferase II;protein_id=HIH2230797.1;transl_table=11 DBLQKW010000002.1 tpg gene 1816 2376 . - . ID=gene-ACYKK2_000107;Name=gmhA;gbkey=Gene;gene=gmhA;gene_biotype=protein_coding;locus_tag=ACYKK2_000107 DBLQKW010000002.1 Protein Homology CDS 1816 2376 . - 0 ID=cds-HIH2230798.1;Parent=gene-ACYKK2_000107;Dbxref=NCBI_GP:HIH2230798.1;Name=HIH2230798.1;Ontology_term=GO:0009244,GO:0008968;gbkey=CDS;gene=gmhA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344540.1;locus_tag=ACYKK2_000107;product=D-sedoheptulose 7-phosphate isomerase;protein_id=HIH2230798.1;transl_table=11 DBLQKW010000002.1 tpg gene 2373 3758 . - . ID=gene-ACYKK2_000108;Name=rfaE1;gbkey=Gene;gene=rfaE1;gene_biotype=protein_coding;locus_tag=ACYKK2_000108 DBLQKW010000002.1 Protein Homology CDS 2373 3758 . - 0 ID=cds-HIH2230799.1;Parent=gene-ACYKK2_000108;Dbxref=NCBI_GP:HIH2230799.1;Name=HIH2230799.1;Ontology_term=GO:0005975,GO:0016773,GO:0016779;gbkey=CDS;gene=rfaE1;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA,nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012661208.1;locus_tag=ACYKK2_000108;product=D-glycero-beta-D-manno-heptose-7-phosphate kinase;protein_id=HIH2230799.1;transl_table=11 DBLQKW010000002.1 tpg gene 3751 4704 . - . ID=gene-ACYKK2_000109;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=ACYKK2_000109 DBLQKW010000002.1 Protein Homology CDS 3751 4704 . - 0 ID=cds-HIH2230800.1;Parent=gene-ACYKK2_000109;Dbxref=NCBI_GP:HIH2230800.1;Name=HIH2230800.1;Ontology_term=GO:0005975,GO:0009244,GO:0008712,GO:0050661;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA,NADP binding|0050661||IEA;go_process=carbohydrate metabolic process|0005975||IEA,lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344542.1;locus_tag=ACYKK2_000109;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=HIH2230800.1;transl_table=11 DBLQKW010000002.1 tpg pseudogene 4705 5266 . - . ID=gene-ACYKK2_000110;Name=ACYKK2_000110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_000110;pseudo=true DBLQKW010000002.1 Protein Homology CDS 4705 5266 . - 0 ID=cds-ACYKK2_000110;Parent=gene-ACYKK2_000110;Note=frameshifted;Ontology_term=GO:0034200,GO:0046872;gbkey=CDS;go_function=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase activity|0034200||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344543.1;locus_tag=ACYKK2_000110;product=D-glycero-alpha-D-manno-heptose-1%2C7-bisphosphate 7-phosphatase;pseudo=true;transl_table=11 DBLQKW010000002.1 tpg gene 5347 5649 . + . ID=gene-ACYKK2_000111;Name=ACYKK2_000111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000111 DBLQKW010000002.1 Protein Homology CDS 5347 5649 . + 0 ID=cds-HIH2230801.1;Parent=gene-ACYKK2_000111;Dbxref=NCBI_GP:HIH2230801.1;Name=HIH2230801.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344544.1;locus_tag=ACYKK2_000111;product=c-type cytochrome;protein_id=HIH2230801.1;transl_table=11 DBLQKW010000002.1 tpg gene 5672 5878 . - . ID=gene-ACYKK2_000112;Name=ccoS;gbkey=Gene;gene=ccoS;gene_biotype=protein_coding;locus_tag=ACYKK2_000112 DBLQKW010000002.1 Protein Homology CDS 5672 5878 . - 0 ID=cds-HIH2230802.1;Parent=gene-ACYKK2_000112;Dbxref=NCBI_GP:HIH2230802.1;Name=HIH2230802.1;Ontology_term=GO:0008535;gbkey=CDS;gene=ccoS;go_process=respiratory chain complex IV assembly|0008535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344545.1;locus_tag=ACYKK2_000112;product=cbb3-type cytochrome oxidase assembly protein CcoS;protein_id=HIH2230802.1;transl_table=11 DBLQKW010000002.1 tpg gene 5875 8232 . - . ID=gene-ACYKK2_000113;Name=ACYKK2_000113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000113 DBLQKW010000002.1 Protein Homology CDS 5875 8232 . - 0 ID=cds-HIH2230803.1;Parent=gene-ACYKK2_000113;Dbxref=NCBI_GP:HIH2230803.1;Name=HIH2230803.1;Ontology_term=GO:0006812,GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0042626,GO:0046872,GO:0140358,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,P-type transmembrane transporter activity|0140358||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344546.1;locus_tag=ACYKK2_000113;product=heavy metal translocating P-type ATPase;protein_id=HIH2230803.1;transl_table=11 DBLQKW010000002.1 tpg gene 8341 9639 . + . ID=gene-ACYKK2_000114;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=ACYKK2_000114 DBLQKW010000002.1 Protein Homology CDS 8341 9639 . + 0 ID=cds-HIH2230804.1;Parent=gene-ACYKK2_000114;Dbxref=NCBI_GP:HIH2230804.1;Name=HIH2230804.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344547.1;locus_tag=ACYKK2_000114;product=transcription termination factor Rho;protein_id=HIH2230804.1;transl_table=11 DBLQKW010000002.1 tpg gene 9643 11172 . + . ID=gene-ACYKK2_000115;Name=ACYKK2_000115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000115 DBLQKW010000002.1 Protein Homology CDS 9643 11172 . + 0 ID=cds-HIH2230805.1;Parent=gene-ACYKK2_000115;Dbxref=NCBI_GP:HIH2230805.1;Name=HIH2230805.1;Ontology_term=GO:0006260,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344548.1;locus_tag=ACYKK2_000115;product=DNA polymerase III subunit gamma/tau;protein_id=HIH2230805.1;transl_table=11 DBLQKW010000002.1 tpg pseudogene 11169 11479 . - . ID=gene-ACYKK2_000116;Name=ACYKK2_000116;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_000116;pseudo=true DBLQKW010000002.1 Protein Homology CDS 11169 11479 . - 0 ID=cds-ACYKK2_000116;Parent=gene-ACYKK2_000116;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021453.6;locus_tag=ACYKK2_000116;product=DUF2165 family protein;pseudo=true;transl_table=11 DBLQKW010000002.1 tpg gene 11511 11690 . - . ID=gene-ACYKK2_000117;Name=ACYKK2_000117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000117 DBLQKW010000002.1 Protein Homology CDS 11511 11690 . - 0 ID=cds-HIH2230806.1;Parent=gene-ACYKK2_000117;Dbxref=NCBI_GP:HIH2230806.1;Name=HIH2230806.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021453.6;locus_tag=ACYKK2_000117;product=DUF2165 family protein;protein_id=HIH2230806.1;transl_table=11 DBLQKW010000002.1 tpg gene 11762 13861 . - . ID=gene-ACYKK2_000118;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=ACYKK2_000118 DBLQKW010000002.1 Protein Homology CDS 11762 13861 . - 0 ID=cds-HIH2230807.1;Parent=gene-ACYKK2_000118;Dbxref=NCBI_GP:HIH2230807.1;Name=HIH2230807.1;gbkey=CDS;gene=copA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344552.1;locus_tag=ACYKK2_000118;product=copper-translocating P-type ATPase CopA;protein_id=HIH2230807.1;transl_table=11 DBLQKW010000002.1 tpg gene 13861 14055 . - . ID=gene-ACYKK2_000119;Name=ACYKK2_000119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000119 DBLQKW010000002.1 Protein Homology CDS 13861 14055 . - 0 ID=cds-HIH2230808.1;Parent=gene-ACYKK2_000119;Dbxref=NCBI_GP:HIH2230808.1;Name=HIH2230808.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344553.1;locus_tag=ACYKK2_000119;product=heavy-metal-associated domain-containing protein;protein_id=HIH2230808.1;transl_table=11 DBLQKW010000002.1 tpg gene 14045 14995 . - . ID=gene-ACYKK2_000120;Name=czcD;gbkey=Gene;gene=czcD;gene_biotype=protein_coding;locus_tag=ACYKK2_000120 DBLQKW010000002.1 Protein Homology CDS 14045 14995 . - 0 ID=cds-HIH2230809.1;Parent=gene-ACYKK2_000120;Dbxref=NCBI_GP:HIH2230809.1;Name=HIH2230809.1;gbkey=CDS;gene=czcD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344554.1;locus_tag=ACYKK2_000120;product=CDF family cation-efflux transporter CzcD;protein_id=HIH2230809.1;transl_table=11 DBLQKW010000002.1 tpg gene 15070 15333 . - . ID=gene-ACYKK2_000121;Name=ACYKK2_000121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000121 DBLQKW010000002.1 Protein Homology CDS 15070 15333 . - 0 ID=cds-HIH2230810.1;Parent=gene-ACYKK2_000121;Dbxref=NCBI_GP:HIH2230810.1;Name=HIH2230810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344555.1;locus_tag=ACYKK2_000121;product=zf-TFIIB domain-containing protein;protein_id=HIH2230810.1;transl_table=11 DBLQKW010000002.1 tpg gene 15404 15898 . - . ID=gene-ACYKK2_000122;Name=ACYKK2_000122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000122 DBLQKW010000002.1 Protein Homology CDS 15404 15898 . - 0 ID=cds-HIH2230811.1;Parent=gene-ACYKK2_000122;Dbxref=NCBI_GP:HIH2230811.1;Name=HIH2230811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344556.1;locus_tag=ACYKK2_000122;product=threonine/serine exporter family protein;protein_id=HIH2230811.1;transl_table=11 DBLQKW010000002.1 tpg gene 15895 16671 . - . ID=gene-ACYKK2_000123;Name=ACYKK2_000123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000123 DBLQKW010000002.1 Protein Homology CDS 15895 16671 . - 0 ID=cds-HIH2230812.1;Parent=gene-ACYKK2_000123;Dbxref=NCBI_GP:HIH2230812.1;Name=HIH2230812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344557.1;locus_tag=ACYKK2_000123;product=threonine/serine exporter family protein;protein_id=HIH2230812.1;transl_table=11 DBLQKW010000002.1 tpg gene 16738 17664 . + . ID=gene-ACYKK2_000124;Name=ACYKK2_000124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000124 DBLQKW010000002.1 Protein Homology CDS 16738 17664 . + 0 ID=cds-HIH2230813.1;Parent=gene-ACYKK2_000124;Dbxref=NCBI_GP:HIH2230813.1;Name=HIH2230813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344558.1;locus_tag=ACYKK2_000124;product=L-lactate dehydrogenase;protein_id=HIH2230813.1;transl_table=11 DBLQKW010000002.1 tpg gene 17661 18263 . - . ID=gene-ACYKK2_000125;Name=ACYKK2_000125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000125 DBLQKW010000002.1 Protein Homology CDS 17661 18263 . - 0 ID=cds-HIH2230814.1;Parent=gene-ACYKK2_000125;Dbxref=NCBI_GP:HIH2230814.1;Name=HIH2230814.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344559.1;locus_tag=ACYKK2_000125;product=DedA family protein;protein_id=HIH2230814.1;transl_table=11 DBLQKW010000002.1 tpg gene 18344 18571 . - . ID=gene-ACYKK2_000126;Name=ACYKK2_000126;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000126 DBLQKW010000002.1 Protein Homology CDS 18344 18571 . - 0 ID=cds-HIH2230815.1;Parent=gene-ACYKK2_000126;Dbxref=NCBI_GP:HIH2230815.1;Name=HIH2230815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344560.1;locus_tag=ACYKK2_000126;product=hypothetical protein;protein_id=HIH2230815.1;transl_table=11 DBLQKW010000002.1 tpg gene 18582 20033 . - . ID=gene-ACYKK2_000127;Name=omp50;gbkey=Gene;gene=omp50;gene_biotype=protein_coding;locus_tag=ACYKK2_000127 DBLQKW010000002.1 Protein Homology CDS 18582 20033 . - 0 ID=cds-HIH2230816.1;Parent=gene-ACYKK2_000127;Dbxref=NCBI_GP:HIH2230816.1;Name=HIH2230816.1;gbkey=CDS;gene=omp50;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344561.1;locus_tag=ACYKK2_000127;product=outer membrane tyrosine kinase;protein_id=HIH2230816.1;transl_table=11 DBLQKW010000002.1 tpg gene 20186 20668 . - . ID=gene-ACYKK2_000128;Name=ACYKK2_000128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000128 DBLQKW010000002.1 Protein Homology CDS 20186 20668 . - 0 ID=cds-HIH2230817.1;Parent=gene-ACYKK2_000128;Dbxref=NCBI_GP:HIH2230817.1;Name=HIH2230817.1;Ontology_term=GO:0000413,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein peptidyl-prolyl isomerization|0000413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344562.1;locus_tag=ACYKK2_000128;product=peptidylprolyl isomerase;protein_id=HIH2230817.1;transl_table=11 DBLQKW010000002.1 tpg gene 20678 21385 . - . ID=gene-ACYKK2_000129;Name=ACYKK2_000129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000129 DBLQKW010000002.1 Protein Homology CDS 20678 21385 . - 0 ID=cds-HIH2230818.1;Parent=gene-ACYKK2_000129;Dbxref=NCBI_GP:HIH2230818.1;Name=HIH2230818.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344563.1;locus_tag=ACYKK2_000129;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=HIH2230818.1;transl_table=11 DBLQKW010000002.1 tpg gene 21494 21835 . + . ID=gene-ACYKK2_000130;Name=ACYKK2_000130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000130 DBLQKW010000002.1 Protein Homology CDS 21494 21835 . + 0 ID=cds-HIH2230819.1;Parent=gene-ACYKK2_000130;Dbxref=NCBI_GP:HIH2230819.1;Name=HIH2230819.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344564.1;locus_tag=ACYKK2_000130;product=DMT family transporter;protein_id=HIH2230819.1;transl_table=11 DBLQKW010000002.1 tpg gene 21835 22143 . + . ID=gene-ACYKK2_000131;Name=ACYKK2_000131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000131 DBLQKW010000002.1 Protein Homology CDS 21835 22143 . + 0 ID=cds-HIH2230820.1;Parent=gene-ACYKK2_000131;Dbxref=NCBI_GP:HIH2230820.1;Name=HIH2230820.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344565.1;locus_tag=ACYKK2_000131;product=DMT family transporter;protein_id=HIH2230820.1;transl_table=11 DBLQKW010000002.1 tpg gene 22161 23753 . - . ID=gene-ACYKK2_000132;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=ACYKK2_000132 DBLQKW010000002.1 Protein Homology CDS 22161 23753 . - 0 ID=cds-HIH2230821.1;Parent=gene-ACYKK2_000132;Dbxref=NCBI_GP:HIH2230821.1;Name=HIH2230821.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344566.1;locus_tag=ACYKK2_000132;product=arginine--tRNA ligase;protein_id=HIH2230821.1;transl_table=11 DBLQKW010000002.1 tpg gene 23765 24004 . - . ID=gene-ACYKK2_000133;Name=ACYKK2_000133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000133 DBLQKW010000002.1 Protein Homology CDS 23765 24004 . - 0 ID=cds-HIH2230822.1;Parent=gene-ACYKK2_000133;Dbxref=NCBI_GP:HIH2230822.1;Name=HIH2230822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344567.1;locus_tag=ACYKK2_000133;product=twin-arginine translocase TatA/TatE family subunit;protein_id=HIH2230822.1;transl_table=11 DBLQKW010000002.1 tpg gene 24006 24629 . - . ID=gene-ACYKK2_000134;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=ACYKK2_000134 DBLQKW010000002.1 Protein Homology CDS 24006 24629 . - 0 ID=cds-HIH2230823.1;Parent=gene-ACYKK2_000134;Dbxref=NCBI_GP:HIH2230823.1;Name=HIH2230823.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344568.1;locus_tag=ACYKK2_000134;product=guanylate kinase;protein_id=HIH2230823.1;transl_table=11 DBLQKW010000002.1 tpg gene 24626 26233 . - . ID=gene-ACYKK2_000135;Name=ACYKK2_000135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000135 DBLQKW010000002.1 Protein Homology CDS 24626 26233 . - 0 ID=cds-HIH2230824.1;Parent=gene-ACYKK2_000135;Dbxref=NCBI_GP:HIH2230824.1;Name=HIH2230824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344569.1;locus_tag=ACYKK2_000135;product=highly acidic protein;protein_id=HIH2230824.1;transl_table=11 DBLQKW010000002.1 tpg gene 26290 27057 . - . ID=gene-ACYKK2_000136;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=ACYKK2_000136 DBLQKW010000002.1 Protein Homology CDS 26290 27057 . - 0 ID=cds-HIH2230825.1;Parent=gene-ACYKK2_000136;Dbxref=NCBI_GP:HIH2230825.1;Name=HIH2230825.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002871684.1;locus_tag=ACYKK2_000136;product=flagellar biosynthetic protein FliR;protein_id=HIH2230825.1;transl_table=11 DBLQKW010000002.1 tpg gene 27044 27679 . - . ID=gene-ACYKK2_000137;Name=ACYKK2_000137;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000137 DBLQKW010000002.1 Protein Homology CDS 27044 27679 . - 0 ID=cds-HIH2230826.1;Parent=gene-ACYKK2_000137;Dbxref=NCBI_GP:HIH2230826.1;Name=HIH2230826.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344571.1;locus_tag=ACYKK2_000137;product=ABC transporter ATP-binding protein;protein_id=HIH2230826.1;transl_table=11 DBLQKW010000002.1 tpg gene 27692 28765 . - . ID=gene-ACYKK2_000138;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=ACYKK2_000138 DBLQKW010000002.1 Protein Homology CDS 27692 28765 . - 0 ID=cds-HIH2230827.1;Parent=gene-ACYKK2_000138;Dbxref=NCBI_GP:HIH2230827.1;Name=HIH2230827.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344572.1;locus_tag=ACYKK2_000138;product=translation elongation factor Ts;protein_id=HIH2230827.1;transl_table=11 DBLQKW010000002.1 tpg gene 28765 29556 . - . ID=gene-ACYKK2_000139;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=ACYKK2_000139 DBLQKW010000002.1 Protein Homology CDS 28765 29556 . - 0 ID=cds-HIH2230828.1;Parent=gene-ACYKK2_000139;Dbxref=NCBI_GP:HIH2230828.1;Name=HIH2230828.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344573.1;locus_tag=ACYKK2_000139;product=30S ribosomal protein S2;protein_id=HIH2230828.1;transl_table=11 DBLQKW010000002.1 tpg gene 29672 30835 . - . ID=gene-ACYKK2_000140;Name=ACYKK2_000140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000140 DBLQKW010000002.1 Protein Homology CDS 29672 30835 . - 0 ID=cds-HIH2230829.1;Parent=gene-ACYKK2_000140;Dbxref=NCBI_GP:HIH2230829.1;Name=HIH2230829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344574.1;locus_tag=ACYKK2_000140;product=class I SAM-dependent methyltransferase;protein_id=HIH2230829.1;transl_table=11 DBLQKW010000002.1 tpg gene 30963 32087 . - . ID=gene-ACYKK2_000141;Name=ACYKK2_000141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000141 DBLQKW010000002.1 Protein Homology CDS 30963 32087 . - 0 ID=cds-HIH2230830.1;Parent=gene-ACYKK2_000141;Dbxref=NCBI_GP:HIH2230830.1;Name=HIH2230830.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344575.1;locus_tag=ACYKK2_000141;product=c-type cytochrome;protein_id=HIH2230830.1;transl_table=11 DBLQKW010000002.1 tpg gene 32084 33334 . - . ID=gene-ACYKK2_000142;Name=ACYKK2_000142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000142 DBLQKW010000002.1 Protein Homology CDS 32084 33334 . - 0 ID=cds-HIH2230831.1;Parent=gene-ACYKK2_000142;Dbxref=NCBI_GP:HIH2230831.1;Name=HIH2230831.1;Ontology_term=GO:0022904,GO:0008121,GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=ubiquinol-cytochrome-c reductase activity|0008121||IEA,electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344576.1;locus_tag=ACYKK2_000142;product=cytochrome b;protein_id=HIH2230831.1;transl_table=11 DBLQKW010000002.1 tpg gene 33336 33839 . - . ID=gene-ACYKK2_000143;Name=petA;gbkey=Gene;gene=petA;gene_biotype=protein_coding;locus_tag=ACYKK2_000143 DBLQKW010000002.1 Protein Homology CDS 33336 33839 . - 0 ID=cds-HIH2230832.1;Parent=gene-ACYKK2_000143;Dbxref=NCBI_GP:HIH2230832.1;Name=HIH2230832.1;Ontology_term=GO:0009060,GO:0008121,GO:0009055,GO:0045275;gbkey=CDS;gene=petA;go_component=respiratory chain complex III|0045275||IEA;go_function=ubiquinol-cytochrome-c reductase activity|0008121||IEA,electron transfer activity|0009055||IEA;go_process=aerobic respiration|0009060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344577.1;locus_tag=ACYKK2_000143;product=ubiquinol-cytochrome c reductase iron-sulfur subunit;protein_id=HIH2230832.1;transl_table=11 DBLQKW010000002.1 tpg gene 33930 35216 . - . ID=gene-ACYKK2_000144;Name=ACYKK2_000144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000144 DBLQKW010000002.1 Protein Homology CDS 33930 35216 . - 0 ID=cds-HIH2230833.1;Parent=gene-ACYKK2_000144;Dbxref=NCBI_GP:HIH2230833.1;Name=HIH2230833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344578.1;locus_tag=ACYKK2_000144;product=arsenic transporter;protein_id=HIH2230833.1;transl_table=11 DBLQKW010000002.1 tpg gene 35217 37076 . - . ID=gene-ACYKK2_000145;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=ACYKK2_000145 DBLQKW010000002.1 Protein Homology CDS 35217 37076 . - 0 ID=cds-HIH2230834.1;Parent=gene-ACYKK2_000145;Dbxref=NCBI_GP:HIH2230834.1;Name=HIH2230834.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344579.1;locus_tag=ACYKK2_000145;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=HIH2230834.1;transl_table=11 DBLQKW010000002.1 tpg gene 37164 37661 . - . ID=gene-ACYKK2_000146;Name=cetB;gbkey=Gene;gene=cetB;gene_biotype=protein_coding;locus_tag=ACYKK2_000146 DBLQKW010000002.1 Protein Homology CDS 37164 37661 . - 0 ID=cds-HIH2230835.1;Parent=gene-ACYKK2_000146;Dbxref=NCBI_GP:HIH2230835.1;Name=HIH2230835.1;gbkey=CDS;gene=cetB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344580.1;locus_tag=ACYKK2_000146;product=bipartate energy taxis response protein CetB;protein_id=HIH2230835.1;transl_table=11 DBLQKW010000002.1 tpg gene 37679 39058 . - . ID=gene-ACYKK2_000147;Name=cetA;gbkey=Gene;gene=cetA;gene_biotype=protein_coding;locus_tag=ACYKK2_000147 DBLQKW010000002.1 Protein Homology CDS 37679 39058 . - 0 ID=cds-HIH2230836.1;Parent=gene-ACYKK2_000147;Dbxref=NCBI_GP:HIH2230836.1;Name=HIH2230836.1;gbkey=CDS;gene=cetA;inference=COORDINATES: protein motif:HMM:NF012245.6;locus_tag=ACYKK2_000147;product=bipartate energy taxis response protein CetA;protein_id=HIH2230836.1;transl_table=11 DBLQKW010000002.1 tpg gene 39178 39672 . - . ID=gene-ACYKK2_000148;Name=cetC;gbkey=Gene;gene=cetC;gene_biotype=protein_coding;locus_tag=ACYKK2_000148 DBLQKW010000002.1 Protein Homology CDS 39178 39672 . - 0 ID=cds-HIH2230837.1;Parent=gene-ACYKK2_000148;Dbxref=NCBI_GP:HIH2230837.1;Name=HIH2230837.1;gbkey=CDS;gene=cetC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344582.1;locus_tag=ACYKK2_000148;product=energy taxis response protein CetC;protein_id=HIH2230837.1;transl_table=11 DBLQKW010000002.1 tpg gene 39941 41317 . + . ID=gene-ACYKK2_000149;Name=ACYKK2_000149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000149 DBLQKW010000002.1 Protein Homology CDS 39941 41317 . + 0 ID=cds-HIH2230838.1;Parent=gene-ACYKK2_000149;Dbxref=NCBI_GP:HIH2230838.1;Name=HIH2230838.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344583.1;locus_tag=ACYKK2_000149;product=cation:dicarboxylate symporter family transporter;protein_id=HIH2230838.1;transl_table=11 DBLQKW010000002.1 tpg gene 41314 42120 . - . ID=gene-ACYKK2_000150;Name=ACYKK2_000150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000150 DBLQKW010000002.1 Protein Homology CDS 41314 42120 . - 0 ID=cds-HIH2230839.1;Parent=gene-ACYKK2_000150;Dbxref=NCBI_GP:HIH2230839.1;Name=HIH2230839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344584.1;locus_tag=ACYKK2_000150;product=inverse autotransporter beta domain-containing protein;protein_id=HIH2230839.1;transl_table=11 DBLQKW010000002.1 tpg gene 42262 43788 . + . ID=gene-ACYKK2_000151;Name=ACYKK2_000151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000151 DBLQKW010000002.1 Protein Homology CDS 42262 43788 . + 0 ID=cds-HIH2230840.1;Parent=gene-ACYKK2_000151;Dbxref=NCBI_GP:HIH2230840.1;Name=HIH2230840.1;Ontology_term=GO:0006817,GO:0005315,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344585.1;locus_tag=ACYKK2_000151;product=inorganic phosphate transporter;protein_id=HIH2230840.1;transl_table=11 DBLQKW010000002.1 tpg gene 43796 44974 . - . ID=gene-ACYKK2_000152;Name=ACYKK2_000152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000152 DBLQKW010000002.1 Protein Homology CDS 43796 44974 . - 0 ID=cds-HIH2230841.1;Parent=gene-ACYKK2_000152;Dbxref=NCBI_GP:HIH2230841.1;Name=HIH2230841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344586.1;locus_tag=ACYKK2_000152;product=metal-dependent hydrolase;protein_id=HIH2230841.1;transl_table=11 DBLQKW010000002.1 tpg gene 44984 45880 . - . ID=gene-ACYKK2_000153;Name=ACYKK2_000153;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000153 DBLQKW010000002.1 Protein Homology CDS 44984 45880 . - 0 ID=cds-HIH2230842.1;Parent=gene-ACYKK2_000153;Dbxref=NCBI_GP:HIH2230842.1;Name=HIH2230842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344587.1;locus_tag=ACYKK2_000153;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=HIH2230842.1;transl_table=11 DBLQKW010000002.1 tpg gene 45877 47295 . - . ID=gene-ACYKK2_000154;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=ACYKK2_000154 DBLQKW010000002.1 Protein Homology CDS 45877 47295 . - 0 ID=cds-HIH2230843.1;Parent=gene-ACYKK2_000154;Dbxref=NCBI_GP:HIH2230843.1;Name=HIH2230843.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344588.1;locus_tag=ACYKK2_000154;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=HIH2230843.1;transl_table=11 DBLQKW010000002.1 tpg gene 47410 47904 . + . ID=gene-ACYKK2_000155;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=ACYKK2_000155 DBLQKW010000002.1 Protein Homology CDS 47410 47904 . + 0 ID=cds-HIH2230844.1;Parent=gene-ACYKK2_000155;Dbxref=NCBI_GP:HIH2230844.1;Name=HIH2230844.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344589.1;locus_tag=ACYKK2_000155;product=S-ribosylhomocysteine lyase;protein_id=HIH2230844.1;transl_table=11 DBLQKW010000002.1 tpg gene 48215 49207 . + . ID=gene-ACYKK2_000156;Name=ACYKK2_000156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000156 DBLQKW010000002.1 Protein Homology CDS 48215 49207 . + 0 ID=cds-HIH2230845.1;Parent=gene-ACYKK2_000156;Dbxref=NCBI_GP:HIH2230845.1;Name=HIH2230845.1;Ontology_term=GO:0005506,GO:0046872,GO:0051213;gbkey=CDS;go_function=iron ion binding|0005506||IEA,metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344590.1;locus_tag=ACYKK2_000156;product=isopenicillin N synthase family dioxygenase;protein_id=HIH2230845.1;transl_table=11 DBLQKW010000002.1 tpg gene 49218 49988 . + . ID=gene-ACYKK2_000157;Name=ACYKK2_000157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000157 DBLQKW010000002.1 Protein Homology CDS 49218 49988 . + 0 ID=cds-HIH2230846.1;Parent=gene-ACYKK2_000157;Dbxref=NCBI_GP:HIH2230846.1;Name=HIH2230846.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002855781.1;locus_tag=ACYKK2_000157;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=HIH2230846.1;transl_table=11 DBLQKW010000002.1 tpg gene 50000 52264 . + . ID=gene-ACYKK2_000158;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=ACYKK2_000158 DBLQKW010000002.1 Protein Homology CDS 50000 52264 . + 0 ID=cds-HIH2230847.1;Parent=gene-ACYKK2_000158;Dbxref=NCBI_GP:HIH2230847.1;Name=HIH2230847.1;Ontology_term=GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344592.1;locus_tag=ACYKK2_000158;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=HIH2230847.1;transl_table=11 DBLQKW010000002.1 tpg gene 52274 53122 . + . ID=gene-ACYKK2_000159;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=ACYKK2_000159 DBLQKW010000002.1 Protein Homology CDS 52274 53122 . + 0 ID=cds-HIH2230848.1;Parent=gene-ACYKK2_000159;Dbxref=NCBI_GP:HIH2230848.1;Name=HIH2230848.1;Ontology_term=GO:0009086,GO:0004489,GO:0005829;gbkey=CDS;gene=metF;go_component=cytosol|0005829||IEA;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344593.1;locus_tag=ACYKK2_000159;product=methylenetetrahydrofolate reductase [NAD(P)H];protein_id=HIH2230848.1;transl_table=11 DBLQKW010000002.1 tpg gene 53144 53335 . - . ID=gene-ACYKK2_000160;Name=ACYKK2_000160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000160 DBLQKW010000002.1 Protein Homology CDS 53144 53335 . - 0 ID=cds-HIH2230849.1;Parent=gene-ACYKK2_000160;Dbxref=NCBI_GP:HIH2230849.1;Name=HIH2230849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344594.1;locus_tag=ACYKK2_000160;product=hypothetical protein;protein_id=HIH2230849.1;transl_table=11 DBLQKW010000002.1 tpg gene 53332 54012 . - . ID=gene-ACYKK2_000161;Name=ACYKK2_000161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000161 DBLQKW010000002.1 Protein Homology CDS 53332 54012 . - 0 ID=cds-HIH2230850.1;Parent=gene-ACYKK2_000161;Dbxref=NCBI_GP:HIH2230850.1;Name=HIH2230850.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344595.1;locus_tag=ACYKK2_000161;product=F0F1 ATP synthase subunit A;protein_id=HIH2230850.1;transl_table=11 DBLQKW010000002.1 tpg gene 54081 55421 . - . ID=gene-ACYKK2_000162;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=ACYKK2_000162 DBLQKW010000002.1 Protein Homology CDS 54081 55421 . - 0 ID=cds-HIH2230851.1;Parent=gene-ACYKK2_000162;Dbxref=NCBI_GP:HIH2230851.1;Name=HIH2230851.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344596.1;locus_tag=ACYKK2_000162;product=DNA repair protein RadA;protein_id=HIH2230851.1;transl_table=11 DBLQKW010000002.1 tpg gene 55421 56287 . - . ID=gene-ACYKK2_000163;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=ACYKK2_000163 DBLQKW010000002.1 Protein Homology CDS 55421 56287 . - 0 ID=cds-HIH2230852.1;Parent=gene-ACYKK2_000163;Dbxref=NCBI_GP:HIH2230852.1;Name=HIH2230852.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344597.1;locus_tag=ACYKK2_000163;product=signal recognition particle-docking protein FtsY;protein_id=HIH2230852.1;transl_table=11 DBLQKW010000002.1 tpg gene 56287 56844 . - . ID=gene-ACYKK2_000164;Name=ACYKK2_000164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000164 DBLQKW010000002.1 Protein Homology CDS 56287 56844 . - 0 ID=cds-HIH2230853.1;Parent=gene-ACYKK2_000164;Dbxref=NCBI_GP:HIH2230853.1;Name=HIH2230853.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344598.1;locus_tag=ACYKK2_000164;product=TlpA family protein disulfide reductase;protein_id=HIH2230853.1;transl_table=11 DBLQKW010000002.1 tpg gene 56927 57553 . + . ID=gene-ACYKK2_000165;Name=ACYKK2_000165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000165 DBLQKW010000002.1 Protein Homology CDS 56927 57553 . + 0 ID=cds-HIH2230854.1;Parent=gene-ACYKK2_000165;Dbxref=NCBI_GP:HIH2230854.1;Name=HIH2230854.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344599.1;locus_tag=ACYKK2_000165;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=HIH2230854.1;transl_table=11 DBLQKW010000002.1 tpg gene 57474 59027 . + . ID=gene-ACYKK2_000166;Name=rny;gbkey=Gene;gene=rny;gene_biotype=protein_coding;locus_tag=ACYKK2_000166 DBLQKW010000002.1 Protein Homology CDS 57474 59027 . + 0 ID=cds-HIH2230855.1;Parent=gene-ACYKK2_000166;Dbxref=NCBI_GP:HIH2230855.1;Name=HIH2230855.1;Ontology_term=GO:0006402,GO:0003723,GO:0016020;gbkey=CDS;gene=rny;go_component=membrane|0016020||IEA;go_function=RNA binding|0003723||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344600.1;locus_tag=ACYKK2_000166;product=ribonuclease Y;protein_id=HIH2230855.1;transl_table=11 DBLQKW010000002.1 tpg gene 59036 59593 . + . ID=gene-ACYKK2_000167;Name=ACYKK2_000167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000167 DBLQKW010000002.1 Protein Homology CDS 59036 59593 . + 0 ID=cds-HIH2230856.1;Parent=gene-ACYKK2_000167;Dbxref=NCBI_GP:HIH2230856.1;Name=HIH2230856.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344601.1;locus_tag=ACYKK2_000167;product=DedA family protein;protein_id=HIH2230856.1;transl_table=11 DBLQKW010000002.1 tpg gene 59593 60852 . + . ID=gene-ACYKK2_000168;Name=ACYKK2_000168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000168 DBLQKW010000002.1 Protein Homology CDS 59593 60852 . + 0 ID=cds-HIH2230857.1;Parent=gene-ACYKK2_000168;Dbxref=NCBI_GP:HIH2230857.1;Name=HIH2230857.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344602.1;locus_tag=ACYKK2_000168;product=ComEC/Rec2 family competence protein;protein_id=HIH2230857.1;transl_table=11 DBLQKW010000002.1 tpg gene 60796 61602 . - . ID=gene-ACYKK2_000169;Name=ACYKK2_000169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000169 DBLQKW010000002.1 Protein Homology CDS 60796 61602 . - 0 ID=cds-HIH2230858.1;Parent=gene-ACYKK2_000169;Dbxref=NCBI_GP:HIH2230858.1;Name=HIH2230858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344603.1;locus_tag=ACYKK2_000169;product=YihY/virulence factor BrkB family protein;protein_id=HIH2230858.1;transl_table=11 DBLQKW010000002.1 tpg gene 61606 62988 . - . ID=gene-ACYKK2_000170;Name=ACYKK2_000170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000170 DBLQKW010000002.1 Protein Homology CDS 61606 62988 . - 0 ID=cds-HIH2230859.1;Parent=gene-ACYKK2_000170;Dbxref=NCBI_GP:HIH2230859.1;Name=HIH2230859.1;Ontology_term=GO:0003824,GO:0050660;gbkey=CDS;go_function=catalytic activity|0003824||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344604.1;locus_tag=ACYKK2_000170;product=FAD-linked oxidase C-terminal domain-containing protein;protein_id=HIH2230859.1;transl_table=11 DBLQKW010000002.1 tpg gene 62991 63716 . - . ID=gene-ACYKK2_000171;Name=ACYKK2_000171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000171 DBLQKW010000002.1 Protein Homology CDS 62991 63716 . - 0 ID=cds-HIH2230860.1;Parent=gene-ACYKK2_000171;Dbxref=NCBI_GP:HIH2230860.1;Name=HIH2230860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344605.1;locus_tag=ACYKK2_000171;product=plasminogen-binding N-terminal domain-containing protein;protein_id=HIH2230860.1;transl_table=11 DBLQKW010000002.1 tpg gene 63838 64998 . + . ID=gene-ACYKK2_000172;Name=ACYKK2_000172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000172 DBLQKW010000002.1 Protein Homology CDS 63838 64998 . + 0 ID=cds-HIH2230861.1;Parent=gene-ACYKK2_000172;Dbxref=NCBI_GP:HIH2230861.1;Name=HIH2230861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344606.1;locus_tag=ACYKK2_000172;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=HIH2230861.1;transl_table=11 DBLQKW010000002.1 tpg gene 64995 65198 . - . ID=gene-ACYKK2_000173;Name=ACYKK2_000173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000173 DBLQKW010000002.1 Protein Homology CDS 64995 65198 . - 0 ID=cds-HIH2230862.1;Parent=gene-ACYKK2_000173;Dbxref=NCBI_GP:HIH2230862.1;Name=HIH2230862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344607.1;locus_tag=ACYKK2_000173;product=hypothetical protein;protein_id=HIH2230862.1;transl_table=11 DBLQKW010000002.1 tpg gene 65200 65880 . - . ID=gene-ACYKK2_000174;Name=ACYKK2_000174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000174 DBLQKW010000002.1 Protein Homology CDS 65200 65880 . - 0 ID=cds-HIH2230863.1;Parent=gene-ACYKK2_000174;Dbxref=NCBI_GP:HIH2230863.1;Name=HIH2230863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344608.1;locus_tag=ACYKK2_000174;product=polyphenol oxidase family protein;protein_id=HIH2230863.1;transl_table=11 DBLQKW010000002.1 tpg gene 65844 66455 . - . ID=gene-ACYKK2_000175;Name=ACYKK2_000175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000175 DBLQKW010000002.1 Protein Homology CDS 65844 66455 . - 0 ID=cds-HIH2230864.1;Parent=gene-ACYKK2_000175;Dbxref=NCBI_GP:HIH2230864.1;Name=HIH2230864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344609.1;locus_tag=ACYKK2_000175;product=riboflavin synthase;protein_id=HIH2230864.1;transl_table=11 DBLQKW010000002.1 tpg gene 66464 69004 . - . ID=gene-ACYKK2_000176;Name=ACYKK2_000176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000176 DBLQKW010000002.1 Protein Homology CDS 66464 69004 . - 0 ID=cds-HIH2230865.1;Parent=gene-ACYKK2_000176;Dbxref=NCBI_GP:HIH2230865.1;Name=HIH2230865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344610.1;locus_tag=ACYKK2_000176;product=hypothetical protein;protein_id=HIH2230865.1;transl_table=11 DBLQKW010000002.1 tpg gene 69166 69426 . + . ID=gene-ACYKK2_000177;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=ACYKK2_000177 DBLQKW010000002.1 Protein Homology CDS 69166 69426 . + 0 ID=cds-HIH2230866.1;Parent=gene-ACYKK2_000177;Dbxref=NCBI_GP:HIH2230866.1;Name=HIH2230866.1;gbkey=CDS;gene=groES;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344611.1;locus_tag=ACYKK2_000177;product=co-chaperone GroES;protein_id=HIH2230866.1;transl_table=11 DBLQKW010000002.1 tpg gene 69448 71085 . + . ID=gene-ACYKK2_000178;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=ACYKK2_000178 DBLQKW010000002.1 Protein Homology CDS 69448 71085 . + 0 ID=cds-HIH2230867.1;Parent=gene-ACYKK2_000178;Dbxref=NCBI_GP:HIH2230867.1;Name=HIH2230867.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344612.1;locus_tag=ACYKK2_000178;product=chaperonin GroEL;protein_id=HIH2230867.1;transl_table=11 DBLQKW010000002.1 tpg gene 71128 72318 . - . ID=gene-ACYKK2_000179;Name=dccS;gbkey=Gene;gene=dccS;gene_biotype=protein_coding;locus_tag=ACYKK2_000179 DBLQKW010000002.1 Protein Homology CDS 71128 72318 . - 0 ID=cds-HIH2230868.1;Parent=gene-ACYKK2_000179;Dbxref=NCBI_GP:HIH2230868.1;Name=HIH2230868.1;gbkey=CDS;gene=dccS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344613.1;locus_tag=ACYKK2_000179;product=two-component system sensor histidine kinase DccS;protein_id=HIH2230868.1;transl_table=11 DBLQKW010000002.1 tpg gene 72311 72976 . - . ID=gene-ACYKK2_000180;Name=dccR;gbkey=Gene;gene=dccR;gene_biotype=protein_coding;locus_tag=ACYKK2_000180 DBLQKW010000002.1 Protein Homology CDS 72311 72976 . - 0 ID=cds-HIH2230869.1;Parent=gene-ACYKK2_000180;Dbxref=NCBI_GP:HIH2230869.1;Name=HIH2230869.1;gbkey=CDS;gene=dccR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344614.1;locus_tag=ACYKK2_000180;product=two-component system response regulator DccR;protein_id=HIH2230869.1;transl_table=11 DBLQKW010000002.1 tpg gene 73124 73723 . + . ID=gene-ACYKK2_000181;Name=ACYKK2_000181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000181 DBLQKW010000002.1 Protein Homology CDS 73124 73723 . + 0 ID=cds-HIH2230870.1;Parent=gene-ACYKK2_000181;Dbxref=NCBI_GP:HIH2230870.1;Name=HIH2230870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344615.1;locus_tag=ACYKK2_000181;product=bacteriohemerythrin;protein_id=HIH2230870.1;transl_table=11 DBLQKW010000002.1 tpg gene 73734 73982 . + . ID=gene-ACYKK2_000182;Name=ACYKK2_000182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000182 DBLQKW010000002.1 Protein Homology CDS 73734 73982 . + 0 ID=cds-HIH2230871.1;Parent=gene-ACYKK2_000182;Dbxref=NCBI_GP:HIH2230871.1;Name=HIH2230871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344616.1;locus_tag=ACYKK2_000182;product=ribbon-helix-helix domain-containing protein;protein_id=HIH2230871.1;transl_table=11 DBLQKW010000002.1 tpg gene 74074 74148 . - . ID=gene-ACYKK2_000183;Name=ACYKK2_000183;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_000183 DBLQKW010000002.1 tRNAscan-SE tRNA 74074 74148 . - . ID=rna-ACYKK2_000183;Parent=gene-ACYKK2_000183;anticodon=(pos:complement(74114..74116));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_000183;product=tRNA-Asn DBLQKW010000002.1 tRNAscan-SE exon 74074 74148 . - . ID=exon-ACYKK2_000183-1;Parent=rna-ACYKK2_000183;anticodon=(pos:complement(74114..74116));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_000183;product=tRNA-Asn DBLQKW010000002.1 tpg gene 74241 75488 . - . ID=gene-ACYKK2_000184;Name=ACYKK2_000184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000184 DBLQKW010000002.1 Protein Homology CDS 74241 75488 . - 0 ID=cds-HIH2230872.1;Parent=gene-ACYKK2_000184;Dbxref=NCBI_GP:HIH2230872.1;Name=HIH2230872.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344617.1;locus_tag=ACYKK2_000184;product=ArsS family sensor histidine kinase;protein_id=HIH2230872.1;transl_table=11 DBLQKW010000002.1 tpg gene 75485 76159 . - . ID=gene-ACYKK2_000185;Name=ACYKK2_000185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000185 DBLQKW010000002.1 Protein Homology CDS 75485 76159 . - 0 ID=cds-HIH2230873.1;Parent=gene-ACYKK2_000185;Dbxref=NCBI_GP:HIH2230873.1;Name=HIH2230873.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344618.1;locus_tag=ACYKK2_000185;product=response regulator transcription factor;protein_id=HIH2230873.1;transl_table=11 DBLQKW010000002.1 tpg gene 76235 77653 . - . ID=gene-ACYKK2_000186;Name=htrA;gbkey=Gene;gene=htrA;gene_biotype=protein_coding;locus_tag=ACYKK2_000186 DBLQKW010000002.1 Protein Homology CDS 76235 77653 . - 0 ID=cds-HIH2230874.1;Parent=gene-ACYKK2_000186;Dbxref=NCBI_GP:HIH2230874.1;Name=HIH2230874.1;gbkey=CDS;gene=htrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344619.1;locus_tag=ACYKK2_000186;product=serine protease HtrA;protein_id=HIH2230874.1;transl_table=11 DBLQKW010000002.1 tpg gene 77854 78747 . + . ID=gene-ACYKK2_000187;Name=ACYKK2_000187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000187 DBLQKW010000002.1 Protein Homology CDS 77854 78747 . + 0 ID=cds-HIH2230875.1;Parent=gene-ACYKK2_000187;Dbxref=NCBI_GP:HIH2230875.1;Name=HIH2230875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344620.1;locus_tag=ACYKK2_000187;product=DnaJ family protein;protein_id=HIH2230875.1;transl_table=11 DBLQKW010000002.1 tpg gene 78763 79137 . + . ID=gene-ACYKK2_000188;Name=ACYKK2_000188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000188 DBLQKW010000002.1 Protein Homology CDS 78763 79137 . + 0 ID=cds-HIH2230876.1;Parent=gene-ACYKK2_000188;Dbxref=NCBI_GP:HIH2230876.1;Name=HIH2230876.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344621.1;locus_tag=ACYKK2_000188;product=heat shock protein transcriptional repressor HspR;protein_id=HIH2230876.1;transl_table=11 DBLQKW010000002.1 tpg gene 79144 80769 . + . ID=gene-ACYKK2_000189;Name=ACYKK2_000189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000189 DBLQKW010000002.1 Protein Homology CDS 79144 80769 . + 0 ID=cds-HIH2230877.1;Parent=gene-ACYKK2_000189;Dbxref=NCBI_GP:HIH2230877.1;Name=HIH2230877.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344622.1;locus_tag=ACYKK2_000189;product=cation:proton antiporter;protein_id=HIH2230877.1;transl_table=11 DBLQKW010000002.1 tpg gene 80779 81111 . + . ID=gene-ACYKK2_000190;Name=ACYKK2_000190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000190 DBLQKW010000002.1 Protein Homology CDS 80779 81111 . + 0 ID=cds-HIH2230878.1;Parent=gene-ACYKK2_000190;Dbxref=NCBI_GP:HIH2230878.1;Name=HIH2230878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344623.1;locus_tag=ACYKK2_000190;product=hypothetical protein;protein_id=HIH2230878.1;transl_table=11 DBLQKW010000002.1 tpg gene 81108 81728 . + . ID=gene-ACYKK2_000191;Name=ACYKK2_000191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000191 DBLQKW010000002.1 Protein Homology CDS 81108 81728 . + 0 ID=cds-HIH2230879.1;Parent=gene-ACYKK2_000191;Dbxref=NCBI_GP:HIH2230879.1;Name=HIH2230879.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344624.1;locus_tag=ACYKK2_000191;product=HAD family hydrolase;protein_id=HIH2230879.1;transl_table=11 DBLQKW010000002.1 tpg gene 81784 83778 . + . ID=gene-ACYKK2_000192;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=ACYKK2_000192 DBLQKW010000002.1 Protein Homology CDS 81784 83778 . + 0 ID=cds-HIH2230880.1;Parent=gene-ACYKK2_000192;Dbxref=NCBI_GP:HIH2230880.1;Name=HIH2230880.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344625.1;locus_tag=ACYKK2_000192;product=glycine--tRNA ligase subunit beta;protein_id=HIH2230880.1;transl_table=11 DBLQKW010000002.1 tpg gene 83775 84596 . + . ID=gene-ACYKK2_000193;Name=ACYKK2_000193;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000193 DBLQKW010000002.1 Protein Homology CDS 83775 84596 . + 0 ID=cds-HIH2230881.1;Parent=gene-ACYKK2_000193;Dbxref=NCBI_GP:HIH2230881.1;Name=HIH2230881.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344626.1;locus_tag=ACYKK2_000193;product=M23 family metallopeptidase;protein_id=HIH2230881.1;transl_table=11 DBLQKW010000002.1 tpg gene 84593 85543 . + . ID=gene-ACYKK2_000194;Name=ACYKK2_000194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000194 DBLQKW010000002.1 Protein Homology CDS 84593 85543 . + 0 ID=cds-HIH2230882.1;Parent=gene-ACYKK2_000194;Dbxref=NCBI_GP:HIH2230882.1;Name=HIH2230882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344627.1;locus_tag=ACYKK2_000194;product=SAM-dependent methyltransferase;protein_id=HIH2230882.1;transl_table=11 DBLQKW010000002.1 tpg gene 85540 86514 . - . ID=gene-ACYKK2_000195;Name=ACYKK2_000195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000195 DBLQKW010000002.1 Protein Homology CDS 85540 86514 . - 0 ID=cds-HIH2230883.1;Parent=gene-ACYKK2_000195;Dbxref=NCBI_GP:HIH2230883.1;Name=HIH2230883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344628.1;locus_tag=ACYKK2_000195;product=Ppx/GppA family phosphatase;protein_id=HIH2230883.1;transl_table=11 DBLQKW010000002.1 tpg gene 86570 87343 . + . ID=gene-ACYKK2_000196;Name=ACYKK2_000196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000196 DBLQKW010000002.1 Protein Homology CDS 86570 87343 . + 0 ID=cds-HIH2230884.1;Parent=gene-ACYKK2_000196;Dbxref=NCBI_GP:HIH2230884.1;Name=HIH2230884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344629.1;locus_tag=ACYKK2_000196;product=pyridoxine 5'-phosphate synthase;protein_id=HIH2230884.1;transl_table=11 DBLQKW010000002.1 tpg gene 87340 88434 . + . ID=gene-ACYKK2_000197;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=ACYKK2_000197 DBLQKW010000002.1 Protein Homology CDS 87340 88434 . + 0 ID=cds-HIH2230885.1;Parent=gene-ACYKK2_000197;Dbxref=NCBI_GP:HIH2230885.1;Name=HIH2230885.1;Ontology_term=GO:0051287;gbkey=CDS;gene=pdxA;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344630.1;locus_tag=ACYKK2_000197;product=4-hydroxythreonine-4-phosphate dehydrogenase;protein_id=HIH2230885.1;transl_table=11 DBLQKW010000002.1 tpg gene 88424 89026 . - . ID=gene-ACYKK2_000198;Name=ACYKK2_000198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000198 DBLQKW010000002.1 Protein Homology CDS 88424 89026 . - 0 ID=cds-HIH2230886.1;Parent=gene-ACYKK2_000198;Dbxref=NCBI_GP:HIH2230886.1;Name=HIH2230886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344631.1;locus_tag=ACYKK2_000198;product=hypothetical protein;protein_id=HIH2230886.1;transl_table=11 DBLQKW010000002.1 tpg gene 89145 90344 . + . ID=gene-ACYKK2_000199;Name=ACYKK2_000199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000199 DBLQKW010000002.1 Protein Homology CDS 89145 90344 . + 0 ID=cds-HIH2230887.1;Parent=gene-ACYKK2_000199;Dbxref=NCBI_GP:HIH2230887.1;Name=HIH2230887.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344632.1;locus_tag=ACYKK2_000199;product=MFS transporter;protein_id=HIH2230887.1;transl_table=11 DBLQKW010000002.1 tpg gene 90400 90720 . + . ID=gene-ACYKK2_000200;Name=ciaC;gbkey=Gene;gene=ciaC;gene_biotype=protein_coding;locus_tag=ACYKK2_000200 DBLQKW010000002.1 Protein Homology CDS 90400 90720 . + 0 ID=cds-HIH2230888.1;Parent=gene-ACYKK2_000200;Dbxref=NCBI_GP:HIH2230888.1;Name=HIH2230888.1;gbkey=CDS;gene=ciaC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344633.1;locus_tag=ACYKK2_000200;product=invasion antigen CiaC;protein_id=HIH2230888.1;transl_table=11 DBLQKW010000002.1 tpg gene 90904 91926 . + . ID=gene-ACYKK2_000201;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=ACYKK2_000201 DBLQKW010000002.1 Protein Homology CDS 90904 91926 . + 0 ID=cds-HIH2230889.1;Parent=gene-ACYKK2_000201;Dbxref=NCBI_GP:HIH2230889.1;Name=HIH2230889.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344634.1;locus_tag=ACYKK2_000201;product=uroporphyrinogen decarboxylase;protein_id=HIH2230889.1;transl_table=11 DBLQKW010000002.1 tpg gene 91923 92825 . + . ID=gene-ACYKK2_000202;Name=ACYKK2_000202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000202 DBLQKW010000002.1 Protein Homology CDS 91923 92825 . + 0 ID=cds-HIH2230890.1;Parent=gene-ACYKK2_000202;Dbxref=NCBI_GP:HIH2230890.1;Name=HIH2230890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344635.1;locus_tag=ACYKK2_000202;product=radical SAM protein;protein_id=HIH2230890.1;transl_table=11 DBLQKW010000002.1 tpg gene 92822 94018 . - . ID=gene-ACYKK2_000203;Name=ACYKK2_000203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000203 DBLQKW010000002.1 Protein Homology CDS 92822 94018 . - 0 ID=cds-HIH2230891.1;Parent=gene-ACYKK2_000203;Dbxref=NCBI_GP:HIH2230891.1;Name=HIH2230891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344636.1;locus_tag=ACYKK2_000203;product=hypothetical protein;protein_id=HIH2230891.1;transl_table=11 DBLQKW010000002.1 tpg gene 94020 95822 . - . ID=gene-ACYKK2_000204;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=ACYKK2_000204 DBLQKW010000002.1 Protein Homology CDS 94020 95822 . - 0 ID=cds-HIH2230892.1;Parent=gene-ACYKK2_000204;Dbxref=NCBI_GP:HIH2230892.1;Name=HIH2230892.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344637.1;locus_tag=ACYKK2_000204;product=excinuclease ABC subunit UvrC;protein_id=HIH2230892.1;transl_table=11 DBLQKW010000002.1 tpg gene 95815 96309 . - . ID=gene-ACYKK2_000205;Name=ACYKK2_000205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000205 DBLQKW010000002.1 Protein Homology CDS 95815 96309 . - 0 ID=cds-HIH2230893.1;Parent=gene-ACYKK2_000205;Dbxref=NCBI_GP:HIH2230893.1;Name=HIH2230893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344638.1;locus_tag=ACYKK2_000205;product=hypothetical protein;protein_id=HIH2230893.1;transl_table=11 DBLQKW010000002.1 tpg gene 96448 96756 . + . ID=gene-ACYKK2_000206;Name=ACYKK2_000206;end_range=96756,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000206;partial=true DBLQKW010000002.1 Protein Homology CDS 96448 96756 . + 0 ID=cds-HIH2230894.1;Parent=gene-ACYKK2_000206;Dbxref=NCBI_GP:HIH2230894.1;Name=HIH2230894.1;end_range=96756,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344639.1;locus_tag=ACYKK2_000206;partial=true;product=glutamine amidotransferase-related protein;protein_id=HIH2230894.1;transl_table=11 ##sequence-region DBLQKW010000003.1 1 80917 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000003.1 tpg region 1 80917 . + . ID=DBLQKW010000003.1:1..80917;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000003.1 tpg gene 30 1304 . + . ID=gene-ACYKK2_000207;Name=cmeD;gbkey=Gene;gene=cmeD;gene_biotype=protein_coding;locus_tag=ACYKK2_000207 DBLQKW010000003.1 Protein Homology CDS 30 1304 . + 0 ID=cds-HIH2230895.1;Parent=gene-ACYKK2_000207;Dbxref=NCBI_GP:HIH2230895.1;Name=HIH2230895.1;gbkey=CDS;gene=cmeD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344426.1;locus_tag=ACYKK2_000207;product=multidrug efflux RND transporter outer membrane subunit CmeD;protein_id=HIH2230895.1;transl_table=11 DBLQKW010000003.1 tpg gene 1301 2041 . + . ID=gene-ACYKK2_000208;Name=cmeE;gbkey=Gene;gene=cmeE;gene_biotype=protein_coding;locus_tag=ACYKK2_000208 DBLQKW010000003.1 Protein Homology CDS 1301 2041 . + 0 ID=cds-HIH2230896.1;Parent=gene-ACYKK2_000208;Dbxref=NCBI_GP:HIH2230896.1;Name=HIH2230896.1;gbkey=CDS;gene=cmeE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344427.1;locus_tag=ACYKK2_000208;product=multidrug efflux RND transporter periplasmic adaptor subunit CmeE;protein_id=HIH2230896.1;transl_table=11 DBLQKW010000003.1 tpg gene 2044 5061 . + . ID=gene-ACYKK2_000209;Name=cmeF;gbkey=Gene;gene=cmeF;gene_biotype=protein_coding;locus_tag=ACYKK2_000209 DBLQKW010000003.1 Protein Homology CDS 2044 5061 . + 0 ID=cds-HIH2230897.1;Parent=gene-ACYKK2_000209;Dbxref=NCBI_GP:HIH2230897.1;Name=HIH2230897.1;gbkey=CDS;gene=cmeF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344428.1;locus_tag=ACYKK2_000209;product=multidrug efflux RND transporter permease subunit CmeF;protein_id=HIH2230897.1;transl_table=11 DBLQKW010000003.1 tpg gene 5085 5891 . - . ID=gene-ACYKK2_000210;Name=ACYKK2_000210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000210 DBLQKW010000003.1 Protein Homology CDS 5085 5891 . - 0 ID=cds-HIH2230898.1;Parent=gene-ACYKK2_000210;Dbxref=NCBI_GP:HIH2230898.1;Name=HIH2230898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344429.1;locus_tag=ACYKK2_000210;product=adenylosuccinate lyase;protein_id=HIH2230898.1;transl_table=11 DBLQKW010000003.1 tpg gene 5892 6611 . - . ID=gene-ACYKK2_000211;Name=ACYKK2_000211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000211 DBLQKW010000003.1 Protein Homology CDS 5892 6611 . - 0 ID=cds-HIH2230899.1;Parent=gene-ACYKK2_000211;Dbxref=NCBI_GP:HIH2230899.1;Name=HIH2230899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344430.1;locus_tag=ACYKK2_000211;product=arginyltransferase;protein_id=HIH2230899.1;transl_table=11 DBLQKW010000003.1 tpg gene 6611 6862 . - . ID=gene-ACYKK2_000212;Name=ACYKK2_000212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000212 DBLQKW010000003.1 Protein Homology CDS 6611 6862 . - 0 ID=cds-HIH2230900.1;Parent=gene-ACYKK2_000212;Dbxref=NCBI_GP:HIH2230900.1;Name=HIH2230900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344431.1;locus_tag=ACYKK2_000212;product=hypothetical protein;protein_id=HIH2230900.1;transl_table=11 DBLQKW010000003.1 tpg gene 6866 8311 . - . ID=gene-ACYKK2_000213;Name=ACYKK2_000213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000213 DBLQKW010000003.1 Protein Homology CDS 6866 8311 . - 0 ID=cds-HIH2230901.1;Parent=gene-ACYKK2_000213;Dbxref=NCBI_GP:HIH2230901.1;Name=HIH2230901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344432.1;locus_tag=ACYKK2_000213;product=acetyl-CoA carboxylase subunit A;protein_id=HIH2230901.1;transl_table=11 DBLQKW010000003.1 tpg gene 8451 9614 . + . ID=gene-ACYKK2_000214;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=ACYKK2_000214 DBLQKW010000003.1 Protein Homology CDS 8451 9614 . + 0 ID=cds-HIH2230902.1;Parent=gene-ACYKK2_000214;Dbxref=NCBI_GP:HIH2230902.1;Name=HIH2230902.1;Ontology_term=GO:0009252,GO:0051301,GO:0016020;gbkey=CDS;gene=ftsW;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344433.1;locus_tag=ACYKK2_000214;product=putative lipid II flippase FtsW;protein_id=HIH2230902.1;transl_table=11 DBLQKW010000003.1 tpg gene 9611 10639 . + . ID=gene-ACYKK2_000215;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=ACYKK2_000215 DBLQKW010000003.1 Protein Homology CDS 9611 10639 . + 0 ID=cds-HIH2230903.1;Parent=gene-ACYKK2_000215;Dbxref=NCBI_GP:HIH2230903.1;Name=HIH2230903.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344434.1;locus_tag=ACYKK2_000215;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=HIH2230903.1;transl_table=11 DBLQKW010000003.1 tpg gene 10610 11773 . - . ID=gene-ACYKK2_000216;Name=ACYKK2_000216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000216 DBLQKW010000003.1 Protein Homology CDS 10610 11773 . - 0 ID=cds-HIH2230904.1;Parent=gene-ACYKK2_000216;Dbxref=NCBI_GP:HIH2230904.1;Name=HIH2230904.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344435.1;locus_tag=ACYKK2_000216;product=MFS transporter;protein_id=HIH2230904.1;transl_table=11 DBLQKW010000003.1 tpg gene 11781 12632 . - . ID=gene-ACYKK2_000217;Name=ACYKK2_000217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000217 DBLQKW010000003.1 Protein Homology CDS 11781 12632 . - 0 ID=cds-HIH2230905.1;Parent=gene-ACYKK2_000217;Dbxref=NCBI_GP:HIH2230905.1;Name=HIH2230905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344436.1;locus_tag=ACYKK2_000217;product=ATP-binding protein;protein_id=HIH2230905.1;transl_table=11 DBLQKW010000003.1 tpg gene 12695 13585 . - . ID=gene-ACYKK2_000218;Name=ACYKK2_000218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000218 DBLQKW010000003.1 Protein Homology CDS 12695 13585 . - 0 ID=cds-HIH2230906.1;Parent=gene-ACYKK2_000218;Dbxref=NCBI_GP:HIH2230906.1;Name=HIH2230906.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344437.1;locus_tag=ACYKK2_000218;product=helix-turn-helix domain-containing protein;protein_id=HIH2230906.1;transl_table=11 DBLQKW010000003.1 tpg gene 13582 14187 . - . ID=gene-ACYKK2_000219;Name=ACYKK2_000219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000219 DBLQKW010000003.1 Protein Homology CDS 13582 14187 . - 0 ID=cds-HIH2230907.1;Parent=gene-ACYKK2_000219;Dbxref=NCBI_GP:HIH2230907.1;Name=HIH2230907.1;Ontology_term=GO:0009228,GO:0009229,GO:0000287,GO:0004789;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA,thiamine diphosphate biosynthetic process|0009229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344438.1;locus_tag=ACYKK2_000219;product=thiamine phosphate synthase;protein_id=HIH2230907.1;transl_table=11 DBLQKW010000003.1 tpg gene 14177 15322 . - . ID=gene-ACYKK2_000220;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=ACYKK2_000220 DBLQKW010000003.1 Protein Homology CDS 14177 15322 . - 0 ID=cds-HIH2230908.1;Parent=gene-ACYKK2_000220;Dbxref=NCBI_GP:HIH2230908.1;Name=HIH2230908.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344439.1;locus_tag=ACYKK2_000220;product=2-iminoacetate synthase ThiH;protein_id=HIH2230908.1;transl_table=11 DBLQKW010000003.1 tpg gene 15325 16101 . - . ID=gene-ACYKK2_000221;Name=ACYKK2_000221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000221 DBLQKW010000003.1 Protein Homology CDS 15325 16101 . - 0 ID=cds-HIH2230909.1;Parent=gene-ACYKK2_000221;Dbxref=NCBI_GP:HIH2230909.1;Name=HIH2230909.1;Ontology_term=GO:1990107;gbkey=CDS;go_function=thiazole synthase activity|1990107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344440.1;locus_tag=ACYKK2_000221;product=thiazole synthase;protein_id=HIH2230909.1;transl_table=11 DBLQKW010000003.1 tpg gene 16104 16907 . - . ID=gene-ACYKK2_000222;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=ACYKK2_000222 DBLQKW010000003.1 Protein Homology CDS 16104 16907 . - 0 ID=cds-HIH2230910.1;Parent=gene-ACYKK2_000222;Dbxref=NCBI_GP:HIH2230910.1;Name=HIH2230910.1;Ontology_term=GO:0009228,GO:0016779;gbkey=CDS;gene=thiF;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344441.1;locus_tag=ACYKK2_000222;product=thiamine biosynthesis protein ThiF;protein_id=HIH2230910.1;transl_table=11 DBLQKW010000003.1 tpg gene 16904 17095 . - . ID=gene-ACYKK2_000223;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=ACYKK2_000223 DBLQKW010000003.1 Protein Homology CDS 16904 17095 . - 0 ID=cds-HIH2230911.1;Parent=gene-ACYKK2_000223;Dbxref=NCBI_GP:HIH2230911.1;Name=HIH2230911.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344442.1;locus_tag=ACYKK2_000223;product=sulfur carrier protein ThiS;protein_id=HIH2230911.1;transl_table=11 DBLQKW010000003.1 tpg gene 17105 18202 . - . ID=gene-ACYKK2_000224;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=ACYKK2_000224 DBLQKW010000003.1 Protein Homology CDS 17105 18202 . - 0 ID=cds-HIH2230912.1;Parent=gene-ACYKK2_000224;Dbxref=NCBI_GP:HIH2230912.1;Name=HIH2230912.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344443.1;locus_tag=ACYKK2_000224;product=succinyl-diaminopimelate desuccinylase;protein_id=HIH2230912.1;transl_table=11 DBLQKW010000003.1 tpg gene 18207 18806 . - . ID=gene-ACYKK2_000225;Name=ACYKK2_000225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000225 DBLQKW010000003.1 Protein Homology CDS 18207 18806 . - 0 ID=cds-HIH2230913.1;Parent=gene-ACYKK2_000225;Dbxref=NCBI_GP:HIH2230913.1;Name=HIH2230913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344444.1;locus_tag=ACYKK2_000225;product=LysE family translocator;protein_id=HIH2230913.1;transl_table=11 DBLQKW010000003.1 tpg gene 18799 19500 . - . ID=gene-ACYKK2_000226;Name=ACYKK2_000226;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000226 DBLQKW010000003.1 Protein Homology CDS 18799 19500 . - 0 ID=cds-HIH2230914.1;Parent=gene-ACYKK2_000226;Dbxref=NCBI_GP:HIH2230914.1;Name=HIH2230914.1;Ontology_term=GO:0008270,GO:0017136,GO:0046872,GO:0070403;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,histone deacetylase activity%2C NAD-dependent|0017136||IEA,metal ion binding|0046872||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344445.1;locus_tag=ACYKK2_000226;product=SIR2 family NAD-dependent protein deacylase;protein_id=HIH2230914.1;transl_table=11 DBLQKW010000003.1 tpg gene 19543 23382 . - . ID=gene-ACYKK2_000227;Name=ACYKK2_000227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000227 DBLQKW010000003.1 Protein Homology CDS 19543 23382 . - 0 ID=cds-HIH2230915.1;Parent=gene-ACYKK2_000227;Dbxref=NCBI_GP:HIH2230915.1;Name=HIH2230915.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014517037.1;locus_tag=ACYKK2_000227;product=restriction endonuclease subunit S;protein_id=HIH2230915.1;transl_table=11 DBLQKW010000003.1 tpg gene 23391 25601 . - . ID=gene-ACYKK2_000228;Name=ACYKK2_000228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000228 DBLQKW010000003.1 Protein Homology CDS 23391 25601 . - 0 ID=cds-HIH2230916.1;Parent=gene-ACYKK2_000228;Dbxref=NCBI_GP:HIH2230916.1;Name=HIH2230916.1;Ontology_term=GO:0006259,GO:0045910,GO:0004519,GO:0016887,GO:0030983;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=DNA metabolic process|0006259||IEA,negative regulation of DNA recombination|0045910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344447.1;locus_tag=ACYKK2_000228;product=endonuclease MutS2;protein_id=HIH2230916.1;transl_table=11 DBLQKW010000003.1 tpg gene 25591 25941 . - . ID=gene-ACYKK2_000229;Name=ACYKK2_000229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000229 DBLQKW010000003.1 Protein Homology CDS 25591 25941 . - 0 ID=cds-HIH2230917.1;Parent=gene-ACYKK2_000229;Dbxref=NCBI_GP:HIH2230917.1;Name=HIH2230917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344448.1;locus_tag=ACYKK2_000229;product=hypothetical protein;protein_id=HIH2230917.1;transl_table=11 DBLQKW010000003.1 tpg gene 25934 27232 . - . ID=gene-ACYKK2_000230;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=ACYKK2_000230 DBLQKW010000003.1 Protein Homology CDS 25934 27232 . - 0 ID=cds-HIH2230918.1;Parent=gene-ACYKK2_000230;Dbxref=NCBI_GP:HIH2230918.1;Name=HIH2230918.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344449.1;locus_tag=ACYKK2_000230;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=HIH2230918.1;transl_table=11 DBLQKW010000003.1 tpg gene 27296 29269 . - . ID=gene-ACYKK2_000231;Name=ACYKK2_000231;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000231 DBLQKW010000003.1 Protein Homology CDS 27296 29269 . - 0 ID=cds-HIH2230919.1;Parent=gene-ACYKK2_000231;Dbxref=NCBI_GP:HIH2230919.1;Name=HIH2230919.1;Ontology_term=GO:0070395;gbkey=CDS;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344450.1;locus_tag=ACYKK2_000231;product=LTA synthase family protein;protein_id=HIH2230919.1;transl_table=11 DBLQKW010000003.1 tpg gene 29281 30057 . - . ID=gene-ACYKK2_000232;Name=ACYKK2_000232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000232 DBLQKW010000003.1 Protein Homology CDS 29281 30057 . - 0 ID=cds-HIH2230920.1;Parent=gene-ACYKK2_000232;Dbxref=NCBI_GP:HIH2230920.1;Name=HIH2230920.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344451.1;locus_tag=ACYKK2_000232;product=carbon-nitrogen hydrolase family protein;protein_id=HIH2230920.1;transl_table=11 DBLQKW010000003.1 tpg gene 30050 30223 . - . ID=gene-ACYKK2_000233;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=ACYKK2_000233 DBLQKW010000003.1 Protein Homology CDS 30050 30223 . - 0 ID=cds-HIH2230921.1;Parent=gene-ACYKK2_000233;Dbxref=NCBI_GP:HIH2230921.1;Name=HIH2230921.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseB;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344452.1;locus_tag=ACYKK2_000233;product=exodeoxyribonuclease VII small subunit;protein_id=HIH2230921.1;transl_table=11 DBLQKW010000003.1 tpg gene 30220 31677 . - . ID=gene-ACYKK2_000234;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=ACYKK2_000234 DBLQKW010000003.1 Protein Homology CDS 30220 31677 . - 0 ID=cds-HIH2230922.1;Parent=gene-ACYKK2_000234;Dbxref=NCBI_GP:HIH2230922.1;Name=HIH2230922.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344453.1;locus_tag=ACYKK2_000234;product=IMP dehydrogenase;protein_id=HIH2230922.1;transl_table=11 DBLQKW010000003.1 tpg gene 31687 33048 . - . ID=gene-ACYKK2_000235;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=ACYKK2_000235 DBLQKW010000003.1 Protein Homology CDS 31687 33048 . - 0 ID=cds-HIH2230923.1;Parent=gene-ACYKK2_000235;Dbxref=NCBI_GP:HIH2230923.1;Name=HIH2230923.1;Ontology_term=GO:0006412,GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344454.1;locus_tag=ACYKK2_000235;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=HIH2230923.1;transl_table=11 DBLQKW010000003.1 tpg gene 33045 33155 . - . ID=gene-ACYKK2_000236;Name=ACYKK2_000236;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000236 DBLQKW010000003.1 Protein Homology CDS 33045 33155 . - 0 ID=cds-HIH2230924.1;Parent=gene-ACYKK2_000236;Dbxref=NCBI_GP:HIH2230924.1;Name=HIH2230924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344455.1;locus_tag=ACYKK2_000236;product=hypothetical protein;protein_id=HIH2230924.1;transl_table=11 DBLQKW010000003.1 tpg gene 33149 35902 . - . ID=gene-ACYKK2_000237;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=ACYKK2_000237 DBLQKW010000003.1 Protein Homology CDS 33149 35902 . - 0 ID=cds-HIH2230925.1;Parent=gene-ACYKK2_000237;Dbxref=NCBI_GP:HIH2230925.1;Name=HIH2230925.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344456.1;locus_tag=ACYKK2_000237;product=isoleucine--tRNA ligase;protein_id=HIH2230925.1;transl_table=11 DBLQKW010000003.1 tpg gene 36001 37089 . + . ID=gene-ACYKK2_000238;Name=ACYKK2_000238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000238 DBLQKW010000003.1 Protein Homology CDS 36001 37089 . + 0 ID=cds-HIH2230926.1;Parent=gene-ACYKK2_000238;Dbxref=NCBI_GP:HIH2230926.1;Name=HIH2230926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344457.1;locus_tag=ACYKK2_000238;product=CinA family protein;protein_id=HIH2230926.1;transl_table=11 DBLQKW010000003.1 tpg gene 37101 37526 . + . ID=gene-ACYKK2_000239;Name=ACYKK2_000239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000239 DBLQKW010000003.1 Protein Homology CDS 37101 37526 . + 0 ID=cds-HIH2230927.1;Parent=gene-ACYKK2_000239;Dbxref=NCBI_GP:HIH2230927.1;Name=HIH2230927.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344458.1;locus_tag=ACYKK2_000239;product=GNAT family N-acetyltransferase;protein_id=HIH2230927.1;transl_table=11 DBLQKW010000003.1 tpg gene 37590 38210 . + . ID=gene-ACYKK2_000240;Name=ACYKK2_000240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000240 DBLQKW010000003.1 Protein Homology CDS 37590 38210 . + 0 ID=cds-HIH2230928.1;Parent=gene-ACYKK2_000240;Dbxref=NCBI_GP:HIH2230928.1;Name=HIH2230928.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002805019.1;locus_tag=ACYKK2_000240;product=NAD(P)H-dependent oxidoreductase;protein_id=HIH2230928.1;transl_table=11 DBLQKW010000003.1 tpg gene 38210 38815 . + . ID=gene-ACYKK2_000241;Name=ACYKK2_000241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000241 DBLQKW010000003.1 Protein Homology CDS 38210 38815 . + 0 ID=cds-HIH2230929.1;Parent=gene-ACYKK2_000241;Dbxref=NCBI_GP:HIH2230929.1;Name=HIH2230929.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344459.1;locus_tag=ACYKK2_000241;product=NAD(P)H-dependent oxidoreductase;protein_id=HIH2230929.1;transl_table=11 DBLQKW010000003.1 tpg gene 38940 39476 . + . ID=gene-ACYKK2_000242;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=ACYKK2_000242 DBLQKW010000003.1 Protein Homology CDS 38940 39476 . + 0 ID=cds-HIH2230930.1;Parent=gene-ACYKK2_000242;Dbxref=NCBI_GP:HIH2230930.1;Name=HIH2230930.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344460.1;locus_tag=ACYKK2_000242;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=HIH2230930.1;transl_table=11 DBLQKW010000003.1 tpg gene 39473 40579 . + . ID=gene-ACYKK2_000243;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=ACYKK2_000243 DBLQKW010000003.1 Protein Homology CDS 39473 40579 . + 0 ID=cds-HIH2230931.1;Parent=gene-ACYKK2_000243;Dbxref=NCBI_GP:HIH2230931.1;Name=HIH2230931.1;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344461.1;locus_tag=ACYKK2_000243;product=RIP metalloprotease RseP;protein_id=HIH2230931.1;transl_table=11 DBLQKW010000003.1 tpg gene 40572 41438 . + . ID=gene-ACYKK2_000244;Name=ACYKK2_000244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000244 DBLQKW010000003.1 Protein Homology CDS 40572 41438 . + 0 ID=cds-HIH2230932.1;Parent=gene-ACYKK2_000244;Dbxref=NCBI_GP:HIH2230932.1;Name=HIH2230932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344462.1;locus_tag=ACYKK2_000244;product=VirK family antimicrobial peptide resistance protein;protein_id=HIH2230932.1;transl_table=11 DBLQKW010000003.1 tpg gene 41525 41902 . + . ID=gene-ACYKK2_000245;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=ACYKK2_000245 DBLQKW010000003.1 Protein Homology CDS 41525 41902 . + 0 ID=cds-HIH2230933.1;Parent=gene-ACYKK2_000245;Dbxref=NCBI_GP:HIH2230933.1;Name=HIH2230933.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344463.1;locus_tag=ACYKK2_000245;product=30S ribosomal protein S6;protein_id=HIH2230933.1;transl_table=11 DBLQKW010000003.1 tpg gene 41911 42462 . + . ID=gene-ACYKK2_000246;Name=ACYKK2_000246;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000246 DBLQKW010000003.1 Protein Homology CDS 41911 42462 . + 0 ID=cds-HIH2230934.1;Parent=gene-ACYKK2_000246;Dbxref=NCBI_GP:HIH2230934.1;Name=HIH2230934.1;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344464.1;locus_tag=ACYKK2_000246;product=single-stranded DNA-binding protein;protein_id=HIH2230934.1;transl_table=11 DBLQKW010000003.1 tpg gene 42473 42733 . + . ID=gene-ACYKK2_000247;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=ACYKK2_000247 DBLQKW010000003.1 Protein Homology CDS 42473 42733 . + 0 ID=cds-HIH2230935.1;Parent=gene-ACYKK2_000247;Dbxref=NCBI_GP:HIH2230935.1;Name=HIH2230935.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344465.1;locus_tag=ACYKK2_000247;product=30S ribosomal protein S18;protein_id=HIH2230935.1;transl_table=11 DBLQKW010000003.1 tpg gene 42793 45168 . - . ID=gene-ACYKK2_000248;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=ACYKK2_000248 DBLQKW010000003.1 Protein Homology CDS 42793 45168 . - 0 ID=cds-HIH2230936.1;Parent=gene-ACYKK2_000248;Dbxref=NCBI_GP:HIH2230936.1;Name=HIH2230936.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0016887;gbkey=CDS;gene=lon;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344466.1;locus_tag=ACYKK2_000248;product=endopeptidase La;protein_id=HIH2230936.1;transl_table=11 DBLQKW010000003.1 tpg gene 45185 45832 . - . ID=gene-ACYKK2_000249;Name=ACYKK2_000249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000249 DBLQKW010000003.1 Protein Homology CDS 45185 45832 . - 0 ID=cds-HIH2230937.1;Parent=gene-ACYKK2_000249;Dbxref=NCBI_GP:HIH2230937.1;Name=HIH2230937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344467.1;locus_tag=ACYKK2_000249;product=outer membrane protein assembly factor BamD;protein_id=HIH2230937.1;transl_table=11 DBLQKW010000003.1 tpg gene 45993 46382 . + . ID=gene-ACYKK2_000250;Name=fliW;gbkey=Gene;gene=fliW;gene_biotype=protein_coding;locus_tag=ACYKK2_000250 DBLQKW010000003.1 Protein Homology CDS 45993 46382 . + 0 ID=cds-HIH2230938.1;Parent=gene-ACYKK2_000250;Dbxref=NCBI_GP:HIH2230938.1;Name=HIH2230938.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliW;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344468.1;locus_tag=ACYKK2_000250;product=flagellar assembly protein FliW;protein_id=HIH2230938.1;transl_table=11 DBLQKW010000003.1 tpg gene 46382 47116 . + . ID=gene-ACYKK2_000251;Name=ACYKK2_000251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000251 DBLQKW010000003.1 Protein Homology CDS 46382 47116 . + 0 ID=cds-HIH2230939.1;Parent=gene-ACYKK2_000251;Dbxref=NCBI_GP:HIH2230939.1;Name=HIH2230939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344469.1;locus_tag=ACYKK2_000251;product=pyrroline-5-carboxylate reductase;protein_id=HIH2230939.1;transl_table=11 DBLQKW010000003.1 tpg gene 47113 47415 . + . ID=gene-ACYKK2_000252;Name=ACYKK2_000252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000252 DBLQKW010000003.1 GeneMarkS-2+ CDS 47113 47415 . + 0 ID=cds-HIH2230940.1;Parent=gene-ACYKK2_000252;Dbxref=NCBI_GP:HIH2230940.1;Name=HIH2230940.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_000252;product=hypothetical protein;protein_id=HIH2230940.1;transl_table=11 DBLQKW010000003.1 tpg gene 47412 48074 . + . ID=gene-ACYKK2_000253;Name=ACYKK2_000253;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000253 DBLQKW010000003.1 Protein Homology CDS 47412 48074 . + 0 ID=cds-HIH2230941.1;Parent=gene-ACYKK2_000253;Dbxref=NCBI_GP:HIH2230941.1;Name=HIH2230941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344471.1;locus_tag=ACYKK2_000253;product=hypothetical protein;protein_id=HIH2230941.1;transl_table=11 DBLQKW010000003.1 tpg gene 48071 48523 . + . ID=gene-ACYKK2_000254;Name=ACYKK2_000254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000254 DBLQKW010000003.1 Protein Homology CDS 48071 48523 . + 0 ID=cds-HIH2230942.1;Parent=gene-ACYKK2_000254;Dbxref=NCBI_GP:HIH2230942.1;Name=HIH2230942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344472.1;locus_tag=ACYKK2_000254;product=hypothetical protein;protein_id=HIH2230942.1;transl_table=11 DBLQKW010000003.1 tpg gene 48520 49149 . - . ID=gene-ACYKK2_000255;Name=ACYKK2_000255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000255 DBLQKW010000003.1 Protein Homology CDS 48520 49149 . - 0 ID=cds-HIH2230943.1;Parent=gene-ACYKK2_000255;Dbxref=NCBI_GP:HIH2230943.1;Name=HIH2230943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344473.1;locus_tag=ACYKK2_000255;product=uroporphyrinogen-III synthase;protein_id=HIH2230943.1;transl_table=11 DBLQKW010000003.1 tpg gene 49127 49759 . - . ID=gene-ACYKK2_000256;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=ACYKK2_000256 DBLQKW010000003.1 Protein Homology CDS 49127 49759 . - 0 ID=cds-HIH2230944.1;Parent=gene-ACYKK2_000256;Dbxref=NCBI_GP:HIH2230944.1;Name=HIH2230944.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344474.1;locus_tag=ACYKK2_000256;product=thiamine phosphate synthase;protein_id=HIH2230944.1;transl_table=11 DBLQKW010000003.1 tpg gene 49749 50561 . - . ID=gene-ACYKK2_000257;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=ACYKK2_000257 DBLQKW010000003.1 Protein Homology CDS 49749 50561 . - 0 ID=cds-HIH2230945.1;Parent=gene-ACYKK2_000257;Dbxref=NCBI_GP:HIH2230945.1;Name=HIH2230945.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344475.1;locus_tag=ACYKK2_000257;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=HIH2230945.1;transl_table=11 DBLQKW010000003.1 tpg gene 50558 51244 . - . ID=gene-ACYKK2_000258;Name=ACYKK2_000258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000258 DBLQKW010000003.1 Protein Homology CDS 50558 51244 . - 0 ID=cds-HIH2230946.1;Parent=gene-ACYKK2_000258;Dbxref=NCBI_GP:HIH2230946.1;Name=HIH2230946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344476.1;locus_tag=ACYKK2_000258;product=endonuclease III domain-containing protein;protein_id=HIH2230946.1;transl_table=11 DBLQKW010000003.1 tpg gene 51241 52002 . - . ID=gene-ACYKK2_000259;Name=ACYKK2_000259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000259 DBLQKW010000003.1 Protein Homology CDS 51241 52002 . - 0 ID=cds-HIH2230947.1;Parent=gene-ACYKK2_000259;Dbxref=NCBI_GP:HIH2230947.1;Name=HIH2230947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344477.1;locus_tag=ACYKK2_000259;product=ATP-binding protein;protein_id=HIH2230947.1;transl_table=11 DBLQKW010000003.1 tpg gene 52004 54940 . - . ID=gene-ACYKK2_000260;Name=ACYKK2_000260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000260 DBLQKW010000003.1 Protein Homology CDS 52004 54940 . - 0 ID=cds-HIH2230948.1;Parent=gene-ACYKK2_000260;Dbxref=NCBI_GP:HIH2230948.1;Name=HIH2230948.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344478.1;locus_tag=ACYKK2_000260;product=DEAD/DEAH box helicase;protein_id=HIH2230948.1;transl_table=11 DBLQKW010000003.1 tpg gene 54940 55335 . - . ID=gene-ACYKK2_000261;Name=ACYKK2_000261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000261 DBLQKW010000003.1 Protein Homology CDS 54940 55335 . - 0 ID=cds-HIH2230949.1;Parent=gene-ACYKK2_000261;Dbxref=NCBI_GP:HIH2230949.1;Name=HIH2230949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344479.1;locus_tag=ACYKK2_000261;product=bactofilin family protein;protein_id=HIH2230949.1;transl_table=11 DBLQKW010000003.1 tpg gene 55272 56174 . - . ID=gene-ACYKK2_000262;Name=ACYKK2_000262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000262 DBLQKW010000003.1 Protein Homology CDS 55272 56174 . - 0 ID=cds-HIH2230950.1;Parent=gene-ACYKK2_000262;Dbxref=NCBI_GP:HIH2230950.1;Name=HIH2230950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344480.1;locus_tag=ACYKK2_000262;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=HIH2230950.1;transl_table=11 DBLQKW010000003.1 tpg gene 56161 57345 . - . ID=gene-ACYKK2_000263;Name=ACYKK2_000263;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000263 DBLQKW010000003.1 Protein Homology CDS 56161 57345 . - 0 ID=cds-HIH2230951.1;Parent=gene-ACYKK2_000263;Dbxref=NCBI_GP:HIH2230951.1;Name=HIH2230951.1;Ontology_term=GO:0006730,GO:0004326,GO:0005524,GO:0008841,GO:0046872;gbkey=CDS;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,dihydrofolate synthase activity|0008841||IEA,metal ion binding|0046872||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344481.1;locus_tag=ACYKK2_000263;product=folylpolyglutamate synthase/dihydrofolate synthase family protein;protein_id=HIH2230951.1;transl_table=11 DBLQKW010000003.1 tpg gene 57311 58708 . - . ID=gene-ACYKK2_000264;Name=ACYKK2_000264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000264 DBLQKW010000003.1 Protein Homology CDS 57311 58708 . - 0 ID=cds-HIH2230952.1;Parent=gene-ACYKK2_000264;Dbxref=NCBI_GP:HIH2230952.1;Name=HIH2230952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344482.1;locus_tag=ACYKK2_000264;product=hypothetical protein;protein_id=HIH2230952.1;transl_table=11 DBLQKW010000003.1 tpg gene 58692 59204 . - . ID=gene-ACYKK2_000265;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=ACYKK2_000265 DBLQKW010000003.1 Protein Homology CDS 58692 59204 . - 0 ID=cds-HIH2230953.1;Parent=gene-ACYKK2_000265;Dbxref=NCBI_GP:HIH2230953.1;Name=HIH2230953.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344483.1;locus_tag=ACYKK2_000265;product=LPS assembly lipoprotein LptE;protein_id=HIH2230953.1;transl_table=11 DBLQKW010000003.1 tpg gene 59201 61630 . - . ID=gene-ACYKK2_000266;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=ACYKK2_000266 DBLQKW010000003.1 Protein Homology CDS 59201 61630 . - 0 ID=cds-HIH2230954.1;Parent=gene-ACYKK2_000266;Dbxref=NCBI_GP:HIH2230954.1;Name=HIH2230954.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344484.1;locus_tag=ACYKK2_000266;product=leucine--tRNA ligase;protein_id=HIH2230954.1;transl_table=11 DBLQKW010000003.1 tpg gene 61640 62611 . - . ID=gene-ACYKK2_000267;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=ACYKK2_000267 DBLQKW010000003.1 Protein Homology CDS 61640 62611 . - 0 ID=cds-HIH2230955.1;Parent=gene-ACYKK2_000267;Dbxref=NCBI_GP:HIH2230955.1;Name=HIH2230955.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344485.1;locus_tag=ACYKK2_000267;product=protein translocase subunit SecF;protein_id=HIH2230955.1;transl_table=11 DBLQKW010000003.1 tpg gene 62611 64191 . - . ID=gene-ACYKK2_000268;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=ACYKK2_000268 DBLQKW010000003.1 Protein Homology CDS 62611 64191 . - 0 ID=cds-HIH2230956.1;Parent=gene-ACYKK2_000268;Dbxref=NCBI_GP:HIH2230956.1;Name=HIH2230956.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344486.1;locus_tag=ACYKK2_000268;product=protein translocase subunit SecD;protein_id=HIH2230956.1;transl_table=11 DBLQKW010000003.1 tpg gene 64184 64456 . - . ID=gene-ACYKK2_000269;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=ACYKK2_000269 DBLQKW010000003.1 Protein Homology CDS 64184 64456 . - 0 ID=cds-HIH2230957.1;Parent=gene-ACYKK2_000269;Dbxref=NCBI_GP:HIH2230957.1;Name=HIH2230957.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344487.1;locus_tag=ACYKK2_000269;product=preprotein translocase subunit YajC;protein_id=HIH2230957.1;transl_table=11 DBLQKW010000003.1 tpg gene 64429 65754 . + . ID=gene-ACYKK2_000270;Name=ACYKK2_000270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000270 DBLQKW010000003.1 Protein Homology CDS 64429 65754 . + 0 ID=cds-HIH2230958.1;Parent=gene-ACYKK2_000270;Dbxref=NCBI_GP:HIH2230958.1;Name=HIH2230958.1;Ontology_term=GO:0008152,GO:0016410;gbkey=CDS;go_function=N-acyltransferase activity|0016410||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344488.1;locus_tag=ACYKK2_000270;product=apolipoprotein N-acyltransferase;protein_id=HIH2230958.1;transl_table=11 DBLQKW010000003.1 tpg gene 65991 67187 . - . ID=gene-ACYKK2_000271;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=ACYKK2_000271 DBLQKW010000003.1 Protein Homology CDS 65991 67187 . - 0 ID=cds-HIH2230959.1;Parent=gene-ACYKK2_000271;Dbxref=NCBI_GP:HIH2230959.1;Name=HIH2230959.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344489.1;locus_tag=ACYKK2_000271;product=methionine adenosyltransferase;protein_id=HIH2230959.1;transl_table=11 DBLQKW010000003.1 tpg gene 67327 68550 . + . ID=gene-ACYKK2_000272;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=ACYKK2_000272 DBLQKW010000003.1 Protein Homology CDS 67327 68550 . + 0 ID=cds-HIH2230960.1;Parent=gene-ACYKK2_000272;Dbxref=NCBI_GP:HIH2230960.1;Name=HIH2230960.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344490.1;locus_tag=ACYKK2_000272;product=serine/threonine transporter SstT;protein_id=HIH2230960.1;transl_table=11 DBLQKW010000003.1 tpg gene 68560 69447 . + . ID=gene-ACYKK2_000273;Name=ACYKK2_000273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000273 DBLQKW010000003.1 Protein Homology CDS 68560 69447 . + 0 ID=cds-HIH2230961.1;Parent=gene-ACYKK2_000273;Dbxref=NCBI_GP:HIH2230961.1;Name=HIH2230961.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344491.1;locus_tag=ACYKK2_000273;product=aspartate carbamoyltransferase catalytic subunit;protein_id=HIH2230961.1;transl_table=11 DBLQKW010000003.1 tpg gene 69451 71172 . + . ID=gene-ACYKK2_000274;Name=ACYKK2_000274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000274 DBLQKW010000003.1 Protein Homology CDS 69451 71172 . + 0 ID=cds-HIH2230962.1;Parent=gene-ACYKK2_000274;Dbxref=NCBI_GP:HIH2230962.1;Name=HIH2230962.1;Ontology_term=GO:0006508,GO:0004222,GO:0008270;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344492.1;locus_tag=ACYKK2_000274;product=M3 family oligoendopeptidase;protein_id=HIH2230962.1;transl_table=11 DBLQKW010000003.1 tpg gene 71166 71603 . + . ID=gene-ACYKK2_000275;Name=ACYKK2_000275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000275 DBLQKW010000003.1 Protein Homology CDS 71166 71603 . + 0 ID=cds-HIH2230963.1;Parent=gene-ACYKK2_000275;Dbxref=NCBI_GP:HIH2230963.1;Name=HIH2230963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344493.1;locus_tag=ACYKK2_000275;product=hypothetical protein;protein_id=HIH2230963.1;transl_table=11 DBLQKW010000003.1 tpg gene 71600 73675 . + . ID=gene-ACYKK2_000276;Name=ACYKK2_000276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000276 DBLQKW010000003.1 Protein Homology CDS 71600 73675 . + 0 ID=cds-HIH2230964.1;Parent=gene-ACYKK2_000276;Dbxref=NCBI_GP:HIH2230964.1;Name=HIH2230964.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524,GO:0016853,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,isomerase activity|0016853||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344494.1;locus_tag=ACYKK2_000276;product=ATP-dependent helicase;protein_id=HIH2230964.1;transl_table=11 DBLQKW010000003.1 tpg gene 73672 74490 . + . ID=gene-ACYKK2_000277;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=ACYKK2_000277 DBLQKW010000003.1 Protein Homology CDS 73672 74490 . + 0 ID=cds-HIH2230965.1;Parent=gene-ACYKK2_000277;Dbxref=NCBI_GP:HIH2230965.1;Name=HIH2230965.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344495.1;locus_tag=ACYKK2_000277;product=tRNA pseudouridine(55) synthase TruB;protein_id=HIH2230965.1;transl_table=11 DBLQKW010000003.1 tpg gene 74484 74711 . + . ID=gene-ACYKK2_000278;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=ACYKK2_000278 DBLQKW010000003.1 Protein Homology CDS 74484 74711 . + 0 ID=cds-HIH2230966.1;Parent=gene-ACYKK2_000278;Dbxref=NCBI_GP:HIH2230966.1;Name=HIH2230966.1;Ontology_term=GO:0006109,GO:0006402,GO:0003723;gbkey=CDS;gene=csrA;go_function=RNA binding|0003723||IEA;go_process=regulation of carbohydrate metabolic process|0006109||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344496.1;locus_tag=ACYKK2_000278;product=carbon storage regulator CsrA;protein_id=HIH2230966.1;transl_table=11 DBLQKW010000003.1 tpg gene 74708 75475 . + . ID=gene-ACYKK2_000279;Name=ACYKK2_000279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000279 DBLQKW010000003.1 Protein Homology CDS 74708 75475 . + 0 ID=cds-HIH2230967.1;Parent=gene-ACYKK2_000279;Dbxref=NCBI_GP:HIH2230967.1;Name=HIH2230967.1;Ontology_term=GO:0016114,GO:0005524,GO:0050515;gbkey=CDS;go_function=ATP binding|0005524||IEA,4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344497.1;locus_tag=ACYKK2_000279;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=HIH2230967.1;transl_table=11 DBLQKW010000003.1 tpg gene 75472 75924 . + . ID=gene-ACYKK2_000280;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=ACYKK2_000280 DBLQKW010000003.1 Protein Homology CDS 75472 75924 . + 0 ID=cds-HIH2230968.1;Parent=gene-ACYKK2_000280;Dbxref=NCBI_GP:HIH2230968.1;Name=HIH2230968.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344498.1;locus_tag=ACYKK2_000280;product=SsrA-binding protein SmpB;protein_id=HIH2230968.1;transl_table=11 DBLQKW010000003.1 tpg gene 75935 76537 . + . ID=gene-ACYKK2_000281;Name=ACYKK2_000281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000281 DBLQKW010000003.1 Protein Homology CDS 75935 76537 . + 0 ID=cds-HIH2230969.1;Parent=gene-ACYKK2_000281;Dbxref=NCBI_GP:HIH2230969.1;Name=HIH2230969.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344499.1;locus_tag=ACYKK2_000281;product=TlpA disulfide reductase family protein;protein_id=HIH2230969.1;transl_table=11 DBLQKW010000003.1 tpg gene 76537 76827 . + . ID=gene-ACYKK2_000282;Name=ACYKK2_000282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000282 DBLQKW010000003.1 Protein Homology CDS 76537 76827 . + 0 ID=cds-HIH2230970.1;Parent=gene-ACYKK2_000282;Dbxref=NCBI_GP:HIH2230970.1;Name=HIH2230970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344500.1;locus_tag=ACYKK2_000282;product=ATP-dependent Clp protease adaptor ClpS;protein_id=HIH2230970.1;transl_table=11 DBLQKW010000003.1 tpg gene 76824 78953 . + . ID=gene-ACYKK2_000283;Name=ACYKK2_000283;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000283 DBLQKW010000003.1 Protein Homology CDS 76824 78953 . + 0 ID=cds-HIH2230971.1;Parent=gene-ACYKK2_000283;Dbxref=NCBI_GP:HIH2230971.1;Name=HIH2230971.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344501.1;locus_tag=ACYKK2_000283;product=AAA family ATPase;protein_id=HIH2230971.1;transl_table=11 DBLQKW010000003.1 tpg gene 78928 79575 . + . ID=gene-ACYKK2_000284;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=ACYKK2_000284 DBLQKW010000003.1 Protein Homology CDS 78928 79575 . + 0 ID=cds-HIH2230972.1;Parent=gene-ACYKK2_000284;Dbxref=NCBI_GP:HIH2230972.1;Name=HIH2230972.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344502.1;locus_tag=ACYKK2_000284;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=HIH2230972.1;transl_table=11 DBLQKW010000003.1 tpg gene 79597 80886 . - . ID=gene-ACYKK2_000285;Name=cetZ;gbkey=Gene;gene=cetZ;gene_biotype=protein_coding;locus_tag=ACYKK2_000285 DBLQKW010000003.1 Protein Homology CDS 79597 80886 . - 0 ID=cds-HIH2230973.1;Parent=gene-ACYKK2_000285;Dbxref=NCBI_GP:HIH2230973.1;Name=HIH2230973.1;gbkey=CDS;gene=cetZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344503.1;locus_tag=ACYKK2_000285;product=energy taxis response protein CetZ;protein_id=HIH2230973.1;transl_table=11 ##sequence-region DBLQKW010000004.1 1 68088 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000004.1 tpg region 1 68088 . + . ID=DBLQKW010000004.1:1..68088;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000004.1 tpg gene 1 737 . - . ID=gene-ACYKK2_000286;Name=ACYKK2_000286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000286;partial=true;start_range=.,1 DBLQKW010000004.1 Protein Homology CDS 1 737 . - 0 ID=cds-HIH2230974.1;Parent=gene-ACYKK2_000286;Dbxref=NCBI_GP:HIH2230974.1;Name=HIH2230974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002867936.1;locus_tag=ACYKK2_000286;partial=true;product=ATP-binding protein;protein_id=HIH2230974.1;start_range=.,1;transl_table=11 DBLQKW010000004.1 tpg gene 730 1956 . - . ID=gene-ACYKK2_000287;Name=ACYKK2_000287;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000287 DBLQKW010000004.1 Protein Homology CDS 730 1956 . - 0 ID=cds-HIH2230975.1;Parent=gene-ACYKK2_000287;Dbxref=NCBI_GP:HIH2230975.1;Name=HIH2230975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343867.1;locus_tag=ACYKK2_000287;product=hypothetical protein;protein_id=HIH2230975.1;transl_table=11 DBLQKW010000004.1 tpg gene 2083 2667 . + . ID=gene-ACYKK2_000288;Name=ACYKK2_000288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000288 DBLQKW010000004.1 Protein Homology CDS 2083 2667 . + 0 ID=cds-HIH2230976.1;Parent=gene-ACYKK2_000288;Dbxref=NCBI_GP:HIH2230976.1;Name=HIH2230976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343866.1;locus_tag=ACYKK2_000288;product=IMPACT family protein;protein_id=HIH2230976.1;transl_table=11 DBLQKW010000004.1 tpg gene 2711 3094 . - . ID=gene-ACYKK2_000289;Name=ACYKK2_000289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000289 DBLQKW010000004.1 Protein Homology CDS 2711 3094 . - 0 ID=cds-HIH2230977.1;Parent=gene-ACYKK2_000289;Dbxref=NCBI_GP:HIH2230977.1;Name=HIH2230977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343865.1;locus_tag=ACYKK2_000289;product=hypothetical protein;protein_id=HIH2230977.1;transl_table=11 DBLQKW010000004.1 tpg gene 3171 3506 . - . ID=gene-ACYKK2_000290;Name=ACYKK2_000290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000290 DBLQKW010000004.1 Protein Homology CDS 3171 3506 . - 0 ID=cds-HIH2230978.1;Parent=gene-ACYKK2_000290;Dbxref=NCBI_GP:HIH2230978.1;Name=HIH2230978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343864.1;locus_tag=ACYKK2_000290;product=hypothetical protein;protein_id=HIH2230978.1;transl_table=11 DBLQKW010000004.1 tpg gene 3496 5073 . - . ID=gene-ACYKK2_000291;Name=ACYKK2_000291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000291 DBLQKW010000004.1 Protein Homology CDS 3496 5073 . - 0 ID=cds-HIH2230979.1;Parent=gene-ACYKK2_000291;Dbxref=NCBI_GP:HIH2230979.1;Name=HIH2230979.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343863.1;locus_tag=ACYKK2_000291;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=HIH2230979.1;transl_table=11 DBLQKW010000004.1 tpg gene 5196 5729 . - . ID=gene-ACYKK2_000292;Name=ACYKK2_000292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000292 DBLQKW010000004.1 GeneMarkS-2+ CDS 5196 5729 . - 0 ID=cds-HIH2230980.1;Parent=gene-ACYKK2_000292;Dbxref=NCBI_GP:HIH2230980.1;Name=HIH2230980.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_000292;product=hypothetical protein;protein_id=HIH2230980.1;transl_table=11 DBLQKW010000004.1 tpg gene 5729 5989 . - . ID=gene-ACYKK2_000293;Name=ACYKK2_000293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000293 DBLQKW010000004.1 GeneMarkS-2+ CDS 5729 5989 . - 0 ID=cds-HIH2230981.1;Parent=gene-ACYKK2_000293;Dbxref=NCBI_GP:HIH2230981.1;Name=HIH2230981.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_000293;product=hypothetical protein;protein_id=HIH2230981.1;transl_table=11 DBLQKW010000004.1 tpg gene 6081 6449 . - . ID=gene-ACYKK2_000294;Name=ACYKK2_000294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000294 DBLQKW010000004.1 Protein Homology CDS 6081 6449 . - 0 ID=cds-HIH2230982.1;Parent=gene-ACYKK2_000294;Dbxref=NCBI_GP:HIH2230982.1;Name=HIH2230982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002933167.1;locus_tag=ACYKK2_000294;product=hypothetical protein;protein_id=HIH2230982.1;transl_table=11 DBLQKW010000004.1 tpg gene 6616 6825 . + . ID=gene-ACYKK2_000295;Name=ACYKK2_000295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000295 DBLQKW010000004.1 Protein Homology CDS 6616 6825 . + 0 ID=cds-HIH2230983.1;Parent=gene-ACYKK2_000295;Dbxref=NCBI_GP:HIH2230983.1;Name=HIH2230983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343859.1;locus_tag=ACYKK2_000295;product=transcriptional regulator;protein_id=HIH2230983.1;transl_table=11 DBLQKW010000004.1 tpg gene 6886 7842 . + . ID=gene-ACYKK2_000296;Name=ACYKK2_000296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000296 DBLQKW010000004.1 Protein Homology CDS 6886 7842 . + 0 ID=cds-HIH2230984.1;Parent=gene-ACYKK2_000296;Dbxref=NCBI_GP:HIH2230984.1;Name=HIH2230984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343858.1;locus_tag=ACYKK2_000296;product=hypothetical protein;protein_id=HIH2230984.1;transl_table=11 DBLQKW010000004.1 tpg gene 7847 8419 . - . ID=gene-ACYKK2_000297;Name=ACYKK2_000297;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000297 DBLQKW010000004.1 Protein Homology CDS 7847 8419 . - 0 ID=cds-HIH2230985.1;Parent=gene-ACYKK2_000297;Dbxref=NCBI_GP:HIH2230985.1;Name=HIH2230985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343857.1;locus_tag=ACYKK2_000297;product=YceI family protein;protein_id=HIH2230985.1;transl_table=11 DBLQKW010000004.1 tpg gene 8493 8855 . - . ID=gene-ACYKK2_000298;Name=ACYKK2_000298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000298 DBLQKW010000004.1 Protein Homology CDS 8493 8855 . - 0 ID=cds-HIH2230986.1;Parent=gene-ACYKK2_000298;Dbxref=NCBI_GP:HIH2230986.1;Name=HIH2230986.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343856.1;locus_tag=ACYKK2_000298;product=HIT family protein;protein_id=HIH2230986.1;transl_table=11 DBLQKW010000004.1 tpg gene 8963 9667 . + . ID=gene-ACYKK2_000299;Name=ACYKK2_000299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000299 DBLQKW010000004.1 Protein Homology CDS 8963 9667 . + 0 ID=cds-HIH2230987.1;Parent=gene-ACYKK2_000299;Dbxref=NCBI_GP:HIH2230987.1;Name=HIH2230987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343855.1;locus_tag=ACYKK2_000299;product=putative metalloprotease CJM1_0395 family protein;protein_id=HIH2230987.1;transl_table=11 DBLQKW010000004.1 tpg gene 9773 10468 . - . ID=gene-ACYKK2_000300;Name=ACYKK2_000300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000300 DBLQKW010000004.1 Protein Homology CDS 9773 10468 . - 0 ID=cds-HIH2230988.1;Parent=gene-ACYKK2_000300;Dbxref=NCBI_GP:HIH2230988.1;Name=HIH2230988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002867793.1;locus_tag=ACYKK2_000300;product=hypothetical protein;protein_id=HIH2230988.1;transl_table=11 DBLQKW010000004.1 tpg gene 10676 12397 . - . ID=gene-ACYKK2_000301;Name=ACYKK2_000301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000301 DBLQKW010000004.1 Protein Homology CDS 10676 12397 . - 0 ID=cds-HIH2230989.1;Parent=gene-ACYKK2_000301;Dbxref=NCBI_GP:HIH2230989.1;Name=HIH2230989.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343852.1;locus_tag=ACYKK2_000301;product=GMC family oxidoreductase;protein_id=HIH2230989.1;transl_table=11 DBLQKW010000004.1 tpg gene 12399 13127 . - . ID=gene-ACYKK2_000302;Name=ACYKK2_000302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000302 DBLQKW010000004.1 Protein Homology CDS 12399 13127 . - 0 ID=cds-HIH2230990.1;Parent=gene-ACYKK2_000302;Dbxref=NCBI_GP:HIH2230990.1;Name=HIH2230990.1;Ontology_term=GO:0008873,GO:0008875;gbkey=CDS;go_function=gluconate 2-dehydrogenase activity|0008873||IEA,gluconate dehydrogenase activity|0008875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343851.1;locus_tag=ACYKK2_000302;product=gluconate 2-dehydrogenase subunit 3 family protein;protein_id=HIH2230990.1;transl_table=11 DBLQKW010000004.1 tpg gene 13263 13967 . - . ID=gene-ACYKK2_000303;Name=ACYKK2_000303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000303 DBLQKW010000004.1 Protein Homology CDS 13263 13967 . - 0 ID=cds-HIH2230991.1;Parent=gene-ACYKK2_000303;Dbxref=NCBI_GP:HIH2230991.1;Name=HIH2230991.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343850.1;locus_tag=ACYKK2_000303;product=tetratricopeptide repeat protein;protein_id=HIH2230991.1;transl_table=11 DBLQKW010000004.1 tpg gene 13967 15796 . - . ID=gene-ACYKK2_000304;Name=ACYKK2_000304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000304 DBLQKW010000004.1 Protein Homology CDS 13967 15796 . - 0 ID=cds-HIH2230992.1;Parent=gene-ACYKK2_000304;Dbxref=NCBI_GP:HIH2230992.1;Name=HIH2230992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343849.1;locus_tag=ACYKK2_000304;product=dynamin family protein;protein_id=HIH2230992.1;transl_table=11 DBLQKW010000004.1 tpg gene 15786 17972 . - . ID=gene-ACYKK2_000305;Name=ACYKK2_000305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000305 DBLQKW010000004.1 Protein Homology CDS 15786 17972 . - 0 ID=cds-HIH2230993.1;Parent=gene-ACYKK2_000305;Dbxref=NCBI_GP:HIH2230993.1;Name=HIH2230993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343848.1;locus_tag=ACYKK2_000305;product=dynamin family protein;protein_id=HIH2230993.1;transl_table=11 DBLQKW010000004.1 tpg gene 18000 18725 . - . ID=gene-ACYKK2_000306;Name=ACYKK2_000306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000306 DBLQKW010000004.1 Protein Homology CDS 18000 18725 . - 0 ID=cds-HIH2230994.1;Parent=gene-ACYKK2_000306;Dbxref=NCBI_GP:HIH2230994.1;Name=HIH2230994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343847.1;locus_tag=ACYKK2_000306;product=fumarate reductase iron-sulfur subunit;protein_id=HIH2230994.1;transl_table=11 DBLQKW010000004.1 tpg gene 18718 20709 . - . ID=gene-ACYKK2_000307;Name=ACYKK2_000307;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000307 DBLQKW010000004.1 Protein Homology CDS 18718 20709 . - 0 ID=cds-HIH2230995.1;Parent=gene-ACYKK2_000307;Dbxref=NCBI_GP:HIH2230995.1;Name=HIH2230995.1;Ontology_term=GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343846.1;locus_tag=ACYKK2_000307;product=fumarate reductase flavoprotein subunit;protein_id=HIH2230995.1;transl_table=11 DBLQKW010000004.1 tpg gene 20693 21475 . - . ID=gene-ACYKK2_000308;Name=ACYKK2_000308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000308 DBLQKW010000004.1 Protein Homology CDS 20693 21475 . - 0 ID=cds-HIH2230996.1;Parent=gene-ACYKK2_000308;Dbxref=NCBI_GP:HIH2230996.1;Name=HIH2230996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343845.1;locus_tag=ACYKK2_000308;product=fumarate reductase cytochrome b subunit;protein_id=HIH2230996.1;transl_table=11 DBLQKW010000004.1 tpg gene 21545 22360 . - . ID=gene-ACYKK2_000309;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=ACYKK2_000309 DBLQKW010000004.1 Protein Homology CDS 21545 22360 . - 0 ID=cds-HIH2230997.1;Parent=gene-ACYKK2_000309;Dbxref=NCBI_GP:HIH2230997.1;Name=HIH2230997.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343844.1;locus_tag=ACYKK2_000309;product=prolipoprotein diacylglyceryl transferase;protein_id=HIH2230997.1;transl_table=11 DBLQKW010000004.1 tpg gene 22450 23349 . + . ID=gene-ACYKK2_000310;Name=ACYKK2_000310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000310 DBLQKW010000004.1 Protein Homology CDS 22450 23349 . + 0 ID=cds-HIH2230998.1;Parent=gene-ACYKK2_000310;Dbxref=NCBI_GP:HIH2230998.1;Name=HIH2230998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343843.1;locus_tag=ACYKK2_000310;product=membrane lipoprotein lipid attachment site-containing protein;protein_id=HIH2230998.1;transl_table=11 DBLQKW010000004.1 tpg gene 23424 24212 . - . ID=gene-ACYKK2_000311;Name=ACYKK2_000311;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000311 DBLQKW010000004.1 Protein Homology CDS 23424 24212 . - 0 ID=cds-HIH2230999.1;Parent=gene-ACYKK2_000311;Dbxref=NCBI_GP:HIH2230999.1;Name=HIH2230999.1;Ontology_term=GO:0019632,GO:0004764,GO:0050661;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA,NADP binding|0050661||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343842.1;locus_tag=ACYKK2_000311;product=shikimate dehydrogenase;protein_id=HIH2230999.1;transl_table=11 DBLQKW010000004.1 tpg gene 24209 25045 . - . ID=gene-ACYKK2_000312;Name=ACYKK2_000312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000312 DBLQKW010000004.1 Protein Homology CDS 24209 25045 . - 0 ID=cds-HIH2231000.1;Parent=gene-ACYKK2_000312;Dbxref=NCBI_GP:HIH2231000.1;Name=HIH2231000.1;Ontology_term=GO:0042834,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343841.1;locus_tag=ACYKK2_000312;product=SPOR domain-containing protein;protein_id=HIH2231000.1;transl_table=11 DBLQKW010000004.1 tpg gene 25059 25604 . - . ID=gene-ACYKK2_000313;Name=ACYKK2_000313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000313 DBLQKW010000004.1 Protein Homology CDS 25059 25604 . - 0 ID=cds-HIH2231001.1;Parent=gene-ACYKK2_000313;Dbxref=NCBI_GP:HIH2231001.1;Name=HIH2231001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343840.1;locus_tag=ACYKK2_000313;product=DUF1882 domain-containing protein;protein_id=HIH2231001.1;transl_table=11 DBLQKW010000004.1 tpg gene 25601 26845 . - . ID=gene-ACYKK2_000314;Name=ACYKK2_000314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000314 DBLQKW010000004.1 Protein Homology CDS 25601 26845 . - 0 ID=cds-HIH2231002.1;Parent=gene-ACYKK2_000314;Dbxref=NCBI_GP:HIH2231002.1;Name=HIH2231002.1;Ontology_term=GO:0019264,GO:0004372,GO:0030170;gbkey=CDS;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343839.1;locus_tag=ACYKK2_000314;product=serine hydroxymethyltransferase;protein_id=HIH2231002.1;transl_table=11 DBLQKW010000004.1 tpg gene 26842 28347 . - . ID=gene-ACYKK2_000315;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=ACYKK2_000315 DBLQKW010000004.1 Protein Homology CDS 26842 28347 . - 0 ID=cds-HIH2231003.1;Parent=gene-ACYKK2_000315;Dbxref=NCBI_GP:HIH2231003.1;Name=HIH2231003.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343838.1;locus_tag=ACYKK2_000315;product=lysine--tRNA ligase;protein_id=HIH2231003.1;transl_table=11 DBLQKW010000004.1 tpg gene 28348 28821 . - . ID=gene-ACYKK2_000316;Name=ACYKK2_000316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000316 DBLQKW010000004.1 Protein Homology CDS 28348 28821 . - 0 ID=cds-HIH2231004.1;Parent=gene-ACYKK2_000316;Dbxref=NCBI_GP:HIH2231004.1;Name=HIH2231004.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343837.1;locus_tag=ACYKK2_000316;product=Fur family transcriptional regulator;protein_id=HIH2231004.1;transl_table=11 DBLQKW010000004.1 tpg gene 28823 29386 . - . ID=gene-ACYKK2_000317;Name=ACYKK2_000317;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000317 DBLQKW010000004.1 Protein Homology CDS 28823 29386 . - 0 ID=cds-HIH2231005.1;Parent=gene-ACYKK2_000317;Dbxref=NCBI_GP:HIH2231005.1;Name=HIH2231005.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343836.1;locus_tag=ACYKK2_000317;product=CvpA family protein;protein_id=HIH2231005.1;transl_table=11 DBLQKW010000004.1 tpg gene 29454 29738 . - . ID=gene-ACYKK2_000318;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=ACYKK2_000318 DBLQKW010000004.1 Protein Homology CDS 29454 29738 . - 0 ID=cds-HIH2231006.1;Parent=gene-ACYKK2_000318;Dbxref=NCBI_GP:HIH2231006.1;Name=HIH2231006.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343835.1;locus_tag=ACYKK2_000318;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=HIH2231006.1;transl_table=11 DBLQKW010000004.1 tpg gene 29882 30460 . + . ID=gene-ACYKK2_000319;Name=ACYKK2_000319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000319 DBLQKW010000004.1 Protein Homology CDS 29882 30460 . + 0 ID=cds-HIH2231007.1;Parent=gene-ACYKK2_000319;Dbxref=NCBI_GP:HIH2231007.1;Name=HIH2231007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343834.1;locus_tag=ACYKK2_000319;product=hypothetical protein;protein_id=HIH2231007.1;transl_table=11 DBLQKW010000004.1 tpg gene 30457 31455 . + . ID=gene-ACYKK2_000320;Name=ACYKK2_000320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000320 DBLQKW010000004.1 Protein Homology CDS 30457 31455 . + 0 ID=cds-HIH2231008.1;Parent=gene-ACYKK2_000320;Dbxref=NCBI_GP:HIH2231008.1;Name=HIH2231008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343833.1;locus_tag=ACYKK2_000320;product=hypothetical protein;protein_id=HIH2231008.1;transl_table=11 DBLQKW010000004.1 tpg gene 31452 31742 . + . ID=gene-ACYKK2_000321;Name=ACYKK2_000321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000321 DBLQKW010000004.1 Protein Homology CDS 31452 31742 . + 0 ID=cds-HIH2231009.1;Parent=gene-ACYKK2_000321;Dbxref=NCBI_GP:HIH2231009.1;Name=HIH2231009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343832.1;locus_tag=ACYKK2_000321;product=tram-like protein;protein_id=HIH2231009.1;transl_table=11 DBLQKW010000004.1 tpg gene 31729 32358 . + . ID=gene-ACYKK2_000322;Name=ACYKK2_000322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000322 DBLQKW010000004.1 Protein Homology CDS 31729 32358 . + 0 ID=cds-HIH2231010.1;Parent=gene-ACYKK2_000322;Dbxref=NCBI_GP:HIH2231010.1;Name=HIH2231010.1;Ontology_term=GO:0004594;gbkey=CDS;go_function=pantothenate kinase activity|0004594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343831.1;locus_tag=ACYKK2_000322;product=type III pantothenate kinase;protein_id=HIH2231010.1;transl_table=11 DBLQKW010000004.1 tpg gene 32476 33822 . + . ID=gene-ACYKK2_000323;Name=ACYKK2_000323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000323 DBLQKW010000004.1 Protein Homology CDS 32476 33822 . + 0 ID=cds-HIH2231011.1;Parent=gene-ACYKK2_000323;Dbxref=NCBI_GP:HIH2231011.1;Name=HIH2231011.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343830.1;locus_tag=ACYKK2_000323;product=FAD-dependent oxidoreductase;protein_id=HIH2231011.1;transl_table=11 DBLQKW010000004.1 tpg gene 33871 35313 . + . ID=gene-ACYKK2_000324;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=ACYKK2_000324 DBLQKW010000004.1 Protein Homology CDS 33871 35313 . + 0 ID=cds-HIH2231012.1;Parent=gene-ACYKK2_000324;Dbxref=NCBI_GP:HIH2231012.1;Name=HIH2231012.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343829.1;locus_tag=ACYKK2_000324;product=pyruvate kinase;protein_id=HIH2231012.1;transl_table=11 DBLQKW010000004.1 tpg gene 35411 36046 . + . ID=gene-ACYKK2_000325;Name=ACYKK2_000325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000325 DBLQKW010000004.1 Protein Homology CDS 35411 36046 . + 0 ID=cds-HIH2231013.1;Parent=gene-ACYKK2_000325;Dbxref=NCBI_GP:HIH2231013.1;Name=HIH2231013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343828.1;locus_tag=ACYKK2_000325;product=hypothetical protein;protein_id=HIH2231013.1;transl_table=11 DBLQKW010000004.1 tpg gene 36077 38539 . - . ID=gene-ACYKK2_000326;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=ACYKK2_000326 DBLQKW010000004.1 Protein Homology CDS 36077 38539 . - 0 ID=cds-HIH2231014.1;Parent=gene-ACYKK2_000326;Dbxref=NCBI_GP:HIH2231014.1;Name=HIH2231014.1;gbkey=CDS;gene=pflB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343827.1;locus_tag=ACYKK2_000326;product=motility protein PflB;protein_id=HIH2231014.1;transl_table=11 DBLQKW010000004.1 tpg gene 38549 39784 . - . ID=gene-ACYKK2_000327;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=ACYKK2_000327 DBLQKW010000004.1 Protein Homology CDS 38549 39784 . - 0 ID=cds-HIH2231015.1;Parent=gene-ACYKK2_000327;Dbxref=NCBI_GP:HIH2231015.1;Name=HIH2231015.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343826.1;locus_tag=ACYKK2_000327;product=serine--tRNA ligase;protein_id=HIH2231015.1;transl_table=11 DBLQKW010000004.1 tpg gene 39795 40754 . - . ID=gene-ACYKK2_000328;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=ACYKK2_000328 DBLQKW010000004.1 Protein Homology CDS 39795 40754 . - 0 ID=cds-HIH2231016.1;Parent=gene-ACYKK2_000328;Dbxref=NCBI_GP:HIH2231016.1;Name=HIH2231016.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343825.1;locus_tag=ACYKK2_000328;product=tryptophan--tRNA ligase;protein_id=HIH2231016.1;transl_table=11 DBLQKW010000004.1 tpg gene 40751 41248 . - . ID=gene-ACYKK2_000329;Name=ACYKK2_000329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000329 DBLQKW010000004.1 Protein Homology CDS 40751 41248 . - 0 ID=cds-HIH2231017.1;Parent=gene-ACYKK2_000329;Dbxref=NCBI_GP:HIH2231017.1;Name=HIH2231017.1;Ontology_term=GO:0008652,GO:0009073,GO:0000287,GO:0004765,GO:0005524;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,shikimate kinase activity|0004765||IEA,ATP binding|0005524||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343824.1;locus_tag=ACYKK2_000329;product=shikimate kinase;protein_id=HIH2231017.1;transl_table=11 DBLQKW010000004.1 tpg gene 41235 42617 . - . ID=gene-ACYKK2_000330;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=ACYKK2_000330 DBLQKW010000004.1 Protein Homology CDS 41235 42617 . - 0 ID=cds-HIH2231018.1;Parent=gene-ACYKK2_000330;Dbxref=NCBI_GP:HIH2231018.1;Name=HIH2231018.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343823.1;locus_tag=ACYKK2_000330;product=ribosome biogenesis GTPase Der;protein_id=HIH2231018.1;transl_table=11 DBLQKW010000004.1 tpg gene 42718 43650 . + . ID=gene-ACYKK2_000331;Name=ACYKK2_000331;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000331 DBLQKW010000004.1 Protein Homology CDS 42718 43650 . + 0 ID=cds-HIH2231019.1;Parent=gene-ACYKK2_000331;Dbxref=NCBI_GP:HIH2231019.1;Name=HIH2231019.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343822.1;locus_tag=ACYKK2_000331;product=DMT family transporter;protein_id=HIH2231019.1;transl_table=11 DBLQKW010000004.1 tpg gene 43647 44462 . + . ID=gene-ACYKK2_000332;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=ACYKK2_000332 DBLQKW010000004.1 Protein Homology CDS 43647 44462 . + 0 ID=cds-HIH2231020.1;Parent=gene-ACYKK2_000332;Dbxref=NCBI_GP:HIH2231020.1;Name=HIH2231020.1;Ontology_term=GO:0009058,GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002862627.1;locus_tag=ACYKK2_000332;product=3-deoxy-8-phosphooctulonate synthase;protein_id=HIH2231020.1;transl_table=11 DBLQKW010000004.1 tpg gene 44459 44923 . + . ID=gene-ACYKK2_000333;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=ACYKK2_000333 DBLQKW010000004.1 Protein Homology CDS 44459 44923 . + 0 ID=cds-HIH2231021.1;Parent=gene-ACYKK2_000333;Dbxref=NCBI_GP:HIH2231021.1;Name=HIH2231021.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343820.1;locus_tag=ACYKK2_000333;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=HIH2231021.1;transl_table=11 DBLQKW010000004.1 tpg gene 44923 45321 . + . ID=gene-ACYKK2_000334;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=ACYKK2_000334 DBLQKW010000004.1 Protein Homology CDS 44923 45321 . + 0 ID=cds-HIH2231022.1;Parent=gene-ACYKK2_000334;Dbxref=NCBI_GP:HIH2231022.1;Name=HIH2231022.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343819.1;locus_tag=ACYKK2_000334;product=transcription antitermination factor NusB;protein_id=HIH2231022.1;transl_table=11 DBLQKW010000004.1 tpg gene 45318 46157 . + . ID=gene-ACYKK2_000335;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=ACYKK2_000335 DBLQKW010000004.1 Protein Homology CDS 45318 46157 . + 0 ID=cds-HIH2231023.1;Parent=gene-ACYKK2_000335;Dbxref=NCBI_GP:HIH2231023.1;Name=HIH2231023.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343818.1;locus_tag=ACYKK2_000335;product=orotidine-5'-phosphate decarboxylase;protein_id=HIH2231023.1;transl_table=11 DBLQKW010000004.1 tpg gene 46154 46939 . + . ID=gene-ACYKK2_000336;Name=ACYKK2_000336;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000336 DBLQKW010000004.1 Protein Homology CDS 46154 46939 . + 0 ID=cds-HIH2231024.1;Parent=gene-ACYKK2_000336;Dbxref=NCBI_GP:HIH2231024.1;Name=HIH2231024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343817.1;locus_tag=ACYKK2_000336;product=hypothetical protein;protein_id=HIH2231024.1;transl_table=11 DBLQKW010000004.1 tpg gene 46995 47888 . + . ID=gene-ACYKK2_000337;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=ACYKK2_000337 DBLQKW010000004.1 Protein Homology CDS 46995 47888 . + 0 ID=cds-HIH2231025.1;Parent=gene-ACYKK2_000337;Dbxref=NCBI_GP:HIH2231025.1;Name=HIH2231025.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343816.1;locus_tag=ACYKK2_000337;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=HIH2231025.1;transl_table=11 DBLQKW010000004.1 tpg gene 47888 48460 . + . ID=gene-ACYKK2_000338;Name=ACYKK2_000338;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000338 DBLQKW010000004.1 Protein Homology CDS 47888 48460 . + 0 ID=cds-HIH2231026.1;Parent=gene-ACYKK2_000338;Dbxref=NCBI_GP:HIH2231026.1;Name=HIH2231026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002857273.1;locus_tag=ACYKK2_000338;product=ferric reductase-like transmembrane domain-containing protein;protein_id=HIH2231026.1;transl_table=11 DBLQKW010000004.1 tpg gene 48425 50137 . - . ID=gene-ACYKK2_000339;Name=ACYKK2_000339;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000339 DBLQKW010000004.1 Protein Homology CDS 48425 50137 . - 0 ID=cds-HIH2231027.1;Parent=gene-ACYKK2_000339;Dbxref=NCBI_GP:HIH2231027.1;Name=HIH2231027.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343814.1;locus_tag=ACYKK2_000339;product=AAA family ATPase;protein_id=HIH2231027.1;transl_table=11 DBLQKW010000004.1 tpg gene 50137 50961 . - . ID=gene-ACYKK2_000340;Name=ACYKK2_000340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000340 DBLQKW010000004.1 Protein Homology CDS 50137 50961 . - 0 ID=cds-HIH2231028.1;Parent=gene-ACYKK2_000340;Dbxref=NCBI_GP:HIH2231028.1;Name=HIH2231028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343813.1;locus_tag=ACYKK2_000340;product=hypothetical protein;protein_id=HIH2231028.1;transl_table=11 DBLQKW010000004.1 tpg gene 50972 51448 . - . ID=gene-ACYKK2_000341;Name=ACYKK2_000341;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000341 DBLQKW010000004.1 Protein Homology CDS 50972 51448 . - 0 ID=cds-HIH2231029.1;Parent=gene-ACYKK2_000341;Dbxref=NCBI_GP:HIH2231029.1;Name=HIH2231029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343812.1;locus_tag=ACYKK2_000341;product=hypothetical protein;protein_id=HIH2231029.1;transl_table=11 DBLQKW010000004.1 tpg gene 51457 51948 . - . ID=gene-ACYKK2_000342;Name=ACYKK2_000342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000342 DBLQKW010000004.1 Protein Homology CDS 51457 51948 . - 0 ID=cds-HIH2231030.1;Parent=gene-ACYKK2_000342;Dbxref=NCBI_GP:HIH2231030.1;Name=HIH2231030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343811.1;locus_tag=ACYKK2_000342;product=YajQ family cyclic di-GMP-binding protein;protein_id=HIH2231030.1;transl_table=11 DBLQKW010000004.1 tpg gene 51938 52873 . - . ID=gene-ACYKK2_000343;Name=ACYKK2_000343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000343 DBLQKW010000004.1 Protein Homology CDS 51938 52873 . - 0 ID=cds-HIH2231031.1;Parent=gene-ACYKK2_000343;Dbxref=NCBI_GP:HIH2231031.1;Name=HIH2231031.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343810.1;locus_tag=ACYKK2_000343;product=D-2-hydroxyacid dehydrogenase;protein_id=HIH2231031.1;transl_table=11 DBLQKW010000004.1 tpg gene 52877 54046 . - . ID=gene-ACYKK2_000344;Name=ACYKK2_000344;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000344 DBLQKW010000004.1 Protein Homology CDS 52877 54046 . - 0 ID=cds-HIH2231032.1;Parent=gene-ACYKK2_000344;Dbxref=NCBI_GP:HIH2231032.1;Name=HIH2231032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343809.1;locus_tag=ACYKK2_000344;product=glutathionylspermidine synthase family protein;protein_id=HIH2231032.1;transl_table=11 DBLQKW010000004.1 tpg gene 54056 54661 . - . ID=gene-ACYKK2_000345;Name=ACYKK2_000345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000345 DBLQKW010000004.1 Protein Homology CDS 54056 54661 . - 0 ID=cds-HIH2231033.1;Parent=gene-ACYKK2_000345;Dbxref=NCBI_GP:HIH2231033.1;Name=HIH2231033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343808.1;locus_tag=ACYKK2_000345;product=UPF0323 family lipoprotein;protein_id=HIH2231033.1;transl_table=11 DBLQKW010000004.1 tpg gene 54781 54993 . - . ID=gene-ACYKK2_000346;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=ACYKK2_000346 DBLQKW010000004.1 Protein Homology CDS 54781 54993 . - 0 ID=cds-HIH2231034.1;Parent=gene-ACYKK2_000346;Dbxref=NCBI_GP:HIH2231034.1;Name=HIH2231034.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343807.1;locus_tag=ACYKK2_000346;product=30S ribosomal protein S21;protein_id=HIH2231034.1;transl_table=11 DBLQKW010000004.1 tpg gene 55154 56530 . + . ID=gene-ACYKK2_000347;Name=ccoG;gbkey=Gene;gene=ccoG;gene_biotype=protein_coding;locus_tag=ACYKK2_000347 DBLQKW010000004.1 Protein Homology CDS 55154 56530 . + 0 ID=cds-HIH2231035.1;Parent=gene-ACYKK2_000347;Dbxref=NCBI_GP:HIH2231035.1;Name=HIH2231035.1;Ontology_term=GO:0008535,GO:0016020;gbkey=CDS;gene=ccoG;go_component=membrane|0016020||IEA;go_process=respiratory chain complex IV assembly|0008535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343806.1;locus_tag=ACYKK2_000347;product=cytochrome c oxidase accessory protein CcoG;protein_id=HIH2231035.1;transl_table=11 DBLQKW010000004.1 tpg gene 56517 57149 . + . ID=gene-ACYKK2_000348;Name=cmeR;gbkey=Gene;gene=cmeR;gene_biotype=protein_coding;locus_tag=ACYKK2_000348 DBLQKW010000004.1 Protein Homology CDS 56517 57149 . + 0 ID=cds-HIH2231036.1;Parent=gene-ACYKK2_000348;Dbxref=NCBI_GP:HIH2231036.1;Name=HIH2231036.1;gbkey=CDS;gene=cmeR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343805.1;locus_tag=ACYKK2_000348;product=multidrug efflux system transcriptional regulator CmeR;protein_id=HIH2231036.1;transl_table=11 DBLQKW010000004.1 tpg gene 57244 58347 . + . ID=gene-ACYKK2_000349;Name=cmeA;gbkey=Gene;gene=cmeA;gene_biotype=protein_coding;locus_tag=ACYKK2_000349 DBLQKW010000004.1 Protein Homology CDS 57244 58347 . + 0 ID=cds-HIH2231037.1;Parent=gene-ACYKK2_000349;Dbxref=NCBI_GP:HIH2231037.1;Name=HIH2231037.1;gbkey=CDS;gene=cmeA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343804.1;locus_tag=ACYKK2_000349;product=multidrug efflux RND transporter periplasmic adaptor subunit CmeA;protein_id=HIH2231037.1;transl_table=11 DBLQKW010000004.1 tpg gene 58347 61469 . + . ID=gene-ACYKK2_000350;Name=cmeB;gbkey=Gene;gene=cmeB;gene_biotype=protein_coding;locus_tag=ACYKK2_000350 DBLQKW010000004.1 Protein Homology CDS 58347 61469 . + 0 ID=cds-HIH2231038.1;Parent=gene-ACYKK2_000350;Dbxref=NCBI_GP:HIH2231038.1;Name=HIH2231038.1;gbkey=CDS;gene=cmeB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343803.1;locus_tag=ACYKK2_000350;product=multidrug efflux RND transporter permease subunit CmeB;protein_id=HIH2231038.1;transl_table=11 DBLQKW010000004.1 tpg gene 61462 62940 . + . ID=gene-ACYKK2_000351;Name=cmeC;gbkey=Gene;gene=cmeC;gene_biotype=protein_coding;locus_tag=ACYKK2_000351 DBLQKW010000004.1 Protein Homology CDS 61462 62940 . + 0 ID=cds-HIH2231039.1;Parent=gene-ACYKK2_000351;Dbxref=NCBI_GP:HIH2231039.1;Name=HIH2231039.1;gbkey=CDS;gene=cmeC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343802.1;locus_tag=ACYKK2_000351;product=multidrug efflux transporter outer membrane subunit CmeC;protein_id=HIH2231039.1;transl_table=11 DBLQKW010000004.1 tpg gene 62963 63214 . - . ID=gene-ACYKK2_000352;Name=cmeU;gbkey=Gene;gene=cmeU;gene_biotype=protein_coding;locus_tag=ACYKK2_000352 DBLQKW010000004.1 Protein Homology CDS 62963 63214 . - 0 ID=cds-HIH2231040.1;Parent=gene-ACYKK2_000352;Dbxref=NCBI_GP:HIH2231040.1;Name=HIH2231040.1;gbkey=CDS;gene=cmeU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343801.1;locus_tag=ACYKK2_000352;product=CmeU family protein;protein_id=HIH2231040.1;transl_table=11 DBLQKW010000004.1 tpg gene 63342 64688 . + . ID=gene-ACYKK2_000353;Name=ACYKK2_000353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000353 DBLQKW010000004.1 Protein Homology CDS 63342 64688 . + 0 ID=cds-HIH2231041.1;Parent=gene-ACYKK2_000353;Dbxref=NCBI_GP:HIH2231041.1;Name=HIH2231041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343800.1;locus_tag=ACYKK2_000353;product=coproporphyrinogen III oxidase family protein;protein_id=HIH2231041.1;transl_table=11 DBLQKW010000004.1 tpg gene 64685 65137 . - . ID=gene-ACYKK2_000354;Name=hemJ;gbkey=Gene;gene=hemJ;gene_biotype=protein_coding;locus_tag=ACYKK2_000354 DBLQKW010000004.1 Protein Homology CDS 64685 65137 . - 0 ID=cds-HIH2231042.1;Parent=gene-ACYKK2_000354;Dbxref=NCBI_GP:HIH2231042.1;Name=HIH2231042.1;gbkey=CDS;gene=hemJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343799.1;locus_tag=ACYKK2_000354;product=protoporphyrinogen oxidase HemJ;protein_id=HIH2231042.1;transl_table=11 DBLQKW010000004.1 tpg gene 65121 65591 . - . ID=gene-ACYKK2_000355;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=ACYKK2_000355 DBLQKW010000004.1 Protein Homology CDS 65121 65591 . - 0 ID=cds-HIH2231043.1;Parent=gene-ACYKK2_000355;Dbxref=NCBI_GP:HIH2231043.1;Name=HIH2231043.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343798.1;locus_tag=ACYKK2_000355;product=signal peptidase II;protein_id=HIH2231043.1;transl_table=11 DBLQKW010000004.1 tpg gene 65584 66921 . - . ID=gene-ACYKK2_000356;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=ACYKK2_000356 DBLQKW010000004.1 Protein Homology CDS 65584 66921 . - 0 ID=cds-HIH2231044.1;Parent=gene-ACYKK2_000356;Dbxref=NCBI_GP:HIH2231044.1;Name=HIH2231044.1;Ontology_term=GO:0005975,GO:0009252,GO:0000287,GO:0008966;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA;go_process=carbohydrate metabolic process|0005975||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343797.1;locus_tag=ACYKK2_000356;product=phosphoglucosamine mutase;protein_id=HIH2231044.1;transl_table=11 DBLQKW010000004.1 tpg gene 67015 68040 . - . ID=gene-ACYKK2_000357;Name=ACYKK2_000357;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000357 DBLQKW010000004.1 Protein Homology CDS 67015 68040 . - 0 ID=cds-HIH2231045.1;Parent=gene-ACYKK2_000357;Dbxref=NCBI_GP:HIH2231045.1;Name=HIH2231045.1;Ontology_term=GO:0004130,GO:0016491,GO:0020037;gbkey=CDS;go_function=cytochrome-c peroxidase activity|0004130||IEA,oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343796.1;locus_tag=ACYKK2_000357;product=cytochrome-c peroxidase;protein_id=HIH2231045.1;transl_table=11 ##sequence-region DBLQKW010000005.1 1 67502 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000005.1 tpg region 1 67502 . + . ID=DBLQKW010000005.1:1..67502;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000005.1 tpg gene 65 445 . + . ID=gene-ACYKK2_000358;Name=ACYKK2_000358;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000358 DBLQKW010000005.1 Protein Homology CDS 65 445 . + 0 ID=cds-HIH2231046.1;Parent=gene-ACYKK2_000358;Dbxref=NCBI_GP:HIH2231046.1;Name=HIH2231046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344337.1;locus_tag=ACYKK2_000358;product=hypothetical protein;protein_id=HIH2231046.1;transl_table=11 DBLQKW010000005.1 tpg gene 490 4002 . + . ID=gene-ACYKK2_000359;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=ACYKK2_000359 DBLQKW010000005.1 Protein Homology CDS 490 4002 . + 0 ID=cds-HIH2231047.1;Parent=gene-ACYKK2_000359;Dbxref=NCBI_GP:HIH2231047.1;Name=HIH2231047.1;gbkey=CDS;gene=aas;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344336.1;locus_tag=ACYKK2_000359;product=acyl-[ACP]--phospholipid O-acyltransferase;protein_id=HIH2231047.1;transl_table=11 DBLQKW010000005.1 tpg gene 4010 4921 . - . ID=gene-ACYKK2_000360;Name=ACYKK2_000360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000360 DBLQKW010000005.1 Protein Homology CDS 4010 4921 . - 0 ID=cds-HIH2231048.1;Parent=gene-ACYKK2_000360;Dbxref=NCBI_GP:HIH2231048.1;Name=HIH2231048.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344335.1;locus_tag=ACYKK2_000360;product=AEC family transporter;protein_id=HIH2231048.1;transl_table=11 DBLQKW010000005.1 tpg gene 5118 5203 . - . ID=gene-ACYKK2_000361;Name=ACYKK2_000361;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_000361 DBLQKW010000005.1 tRNAscan-SE tRNA 5118 5203 . - . ID=rna-ACYKK2_000361;Parent=gene-ACYKK2_000361;anticodon=(pos:complement(5167..5169));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_000361;product=tRNA-Leu DBLQKW010000005.1 tRNAscan-SE exon 5118 5203 . - . ID=exon-ACYKK2_000361-1;Parent=rna-ACYKK2_000361;anticodon=(pos:complement(5167..5169));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_000361;product=tRNA-Leu DBLQKW010000005.1 tpg gene 5239 5577 . - . ID=gene-ACYKK2_000362;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=ACYKK2_000362 DBLQKW010000005.1 Protein Homology CDS 5239 5577 . - 0 ID=cds-HIH2231049.1;Parent=gene-ACYKK2_000362;Dbxref=NCBI_GP:HIH2231049.1;Name=HIH2231049.1;gbkey=CDS;gene=atpE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344334.1;locus_tag=ACYKK2_000362;product=F0F1 ATP synthase subunit C;protein_id=HIH2231049.1;transl_table=11 DBLQKW010000005.1 tpg gene 5811 7145 . + . ID=gene-ACYKK2_000363;Name=ACYKK2_000363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000363 DBLQKW010000005.1 Protein Homology CDS 5811 7145 . + 0 ID=cds-HIH2231050.1;Parent=gene-ACYKK2_000363;Dbxref=NCBI_GP:HIH2231050.1;Name=HIH2231050.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344333.1;locus_tag=ACYKK2_000363;product=sodium-dependent transporter;protein_id=HIH2231050.1;transl_table=11 DBLQKW010000005.1 tpg gene 7158 8498 . + . ID=gene-ACYKK2_000364;Name=ACYKK2_000364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000364 DBLQKW010000005.1 Protein Homology CDS 7158 8498 . + 0 ID=cds-HIH2231051.1;Parent=gene-ACYKK2_000364;Dbxref=NCBI_GP:HIH2231051.1;Name=HIH2231051.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344332.1;locus_tag=ACYKK2_000364;product=sodium-dependent transporter;protein_id=HIH2231051.1;transl_table=11 DBLQKW010000005.1 tpg gene 8530 10329 . + . ID=gene-ACYKK2_000365;Name=pycB;gbkey=Gene;gene=pycB;gene_biotype=protein_coding;locus_tag=ACYKK2_000365 DBLQKW010000005.1 Protein Homology CDS 8530 10329 . + 0 ID=cds-HIH2231052.1;Parent=gene-ACYKK2_000365;Dbxref=NCBI_GP:HIH2231052.1;Name=HIH2231052.1;gbkey=CDS;gene=pycB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344331.1;locus_tag=ACYKK2_000365;product=biotin/lipoyl-containing protein;protein_id=HIH2231052.1;transl_table=11 DBLQKW010000005.1 tpg gene 10342 11916 . + . ID=gene-ACYKK2_000366;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=ACYKK2_000366 DBLQKW010000005.1 Protein Homology CDS 10342 11916 . + 0 ID=cds-HIH2231053.1;Parent=gene-ACYKK2_000366;Dbxref=NCBI_GP:HIH2231053.1;Name=HIH2231053.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344330.1;locus_tag=ACYKK2_000366;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=HIH2231053.1;transl_table=11 DBLQKW010000005.1 tpg gene 11926 13308 . + . ID=gene-ACYKK2_000367;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=ACYKK2_000367 DBLQKW010000005.1 Protein Homology CDS 11926 13308 . + 0 ID=cds-HIH2231054.1;Parent=gene-ACYKK2_000367;Dbxref=NCBI_GP:HIH2231054.1;Name=HIH2231054.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344329.1;locus_tag=ACYKK2_000367;product=argininosuccinate lyase;protein_id=HIH2231054.1;transl_table=11 DBLQKW010000005.1 tpg gene 13330 14433 . - . ID=gene-ACYKK2_000368;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=ACYKK2_000368 DBLQKW010000005.1 Protein Homology CDS 13330 14433 . - 0 ID=cds-HIH2231055.1;Parent=gene-ACYKK2_000368;Dbxref=NCBI_GP:HIH2231055.1;Name=HIH2231055.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344328.1;locus_tag=ACYKK2_000368;product=redox-regulated ATPase YchF;protein_id=HIH2231055.1;transl_table=11 DBLQKW010000005.1 tpg gene 14430 15881 . - . ID=gene-ACYKK2_000369;Name=ACYKK2_000369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000369 DBLQKW010000005.1 Protein Homology CDS 14430 15881 . - 0 ID=cds-HIH2231056.1;Parent=gene-ACYKK2_000369;Dbxref=NCBI_GP:HIH2231056.1;Name=HIH2231056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344327.1;locus_tag=ACYKK2_000369;product=leucyl aminopeptidase;protein_id=HIH2231056.1;transl_table=11 DBLQKW010000005.1 tpg gene 15878 16474 . - . ID=gene-ACYKK2_000370;Name=ACYKK2_000370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000370 DBLQKW010000005.1 Protein Homology CDS 15878 16474 . - 0 ID=cds-HIH2231057.1;Parent=gene-ACYKK2_000370;Dbxref=NCBI_GP:HIH2231057.1;Name=HIH2231057.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344326.1;locus_tag=ACYKK2_000370;product=DedA family protein;protein_id=HIH2231057.1;transl_table=11 DBLQKW010000005.1 tpg gene 16493 17041 . - . ID=gene-ACYKK2_000371;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=ACYKK2_000371 DBLQKW010000005.1 Protein Homology CDS 16493 17041 . - 0 ID=cds-HIH2231058.1;Parent=gene-ACYKK2_000371;Dbxref=NCBI_GP:HIH2231058.1;Name=HIH2231058.1;Ontology_term=GO:0006168,GO:0003999,GO:0005737;gbkey=CDS;gene=apt;go_component=cytoplasm|0005737||IEA;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344325.1;locus_tag=ACYKK2_000371;product=adenine phosphoribosyltransferase;protein_id=HIH2231058.1;transl_table=11 DBLQKW010000005.1 tpg gene 17038 17370 . - . ID=gene-ACYKK2_000372;Name=ACYKK2_000372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000372 DBLQKW010000005.1 Protein Homology CDS 17038 17370 . - 0 ID=cds-HIH2231059.1;Parent=gene-ACYKK2_000372;Dbxref=NCBI_GP:HIH2231059.1;Name=HIH2231059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344324.1;locus_tag=ACYKK2_000372;product=hypothetical protein;protein_id=HIH2231059.1;transl_table=11 DBLQKW010000005.1 tpg gene 17370 17807 . - . ID=gene-ACYKK2_000373;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=ACYKK2_000373 DBLQKW010000005.1 Protein Homology CDS 17370 17807 . - 0 ID=cds-HIH2231060.1;Parent=gene-ACYKK2_000373;Dbxref=NCBI_GP:HIH2231060.1;Name=HIH2231060.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiB;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344323.1;locus_tag=ACYKK2_000373;product=ribose 5-phosphate isomerase B;protein_id=HIH2231060.1;transl_table=11 DBLQKW010000005.1 tpg gene 17974 18528 . + . ID=gene-ACYKK2_000374;Name=cheB';gbkey=Gene;gene=cheB';gene_biotype=protein_coding;locus_tag=ACYKK2_000374 DBLQKW010000005.1 Protein Homology CDS 17974 18528 . + 0 ID=cds-HIH2231061.1;Parent=gene-ACYKK2_000374;Dbxref=NCBI_GP:HIH2231061.1;Name=HIH2231061.1;gbkey=CDS;gene=cheB';inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344322.1;locus_tag=ACYKK2_000374;product=CheB methylesterase domain-containing protein;protein_id=HIH2231061.1;transl_table=11 DBLQKW010000005.1 tpg gene 18544 19332 . + . ID=gene-ACYKK2_000375;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=ACYKK2_000375 DBLQKW010000005.1 Protein Homology CDS 18544 19332 . + 0 ID=cds-HIH2231062.1;Parent=gene-ACYKK2_000375;Dbxref=NCBI_GP:HIH2231062.1;Name=HIH2231062.1;gbkey=CDS;gene=cheR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344321.1;locus_tag=ACYKK2_000375;product=CheR family methyltransferase;protein_id=HIH2231062.1;transl_table=11 DBLQKW010000005.1 tpg gene 19468 20196 . + . ID=gene-ACYKK2_000376;Name=pebC;gbkey=Gene;gene=pebC;gene_biotype=protein_coding;locus_tag=ACYKK2_000376 DBLQKW010000005.1 Protein Homology CDS 19468 20196 . + 0 ID=cds-HIH2231063.1;Parent=gene-ACYKK2_000376;Dbxref=NCBI_GP:HIH2231063.1;Name=HIH2231063.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=pebC;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344320.1;locus_tag=ACYKK2_000376;product=amino acid ABC transporter ATP-binding protein;protein_id=HIH2231063.1;transl_table=11 DBLQKW010000005.1 tpg gene 20218 20997 . + . ID=gene-ACYKK2_000377;Name=peb1A;gbkey=Gene;gene=peb1A;gene_biotype=protein_coding;locus_tag=ACYKK2_000377 DBLQKW010000005.1 Protein Homology CDS 20218 20997 . + 0 ID=cds-HIH2231064.1;Parent=gene-ACYKK2_000377;Dbxref=NCBI_GP:HIH2231064.1;Name=HIH2231064.1;gbkey=CDS;gene=peb1A;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344319.1;locus_tag=ACYKK2_000377;product=bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein PEB1a;protein_id=HIH2231064.1;transl_table=11 DBLQKW010000005.1 tpg gene 20999 21751 . + . ID=gene-ACYKK2_000378;Name=ACYKK2_000378;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000378 DBLQKW010000005.1 Protein Homology CDS 20999 21751 . + 0 ID=cds-HIH2231065.1;Parent=gene-ACYKK2_000378;Dbxref=NCBI_GP:HIH2231065.1;Name=HIH2231065.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344318.1;locus_tag=ACYKK2_000378;product=amino acid ABC transporter permease;protein_id=HIH2231065.1;transl_table=11 DBLQKW010000005.1 tpg gene 21762 22421 . + . ID=gene-ACYKK2_000379;Name=ACYKK2_000379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000379 DBLQKW010000005.1 Protein Homology CDS 21762 22421 . + 0 ID=cds-HIH2231066.1;Parent=gene-ACYKK2_000379;Dbxref=NCBI_GP:HIH2231066.1;Name=HIH2231066.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344317.1;locus_tag=ACYKK2_000379;product=amino acid ABC transporter permease;protein_id=HIH2231066.1;transl_table=11 DBLQKW010000005.1 tpg gene 22529 23458 . + . ID=gene-ACYKK2_000380;Name=prsA;gbkey=Gene;gene=prsA;gene_biotype=protein_coding;locus_tag=ACYKK2_000380 DBLQKW010000005.1 Protein Homology CDS 22529 23458 . + 0 ID=cds-HIH2231067.1;Parent=gene-ACYKK2_000380;Dbxref=NCBI_GP:HIH2231067.1;Name=HIH2231067.1;Ontology_term=GO:0006015,GO:0009156,GO:0009165,GO:0016310,GO:0000287,GO:0004749,GO:0005524,GO:0016301,GO:0005737;gbkey=CDS;gene=prsA;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,ribose phosphate diphosphokinase activity|0004749||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA,ribonucleoside monophosphate biosynthetic process|0009156||IEA,nucleotide biosynthetic process|0009165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344316.1;locus_tag=ACYKK2_000380;product=ribose-phosphate pyrophosphokinase;protein_id=HIH2231067.1;transl_table=11 DBLQKW010000005.1 tpg gene 23625 25736 . + . ID=gene-ACYKK2_000381;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=ACYKK2_000381 DBLQKW010000005.1 Protein Homology CDS 23625 25736 . + 0 ID=cds-HIH2231068.1;Parent=gene-ACYKK2_000381;Dbxref=NCBI_GP:HIH2231068.1;Name=HIH2231068.1;Ontology_term=GO:0009267,GO:0016020;gbkey=CDS;gene=cstA;go_component=membrane|0016020||IEA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344315.1;locus_tag=ACYKK2_000381;product=carbon starvation CstA family protein;protein_id=HIH2231068.1;transl_table=11 DBLQKW010000005.1 tpg gene 25717 25914 . + . ID=gene-ACYKK2_000382;Name=kcuS;gbkey=Gene;gene=kcuS;gene_biotype=protein_coding;locus_tag=ACYKK2_000382 DBLQKW010000005.1 Protein Homology CDS 25717 25914 . + 0 ID=cds-HIH2231069.1;Parent=gene-ACYKK2_000382;Dbxref=NCBI_GP:HIH2231069.1;Name=HIH2231069.1;gbkey=CDS;gene=kcuS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_148936504.1;locus_tag=ACYKK2_000382;product=KCU-star family selenoprotein;protein_id=HIH2231069.1;transl_table=11 DBLQKW010000005.1 tpg gene 25954 26367 . - . ID=gene-ACYKK2_000383;Name=ACYKK2_000383;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000383 DBLQKW010000005.1 Protein Homology CDS 25954 26367 . - 0 ID=cds-HIH2231070.1;Parent=gene-ACYKK2_000383;Dbxref=NCBI_GP:HIH2231070.1;Name=HIH2231070.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344313.1;locus_tag=ACYKK2_000383;product=acyl-CoA thioesterase;protein_id=HIH2231070.1;transl_table=11 DBLQKW010000005.1 tpg gene 26429 28261 . + . ID=gene-ACYKK2_000384;Name=ciaB;gbkey=Gene;gene=ciaB;gene_biotype=protein_coding;locus_tag=ACYKK2_000384 DBLQKW010000005.1 Protein Homology CDS 26429 28261 . + 0 ID=cds-HIH2231071.1;Parent=gene-ACYKK2_000384;Dbxref=NCBI_GP:HIH2231071.1;Name=HIH2231071.1;gbkey=CDS;gene=ciaB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344312.1;locus_tag=ACYKK2_000384;product=invasion protein CiaB;protein_id=HIH2231071.1;transl_table=11 DBLQKW010000005.1 tpg gene 28363 28659 . + . ID=gene-ACYKK2_000385;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=ACYKK2_000385 DBLQKW010000005.1 Protein Homology CDS 28363 28659 . + 0 ID=cds-HIH2231072.1;Parent=gene-ACYKK2_000385;Dbxref=NCBI_GP:HIH2231072.1;Name=HIH2231072.1;Ontology_term=GO:0030261,GO:0003677;gbkey=CDS;gene=hupB;go_function=DNA binding|0003677||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344311.1;locus_tag=ACYKK2_000385;product=HU family DNA-binding protein;protein_id=HIH2231072.1;transl_table=11 DBLQKW010000005.1 tpg gene 28786 29685 . + . ID=gene-ACYKK2_000386;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=ACYKK2_000386 DBLQKW010000005.1 Protein Homology CDS 28786 29685 . + 0 ID=cds-HIH2231073.1;Parent=gene-ACYKK2_000386;Dbxref=NCBI_GP:HIH2231073.1;Name=HIH2231073.1;gbkey=CDS;gene=cysM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344310.1;locus_tag=ACYKK2_000386;product=cysteine synthase B;protein_id=HIH2231073.1;transl_table=11 DBLQKW010000005.1 tpg gene 29692 30252 . - . ID=gene-ACYKK2_000387;Name=ACYKK2_000387;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000387 DBLQKW010000005.1 Protein Homology CDS 29692 30252 . - 0 ID=cds-HIH2231074.1;Parent=gene-ACYKK2_000387;Dbxref=NCBI_GP:HIH2231074.1;Name=HIH2231074.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344309.1;locus_tag=ACYKK2_000387;product=SCO family protein;protein_id=HIH2231074.1;transl_table=11 DBLQKW010000005.1 tpg gene 30249 30701 . - . ID=gene-ACYKK2_000388;Name=ACYKK2_000388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000388 DBLQKW010000005.1 Protein Homology CDS 30249 30701 . - 0 ID=cds-HIH2231075.1;Parent=gene-ACYKK2_000388;Dbxref=NCBI_GP:HIH2231075.1;Name=HIH2231075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344308.1;locus_tag=ACYKK2_000388;product=hypothetical protein;protein_id=HIH2231075.1;transl_table=11 DBLQKW010000005.1 tpg gene 30705 31124 . - . ID=gene-ACYKK2_000389;Name=ACYKK2_000389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000389 DBLQKW010000005.1 Protein Homology CDS 30705 31124 . - 0 ID=cds-HIH2231076.1;Parent=gene-ACYKK2_000389;Dbxref=NCBI_GP:HIH2231076.1;Name=HIH2231076.1;Ontology_term=GO:0016531;gbkey=CDS;go_function=copper chaperone activity|0016531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344307.1;locus_tag=ACYKK2_000389;product=copper chaperone PCu(A)C;protein_id=HIH2231076.1;transl_table=11 DBLQKW010000005.1 tpg pseudogene 31210 31676 . - . ID=gene-ACYKK2_000390;Name=ACYKK2_000390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_000390;pseudo=true DBLQKW010000005.1 Protein Homology CDS 31210 31676 . - 0 ID=cds-ACYKK2_000390;Parent=gene-ACYKK2_000390;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344306.1;locus_tag=ACYKK2_000390;product=hypothetical protein;pseudo=true;transl_table=11 DBLQKW010000005.1 tpg gene 31832 32809 . + . ID=gene-ACYKK2_000391;Name=ACYKK2_000391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000391 DBLQKW010000005.1 Protein Homology CDS 31832 32809 . + 0 ID=cds-HIH2231077.1;Parent=gene-ACYKK2_000391;Dbxref=NCBI_GP:HIH2231077.1;Name=HIH2231077.1;Ontology_term=GO:0018104,GO:0071972;gbkey=CDS;go_function=peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344305.1;locus_tag=ACYKK2_000391;product=L%2CD-transpeptidase family protein;protein_id=HIH2231077.1;transl_table=11 DBLQKW010000005.1 tpg gene 32810 33796 . + . ID=gene-ACYKK2_000392;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=ACYKK2_000392 DBLQKW010000005.1 Protein Homology CDS 32810 33796 . + 0 ID=cds-HIH2231078.1;Parent=gene-ACYKK2_000392;Dbxref=NCBI_GP:HIH2231078.1;Name=HIH2231078.1;gbkey=CDS;gene=alr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344304.1;locus_tag=ACYKK2_000392;product=alanine racemase;protein_id=HIH2231078.1;transl_table=11 DBLQKW010000005.1 tpg gene 33799 34266 . + . ID=gene-ACYKK2_000393;Name=ACYKK2_000393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000393 DBLQKW010000005.1 Protein Homology CDS 33799 34266 . + 0 ID=cds-HIH2231079.1;Parent=gene-ACYKK2_000393;Dbxref=NCBI_GP:HIH2231079.1;Name=HIH2231079.1;Ontology_term=GO:0001510,GO:0003723,GO:0008173,GO:0141098,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,tRNA (cytidine(34)-2'-O)-methyltransferase activity|0141098||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344303.1;locus_tag=ACYKK2_000393;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=HIH2231079.1;transl_table=11 DBLQKW010000005.1 tpg gene 34370 35836 . + . ID=gene-ACYKK2_000394;Name=ACYKK2_000394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000394 DBLQKW010000005.1 Protein Homology CDS 34370 35836 . + 0 ID=cds-HIH2231080.1;Parent=gene-ACYKK2_000394;Dbxref=NCBI_GP:HIH2231080.1;Name=HIH2231080.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344302.1;locus_tag=ACYKK2_000394;product=alanine/glycine:cation symporter family protein;protein_id=HIH2231080.1;transl_table=11 DBLQKW010000005.1 tpg gene 35864 36592 . - . ID=gene-ACYKK2_000395;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=ACYKK2_000395 DBLQKW010000005.1 Protein Homology CDS 35864 36592 . - 0 ID=cds-HIH2231081.1;Parent=gene-ACYKK2_000395;Dbxref=NCBI_GP:HIH2231081.1;Name=HIH2231081.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344301.1;locus_tag=ACYKK2_000395;product=amino acid ABC transporter ATP-binding protein;protein_id=HIH2231081.1;transl_table=11 DBLQKW010000005.1 tpg gene 36585 37328 . - . ID=gene-ACYKK2_000396;Name=ACYKK2_000396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000396 DBLQKW010000005.1 Protein Homology CDS 36585 37328 . - 0 ID=cds-HIH2231082.1;Parent=gene-ACYKK2_000396;Dbxref=NCBI_GP:HIH2231082.1;Name=HIH2231082.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344300.1;locus_tag=ACYKK2_000396;product=amino acid ABC transporter permease;protein_id=HIH2231082.1;transl_table=11 DBLQKW010000005.1 tpg gene 37411 37590 . + . ID=gene-ACYKK2_000397;Name=ACYKK2_000397;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000397 DBLQKW010000005.1 Protein Homology CDS 37411 37590 . + 0 ID=cds-HIH2231083.1;Parent=gene-ACYKK2_000397;Dbxref=NCBI_GP:HIH2231083.1;Name=HIH2231083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344299.1;locus_tag=ACYKK2_000397;product=hypothetical protein;protein_id=HIH2231083.1;transl_table=11 DBLQKW010000005.1 tpg gene 37583 38152 . + . ID=gene-ACYKK2_000398;Name=thiJ;gbkey=Gene;gene=thiJ;gene_biotype=protein_coding;locus_tag=ACYKK2_000398 DBLQKW010000005.1 Protein Homology CDS 37583 38152 . + 0 ID=cds-HIH2231084.1;Parent=gene-ACYKK2_000398;Dbxref=NCBI_GP:HIH2231084.1;Name=HIH2231084.1;gbkey=CDS;gene=thiJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344298.1;locus_tag=ACYKK2_000398;product=DJ-1 family glyoxalase III;protein_id=HIH2231084.1;transl_table=11 DBLQKW010000005.1 tpg gene 38182 38547 . - . ID=gene-ACYKK2_000399;Name=ACYKK2_000399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000399 DBLQKW010000005.1 Protein Homology CDS 38182 38547 . - 0 ID=cds-HIH2231085.1;Parent=gene-ACYKK2_000399;Dbxref=NCBI_GP:HIH2231085.1;Name=HIH2231085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344297.1;locus_tag=ACYKK2_000399;product=histidine triad nucleotide-binding protein;protein_id=HIH2231085.1;transl_table=11 DBLQKW010000005.1 tpg gene 38670 39662 . + . ID=gene-ACYKK2_000400;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=ACYKK2_000400 DBLQKW010000005.1 Protein Homology CDS 38670 39662 . + 0 ID=cds-HIH2231086.1;Parent=gene-ACYKK2_000400;Dbxref=NCBI_GP:HIH2231086.1;Name=HIH2231086.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344296.1;locus_tag=ACYKK2_000400;product=phenylalanine--tRNA ligase subunit alpha;protein_id=HIH2231086.1;transl_table=11 DBLQKW010000005.1 tpg gene 39659 41980 . + . ID=gene-ACYKK2_000401;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=ACYKK2_000401 DBLQKW010000005.1 Protein Homology CDS 39659 41980 . + 0 ID=cds-HIH2231087.1;Parent=gene-ACYKK2_000401;Dbxref=NCBI_GP:HIH2231087.1;Name=HIH2231087.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344295.1;locus_tag=ACYKK2_000401;product=phenylalanine--tRNA ligase subunit beta;protein_id=HIH2231087.1;transl_table=11 DBLQKW010000005.1 tpg gene 41977 43263 . + . ID=gene-ACYKK2_000402;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=ACYKK2_000402 DBLQKW010000005.1 Protein Homology CDS 41977 43263 . + 0 ID=cds-HIH2231088.1;Parent=gene-ACYKK2_000402;Dbxref=NCBI_GP:HIH2231088.1;Name=HIH2231088.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344294.1;locus_tag=ACYKK2_000402;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=HIH2231088.1;transl_table=11 DBLQKW010000005.1 tpg gene 43253 44086 . + . ID=gene-ACYKK2_000403;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;locus_tag=ACYKK2_000403 DBLQKW010000005.1 Protein Homology CDS 43253 44086 . + 0 ID=cds-HIH2231089.1;Parent=gene-ACYKK2_000403;Dbxref=NCBI_GP:HIH2231089.1;Name=HIH2231089.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344293.1;locus_tag=ACYKK2_000403;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=HIH2231089.1;transl_table=11 DBLQKW010000005.1 tpg gene 44218 45888 . + . ID=gene-ACYKK2_000404;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=ACYKK2_000404 DBLQKW010000005.1 Protein Homology CDS 44218 45888 . + 0 ID=cds-HIH2231090.1;Parent=gene-ACYKK2_000404;Dbxref=NCBI_GP:HIH2231090.1;Name=HIH2231090.1;Ontology_term=GO:0003676;gbkey=CDS;gene=rpsA;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344292.1;locus_tag=ACYKK2_000404;product=30S ribosomal protein S1;protein_id=HIH2231090.1;transl_table=11 DBLQKW010000005.1 tpg gene 45888 46376 . + . ID=gene-ACYKK2_000405;Name=ACYKK2_000405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000405 DBLQKW010000005.1 Protein Homology CDS 45888 46376 . + 0 ID=cds-HIH2231091.1;Parent=gene-ACYKK2_000405;Dbxref=NCBI_GP:HIH2231091.1;Name=HIH2231091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344291.1;locus_tag=ACYKK2_000405;product=hypothetical protein;protein_id=HIH2231091.1;transl_table=11 DBLQKW010000005.1 tpg gene 46373 47956 . + . ID=gene-ACYKK2_000406;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=ACYKK2_000406 DBLQKW010000005.1 Protein Homology CDS 46373 47956 . + 0 ID=cds-HIH2231092.1;Parent=gene-ACYKK2_000406;Dbxref=NCBI_GP:HIH2231092.1;Name=HIH2231092.1;Ontology_term=GO:0006564,GO:0004617;gbkey=CDS;gene=serA;go_function=phosphoglycerate dehydrogenase activity|0004617||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344290.1;locus_tag=ACYKK2_000406;product=phosphoglycerate dehydrogenase;protein_id=HIH2231092.1;transl_table=11 DBLQKW010000005.1 tpg gene 47943 48605 . + . ID=gene-ACYKK2_000407;Name=ACYKK2_000407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000407 DBLQKW010000005.1 Protein Homology CDS 47943 48605 . + 0 ID=cds-HIH2231093.1;Parent=gene-ACYKK2_000407;Dbxref=NCBI_GP:HIH2231093.1;Name=HIH2231093.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344289.1;locus_tag=ACYKK2_000407;product=response regulator transcription factor;protein_id=HIH2231093.1;transl_table=11 DBLQKW010000005.1 tpg gene 48599 49888 . + . ID=gene-ACYKK2_000408;Name=ACYKK2_000408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000408 DBLQKW010000005.1 Protein Homology CDS 48599 49888 . + 0 ID=cds-HIH2231094.1;Parent=gene-ACYKK2_000408;Dbxref=NCBI_GP:HIH2231094.1;Name=HIH2231094.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344288.1;locus_tag=ACYKK2_000408;product=sensor histidine kinase;protein_id=HIH2231094.1;transl_table=11 DBLQKW010000005.1 tpg gene 49892 51823 . + . ID=gene-ACYKK2_000409;Name=abc-f;gbkey=Gene;gene=abc-f;gene_biotype=protein_coding;locus_tag=ACYKK2_000409 DBLQKW010000005.1 Protein Homology CDS 49892 51823 . + 0 ID=cds-HIH2231095.1;Parent=gene-ACYKK2_000409;Dbxref=NCBI_GP:HIH2231095.1;Name=HIH2231095.1;Ontology_term=GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=abc-f;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344287.1;locus_tag=ACYKK2_000409;product=ribosomal protection-like ABC-F family protein;protein_id=HIH2231095.1;transl_table=11 DBLQKW010000005.1 tpg gene 51853 51927 . - . ID=gene-ACYKK2_000410;Name=ACYKK2_000410;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_000410 DBLQKW010000005.1 tRNAscan-SE tRNA 51853 51927 . - . ID=rna-ACYKK2_000410;Parent=gene-ACYKK2_000410;anticodon=(pos:complement(51893..51895));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_000410;product=tRNA-Gly DBLQKW010000005.1 tRNAscan-SE exon 51853 51927 . - . ID=exon-ACYKK2_000410-1;Parent=rna-ACYKK2_000410;anticodon=(pos:complement(51893..51895));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_000410;product=tRNA-Gly DBLQKW010000005.1 tpg gene 51938 52024 . - . ID=gene-ACYKK2_000411;Name=ACYKK2_000411;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_000411 DBLQKW010000005.1 tRNAscan-SE tRNA 51938 52024 . - . ID=rna-ACYKK2_000411;Parent=gene-ACYKK2_000411;anticodon=(pos:complement(51988..51990));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_000411;product=tRNA-Leu DBLQKW010000005.1 tRNAscan-SE exon 51938 52024 . - . ID=exon-ACYKK2_000411-1;Parent=rna-ACYKK2_000411;anticodon=(pos:complement(51988..51990));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_000411;product=tRNA-Leu DBLQKW010000005.1 tpg gene 52205 54457 . + . ID=gene-ACYKK2_000412;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=ACYKK2_000412 DBLQKW010000005.1 Protein Homology CDS 52205 54457 . + 0 ID=cds-HIH2231096.1;Parent=gene-ACYKK2_000412;Dbxref=NCBI_GP:HIH2231096.1;Name=HIH2231096.1;gbkey=CDS;gene=flgL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344286.1;locus_tag=ACYKK2_000412;product=flagellar hook-associated protein FlgL;protein_id=HIH2231096.1;transl_table=11 DBLQKW010000005.1 tpg gene 54567 57407 . + . ID=gene-ACYKK2_000413;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=ACYKK2_000413 DBLQKW010000005.1 Protein Homology CDS 54567 57407 . + 0 ID=cds-HIH2231097.1;Parent=gene-ACYKK2_000413;Dbxref=NCBI_GP:HIH2231097.1;Name=HIH2231097.1;gbkey=CDS;gene=ftsK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344285.1;locus_tag=ACYKK2_000413;product=DNA translocase FtsK;protein_id=HIH2231097.1;transl_table=11 DBLQKW010000005.1 tpg gene 57493 57765 . - . ID=gene-ACYKK2_000414;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=ACYKK2_000414 DBLQKW010000005.1 Protein Homology CDS 57493 57765 . - 0 ID=cds-HIH2231098.1;Parent=gene-ACYKK2_000414;Dbxref=NCBI_GP:HIH2231098.1;Name=HIH2231098.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344284.1;locus_tag=ACYKK2_000414;product=30S ribosomal protein S15;protein_id=HIH2231098.1;transl_table=11 DBLQKW010000005.1 tpg gene 57940 58350 . + . ID=gene-ACYKK2_000415;Name=ACYKK2_000415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000415 DBLQKW010000005.1 Protein Homology CDS 57940 58350 . + 0 ID=cds-HIH2231099.1;Parent=gene-ACYKK2_000415;Dbxref=NCBI_GP:HIH2231099.1;Name=HIH2231099.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344283.1;locus_tag=ACYKK2_000415;product=Rrf2 family transcriptional regulator;protein_id=HIH2231099.1;transl_table=11 DBLQKW010000005.1 tpg gene 58337 60511 . + . ID=gene-ACYKK2_000416;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=ACYKK2_000416 DBLQKW010000005.1 Protein Homology CDS 58337 60511 . + 0 ID=cds-HIH2231100.1;Parent=gene-ACYKK2_000416;Dbxref=NCBI_GP:HIH2231100.1;Name=HIH2231100.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344282.1;locus_tag=ACYKK2_000416;product=flagellar biosynthesis protein FlhA;protein_id=HIH2231100.1;transl_table=11 DBLQKW010000005.1 tpg gene 60520 61566 . + . ID=gene-ACYKK2_000417;Name=ACYKK2_000417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000417 DBLQKW010000005.1 Protein Homology CDS 60520 61566 . + 0 ID=cds-HIH2231101.1;Parent=gene-ACYKK2_000417;Dbxref=NCBI_GP:HIH2231101.1;Name=HIH2231101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344281.1;locus_tag=ACYKK2_000417;product=DHH family phosphoesterase;protein_id=HIH2231101.1;transl_table=11 DBLQKW010000005.1 tpg gene 61550 61792 . + . ID=gene-ACYKK2_000418;Name=ACYKK2_000418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000418 DBLQKW010000005.1 Protein Homology CDS 61550 61792 . + 0 ID=cds-HIH2231102.1;Parent=gene-ACYKK2_000418;Dbxref=NCBI_GP:HIH2231102.1;Name=HIH2231102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344280.1;locus_tag=ACYKK2_000418;product=hypothetical protein;protein_id=HIH2231102.1;transl_table=11 DBLQKW010000005.1 tpg gene 61789 62421 . + . ID=gene-ACYKK2_000419;Name=ACYKK2_000419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000419 DBLQKW010000005.1 Protein Homology CDS 61789 62421 . + 0 ID=cds-HIH2231103.1;Parent=gene-ACYKK2_000419;Dbxref=NCBI_GP:HIH2231103.1;Name=HIH2231103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344279.1;locus_tag=ACYKK2_000419;product=hypothetical protein;protein_id=HIH2231103.1;transl_table=11 DBLQKW010000005.1 tpg gene 62409 62549 . - . ID=gene-ACYKK2_000420;Name=ACYKK2_000420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000420 DBLQKW010000005.1 Protein Homology CDS 62409 62549 . - 0 ID=cds-HIH2231104.1;Parent=gene-ACYKK2_000420;Dbxref=NCBI_GP:HIH2231104.1;Name=HIH2231104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002852524.1;locus_tag=ACYKK2_000420;product=hypothetical protein;protein_id=HIH2231104.1;transl_table=11 DBLQKW010000005.1 tpg gene 62882 63034 . + . ID=gene-ACYKK2_000421;Name=ACYKK2_000421;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000421 DBLQKW010000005.1 GeneMarkS-2+ CDS 62882 63034 . + 0 ID=cds-HIH2231105.1;Parent=gene-ACYKK2_000421;Dbxref=NCBI_GP:HIH2231105.1;Name=HIH2231105.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_000421;product=hypothetical protein;protein_id=HIH2231105.1;transl_table=11 DBLQKW010000005.1 tpg gene 63092 63223 . + . ID=gene-ACYKK2_000422;Name=ACYKK2_000422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000422 DBLQKW010000005.1 Protein Homology CDS 63092 63223 . + 0 ID=cds-HIH2231106.1;Parent=gene-ACYKK2_000422;Dbxref=NCBI_GP:HIH2231106.1;Name=HIH2231106.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF044772.3;locus_tag=ACYKK2_000422;product=c-type cytochrome;protein_id=HIH2231106.1;transl_table=11 DBLQKW010000005.1 tpg gene 63288 63665 . + . ID=gene-ACYKK2_000423;Name=ACYKK2_000423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000423 DBLQKW010000005.1 Protein Homology CDS 63288 63665 . + 0 ID=cds-HIH2231107.1;Parent=gene-ACYKK2_000423;Dbxref=NCBI_GP:HIH2231107.1;Name=HIH2231107.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF012264.6;locus_tag=ACYKK2_000423;product=c-type cytochrome;protein_id=HIH2231107.1;transl_table=11 DBLQKW010000005.1 tpg gene 63700 64341 . - . ID=gene-ACYKK2_000424;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=ACYKK2_000424 DBLQKW010000005.1 Protein Homology CDS 63700 64341 . - 0 ID=cds-HIH2231108.1;Parent=gene-ACYKK2_000424;Dbxref=NCBI_GP:HIH2231108.1;Name=HIH2231108.1;Ontology_term=GO:0015035;gbkey=CDS;gene=dsbA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344273.1;locus_tag=ACYKK2_000424;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=HIH2231108.1;transl_table=11 DBLQKW010000005.1 tpg gene 64425 64595 . - . ID=gene-ACYKK2_000425;Name=ACYKK2_000425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000425 DBLQKW010000005.1 GeneMarkS-2+ CDS 64425 64595 . - 0 ID=cds-HIH2231109.1;Parent=gene-ACYKK2_000425;Dbxref=NCBI_GP:HIH2231109.1;Name=HIH2231109.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_000425;product=hypothetical protein;protein_id=HIH2231109.1;transl_table=11 DBLQKW010000005.1 tpg gene 64690 64974 . - . ID=gene-ACYKK2_000426;Name=ACYKK2_000426;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000426 DBLQKW010000005.1 Protein Homology CDS 64690 64974 . - 0 ID=cds-HIH2231110.1;Parent=gene-ACYKK2_000426;Dbxref=NCBI_GP:HIH2231110.1;Name=HIH2231110.1;Ontology_term=GO:0004062;gbkey=CDS;go_function=aryl sulfotransferase activity|0004062||IEA;inference=COORDINATES: protein motif:HMM:NF017722.6;locus_tag=ACYKK2_000426;product=aryl-sulfate sulfotransferase;protein_id=HIH2231110.1;transl_table=11 DBLQKW010000005.1 tpg gene 65066 65218 . - . ID=gene-ACYKK2_000427;Name=ACYKK2_000427;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000427 DBLQKW010000005.1 Protein Homology CDS 65066 65218 . - 0 ID=cds-HIH2231111.1;Parent=gene-ACYKK2_000427;Dbxref=NCBI_GP:HIH2231111.1;Name=HIH2231111.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017722.6;locus_tag=ACYKK2_000427;product=hypothetical protein;protein_id=HIH2231111.1;transl_table=11 DBLQKW010000005.1 tpg gene 65446 65577 . - . ID=gene-ACYKK2_000428;Name=ACYKK2_000428;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000428 DBLQKW010000005.1 GeneMarkS-2+ CDS 65446 65577 . - 0 ID=cds-HIH2231112.1;Parent=gene-ACYKK2_000428;Dbxref=NCBI_GP:HIH2231112.1;Name=HIH2231112.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_000428;product=hypothetical protein;protein_id=HIH2231112.1;transl_table=11 DBLQKW010000005.1 tpg gene 65663 65842 . - . ID=gene-ACYKK2_000429;Name=ACYKK2_000429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000429 DBLQKW010000005.1 GeneMarkS-2+ CDS 65663 65842 . - 0 ID=cds-HIH2231113.1;Parent=gene-ACYKK2_000429;Dbxref=NCBI_GP:HIH2231113.1;Name=HIH2231113.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_000429;product=aryl-sulfate sulfotransferase N-terminal domain-containing protein;protein_id=HIH2231113.1;transl_table=11 DBLQKW010000005.1 tpg gene 65898 66698 . - . ID=gene-ACYKK2_000430;Name=dsbI;gbkey=Gene;gene=dsbI;gene_biotype=protein_coding;locus_tag=ACYKK2_000430 DBLQKW010000005.1 Protein Homology CDS 65898 66698 . - 0 ID=cds-HIH2231114.1;Parent=gene-ACYKK2_000430;Dbxref=NCBI_GP:HIH2231114.1;Name=HIH2231114.1;gbkey=CDS;gene=dsbI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344272.1;locus_tag=ACYKK2_000430;product=protein-disulfide oxidoreductase DsbI;protein_id=HIH2231114.1;transl_table=11 DBLQKW010000005.1 tpg gene 66695 67357 . - . ID=gene-ACYKK2_000431;Name=ACYKK2_000431;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000431 DBLQKW010000005.1 Protein Homology CDS 66695 67357 . - 0 ID=cds-HIH2231115.1;Parent=gene-ACYKK2_000431;Dbxref=NCBI_GP:HIH2231115.1;Name=HIH2231115.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002873066.1;locus_tag=ACYKK2_000431;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=HIH2231115.1;transl_table=11 ##sequence-region DBLQKW010000006.1 1 59706 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000006.1 tpg region 1 59706 . + . ID=DBLQKW010000006.1:1..59706;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000006.1 tpg gene 52 981 . + . ID=gene-ACYKK2_000432;Name=ACYKK2_000432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000432 DBLQKW010000006.1 Protein Homology CDS 52 981 . + 0 ID=cds-HIH2231116.1;Parent=gene-ACYKK2_000432;Dbxref=NCBI_GP:HIH2231116.1;Name=HIH2231116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343992.1;locus_tag=ACYKK2_000432;product=DUF2860 domain-containing protein;protein_id=HIH2231116.1;transl_table=11 DBLQKW010000006.1 tpg gene 1029 2357 . - . ID=gene-ACYKK2_000433;Name=ACYKK2_000433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000433 DBLQKW010000006.1 Protein Homology CDS 1029 2357 . - 0 ID=cds-HIH2231117.1;Parent=gene-ACYKK2_000433;Dbxref=NCBI_GP:HIH2231117.1;Name=HIH2231117.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343991.1;locus_tag=ACYKK2_000433;product=MATE family efflux transporter;protein_id=HIH2231117.1;transl_table=11 DBLQKW010000006.1 tpg gene 2538 3473 . - . ID=gene-ACYKK2_000434;Name=ACYKK2_000434;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000434 DBLQKW010000006.1 Protein Homology CDS 2538 3473 . - 0 ID=cds-HIH2231118.1;Parent=gene-ACYKK2_000434;Dbxref=NCBI_GP:HIH2231118.1;Name=HIH2231118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343990.1;locus_tag=ACYKK2_000434;product=NAD(P)-binding domain-containing protein;protein_id=HIH2231118.1;transl_table=11 DBLQKW010000006.1 tpg gene 3544 4776 . + . ID=gene-ACYKK2_000435;Name=ACYKK2_000435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000435 DBLQKW010000006.1 Protein Homology CDS 3544 4776 . + 0 ID=cds-HIH2231119.1;Parent=gene-ACYKK2_000435;Dbxref=NCBI_GP:HIH2231119.1;Name=HIH2231119.1;Ontology_term=GO:0006561,GO:0004350,GO:0016620;gbkey=CDS;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343989.1;locus_tag=ACYKK2_000435;product=glutamate-5-semialdehyde dehydrogenase;protein_id=HIH2231119.1;transl_table=11 DBLQKW010000006.1 tpg gene 4773 5858 . + . ID=gene-ACYKK2_000436;Name=ACYKK2_000436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000436 DBLQKW010000006.1 Protein Homology CDS 4773 5858 . + 0 ID=cds-HIH2231120.1;Parent=gene-ACYKK2_000436;Dbxref=NCBI_GP:HIH2231120.1;Name=HIH2231120.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343988.1;locus_tag=ACYKK2_000436;product=FUSC family protein;protein_id=HIH2231120.1;transl_table=11 DBLQKW010000006.1 tpg gene 5855 6652 . - . ID=gene-ACYKK2_000437;Name=ACYKK2_000437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000437 DBLQKW010000006.1 Protein Homology CDS 5855 6652 . - 0 ID=cds-HIH2231121.1;Parent=gene-ACYKK2_000437;Dbxref=NCBI_GP:HIH2231121.1;Name=HIH2231121.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343987.1;locus_tag=ACYKK2_000437;product=amidohydrolase family protein;protein_id=HIH2231121.1;transl_table=11 DBLQKW010000006.1 tpg gene 6663 7955 . - . ID=gene-ACYKK2_000438;Name=ACYKK2_000438;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000438 DBLQKW010000006.1 Protein Homology CDS 6663 7955 . - 0 ID=cds-HIH2231122.1;Parent=gene-ACYKK2_000438;Dbxref=NCBI_GP:HIH2231122.1;Name=HIH2231122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343986.1;locus_tag=ACYKK2_000438;product=SLC13 family permease;protein_id=HIH2231122.1;transl_table=11 DBLQKW010000006.1 tpg gene 8074 9078 . - . ID=gene-ACYKK2_000439;Name=ACYKK2_000439;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000439 DBLQKW010000006.1 Protein Homology CDS 8074 9078 . - 0 ID=cds-HIH2231123.1;Parent=gene-ACYKK2_000439;Dbxref=NCBI_GP:HIH2231123.1;Name=HIH2231123.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022646.6;locus_tag=ACYKK2_000439;product=DUF2891 domain-containing protein;protein_id=HIH2231123.1;transl_table=11 DBLQKW010000006.1 tpg gene 9088 10041 . - . ID=gene-ACYKK2_000440;Name=ACYKK2_000440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000440 DBLQKW010000006.1 Protein Homology CDS 9088 10041 . - 0 ID=cds-HIH2231124.1;Parent=gene-ACYKK2_000440;Dbxref=NCBI_GP:HIH2231124.1;Name=HIH2231124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343984.1;locus_tag=ACYKK2_000440;product=DUF979 domain-containing protein;protein_id=HIH2231124.1;transl_table=11 DBLQKW010000006.1 tpg gene 10028 10720 . - . ID=gene-ACYKK2_000441;Name=ACYKK2_000441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000441 DBLQKW010000006.1 Protein Homology CDS 10028 10720 . - 0 ID=cds-HIH2231125.1;Parent=gene-ACYKK2_000441;Dbxref=NCBI_GP:HIH2231125.1;Name=HIH2231125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343983.1;locus_tag=ACYKK2_000441;product=DUF969 domain-containing protein;protein_id=HIH2231125.1;transl_table=11 DBLQKW010000006.1 tpg gene 10878 11447 . - . ID=gene-ACYKK2_000442;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=ACYKK2_000442 DBLQKW010000006.1 Protein Homology CDS 10878 11447 . - 0 ID=cds-HIH2231126.1;Parent=gene-ACYKK2_000442;Dbxref=NCBI_GP:HIH2231126.1;Name=HIH2231126.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343982.1;locus_tag=ACYKK2_000442;product=elongation factor P;protein_id=HIH2231126.1;transl_table=11 DBLQKW010000006.1 tpg gene 11561 11881 . + . ID=gene-ACYKK2_000443;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=ACYKK2_000443 DBLQKW010000006.1 cmsearch RNase_P_RNA 11561 11881 . + . ID=rna-ACYKK2_000443;Parent=gene-ACYKK2_000443;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKK2_000443;product=RNase P RNA component class A DBLQKW010000006.1 cmsearch exon 11561 11881 . + . ID=exon-ACYKK2_000443-1;Parent=rna-ACYKK2_000443;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKK2_000443;product=RNase P RNA component class A DBLQKW010000006.1 tpg gene 11879 12154 . - . ID=gene-ACYKK2_000444;Name=ACYKK2_000444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000444 DBLQKW010000006.1 Protein Homology CDS 11879 12154 . - 0 ID=cds-HIH2231127.1;Parent=gene-ACYKK2_000444;Dbxref=NCBI_GP:HIH2231127.1;Name=HIH2231127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343981.1;locus_tag=ACYKK2_000444;product=hypothetical protein;protein_id=HIH2231127.1;transl_table=11 DBLQKW010000006.1 tpg gene 12135 12521 . - . ID=gene-ACYKK2_000445;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=ACYKK2_000445 DBLQKW010000006.1 Protein Homology CDS 12135 12521 . - 0 ID=cds-HIH2231128.1;Parent=gene-ACYKK2_000445;Dbxref=NCBI_GP:HIH2231128.1;Name=HIH2231128.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343980.1;locus_tag=ACYKK2_000445;product=flagellar export chaperone FliS;protein_id=HIH2231128.1;transl_table=11 DBLQKW010000006.1 tpg gene 12533 14461 . - . ID=gene-ACYKK2_000446;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=ACYKK2_000446 DBLQKW010000006.1 Protein Homology CDS 12533 14461 . - 0 ID=cds-HIH2231129.1;Parent=gene-ACYKK2_000446;Dbxref=NCBI_GP:HIH2231129.1;Name=HIH2231129.1;Ontology_term=GO:0007155,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343979.1;locus_tag=ACYKK2_000446;product=flagellar filament capping protein FliD;protein_id=HIH2231129.1;transl_table=11 DBLQKW010000006.1 tpg gene 14464 14829 . - . ID=gene-ACYKK2_000447;Name=ACYKK2_000447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000447 DBLQKW010000006.1 Protein Homology CDS 14464 14829 . - 0 ID=cds-HIH2231130.1;Parent=gene-ACYKK2_000447;Dbxref=NCBI_GP:HIH2231130.1;Name=HIH2231130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343978.1;locus_tag=ACYKK2_000447;product=FlaG family protein;protein_id=HIH2231130.1;transl_table=11 DBLQKW010000006.1 tpg gene 14985 16787 . - . ID=gene-ACYKK2_000448;Name=ACYKK2_000448;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000448 DBLQKW010000006.1 Protein Homology CDS 14985 16787 . - 0 ID=cds-HIH2231131.1;Parent=gene-ACYKK2_000448;Dbxref=NCBI_GP:HIH2231131.1;Name=HIH2231131.1;Ontology_term=GO:0009234,GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343977.1;locus_tag=ACYKK2_000448;product=menaquinone biosynthesis decarboxylase;protein_id=HIH2231131.1;transl_table=11 DBLQKW010000006.1 tpg gene 16784 17707 . - . ID=gene-ACYKK2_000449;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=ACYKK2_000449 DBLQKW010000006.1 Protein Homology CDS 16784 17707 . - 0 ID=cds-HIH2231132.1;Parent=gene-ACYKK2_000449;Dbxref=NCBI_GP:HIH2231132.1;Name=HIH2231132.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343976.1;locus_tag=ACYKK2_000449;product=hydroxymethylbilane synthase;protein_id=HIH2231132.1;transl_table=11 DBLQKW010000006.1 tpg gene 17704 18093 . - . ID=gene-ACYKK2_000450;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=ACYKK2_000450 DBLQKW010000006.1 Protein Homology CDS 17704 18093 . - 0 ID=cds-HIH2231133.1;Parent=gene-ACYKK2_000450;Dbxref=NCBI_GP:HIH2231133.1;Name=HIH2231133.1;gbkey=CDS;gene=fxsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343975.1;locus_tag=ACYKK2_000450;product=FxsA family membrane protein;protein_id=HIH2231133.1;transl_table=11 DBLQKW010000006.1 tpg gene 18090 19799 . - . ID=gene-ACYKK2_000451;Name=ACYKK2_000451;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000451 DBLQKW010000006.1 Protein Homology CDS 18090 19799 . - 0 ID=cds-HIH2231134.1;Parent=gene-ACYKK2_000451;Dbxref=NCBI_GP:HIH2231134.1;Name=HIH2231134.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA deacylase activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343974.1;locus_tag=ACYKK2_000451;product=proline--tRNA ligase;protein_id=HIH2231134.1;transl_table=11 DBLQKW010000006.1 tpg gene 19783 21081 . - . ID=gene-ACYKK2_000452;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=ACYKK2_000452 DBLQKW010000006.1 Protein Homology CDS 19783 21081 . - 0 ID=cds-HIH2231135.1;Parent=gene-ACYKK2_000452;Dbxref=NCBI_GP:HIH2231135.1;Name=HIH2231135.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343973.1;locus_tag=ACYKK2_000452;product=glutamyl-tRNA reductase;protein_id=HIH2231135.1;transl_table=11 DBLQKW010000006.1 tpg gene 21081 21974 . - . ID=gene-ACYKK2_000453;Name=ACYKK2_000453;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000453 DBLQKW010000006.1 Protein Homology CDS 21081 21974 . - 0 ID=cds-HIH2231136.1;Parent=gene-ACYKK2_000453;Dbxref=NCBI_GP:HIH2231136.1;Name=HIH2231136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343972.1;locus_tag=ACYKK2_000453;product=hexaprenyl-diphosphate synthase;protein_id=HIH2231136.1;transl_table=11 DBLQKW010000006.1 tpg gene 21988 22524 . - . ID=gene-ACYKK2_000454;Name=ACYKK2_000454;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000454 DBLQKW010000006.1 Protein Homology CDS 21988 22524 . - 0 ID=cds-HIH2231137.1;Parent=gene-ACYKK2_000454;Dbxref=NCBI_GP:HIH2231137.1;Name=HIH2231137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343971.1;locus_tag=ACYKK2_000454;product=exporting protein;protein_id=HIH2231137.1;transl_table=11 DBLQKW010000006.1 tpg gene 22527 22790 . - . ID=gene-ACYKK2_000455;Name=ACYKK2_000455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000455 DBLQKW010000006.1 Protein Homology CDS 22527 22790 . - 0 ID=cds-HIH2231138.1;Parent=gene-ACYKK2_000455;Dbxref=NCBI_GP:HIH2231138.1;Name=HIH2231138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343970.1;locus_tag=ACYKK2_000455;product=DUF2018 family protein;protein_id=HIH2231138.1;transl_table=11 DBLQKW010000006.1 tpg gene 22929 23486 . - . ID=gene-ACYKK2_000456;Name=ACYKK2_000456;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000456 DBLQKW010000006.1 Protein Homology CDS 22929 23486 . - 0 ID=cds-HIH2231139.1;Parent=gene-ACYKK2_000456;Dbxref=NCBI_GP:HIH2231139.1;Name=HIH2231139.1;Ontology_term=GO:0016903;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343969.1;locus_tag=ACYKK2_000456;product=2-oxoacid:acceptor oxidoreductase family protein;protein_id=HIH2231139.1;transl_table=11 DBLQKW010000006.1 tpg gene 23483 24328 . - . ID=gene-ACYKK2_000457;Name=ACYKK2_000457;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000457 DBLQKW010000006.1 Protein Homology CDS 23483 24328 . - 0 ID=cds-HIH2231140.1;Parent=gene-ACYKK2_000457;Dbxref=NCBI_GP:HIH2231140.1;Name=HIH2231140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343968.1;locus_tag=ACYKK2_000457;product=2-oxoglutarate ferredoxin oxidoreductase subunit beta;protein_id=HIH2231140.1;transl_table=11 DBLQKW010000006.1 tpg gene 24329 25453 . - . ID=gene-ACYKK2_000458;Name=ACYKK2_000458;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000458 DBLQKW010000006.1 Protein Homology CDS 24329 25453 . - 0 ID=cds-HIH2231141.1;Parent=gene-ACYKK2_000458;Dbxref=NCBI_GP:HIH2231141.1;Name=HIH2231141.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343967.1;locus_tag=ACYKK2_000458;product=2-oxoglutarate synthase subunit alpha;protein_id=HIH2231141.1;transl_table=11 DBLQKW010000006.1 tpg gene 25462 25773 . - . ID=gene-ACYKK2_000459;Name=ACYKK2_000459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000459 DBLQKW010000006.1 Protein Homology CDS 25462 25773 . - 0 ID=cds-HIH2231142.1;Parent=gene-ACYKK2_000459;Dbxref=NCBI_GP:HIH2231142.1;Name=HIH2231142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343966.1;locus_tag=ACYKK2_000459;product=4Fe-4S dicluster domain-containing protein;protein_id=HIH2231142.1;transl_table=11 DBLQKW010000006.1 tpg gene 25787 26656 . - . ID=gene-ACYKK2_000460;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=ACYKK2_000460 DBLQKW010000006.1 Protein Homology CDS 25787 26656 . - 0 ID=cds-HIH2231143.1;Parent=gene-ACYKK2_000460;Dbxref=NCBI_GP:HIH2231143.1;Name=HIH2231143.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343965.1;locus_tag=ACYKK2_000460;product=succinate--CoA ligase subunit alpha;protein_id=HIH2231143.1;transl_table=11 DBLQKW010000006.1 tpg gene 26666 27829 . - . ID=gene-ACYKK2_000461;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=ACYKK2_000461 DBLQKW010000006.1 Protein Homology CDS 26666 27829 . - 0 ID=cds-HIH2231144.1;Parent=gene-ACYKK2_000461;Dbxref=NCBI_GP:HIH2231144.1;Name=HIH2231144.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343964.1;locus_tag=ACYKK2_000461;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=HIH2231144.1;transl_table=11 DBLQKW010000006.1 tpg gene 27830 28732 . - . ID=gene-ACYKK2_000462;Name=ACYKK2_000462;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000462 DBLQKW010000006.1 Protein Homology CDS 27830 28732 . - 0 ID=cds-HIH2231145.1;Parent=gene-ACYKK2_000462;Dbxref=NCBI_GP:HIH2231145.1;Name=HIH2231145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343963.1;locus_tag=ACYKK2_000462;product=malate dehydrogenase;protein_id=HIH2231145.1;transl_table=11 DBLQKW010000006.1 tpg gene 28729 30933 . - . ID=gene-ACYKK2_000463;Name=ACYKK2_000463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000463 DBLQKW010000006.1 Protein Homology CDS 28729 30933 . - 0 ID=cds-HIH2231146.1;Parent=gene-ACYKK2_000463;Dbxref=NCBI_GP:HIH2231146.1;Name=HIH2231146.1;Ontology_term=GO:0006099,GO:0004450;gbkey=CDS;go_function=isocitrate dehydrogenase (NADP+) activity|0004450||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343962.1;locus_tag=ACYKK2_000463;product=NADP-dependent isocitrate dehydrogenase;protein_id=HIH2231146.1;transl_table=11 DBLQKW010000006.1 tpg gene 31050 33620 . - . ID=gene-ACYKK2_000464;Name=ACYKK2_000464;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000464 DBLQKW010000006.1 Protein Homology CDS 31050 33620 . - 0 ID=cds-HIH2231147.1;Parent=gene-ACYKK2_000464;Dbxref=NCBI_GP:HIH2231147.1;Name=HIH2231147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343961.1;locus_tag=ACYKK2_000464;product=AsmA-like C-terminal domain-containing protein;protein_id=HIH2231147.1;transl_table=11 DBLQKW010000006.1 tpg gene 33535 34536 . + . ID=gene-ACYKK2_000465;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=ACYKK2_000465 DBLQKW010000006.1 Protein Homology CDS 33535 34536 . + 0 ID=cds-HIH2231148.1;Parent=gene-ACYKK2_000465;Dbxref=NCBI_GP:HIH2231148.1;Name=HIH2231148.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343960.1;locus_tag=ACYKK2_000465;product=endolytic transglycosylase MltG;protein_id=HIH2231148.1;transl_table=11 DBLQKW010000006.1 tpg gene 34617 35048 . + . ID=gene-ACYKK2_000466;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=ACYKK2_000466 DBLQKW010000006.1 Protein Homology CDS 34617 35048 . + 0 ID=cds-HIH2231149.1;Parent=gene-ACYKK2_000466;Dbxref=NCBI_GP:HIH2231149.1;Name=HIH2231149.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343959.1;locus_tag=ACYKK2_000466;product=flagellar basal body rod protein FlgB;protein_id=HIH2231149.1;transl_table=11 DBLQKW010000006.1 tpg gene 35058 35552 . + . ID=gene-ACYKK2_000467;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=ACYKK2_000467 DBLQKW010000006.1 Protein Homology CDS 35058 35552 . + 0 ID=cds-HIH2231150.1;Parent=gene-ACYKK2_000467;Dbxref=NCBI_GP:HIH2231150.1;Name=HIH2231150.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343958.1;locus_tag=ACYKK2_000467;product=flagellar basal body rod protein FlgC;protein_id=HIH2231150.1;transl_table=11 DBLQKW010000006.1 tpg gene 35559 35855 . + . ID=gene-ACYKK2_000468;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=ACYKK2_000468 DBLQKW010000006.1 Protein Homology CDS 35559 35855 . + 0 ID=cds-HIH2231151.1;Parent=gene-ACYKK2_000468;Dbxref=NCBI_GP:HIH2231151.1;Name=HIH2231151.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343957.1;locus_tag=ACYKK2_000468;product=flagellar hook-basal body complex protein FliE;protein_id=HIH2231151.1;transl_table=11 DBLQKW010000006.1 tpg gene 35862 37670 . + . ID=gene-ACYKK2_000469;Name=ACYKK2_000469;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000469 DBLQKW010000006.1 Protein Homology CDS 35862 37670 . + 0 ID=cds-HIH2231152.1;Parent=gene-ACYKK2_000469;Dbxref=NCBI_GP:HIH2231152.1;Name=HIH2231152.1;Ontology_term=GO:0009252,GO:0051301,GO:0071555,GO:0008658,GO:0008955,GO:0009002,GO:0016787,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343956.1;locus_tag=ACYKK2_000469;product=peptidoglycan D%2CD-transpeptidase FtsI family protein;protein_id=HIH2231152.1;transl_table=11 DBLQKW010000006.1 tpg pseudogene 37667 39435 . - . ID=gene-ACYKK2_000470;Name=ACYKK2_000470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_000470;pseudo=true DBLQKW010000006.1 Protein Homology CDS 37667 39435 . - 0 ID=cds-ACYKK2_000470;Parent=gene-ACYKK2_000470;Note=frameshifted;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002867673.1;locus_tag=ACYKK2_000470;product=Na/Pi cotransporter family protein;pseudo=true;transl_table=11 DBLQKW010000006.1 tpg gene 39439 39873 . - . ID=gene-ACYKK2_000471;Name=ACYKK2_000471;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000471 DBLQKW010000006.1 Protein Homology CDS 39439 39873 . - 0 ID=cds-HIH2231153.1;Parent=gene-ACYKK2_000471;Dbxref=NCBI_GP:HIH2231153.1;Name=HIH2231153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343952.1;locus_tag=ACYKK2_000471;product=hypothetical protein;protein_id=HIH2231153.1;transl_table=11 DBLQKW010000006.1 tpg gene 39873 40190 . - . ID=gene-ACYKK2_000472;Name=ACYKK2_000472;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000472 DBLQKW010000006.1 Protein Homology CDS 39873 40190 . - 0 ID=cds-HIH2231154.1;Parent=gene-ACYKK2_000472;Dbxref=NCBI_GP:HIH2231154.1;Name=HIH2231154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002854907.1;locus_tag=ACYKK2_000472;product=rhodanese-like domain-containing protein;protein_id=HIH2231154.1;transl_table=11 DBLQKW010000006.1 tpg gene 40187 42013 . - . ID=gene-ACYKK2_000473;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=ACYKK2_000473 DBLQKW010000006.1 Protein Homology CDS 40187 42013 . - 0 ID=cds-HIH2231155.1;Parent=gene-ACYKK2_000473;Dbxref=NCBI_GP:HIH2231155.1;Name=HIH2231155.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343950.1;locus_tag=ACYKK2_000473;product=molecular chaperone HtpG;protein_id=HIH2231155.1;transl_table=11 DBLQKW010000006.1 tpg gene 42086 42454 . - . ID=gene-ACYKK2_000474;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=ACYKK2_000474 DBLQKW010000006.1 Protein Homology CDS 42086 42454 . - 0 ID=cds-HIH2231156.1;Parent=gene-ACYKK2_000474;Dbxref=NCBI_GP:HIH2231156.1;Name=HIH2231156.1;Ontology_term=GO:1903424,GO:1903425,GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;go_function=fluoride transmembrane transporter activity|1903425||IEA;go_process=fluoride transmembrane transport|1903424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343949.1;locus_tag=ACYKK2_000474;product=fluoride efflux transporter CrcB;protein_id=HIH2231156.1;transl_table=11 DBLQKW010000006.1 tpg gene 42448 43140 . - . ID=gene-ACYKK2_000475;Name=ACYKK2_000475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000475 DBLQKW010000006.1 Protein Homology CDS 42448 43140 . - 0 ID=cds-HIH2231157.1;Parent=gene-ACYKK2_000475;Dbxref=NCBI_GP:HIH2231157.1;Name=HIH2231157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343948.1;locus_tag=ACYKK2_000475;product=lysophospholipid acyltransferase family protein;protein_id=HIH2231157.1;transl_table=11 DBLQKW010000006.1 tpg gene 43121 44317 . - . ID=gene-ACYKK2_000476;Name=ACYKK2_000476;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000476 DBLQKW010000006.1 Protein Homology CDS 43121 44317 . - 0 ID=cds-HIH2231158.1;Parent=gene-ACYKK2_000476;Dbxref=NCBI_GP:HIH2231158.1;Name=HIH2231158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343947.1;locus_tag=ACYKK2_000476;product=SH3 domain-containing protein;protein_id=HIH2231158.1;transl_table=11 DBLQKW010000006.1 tpg pseudogene 44289 44961 . - . ID=gene-ACYKK2_000477;Name=purQ;gbkey=Gene;gene=purQ;gene_biotype=pseudogene;locus_tag=ACYKK2_000477;pseudo=true DBLQKW010000006.1 Protein Homology CDS 44289 44961 . - 0 ID=cds-ACYKK2_000477;Parent=gene-ACYKK2_000477;Note=frameshifted;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purQ;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343946.1;locus_tag=ACYKK2_000477;product=phosphoribosylformylglycinamidine synthase I;pseudo=true;transl_table=11 DBLQKW010000006.1 tpg gene 44963 45208 . - . ID=gene-ACYKK2_000478;Name=purS;gbkey=Gene;gene=purS;gene_biotype=protein_coding;locus_tag=ACYKK2_000478 DBLQKW010000006.1 Protein Homology CDS 44963 45208 . - 0 ID=cds-HIH2231159.1;Parent=gene-ACYKK2_000478;Dbxref=NCBI_GP:HIH2231159.1;Name=HIH2231159.1;Ontology_term=GO:0009152,GO:0004642;gbkey=CDS;gene=purS;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343945.1;locus_tag=ACYKK2_000478;product=phosphoribosylformylglycinamidine synthase subunit PurS;protein_id=HIH2231159.1;transl_table=11 DBLQKW010000006.1 tpg gene 45217 45927 . - . ID=gene-ACYKK2_000479;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=ACYKK2_000479 DBLQKW010000006.1 Protein Homology CDS 45217 45927 . - 0 ID=cds-HIH2231160.1;Parent=gene-ACYKK2_000479;Dbxref=NCBI_GP:HIH2231160.1;Name=HIH2231160.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343944.1;locus_tag=ACYKK2_000479;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=HIH2231160.1;transl_table=11 DBLQKW010000006.1 tpg gene 45929 47263 . - . ID=gene-ACYKK2_000480;Name=ACYKK2_000480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000480 DBLQKW010000006.1 Protein Homology CDS 45929 47263 . - 0 ID=cds-HIH2231161.1;Parent=gene-ACYKK2_000480;Dbxref=NCBI_GP:HIH2231161.1;Name=HIH2231161.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343943.1;locus_tag=ACYKK2_000480;product=S41 family peptidase;protein_id=HIH2231161.1;transl_table=11 DBLQKW010000006.1 tpg gene 47390 47680 . + . ID=gene-ACYKK2_000481;Name=ACYKK2_000481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000481 DBLQKW010000006.1 Protein Homology CDS 47390 47680 . + 0 ID=cds-HIH2231162.1;Parent=gene-ACYKK2_000481;Dbxref=NCBI_GP:HIH2231162.1;Name=HIH2231162.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343942.1;locus_tag=ACYKK2_000481;product=metal-sensing transcriptional repressor;protein_id=HIH2231162.1;transl_table=11 DBLQKW010000006.1 tpg gene 47792 50365 . + . ID=gene-ACYKK2_000482;Name=ACYKK2_000482;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000482 DBLQKW010000006.1 Protein Homology CDS 47792 50365 . + 0 ID=cds-HIH2231163.1;Parent=gene-ACYKK2_000482;Dbxref=NCBI_GP:HIH2231163.1;Name=HIH2231163.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343941.1;locus_tag=ACYKK2_000482;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=HIH2231163.1;transl_table=11 DBLQKW010000006.1 tpg gene 50393 52324 . - . ID=gene-ACYKK2_000483;Name=ACYKK2_000483;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000483 DBLQKW010000006.1 Protein Homology CDS 50393 52324 . - 0 ID=cds-HIH2231164.1;Parent=gene-ACYKK2_000483;Dbxref=NCBI_GP:HIH2231164.1;Name=HIH2231164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343940.1;locus_tag=ACYKK2_000483;product=penicillin-binding protein 1A;protein_id=HIH2231164.1;transl_table=11 DBLQKW010000006.1 tpg gene 52321 52872 . - . ID=gene-ACYKK2_000484;Name=maf;gbkey=Gene;gene=maf;gene_biotype=protein_coding;locus_tag=ACYKK2_000484 DBLQKW010000006.1 Protein Homology CDS 52321 52872 . - 0 ID=cds-HIH2231165.1;Parent=gene-ACYKK2_000484;Dbxref=NCBI_GP:HIH2231165.1;Name=HIH2231165.1;Ontology_term=GO:0047429;gbkey=CDS;gene=maf;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343939.1;locus_tag=ACYKK2_000484;product=septum formation inhibitor Maf;protein_id=HIH2231165.1;transl_table=11 DBLQKW010000006.1 tpg gene 52872 55400 . - . ID=gene-ACYKK2_000485;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=ACYKK2_000485 DBLQKW010000006.1 Protein Homology CDS 52872 55400 . - 0 ID=cds-HIH2231166.1;Parent=gene-ACYKK2_000485;Dbxref=NCBI_GP:HIH2231166.1;Name=HIH2231166.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343938.1;locus_tag=ACYKK2_000485;product=alanine--tRNA ligase;protein_id=HIH2231166.1;transl_table=11 DBLQKW010000006.1 tpg gene 55515 56588 . + . ID=gene-ACYKK2_000486;Name=ACYKK2_000486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000486 DBLQKW010000006.1 Protein Homology CDS 55515 56588 . + 0 ID=cds-HIH2231167.1;Parent=gene-ACYKK2_000486;Dbxref=NCBI_GP:HIH2231167.1;Name=HIH2231167.1;Ontology_term=GO:0008483;gbkey=CDS;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343937.1;locus_tag=ACYKK2_000486;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=HIH2231167.1;transl_table=11 DBLQKW010000006.1 tpg gene 56593 57459 . + . ID=gene-ACYKK2_000487;Name=ACYKK2_000487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000487 DBLQKW010000006.1 Protein Homology CDS 56593 57459 . + 0 ID=cds-HIH2231168.1;Parent=gene-ACYKK2_000487;Dbxref=NCBI_GP:HIH2231168.1;Name=HIH2231168.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343936.1;locus_tag=ACYKK2_000487;product=Gfo/Idh/MocA family protein;protein_id=HIH2231168.1;transl_table=11 DBLQKW010000006.1 tpg gene 57456 58367 . + . ID=gene-ACYKK2_000488;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=ACYKK2_000488 DBLQKW010000006.1 Protein Homology CDS 57456 58367 . + 0 ID=cds-HIH2231169.1;Parent=gene-ACYKK2_000488;Dbxref=NCBI_GP:HIH2231169.1;Name=HIH2231169.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343935.1;locus_tag=ACYKK2_000488;product=ferrochelatase;protein_id=HIH2231169.1;transl_table=11 DBLQKW010000006.1 tpg gene 58427 59662 . - . ID=gene-ACYKK2_000489;Name=ACYKK2_000489;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000489 DBLQKW010000006.1 Protein Homology CDS 58427 59662 . - 0 ID=cds-HIH2231170.1;Parent=gene-ACYKK2_000489;Dbxref=NCBI_GP:HIH2231170.1;Name=HIH2231170.1;Ontology_term=GO:0072488,GO:0008519,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002780812.1;locus_tag=ACYKK2_000489;product=ammonium transporter;protein_id=HIH2231170.1;transl_table=11 ##sequence-region DBLQKW010000007.1 1 58837 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000007.1 tpg region 1 58837 . + . ID=DBLQKW010000007.1:1..58837;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000007.1 tpg gene 27 3515 . + . ID=gene-ACYKK2_000490;Name=ACYKK2_000490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000490 DBLQKW010000007.1 Protein Homology CDS 27 3515 . + 0 ID=cds-HIH2231171.1;Parent=gene-ACYKK2_000490;Dbxref=NCBI_GP:HIH2231171.1;Name=HIH2231171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344882.1;locus_tag=ACYKK2_000490;product=proline dehydrogenase family protein;protein_id=HIH2231171.1;transl_table=11 DBLQKW010000007.1 tpg gene 3533 5002 . + . ID=gene-ACYKK2_000491;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=ACYKK2_000491 DBLQKW010000007.1 Protein Homology CDS 3533 5002 . + 0 ID=cds-HIH2231172.1;Parent=gene-ACYKK2_000491;Dbxref=NCBI_GP:HIH2231172.1;Name=HIH2231172.1;Ontology_term=GO:0006814,GO:0015824,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002856275.1;locus_tag=ACYKK2_000491;product=sodium/proline symporter PutP;protein_id=HIH2231172.1;transl_table=11 DBLQKW010000007.1 tpg gene 5018 5245 . - . ID=gene-ACYKK2_000492;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=ACYKK2_000492 DBLQKW010000007.1 Protein Homology CDS 5018 5245 . - 0 ID=cds-HIH2231173.1;Parent=gene-ACYKK2_000492;Dbxref=NCBI_GP:HIH2231173.1;Name=HIH2231173.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344880.1;locus_tag=ACYKK2_000492;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=HIH2231173.1;transl_table=11 DBLQKW010000007.1 tpg gene 5249 6457 . - . ID=gene-ACYKK2_000493;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=ACYKK2_000493 DBLQKW010000007.1 Protein Homology CDS 5249 6457 . - 0 ID=cds-HIH2231174.1;Parent=gene-ACYKK2_000493;Dbxref=NCBI_GP:HIH2231174.1;Name=HIH2231174.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344879.1;locus_tag=ACYKK2_000493;product=selenium metabolism membrane protein YedE/FdhT;protein_id=HIH2231174.1;transl_table=11 DBLQKW010000007.1 tpg gene 6597 6694 . + . ID=gene-ACYKK2_000494;Name=ACYKK2_000494;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_000494 DBLQKW010000007.1 tRNAscan-SE tRNA 6597 6694 . + . ID=rna-ACYKK2_000494;Parent=gene-ACYKK2_000494;anticodon=(pos:6631..6633);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_000494;product=tRNA-Sec DBLQKW010000007.1 tRNAscan-SE exon 6597 6694 . + . ID=exon-ACYKK2_000494-1;Parent=rna-ACYKK2_000494;anticodon=(pos:6631..6633);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_000494;product=tRNA-Sec DBLQKW010000007.1 tpg gene 6722 7972 . + . ID=gene-ACYKK2_000495;Name=ACYKK2_000495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000495 DBLQKW010000007.1 Protein Homology CDS 6722 7972 . + 0 ID=cds-HIH2231175.1;Parent=gene-ACYKK2_000495;Dbxref=NCBI_GP:HIH2231175.1;Name=HIH2231175.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344878.1;locus_tag=ACYKK2_000495;product=adenylosuccinate synthase;protein_id=HIH2231175.1;transl_table=11 DBLQKW010000007.1 tpg gene 7969 8397 . + . ID=gene-ACYKK2_000496;Name=ACYKK2_000496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000496 DBLQKW010000007.1 Protein Homology CDS 7969 8397 . + 0 ID=cds-HIH2231176.1;Parent=gene-ACYKK2_000496;Dbxref=NCBI_GP:HIH2231176.1;Name=HIH2231176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344877.1;locus_tag=ACYKK2_000496;product=flagellar export protein FliJ;protein_id=HIH2231176.1;transl_table=11 DBLQKW010000007.1 tpg gene 8390 8908 . + . ID=gene-ACYKK2_000497;Name=ACYKK2_000497;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000497 DBLQKW010000007.1 Protein Homology CDS 8390 8908 . + 0 ID=cds-HIH2231177.1;Parent=gene-ACYKK2_000497;Dbxref=NCBI_GP:HIH2231177.1;Name=HIH2231177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344876.1;locus_tag=ACYKK2_000497;product=MotE family protein;protein_id=HIH2231177.1;transl_table=11 DBLQKW010000007.1 tpg gene 9001 9552 . + . ID=gene-ACYKK2_000498;Name=ACYKK2_000498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000498 DBLQKW010000007.1 Protein Homology CDS 9001 9552 . + 0 ID=cds-HIH2231178.1;Parent=gene-ACYKK2_000498;Dbxref=NCBI_GP:HIH2231178.1;Name=HIH2231178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344875.1;locus_tag=ACYKK2_000498;product=DUF507 family protein;protein_id=HIH2231178.1;transl_table=11 DBLQKW010000007.1 tpg gene 9552 10670 . + . ID=gene-ACYKK2_000499;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=ACYKK2_000499 DBLQKW010000007.1 Protein Homology CDS 9552 10670 . + 0 ID=cds-HIH2231179.1;Parent=gene-ACYKK2_000499;Dbxref=NCBI_GP:HIH2231179.1;Name=HIH2231179.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344874.1;locus_tag=ACYKK2_000499;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=HIH2231179.1;transl_table=11 DBLQKW010000007.1 tpg gene 10667 11326 . + . ID=gene-ACYKK2_000500;Name=ACYKK2_000500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000500 DBLQKW010000007.1 Protein Homology CDS 10667 11326 . + 0 ID=cds-HIH2231180.1;Parent=gene-ACYKK2_000500;Dbxref=NCBI_GP:HIH2231180.1;Name=HIH2231180.1;Ontology_term=GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344873.1;locus_tag=ACYKK2_000500;product=sulfite exporter TauE/SafE family protein;protein_id=HIH2231180.1;transl_table=11 DBLQKW010000007.1 tpg gene 11323 12534 . + . ID=gene-ACYKK2_000501;Name=bumS;gbkey=Gene;gene=bumS;gene_biotype=protein_coding;locus_tag=ACYKK2_000501 DBLQKW010000007.1 Protein Homology CDS 11323 12534 . + 0 ID=cds-HIH2231181.1;Parent=gene-ACYKK2_000501;Dbxref=NCBI_GP:HIH2231181.1;Name=HIH2231181.1;gbkey=CDS;gene=bumS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344872.1;locus_tag=ACYKK2_000501;product=butyrate sensor histidiine kinase-like phosphatase BumS;protein_id=HIH2231181.1;transl_table=11 DBLQKW010000007.1 tpg gene 12537 13217 . + . ID=gene-ACYKK2_000502;Name=bumR;gbkey=Gene;gene=bumR;gene_biotype=protein_coding;locus_tag=ACYKK2_000502 DBLQKW010000007.1 Protein Homology CDS 12537 13217 . + 0 ID=cds-HIH2231182.1;Parent=gene-ACYKK2_000502;Dbxref=NCBI_GP:HIH2231182.1;Name=HIH2231182.1;gbkey=CDS;gene=bumR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344871.1;locus_tag=ACYKK2_000502;product=butyrate response regulator transcription factor BumR;protein_id=HIH2231182.1;transl_table=11 DBLQKW010000007.1 tpg gene 13343 14809 . + . ID=gene-ACYKK2_000503;Name=ccoN;gbkey=Gene;gene=ccoN;gene_biotype=protein_coding;locus_tag=ACYKK2_000503 DBLQKW010000007.1 Protein Homology CDS 13343 14809 . + 0 ID=cds-HIH2231183.1;Parent=gene-ACYKK2_000503;Dbxref=NCBI_GP:HIH2231183.1;Name=HIH2231183.1;Ontology_term=GO:0004129,GO:0045277;gbkey=CDS;gene=ccoN;go_component=respiratory chain complex IV|0045277||IEA;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344870.1;locus_tag=ACYKK2_000503;product=cytochrome-c oxidase%2C cbb3-type subunit I;protein_id=HIH2231183.1;transl_table=11 DBLQKW010000007.1 tpg gene 14822 15487 . + . ID=gene-ACYKK2_000504;Name=ccoO;gbkey=Gene;gene=ccoO;gene_biotype=protein_coding;locus_tag=ACYKK2_000504 DBLQKW010000007.1 Protein Homology CDS 14822 15487 . + 0 ID=cds-HIH2231184.1;Parent=gene-ACYKK2_000504;Dbxref=NCBI_GP:HIH2231184.1;Name=HIH2231184.1;Ontology_term=GO:0004129;gbkey=CDS;gene=ccoO;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344869.1;locus_tag=ACYKK2_000504;product=cytochrome-c oxidase%2C cbb3-type subunit II;protein_id=HIH2231184.1;transl_table=11 DBLQKW010000007.1 tpg gene 15492 15755 . + . ID=gene-ACYKK2_000505;Name=ACYKK2_000505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000505 DBLQKW010000007.1 Protein Homology CDS 15492 15755 . + 0 ID=cds-HIH2231185.1;Parent=gene-ACYKK2_000505;Dbxref=NCBI_GP:HIH2231185.1;Name=HIH2231185.1;Ontology_term=GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344868.1;locus_tag=ACYKK2_000505;product=cytochrome c oxidase%2C cbb3-type%2C CcoQ subunit;protein_id=HIH2231185.1;transl_table=11 DBLQKW010000007.1 tpg gene 15755 16618 . + . ID=gene-ACYKK2_000506;Name=ACYKK2_000506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000506 DBLQKW010000007.1 Protein Homology CDS 15755 16618 . + 0 ID=cds-HIH2231186.1;Parent=gene-ACYKK2_000506;Dbxref=NCBI_GP:HIH2231186.1;Name=HIH2231186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344867.1;locus_tag=ACYKK2_000506;product=cbb3-type cytochrome c oxidase N-terminal domain-containing protein;protein_id=HIH2231186.1;transl_table=11 DBLQKW010000007.1 tpg gene 16615 16836 . + . ID=gene-ACYKK2_000507;Name=ACYKK2_000507;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000507 DBLQKW010000007.1 Protein Homology CDS 16615 16836 . + 0 ID=cds-HIH2231187.1;Parent=gene-ACYKK2_000507;Dbxref=NCBI_GP:HIH2231187.1;Name=HIH2231187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344866.1;locus_tag=ACYKK2_000507;product=DUF4006 family protein;protein_id=HIH2231187.1;transl_table=11 DBLQKW010000007.1 tpg gene 16833 16934 . + . ID=gene-ACYKK2_000508;Name=ACYKK2_000508;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000508 DBLQKW010000007.1 Protein Homology CDS 16833 16934 . + 0 ID=cds-HIH2231188.1;Parent=gene-ACYKK2_000508;Dbxref=NCBI_GP:HIH2231188.1;Name=HIH2231188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344865.1;locus_tag=ACYKK2_000508;product=hypothetical protein;protein_id=HIH2231188.1;transl_table=11 DBLQKW010000007.1 tpg gene 16931 17533 . + . ID=gene-ACYKK2_000509;Name=ACYKK2_000509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000509 DBLQKW010000007.1 Protein Homology CDS 16931 17533 . + 0 ID=cds-HIH2231189.1;Parent=gene-ACYKK2_000509;Dbxref=NCBI_GP:HIH2231189.1;Name=HIH2231189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344864.1;locus_tag=ACYKK2_000509;product=hypothetical protein;protein_id=HIH2231189.1;transl_table=11 DBLQKW010000007.1 tpg gene 17520 18041 . + . ID=gene-ACYKK2_000510;Name=ACYKK2_000510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000510 DBLQKW010000007.1 Protein Homology CDS 17520 18041 . + 0 ID=cds-HIH2231190.1;Parent=gene-ACYKK2_000510;Dbxref=NCBI_GP:HIH2231190.1;Name=HIH2231190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344863.1;locus_tag=ACYKK2_000510;product=FixH family protein;protein_id=HIH2231190.1;transl_table=11 DBLQKW010000007.1 tpg gene 18038 20404 . + . ID=gene-ACYKK2_000511;Name=ACYKK2_000511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000511 DBLQKW010000007.1 Protein Homology CDS 18038 20404 . + 0 ID=cds-HIH2231191.1;Parent=gene-ACYKK2_000511;Dbxref=NCBI_GP:HIH2231191.1;Name=HIH2231191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344862.1;locus_tag=ACYKK2_000511;product=PD-(D/E)XK nuclease family protein;protein_id=HIH2231191.1;transl_table=11 DBLQKW010000007.1 tpg gene 20401 23166 . + . ID=gene-ACYKK2_000512;Name=ACYKK2_000512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000512 DBLQKW010000007.1 Protein Homology CDS 20401 23166 . + 0 ID=cds-HIH2231192.1;Parent=gene-ACYKK2_000512;Dbxref=NCBI_GP:HIH2231192.1;Name=HIH2231192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344861.1;locus_tag=ACYKK2_000512;product=RecB-like helicase;protein_id=HIH2231192.1;transl_table=11 DBLQKW010000007.1 tpg gene 23250 23675 . + . ID=gene-ACYKK2_000513;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=ACYKK2_000513 DBLQKW010000007.1 Protein Homology CDS 23250 23675 . + 0 ID=cds-HIH2231193.1;Parent=gene-ACYKK2_000513;Dbxref=NCBI_GP:HIH2231193.1;Name=HIH2231193.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344860.1;locus_tag=ACYKK2_000513;product=50S ribosomal protein L13;protein_id=HIH2231193.1;transl_table=11 DBLQKW010000007.1 tpg gene 23678 24067 . + . ID=gene-ACYKK2_000514;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=ACYKK2_000514 DBLQKW010000007.1 Protein Homology CDS 23678 24067 . + 0 ID=cds-HIH2231194.1;Parent=gene-ACYKK2_000514;Dbxref=NCBI_GP:HIH2231194.1;Name=HIH2231194.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344859.1;locus_tag=ACYKK2_000514;product=30S ribosomal protein S9;protein_id=HIH2231194.1;transl_table=11 DBLQKW010000007.1 tpg gene 24192 25151 . + . ID=gene-ACYKK2_000515;Name=cadF;gbkey=Gene;gene=cadF;gene_biotype=protein_coding;locus_tag=ACYKK2_000515 DBLQKW010000007.1 Protein Homology CDS 24192 25151 . + 0 ID=cds-HIH2231195.1;Parent=gene-ACYKK2_000515;Dbxref=NCBI_GP:HIH2231195.1;Name=HIH2231195.1;gbkey=CDS;gene=cadF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344858.1;locus_tag=ACYKK2_000515;product=fibronectin-binding outer membrane protein CadF;protein_id=HIH2231195.1;transl_table=11 DBLQKW010000007.1 tpg gene 25151 25792 . + . ID=gene-ACYKK2_000516;Name=ACYKK2_000516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000516 DBLQKW010000007.1 Protein Homology CDS 25151 25792 . + 0 ID=cds-HIH2231196.1;Parent=gene-ACYKK2_000516;Dbxref=NCBI_GP:HIH2231196.1;Name=HIH2231196.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344857.1;locus_tag=ACYKK2_000516;product=HAD family hydrolase;protein_id=HIH2231196.1;transl_table=11 DBLQKW010000007.1 tpg gene 25884 29444 . + . ID=gene-ACYKK2_000517;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=ACYKK2_000517 DBLQKW010000007.1 Protein Homology CDS 25884 29444 . + 0 ID=cds-HIH2231197.1;Parent=gene-ACYKK2_000517;Dbxref=NCBI_GP:HIH2231197.1;Name=HIH2231197.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344856.1;locus_tag=ACYKK2_000517;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=HIH2231197.1;transl_table=11 DBLQKW010000007.1 tpg gene 29468 29779 . + . ID=gene-ACYKK2_000518;Name=ACYKK2_000518;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000518 DBLQKW010000007.1 Protein Homology CDS 29468 29779 . + 0 ID=cds-HIH2231198.1;Parent=gene-ACYKK2_000518;Dbxref=NCBI_GP:HIH2231198.1;Name=HIH2231198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011990802.1;locus_tag=ACYKK2_000518;product=transformation system protein;protein_id=HIH2231198.1;transl_table=11 DBLQKW010000007.1 tpg gene 29757 31169 . + . ID=gene-ACYKK2_000519;Name=mshL;gbkey=Gene;gene=mshL;gene_biotype=protein_coding;locus_tag=ACYKK2_000519 DBLQKW010000007.1 Protein Homology CDS 29757 31169 . + 0 ID=cds-HIH2231199.1;Parent=gene-ACYKK2_000519;Dbxref=NCBI_GP:HIH2231199.1;Name=HIH2231199.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=mshL;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344854.1;locus_tag=ACYKK2_000519;product=pilus (MSHA type) biogenesis protein MshL;protein_id=HIH2231199.1;transl_table=11 DBLQKW010000007.1 tpg gene 31162 31770 . + . ID=gene-ACYKK2_000520;Name=ACYKK2_000520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000520 DBLQKW010000007.1 Protein Homology CDS 31162 31770 . + 0 ID=cds-HIH2231200.1;Parent=gene-ACYKK2_000520;Dbxref=NCBI_GP:HIH2231200.1;Name=HIH2231200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344853.1;locus_tag=ACYKK2_000520;product=ATP-binding protein;protein_id=HIH2231200.1;transl_table=11 DBLQKW010000007.1 tpg gene 31774 32361 . + . ID=gene-ACYKK2_000521;Name=ACYKK2_000521;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000521 DBLQKW010000007.1 Protein Homology CDS 31774 32361 . + 0 ID=cds-HIH2231201.1;Parent=gene-ACYKK2_000521;Dbxref=NCBI_GP:HIH2231201.1;Name=HIH2231201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344852.1;locus_tag=ACYKK2_000521;product=transformation system protein;protein_id=HIH2231201.1;transl_table=11 DBLQKW010000007.1 tpg gene 32351 33910 . + . ID=gene-ACYKK2_000522;Name=ACYKK2_000522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000522 DBLQKW010000007.1 Protein Homology CDS 32351 33910 . + 0 ID=cds-HIH2231202.1;Parent=gene-ACYKK2_000522;Dbxref=NCBI_GP:HIH2231202.1;Name=HIH2231202.1;Ontology_term=GO:0009306,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344851.1;locus_tag=ACYKK2_000522;product=GspE/PulE family protein;protein_id=HIH2231202.1;transl_table=11 DBLQKW010000007.1 tpg gene 33907 35088 . + . ID=gene-ACYKK2_000523;Name=ACYKK2_000523;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000523 DBLQKW010000007.1 Protein Homology CDS 33907 35088 . + 0 ID=cds-HIH2231203.1;Parent=gene-ACYKK2_000523;Dbxref=NCBI_GP:HIH2231203.1;Name=HIH2231203.1;Ontology_term=GO:0015628,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002880441.1;locus_tag=ACYKK2_000523;product=type II secretion system F family protein;protein_id=HIH2231203.1;transl_table=11 DBLQKW010000007.1 tpg gene 35081 35845 . - . ID=gene-ACYKK2_000524;Name=ACYKK2_000524;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000524 DBLQKW010000007.1 Protein Homology CDS 35081 35845 . - 0 ID=cds-HIH2231204.1;Parent=gene-ACYKK2_000524;Dbxref=NCBI_GP:HIH2231204.1;Name=HIH2231204.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344850.1;locus_tag=ACYKK2_000524;product=TSUP family transporter;protein_id=HIH2231204.1;transl_table=11 DBLQKW010000007.1 tpg gene 35849 36613 . - . ID=gene-ACYKK2_000525;Name=ACYKK2_000525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000525 DBLQKW010000007.1 Protein Homology CDS 35849 36613 . - 0 ID=cds-HIH2231205.1;Parent=gene-ACYKK2_000525;Dbxref=NCBI_GP:HIH2231205.1;Name=HIH2231205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344849.1;locus_tag=ACYKK2_000525;product=TIGR02757 family protein;protein_id=HIH2231205.1;transl_table=11 DBLQKW010000007.1 tpg gene 36630 38456 . - . ID=gene-ACYKK2_000526;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=ACYKK2_000526 DBLQKW010000007.1 Protein Homology CDS 36630 38456 . - 0 ID=cds-HIH2231206.1;Parent=gene-ACYKK2_000526;Dbxref=NCBI_GP:HIH2231206.1;Name=HIH2231206.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344848.1;locus_tag=ACYKK2_000526;product=flagellar hook-associated protein FlgK;protein_id=HIH2231206.1;transl_table=11 DBLQKW010000007.1 tpg gene 38466 38900 . - . ID=gene-ACYKK2_000527;Name=ACYKK2_000527;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000527 DBLQKW010000007.1 Protein Homology CDS 38466 38900 . - 0 ID=cds-HIH2231207.1;Parent=gene-ACYKK2_000527;Dbxref=NCBI_GP:HIH2231207.1;Name=HIH2231207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344847.1;locus_tag=ACYKK2_000527;product=flagellar protein FlgN;protein_id=HIH2231207.1;transl_table=11 DBLQKW010000007.1 tpg gene 38943 39140 . - . ID=gene-ACYKK2_000528;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=ACYKK2_000528 DBLQKW010000007.1 Protein Homology CDS 38943 39140 . - 0 ID=cds-HIH2231208.1;Parent=gene-ACYKK2_000528;Dbxref=NCBI_GP:HIH2231208.1;Name=HIH2231208.1;gbkey=CDS;gene=flgM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344846.1;locus_tag=ACYKK2_000528;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=HIH2231208.1;transl_table=11 DBLQKW010000007.1 tpg gene 39203 39544 . - . ID=gene-ACYKK2_000529;Name=ACYKK2_000529;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000529 DBLQKW010000007.1 Protein Homology CDS 39203 39544 . - 0 ID=cds-HIH2231209.1;Parent=gene-ACYKK2_000529;Dbxref=NCBI_GP:HIH2231209.1;Name=HIH2231209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344845.1;locus_tag=ACYKK2_000529;product=hypothetical protein;protein_id=HIH2231209.1;transl_table=11 DBLQKW010000007.1 tpg gene 39544 40590 . - . ID=gene-ACYKK2_000530;Name=ACYKK2_000530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000530 DBLQKW010000007.1 Protein Homology CDS 39544 40590 . - 0 ID=cds-HIH2231210.1;Parent=gene-ACYKK2_000530;Dbxref=NCBI_GP:HIH2231210.1;Name=HIH2231210.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344844.1;locus_tag=ACYKK2_000530;product=flagellar basal body P-ring protein FlgI;protein_id=HIH2231210.1;transl_table=11 DBLQKW010000007.1 tpg gene 40649 41332 . - . ID=gene-ACYKK2_000531;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=ACYKK2_000531 DBLQKW010000007.1 Protein Homology CDS 40649 41332 . - 0 ID=cds-HIH2231211.1;Parent=gene-ACYKK2_000531;Dbxref=NCBI_GP:HIH2231211.1;Name=HIH2231211.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344843.1;locus_tag=ACYKK2_000531;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=HIH2231211.1;transl_table=11 DBLQKW010000007.1 tpg gene 41325 41708 . - . ID=gene-ACYKK2_000532;Name=ACYKK2_000532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000532 DBLQKW010000007.1 Protein Homology CDS 41325 41708 . - 0 ID=cds-HIH2231212.1;Parent=gene-ACYKK2_000532;Dbxref=NCBI_GP:HIH2231212.1;Name=HIH2231212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344842.1;locus_tag=ACYKK2_000532;product=hypothetical protein;protein_id=HIH2231212.1;transl_table=11 DBLQKW010000007.1 tpg gene 41705 42778 . - . ID=gene-ACYKK2_000533;Name=ACYKK2_000533;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000533 DBLQKW010000007.1 Protein Homology CDS 41705 42778 . - 0 ID=cds-HIH2231213.1;Parent=gene-ACYKK2_000533;Dbxref=NCBI_GP:HIH2231213.1;Name=HIH2231213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344841.1;locus_tag=ACYKK2_000533;product=DUF5644 domain-containing protein;protein_id=HIH2231213.1;transl_table=11 DBLQKW010000007.1 tpg gene 42865 43686 . + . ID=gene-ACYKK2_000534;Name=ACYKK2_000534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000534 DBLQKW010000007.1 Protein Homology CDS 42865 43686 . + 0 ID=cds-HIH2231214.1;Parent=gene-ACYKK2_000534;Dbxref=NCBI_GP:HIH2231214.1;Name=HIH2231214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344840.1;locus_tag=ACYKK2_000534;product=thiamine-phosphate kinase;protein_id=HIH2231214.1;transl_table=11 DBLQKW010000007.1 tpg gene 43655 44773 . + . ID=gene-ACYKK2_000535;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=ACYKK2_000535 DBLQKW010000007.1 Protein Homology CDS 43655 44773 . + 0 ID=cds-HIH2231215.1;Parent=gene-ACYKK2_000535;Dbxref=NCBI_GP:HIH2231215.1;Name=HIH2231215.1;Ontology_term=GO:0001522,GO:0009451,GO:0009982;gbkey=CDS;gene=truD;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344839.1;locus_tag=ACYKK2_000535;product=tRNA pseudouridine(13) synthase TruD;protein_id=HIH2231215.1;transl_table=11 DBLQKW010000007.1 tpg pseudogene 44895 45209 . + . ID=gene-ACYKK2_000536;Name=ACYKK2_000536;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_000536;pseudo=true DBLQKW010000007.1 Protein Homology CDS 44895 45209 . + 0 ID=cds-ACYKK2_000536;Parent=gene-ACYKK2_000536;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344838.1;locus_tag=ACYKK2_000536;product=hypothetical protein;pseudo=true;transl_table=11 DBLQKW010000007.1 tpg gene 45367 46464 . - . ID=gene-ACYKK2_000537;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=ACYKK2_000537 DBLQKW010000007.1 Protein Homology CDS 45367 46464 . - 0 ID=cds-HIH2231216.1;Parent=gene-ACYKK2_000537;Dbxref=NCBI_GP:HIH2231216.1;Name=HIH2231216.1;Ontology_term=GO:0006415,GO:0016149,GO:0005737;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344837.1;locus_tag=ACYKK2_000537;product=peptide chain release factor 2;protein_id=HIH2231216.1;transl_table=11 DBLQKW010000007.1 tpg gene 46538 47857 . + . ID=gene-ACYKK2_000538;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=ACYKK2_000538 DBLQKW010000007.1 Protein Homology CDS 46538 47857 . + 0 ID=cds-HIH2231217.1;Parent=gene-ACYKK2_000538;Dbxref=NCBI_GP:HIH2231217.1;Name=HIH2231217.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344836.1;locus_tag=ACYKK2_000538;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=HIH2231217.1;transl_table=11 DBLQKW010000007.1 tpg gene 47847 48812 . + . ID=gene-ACYKK2_000539;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=ACYKK2_000539 DBLQKW010000007.1 Protein Homology CDS 47847 48812 . + 0 ID=cds-HIH2231218.1;Parent=gene-ACYKK2_000539;Dbxref=NCBI_GP:HIH2231218.1;Name=HIH2231218.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344835.1;locus_tag=ACYKK2_000539;product=tRNA lysidine(34) synthetase TilS;protein_id=HIH2231218.1;transl_table=11 DBLQKW010000007.1 tpg gene 48795 49508 . - . ID=gene-ACYKK2_000540;Name=ACYKK2_000540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000540 DBLQKW010000007.1 Protein Homology CDS 48795 49508 . - 0 ID=cds-HIH2231219.1;Parent=gene-ACYKK2_000540;Dbxref=NCBI_GP:HIH2231219.1;Name=HIH2231219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344834.1;locus_tag=ACYKK2_000540;product=EI24 domain-containing protein;protein_id=HIH2231219.1;transl_table=11 DBLQKW010000007.1 tpg gene 49510 50199 . - . ID=gene-ACYKK2_000541;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=ACYKK2_000541 DBLQKW010000007.1 Protein Homology CDS 49510 50199 . - 0 ID=cds-HIH2231220.1;Parent=gene-ACYKK2_000541;Dbxref=NCBI_GP:HIH2231220.1;Name=HIH2231220.1;gbkey=CDS;gene=dut;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344833.1;locus_tag=ACYKK2_000541;product=dUTPase;protein_id=HIH2231220.1;transl_table=11 DBLQKW010000007.1 tpg gene 50235 50798 . - . ID=gene-ACYKK2_000542;Name=ciaI;gbkey=Gene;gene=ciaI;gene_biotype=protein_coding;locus_tag=ACYKK2_000542 DBLQKW010000007.1 Protein Homology CDS 50235 50798 . - 0 ID=cds-HIH2231221.1;Parent=gene-ACYKK2_000542;Dbxref=NCBI_GP:HIH2231221.1;Name=HIH2231221.1;gbkey=CDS;gene=ciaI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344832.1;locus_tag=ACYKK2_000542;product=intracellular survival protein CiaI;protein_id=HIH2231221.1;transl_table=11 DBLQKW010000007.1 tpg gene 50873 51280 . + . ID=gene-ACYKK2_000543;Name=ACYKK2_000543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000543 DBLQKW010000007.1 Protein Homology CDS 50873 51280 . + 0 ID=cds-HIH2231222.1;Parent=gene-ACYKK2_000543;Dbxref=NCBI_GP:HIH2231222.1;Name=HIH2231222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344831.1;locus_tag=ACYKK2_000543;product=hypothetical protein;protein_id=HIH2231222.1;transl_table=11 DBLQKW010000007.1 tpg gene 51352 52134 . + . ID=gene-ACYKK2_000544;Name=kpsM;gbkey=Gene;gene=kpsM;gene_biotype=protein_coding;locus_tag=ACYKK2_000544 DBLQKW010000007.1 Protein Homology CDS 51352 52134 . + 0 ID=cds-HIH2231223.1;Parent=gene-ACYKK2_000544;Dbxref=NCBI_GP:HIH2231223.1;Name=HIH2231223.1;Ontology_term=GO:0015920,GO:0055085,GO:0140359;gbkey=CDS;gene=kpsM;go_function=ABC-type transporter activity|0140359||IEA;go_process=lipopolysaccharide transport|0015920||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344830.1;locus_tag=ACYKK2_000544;product=capsule polysaccharide transporter KpsM;protein_id=HIH2231223.1;transl_table=11 DBLQKW010000007.1 tpg gene 52131 52793 . + . ID=gene-ACYKK2_000545;Name=ACYKK2_000545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000545 DBLQKW010000007.1 Protein Homology CDS 52131 52793 . + 0 ID=cds-HIH2231224.1;Parent=gene-ACYKK2_000545;Dbxref=NCBI_GP:HIH2231224.1;Name=HIH2231224.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002781126.1;locus_tag=ACYKK2_000545;product=ABC transporter ATP-binding protein;protein_id=HIH2231224.1;transl_table=11 DBLQKW010000007.1 tpg gene 52793 53911 . + . ID=gene-ACYKK2_000546;Name=ACYKK2_000546;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000546 DBLQKW010000007.1 Protein Homology CDS 52793 53911 . + 0 ID=cds-HIH2231225.1;Parent=gene-ACYKK2_000546;Dbxref=NCBI_GP:HIH2231225.1;Name=HIH2231225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344828.1;locus_tag=ACYKK2_000546;product=capsule biosynthesis protein;protein_id=HIH2231225.1;transl_table=11 DBLQKW010000007.1 tpg gene 53913 55571 . + . ID=gene-ACYKK2_000547;Name=ACYKK2_000547;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000547 DBLQKW010000007.1 Protein Homology CDS 53913 55571 . + 0 ID=cds-HIH2231226.1;Parent=gene-ACYKK2_000547;Dbxref=NCBI_GP:HIH2231226.1;Name=HIH2231226.1;Ontology_term=GO:0015774,GO:0015159,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=polysaccharide transmembrane transporter activity|0015159||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344827.1;locus_tag=ACYKK2_000547;product=polysaccharide biosynthesis/export family protein;protein_id=HIH2231226.1;transl_table=11 DBLQKW010000007.1 tpg gene 55581 56528 . + . ID=gene-ACYKK2_000548;Name=ACYKK2_000548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000548 DBLQKW010000007.1 Protein Homology CDS 55581 56528 . + 0 ID=cds-HIH2231227.1;Parent=gene-ACYKK2_000548;Dbxref=NCBI_GP:HIH2231227.1;Name=HIH2231227.1;Ontology_term=GO:0005975,GO:0016853,GO:0046872,GO:0097367;gbkey=CDS;go_function=isomerase activity|0016853||IEA,metal ion binding|0046872||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344826.1;locus_tag=ACYKK2_000548;product=KpsF/GutQ family sugar-phosphate isomerase;protein_id=HIH2231227.1;transl_table=11 DBLQKW010000007.1 tpg gene 56528 58156 . + . ID=gene-ACYKK2_000549;Name=ACYKK2_000549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000549 DBLQKW010000007.1 Protein Homology CDS 56528 58156 . + 0 ID=cds-HIH2231228.1;Parent=gene-ACYKK2_000549;Dbxref=NCBI_GP:HIH2231228.1;Name=HIH2231228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019260274.1;locus_tag=ACYKK2_000549;product=galactosyltransferase-related protein;protein_id=HIH2231228.1;transl_table=11 DBLQKW010000007.1 tpg gene 58158 58837 . + . ID=gene-ACYKK2_000550;Name=ACYKK2_000550;end_range=58837,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000550;partial=true DBLQKW010000007.1 Protein Homology CDS 58158 58837 . + 0 ID=cds-HIH2231229.1;Parent=gene-ACYKK2_000550;Dbxref=NCBI_GP:HIH2231229.1;Name=HIH2231229.1;Ontology_term=GO:0006486,GO:0016757;end_range=58837,.;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894130.1;locus_tag=ACYKK2_000550;partial=true;product=glycosyltransferase family A protein;protein_id=HIH2231229.1;transl_table=11 ##sequence-region DBLQKW010000008.1 1 58084 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000008.1 tpg region 1 58084 . + . ID=DBLQKW010000008.1:1..58084;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000008.1 tpg gene 35 1153 . + . ID=gene-ACYKK2_000551;Name=ACYKK2_000551;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000551 DBLQKW010000008.1 Protein Homology CDS 35 1153 . + 0 ID=cds-HIH2231230.1;Parent=gene-ACYKK2_000551;Dbxref=NCBI_GP:HIH2231230.1;Name=HIH2231230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002870111.1;locus_tag=ACYKK2_000551;product=YcjF family protein;protein_id=HIH2231230.1;transl_table=11 DBLQKW010000008.1 tpg gene 1164 1334 . + . ID=gene-ACYKK2_000552;Name=ACYKK2_000552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000552 DBLQKW010000008.1 GeneMarkS-2+ CDS 1164 1334 . + 0 ID=cds-HIH2231231.1;Parent=gene-ACYKK2_000552;Dbxref=NCBI_GP:HIH2231231.1;Name=HIH2231231.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_000552;product=hypothetical protein;protein_id=HIH2231231.1;transl_table=11 DBLQKW010000008.1 tpg gene 1348 1653 . + . ID=gene-ACYKK2_000553;Name=ACYKK2_000553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000553 DBLQKW010000008.1 Protein Homology CDS 1348 1653 . + 0 ID=cds-HIH2231232.1;Parent=gene-ACYKK2_000553;Dbxref=NCBI_GP:HIH2231232.1;Name=HIH2231232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002866447.1;locus_tag=ACYKK2_000553;product=hypothetical protein;protein_id=HIH2231232.1;transl_table=11 DBLQKW010000008.1 tpg gene 1662 2729 . + . ID=gene-ACYKK2_000554;Name=ACYKK2_000554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000554 DBLQKW010000008.1 Protein Homology CDS 1662 2729 . + 0 ID=cds-HIH2231233.1;Parent=gene-ACYKK2_000554;Dbxref=NCBI_GP:HIH2231233.1;Name=HIH2231233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344000.1;locus_tag=ACYKK2_000554;product=HP0729 family protein;protein_id=HIH2231233.1;transl_table=11 DBLQKW010000008.1 tpg gene 2726 3598 . + . ID=gene-ACYKK2_000555;Name=ACYKK2_000555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000555 DBLQKW010000008.1 Protein Homology CDS 2726 3598 . + 0 ID=cds-HIH2231234.1;Parent=gene-ACYKK2_000555;Dbxref=NCBI_GP:HIH2231234.1;Name=HIH2231234.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344001.1;locus_tag=ACYKK2_000555;product=helix-turn-helix transcriptional regulator;protein_id=HIH2231234.1;transl_table=11 DBLQKW010000008.1 tpg gene 3620 3695 . - . ID=gene-ACYKK2_000556;Name=ACYKK2_000556;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_000556 DBLQKW010000008.1 tRNAscan-SE tRNA 3620 3695 . - . ID=rna-ACYKK2_000556;Parent=gene-ACYKK2_000556;anticodon=(pos:complement(3660..3662));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_000556;product=tRNA-Met DBLQKW010000008.1 tRNAscan-SE exon 3620 3695 . - . ID=exon-ACYKK2_000556-1;Parent=rna-ACYKK2_000556;anticodon=(pos:complement(3660..3662));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_000556;product=tRNA-Met DBLQKW010000008.1 tpg gene 3729 3803 . - . ID=gene-ACYKK2_000557;Name=ACYKK2_000557;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_000557 DBLQKW010000008.1 tRNAscan-SE tRNA 3729 3803 . - . ID=rna-ACYKK2_000557;Parent=gene-ACYKK2_000557;anticodon=(pos:complement(3769..3771));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_000557;product=tRNA-Gln DBLQKW010000008.1 tRNAscan-SE exon 3729 3803 . - . ID=exon-ACYKK2_000557-1;Parent=rna-ACYKK2_000557;anticodon=(pos:complement(3769..3771));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_000557;product=tRNA-Gln DBLQKW010000008.1 tpg gene 3896 4915 . + . ID=gene-ACYKK2_000558;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=ACYKK2_000558 DBLQKW010000008.1 Protein Homology CDS 3896 4915 . + 0 ID=cds-HIH2231235.1;Parent=gene-ACYKK2_000558;Dbxref=NCBI_GP:HIH2231235.1;Name=HIH2231235.1;gbkey=CDS;gene=ribA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344002.1;locus_tag=ACYKK2_000558;product=bifunctional 3%2C4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II;protein_id=HIH2231235.1;transl_table=11 DBLQKW010000008.1 tpg gene 4927 5370 . + . ID=gene-ACYKK2_000559;Name=ACYKK2_000559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000559 DBLQKW010000008.1 Protein Homology CDS 4927 5370 . + 0 ID=cds-HIH2231236.1;Parent=gene-ACYKK2_000559;Dbxref=NCBI_GP:HIH2231236.1;Name=HIH2231236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344003.1;locus_tag=ACYKK2_000559;product=GatB/YqeY domain-containing protein;protein_id=HIH2231236.1;transl_table=11 DBLQKW010000008.1 tpg gene 5388 7088 . + . ID=gene-ACYKK2_000560;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=ACYKK2_000560 DBLQKW010000008.1 Protein Homology CDS 5388 7088 . + 0 ID=cds-HIH2231237.1;Parent=gene-ACYKK2_000560;Dbxref=NCBI_GP:HIH2231237.1;Name=HIH2231237.1;gbkey=CDS;gene=ilvI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344004.1;locus_tag=ACYKK2_000560;product=acetolactate synthase large subunit;protein_id=HIH2231237.1;transl_table=11 DBLQKW010000008.1 tpg gene 7085 7549 . + . ID=gene-ACYKK2_000561;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=ACYKK2_000561 DBLQKW010000008.1 Protein Homology CDS 7085 7549 . + 0 ID=cds-HIH2231238.1;Parent=gene-ACYKK2_000561;Dbxref=NCBI_GP:HIH2231238.1;Name=HIH2231238.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344005.1;locus_tag=ACYKK2_000561;product=acetolactate synthase small subunit;protein_id=HIH2231238.1;transl_table=11 DBLQKW010000008.1 tpg gene 7546 8511 . + . ID=gene-ACYKK2_000562;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=ACYKK2_000562 DBLQKW010000008.1 Protein Homology CDS 7546 8511 . + 0 ID=cds-HIH2231239.1;Parent=gene-ACYKK2_000562;Dbxref=NCBI_GP:HIH2231239.1;Name=HIH2231239.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344006.1;locus_tag=ACYKK2_000562;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=HIH2231239.1;transl_table=11 DBLQKW010000008.1 tpg gene 8500 9528 . - . ID=gene-ACYKK2_000563;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=ACYKK2_000563 DBLQKW010000008.1 Protein Homology CDS 8500 9528 . - 0 ID=cds-HIH2231240.1;Parent=gene-ACYKK2_000563;Dbxref=NCBI_GP:HIH2231240.1;Name=HIH2231240.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344007.1;locus_tag=ACYKK2_000563;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=HIH2231240.1;transl_table=11 DBLQKW010000008.1 tpg gene 9521 10258 . - . ID=gene-ACYKK2_000564;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=ACYKK2_000564 DBLQKW010000008.1 Protein Homology CDS 9521 10258 . - 0 ID=cds-HIH2231241.1;Parent=gene-ACYKK2_000564;Dbxref=NCBI_GP:HIH2231241.1;Name=HIH2231241.1;Ontology_term=GO:0015628,GO:0005886;gbkey=CDS;gene=tatC;go_component=plasma membrane|0005886||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344008.1;locus_tag=ACYKK2_000564;product=twin-arginine translocase subunit TatC;protein_id=HIH2231241.1;transl_table=11 DBLQKW010000008.1 tpg pseudogene 10251 10666 . - . ID=gene-ACYKK2_000565;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=pseudogene;locus_tag=ACYKK2_000565;pseudo=true DBLQKW010000008.1 Protein Homology CDS 10251 10666 . - 0 ID=cds-ACYKK2_000565;Parent=gene-ACYKK2_000565;Note=frameshifted;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344009.1;locus_tag=ACYKK2_000565;product=Sec-independent protein translocase protein TatB;pseudo=true;transl_table=11 DBLQKW010000008.1 tpg gene 10725 11792 . - . ID=gene-ACYKK2_000566;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=ACYKK2_000566 DBLQKW010000008.1 Protein Homology CDS 10725 11792 . - 0 ID=cds-HIH2231242.1;Parent=gene-ACYKK2_000566;Dbxref=NCBI_GP:HIH2231242.1;Name=HIH2231242.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344010.1;locus_tag=ACYKK2_000566;product=radical SAM family heme chaperone HemW;protein_id=HIH2231242.1;transl_table=11 DBLQKW010000008.1 tpg gene 11893 12363 . + . ID=gene-ACYKK2_000567;Name=nudH;gbkey=Gene;gene=nudH;gene_biotype=protein_coding;locus_tag=ACYKK2_000567 DBLQKW010000008.1 Protein Homology CDS 11893 12363 . + 0 ID=cds-HIH2231243.1;Parent=gene-ACYKK2_000567;Dbxref=NCBI_GP:HIH2231243.1;Name=HIH2231243.1;gbkey=CDS;gene=nudH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344011.1;locus_tag=ACYKK2_000567;product=RNA pyrophosphohydrolase;protein_id=HIH2231243.1;transl_table=11 DBLQKW010000008.1 tpg gene 12365 13567 . + . ID=gene-ACYKK2_000568;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=ACYKK2_000568 DBLQKW010000008.1 Protein Homology CDS 12365 13567 . + 0 ID=cds-HIH2231244.1;Parent=gene-ACYKK2_000568;Dbxref=NCBI_GP:HIH2231244.1;Name=HIH2231244.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344012.1;locus_tag=ACYKK2_000568;product=aspartate kinase;protein_id=HIH2231244.1;transl_table=11 DBLQKW010000008.1 tpg gene 13568 14104 . + . ID=gene-ACYKK2_000569;Name=ACYKK2_000569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000569 DBLQKW010000008.1 Protein Homology CDS 13568 14104 . + 0 ID=cds-HIH2231245.1;Parent=gene-ACYKK2_000569;Dbxref=NCBI_GP:HIH2231245.1;Name=HIH2231245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344013.1;locus_tag=ACYKK2_000569;product=HobA family DNA replication regulator;protein_id=HIH2231245.1;transl_table=11 DBLQKW010000008.1 tpg gene 14110 14709 . + . ID=gene-ACYKK2_000570;Name=ACYKK2_000570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000570 DBLQKW010000008.1 Protein Homology CDS 14110 14709 . + 0 ID=cds-HIH2231246.1;Parent=gene-ACYKK2_000570;Dbxref=NCBI_GP:HIH2231246.1;Name=HIH2231246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344014.1;locus_tag=ACYKK2_000570;product=DNA polymerase III subunit delta';protein_id=HIH2231246.1;transl_table=11 DBLQKW010000008.1 tpg gene 14711 15853 . + . ID=gene-ACYKK2_000571;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=ACYKK2_000571 DBLQKW010000008.1 Protein Homology CDS 14711 15853 . + 0 ID=cds-HIH2231247.1;Parent=gene-ACYKK2_000571;Dbxref=NCBI_GP:HIH2231247.1;Name=HIH2231247.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344015.1;locus_tag=ACYKK2_000571;product=dihydropteroate synthase;protein_id=HIH2231247.1;transl_table=11 DBLQKW010000008.1 tpg gene 15854 17797 . + . ID=gene-ACYKK2_000572;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=ACYKK2_000572 DBLQKW010000008.1 Protein Homology CDS 15854 17797 . + 0 ID=cds-HIH2231248.1;Parent=gene-ACYKK2_000572;Dbxref=NCBI_GP:HIH2231248.1;Name=HIH2231248.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344016.1;locus_tag=ACYKK2_000572;product=NAD-dependent DNA ligase LigA;protein_id=HIH2231248.1;transl_table=11 DBLQKW010000008.1 tpg gene 17778 18782 . + . ID=gene-ACYKK2_000573;Name=ACYKK2_000573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000573 DBLQKW010000008.1 Protein Homology CDS 17778 18782 . + 0 ID=cds-HIH2231249.1;Parent=gene-ACYKK2_000573;Dbxref=NCBI_GP:HIH2231249.1;Name=HIH2231249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344017.1;locus_tag=ACYKK2_000573;product=hypothetical protein;protein_id=HIH2231249.1;transl_table=11 DBLQKW010000008.1 tpg gene 18779 19540 . + . ID=gene-ACYKK2_000574;Name=tlyA;gbkey=Gene;gene=tlyA;gene_biotype=protein_coding;locus_tag=ACYKK2_000574 DBLQKW010000008.1 Protein Homology CDS 18779 19540 . + 0 ID=cds-HIH2231250.1;Parent=gene-ACYKK2_000574;Dbxref=NCBI_GP:HIH2231250.1;Name=HIH2231250.1;Ontology_term=GO:0000451,GO:0003723,GO:0008649;gbkey=CDS;gene=tlyA;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344018.1;locus_tag=ACYKK2_000574;product=23S rRNA (cytidine-2'-O)-methyltransferase TlyA;protein_id=HIH2231250.1;transl_table=11 DBLQKW010000008.1 tpg gene 19506 20360 . + . ID=gene-ACYKK2_000575;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=ACYKK2_000575 DBLQKW010000008.1 Protein Homology CDS 19506 20360 . + 0 ID=cds-HIH2231251.1;Parent=gene-ACYKK2_000575;Dbxref=NCBI_GP:HIH2231251.1;Name=HIH2231251.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344019.1;locus_tag=ACYKK2_000575;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=HIH2231251.1;transl_table=11 DBLQKW010000008.1 tpg gene 20347 21057 . + . ID=gene-ACYKK2_000576;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=ACYKK2_000576 DBLQKW010000008.1 Protein Homology CDS 20347 21057 . + 0 ID=cds-HIH2231252.1;Parent=gene-ACYKK2_000576;Dbxref=NCBI_GP:HIH2231252.1;Name=HIH2231252.1;Ontology_term=GO:0002098;gbkey=CDS;gene=cmoA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344020.1;locus_tag=ACYKK2_000576;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=HIH2231252.1;transl_table=11 DBLQKW010000008.1 tpg gene 21047 21268 . - . ID=gene-ACYKK2_000577;Name=ACYKK2_000577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000577 DBLQKW010000008.1 Protein Homology CDS 21047 21268 . - 0 ID=cds-HIH2231253.1;Parent=gene-ACYKK2_000577;Dbxref=NCBI_GP:HIH2231253.1;Name=HIH2231253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344021.1;locus_tag=ACYKK2_000577;product=EexN family lipoprotein;protein_id=HIH2231253.1;transl_table=11 DBLQKW010000008.1 tpg gene 21265 21699 . - . ID=gene-ACYKK2_000578;Name=ACYKK2_000578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000578 DBLQKW010000008.1 Protein Homology CDS 21265 21699 . - 0 ID=cds-HIH2231254.1;Parent=gene-ACYKK2_000578;Dbxref=NCBI_GP:HIH2231254.1;Name=HIH2231254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344022.1;locus_tag=ACYKK2_000578;product=EexN family lipoprotein;protein_id=HIH2231254.1;transl_table=11 DBLQKW010000008.1 tpg gene 21757 22389 . - . ID=gene-ACYKK2_000579;Name=ACYKK2_000579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000579 DBLQKW010000008.1 Protein Homology CDS 21757 22389 . - 0 ID=cds-HIH2231255.1;Parent=gene-ACYKK2_000579;Dbxref=NCBI_GP:HIH2231255.1;Name=HIH2231255.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344023.1;locus_tag=ACYKK2_000579;product=trimeric intracellular cation channel family protein;protein_id=HIH2231255.1;transl_table=11 DBLQKW010000008.1 tpg gene 22400 23050 . - . ID=gene-ACYKK2_000580;Name=ACYKK2_000580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000580 DBLQKW010000008.1 Protein Homology CDS 22400 23050 . - 0 ID=cds-HIH2231256.1;Parent=gene-ACYKK2_000580;Dbxref=NCBI_GP:HIH2231256.1;Name=HIH2231256.1;Ontology_term=GO:0003676,GO:0016787,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344024.1;locus_tag=ACYKK2_000580;product=DNA/RNA non-specific endonuclease;protein_id=HIH2231256.1;transl_table=11 DBLQKW010000008.1 tpg gene 23047 23673 . - . ID=gene-ACYKK2_000581;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=ACYKK2_000581 DBLQKW010000008.1 Protein Homology CDS 23047 23673 . - 0 ID=cds-HIH2231257.1;Parent=gene-ACYKK2_000581;Dbxref=NCBI_GP:HIH2231257.1;Name=HIH2231257.1;Ontology_term=GO:0006281,GO:0140078;gbkey=CDS;gene=nth;go_function=class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344025.1;locus_tag=ACYKK2_000581;product=endonuclease III;protein_id=HIH2231257.1;transl_table=11 DBLQKW010000008.1 tpg gene 23754 24575 . + . ID=gene-ACYKK2_000582;Name=peb4;gbkey=Gene;gene=peb4;gene_biotype=protein_coding;locus_tag=ACYKK2_000582 DBLQKW010000008.1 Protein Homology CDS 23754 24575 . + 0 ID=cds-HIH2231258.1;Parent=gene-ACYKK2_000582;Dbxref=NCBI_GP:HIH2231258.1;Name=HIH2231258.1;gbkey=CDS;gene=peb4;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344026.1;locus_tag=ACYKK2_000582;product=peptidylprolyl isomerase PEB4;protein_id=HIH2231258.1;transl_table=11 DBLQKW010000008.1 tpg gene 24575 25639 . + . ID=gene-ACYKK2_000583;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=ACYKK2_000583 DBLQKW010000008.1 Protein Homology CDS 24575 25639 . + 0 ID=cds-HIH2231259.1;Parent=gene-ACYKK2_000583;Dbxref=NCBI_GP:HIH2231259.1;Name=HIH2231259.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344027.1;locus_tag=ACYKK2_000583;product=class II fructose-bisphosphate aldolase;protein_id=HIH2231259.1;transl_table=11 DBLQKW010000008.1 tpg gene 25734 27176 . + . ID=gene-ACYKK2_000584;Name=ACYKK2_000584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000584 DBLQKW010000008.1 Protein Homology CDS 25734 27176 . + 0 ID=cds-HIH2231260.1;Parent=gene-ACYKK2_000584;Dbxref=NCBI_GP:HIH2231260.1;Name=HIH2231260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344028.1;locus_tag=ACYKK2_000584;product=MotA/TolQ/ExbB proton channel family protein;protein_id=HIH2231260.1;transl_table=11 DBLQKW010000008.1 tpg gene 27173 28126 . + . ID=gene-ACYKK2_000585;Name=ACYKK2_000585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000585 DBLQKW010000008.1 Protein Homology CDS 27173 28126 . + 0 ID=cds-HIH2231261.1;Parent=gene-ACYKK2_000585;Dbxref=NCBI_GP:HIH2231261.1;Name=HIH2231261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344029.1;locus_tag=ACYKK2_000585;product=OmpA family protein;protein_id=HIH2231261.1;transl_table=11 DBLQKW010000008.1 tpg gene 28113 28988 . + . ID=gene-ACYKK2_000586;Name=ACYKK2_000586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000586 DBLQKW010000008.1 Protein Homology CDS 28113 28988 . + 0 ID=cds-HIH2231262.1;Parent=gene-ACYKK2_000586;Dbxref=NCBI_GP:HIH2231262.1;Name=HIH2231262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344030.1;locus_tag=ACYKK2_000586;product=1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase;protein_id=HIH2231262.1;transl_table=11 DBLQKW010000008.1 tpg gene 28980 30323 . - . ID=gene-ACYKK2_000587;Name=ACYKK2_000587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000587 DBLQKW010000008.1 Protein Homology CDS 28980 30323 . - 0 ID=cds-HIH2231263.1;Parent=gene-ACYKK2_000587;Dbxref=NCBI_GP:HIH2231263.1;Name=HIH2231263.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344031.1;locus_tag=ACYKK2_000587;product=sodium-dependent transporter;protein_id=HIH2231263.1;transl_table=11 DBLQKW010000008.1 tpg gene 30374 31042 . - . ID=gene-ACYKK2_000588;Name=ACYKK2_000588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000588 DBLQKW010000008.1 Protein Homology CDS 30374 31042 . - 0 ID=cds-HIH2231264.1;Parent=gene-ACYKK2_000588;Dbxref=NCBI_GP:HIH2231264.1;Name=HIH2231264.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344032.1;locus_tag=ACYKK2_000588;product=MOSC domain-containing protein;protein_id=HIH2231264.1;transl_table=11 DBLQKW010000008.1 tpg gene 31039 32742 . - . ID=gene-ACYKK2_000589;Name=dsbD;gbkey=Gene;gene=dsbD;gene_biotype=protein_coding;locus_tag=ACYKK2_000589 DBLQKW010000008.1 Protein Homology CDS 31039 32742 . - 0 ID=cds-HIH2231265.1;Parent=gene-ACYKK2_000589;Dbxref=NCBI_GP:HIH2231265.1;Name=HIH2231265.1;Ontology_term=GO:0047134;gbkey=CDS;gene=dsbD;go_function=protein-disulfide reductase [NAD(P)H] activity|0047134||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344033.1;locus_tag=ACYKK2_000589;product=protein-disulfide reductase DsbD;protein_id=HIH2231265.1;transl_table=11 DBLQKW010000008.1 tpg gene 32837 33718 . + . ID=gene-ACYKK2_000590;Name=ppk2;gbkey=Gene;gene=ppk2;gene_biotype=protein_coding;locus_tag=ACYKK2_000590 DBLQKW010000008.1 Protein Homology CDS 32837 33718 . + 0 ID=cds-HIH2231266.1;Parent=gene-ACYKK2_000590;Dbxref=NCBI_GP:HIH2231266.1;Name=HIH2231266.1;Ontology_term=GO:0006793,GO:0008976;gbkey=CDS;gene=ppk2;go_function=polyphosphate kinase activity|0008976||IEA;go_process=phosphorus metabolic process|0006793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344034.1;locus_tag=ACYKK2_000590;product=polyphosphate kinase 2;protein_id=HIH2231266.1;transl_table=11 DBLQKW010000008.1 tpg gene 33727 34917 . + . ID=gene-ACYKK2_000591;Name=ACYKK2_000591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000591 DBLQKW010000008.1 Protein Homology CDS 33727 34917 . + 0 ID=cds-HIH2231267.1;Parent=gene-ACYKK2_000591;Dbxref=NCBI_GP:HIH2231267.1;Name=HIH2231267.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344035.1;locus_tag=ACYKK2_000591;product=M20 metallopeptidase family protein;protein_id=HIH2231267.1;transl_table=11 DBLQKW010000008.1 tpg gene 34996 36168 . + . ID=gene-ACYKK2_000592;Name=ACYKK2_000592;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000592 DBLQKW010000008.1 Protein Homology CDS 34996 36168 . + 0 ID=cds-HIH2231268.1;Parent=gene-ACYKK2_000592;Dbxref=NCBI_GP:HIH2231268.1;Name=HIH2231268.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344036.1;locus_tag=ACYKK2_000592;product=efflux RND transporter periplasmic adaptor subunit;protein_id=HIH2231268.1;transl_table=11 DBLQKW010000008.1 tpg gene 36168 38093 . + . ID=gene-ACYKK2_000593;Name=ACYKK2_000593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000593 DBLQKW010000008.1 Protein Homology CDS 36168 38093 . + 0 ID=cds-HIH2231269.1;Parent=gene-ACYKK2_000593;Dbxref=NCBI_GP:HIH2231269.1;Name=HIH2231269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344037.1;locus_tag=ACYKK2_000593;product=ABC transporter permease;protein_id=HIH2231269.1;transl_table=11 DBLQKW010000008.1 tpg gene 38095 39465 . + . ID=gene-ACYKK2_000594;Name=ACYKK2_000594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000594 DBLQKW010000008.1 Protein Homology CDS 38095 39465 . + 0 ID=cds-HIH2231270.1;Parent=gene-ACYKK2_000594;Dbxref=NCBI_GP:HIH2231270.1;Name=HIH2231270.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344038.1;locus_tag=ACYKK2_000594;product=TolC family protein;protein_id=HIH2231270.1;transl_table=11 DBLQKW010000008.1 tpg gene 39468 40646 . - . ID=gene-ACYKK2_000595;Name=ACYKK2_000595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000595 DBLQKW010000008.1 Protein Homology CDS 39468 40646 . - 0 ID=cds-HIH2231271.1;Parent=gene-ACYKK2_000595;Dbxref=NCBI_GP:HIH2231271.1;Name=HIH2231271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344039.1;locus_tag=ACYKK2_000595;product=SGNH/GDSL hydrolase family protein;protein_id=HIH2231271.1;transl_table=11 DBLQKW010000008.1 tpg gene 40633 41643 . - . ID=gene-ACYKK2_000596;Name=ACYKK2_000596;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000596 DBLQKW010000008.1 Protein Homology CDS 40633 41643 . - 0 ID=cds-HIH2231272.1;Parent=gene-ACYKK2_000596;Dbxref=NCBI_GP:HIH2231272.1;Name=HIH2231272.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344040.1;locus_tag=ACYKK2_000596;product=SGNH/GDSL hydrolase family protein;protein_id=HIH2231272.1;transl_table=11 DBLQKW010000008.1 tpg gene 41644 43020 . - . ID=gene-ACYKK2_000597;Name=ACYKK2_000597;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000597 DBLQKW010000008.1 Protein Homology CDS 41644 43020 . - 0 ID=cds-HIH2231273.1;Parent=gene-ACYKK2_000597;Dbxref=NCBI_GP:HIH2231273.1;Name=HIH2231273.1;Ontology_term=GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344041.1;locus_tag=ACYKK2_000597;product=MBOAT family O-acyltransferase;protein_id=HIH2231273.1;transl_table=11 DBLQKW010000008.1 tpg gene 43063 43566 . - . ID=gene-ACYKK2_000598;Name=ctf;gbkey=Gene;gene=ctf;gene_biotype=protein_coding;locus_tag=ACYKK2_000598 DBLQKW010000008.1 Protein Homology CDS 43063 43566 . - 0 ID=cds-HIH2231274.1;Parent=gene-ACYKK2_000598;Dbxref=NCBI_GP:HIH2231274.1;Name=HIH2231274.1;gbkey=CDS;gene=ctf;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344042.1;locus_tag=ACYKK2_000598;product=non-heme ferritin;protein_id=HIH2231274.1;transl_table=11 DBLQKW010000008.1 tpg gene 43746 44741 . + . ID=gene-ACYKK2_000599;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=ACYKK2_000599 DBLQKW010000008.1 Protein Homology CDS 43746 44741 . + 0 ID=cds-HIH2231275.1;Parent=gene-ACYKK2_000599;Dbxref=NCBI_GP:HIH2231275.1;Name=HIH2231275.1;gbkey=CDS;gene=pstS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344043.1;locus_tag=ACYKK2_000599;product=substrate-binding domain-containing protein;protein_id=HIH2231275.1;transl_table=11 DBLQKW010000008.1 tpg gene 44751 45665 . + . ID=gene-ACYKK2_000600;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=ACYKK2_000600 DBLQKW010000008.1 Protein Homology CDS 44751 45665 . + 0 ID=cds-HIH2231276.1;Parent=gene-ACYKK2_000600;Dbxref=NCBI_GP:HIH2231276.1;Name=HIH2231276.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344044.1;locus_tag=ACYKK2_000600;product=phosphate ABC transporter permease subunit PstC;protein_id=HIH2231276.1;transl_table=11 DBLQKW010000008.1 tpg gene 45662 46750 . + . ID=gene-ACYKK2_000601;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=ACYKK2_000601 DBLQKW010000008.1 Protein Homology CDS 45662 46750 . + 0 ID=cds-HIH2231277.1;Parent=gene-ACYKK2_000601;Dbxref=NCBI_GP:HIH2231277.1;Name=HIH2231277.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014472969.1;locus_tag=ACYKK2_000601;product=phosphate ABC transporter permease PstA;protein_id=HIH2231277.1;transl_table=11 DBLQKW010000008.1 tpg gene 46747 47487 . + . ID=gene-ACYKK2_000602;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=ACYKK2_000602 DBLQKW010000008.1 Protein Homology CDS 46747 47487 . + 0 ID=cds-HIH2231278.1;Parent=gene-ACYKK2_000602;Dbxref=NCBI_GP:HIH2231278.1;Name=HIH2231278.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344046.1;locus_tag=ACYKK2_000602;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=HIH2231278.1;transl_table=11 DBLQKW010000008.1 tpg gene 47550 48161 . + . ID=gene-ACYKK2_000603;Name=ACYKK2_000603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000603 DBLQKW010000008.1 Protein Homology CDS 47550 48161 . + 0 ID=cds-HIH2231279.1;Parent=gene-ACYKK2_000603;Dbxref=NCBI_GP:HIH2231279.1;Name=HIH2231279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010891868.1;locus_tag=ACYKK2_000603;product=DUF2920 family protein;protein_id=HIH2231279.1;transl_table=11 DBLQKW010000008.1 tpg gene 48131 48778 . + . ID=gene-ACYKK2_000604;Name=ACYKK2_000604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000604 DBLQKW010000008.1 Protein Homology CDS 48131 48778 . + 0 ID=cds-HIH2231280.1;Parent=gene-ACYKK2_000604;Dbxref=NCBI_GP:HIH2231280.1;Name=HIH2231280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010790926.1;locus_tag=ACYKK2_000604;product=DUF2920 family protein;protein_id=HIH2231280.1;transl_table=11 DBLQKW010000008.1 tpg gene 48867 50183 . + . ID=gene-ACYKK2_000605;Name=ACYKK2_000605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000605 DBLQKW010000008.1 Protein Homology CDS 48867 50183 . + 0 ID=cds-HIH2231281.1;Parent=gene-ACYKK2_000605;Dbxref=NCBI_GP:HIH2231281.1;Name=HIH2231281.1;Ontology_term=GO:0006855,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344049.1;locus_tag=ACYKK2_000605;product=MATE family efflux transporter;protein_id=HIH2231281.1;transl_table=11 DBLQKW010000008.1 tpg gene 50159 50806 . + . ID=gene-ACYKK2_000606;Name=ACYKK2_000606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000606 DBLQKW010000008.1 Protein Homology CDS 50159 50806 . + 0 ID=cds-HIH2231282.1;Parent=gene-ACYKK2_000606;Dbxref=NCBI_GP:HIH2231282.1;Name=HIH2231282.1;Ontology_term=GO:0006508,GO:0008233,GO:0008237,GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=peptidase activity|0008233||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344050.1;locus_tag=ACYKK2_000606;product=M48 family metallopeptidase;protein_id=HIH2231282.1;transl_table=11 DBLQKW010000008.1 tpg gene 50848 52368 . + . ID=gene-ACYKK2_000607;Name=ACYKK2_000607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000607 DBLQKW010000008.1 Protein Homology CDS 50848 52368 . + 0 ID=cds-HIH2231283.1;Parent=gene-ACYKK2_000607;Dbxref=NCBI_GP:HIH2231283.1;Name=HIH2231283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344051.1;locus_tag=ACYKK2_000607;product=hypothetical protein;protein_id=HIH2231283.1;transl_table=11 DBLQKW010000008.1 tpg gene 52349 54535 . + . ID=gene-ACYKK2_000608;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=ACYKK2_000608 DBLQKW010000008.1 Protein Homology CDS 52349 54535 . + 0 ID=cds-HIH2231284.1;Parent=gene-ACYKK2_000608;Dbxref=NCBI_GP:HIH2231284.1;Name=HIH2231284.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002785894.1;locus_tag=ACYKK2_000608;product=carbamoyltransferase HypF;protein_id=HIH2231284.1;transl_table=11 DBLQKW010000008.1 tpg gene 54612 55349 . + . ID=gene-ACYKK2_000609;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=ACYKK2_000609 DBLQKW010000008.1 Protein Homology CDS 54612 55349 . + 0 ID=cds-HIH2231285.1;Parent=gene-ACYKK2_000609;Dbxref=NCBI_GP:HIH2231285.1;Name=HIH2231285.1;Ontology_term=GO:0036211,GO:0051604,GO:0000166,GO:0003924,GO:0016151,GO:0016530;gbkey=CDS;gene=hypB;go_function=nucleotide binding|0000166||IEA,GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA,metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344053.1;locus_tag=ACYKK2_000609;product=hydrogenase nickel incorporation protein HypB;protein_id=HIH2231285.1;transl_table=11 DBLQKW010000008.1 tpg gene 55349 55630 . + . ID=gene-ACYKK2_000610;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=ACYKK2_000610 DBLQKW010000008.1 Protein Homology CDS 55349 55630 . + 0 ID=cds-HIH2231286.1;Parent=gene-ACYKK2_000610;Dbxref=NCBI_GP:HIH2231286.1;Name=HIH2231286.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344054.1;locus_tag=ACYKK2_000610;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=HIH2231286.1;transl_table=11 DBLQKW010000008.1 tpg gene 55614 56705 . + . ID=gene-ACYKK2_000611;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=ACYKK2_000611 DBLQKW010000008.1 Protein Homology CDS 55614 56705 . + 0 ID=cds-HIH2231287.1;Parent=gene-ACYKK2_000611;Dbxref=NCBI_GP:HIH2231287.1;Name=HIH2231287.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344055.1;locus_tag=ACYKK2_000611;product=hydrogenase formation protein HypD;protein_id=HIH2231287.1;transl_table=11 DBLQKW010000008.1 tpg gene 56702 57676 . + . ID=gene-ACYKK2_000612;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=ACYKK2_000612 DBLQKW010000008.1 Protein Homology CDS 56702 57676 . + 0 ID=cds-HIH2231288.1;Parent=gene-ACYKK2_000612;Dbxref=NCBI_GP:HIH2231288.1;Name=HIH2231288.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344056.1;locus_tag=ACYKK2_000612;product=hydrogenase expression/formation protein HypE;protein_id=HIH2231288.1;transl_table=11 DBLQKW010000008.1 tpg gene 57676 58020 . + . ID=gene-ACYKK2_000613;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=ACYKK2_000613 DBLQKW010000008.1 Protein Homology CDS 57676 58020 . + 0 ID=cds-HIH2231289.1;Parent=gene-ACYKK2_000613;Dbxref=NCBI_GP:HIH2231289.1;Name=HIH2231289.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344057.1;locus_tag=ACYKK2_000613;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=HIH2231289.1;transl_table=11 ##sequence-region DBLQKW010000009.1 1 51806 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000009.1 tpg region 1 51806 . + . ID=DBLQKW010000009.1:1..51806;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000009.1 tpg gene 23 874 . + . ID=gene-ACYKK2_000614;Name=ACYKK2_000614;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000614 DBLQKW010000009.1 Protein Homology CDS 23 874 . + 0 ID=cds-HIH2231290.1;Parent=gene-ACYKK2_000614;Dbxref=NCBI_GP:HIH2231290.1;Name=HIH2231290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343635.1;locus_tag=ACYKK2_000614;product=ChaN family lipoprotein;protein_id=HIH2231290.1;transl_table=11 DBLQKW010000009.1 tpg gene 871 3138 . + . ID=gene-ACYKK2_000615;Name=ACYKK2_000615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000615 DBLQKW010000009.1 Protein Homology CDS 871 3138 . + 0 ID=cds-HIH2231291.1;Parent=gene-ACYKK2_000615;Dbxref=NCBI_GP:HIH2231291.1;Name=HIH2231291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343636.1;locus_tag=ACYKK2_000615;product=TonB-dependent receptor domain-containing protein;protein_id=HIH2231291.1;transl_table=11 DBLQKW010000009.1 tpg gene 3151 3912 . + . ID=gene-ACYKK2_000616;Name=ACYKK2_000616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000616 DBLQKW010000009.1 Protein Homology CDS 3151 3912 . + 0 ID=cds-HIH2231292.1;Parent=gene-ACYKK2_000616;Dbxref=NCBI_GP:HIH2231292.1;Name=HIH2231292.1;Ontology_term=GO:0015031,GO:0015252,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=proton channel activity|0015252||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343637.1;locus_tag=ACYKK2_000616;product=MotA/TolQ/ExbB proton channel family protein;protein_id=HIH2231292.1;transl_table=11 DBLQKW010000009.1 tpg gene 3899 4309 . + . ID=gene-ACYKK2_000617;Name=ACYKK2_000617;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000617 DBLQKW010000009.1 Protein Homology CDS 3899 4309 . + 0 ID=cds-HIH2231293.1;Parent=gene-ACYKK2_000617;Dbxref=NCBI_GP:HIH2231293.1;Name=HIH2231293.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343638.1;locus_tag=ACYKK2_000617;product=biopolymer transporter ExbD;protein_id=HIH2231293.1;transl_table=11 DBLQKW010000009.1 tpg gene 4311 5057 . + . ID=gene-ACYKK2_000618;Name=ACYKK2_000618;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000618 DBLQKW010000009.1 Protein Homology CDS 4311 5057 . + 0 ID=cds-HIH2231294.1;Parent=gene-ACYKK2_000618;Dbxref=NCBI_GP:HIH2231294.1;Name=HIH2231294.1;Ontology_term=GO:0031992,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=energy transducer activity|0031992||IEA;inference=COORDINATES: protein motif:HMM:TIGR01352.1;locus_tag=ACYKK2_000618;product=energy transducer TonB family protein;protein_id=HIH2231294.1;transl_table=11 DBLQKW010000009.1 tpg gene 5113 6312 . + . ID=gene-ACYKK2_000619;Name=ACYKK2_000619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000619 DBLQKW010000009.1 Protein Homology CDS 5113 6312 . + 0 ID=cds-HIH2231295.1;Parent=gene-ACYKK2_000619;Dbxref=NCBI_GP:HIH2231295.1;Name=HIH2231295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002893872.1;locus_tag=ACYKK2_000619;product=putative transporter;protein_id=HIH2231295.1;transl_table=11 DBLQKW010000009.1 tpg gene 6411 7769 . + . ID=gene-ACYKK2_000620;Name=ACYKK2_000620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000620 DBLQKW010000009.1 Protein Homology CDS 6411 7769 . + 0 ID=cds-HIH2231296.1;Parent=gene-ACYKK2_000620;Dbxref=NCBI_GP:HIH2231296.1;Name=HIH2231296.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343641.1;locus_tag=ACYKK2_000620;product=hemolysin family protein;protein_id=HIH2231296.1;transl_table=11 DBLQKW010000009.1 tpg gene 7782 8966 . - . ID=gene-ACYKK2_000621;Name=ACYKK2_000621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000621 DBLQKW010000009.1 Protein Homology CDS 7782 8966 . - 0 ID=cds-HIH2231297.1;Parent=gene-ACYKK2_000621;Dbxref=NCBI_GP:HIH2231297.1;Name=HIH2231297.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002851935.1;locus_tag=ACYKK2_000621;product=metallophosphoesterase;protein_id=HIH2231297.1;transl_table=11 DBLQKW010000009.1 tpg gene 8976 9185 . - . ID=gene-ACYKK2_000622;Name=ACYKK2_000622;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000622 DBLQKW010000009.1 Protein Homology CDS 8976 9185 . - 0 ID=cds-HIH2231298.1;Parent=gene-ACYKK2_000622;Dbxref=NCBI_GP:HIH2231298.1;Name=HIH2231298.1;Ontology_term=GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011989570.1;locus_tag=ACYKK2_000622;product=alkylphosphonate utilization protein;protein_id=HIH2231298.1;transl_table=11 DBLQKW010000009.1 tpg gene 9178 9897 . - . ID=gene-ACYKK2_000623;Name=ACYKK2_000623;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000623 DBLQKW010000009.1 Protein Homology CDS 9178 9897 . - 0 ID=cds-HIH2231299.1;Parent=gene-ACYKK2_000623;Dbxref=NCBI_GP:HIH2231299.1;Name=HIH2231299.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343644.1;locus_tag=ACYKK2_000623;product=TerC family protein;protein_id=HIH2231299.1;transl_table=11 DBLQKW010000009.1 tpg gene 9969 10535 . - . ID=gene-ACYKK2_000624;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=ACYKK2_000624 DBLQKW010000009.1 Protein Homology CDS 9969 10535 . - 0 ID=cds-HIH2231300.1;Parent=gene-ACYKK2_000624;Dbxref=NCBI_GP:HIH2231300.1;Name=HIH2231300.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343645.1;locus_tag=ACYKK2_000624;product=phosphoribosylglycinamide formyltransferase;protein_id=HIH2231300.1;transl_table=11 DBLQKW010000009.1 tpg gene 10526 11896 . - . ID=gene-ACYKK2_000625;Name=ACYKK2_000625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000625 DBLQKW010000009.1 Protein Homology CDS 10526 11896 . - 0 ID=cds-HIH2231301.1;Parent=gene-ACYKK2_000625;Dbxref=NCBI_GP:HIH2231301.1;Name=HIH2231301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343646.1;locus_tag=ACYKK2_000625;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=HIH2231301.1;transl_table=11 DBLQKW010000009.1 tpg gene 11880 12578 . - . ID=gene-ACYKK2_000626;Name=ACYKK2_000626;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000626 DBLQKW010000009.1 Protein Homology CDS 11880 12578 . - 0 ID=cds-HIH2231302.1;Parent=gene-ACYKK2_000626;Dbxref=NCBI_GP:HIH2231302.1;Name=HIH2231302.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343647.1;locus_tag=ACYKK2_000626;product=NYN domain-containing protein;protein_id=HIH2231302.1;transl_table=11 DBLQKW010000009.1 tpg gene 12580 14085 . - . ID=gene-ACYKK2_000627;Name=ACYKK2_000627;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000627 DBLQKW010000009.1 Protein Homology CDS 12580 14085 . - 0 ID=cds-HIH2231303.1;Parent=gene-ACYKK2_000627;Dbxref=NCBI_GP:HIH2231303.1;Name=HIH2231303.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343648.1;locus_tag=ACYKK2_000627;product=YifB family Mg chelatase-like AAA ATPase;protein_id=HIH2231303.1;transl_table=11 DBLQKW010000009.1 tpg gene 14082 14609 . - . ID=gene-ACYKK2_000628;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=ACYKK2_000628 DBLQKW010000009.1 Protein Homology CDS 14082 14609 . - 0 ID=cds-HIH2231304.1;Parent=gene-ACYKK2_000628;Dbxref=NCBI_GP:HIH2231304.1;Name=HIH2231304.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343649.1;locus_tag=ACYKK2_000628;product=peptide deformylase;protein_id=HIH2231304.1;transl_table=11 DBLQKW010000009.1 tpg gene 14645 15229 . - . ID=gene-ACYKK2_000629;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=ACYKK2_000629 DBLQKW010000009.1 Protein Homology CDS 14645 15229 . - 0 ID=cds-HIH2231305.1;Parent=gene-ACYKK2_000629;Dbxref=NCBI_GP:HIH2231305.1;Name=HIH2231305.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343650.1;locus_tag=ACYKK2_000629;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=HIH2231305.1;transl_table=11 DBLQKW010000009.1 tpg gene 15229 16563 . - . ID=gene-ACYKK2_000630;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=ACYKK2_000630 DBLQKW010000009.1 Protein Homology CDS 15229 16563 . - 0 ID=cds-HIH2231306.1;Parent=gene-ACYKK2_000630;Dbxref=NCBI_GP:HIH2231306.1;Name=HIH2231306.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343651.1;locus_tag=ACYKK2_000630;product=trigger factor;protein_id=HIH2231306.1;transl_table=11 DBLQKW010000009.1 tpg gene 16706 17278 . + . ID=gene-ACYKK2_000631;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=ACYKK2_000631 DBLQKW010000009.1 Protein Homology CDS 16706 17278 . + 0 ID=cds-HIH2231307.1;Parent=gene-ACYKK2_000631;Dbxref=NCBI_GP:HIH2231307.1;Name=HIH2231307.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343652.1;locus_tag=ACYKK2_000631;product=GTP cyclohydrolase I FolE;protein_id=HIH2231307.1;transl_table=11 DBLQKW010000009.1 tpg gene 17278 18663 . + . ID=gene-ACYKK2_000632;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=ACYKK2_000632 DBLQKW010000009.1 Protein Homology CDS 17278 18663 . + 0 ID=cds-HIH2231308.1;Parent=gene-ACYKK2_000632;Dbxref=NCBI_GP:HIH2231308.1;Name=HIH2231308.1;Ontology_term=GO:0030254,GO:0005524,GO:0016887,GO:0030257;gbkey=CDS;gene=fliI;go_component=type III protein secretion system complex|0030257||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343653.1;locus_tag=ACYKK2_000632;product=flagellar protein export ATPase FliI;protein_id=HIH2231308.1;transl_table=11 DBLQKW010000009.1 tpg gene 18666 20003 . - . ID=gene-ACYKK2_000633;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=ACYKK2_000633 DBLQKW010000009.1 Protein Homology CDS 18666 20003 . - 0 ID=cds-HIH2231309.1;Parent=gene-ACYKK2_000633;Dbxref=NCBI_GP:HIH2231309.1;Name=HIH2231309.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343654.1;locus_tag=ACYKK2_000633;product=amidophosphoribosyltransferase;protein_id=HIH2231309.1;transl_table=11 DBLQKW010000009.1 tpg gene 20005 20733 . - . ID=gene-ACYKK2_000634;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=ACYKK2_000634 DBLQKW010000009.1 Protein Homology CDS 20005 20733 . - 0 ID=cds-HIH2231310.1;Parent=gene-ACYKK2_000634;Dbxref=NCBI_GP:HIH2231310.1;Name=HIH2231310.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343655.1;locus_tag=ACYKK2_000634;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=HIH2231310.1;transl_table=11 DBLQKW010000009.1 tpg gene 20796 21977 . - . ID=gene-ACYKK2_000635;Name=ACYKK2_000635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000635 DBLQKW010000009.1 Protein Homology CDS 20796 21977 . - 0 ID=cds-HIH2231311.1;Parent=gene-ACYKK2_000635;Dbxref=NCBI_GP:HIH2231311.1;Name=HIH2231311.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343656.1;locus_tag=ACYKK2_000635;product=replication-associated recombination protein A;protein_id=HIH2231311.1;transl_table=11 DBLQKW010000009.1 tpg gene 21977 23104 . - . ID=gene-ACYKK2_000636;Name=ACYKK2_000636;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000636 DBLQKW010000009.1 GeneMarkS-2+ CDS 21977 23104 . - 0 ID=cds-HIH2231312.1;Parent=gene-ACYKK2_000636;Dbxref=NCBI_GP:HIH2231312.1;Name=HIH2231312.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_000636;product=hypothetical protein;protein_id=HIH2231312.1;transl_table=11 DBLQKW010000009.1 tpg gene 23239 23586 . - . ID=gene-ACYKK2_000637;Name=ACYKK2_000637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000637 DBLQKW010000009.1 Protein Homology CDS 23239 23586 . - 0 ID=cds-HIH2231313.1;Parent=gene-ACYKK2_000637;Dbxref=NCBI_GP:HIH2231313.1;Name=HIH2231313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343658.1;locus_tag=ACYKK2_000637;product=hypothetical protein;protein_id=HIH2231313.1;transl_table=11 DBLQKW010000009.1 tpg pseudogene 23685 24258 . - . ID=gene-ACYKK2_000638;Name=ACYKK2_000638;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_000638;pseudo=true DBLQKW010000009.1 Protein Homology CDS 23685 24258 . - 0 ID=cds-ACYKK2_000638;Parent=gene-ACYKK2_000638;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002825721.1;locus_tag=ACYKK2_000638;product=YiiX/YebB-like N1pC/P60 family cysteine hydrolase;pseudo=true;transl_table=11 DBLQKW010000009.1 tpg gene 24260 24583 . - . ID=gene-ACYKK2_000639;Name=ACYKK2_000639;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000639 DBLQKW010000009.1 Protein Homology CDS 24260 24583 . - 0 ID=cds-HIH2231314.1;Parent=gene-ACYKK2_000639;Dbxref=NCBI_GP:HIH2231314.1;Name=HIH2231314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002867119.1;locus_tag=ACYKK2_000639;product=DUF4878 domain-containing protein;protein_id=HIH2231314.1;transl_table=11 DBLQKW010000009.1 tpg gene 24827 26173 . + . ID=gene-ACYKK2_000640;Name=ACYKK2_000640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000640 DBLQKW010000009.1 Protein Homology CDS 24827 26173 . + 0 ID=cds-HIH2231315.1;Parent=gene-ACYKK2_000640;Dbxref=NCBI_GP:HIH2231315.1;Name=HIH2231315.1;Ontology_term=GO:0046942,GO:1905039,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=carboxylic acid transport|0046942||IEA,carboxylic acid transmembrane transport|1905039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343661.1;locus_tag=ACYKK2_000640;product=CitMHS family transporter;protein_id=HIH2231315.1;transl_table=11 DBLQKW010000009.1 tpg gene 26357 28354 . + . ID=gene-ACYKK2_000641;Name=ACYKK2_000641;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000641 DBLQKW010000009.1 Protein Homology CDS 26357 28354 . + 0 ID=cds-HIH2231316.1;Parent=gene-ACYKK2_000641;Dbxref=NCBI_GP:HIH2231316.1;Name=HIH2231316.1;Ontology_term=GO:0006857,GO:0035673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oligopeptide transmembrane transporter activity|0035673||IEA;go_process=oligopeptide transport|0006857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343662.1;locus_tag=ACYKK2_000641;product=OPT family oligopeptide transporter;protein_id=HIH2231316.1;transl_table=11 DBLQKW010000009.1 tpg gene 28428 29231 . + . ID=gene-ACYKK2_000642;Name=uppP;gbkey=Gene;gene=uppP;gene_biotype=protein_coding;locus_tag=ACYKK2_000642 DBLQKW010000009.1 Protein Homology CDS 28428 29231 . + 0 ID=cds-HIH2231317.1;Parent=gene-ACYKK2_000642;Dbxref=NCBI_GP:HIH2231317.1;Name=HIH2231317.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=uppP;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343663.1;locus_tag=ACYKK2_000642;product=undecaprenyl-diphosphate phosphatase;protein_id=HIH2231317.1;transl_table=11 DBLQKW010000009.1 tpg gene 29362 31170 . + . ID=gene-ACYKK2_000643;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=ACYKK2_000643 DBLQKW010000009.1 Protein Homology CDS 29362 31170 . + 0 ID=cds-HIH2231318.1;Parent=gene-ACYKK2_000643;Dbxref=NCBI_GP:HIH2231318.1;Name=HIH2231318.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343664.1;locus_tag=ACYKK2_000643;product=threonine--tRNA ligase;protein_id=HIH2231318.1;transl_table=11 DBLQKW010000009.1 tpg gene 31167 31685 . + . ID=gene-ACYKK2_000644;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=ACYKK2_000644 DBLQKW010000009.1 Protein Homology CDS 31167 31685 . + 0 ID=cds-HIH2231319.1;Parent=gene-ACYKK2_000644;Dbxref=NCBI_GP:HIH2231319.1;Name=HIH2231319.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343665.1;locus_tag=ACYKK2_000644;product=translation initiation factor IF-3;protein_id=HIH2231319.1;transl_table=11 DBLQKW010000009.1 tpg gene 31724 32815 . + . ID=gene-ACYKK2_000645;Name=ACYKK2_000645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000645 DBLQKW010000009.1 Protein Homology CDS 31724 32815 . + 0 ID=cds-HIH2231320.1;Parent=gene-ACYKK2_000645;Dbxref=NCBI_GP:HIH2231320.1;Name=HIH2231320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343666.1;locus_tag=ACYKK2_000645;product=DNA adenine methylase;protein_id=HIH2231320.1;transl_table=11 DBLQKW010000009.1 tpg pseudogene 32857 36308 . + . ID=gene-ACYKK2_000646;Name=ACYKK2_000646;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_000646;pseudo=true DBLQKW010000009.1 Protein Homology CDS 32857 36308 . + 0 ID=cds-ACYKK2_000646;Parent=gene-ACYKK2_000646;Note=frameshifted%3B internal stop;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_172669436.1;locus_tag=ACYKK2_000646;product=S6 family peptidase;pseudo=true;transl_table=11 DBLQKW010000009.1 tpg gene 36389 37417 . + . ID=gene-ACYKK2_000647;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=ACYKK2_000647 DBLQKW010000009.1 Protein Homology CDS 36389 37417 . + 0 ID=cds-HIH2231321.1;Parent=gene-ACYKK2_000647;Dbxref=NCBI_GP:HIH2231321.1;Name=HIH2231321.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343667.1;locus_tag=ACYKK2_000647;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=HIH2231321.1;transl_table=11 DBLQKW010000009.1 tpg gene 37427 37873 . + . ID=gene-ACYKK2_000648;Name=ACYKK2_000648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000648 DBLQKW010000009.1 Protein Homology CDS 37427 37873 . + 0 ID=cds-HIH2231322.1;Parent=gene-ACYKK2_000648;Dbxref=NCBI_GP:HIH2231322.1;Name=HIH2231322.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343668.1;locus_tag=ACYKK2_000648;product=GNAT family N-acetyltransferase;protein_id=HIH2231322.1;transl_table=11 DBLQKW010000009.1 tpg gene 37877 38722 . + . ID=gene-ACYKK2_000649;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=ACYKK2_000649 DBLQKW010000009.1 Protein Homology CDS 37877 38722 . + 0 ID=cds-HIH2231323.1;Parent=gene-ACYKK2_000649;Dbxref=NCBI_GP:HIH2231323.1;Name=HIH2231323.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343669.1;locus_tag=ACYKK2_000649;product=acetylglutamate kinase;protein_id=HIH2231323.1;transl_table=11 DBLQKW010000009.1 tpg gene 38726 39913 . + . ID=gene-ACYKK2_000650;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;locus_tag=ACYKK2_000650 DBLQKW010000009.1 Protein Homology CDS 38726 39913 . + 0 ID=cds-HIH2231324.1;Parent=gene-ACYKK2_000650;Dbxref=NCBI_GP:HIH2231324.1;Name=HIH2231324.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;gene=argD;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343670.1;locus_tag=ACYKK2_000650;product=aspartate aminotransferase family protein;protein_id=HIH2231324.1;transl_table=11 DBLQKW010000009.1 tpg gene 39933 40562 . - . ID=gene-ACYKK2_000651;Name=pcm;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=ACYKK2_000651 DBLQKW010000009.1 Protein Homology CDS 39933 40562 . - 0 ID=cds-HIH2231325.1;Parent=gene-ACYKK2_000651;Dbxref=NCBI_GP:HIH2231325.1;Name=HIH2231325.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;gene=pcm;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343671.1;locus_tag=ACYKK2_000651;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=HIH2231325.1;transl_table=11 DBLQKW010000009.1 tpg gene 40651 41199 . + . ID=gene-ACYKK2_000652;Name=ACYKK2_000652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000652 DBLQKW010000009.1 Protein Homology CDS 40651 41199 . + 0 ID=cds-HIH2231326.1;Parent=gene-ACYKK2_000652;Dbxref=NCBI_GP:HIH2231326.1;Name=HIH2231326.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343672.1;locus_tag=ACYKK2_000652;product=gamma carbonic anhydrase family protein;protein_id=HIH2231326.1;transl_table=11 DBLQKW010000009.1 tpg gene 41168 42541 . - . ID=gene-ACYKK2_000653;Name=ACYKK2_000653;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000653 DBLQKW010000009.1 Protein Homology CDS 41168 42541 . - 0 ID=cds-HIH2231327.1;Parent=gene-ACYKK2_000653;Dbxref=NCBI_GP:HIH2231327.1;Name=HIH2231327.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343673.1;locus_tag=ACYKK2_000653;product=nicotinate phosphoribosyltransferase;protein_id=HIH2231327.1;transl_table=11 DBLQKW010000009.1 tpg gene 42528 43550 . - . ID=gene-ACYKK2_000654;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=ACYKK2_000654 DBLQKW010000009.1 Protein Homology CDS 42528 43550 . - 0 ID=cds-HIH2231328.1;Parent=gene-ACYKK2_000654;Dbxref=NCBI_GP:HIH2231328.1;Name=HIH2231328.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343674.1;locus_tag=ACYKK2_000654;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=HIH2231328.1;transl_table=11 DBLQKW010000009.1 tpg gene 43553 43975 . - . ID=gene-ACYKK2_000655;Name=ACYKK2_000655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000655 DBLQKW010000009.1 Protein Homology CDS 43553 43975 . - 0 ID=cds-HIH2231329.1;Parent=gene-ACYKK2_000655;Dbxref=NCBI_GP:HIH2231329.1;Name=HIH2231329.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002867136.1;locus_tag=ACYKK2_000655;product=RDD family protein;protein_id=HIH2231329.1;transl_table=11 DBLQKW010000009.1 tpg gene 43976 44584 . - . ID=gene-ACYKK2_000656;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=ACYKK2_000656 DBLQKW010000009.1 Protein Homology CDS 43976 44584 . - 0 ID=cds-HIH2231330.1;Parent=gene-ACYKK2_000656;Dbxref=NCBI_GP:HIH2231330.1;Name=HIH2231330.1;Ontology_term=GO:0019856,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343676.1;locus_tag=ACYKK2_000656;product=orotate phosphoribosyltransferase;protein_id=HIH2231330.1;transl_table=11 DBLQKW010000009.1 tpg gene 44587 45150 . - . ID=gene-ACYKK2_000657;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=ACYKK2_000657 DBLQKW010000009.1 Protein Homology CDS 44587 45150 . - 0 ID=cds-HIH2231331.1;Parent=gene-ACYKK2_000657;Dbxref=NCBI_GP:HIH2231331.1;Name=HIH2231331.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343677.1;locus_tag=ACYKK2_000657;product=ribosome recycling factor;protein_id=HIH2231331.1;transl_table=11 DBLQKW010000009.1 tpg gene 45160 45531 . - . ID=gene-ACYKK2_000658;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=ACYKK2_000658 DBLQKW010000009.1 Protein Homology CDS 45160 45531 . - 0 ID=cds-HIH2231332.1;Parent=gene-ACYKK2_000658;Dbxref=NCBI_GP:HIH2231332.1;Name=HIH2231332.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343678.1;locus_tag=ACYKK2_000658;product=preprotein translocase subunit SecG;protein_id=HIH2231332.1;transl_table=11 DBLQKW010000009.1 tpg gene 45635 46330 . - . ID=gene-ACYKK2_000659;Name=ACYKK2_000659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000659 DBLQKW010000009.1 Protein Homology CDS 45635 46330 . - 0 ID=cds-HIH2231333.1;Parent=gene-ACYKK2_000659;Dbxref=NCBI_GP:HIH2231333.1;Name=HIH2231333.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343679.1;locus_tag=ACYKK2_000659;product=Bax inhibitor-1/YccA family protein;protein_id=HIH2231333.1;transl_table=11 DBLQKW010000009.1 tpg gene 46491 47126 . + . ID=gene-ACYKK2_000660;Name=cynT;gbkey=Gene;gene=cynT;gene_biotype=protein_coding;locus_tag=ACYKK2_000660 DBLQKW010000009.1 Protein Homology CDS 46491 47126 . + 0 ID=cds-HIH2231334.1;Parent=gene-ACYKK2_000660;Dbxref=NCBI_GP:HIH2231334.1;Name=HIH2231334.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;gene=cynT;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343680.1;locus_tag=ACYKK2_000660;product=carbonic anhydrase;protein_id=HIH2231334.1;transl_table=11 DBLQKW010000009.1 tpg gene 47123 49006 . + . ID=gene-ACYKK2_000661;Name=ACYKK2_000661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000661 DBLQKW010000009.1 Protein Homology CDS 47123 49006 . + 0 ID=cds-HIH2231335.1;Parent=gene-ACYKK2_000661;Dbxref=NCBI_GP:HIH2231335.1;Name=HIH2231335.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343681.1;locus_tag=ACYKK2_000661;product=mechanosensitive ion channel family protein;protein_id=HIH2231335.1;transl_table=11 DBLQKW010000009.1 tpg gene 49029 50000 . - . ID=gene-ACYKK2_000662;Name=ACYKK2_000662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000662 DBLQKW010000009.1 Protein Homology CDS 49029 50000 . - 0 ID=cds-HIH2231336.1;Parent=gene-ACYKK2_000662;Dbxref=NCBI_GP:HIH2231336.1;Name=HIH2231336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343682.1;locus_tag=ACYKK2_000662;product=iron-sulfur cluster assembly scaffold protein NifU;protein_id=HIH2231336.1;transl_table=11 DBLQKW010000009.1 tpg gene 50010 51191 . - . ID=gene-ACYKK2_000663;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=ACYKK2_000663 DBLQKW010000009.1 Protein Homology CDS 50010 51191 . - 0 ID=cds-HIH2231337.1;Parent=gene-ACYKK2_000663;Dbxref=NCBI_GP:HIH2231337.1;Name=HIH2231337.1;Ontology_term=GO:0006534,GO:0031071;gbkey=CDS;gene=iscS;go_function=cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343683.1;locus_tag=ACYKK2_000663;product=NifS family cysteine desulfurase;protein_id=HIH2231337.1;transl_table=11 DBLQKW010000009.1 tpg gene 51369 51770 . - . ID=gene-ACYKK2_000664;Name=ACYKK2_000664;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000664 DBLQKW010000009.1 Protein Homology CDS 51369 51770 . - 0 ID=cds-HIH2231338.1;Parent=gene-ACYKK2_000664;Dbxref=NCBI_GP:HIH2231338.1;Name=HIH2231338.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343684.1;locus_tag=ACYKK2_000664;product=hemerythrin domain-containing protein;protein_id=HIH2231338.1;transl_table=11 ##sequence-region DBLQKW010000010.1 1 50696 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000010.1 tpg region 1 50696 . + . ID=DBLQKW010000010.1:1..50696;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000010.1 tpg gene 155 1153 . - . ID=gene-ACYKK2_000665;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=ACYKK2_000665 DBLQKW010000010.1 Protein Homology CDS 155 1153 . - 0 ID=cds-HIH2231339.1;Parent=gene-ACYKK2_000665;Dbxref=NCBI_GP:HIH2231339.1;Name=HIH2231339.1;gbkey=CDS;gene=mnmH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343934.1;locus_tag=ACYKK2_000665;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=HIH2231339.1;transl_table=11 DBLQKW010000010.1 tpg gene 1143 1628 . - . ID=gene-ACYKK2_000666;Name=ACYKK2_000666;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000666 DBLQKW010000010.1 Protein Homology CDS 1143 1628 . - 0 ID=cds-HIH2231340.1;Parent=gene-ACYKK2_000666;Dbxref=NCBI_GP:HIH2231340.1;Name=HIH2231340.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343933.1;locus_tag=ACYKK2_000666;product=HIT family protein;protein_id=HIH2231340.1;transl_table=11 DBLQKW010000010.1 tpg gene 1639 2415 . - . ID=gene-ACYKK2_000667;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=ACYKK2_000667 DBLQKW010000010.1 Protein Homology CDS 1639 2415 . - 0 ID=cds-HIH2231341.1;Parent=gene-ACYKK2_000667;Dbxref=NCBI_GP:HIH2231341.1;Name=HIH2231341.1;gbkey=CDS;gene=trpC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343932.1;locus_tag=ACYKK2_000667;product=indole-3-glycerol phosphate synthase TrpC;protein_id=HIH2231341.1;transl_table=11 DBLQKW010000010.1 tpg gene 2412 3689 . - . ID=gene-ACYKK2_000668;Name=ACYKK2_000668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000668 DBLQKW010000010.1 Protein Homology CDS 2412 3689 . - 0 ID=cds-HIH2231342.1;Parent=gene-ACYKK2_000668;Dbxref=NCBI_GP:HIH2231342.1;Name=HIH2231342.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343931.1;locus_tag=ACYKK2_000668;product=tetratricopeptide repeat protein;protein_id=HIH2231342.1;transl_table=11 DBLQKW010000010.1 tpg gene 3662 4036 . - . ID=gene-ACYKK2_000669;Name=ACYKK2_000669;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000669 DBLQKW010000010.1 Protein Homology CDS 3662 4036 . - 0 ID=cds-HIH2231343.1;Parent=gene-ACYKK2_000669;Dbxref=NCBI_GP:HIH2231343.1;Name=HIH2231343.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343930.1;locus_tag=ACYKK2_000669;product=YkgJ family cysteine cluster protein;protein_id=HIH2231343.1;transl_table=11 DBLQKW010000010.1 tpg gene 4026 4727 . - . ID=gene-ACYKK2_000670;Name=ACYKK2_000670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000670 DBLQKW010000010.1 Protein Homology CDS 4026 4727 . - 0 ID=cds-HIH2231344.1;Parent=gene-ACYKK2_000670;Dbxref=NCBI_GP:HIH2231344.1;Name=HIH2231344.1;Ontology_term=GO:0032259,GO:0008170,GO:0008757,GO:0016430,GO:1904047;gbkey=CDS;go_function=N-methyltransferase activity|0008170||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343929.1;locus_tag=ACYKK2_000670;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=HIH2231344.1;transl_table=11 DBLQKW010000010.1 tpg gene 4733 4882 . - . ID=gene-ACYKK2_000671;Name=ACYKK2_000671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000671 DBLQKW010000010.1 Protein Homology CDS 4733 4882 . - 0 ID=cds-HIH2231345.1;Parent=gene-ACYKK2_000671;Dbxref=NCBI_GP:HIH2231345.1;Name=HIH2231345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343928.1;locus_tag=ACYKK2_000671;product=hypothetical protein;protein_id=HIH2231345.1;transl_table=11 DBLQKW010000010.1 tpg gene 4900 4976 . - . ID=gene-ACYKK2_000672;Name=ACYKK2_000672;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_000672 DBLQKW010000010.1 tRNAscan-SE tRNA 4900 4976 . - . ID=rna-ACYKK2_000672;Parent=gene-ACYKK2_000672;anticodon=(pos:complement(4940..4942));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_000672;product=tRNA-Arg DBLQKW010000010.1 tRNAscan-SE exon 4900 4976 . - . ID=exon-ACYKK2_000672-1;Parent=rna-ACYKK2_000672;anticodon=(pos:complement(4940..4942));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_000672;product=tRNA-Arg DBLQKW010000010.1 tpg gene 5005 7080 . - . ID=gene-ACYKK2_000673;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=ACYKK2_000673 DBLQKW010000010.1 Protein Homology CDS 5005 7080 . - 0 ID=cds-HIH2231346.1;Parent=gene-ACYKK2_000673;Dbxref=NCBI_GP:HIH2231346.1;Name=HIH2231346.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343927.1;locus_tag=ACYKK2_000673;product=elongation factor G;protein_id=HIH2231346.1;transl_table=11 DBLQKW010000010.1 tpg gene 7094 7564 . - . ID=gene-ACYKK2_000674;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=ACYKK2_000674 DBLQKW010000010.1 Protein Homology CDS 7094 7564 . - 0 ID=cds-HIH2231347.1;Parent=gene-ACYKK2_000674;Dbxref=NCBI_GP:HIH2231347.1;Name=HIH2231347.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343926.1;locus_tag=ACYKK2_000674;product=30S ribosomal protein S7;protein_id=HIH2231347.1;transl_table=11 DBLQKW010000010.1 tpg gene 7633 8019 . - . ID=gene-ACYKK2_000675;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=ACYKK2_000675 DBLQKW010000010.1 Protein Homology CDS 7633 8019 . - 0 ID=cds-HIH2231348.1;Parent=gene-ACYKK2_000675;Dbxref=NCBI_GP:HIH2231348.1;Name=HIH2231348.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343925.1;locus_tag=ACYKK2_000675;product=30S ribosomal protein S12;protein_id=HIH2231348.1;transl_table=11 DBLQKW010000010.1 tpg gene 8139 12692 . - . ID=gene-ACYKK2_000676;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=ACYKK2_000676 DBLQKW010000010.1 Protein Homology CDS 8139 12692 . - 0 ID=cds-HIH2231349.1;Parent=gene-ACYKK2_000676;Dbxref=NCBI_GP:HIH2231349.1;Name=HIH2231349.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343913.1;locus_tag=ACYKK2_000676;product=DNA-directed RNA polymerase subunit beta';protein_id=HIH2231349.1;transl_table=11 DBLQKW010000010.1 tpg gene 12685 16821 . - . ID=gene-ACYKK2_000677;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=ACYKK2_000677 DBLQKW010000010.1 Protein Homology CDS 12685 16821 . - 0 ID=cds-HIH2231350.1;Parent=gene-ACYKK2_000677;Dbxref=NCBI_GP:HIH2231350.1;Name=HIH2231350.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343912.1;locus_tag=ACYKK2_000677;product=DNA-directed RNA polymerase subunit beta;protein_id=HIH2231350.1;transl_table=11 DBLQKW010000010.1 tpg gene 16930 17307 . - . ID=gene-ACYKK2_000678;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=ACYKK2_000678 DBLQKW010000010.1 Protein Homology CDS 16930 17307 . - 0 ID=cds-HIH2231351.1;Parent=gene-ACYKK2_000678;Dbxref=NCBI_GP:HIH2231351.1;Name=HIH2231351.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002858569.1;locus_tag=ACYKK2_000678;product=50S ribosomal protein L7/L12;protein_id=HIH2231351.1;transl_table=11 DBLQKW010000010.1 tpg gene 17328 17807 . - . ID=gene-ACYKK2_000679;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=ACYKK2_000679 DBLQKW010000010.1 Protein Homology CDS 17328 17807 . - 0 ID=cds-HIH2231352.1;Parent=gene-ACYKK2_000679;Dbxref=NCBI_GP:HIH2231352.1;Name=HIH2231352.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343910.1;locus_tag=ACYKK2_000679;product=50S ribosomal protein L10;protein_id=HIH2231352.1;transl_table=11 DBLQKW010000010.1 tpg gene 17959 18660 . - . ID=gene-ACYKK2_000680;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=ACYKK2_000680 DBLQKW010000010.1 Protein Homology CDS 17959 18660 . - 0 ID=cds-HIH2231353.1;Parent=gene-ACYKK2_000680;Dbxref=NCBI_GP:HIH2231353.1;Name=HIH2231353.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343909.1;locus_tag=ACYKK2_000680;product=50S ribosomal protein L1;protein_id=HIH2231353.1;transl_table=11 DBLQKW010000010.1 tpg gene 18715 19140 . - . ID=gene-ACYKK2_000681;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=ACYKK2_000681 DBLQKW010000010.1 Protein Homology CDS 18715 19140 . - 0 ID=cds-HIH2231354.1;Parent=gene-ACYKK2_000681;Dbxref=NCBI_GP:HIH2231354.1;Name=HIH2231354.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343908.1;locus_tag=ACYKK2_000681;product=50S ribosomal protein L11;protein_id=HIH2231354.1;transl_table=11 DBLQKW010000010.1 tpg gene 19166 19699 . - . ID=gene-ACYKK2_000682;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=ACYKK2_000682 DBLQKW010000010.1 Protein Homology CDS 19166 19699 . - 0 ID=cds-HIH2231355.1;Parent=gene-ACYKK2_000682;Dbxref=NCBI_GP:HIH2231355.1;Name=HIH2231355.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343907.1;locus_tag=ACYKK2_000682;product=transcription termination/antitermination protein NusG;protein_id=HIH2231355.1;transl_table=11 DBLQKW010000010.1 tpg gene 19709 19888 . - . ID=gene-ACYKK2_000683;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=ACYKK2_000683 DBLQKW010000010.1 Protein Homology CDS 19709 19888 . - 0 ID=cds-HIH2231356.1;Parent=gene-ACYKK2_000683;Dbxref=NCBI_GP:HIH2231356.1;Name=HIH2231356.1;Ontology_term=GO:0009306,GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secE;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343906.1;locus_tag=ACYKK2_000683;product=preprotein translocase subunit SecE;protein_id=HIH2231356.1;transl_table=11 DBLQKW010000010.1 tpg gene 19907 19982 . - . ID=gene-ACYKK2_000684;Name=ACYKK2_000684;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_000684 DBLQKW010000010.1 tRNAscan-SE tRNA 19907 19982 . - . ID=rna-ACYKK2_000684;Parent=gene-ACYKK2_000684;anticodon=(pos:complement(19947..19949));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_000684;product=tRNA-Trp DBLQKW010000010.1 tRNAscan-SE exon 19907 19982 . - . ID=exon-ACYKK2_000684-1;Parent=rna-ACYKK2_000684;anticodon=(pos:complement(19947..19949));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_000684;product=tRNA-Trp DBLQKW010000010.1 tpg gene 19995 20153 . - . ID=gene-ACYKK2_000685;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=ACYKK2_000685 DBLQKW010000010.1 Protein Homology CDS 19995 20153 . - 0 ID=cds-HIH2231357.1;Parent=gene-ACYKK2_000685;Dbxref=NCBI_GP:HIH2231357.1;Name=HIH2231357.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343905.1;locus_tag=ACYKK2_000685;product=50S ribosomal protein L33;protein_id=HIH2231357.1;transl_table=11 DBLQKW010000010.1 tpg gene 20206 21405 . - . ID=gene-ACYKK2_000686;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=ACYKK2_000686 DBLQKW010000010.1 Protein Homology CDS 20206 21405 . - 0 ID=cds-HIH2231358.1;Parent=gene-ACYKK2_000686;Dbxref=NCBI_GP:HIH2231358.1;Name=HIH2231358.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343904.1;locus_tag=ACYKK2_000686;product=elongation factor Tu;protein_id=HIH2231358.1;transl_table=11 DBLQKW010000010.1 tpg gene 21474 21548 . - . ID=gene-ACYKK2_000687;Name=ACYKK2_000687;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_000687 DBLQKW010000010.1 tRNAscan-SE tRNA 21474 21548 . - . ID=rna-ACYKK2_000687;Parent=gene-ACYKK2_000687;anticodon=(pos:complement(21514..21516));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_000687;product=tRNA-Thr DBLQKW010000010.1 tRNAscan-SE exon 21474 21548 . - . ID=exon-ACYKK2_000687-1;Parent=rna-ACYKK2_000687;anticodon=(pos:complement(21514..21516));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_000687;product=tRNA-Thr DBLQKW010000010.1 tpg gene 21653 21729 . - . ID=gene-ACYKK2_000688;Name=ACYKK2_000688;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_000688 DBLQKW010000010.1 tRNAscan-SE tRNA 21653 21729 . - . ID=rna-ACYKK2_000688;Parent=gene-ACYKK2_000688;anticodon=(pos:complement(21693..21695));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_000688;product=tRNA-Gly DBLQKW010000010.1 tRNAscan-SE exon 21653 21729 . - . ID=exon-ACYKK2_000688-1;Parent=rna-ACYKK2_000688;anticodon=(pos:complement(21693..21695));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_000688;product=tRNA-Gly DBLQKW010000010.1 tpg gene 21736 21821 . - . ID=gene-ACYKK2_000689;Name=ACYKK2_000689;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_000689 DBLQKW010000010.1 tRNAscan-SE tRNA 21736 21821 . - . ID=rna-ACYKK2_000689;Parent=gene-ACYKK2_000689;anticodon=(pos:complement(21785..21787));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_000689;product=tRNA-Tyr DBLQKW010000010.1 tRNAscan-SE exon 21736 21821 . - . ID=exon-ACYKK2_000689-1;Parent=rna-ACYKK2_000689;anticodon=(pos:complement(21785..21787));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_000689;product=tRNA-Tyr DBLQKW010000010.1 tpg gene 21871 21946 . - . ID=gene-ACYKK2_000690;Name=ACYKK2_000690;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_000690 DBLQKW010000010.1 tRNAscan-SE tRNA 21871 21946 . - . ID=rna-ACYKK2_000690;Parent=gene-ACYKK2_000690;anticodon=(pos:complement(21911..21913));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_000690;product=tRNA-Thr DBLQKW010000010.1 tRNAscan-SE exon 21871 21946 . - . ID=exon-ACYKK2_000690-1;Parent=rna-ACYKK2_000690;anticodon=(pos:complement(21911..21913));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_000690;product=tRNA-Thr DBLQKW010000010.1 tpg pseudogene 22038 22798 . - . ID=gene-ACYKK2_000691;Name=ACYKK2_000691;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_000691;pseudo=true DBLQKW010000010.1 Protein Homology CDS 22038 22798 . - 0 ID=cds-ACYKK2_000691;Parent=gene-ACYKK2_000691;Note=frameshifted;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343903.1;locus_tag=ACYKK2_000691;product=amino acid ABC transporter ATP-binding protein;pseudo=true;transl_table=11 DBLQKW010000010.1 tpg gene 22800 23456 . - . ID=gene-ACYKK2_000692;Name=ACYKK2_000692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000692 DBLQKW010000010.1 Protein Homology CDS 22800 23456 . - 0 ID=cds-HIH2231359.1;Parent=gene-ACYKK2_000692;Dbxref=NCBI_GP:HIH2231359.1;Name=HIH2231359.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343902.1;locus_tag=ACYKK2_000692;product=amino acid ABC transporter permease;protein_id=HIH2231359.1;transl_table=11 DBLQKW010000010.1 tpg gene 23449 24150 . - . ID=gene-ACYKK2_000693;Name=ACYKK2_000693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000693 DBLQKW010000010.1 Protein Homology CDS 23449 24150 . - 0 ID=cds-HIH2231360.1;Parent=gene-ACYKK2_000693;Dbxref=NCBI_GP:HIH2231360.1;Name=HIH2231360.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343901.1;locus_tag=ACYKK2_000693;product=amino acid ABC transporter permease;protein_id=HIH2231360.1;transl_table=11 DBLQKW010000010.1 tpg gene 24166 24762 . - . ID=gene-ACYKK2_000694;Name=nssR;gbkey=Gene;gene=nssR;gene_biotype=protein_coding;locus_tag=ACYKK2_000694 DBLQKW010000010.1 Protein Homology CDS 24166 24762 . - 0 ID=cds-HIH2231361.1;Parent=gene-ACYKK2_000694;Dbxref=NCBI_GP:HIH2231361.1;Name=HIH2231361.1;gbkey=CDS;gene=nssR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343900.1;locus_tag=ACYKK2_000694;product=nitrosative stress-sensitive transcriptional regulator NssR;protein_id=HIH2231361.1;transl_table=11 DBLQKW010000010.1 tpg gene 24857 25240 . + . ID=gene-ACYKK2_000695;Name=ctb;gbkey=Gene;gene=ctb;gene_biotype=protein_coding;locus_tag=ACYKK2_000695 DBLQKW010000010.1 Protein Homology CDS 24857 25240 . + 0 ID=cds-HIH2231362.1;Parent=gene-ACYKK2_000695;Dbxref=NCBI_GP:HIH2231362.1;Name=HIH2231362.1;gbkey=CDS;gene=ctb;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343899.1;locus_tag=ACYKK2_000695;product=truncated hemoglobin Ctb;protein_id=HIH2231362.1;transl_table=11 DBLQKW010000010.1 tpg gene 25237 27060 . - . ID=gene-ACYKK2_000696;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=ACYKK2_000696 DBLQKW010000010.1 Protein Homology CDS 25237 27060 . - 0 ID=cds-HIH2231363.1;Parent=gene-ACYKK2_000696;Dbxref=NCBI_GP:HIH2231363.1;Name=HIH2231363.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;gene=recG;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343898.1;locus_tag=ACYKK2_000696;product=ATP-dependent DNA helicase RecG;protein_id=HIH2231363.1;transl_table=11 DBLQKW010000010.1 tpg gene 27050 28270 . - . ID=gene-ACYKK2_000697;Name=ACYKK2_000697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000697 DBLQKW010000010.1 Protein Homology CDS 27050 28270 . - 0 ID=cds-HIH2231364.1;Parent=gene-ACYKK2_000697;Dbxref=NCBI_GP:HIH2231364.1;Name=HIH2231364.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343897.1;locus_tag=ACYKK2_000697;product=M16 family metallopeptidase;protein_id=HIH2231364.1;transl_table=11 DBLQKW010000010.1 tpg gene 28270 29316 . - . ID=gene-ACYKK2_000698;Name=ACYKK2_000698;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000698 DBLQKW010000010.1 Protein Homology CDS 28270 29316 . - 0 ID=cds-HIH2231365.1;Parent=gene-ACYKK2_000698;Dbxref=NCBI_GP:HIH2231365.1;Name=HIH2231365.1;Ontology_term=GO:0009234,GO:0016765,GO:0051536;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343896.1;locus_tag=ACYKK2_000698;product=dehypoxanthine futalosine cyclase;protein_id=HIH2231365.1;transl_table=11 DBLQKW010000010.1 tpg gene 29390 30577 . + . ID=gene-ACYKK2_000699;Name=ACYKK2_000699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000699 DBLQKW010000010.1 Protein Homology CDS 29390 30577 . + 0 ID=cds-HIH2231366.1;Parent=gene-ACYKK2_000699;Dbxref=NCBI_GP:HIH2231366.1;Name=HIH2231366.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343895.1;locus_tag=ACYKK2_000699;product=MFS transporter;protein_id=HIH2231366.1;transl_table=11 DBLQKW010000010.1 tpg gene 30593 31681 . - . ID=gene-ACYKK2_000700;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=ACYKK2_000700 DBLQKW010000010.1 Protein Homology CDS 30593 31681 . - 0 ID=cds-HIH2231367.1;Parent=gene-ACYKK2_000700;Dbxref=NCBI_GP:HIH2231367.1;Name=HIH2231367.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343894.1;locus_tag=ACYKK2_000700;product=transcription termination factor NusA;protein_id=HIH2231367.1;transl_table=11 DBLQKW010000010.1 tpg gene 31808 32050 . + . ID=gene-ACYKK2_000701;Name=ACYKK2_000701;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000701 DBLQKW010000010.1 Protein Homology CDS 31808 32050 . + 0 ID=cds-HIH2231368.1;Parent=gene-ACYKK2_000701;Dbxref=NCBI_GP:HIH2231368.1;Name=HIH2231368.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002851103.1;locus_tag=ACYKK2_000701;product=HP0268 family nuclease;protein_id=HIH2231368.1;transl_table=11 DBLQKW010000010.1 tpg gene 32047 33348 . + . ID=gene-ACYKK2_000702;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=ACYKK2_000702 DBLQKW010000010.1 Protein Homology CDS 32047 33348 . + 0 ID=cds-HIH2231369.1;Parent=gene-ACYKK2_000702;Dbxref=NCBI_GP:HIH2231369.1;Name=HIH2231369.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343892.1;locus_tag=ACYKK2_000702;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=HIH2231369.1;transl_table=11 DBLQKW010000010.1 tpg gene 33332 33961 . + . ID=gene-ACYKK2_000703;Name=ACYKK2_000703;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000703 DBLQKW010000010.1 Protein Homology CDS 33332 33961 . + 0 ID=cds-HIH2231370.1;Parent=gene-ACYKK2_000703;Dbxref=NCBI_GP:HIH2231370.1;Name=HIH2231370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343891.1;locus_tag=ACYKK2_000703;product=lysophospholipid acyltransferase family protein;protein_id=HIH2231370.1;transl_table=11 DBLQKW010000010.1 tpg gene 33963 34922 . + . ID=gene-ACYKK2_000704;Name=ACYKK2_000704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000704 DBLQKW010000010.1 Protein Homology CDS 33963 34922 . + 0 ID=cds-HIH2231371.1;Parent=gene-ACYKK2_000704;Dbxref=NCBI_GP:HIH2231371.1;Name=HIH2231371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343890.1;locus_tag=ACYKK2_000704;product=clan AA aspartic protease;protein_id=HIH2231371.1;transl_table=11 DBLQKW010000010.1 tpg gene 34919 35446 . + . ID=gene-ACYKK2_000705;Name=ACYKK2_000705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000705 DBLQKW010000010.1 Protein Homology CDS 34919 35446 . + 0 ID=cds-HIH2231372.1;Parent=gene-ACYKK2_000705;Dbxref=NCBI_GP:HIH2231372.1;Name=HIH2231372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014516703.1;locus_tag=ACYKK2_000705;product=hypothetical protein;protein_id=HIH2231372.1;transl_table=11 DBLQKW010000010.1 tpg gene 35436 35954 . + . ID=gene-ACYKK2_000706;Name=ACYKK2_000706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000706 DBLQKW010000010.1 Protein Homology CDS 35436 35954 . + 0 ID=cds-HIH2231373.1;Parent=gene-ACYKK2_000706;Dbxref=NCBI_GP:HIH2231373.1;Name=HIH2231373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002857565.1;locus_tag=ACYKK2_000706;product=hypothetical protein;protein_id=HIH2231373.1;transl_table=11 DBLQKW010000010.1 tpg gene 35946 37238 . - . ID=gene-ACYKK2_000707;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=ACYKK2_000707 DBLQKW010000010.1 Protein Homology CDS 35946 37238 . - 0 ID=cds-HIH2231374.1;Parent=gene-ACYKK2_000707;Dbxref=NCBI_GP:HIH2231374.1;Name=HIH2231374.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343887.1;locus_tag=ACYKK2_000707;product=phosphomethylpyrimidine synthase ThiC;protein_id=HIH2231374.1;transl_table=11 DBLQKW010000010.1 cmsearch riboswitch 37295 37399 . - . ID=id-DBLQKW010000010.1:37295..37399;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch DBLQKW010000010.1 tpg gene 37413 38183 . - . ID=gene-ACYKK2_000708;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=ACYKK2_000708 DBLQKW010000010.1 Protein Homology CDS 37413 38183 . - 0 ID=cds-HIH2231375.1;Parent=gene-ACYKK2_000708;Dbxref=NCBI_GP:HIH2231375.1;Name=HIH2231375.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020246882.1;locus_tag=ACYKK2_000708;product=3'-5' exonuclease;protein_id=HIH2231375.1;transl_table=11 DBLQKW010000010.1 tpg gene 38180 38827 . - . ID=gene-ACYKK2_000709;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=ACYKK2_000709 DBLQKW010000010.1 Protein Homology CDS 38180 38827 . - 0 ID=cds-HIH2231376.1;Parent=gene-ACYKK2_000709;Dbxref=NCBI_GP:HIH2231376.1;Name=HIH2231376.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343885.1;locus_tag=ACYKK2_000709;product=ribulose-phosphate 3-epimerase;protein_id=HIH2231376.1;transl_table=11 DBLQKW010000010.1 tpg gene 38967 39161 . + . ID=gene-ACYKK2_000710;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=ACYKK2_000710 DBLQKW010000010.1 Protein Homology CDS 38967 39161 . + 0 ID=cds-HIH2231377.1;Parent=gene-ACYKK2_000710;Dbxref=NCBI_GP:HIH2231377.1;Name=HIH2231377.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343884.1;locus_tag=ACYKK2_000710;product=50S ribosomal protein L28;protein_id=HIH2231377.1;transl_table=11 DBLQKW010000010.1 tpg gene 39346 39561 . + . ID=gene-ACYKK2_000711;Name=ACYKK2_000711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000711 DBLQKW010000010.1 Protein Homology CDS 39346 39561 . + 0 ID=cds-HIH2231378.1;Parent=gene-ACYKK2_000711;Dbxref=NCBI_GP:HIH2231378.1;Name=HIH2231378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343883.1;locus_tag=ACYKK2_000711;product=YdcH family protein;protein_id=HIH2231378.1;transl_table=11 DBLQKW010000010.1 tpg pseudogene 39982 40230 . + . ID=gene-ACYKK2_000712;Name=ACYKK2_000712;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_000712;pseudo=true DBLQKW010000010.1 Protein Homology CDS 39982 40230 . + 0 ID=cds-ACYKK2_000712;Parent=gene-ACYKK2_000712;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF012245.6;locus_tag=ACYKK2_000712;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 DBLQKW010000010.1 tpg gene 40234 40668 . + . ID=gene-ACYKK2_000713;Name=ACYKK2_000713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000713 DBLQKW010000010.1 Protein Homology CDS 40234 40668 . + 0 ID=cds-HIH2231379.1;Parent=gene-ACYKK2_000713;Dbxref=NCBI_GP:HIH2231379.1;Name=HIH2231379.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025062.6;locus_tag=ACYKK2_000713;product=CZB domain-containing protein;protein_id=HIH2231379.1;transl_table=11 DBLQKW010000010.1 tpg gene 40700 41296 . - . ID=gene-ACYKK2_000714;Name=ACYKK2_000714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000714 DBLQKW010000010.1 Protein Homology CDS 40700 41296 . - 0 ID=cds-HIH2231380.1;Parent=gene-ACYKK2_000714;Dbxref=NCBI_GP:HIH2231380.1;Name=HIH2231380.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343881.1;locus_tag=ACYKK2_000714;product=NUDIX domain-containing protein;protein_id=HIH2231380.1;transl_table=11 DBLQKW010000010.1 tpg pseudogene 41379 43452 . - . ID=gene-ACYKK2_000715;Name=ACYKK2_000715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_000715;pseudo=true DBLQKW010000010.1 Protein Homology CDS 41379 43452 . - 0 ID=cds-ACYKK2_000715;Parent=gene-ACYKK2_000715;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002933079.1;locus_tag=ACYKK2_000715;product=TonB-dependent receptor domain-containing protein;pseudo=true;transl_table=11 DBLQKW010000010.1 tpg gene 43586 44524 . - . ID=gene-ACYKK2_000716;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=ACYKK2_000716 DBLQKW010000010.1 Protein Homology CDS 43586 44524 . - 0 ID=cds-HIH2231381.1;Parent=gene-ACYKK2_000716;Dbxref=NCBI_GP:HIH2231381.1;Name=HIH2231381.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343880.1;locus_tag=ACYKK2_000716;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=HIH2231381.1;transl_table=11 DBLQKW010000010.1 tpg gene 44526 45740 . - . ID=gene-ACYKK2_000717;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=ACYKK2_000717 DBLQKW010000010.1 Protein Homology CDS 44526 45740 . - 0 ID=cds-HIH2231382.1;Parent=gene-ACYKK2_000717;Dbxref=NCBI_GP:HIH2231382.1;Name=HIH2231382.1;Ontology_term=GO:0006633,GO:0016747;gbkey=CDS;gene=fabF;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343879.1;locus_tag=ACYKK2_000717;product=beta-ketoacyl-ACP synthase II;protein_id=HIH2231382.1;transl_table=11 DBLQKW010000010.1 tpg gene 45767 46000 . - . ID=gene-ACYKK2_000718;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=ACYKK2_000718 DBLQKW010000010.1 Protein Homology CDS 45767 46000 . - 0 ID=cds-HIH2231383.1;Parent=gene-ACYKK2_000718;Dbxref=NCBI_GP:HIH2231383.1;Name=HIH2231383.1;Ontology_term=GO:0006633,GO:0000036;gbkey=CDS;gene=acpP;go_function=acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343878.1;locus_tag=ACYKK2_000718;product=acyl carrier protein;protein_id=HIH2231383.1;transl_table=11 DBLQKW010000010.1 tpg gene 46110 46778 . + . ID=gene-ACYKK2_000719;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=protein_coding;locus_tag=ACYKK2_000719 DBLQKW010000010.1 Protein Homology CDS 46110 46778 . + 0 ID=cds-HIH2231384.1;Parent=gene-ACYKK2_000719;Dbxref=NCBI_GP:HIH2231384.1;Name=HIH2231384.1;Ontology_term=GO:0006772,GO:0050334;gbkey=CDS;gene=tenA;go_function=thiaminase activity|0050334||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343877.1;locus_tag=ACYKK2_000719;product=thiaminase II;protein_id=HIH2231384.1;transl_table=11 DBLQKW010000010.1 tpg gene 46802 47659 . - . ID=gene-ACYKK2_000720;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=ACYKK2_000720 DBLQKW010000010.1 Protein Homology CDS 46802 47659 . - 0 ID=cds-HIH2231385.1;Parent=gene-ACYKK2_000720;Dbxref=NCBI_GP:HIH2231385.1;Name=HIH2231385.1;Ontology_term=GO:0016491;gbkey=CDS;gene=sdhE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343876.1;locus_tag=ACYKK2_000720;product=8-methylmenaquinol:fumarate reductase membrane anchor subunit;protein_id=HIH2231385.1;transl_table=11 DBLQKW010000010.1 tpg gene 47663 48628 . - . ID=gene-ACYKK2_000721;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=ACYKK2_000721 DBLQKW010000010.1 Protein Homology CDS 47663 48628 . - 0 ID=cds-HIH2231386.1;Parent=gene-ACYKK2_000721;Dbxref=NCBI_GP:HIH2231386.1;Name=HIH2231386.1;Ontology_term=GO:0006099,GO:0009055;gbkey=CDS;gene=sdhB;go_function=electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343875.1;locus_tag=ACYKK2_000721;product=8-methylmenaquinol:fumarate reductase iron-sulfur subunit;protein_id=HIH2231386.1;transl_table=11 DBLQKW010000010.1 tpg gene 48625 50460 . - . ID=gene-ACYKK2_000722;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=ACYKK2_000722 DBLQKW010000010.1 Protein Homology CDS 48625 50460 . - 0 ID=cds-HIH2231387.1;Parent=gene-ACYKK2_000722;Dbxref=NCBI_GP:HIH2231387.1;Name=HIH2231387.1;Ontology_term=GO:0022900,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343874.1;locus_tag=ACYKK2_000722;product=8-methylmenaquinol:fumarate reductase flavoprotein subunit;protein_id=HIH2231387.1;transl_table=11 ##sequence-region DBLQKW010000011.1 1 50030 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000011.1 tpg region 1 50030 . + . ID=DBLQKW010000011.1:1..50030;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000011.1 tpg gene 132 1538 . + . ID=gene-ACYKK2_000723;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=ACYKK2_000723 DBLQKW010000011.1 Protein Homology CDS 132 1538 . + 0 ID=cds-HIH2231388.1;Parent=gene-ACYKK2_000723;Dbxref=NCBI_GP:HIH2231388.1;Name=HIH2231388.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343547.1;locus_tag=ACYKK2_000723;product=aspartate ammonia-lyase;protein_id=HIH2231388.1;transl_table=11 DBLQKW010000011.1 tpg gene 1555 2892 . + . ID=gene-ACYKK2_000724;Name=ACYKK2_000724;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000724 DBLQKW010000011.1 Protein Homology CDS 1555 2892 . + 0 ID=cds-HIH2231389.1;Parent=gene-ACYKK2_000724;Dbxref=NCBI_GP:HIH2231389.1;Name=HIH2231389.1;Ontology_term=GO:0015740,GO:0015556,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343548.1;locus_tag=ACYKK2_000724;product=anaerobic C4-dicarboxylate transporter;protein_id=HIH2231389.1;transl_table=11 DBLQKW010000011.1 tpg gene 2998 4359 . + . ID=gene-ACYKK2_000725;Name=ACYKK2_000725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000725 DBLQKW010000011.1 Protein Homology CDS 2998 4359 . + 0 ID=cds-HIH2231390.1;Parent=gene-ACYKK2_000725;Dbxref=NCBI_GP:HIH2231390.1;Name=HIH2231390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343549.1;locus_tag=ACYKK2_000725;product=hypothetical protein;protein_id=HIH2231390.1;transl_table=11 DBLQKW010000011.1 tpg gene 4369 4764 . + . ID=gene-ACYKK2_000726;Name=ACYKK2_000726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000726 DBLQKW010000011.1 Protein Homology CDS 4369 4764 . + 0 ID=cds-HIH2231391.1;Parent=gene-ACYKK2_000726;Dbxref=NCBI_GP:HIH2231391.1;Name=HIH2231391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002859770.1;locus_tag=ACYKK2_000726;product=YcfL family protein;protein_id=HIH2231391.1;transl_table=11 DBLQKW010000011.1 tpg gene 4761 5384 . + . ID=gene-ACYKK2_000727;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=ACYKK2_000727 DBLQKW010000011.1 Protein Homology CDS 4761 5384 . + 0 ID=cds-HIH2231392.1;Parent=gene-ACYKK2_000727;Dbxref=NCBI_GP:HIH2231392.1;Name=HIH2231392.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343551.1;locus_tag=ACYKK2_000727;product=penicillin-binding protein activator LpoB;protein_id=HIH2231392.1;transl_table=11 DBLQKW010000011.1 tpg gene 5467 6804 . + . ID=gene-ACYKK2_000728;Name=ACYKK2_000728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000728 DBLQKW010000011.1 Protein Homology CDS 5467 6804 . + 0 ID=cds-HIH2231393.1;Parent=gene-ACYKK2_000728;Dbxref=NCBI_GP:HIH2231393.1;Name=HIH2231393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343552.1;locus_tag=ACYKK2_000728;product=DUF6844 domain-containing protein;protein_id=HIH2231393.1;transl_table=11 DBLQKW010000011.1 tpg gene 6814 8016 . + . ID=gene-ACYKK2_000729;Name=ACYKK2_000729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000729 DBLQKW010000011.1 Protein Homology CDS 6814 8016 . + 0 ID=cds-HIH2231394.1;Parent=gene-ACYKK2_000729;Dbxref=NCBI_GP:HIH2231394.1;Name=HIH2231394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343553.1;locus_tag=ACYKK2_000729;product=CsgG/HfaB family protein;protein_id=HIH2231394.1;transl_table=11 DBLQKW010000011.1 tpg gene 8175 8483 . + . ID=gene-ACYKK2_000730;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=ACYKK2_000730 DBLQKW010000011.1 Protein Homology CDS 8175 8483 . + 0 ID=cds-HIH2231395.1;Parent=gene-ACYKK2_000730;Dbxref=NCBI_GP:HIH2231395.1;Name=HIH2231395.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343554.1;locus_tag=ACYKK2_000730;product=50S ribosomal protein L21;protein_id=HIH2231395.1;transl_table=11 DBLQKW010000011.1 tpg gene 8494 8748 . + . ID=gene-ACYKK2_000731;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=ACYKK2_000731 DBLQKW010000011.1 Protein Homology CDS 8494 8748 . + 0 ID=cds-HIH2231396.1;Parent=gene-ACYKK2_000731;Dbxref=NCBI_GP:HIH2231396.1;Name=HIH2231396.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343555.1;locus_tag=ACYKK2_000731;product=50S ribosomal protein L27;protein_id=HIH2231396.1;transl_table=11 DBLQKW010000011.1 tpg gene 8855 9892 . + . ID=gene-ACYKK2_000732;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=ACYKK2_000732 DBLQKW010000011.1 Protein Homology CDS 8855 9892 . + 0 ID=cds-HIH2231397.1;Parent=gene-ACYKK2_000732;Dbxref=NCBI_GP:HIH2231397.1;Name=HIH2231397.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=obgE;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002872259.1;locus_tag=ACYKK2_000732;product=GTPase ObgE;protein_id=HIH2231397.1;transl_table=11 DBLQKW010000011.1 tpg gene 10015 10770 . + . ID=gene-ACYKK2_000733;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=ACYKK2_000733 DBLQKW010000011.1 Protein Homology CDS 10015 10770 . + 0 ID=cds-HIH2231398.1;Parent=gene-ACYKK2_000733;Dbxref=NCBI_GP:HIH2231398.1;Name=HIH2231398.1;Ontology_term=GO:0006561,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343557.1;locus_tag=ACYKK2_000733;product=glutamate 5-kinase;protein_id=HIH2231398.1;transl_table=11 DBLQKW010000011.1 tpg gene 10844 11761 . + . ID=gene-ACYKK2_000734;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=ACYKK2_000734 DBLQKW010000011.1 Protein Homology CDS 10844 11761 . + 0 ID=cds-HIH2231399.1;Parent=gene-ACYKK2_000734;Dbxref=NCBI_GP:HIH2231399.1;Name=HIH2231399.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343558.1;locus_tag=ACYKK2_000734;product=methionyl-tRNA formyltransferase;protein_id=HIH2231399.1;transl_table=11 DBLQKW010000011.1 tpg gene 11724 12377 . + . ID=gene-ACYKK2_000735;Name=ACYKK2_000735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000735 DBLQKW010000011.1 Protein Homology CDS 11724 12377 . + 0 ID=cds-HIH2231400.1;Parent=gene-ACYKK2_000735;Dbxref=NCBI_GP:HIH2231400.1;Name=HIH2231400.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343559.1;locus_tag=ACYKK2_000735;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=HIH2231400.1;transl_table=11 DBLQKW010000011.1 tpg gene 12374 13159 . + . ID=gene-ACYKK2_000736;Name=ACYKK2_000736;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000736 DBLQKW010000011.1 Protein Homology CDS 12374 13159 . + 0 ID=cds-HIH2231401.1;Parent=gene-ACYKK2_000736;Dbxref=NCBI_GP:HIH2231401.1;Name=HIH2231401.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004278029.1;locus_tag=ACYKK2_000736;product=ParA family protein;protein_id=HIH2231401.1;transl_table=11 DBLQKW010000011.1 tpg gene 13165 14001 . + . ID=gene-ACYKK2_000737;Name=ACYKK2_000737;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000737 DBLQKW010000011.1 Protein Homology CDS 13165 14001 . + 0 ID=cds-HIH2231402.1;Parent=gene-ACYKK2_000737;Dbxref=NCBI_GP:HIH2231402.1;Name=HIH2231402.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812158.1;locus_tag=ACYKK2_000737;product=ParB/RepB/Spo0J family partition protein;protein_id=HIH2231402.1;transl_table=11 DBLQKW010000011.1 tpg gene 14062 14487 . + . ID=gene-ACYKK2_000738;Name=ACYKK2_000738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000738 DBLQKW010000011.1 Protein Homology CDS 14062 14487 . + 0 ID=cds-HIH2231403.1;Parent=gene-ACYKK2_000738;Dbxref=NCBI_GP:HIH2231403.1;Name=HIH2231403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343562.1;locus_tag=ACYKK2_000738;product=FoF1 ATP synthase subunit B';protein_id=HIH2231403.1;transl_table=11 DBLQKW010000011.1 tpg gene 14498 15010 . + . ID=gene-ACYKK2_000739;Name=ACYKK2_000739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000739 DBLQKW010000011.1 Protein Homology CDS 14498 15010 . + 0 ID=cds-HIH2231404.1;Parent=gene-ACYKK2_000739;Dbxref=NCBI_GP:HIH2231404.1;Name=HIH2231404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343563.1;locus_tag=ACYKK2_000739;product=F0F1 ATP synthase subunit B;protein_id=HIH2231404.1;transl_table=11 DBLQKW010000011.1 tpg gene 15013 15534 . + . ID=gene-ACYKK2_000740;Name=ACYKK2_000740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000740 DBLQKW010000011.1 Protein Homology CDS 15013 15534 . + 0 ID=cds-HIH2231405.1;Parent=gene-ACYKK2_000740;Dbxref=NCBI_GP:HIH2231405.1;Name=HIH2231405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343564.1;locus_tag=ACYKK2_000740;product=F0F1 ATP synthase subunit delta;protein_id=HIH2231405.1;transl_table=11 DBLQKW010000011.1 tpg gene 15548 17053 . + . ID=gene-ACYKK2_000741;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=ACYKK2_000741 DBLQKW010000011.1 Protein Homology CDS 15548 17053 . + 0 ID=cds-HIH2231406.1;Parent=gene-ACYKK2_000741;Dbxref=NCBI_GP:HIH2231406.1;Name=HIH2231406.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343565.1;locus_tag=ACYKK2_000741;product=F0F1 ATP synthase subunit alpha;protein_id=HIH2231406.1;transl_table=11 DBLQKW010000011.1 tpg gene 17062 17946 . + . ID=gene-ACYKK2_000742;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=ACYKK2_000742 DBLQKW010000011.1 Protein Homology CDS 17062 17946 . + 0 ID=cds-HIH2231407.1;Parent=gene-ACYKK2_000742;Dbxref=NCBI_GP:HIH2231407.1;Name=HIH2231407.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343566.1;locus_tag=ACYKK2_000742;product=ATP synthase F1 subunit gamma;protein_id=HIH2231407.1;transl_table=11 DBLQKW010000011.1 tpg gene 17972 19369 . + . ID=gene-ACYKK2_000743;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=ACYKK2_000743 DBLQKW010000011.1 Protein Homology CDS 17972 19369 . + 0 ID=cds-HIH2231408.1;Parent=gene-ACYKK2_000743;Dbxref=NCBI_GP:HIH2231408.1;Name=HIH2231408.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343567.1;locus_tag=ACYKK2_000743;product=F0F1 ATP synthase subunit beta;protein_id=HIH2231408.1;transl_table=11 DBLQKW010000011.1 tpg gene 19373 19762 . + . ID=gene-ACYKK2_000744;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=ACYKK2_000744 DBLQKW010000011.1 Protein Homology CDS 19373 19762 . + 0 ID=cds-HIH2231409.1;Parent=gene-ACYKK2_000744;Dbxref=NCBI_GP:HIH2231409.1;Name=HIH2231409.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpC;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343568.1;locus_tag=ACYKK2_000744;product=ATP synthase F1 subunit epsilon;protein_id=HIH2231409.1;transl_table=11 DBLQKW010000011.1 tpg gene 19762 20316 . + . ID=gene-ACYKK2_000745;Name=ACYKK2_000745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000745 DBLQKW010000011.1 Protein Homology CDS 19762 20316 . + 0 ID=cds-HIH2231410.1;Parent=gene-ACYKK2_000745;Dbxref=NCBI_GP:HIH2231410.1;Name=HIH2231410.1;Ontology_term=GO:0015031,GO:0015252,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=proton channel activity|0015252||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343569.1;locus_tag=ACYKK2_000745;product=MotA/TolQ/ExbB proton channel family protein;protein_id=HIH2231410.1;transl_table=11 DBLQKW010000011.1 tpg gene 20325 20714 . + . ID=gene-ACYKK2_000746;Name=ACYKK2_000746;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000746 DBLQKW010000011.1 Protein Homology CDS 20325 20714 . + 0 ID=cds-HIH2231411.1;Parent=gene-ACYKK2_000746;Dbxref=NCBI_GP:HIH2231411.1;Name=HIH2231411.1;Ontology_term=GO:0015031,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343570.1;locus_tag=ACYKK2_000746;product=ExbD/TolR family protein;protein_id=HIH2231411.1;transl_table=11 DBLQKW010000011.1 tpg gene 20717 21496 . + . ID=gene-ACYKK2_000747;Name=ACYKK2_000747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000747 DBLQKW010000011.1 Protein Homology CDS 20717 21496 . + 0 ID=cds-HIH2231412.1;Parent=gene-ACYKK2_000747;Dbxref=NCBI_GP:HIH2231412.1;Name=HIH2231412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343571.1;locus_tag=ACYKK2_000747;product=TonB C-terminal domain-containing protein;protein_id=HIH2231412.1;transl_table=11 DBLQKW010000011.1 tpg gene 21506 22714 . + . ID=gene-ACYKK2_000748;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=ACYKK2_000748 DBLQKW010000011.1 Protein Homology CDS 21506 22714 . + 0 ID=cds-HIH2231413.1;Parent=gene-ACYKK2_000748;Dbxref=NCBI_GP:HIH2231413.1;Name=HIH2231413.1;gbkey=CDS;gene=tolB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343572.1;locus_tag=ACYKK2_000748;product=Tol-Pal system protein TolB;protein_id=HIH2231413.1;transl_table=11 DBLQKW010000011.1 tpg gene 22791 23288 . + . ID=gene-ACYKK2_000749;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=ACYKK2_000749 DBLQKW010000011.1 Protein Homology CDS 22791 23288 . + 0 ID=cds-HIH2231414.1;Parent=gene-ACYKK2_000749;Dbxref=NCBI_GP:HIH2231414.1;Name=HIH2231414.1;Ontology_term=GO:0009279;gbkey=CDS;gene=pal;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343573.1;locus_tag=ACYKK2_000749;product=peptidoglycan-associated lipoprotein Pal;protein_id=HIH2231414.1;transl_table=11 DBLQKW010000011.1 tpg gene 23292 24239 . + . ID=gene-ACYKK2_000750;Name=ACYKK2_000750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000750 DBLQKW010000011.1 Protein Homology CDS 23292 24239 . + 0 ID=cds-HIH2231415.1;Parent=gene-ACYKK2_000750;Dbxref=NCBI_GP:HIH2231415.1;Name=HIH2231415.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343574.1;locus_tag=ACYKK2_000750;product=tetratricopeptide repeat protein;protein_id=HIH2231415.1;transl_table=11 DBLQKW010000011.1 tpg gene 24254 24823 . + . ID=gene-ACYKK2_000751;Name=ACYKK2_000751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000751 DBLQKW010000011.1 Protein Homology CDS 24254 24823 . + 0 ID=cds-HIH2231416.1;Parent=gene-ACYKK2_000751;Dbxref=NCBI_GP:HIH2231416.1;Name=HIH2231416.1;Ontology_term=GO:0006457,GO:0003755,GO:0046872;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,metal ion binding|0046872||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343575.1;locus_tag=ACYKK2_000751;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=HIH2231416.1;transl_table=11 DBLQKW010000011.1 tpg gene 24871 25743 . + . ID=gene-ACYKK2_000752;Name=ACYKK2_000752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000752 DBLQKW010000011.1 Protein Homology CDS 24871 25743 . + 0 ID=cds-HIH2231417.1;Parent=gene-ACYKK2_000752;Dbxref=NCBI_GP:HIH2231417.1;Name=HIH2231417.1;Ontology_term=GO:0006633,GO:0004314,GO:0016740;gbkey=CDS;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA,transferase activity|0016740||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343576.1;locus_tag=ACYKK2_000752;product=ACP S-malonyltransferase;protein_id=HIH2231417.1;transl_table=11 DBLQKW010000011.1 tpg gene 25740 26429 . + . ID=gene-ACYKK2_000753;Name=pfs;gbkey=Gene;gene=pfs;gene_biotype=protein_coding;locus_tag=ACYKK2_000753 DBLQKW010000011.1 Protein Homology CDS 25740 26429 . + 0 ID=cds-HIH2231418.1;Parent=gene-ACYKK2_000753;Dbxref=NCBI_GP:HIH2231418.1;Name=HIH2231418.1;gbkey=CDS;gene=pfs;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343577.1;locus_tag=ACYKK2_000753;product=aminodeoxyfutalosine nucleosidase;protein_id=HIH2231418.1;transl_table=11 DBLQKW010000011.1 tpg gene 26426 27187 . + . ID=gene-ACYKK2_000754;Name=ACYKK2_000754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000754 DBLQKW010000011.1 Protein Homology CDS 26426 27187 . + 0 ID=cds-HIH2231419.1;Parent=gene-ACYKK2_000754;Dbxref=NCBI_GP:HIH2231419.1;Name=HIH2231419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842688.1;locus_tag=ACYKK2_000754;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=HIH2231419.1;transl_table=11 DBLQKW010000011.1 tpg gene 27184 27705 . + . ID=gene-ACYKK2_000755;Name=ACYKK2_000755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000755 DBLQKW010000011.1 Protein Homology CDS 27184 27705 . + 0 ID=cds-HIH2231420.1;Parent=gene-ACYKK2_000755;Dbxref=NCBI_GP:HIH2231420.1;Name=HIH2231420.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343579.1;locus_tag=ACYKK2_000755;product=isochorismatase family cysteine hydrolase;protein_id=HIH2231420.1;transl_table=11 DBLQKW010000011.1 tpg gene 27705 28319 . + . ID=gene-ACYKK2_000756;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=ACYKK2_000756 DBLQKW010000011.1 Protein Homology CDS 27705 28319 . + 0 ID=cds-HIH2231421.1;Parent=gene-ACYKK2_000756;Dbxref=NCBI_GP:HIH2231421.1;Name=HIH2231421.1;gbkey=CDS;gene=recO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343580.1;locus_tag=ACYKK2_000756;product=recombination protein RecO;protein_id=HIH2231421.1;transl_table=11 DBLQKW010000011.1 tpg gene 28316 28723 . + . ID=gene-ACYKK2_000757;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=ACYKK2_000757 DBLQKW010000011.1 Protein Homology CDS 28316 28723 . + 0 ID=cds-HIH2231422.1;Parent=gene-ACYKK2_000757;Dbxref=NCBI_GP:HIH2231422.1;Name=HIH2231422.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343581.1;locus_tag=ACYKK2_000757;product=rRNA maturation RNase YbeY;protein_id=HIH2231422.1;transl_table=11 DBLQKW010000011.1 tpg gene 28847 29536 . + . ID=gene-ACYKK2_000758;Name=ACYKK2_000758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000758 DBLQKW010000011.1 Protein Homology CDS 28847 29536 . + 0 ID=cds-HIH2231423.1;Parent=gene-ACYKK2_000758;Dbxref=NCBI_GP:HIH2231423.1;Name=HIH2231423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343582.1;locus_tag=ACYKK2_000758;product=hypothetical protein;protein_id=HIH2231423.1;transl_table=11 DBLQKW010000011.1 tpg gene 29560 30486 . - . ID=gene-ACYKK2_000759;Name=ACYKK2_000759;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000759 DBLQKW010000011.1 Protein Homology CDS 29560 30486 . - 0 ID=cds-HIH2231424.1;Parent=gene-ACYKK2_000759;Dbxref=NCBI_GP:HIH2231424.1;Name=HIH2231424.1;Ontology_term=GO:0008033,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002873666.1;locus_tag=ACYKK2_000759;product=tRNA dihydrouridine synthase;protein_id=HIH2231424.1;transl_table=11 DBLQKW010000011.1 tpg gene 30483 31469 . - . ID=gene-ACYKK2_000760;Name=ACYKK2_000760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000760 DBLQKW010000011.1 Protein Homology CDS 30483 31469 . - 0 ID=cds-HIH2231425.1;Parent=gene-ACYKK2_000760;Dbxref=NCBI_GP:HIH2231425.1;Name=HIH2231425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343584.1;locus_tag=ACYKK2_000760;product=hypothetical protein;protein_id=HIH2231425.1;transl_table=11 DBLQKW010000011.1 tpg gene 31459 31821 . - . ID=gene-ACYKK2_000761;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=ACYKK2_000761 DBLQKW010000011.1 Protein Homology CDS 31459 31821 . - 0 ID=cds-HIH2231426.1;Parent=gene-ACYKK2_000761;Dbxref=NCBI_GP:HIH2231426.1;Name=HIH2231426.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343585.1;locus_tag=ACYKK2_000761;product=molecular chaperone DnaK suppressor DksA;protein_id=HIH2231426.1;transl_table=11 DBLQKW010000011.1 tpg gene 31833 32282 . - . ID=gene-ACYKK2_000762;Name=ACYKK2_000762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000762 DBLQKW010000011.1 Protein Homology CDS 31833 32282 . - 0 ID=cds-HIH2231427.1;Parent=gene-ACYKK2_000762;Dbxref=NCBI_GP:HIH2231427.1;Name=HIH2231427.1;Ontology_term=GO:0032259,GO:0003723,GO:0070038,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (pseudouridine-N3-)-methyltransferase activity|0070038||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002857335.1;locus_tag=ACYKK2_000762;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=HIH2231427.1;transl_table=11 DBLQKW010000011.1 tpg gene 32284 33126 . - . ID=gene-ACYKK2_000763;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=ACYKK2_000763 DBLQKW010000011.1 Protein Homology CDS 32284 33126 . - 0 ID=cds-HIH2231428.1;Parent=gene-ACYKK2_000763;Dbxref=NCBI_GP:HIH2231428.1;Name=HIH2231428.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343587.1;locus_tag=ACYKK2_000763;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=HIH2231428.1;transl_table=11 DBLQKW010000011.1 tpg gene 33135 33857 . - . ID=gene-ACYKK2_000764;Name=ACYKK2_000764;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000764 DBLQKW010000011.1 Protein Homology CDS 33135 33857 . - 0 ID=cds-HIH2231429.1;Parent=gene-ACYKK2_000764;Dbxref=NCBI_GP:HIH2231429.1;Name=HIH2231429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343588.1;locus_tag=ACYKK2_000764;product=inositol monophosphatase family protein;protein_id=HIH2231429.1;transl_table=11 DBLQKW010000011.1 tpg gene 33857 36076 . - . ID=gene-ACYKK2_000765;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=ACYKK2_000765 DBLQKW010000011.1 Protein Homology CDS 33857 36076 . - 0 ID=cds-HIH2231430.1;Parent=gene-ACYKK2_000765;Dbxref=NCBI_GP:HIH2231430.1;Name=HIH2231430.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343589.1;locus_tag=ACYKK2_000765;product=outer membrane protein assembly factor BamA;protein_id=HIH2231430.1;transl_table=11 DBLQKW010000011.1 tpg gene 36153 36980 . + . ID=gene-ACYKK2_000766;Name=ACYKK2_000766;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000766 DBLQKW010000011.1 Protein Homology CDS 36153 36980 . + 0 ID=cds-HIH2231431.1;Parent=gene-ACYKK2_000766;Dbxref=NCBI_GP:HIH2231431.1;Name=HIH2231431.1;Ontology_term=GO:0006571,GO:0004665,GO:0008977;gbkey=CDS;go_function=prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343590.1;locus_tag=ACYKK2_000766;product=prephenate dehydrogenase;protein_id=HIH2231431.1;transl_table=11 DBLQKW010000011.1 tpg gene 37060 38433 . + . ID=gene-ACYKK2_000767;Name=ACYKK2_000767;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000767 DBLQKW010000011.1 Protein Homology CDS 37060 38433 . + 0 ID=cds-HIH2231432.1;Parent=gene-ACYKK2_000767;Dbxref=NCBI_GP:HIH2231432.1;Name=HIH2231432.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343591.1;locus_tag=ACYKK2_000767;product=M23 family metallopeptidase;protein_id=HIH2231432.1;transl_table=11 DBLQKW010000011.1 tpg gene 38433 39317 . + . ID=gene-ACYKK2_000768;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=ACYKK2_000768 DBLQKW010000011.1 Protein Homology CDS 38433 39317 . + 0 ID=cds-HIH2231433.1;Parent=gene-ACYKK2_000768;Dbxref=NCBI_GP:HIH2231433.1;Name=HIH2231433.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343592.1;locus_tag=ACYKK2_000768;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=HIH2231433.1;transl_table=11 DBLQKW010000011.1 tpg gene 39356 39757 . + . ID=gene-ACYKK2_000769;Name=ACYKK2_000769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000769 DBLQKW010000011.1 Protein Homology CDS 39356 39757 . + 0 ID=cds-HIH2231434.1;Parent=gene-ACYKK2_000769;Dbxref=NCBI_GP:HIH2231434.1;Name=HIH2231434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343593.1;locus_tag=ACYKK2_000769;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaB;protein_id=HIH2231434.1;transl_table=11 DBLQKW010000011.1 tpg gene 39766 40644 . + . ID=gene-ACYKK2_000770;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=ACYKK2_000770 DBLQKW010000011.1 Protein Homology CDS 39766 40644 . + 0 ID=cds-HIH2231435.1;Parent=gene-ACYKK2_000770;Dbxref=NCBI_GP:HIH2231435.1;Name=HIH2231435.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343594.1;locus_tag=ACYKK2_000770;product=homoserine kinase;protein_id=HIH2231435.1;transl_table=11 DBLQKW010000011.1 tpg gene 40669 40926 . + . ID=gene-ACYKK2_000771;Name=ACYKK2_000771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000771 DBLQKW010000011.1 Protein Homology CDS 40669 40926 . + 0 ID=cds-HIH2231436.1;Parent=gene-ACYKK2_000771;Dbxref=NCBI_GP:HIH2231436.1;Name=HIH2231436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343595.1;locus_tag=ACYKK2_000771;product=DUF448 domain-containing protein;protein_id=HIH2231436.1;transl_table=11 DBLQKW010000011.1 tpg gene 40913 43528 . + . ID=gene-ACYKK2_000772;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=ACYKK2_000772 DBLQKW010000011.1 Protein Homology CDS 40913 43528 . + 0 ID=cds-HIH2231437.1;Parent=gene-ACYKK2_000772;Dbxref=NCBI_GP:HIH2231437.1;Name=HIH2231437.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343596.1;locus_tag=ACYKK2_000772;product=translation initiation factor IF-2;protein_id=HIH2231437.1;transl_table=11 DBLQKW010000011.1 tpg gene 43525 43887 . + . ID=gene-ACYKK2_000773;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=ACYKK2_000773 DBLQKW010000011.1 Protein Homology CDS 43525 43887 . + 0 ID=cds-HIH2231438.1;Parent=gene-ACYKK2_000773;Dbxref=NCBI_GP:HIH2231438.1;Name=HIH2231438.1;gbkey=CDS;gene=rbfA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343597.1;locus_tag=ACYKK2_000773;product=30S ribosome-binding factor RbfA;protein_id=HIH2231438.1;transl_table=11 DBLQKW010000011.1 tpg gene 43877 44299 . + . ID=gene-ACYKK2_000774;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=ACYKK2_000774 DBLQKW010000011.1 Protein Homology CDS 43877 44299 . + 0 ID=cds-HIH2231439.1;Parent=gene-ACYKK2_000774;Dbxref=NCBI_GP:HIH2231439.1;Name=HIH2231439.1;gbkey=CDS;gene=rimP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343598.1;locus_tag=ACYKK2_000774;product=ribosome maturation factor RimP;protein_id=HIH2231439.1;transl_table=11 DBLQKW010000011.1 tpg gene 44356 46128 . + . ID=gene-ACYKK2_000775;Name=ACYKK2_000775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000775 DBLQKW010000011.1 Protein Homology CDS 44356 46128 . + 0 ID=cds-HIH2231440.1;Parent=gene-ACYKK2_000775;Dbxref=NCBI_GP:HIH2231440.1;Name=HIH2231440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002921988.1;locus_tag=ACYKK2_000775;product=McrB family protein;protein_id=HIH2231440.1;transl_table=11 DBLQKW010000011.1 tpg gene 46125 47456 . + . ID=gene-ACYKK2_000776;Name=ACYKK2_000776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000776 DBLQKW010000011.1 Protein Homology CDS 46125 47456 . + 0 ID=cds-HIH2231441.1;Parent=gene-ACYKK2_000776;Dbxref=NCBI_GP:HIH2231441.1;Name=HIH2231441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343600.1;locus_tag=ACYKK2_000776;product=McrC family protein;protein_id=HIH2231441.1;transl_table=11 DBLQKW010000011.1 tpg gene 47445 48248 . - . ID=gene-ACYKK2_000777;Name=ACYKK2_000777;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000777 DBLQKW010000011.1 Protein Homology CDS 47445 48248 . - 0 ID=cds-HIH2231442.1;Parent=gene-ACYKK2_000777;Dbxref=NCBI_GP:HIH2231442.1;Name=HIH2231442.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343601.1;locus_tag=ACYKK2_000777;product=metal ABC transporter permease;protein_id=HIH2231442.1;transl_table=11 DBLQKW010000011.1 tpg gene 48241 49095 . - . ID=gene-ACYKK2_000778;Name=ACYKK2_000778;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000778 DBLQKW010000011.1 Protein Homology CDS 48241 49095 . - 0 ID=cds-HIH2231443.1;Parent=gene-ACYKK2_000778;Dbxref=NCBI_GP:HIH2231443.1;Name=HIH2231443.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343602.1;locus_tag=ACYKK2_000778;product=ABC transporter ATP-binding protein;protein_id=HIH2231443.1;transl_table=11 DBLQKW010000011.1 tpg gene 49108 49998 . - . ID=gene-ACYKK2_000779;Name=ACYKK2_000779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000779 DBLQKW010000011.1 Protein Homology CDS 49108 49998 . - 0 ID=cds-HIH2231444.1;Parent=gene-ACYKK2_000779;Dbxref=NCBI_GP:HIH2231444.1;Name=HIH2231444.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343603.1;locus_tag=ACYKK2_000779;product=metal ABC transporter solute-binding protein%2C Zn/Mn family;protein_id=HIH2231444.1;transl_table=11 ##sequence-region DBLQKW010000012.1 1 46640 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000012.1 tpg region 1 46640 . + . ID=DBLQKW010000012.1:1..46640;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000012.1 tpg gene 42 2411 . - . ID=gene-ACYKK2_000780;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=ACYKK2_000780 DBLQKW010000012.1 Protein Homology CDS 42 2411 . - 0 ID=cds-HIH2231445.1;Parent=gene-ACYKK2_000780;Dbxref=NCBI_GP:HIH2231445.1;Name=HIH2231445.1;gbkey=CDS;gene=pflA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344934.1;locus_tag=ACYKK2_000780;product=DUF7494 domain-containing protein;protein_id=HIH2231445.1;transl_table=11 DBLQKW010000012.1 tpg gene 2433 3821 . - . ID=gene-ACYKK2_000781;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=ACYKK2_000781 DBLQKW010000012.1 Protein Homology CDS 2433 3821 . - 0 ID=cds-HIH2231446.1;Parent=gene-ACYKK2_000781;Dbxref=NCBI_GP:HIH2231446.1;Name=HIH2231446.1;Ontology_term=GO:0008137,GO:0016655,GO:0048038,GO:0050136,GO:0016020;gbkey=CDS;gene=nuoN;go_component=membrane|0016020||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344935.1;locus_tag=ACYKK2_000781;product=NADH-quinone oxidoreductase subunit N;protein_id=HIH2231446.1;transl_table=11 DBLQKW010000012.1 tpg gene 3811 5298 . - . ID=gene-ACYKK2_000782;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=ACYKK2_000782 DBLQKW010000012.1 Protein Homology CDS 3811 5298 . - 0 ID=cds-HIH2231447.1;Parent=gene-ACYKK2_000782;Dbxref=NCBI_GP:HIH2231447.1;Name=HIH2231447.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344936.1;locus_tag=ACYKK2_000782;product=NADH-quinone oxidoreductase subunit M;protein_id=HIH2231447.1;transl_table=11 DBLQKW010000012.1 tpg gene 5300 7090 . - . ID=gene-ACYKK2_000783;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=ACYKK2_000783 DBLQKW010000012.1 Protein Homology CDS 5300 7090 . - 0 ID=cds-HIH2231448.1;Parent=gene-ACYKK2_000783;Dbxref=NCBI_GP:HIH2231448.1;Name=HIH2231448.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344937.1;locus_tag=ACYKK2_000783;product=NADH-quinone oxidoreductase subunit L;protein_id=HIH2231448.1;transl_table=11 DBLQKW010000012.1 tpg gene 7092 7388 . - . ID=gene-ACYKK2_000784;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=ACYKK2_000784 DBLQKW010000012.1 Protein Homology CDS 7092 7388 . - 0 ID=cds-HIH2231449.1;Parent=gene-ACYKK2_000784;Dbxref=NCBI_GP:HIH2231449.1;Name=HIH2231449.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344938.1;locus_tag=ACYKK2_000784;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=HIH2231449.1;transl_table=11 DBLQKW010000012.1 tpg gene 7385 7903 . - . ID=gene-ACYKK2_000785;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=ACYKK2_000785 DBLQKW010000012.1 Protein Homology CDS 7385 7903 . - 0 ID=cds-HIH2231450.1;Parent=gene-ACYKK2_000785;Dbxref=NCBI_GP:HIH2231450.1;Name=HIH2231450.1;gbkey=CDS;gene=nuoJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344939.1;locus_tag=ACYKK2_000785;product=NADH-quinone oxidoreductase subunit J;protein_id=HIH2231450.1;transl_table=11 DBLQKW010000012.1 tpg gene 7900 8541 . - . ID=gene-ACYKK2_000786;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=ACYKK2_000786 DBLQKW010000012.1 Protein Homology CDS 7900 8541 . - 0 ID=cds-HIH2231451.1;Parent=gene-ACYKK2_000786;Dbxref=NCBI_GP:HIH2231451.1;Name=HIH2231451.1;gbkey=CDS;gene=nuoI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344940.1;locus_tag=ACYKK2_000786;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=HIH2231451.1;transl_table=11 DBLQKW010000012.1 tpg gene 8551 9549 . - . ID=gene-ACYKK2_000787;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=ACYKK2_000787 DBLQKW010000012.1 Protein Homology CDS 8551 9549 . - 0 ID=cds-HIH2231452.1;Parent=gene-ACYKK2_000787;Dbxref=NCBI_GP:HIH2231452.1;Name=HIH2231452.1;Ontology_term=GO:0016020;gbkey=CDS;gene=nuoH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344941.1;locus_tag=ACYKK2_000787;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=HIH2231452.1;transl_table=11 DBLQKW010000012.1 tpg gene 9542 12004 . - . ID=gene-ACYKK2_000788;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=ACYKK2_000788 DBLQKW010000012.1 Protein Homology CDS 9542 12004 . - 0 ID=cds-HIH2231453.1;Parent=gene-ACYKK2_000788;Dbxref=NCBI_GP:HIH2231453.1;Name=HIH2231453.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=nuoG;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344942.1;locus_tag=ACYKK2_000788;product=NADH-quinone oxidoreductase subunit G;protein_id=HIH2231453.1;transl_table=11 DBLQKW010000012.1 tpg gene 12001 12693 . - . ID=gene-ACYKK2_000789;Name=ACYKK2_000789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000789 DBLQKW010000012.1 Protein Homology CDS 12001 12693 . - 0 ID=cds-HIH2231454.1;Parent=gene-ACYKK2_000789;Dbxref=NCBI_GP:HIH2231454.1;Name=HIH2231454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344943.1;locus_tag=ACYKK2_000789;product=hypothetical protein;protein_id=HIH2231454.1;transl_table=11 DBLQKW010000012.1 tpg gene 12690 12917 . - . ID=gene-ACYKK2_000790;Name=ACYKK2_000790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000790 DBLQKW010000012.1 Protein Homology CDS 12690 12917 . - 0 ID=cds-HIH2231455.1;Parent=gene-ACYKK2_000790;Dbxref=NCBI_GP:HIH2231455.1;Name=HIH2231455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344944.1;locus_tag=ACYKK2_000790;product=NADH-ubiquinone oxidoreductase subunit E family protein;protein_id=HIH2231455.1;transl_table=11 DBLQKW010000012.1 tpg gene 12914 14140 . - . ID=gene-ACYKK2_000791;Name=nuoD;gbkey=Gene;gene=nuoD;gene_biotype=protein_coding;locus_tag=ACYKK2_000791 DBLQKW010000012.1 Protein Homology CDS 12914 14140 . - 0 ID=cds-HIH2231456.1;Parent=gene-ACYKK2_000791;Dbxref=NCBI_GP:HIH2231456.1;Name=HIH2231456.1;Ontology_term=GO:0050136;gbkey=CDS;gene=nuoD;go_function=NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344945.1;locus_tag=ACYKK2_000791;product=NADH dehydrogenase (quinone) subunit D;protein_id=HIH2231456.1;transl_table=11 DBLQKW010000012.1 tpg gene 14142 14936 . - . ID=gene-ACYKK2_000792;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=ACYKK2_000792 DBLQKW010000012.1 Protein Homology CDS 14142 14936 . - 0 ID=cds-HIH2231457.1;Parent=gene-ACYKK2_000792;Dbxref=NCBI_GP:HIH2231457.1;Name=HIH2231457.1;gbkey=CDS;gene=nuoC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344946.1;locus_tag=ACYKK2_000792;product=NADH-quinone oxidoreductase subunit C;protein_id=HIH2231457.1;transl_table=11 DBLQKW010000012.1 tpg gene 14933 15436 . - . ID=gene-ACYKK2_000793;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=ACYKK2_000793 DBLQKW010000012.1 Protein Homology CDS 14933 15436 . - 0 ID=cds-HIH2231458.1;Parent=gene-ACYKK2_000793;Dbxref=NCBI_GP:HIH2231458.1;Name=HIH2231458.1;Ontology_term=GO:0008137,GO:0016655,GO:0048038,GO:0051539,GO:0005886,GO:0045271;gbkey=CDS;gene=nuoB;go_component=plasma membrane|0005886||IEA,respiratory chain complex I|0045271||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344947.1;locus_tag=ACYKK2_000793;product=NuoB/complex I 20 kDa subunit family protein;protein_id=HIH2231458.1;transl_table=11 DBLQKW010000012.1 tpg gene 15418 15807 . - . ID=gene-ACYKK2_000794;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=ACYKK2_000794 DBLQKW010000012.1 Protein Homology CDS 15418 15807 . - 0 ID=cds-HIH2231459.1;Parent=gene-ACYKK2_000794;Dbxref=NCBI_GP:HIH2231459.1;Name=HIH2231459.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344948.1;locus_tag=ACYKK2_000794;product=NAD(P)H-quinone oxidoreductase subunit 3;protein_id=HIH2231459.1;transl_table=11 DBLQKW010000012.1 tpg gene 15920 16585 . - . ID=gene-ACYKK2_000795;Name=ACYKK2_000795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000795 DBLQKW010000012.1 Protein Homology CDS 15920 16585 . - 0 ID=cds-HIH2231460.1;Parent=gene-ACYKK2_000795;Dbxref=NCBI_GP:HIH2231460.1;Name=HIH2231460.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344949.1;locus_tag=ACYKK2_000795;product=ATP-binding cassette domain-containing protein;protein_id=HIH2231460.1;transl_table=11 DBLQKW010000012.1 tpg gene 16578 17288 . - . ID=gene-ACYKK2_000796;Name=ACYKK2_000796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000796 DBLQKW010000012.1 Protein Homology CDS 16578 17288 . - 0 ID=cds-HIH2231461.1;Parent=gene-ACYKK2_000796;Dbxref=NCBI_GP:HIH2231461.1;Name=HIH2231461.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344950.1;locus_tag=ACYKK2_000796;product=ATP-binding cassette domain-containing protein;protein_id=HIH2231461.1;transl_table=11 DBLQKW010000012.1 tpg gene 17285 18079 . - . ID=gene-ACYKK2_000797;Name=ACYKK2_000797;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000797 DBLQKW010000012.1 Protein Homology CDS 17285 18079 . - 0 ID=cds-HIH2231462.1;Parent=gene-ACYKK2_000797;Dbxref=NCBI_GP:HIH2231462.1;Name=HIH2231462.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344951.1;locus_tag=ACYKK2_000797;product=ABC transporter permease;protein_id=HIH2231462.1;transl_table=11 DBLQKW010000012.1 tpg gene 18066 19010 . - . ID=gene-ACYKK2_000798;Name=ACYKK2_000798;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000798 DBLQKW010000012.1 Protein Homology CDS 18066 19010 . - 0 ID=cds-HIH2231463.1;Parent=gene-ACYKK2_000798;Dbxref=NCBI_GP:HIH2231463.1;Name=HIH2231463.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344952.1;locus_tag=ACYKK2_000798;product=ABC transporter permease;protein_id=HIH2231463.1;transl_table=11 DBLQKW010000012.1 tpg gene 19010 20545 . - . ID=gene-ACYKK2_000799;Name=ACYKK2_000799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000799 DBLQKW010000012.1 Protein Homology CDS 19010 20545 . - 0 ID=cds-HIH2231464.1;Parent=gene-ACYKK2_000799;Dbxref=NCBI_GP:HIH2231464.1;Name=HIH2231464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344953.1;locus_tag=ACYKK2_000799;product=ABC transporter substrate-binding protein;protein_id=HIH2231464.1;transl_table=11 DBLQKW010000012.1 tpg gene 20655 23426 . - . ID=gene-ACYKK2_000800;Name=ACYKK2_000800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000800 DBLQKW010000012.1 Protein Homology CDS 20655 23426 . - 0 ID=cds-HIH2231465.1;Parent=gene-ACYKK2_000800;Dbxref=NCBI_GP:HIH2231465.1;Name=HIH2231465.1;Ontology_term=GO:0016491,GO:0046872,GO:0050660,GO:0051536,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,flavin adenine dinucleotide binding|0050660||IEA,iron-sulfur cluster binding|0051536||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344954.1;locus_tag=ACYKK2_000800;product=FAD-binding and (Fe-S)-binding domain-containing protein;protein_id=HIH2231465.1;transl_table=11 DBLQKW010000012.1 tpg gene 23578 24000 . + . ID=gene-ACYKK2_000801;Name=cgb;gbkey=Gene;gene=cgb;gene_biotype=protein_coding;locus_tag=ACYKK2_000801 DBLQKW010000012.1 Protein Homology CDS 23578 24000 . + 0 ID=cds-HIH2231466.1;Parent=gene-ACYKK2_000801;Dbxref=NCBI_GP:HIH2231466.1;Name=HIH2231466.1;gbkey=CDS;gene=cgb;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344955.1;locus_tag=ACYKK2_000801;product=single-domain globin Cgb;protein_id=HIH2231466.1;transl_table=11 DBLQKW010000012.1 tpg gene 24020 25651 . - . ID=gene-ACYKK2_000802;Name=ACYKK2_000802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000802 DBLQKW010000012.1 Protein Homology CDS 24020 25651 . - 0 ID=cds-HIH2231467.1;Parent=gene-ACYKK2_000802;Dbxref=NCBI_GP:HIH2231467.1;Name=HIH2231467.1;Ontology_term=GO:0015833,GO:0140359,GO:1904680;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344956.1;locus_tag=ACYKK2_000802;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=HIH2231467.1;transl_table=11 DBLQKW010000012.1 tpg gene 25701 26996 . - . ID=gene-ACYKK2_000803;Name=ACYKK2_000803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000803 DBLQKW010000012.1 Protein Homology CDS 25701 26996 . - 0 ID=cds-HIH2231468.1;Parent=gene-ACYKK2_000803;Dbxref=NCBI_GP:HIH2231468.1;Name=HIH2231468.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344957.1;locus_tag=ACYKK2_000803;product=MFS transporter;protein_id=HIH2231468.1;transl_table=11 DBLQKW010000012.1 tpg gene 27083 27880 . + . ID=gene-ACYKK2_000804;Name=ACYKK2_000804;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000804 DBLQKW010000012.1 Protein Homology CDS 27083 27880 . + 0 ID=cds-HIH2231469.1;Parent=gene-ACYKK2_000804;Dbxref=NCBI_GP:HIH2231469.1;Name=HIH2231469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344958.1;locus_tag=ACYKK2_000804;product=MBL fold metallo-hydrolase;protein_id=HIH2231469.1;transl_table=11 DBLQKW010000012.1 tpg gene 27968 28186 . + . ID=gene-ACYKK2_000805;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=ACYKK2_000805 DBLQKW010000012.1 Protein Homology CDS 27968 28186 . + 0 ID=cds-HIH2231470.1;Parent=gene-ACYKK2_000805;Dbxref=NCBI_GP:HIH2231470.1;Name=HIH2231470.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344959.1;locus_tag=ACYKK2_000805;product=translation initiation factor IF-1;protein_id=HIH2231470.1;transl_table=11 DBLQKW010000012.1 tpg gene 28358 28471 . + . ID=gene-ACYKK2_000806;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=ACYKK2_000806 DBLQKW010000012.1 Protein Homology CDS 28358 28471 . + 0 ID=cds-HIH2231471.1;Parent=gene-ACYKK2_000806;Dbxref=NCBI_GP:HIH2231471.1;Name=HIH2231471.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015896560.1;locus_tag=ACYKK2_000806;product=50S ribosomal protein L36;protein_id=HIH2231471.1;transl_table=11 DBLQKW010000012.1 tpg gene 28474 28839 . + . ID=gene-ACYKK2_000807;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=ACYKK2_000807 DBLQKW010000012.1 Protein Homology CDS 28474 28839 . + 0 ID=cds-HIH2231472.1;Parent=gene-ACYKK2_000807;Dbxref=NCBI_GP:HIH2231472.1;Name=HIH2231472.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344961.1;locus_tag=ACYKK2_000807;product=30S ribosomal protein S13;protein_id=HIH2231472.1;transl_table=11 DBLQKW010000012.1 tpg gene 28849 29241 . + . ID=gene-ACYKK2_000808;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=ACYKK2_000808 DBLQKW010000012.1 Protein Homology CDS 28849 29241 . + 0 ID=cds-HIH2231473.1;Parent=gene-ACYKK2_000808;Dbxref=NCBI_GP:HIH2231473.1;Name=HIH2231473.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344962.1;locus_tag=ACYKK2_000808;product=30S ribosomal protein S11;protein_id=HIH2231473.1;transl_table=11 DBLQKW010000012.1 tpg gene 29269 29895 . + . ID=gene-ACYKK2_000809;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=ACYKK2_000809 DBLQKW010000012.1 Protein Homology CDS 29269 29895 . + 0 ID=cds-HIH2231474.1;Parent=gene-ACYKK2_000809;Dbxref=NCBI_GP:HIH2231474.1;Name=HIH2231474.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002856574.1;locus_tag=ACYKK2_000809;product=30S ribosomal protein S4;protein_id=HIH2231474.1;transl_table=11 DBLQKW010000012.1 tpg gene 29908 30921 . + . ID=gene-ACYKK2_000810;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=ACYKK2_000810 DBLQKW010000012.1 Protein Homology CDS 29908 30921 . + 0 ID=cds-HIH2231475.1;Parent=gene-ACYKK2_000810;Dbxref=NCBI_GP:HIH2231475.1;Name=HIH2231475.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoA;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344964.1;locus_tag=ACYKK2_000810;product=DNA-directed RNA polymerase subunit alpha;protein_id=HIH2231475.1;transl_table=11 DBLQKW010000012.1 tpg gene 30925 31278 . + . ID=gene-ACYKK2_000811;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=ACYKK2_000811 DBLQKW010000012.1 Protein Homology CDS 30925 31278 . + 0 ID=cds-HIH2231476.1;Parent=gene-ACYKK2_000811;Dbxref=NCBI_GP:HIH2231476.1;Name=HIH2231476.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344965.1;locus_tag=ACYKK2_000811;product=50S ribosomal protein L17;protein_id=HIH2231476.1;transl_table=11 DBLQKW010000012.1 tpg gene 31451 32350 . + . ID=gene-ACYKK2_000812;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=ACYKK2_000812 DBLQKW010000012.1 Protein Homology CDS 31451 32350 . + 0 ID=cds-HIH2231477.1;Parent=gene-ACYKK2_000812;Dbxref=NCBI_GP:HIH2231477.1;Name=HIH2231477.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344966.1;locus_tag=ACYKK2_000812;product=ATP phosphoribosyltransferase;protein_id=HIH2231477.1;transl_table=11 DBLQKW010000012.1 tpg gene 32358 33644 . + . ID=gene-ACYKK2_000813;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=ACYKK2_000813 DBLQKW010000012.1 Protein Homology CDS 32358 33644 . + 0 ID=cds-HIH2231478.1;Parent=gene-ACYKK2_000813;Dbxref=NCBI_GP:HIH2231478.1;Name=HIH2231478.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344967.1;locus_tag=ACYKK2_000813;product=histidinol dehydrogenase;protein_id=HIH2231478.1;transl_table=11 DBLQKW010000012.1 tpg gene 33641 34699 . + . ID=gene-ACYKK2_000814;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=ACYKK2_000814 DBLQKW010000012.1 Protein Homology CDS 33641 34699 . + 0 ID=cds-HIH2231479.1;Parent=gene-ACYKK2_000814;Dbxref=NCBI_GP:HIH2231479.1;Name=HIH2231479.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344968.1;locus_tag=ACYKK2_000814;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=HIH2231479.1;transl_table=11 DBLQKW010000012.1 tpg gene 34696 35283 . + . ID=gene-ACYKK2_000815;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=ACYKK2_000815 DBLQKW010000012.1 Protein Homology CDS 34696 35283 . + 0 ID=cds-HIH2231480.1;Parent=gene-ACYKK2_000815;Dbxref=NCBI_GP:HIH2231480.1;Name=HIH2231480.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344969.1;locus_tag=ACYKK2_000815;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=HIH2231480.1;transl_table=11 DBLQKW010000012.1 tpg gene 35280 36011 . + . ID=gene-ACYKK2_000816;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=ACYKK2_000816 DBLQKW010000012.1 Protein Homology CDS 35280 36011 . + 0 ID=cds-HIH2231481.1;Parent=gene-ACYKK2_000816;Dbxref=NCBI_GP:HIH2231481.1;Name=HIH2231481.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344970.1;locus_tag=ACYKK2_000816;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=HIH2231481.1;transl_table=11 DBLQKW010000012.1 tpg gene 35996 36934 . + . ID=gene-ACYKK2_000817;Name=ACYKK2_000817;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000817 DBLQKW010000012.1 Protein Homology CDS 35996 36934 . + 0 ID=cds-HIH2231482.1;Parent=gene-ACYKK2_000817;Dbxref=NCBI_GP:HIH2231482.1;Name=HIH2231482.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344971.1;locus_tag=ACYKK2_000817;product=HTH domain-containing protein;protein_id=HIH2231482.1;transl_table=11 DBLQKW010000012.1 tpg gene 36935 37702 . + . ID=gene-ACYKK2_000818;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=ACYKK2_000818 DBLQKW010000012.1 Protein Homology CDS 36935 37702 . + 0 ID=cds-HIH2231483.1;Parent=gene-ACYKK2_000818;Dbxref=NCBI_GP:HIH2231483.1;Name=HIH2231483.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344972.1;locus_tag=ACYKK2_000818;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=HIH2231483.1;transl_table=11 DBLQKW010000012.1 tpg gene 37704 38327 . + . ID=gene-ACYKK2_000819;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=ACYKK2_000819 DBLQKW010000012.1 Protein Homology CDS 37704 38327 . + 0 ID=cds-HIH2231484.1;Parent=gene-ACYKK2_000819;Dbxref=NCBI_GP:HIH2231484.1;Name=HIH2231484.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344973.1;locus_tag=ACYKK2_000819;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=HIH2231484.1;transl_table=11 DBLQKW010000012.1 tpg gene 38353 39513 . - . ID=gene-ACYKK2_000820;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=ACYKK2_000820 DBLQKW010000012.1 Protein Homology CDS 38353 39513 . - 0 ID=cds-HIH2231485.1;Parent=gene-ACYKK2_000820;Dbxref=NCBI_GP:HIH2231485.1;Name=HIH2231485.1;gbkey=CDS;gene=dapD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344974.1;locus_tag=ACYKK2_000820;product=tetrahydrodipicolinate N-succinyltransferase N-terminal domain-containing protein;protein_id=HIH2231485.1;transl_table=11 DBLQKW010000012.1 tpg gene 39539 40645 . - . ID=gene-ACYKK2_000821;Name=mrp;gbkey=Gene;gene=mrp;gene_biotype=protein_coding;locus_tag=ACYKK2_000821 DBLQKW010000012.1 Protein Homology CDS 39539 40645 . - 0 ID=cds-HIH2231486.1;Parent=gene-ACYKK2_000821;Dbxref=NCBI_GP:HIH2231486.1;Name=HIH2231486.1;Ontology_term=GO:0005524,GO:0016887,GO:0046872,GO:0051536,GO:0140663;gbkey=CDS;gene=mrp;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,ATP-dependent FeS chaperone activity|0140663||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344975.1;locus_tag=ACYKK2_000821;product=Mrp/NBP35 family ATP-binding protein;protein_id=HIH2231486.1;transl_table=11 DBLQKW010000012.1 tpg gene 40768 41883 . + . ID=gene-ACYKK2_000822;Name=ispDF;gbkey=Gene;gene=ispDF;gene_biotype=protein_coding;locus_tag=ACYKK2_000822 DBLQKW010000012.1 Protein Homology CDS 40768 41883 . + 0 ID=cds-HIH2231487.1;Parent=gene-ACYKK2_000822;Dbxref=NCBI_GP:HIH2231487.1;Name=HIH2231487.1;Ontology_term=GO:0008299,GO:0016114,GO:0008685,GO:0050518;gbkey=CDS;gene=ispDF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA,2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344976.1;locus_tag=ACYKK2_000822;product=bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=HIH2231487.1;transl_table=11 DBLQKW010000012.1 tpg gene 41880 42767 . + . ID=gene-ACYKK2_000823;Name=ACYKK2_000823;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000823 DBLQKW010000012.1 Protein Homology CDS 41880 42767 . + 0 ID=cds-HIH2231488.1;Parent=gene-ACYKK2_000823;Dbxref=NCBI_GP:HIH2231488.1;Name=HIH2231488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344977.1;locus_tag=ACYKK2_000823;product=response regulator;protein_id=HIH2231488.1;transl_table=11 DBLQKW010000012.1 tpg gene 42745 43905 . + . ID=gene-ACYKK2_000824;Name=ACYKK2_000824;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000824 DBLQKW010000012.1 Protein Homology CDS 42745 43905 . + 0 ID=cds-HIH2231489.1;Parent=gene-ACYKK2_000824;Dbxref=NCBI_GP:HIH2231489.1;Name=HIH2231489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344978.1;locus_tag=ACYKK2_000824;product=sulfate adenylyltransferase;protein_id=HIH2231489.1;transl_table=11 DBLQKW010000012.1 tpg gene 43910 44410 . + . ID=gene-ACYKK2_000825;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=ACYKK2_000825 DBLQKW010000012.1 Protein Homology CDS 43910 44410 . + 0 ID=cds-HIH2231490.1;Parent=gene-ACYKK2_000825;Dbxref=NCBI_GP:HIH2231490.1;Name=HIH2231490.1;Ontology_term=GO:0006644,GO:0042578,GO:0046872;gbkey=CDS;gene=pgpA;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=phospholipid metabolic process|0006644||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344979.1;locus_tag=ACYKK2_000825;product=phosphatidylglycerophosphatase A family protein;protein_id=HIH2231490.1;transl_table=11 DBLQKW010000012.1 tpg gene 44489 44752 . + . ID=gene-ACYKK2_000826;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=ACYKK2_000826 DBLQKW010000012.1 Protein Homology CDS 44489 44752 . + 0 ID=cds-HIH2231491.1;Parent=gene-ACYKK2_000826;Dbxref=NCBI_GP:HIH2231491.1;Name=HIH2231491.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344980.1;locus_tag=ACYKK2_000826;product=30S ribosomal protein S20;protein_id=HIH2231491.1;transl_table=11 DBLQKW010000012.1 tpg gene 44771 45838 . + . ID=gene-ACYKK2_000827;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=ACYKK2_000827 DBLQKW010000012.1 Protein Homology CDS 44771 45838 . + 0 ID=cds-HIH2231492.1;Parent=gene-ACYKK2_000827;Dbxref=NCBI_GP:HIH2231492.1;Name=HIH2231492.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344981.1;locus_tag=ACYKK2_000827;product=peptide chain release factor 1;protein_id=HIH2231492.1;transl_table=11 DBLQKW010000012.1 tpg gene 45852 46595 . - . ID=gene-ACYKK2_000828;Name=ACYKK2_000828;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000828 DBLQKW010000012.1 Protein Homology CDS 45852 46595 . - 0 ID=cds-HIH2231493.1;Parent=gene-ACYKK2_000828;Dbxref=NCBI_GP:HIH2231493.1;Name=HIH2231493.1;Ontology_term=GO:0042167,GO:0004392;gbkey=CDS;go_function=heme oxygenase (decyclizing) activity|0004392||IEA;go_process=heme catabolic process|0042167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002870076.1;locus_tag=ACYKK2_000828;product=HugZ family heme oxygenase;protein_id=HIH2231493.1;transl_table=11 ##sequence-region DBLQKW010000013.1 1 41664 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000013.1 tpg region 1 41664 . + . ID=DBLQKW010000013.1:1..41664;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000013.1 tpg gene 37 648 . + . ID=gene-ACYKK2_000829;Name=ACYKK2_000829;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000829 DBLQKW010000013.1 Protein Homology CDS 37 648 . + 0 ID=cds-HIH2231494.1;Parent=gene-ACYKK2_000829;Dbxref=NCBI_GP:HIH2231494.1;Name=HIH2231494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002899959.1;locus_tag=ACYKK2_000829;product=hypothetical protein;protein_id=HIH2231494.1;transl_table=11 DBLQKW010000013.1 tpg gene 650 1801 . + . ID=gene-ACYKK2_000830;Name=hipO;gbkey=Gene;gene=hipO;gene_biotype=protein_coding;locus_tag=ACYKK2_000830 DBLQKW010000013.1 Protein Homology CDS 650 1801 . + 0 ID=cds-HIH2231495.1;Parent=gene-ACYKK2_000830;Dbxref=NCBI_GP:HIH2231495.1;Name=HIH2231495.1;Ontology_term=GO:0016787,GO:0016810;gbkey=CDS;gene=hipO;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344380.1;locus_tag=ACYKK2_000830;product=M20 aminoacylase family protein;protein_id=HIH2231495.1;transl_table=11 DBLQKW010000013.1 tpg gene 1805 2545 . - . ID=gene-ACYKK2_000831;Name=ACYKK2_000831;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000831 DBLQKW010000013.1 Protein Homology CDS 1805 2545 . - 0 ID=cds-HIH2231496.1;Parent=gene-ACYKK2_000831;Dbxref=NCBI_GP:HIH2231496.1;Name=HIH2231496.1;Ontology_term=GO:0033194;gbkey=CDS;go_process=response to hydroperoxide|0033194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344379.1;locus_tag=ACYKK2_000831;product=YaaA family protein;protein_id=HIH2231496.1;transl_table=11 DBLQKW010000013.1 tpg gene 2639 3757 . - . ID=gene-ACYKK2_000832;Name=jlpA;gbkey=Gene;gene=jlpA;gene_biotype=protein_coding;locus_tag=ACYKK2_000832 DBLQKW010000013.1 Protein Homology CDS 2639 3757 . - 0 ID=cds-HIH2231497.1;Parent=gene-ACYKK2_000832;Dbxref=NCBI_GP:HIH2231497.1;Name=HIH2231497.1;gbkey=CDS;gene=jlpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_254520897.1;locus_tag=ACYKK2_000832;product=lipoprotein adhesin JlpA;protein_id=HIH2231497.1;transl_table=11 DBLQKW010000013.1 tpg gene 3978 4817 . + . ID=gene-ACYKK2_000833;Name=cjaA;gbkey=Gene;gene=cjaA;gene_biotype=protein_coding;locus_tag=ACYKK2_000833 DBLQKW010000013.1 Protein Homology CDS 3978 4817 . + 0 ID=cds-HIH2231498.1;Parent=gene-ACYKK2_000833;Dbxref=NCBI_GP:HIH2231498.1;Name=HIH2231498.1;gbkey=CDS;gene=cjaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344377.1;locus_tag=ACYKK2_000833;product=cysteine ABC transporter substrate-binding protein;protein_id=HIH2231498.1;transl_table=11 DBLQKW010000013.1 tpg gene 4858 6105 . + . ID=gene-ACYKK2_000834;Name=cjaB;gbkey=Gene;gene=cjaB;gene_biotype=protein_coding;locus_tag=ACYKK2_000834 DBLQKW010000013.1 Protein Homology CDS 4858 6105 . + 0 ID=cds-HIH2231499.1;Parent=gene-ACYKK2_000834;Dbxref=NCBI_GP:HIH2231499.1;Name=HIH2231499.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=cjaB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344376.1;locus_tag=ACYKK2_000834;product=MFS transporter;protein_id=HIH2231499.1;transl_table=11 DBLQKW010000013.1 tpg gene 6088 7356 . - . ID=gene-ACYKK2_000835;Name=ACYKK2_000835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000835 DBLQKW010000013.1 Protein Homology CDS 6088 7356 . - 0 ID=cds-HIH2231500.1;Parent=gene-ACYKK2_000835;Dbxref=NCBI_GP:HIH2231500.1;Name=HIH2231500.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344375.1;locus_tag=ACYKK2_000835;product=M20/M25/M40 family metallo-hydrolase;protein_id=HIH2231500.1;transl_table=11 DBLQKW010000013.1 tpg gene 7425 7952 . + . ID=gene-ACYKK2_000836;Name=ACYKK2_000836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000836 DBLQKW010000013.1 Protein Homology CDS 7425 7952 . + 0 ID=cds-HIH2231501.1;Parent=gene-ACYKK2_000836;Dbxref=NCBI_GP:HIH2231501.1;Name=HIH2231501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344374.1;locus_tag=ACYKK2_000836;product=thermonuclease family protein;protein_id=HIH2231501.1;transl_table=11 DBLQKW010000013.1 tpg gene 7961 8134 . + . ID=gene-ACYKK2_000837;Name=ACYKK2_000837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000837 DBLQKW010000013.1 Protein Homology CDS 7961 8134 . + 0 ID=cds-HIH2231502.1;Parent=gene-ACYKK2_000837;Dbxref=NCBI_GP:HIH2231502.1;Name=HIH2231502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344373.1;locus_tag=ACYKK2_000837;product=hypothetical protein;protein_id=HIH2231502.1;transl_table=11 DBLQKW010000013.1 tpg gene 8135 8713 . - . ID=gene-ACYKK2_000838;Name=ACYKK2_000838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000838 DBLQKW010000013.1 Protein Homology CDS 8135 8713 . - 0 ID=cds-HIH2231503.1;Parent=gene-ACYKK2_000838;Dbxref=NCBI_GP:HIH2231503.1;Name=HIH2231503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344372.1;locus_tag=ACYKK2_000838;product=hypothetical protein;protein_id=HIH2231503.1;transl_table=11 DBLQKW010000013.1 tpg gene 8786 9676 . - . ID=gene-ACYKK2_000839;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=ACYKK2_000839 DBLQKW010000013.1 Protein Homology CDS 8786 9676 . - 0 ID=cds-HIH2231504.1;Parent=gene-ACYKK2_000839;Dbxref=NCBI_GP:HIH2231504.1;Name=HIH2231504.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344371.1;locus_tag=ACYKK2_000839;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=HIH2231504.1;transl_table=11 DBLQKW010000013.1 tpg pseudogene 9759 11465 . - . ID=gene-ACYKK2_000840;Name=ACYKK2_000840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_000840;pseudo=true DBLQKW010000013.1 Protein Homology CDS 9759 11465 . - 0 ID=cds-ACYKK2_000840;Parent=gene-ACYKK2_000840;Note=frameshifted;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344370.1;locus_tag=ACYKK2_000840;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;pseudo=true;transl_table=11 DBLQKW010000013.1 tpg gene 11524 11664 . - . ID=gene-ACYKK2_000841;Name=ACYKK2_000841;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000841 DBLQKW010000013.1 Protein Homology CDS 11524 11664 . - 0 ID=cds-HIH2231505.1;Parent=gene-ACYKK2_000841;Dbxref=NCBI_GP:HIH2231505.1;Name=HIH2231505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344369.1;locus_tag=ACYKK2_000841;product=hypothetical protein;protein_id=HIH2231505.1;transl_table=11 DBLQKW010000013.1 tpg gene 11927 12250 . - . ID=gene-ACYKK2_000842;Name=ACYKK2_000842;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000842 DBLQKW010000013.1 Protein Homology CDS 11927 12250 . - 0 ID=cds-HIH2231506.1;Parent=gene-ACYKK2_000842;Dbxref=NCBI_GP:HIH2231506.1;Name=HIH2231506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344367.1;locus_tag=ACYKK2_000842;product=hypothetical protein;protein_id=HIH2231506.1;transl_table=11 DBLQKW010000013.1 tpg gene 12341 12643 . - . ID=gene-ACYKK2_000843;Name=ACYKK2_000843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000843 DBLQKW010000013.1 GeneMarkS-2+ CDS 12341 12643 . - 0 ID=cds-HIH2231507.1;Parent=gene-ACYKK2_000843;Dbxref=NCBI_GP:HIH2231507.1;Name=HIH2231507.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_000843;product=hypothetical protein;protein_id=HIH2231507.1;transl_table=11 DBLQKW010000013.1 tpg gene 12646 12948 . - . ID=gene-ACYKK2_000844;Name=ACYKK2_000844;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000844 DBLQKW010000013.1 GeneMarkS-2+ CDS 12646 12948 . - 0 ID=cds-HIH2231508.1;Parent=gene-ACYKK2_000844;Dbxref=NCBI_GP:HIH2231508.1;Name=HIH2231508.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_000844;product=hypothetical protein;protein_id=HIH2231508.1;transl_table=11 DBLQKW010000013.1 tpg gene 13048 13290 . - . ID=gene-ACYKK2_000845;Name=ACYKK2_000845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000845 DBLQKW010000013.1 GeneMarkS-2+ CDS 13048 13290 . - 0 ID=cds-HIH2231509.1;Parent=gene-ACYKK2_000845;Dbxref=NCBI_GP:HIH2231509.1;Name=HIH2231509.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_000845;product=hypothetical protein;protein_id=HIH2231509.1;transl_table=11 DBLQKW010000013.1 tpg gene 13387 13515 . - . ID=gene-ACYKK2_000846;Name=ACYKK2_000846;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000846 DBLQKW010000013.1 GeneMarkS-2+ CDS 13387 13515 . - 0 ID=cds-HIH2231510.1;Parent=gene-ACYKK2_000846;Dbxref=NCBI_GP:HIH2231510.1;Name=HIH2231510.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_000846;product=hypothetical protein;protein_id=HIH2231510.1;transl_table=11 DBLQKW010000013.1 tpg pseudogene 13660 15935 . - . ID=gene-ACYKK2_000847;Name=ACYKK2_000847;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_000847;pseudo=true DBLQKW010000013.1 Protein Homology CDS 13660 15935 . - 0 ID=cds-ACYKK2_000847;Parent=gene-ACYKK2_000847;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344364.1;locus_tag=ACYKK2_000847;product=hypothetical protein;pseudo=true;transl_table=11 DBLQKW010000013.1 tpg gene 16077 16451 . + . ID=gene-ACYKK2_000848;Name=ACYKK2_000848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000848 DBLQKW010000013.1 Protein Homology CDS 16077 16451 . + 0 ID=cds-HIH2231511.1;Parent=gene-ACYKK2_000848;Dbxref=NCBI_GP:HIH2231511.1;Name=HIH2231511.1;Ontology_term=GO:0047617;gbkey=CDS;go_function=fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344363.1;locus_tag=ACYKK2_000848;product=YbgC/FadM family acyl-CoA thioesterase;protein_id=HIH2231511.1;transl_table=11 DBLQKW010000013.1 tpg gene 16443 17633 . - . ID=gene-ACYKK2_000849;Name=ACYKK2_000849;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000849 DBLQKW010000013.1 Protein Homology CDS 16443 17633 . - 0 ID=cds-HIH2231512.1;Parent=gene-ACYKK2_000849;Dbxref=NCBI_GP:HIH2231512.1;Name=HIH2231512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344362.1;locus_tag=ACYKK2_000849;product=hypothetical protein;protein_id=HIH2231512.1;transl_table=11 DBLQKW010000013.1 tpg gene 17630 18238 . - . ID=gene-ACYKK2_000850;Name=ACYKK2_000850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000850 DBLQKW010000013.1 Protein Homology CDS 17630 18238 . - 0 ID=cds-HIH2231513.1;Parent=gene-ACYKK2_000850;Dbxref=NCBI_GP:HIH2231513.1;Name=HIH2231513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344361.1;locus_tag=ACYKK2_000850;product=uracil-DNA glycosylase family protein;protein_id=HIH2231513.1;transl_table=11 DBLQKW010000013.1 tpg gene 18235 18714 . - . ID=gene-ACYKK2_000851;Name=ACYKK2_000851;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000851 DBLQKW010000013.1 Protein Homology CDS 18235 18714 . - 0 ID=cds-HIH2231514.1;Parent=gene-ACYKK2_000851;Dbxref=NCBI_GP:HIH2231514.1;Name=HIH2231514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344360.1;locus_tag=ACYKK2_000851;product=N-acetyltransferase family protein;protein_id=HIH2231514.1;transl_table=11 DBLQKW010000013.1 tpg gene 18845 18979 . + . ID=gene-ACYKK2_000852;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=ACYKK2_000852 DBLQKW010000013.1 Protein Homology CDS 18845 18979 . + 0 ID=cds-HIH2231515.1;Parent=gene-ACYKK2_000852;Dbxref=NCBI_GP:HIH2231515.1;Name=HIH2231515.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344359.1;locus_tag=ACYKK2_000852;product=50S ribosomal protein L34;protein_id=HIH2231515.1;transl_table=11 DBLQKW010000013.1 tpg gene 18976 19302 . + . ID=gene-ACYKK2_000853;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=ACYKK2_000853 DBLQKW010000013.1 Protein Homology CDS 18976 19302 . + 0 ID=cds-HIH2231516.1;Parent=gene-ACYKK2_000853;Dbxref=NCBI_GP:HIH2231516.1;Name=HIH2231516.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344358.1;locus_tag=ACYKK2_000853;product=ribonuclease P protein component;protein_id=HIH2231516.1;transl_table=11 DBLQKW010000013.1 tpg gene 19299 19640 . + . ID=gene-ACYKK2_000854;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=ACYKK2_000854 DBLQKW010000013.1 Protein Homology CDS 19299 19640 . + 0 ID=cds-HIH2231517.1;Parent=gene-ACYKK2_000854;Dbxref=NCBI_GP:HIH2231517.1;Name=HIH2231517.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344357.1;locus_tag=ACYKK2_000854;product=membrane protein insertion efficiency factor YidD;protein_id=HIH2231517.1;transl_table=11 DBLQKW010000013.1 tpg gene 19637 21229 . + . ID=gene-ACYKK2_000855;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=ACYKK2_000855 DBLQKW010000013.1 Protein Homology CDS 19637 21229 . + 0 ID=cds-HIH2231518.1;Parent=gene-ACYKK2_000855;Dbxref=NCBI_GP:HIH2231518.1;Name=HIH2231518.1;gbkey=CDS;gene=yidC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002875431.1;locus_tag=ACYKK2_000855;product=membrane protein insertase YidC;protein_id=HIH2231518.1;transl_table=11 DBLQKW010000013.1 tpg gene 21226 22044 . + . ID=gene-ACYKK2_000856;Name=ACYKK2_000856;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000856 DBLQKW010000013.1 Protein Homology CDS 21226 22044 . + 0 ID=cds-HIH2231519.1;Parent=gene-ACYKK2_000856;Dbxref=NCBI_GP:HIH2231519.1;Name=HIH2231519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344355.1;locus_tag=ACYKK2_000856;product=Jag N-terminal domain-containing protein;protein_id=HIH2231519.1;transl_table=11 DBLQKW010000013.1 tpg gene 22037 23365 . + . ID=gene-ACYKK2_000857;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=ACYKK2_000857 DBLQKW010000013.1 Protein Homology CDS 22037 23365 . + 0 ID=cds-HIH2231520.1;Parent=gene-ACYKK2_000857;Dbxref=NCBI_GP:HIH2231520.1;Name=HIH2231520.1;Ontology_term=GO:0006400,GO:0003924,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344354.1;locus_tag=ACYKK2_000857;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=HIH2231520.1;transl_table=11 DBLQKW010000013.1 tpg gene 23376 25562 . + . ID=gene-ACYKK2_000858;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=ACYKK2_000858 DBLQKW010000013.1 Protein Homology CDS 23376 25562 . + 0 ID=cds-HIH2231521.1;Parent=gene-ACYKK2_000858;Dbxref=NCBI_GP:HIH2231521.1;Name=HIH2231521.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344353.1;locus_tag=ACYKK2_000858;product=phosphoribosylformylglycinamidine synthase subunit PurL;protein_id=HIH2231521.1;transl_table=11 DBLQKW010000013.1 tpg gene 25559 26329 . + . ID=gene-ACYKK2_000859;Name=ACYKK2_000859;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000859 DBLQKW010000013.1 Protein Homology CDS 25559 26329 . + 0 ID=cds-HIH2231522.1;Parent=gene-ACYKK2_000859;Dbxref=NCBI_GP:HIH2231522.1;Name=HIH2231522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344352.1;locus_tag=ACYKK2_000859;product=DnaJ domain-containing protein;protein_id=HIH2231522.1;transl_table=11 DBLQKW010000013.1 tpg gene 26332 27864 . + . ID=gene-ACYKK2_000860;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=ACYKK2_000860 DBLQKW010000013.1 Protein Homology CDS 26332 27864 . + 0 ID=cds-HIH2231523.1;Parent=gene-ACYKK2_000860;Dbxref=NCBI_GP:HIH2231523.1;Name=HIH2231523.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344351.1;locus_tag=ACYKK2_000860;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=HIH2231523.1;transl_table=11 DBLQKW010000013.1 tpg gene 27959 28420 . + . ID=gene-ACYKK2_000861;Name=ACYKK2_000861;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000861 DBLQKW010000013.1 Protein Homology CDS 27959 28420 . + 0 ID=cds-HIH2231524.1;Parent=gene-ACYKK2_000861;Dbxref=NCBI_GP:HIH2231524.1;Name=HIH2231524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002873184.1;locus_tag=ACYKK2_000861;product=hypothetical protein;protein_id=HIH2231524.1;transl_table=11 DBLQKW010000013.1 tpg gene 28877 29410 . + . ID=gene-ACYKK2_000862;Name=ACYKK2_000862;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000862 DBLQKW010000013.1 Protein Homology CDS 28877 29410 . + 0 ID=cds-HIH2231525.1;Parent=gene-ACYKK2_000862;Dbxref=NCBI_GP:HIH2231525.1;Name=HIH2231525.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895878.1;locus_tag=ACYKK2_000862;product=methyl-accepting chemotaxis protein;protein_id=HIH2231525.1;transl_table=11 DBLQKW010000013.1 tpg gene 29426 29545 . + . ID=gene-ACYKK2_000863;Name=ACYKK2_000863;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000863 DBLQKW010000013.1 Protein Homology CDS 29426 29545 . + 0 ID=cds-HIH2231526.1;Parent=gene-ACYKK2_000863;Dbxref=NCBI_GP:HIH2231526.1;Name=HIH2231526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002886201.1;locus_tag=ACYKK2_000863;product=MCP-domain signal transduction protein;protein_id=HIH2231526.1;transl_table=11 DBLQKW010000013.1 tpg gene 29561 29995 . + . ID=gene-ACYKK2_000864;Name=ACYKK2_000864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000864 DBLQKW010000013.1 Protein Homology CDS 29561 29995 . + 0 ID=cds-HIH2231527.1;Parent=gene-ACYKK2_000864;Dbxref=NCBI_GP:HIH2231527.1;Name=HIH2231527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344348.1;locus_tag=ACYKK2_000864;product=META domain-containing protein;protein_id=HIH2231527.1;transl_table=11 DBLQKW010000013.1 tpg gene 30094 31071 . + . ID=gene-ACYKK2_000865;Name=ACYKK2_000865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000865 DBLQKW010000013.1 Protein Homology CDS 30094 31071 . + 0 ID=cds-HIH2231528.1;Parent=gene-ACYKK2_000865;Dbxref=NCBI_GP:HIH2231528.1;Name=HIH2231528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344347.1;locus_tag=ACYKK2_000865;product=agmatine deiminase family protein;protein_id=HIH2231528.1;transl_table=11 DBLQKW010000013.1 tpg gene 31068 31955 . + . ID=gene-ACYKK2_000866;Name=ACYKK2_000866;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000866 DBLQKW010000013.1 Protein Homology CDS 31068 31955 . + 0 ID=cds-HIH2231529.1;Parent=gene-ACYKK2_000866;Dbxref=NCBI_GP:HIH2231529.1;Name=HIH2231529.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344346.1;locus_tag=ACYKK2_000866;product=cation diffusion facilitator family transporter;protein_id=HIH2231529.1;transl_table=11 DBLQKW010000013.1 tpg gene 31952 32824 . + . ID=gene-ACYKK2_000867;Name=ACYKK2_000867;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000867 DBLQKW010000013.1 Protein Homology CDS 31952 32824 . + 0 ID=cds-HIH2231530.1;Parent=gene-ACYKK2_000867;Dbxref=NCBI_GP:HIH2231530.1;Name=HIH2231530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344345.1;locus_tag=ACYKK2_000867;product=N-carbamoylputrescine amidohydrolase;protein_id=HIH2231530.1;transl_table=11 DBLQKW010000013.1 tpg gene 32836 34182 . - . ID=gene-ACYKK2_000868;Name=ACYKK2_000868;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000868 DBLQKW010000013.1 Protein Homology CDS 32836 34182 . - 0 ID=cds-HIH2231531.1;Parent=gene-ACYKK2_000868;Dbxref=NCBI_GP:HIH2231531.1;Name=HIH2231531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344344.1;locus_tag=ACYKK2_000868;product=SH3 domain-containing protein;protein_id=HIH2231531.1;transl_table=11 DBLQKW010000013.1 tpg gene 34231 35574 . + . ID=gene-ACYKK2_000869;Name=pif1;gbkey=Gene;gene=pif1;gene_biotype=protein_coding;locus_tag=ACYKK2_000869 DBLQKW010000013.1 Protein Homology CDS 34231 35574 . + 0 ID=cds-HIH2231532.1;Parent=gene-ACYKK2_000869;Dbxref=NCBI_GP:HIH2231532.1;Name=HIH2231532.1;gbkey=CDS;gene=pif1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344343.1;locus_tag=ACYKK2_000869;product=ATP-dependent DNA helicase Pif1;protein_id=HIH2231532.1;transl_table=11 DBLQKW010000013.1 tpg gene 35584 36318 . + . ID=gene-ACYKK2_000870;Name=ACYKK2_000870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000870 DBLQKW010000013.1 Protein Homology CDS 35584 36318 . + 0 ID=cds-HIH2231533.1;Parent=gene-ACYKK2_000870;Dbxref=NCBI_GP:HIH2231533.1;Name=HIH2231533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344342.1;locus_tag=ACYKK2_000870;product=hypothetical protein;protein_id=HIH2231533.1;transl_table=11 DBLQKW010000013.1 tpg gene 36315 36824 . - . ID=gene-ACYKK2_000871;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=ACYKK2_000871 DBLQKW010000013.1 Protein Homology CDS 36315 36824 . - 0 ID=cds-HIH2231534.1;Parent=gene-ACYKK2_000871;Dbxref=NCBI_GP:HIH2231534.1;Name=HIH2231534.1;gbkey=CDS;gene=lolA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344341.1;locus_tag=ACYKK2_000871;product=LolA-like outer membrane lipoprotein chaperone;protein_id=HIH2231534.1;transl_table=11 DBLQKW010000013.1 tpg gene 36924 39512 . + . ID=gene-ACYKK2_000872;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=ACYKK2_000872 DBLQKW010000013.1 Protein Homology CDS 36924 39512 . + 0 ID=cds-HIH2231535.1;Parent=gene-ACYKK2_000872;Dbxref=NCBI_GP:HIH2231535.1;Name=HIH2231535.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344340.1;locus_tag=ACYKK2_000872;product=preprotein translocase subunit SecA;protein_id=HIH2231535.1;transl_table=11 DBLQKW010000013.1 tpg gene 39509 40714 . + . ID=gene-ACYKK2_000873;Name=ACYKK2_000873;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000873 DBLQKW010000013.1 Protein Homology CDS 39509 40714 . + 0 ID=cds-HIH2231536.1;Parent=gene-ACYKK2_000873;Dbxref=NCBI_GP:HIH2231536.1;Name=HIH2231536.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344339.1;locus_tag=ACYKK2_000873;product=ABC transporter permease;protein_id=HIH2231536.1;transl_table=11 DBLQKW010000013.1 tpg gene 40737 41522 . + . ID=gene-ACYKK2_000874;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=ACYKK2_000874 DBLQKW010000013.1 Protein Homology CDS 40737 41522 . + 0 ID=cds-HIH2231537.1;Parent=gene-ACYKK2_000874;Dbxref=NCBI_GP:HIH2231537.1;Name=HIH2231537.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;gene=glnP;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344338.1;locus_tag=ACYKK2_000874;product=amino acid ABC transporter permease;protein_id=HIH2231537.1;transl_table=11 DBLQKW010000013.1 tpg gene 41584 41659 . + . ID=gene-ACYKK2_000875;Name=ACYKK2_000875;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_000875 DBLQKW010000013.1 tRNAscan-SE tRNA 41584 41659 . + . ID=rna-ACYKK2_000875;Parent=gene-ACYKK2_000875;anticodon=(pos:41617..41619);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_000875;product=tRNA-Lys DBLQKW010000013.1 tRNAscan-SE exon 41584 41659 . + . ID=exon-ACYKK2_000875-1;Parent=rna-ACYKK2_000875;anticodon=(pos:41617..41619);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_000875;product=tRNA-Lys ##sequence-region DBLQKW010000014.1 1 37489 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000014.1 tpg region 1 37489 . + . ID=DBLQKW010000014.1:1..37489;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000014.1 tpg gene 110 994 . - . ID=gene-ACYKK2_000876;Name=ACYKK2_000876;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000876 DBLQKW010000014.1 GeneMarkS-2+ CDS 110 994 . - 0 ID=cds-HIH2231538.1;Parent=gene-ACYKK2_000876;Dbxref=NCBI_GP:HIH2231538.1;Name=HIH2231538.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_000876;product=hypothetical protein;protein_id=HIH2231538.1;transl_table=11 DBLQKW010000014.1 tpg gene 1136 1768 . - . ID=gene-ACYKK2_000877;Name=ACYKK2_000877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000877 DBLQKW010000014.1 Protein Homology CDS 1136 1768 . - 0 ID=cds-HIH2231539.1;Parent=gene-ACYKK2_000877;Dbxref=NCBI_GP:HIH2231539.1;Name=HIH2231539.1;Ontology_term=GO:0006282,GO:0006355,GO:0003677,GO:0003700,GO:0004252;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002795438.1;locus_tag=ACYKK2_000877;product=LexA family transcriptional regulator;protein_id=HIH2231539.1;transl_table=11 DBLQKW010000014.1 tpg gene 1913 2113 . + . ID=gene-ACYKK2_000878;Name=ACYKK2_000878;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000878 DBLQKW010000014.1 Protein Homology CDS 1913 2113 . + 0 ID=cds-HIH2231540.1;Parent=gene-ACYKK2_000878;Dbxref=NCBI_GP:HIH2231540.1;Name=HIH2231540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002784549.1;locus_tag=ACYKK2_000878;product=hypothetical protein;protein_id=HIH2231540.1;transl_table=11 DBLQKW010000014.1 tpg gene 2110 4185 . + . ID=gene-ACYKK2_000879;Name=ACYKK2_000879;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000879 DBLQKW010000014.1 Protein Homology CDS 2110 4185 . + 0 ID=cds-HIH2231541.1;Parent=gene-ACYKK2_000879;Dbxref=NCBI_GP:HIH2231541.1;Name=HIH2231541.1;Ontology_term=GO:0006310,GO:0006313,GO:0015074,GO:0032196,GO:0003677,GO:0004803,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,DNA transposition|0006313||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002873713.1;locus_tag=ACYKK2_000879;product=transposase;protein_id=HIH2231541.1;transl_table=11 DBLQKW010000014.1 tpg gene 4255 5178 . + . ID=gene-ACYKK2_000880;Name=ACYKK2_000880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000880 DBLQKW010000014.1 Protein Homology CDS 4255 5178 . + 0 ID=cds-HIH2231542.1;Parent=gene-ACYKK2_000880;Dbxref=NCBI_GP:HIH2231542.1;Name=HIH2231542.1;Ontology_term=GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002795447.1;locus_tag=ACYKK2_000880;product=AAA family ATPase;protein_id=HIH2231542.1;transl_table=11 DBLQKW010000014.1 tpg gene 5181 5372 . + . ID=gene-ACYKK2_000881;Name=ACYKK2_000881;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000881 DBLQKW010000014.1 Protein Homology CDS 5181 5372 . + 0 ID=cds-HIH2231543.1;Parent=gene-ACYKK2_000881;Dbxref=NCBI_GP:HIH2231543.1;Name=HIH2231543.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002791422.1;locus_tag=ACYKK2_000881;product=sigma factor-like helix-turn-helix DNA-binding protein;protein_id=HIH2231543.1;transl_table=11 DBLQKW010000014.1 tpg gene 5369 5554 . + . ID=gene-ACYKK2_000882;Name=ACYKK2_000882;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000882 DBLQKW010000014.1 Protein Homology CDS 5369 5554 . + 0 ID=cds-HIH2231544.1;Parent=gene-ACYKK2_000882;Dbxref=NCBI_GP:HIH2231544.1;Name=HIH2231544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002824157.1;locus_tag=ACYKK2_000882;product=hypothetical protein;protein_id=HIH2231544.1;transl_table=11 DBLQKW010000014.1 tpg gene 5611 5952 . + . ID=gene-ACYKK2_000883;Name=ACYKK2_000883;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000883 DBLQKW010000014.1 Protein Homology CDS 5611 5952 . + 0 ID=cds-HIH2231545.1;Parent=gene-ACYKK2_000883;Dbxref=NCBI_GP:HIH2231545.1;Name=HIH2231545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002791419.1;locus_tag=ACYKK2_000883;product=DUF4406 domain-containing protein;protein_id=HIH2231545.1;transl_table=11 DBLQKW010000014.1 tpg gene 6059 6544 . + . ID=gene-ACYKK2_000884;Name=ACYKK2_000884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000884 DBLQKW010000014.1 Protein Homology CDS 6059 6544 . + 0 ID=cds-HIH2231546.1;Parent=gene-ACYKK2_000884;Dbxref=NCBI_GP:HIH2231546.1;Name=HIH2231546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806832.1;locus_tag=ACYKK2_000884;product=host-nuclease inhibitor Gam family protein;protein_id=HIH2231546.1;transl_table=11 DBLQKW010000014.1 tpg gene 6541 6720 . + . ID=gene-ACYKK2_000885;Name=ACYKK2_000885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000885 DBLQKW010000014.1 Protein Homology CDS 6541 6720 . + 0 ID=cds-HIH2231547.1;Parent=gene-ACYKK2_000885;Dbxref=NCBI_GP:HIH2231547.1;Name=HIH2231547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002791416.1;locus_tag=ACYKK2_000885;product=hypothetical protein;protein_id=HIH2231547.1;transl_table=11 DBLQKW010000014.1 tpg gene 6784 7056 . + . ID=gene-ACYKK2_000886;Name=ACYKK2_000886;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000886 DBLQKW010000014.1 Protein Homology CDS 6784 7056 . + 0 ID=cds-HIH2231548.1;Parent=gene-ACYKK2_000886;Dbxref=NCBI_GP:HIH2231548.1;Name=HIH2231548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002841988.1;locus_tag=ACYKK2_000886;product=hypothetical protein;protein_id=HIH2231548.1;transl_table=11 DBLQKW010000014.1 tpg gene 7053 7484 . + . ID=gene-ACYKK2_000887;Name=ACYKK2_000887;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000887 DBLQKW010000014.1 GeneMarkS-2+ CDS 7053 7484 . + 0 ID=cds-HIH2231549.1;Parent=gene-ACYKK2_000887;Dbxref=NCBI_GP:HIH2231549.1;Name=HIH2231549.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_000887;product=hypothetical protein;protein_id=HIH2231549.1;transl_table=11 DBLQKW010000014.1 tpg gene 7495 7902 . + . ID=gene-ACYKK2_000888;Name=ACYKK2_000888;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000888 DBLQKW010000014.1 Protein Homology CDS 7495 7902 . + 0 ID=cds-HIH2231550.1;Parent=gene-ACYKK2_000888;Dbxref=NCBI_GP:HIH2231550.1;Name=HIH2231550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002875043.1;locus_tag=ACYKK2_000888;product=YopX family protein;protein_id=HIH2231550.1;transl_table=11 DBLQKW010000014.1 tpg gene 8012 8974 . + . ID=gene-ACYKK2_000889;Name=ACYKK2_000889;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000889 DBLQKW010000014.1 Protein Homology CDS 8012 8974 . + 0 ID=cds-HIH2231551.1;Parent=gene-ACYKK2_000889;Dbxref=NCBI_GP:HIH2231551.1;Name=HIH2231551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002873719.1;locus_tag=ACYKK2_000889;product=hypothetical protein;protein_id=HIH2231551.1;transl_table=11 DBLQKW010000014.1 tpg gene 8971 9240 . + . ID=gene-ACYKK2_000890;Name=ACYKK2_000890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000890 DBLQKW010000014.1 GeneMarkS-2+ CDS 8971 9240 . + 0 ID=cds-HIH2231552.1;Parent=gene-ACYKK2_000890;Dbxref=NCBI_GP:HIH2231552.1;Name=HIH2231552.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_000890;product=hypothetical protein;protein_id=HIH2231552.1;transl_table=11 DBLQKW010000014.1 tpg gene 9240 9932 . + . ID=gene-ACYKK2_000891;Name=ACYKK2_000891;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000891 DBLQKW010000014.1 GeneMarkS-2+ CDS 9240 9932 . + 0 ID=cds-HIH2231553.1;Parent=gene-ACYKK2_000891;Dbxref=NCBI_GP:HIH2231553.1;Name=HIH2231553.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_000891;product=hypothetical protein;protein_id=HIH2231553.1;transl_table=11 DBLQKW010000014.1 tpg gene 9929 10378 . + . ID=gene-ACYKK2_000892;Name=ACYKK2_000892;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000892 DBLQKW010000014.1 Protein Homology CDS 9929 10378 . + 0 ID=cds-HIH2231554.1;Parent=gene-ACYKK2_000892;Dbxref=NCBI_GP:HIH2231554.1;Name=HIH2231554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002852108.1;locus_tag=ACYKK2_000892;product=regulatory protein GemA;protein_id=HIH2231554.1;transl_table=11 DBLQKW010000014.1 tpg gene 10425 10700 . + . ID=gene-ACYKK2_000893;Name=ACYKK2_000893;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000893 DBLQKW010000014.1 GeneMarkS-2+ CDS 10425 10700 . + 0 ID=cds-HIH2231555.1;Parent=gene-ACYKK2_000893;Dbxref=NCBI_GP:HIH2231555.1;Name=HIH2231555.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_000893;product=hypothetical protein;protein_id=HIH2231555.1;transl_table=11 DBLQKW010000014.1 tpg gene 10692 10985 . - . ID=gene-ACYKK2_000894;Name=ACYKK2_000894;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000894 DBLQKW010000014.1 Protein Homology CDS 10692 10985 . - 0 ID=cds-HIH2231556.1;Parent=gene-ACYKK2_000894;Dbxref=NCBI_GP:HIH2231556.1;Name=HIH2231556.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: protein motif:HMM:NF016146.6;locus_tag=ACYKK2_000894;product=endonuclease;protein_id=HIH2231556.1;transl_table=11 DBLQKW010000014.1 tpg gene 11155 11439 . + . ID=gene-ACYKK2_000895;Name=ACYKK2_000895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000895 DBLQKW010000014.1 Protein Homology CDS 11155 11439 . + 0 ID=cds-HIH2231557.1;Parent=gene-ACYKK2_000895;Dbxref=NCBI_GP:HIH2231557.1;Name=HIH2231557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002888031.1;locus_tag=ACYKK2_000895;product=Mor transcription activator family protein;protein_id=HIH2231557.1;transl_table=11 DBLQKW010000014.1 tpg gene 11436 12413 . - . ID=gene-ACYKK2_000896;Name=ACYKK2_000896;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000896 DBLQKW010000014.1 Protein Homology CDS 11436 12413 . - 0 ID=cds-HIH2231558.1;Parent=gene-ACYKK2_000896;Dbxref=NCBI_GP:HIH2231558.1;Name=HIH2231558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002855003.1;locus_tag=ACYKK2_000896;product=phage late control D family protein;protein_id=HIH2231558.1;transl_table=11 DBLQKW010000014.1 tpg gene 12407 12598 . - . ID=gene-ACYKK2_000897;Name=ACYKK2_000897;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000897 DBLQKW010000014.1 Protein Homology CDS 12407 12598 . - 0 ID=cds-HIH2231559.1;Parent=gene-ACYKK2_000897;Dbxref=NCBI_GP:HIH2231559.1;Name=HIH2231559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002784520.1;locus_tag=ACYKK2_000897;product=tail protein X;protein_id=HIH2231559.1;transl_table=11 DBLQKW010000014.1 tpg gene 12591 12965 . - . ID=gene-ACYKK2_000898;Name=ACYKK2_000898;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000898 DBLQKW010000014.1 Protein Homology CDS 12591 12965 . - 0 ID=cds-HIH2231560.1;Parent=gene-ACYKK2_000898;Dbxref=NCBI_GP:HIH2231560.1;Name=HIH2231560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935496.1;locus_tag=ACYKK2_000898;product=phage tail protein;protein_id=HIH2231560.1;transl_table=11 DBLQKW010000014.1 tpg gene 13090 14328 . - . ID=gene-ACYKK2_000899;Name=ACYKK2_000899;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000899 DBLQKW010000014.1 Protein Homology CDS 13090 14328 . - 0 ID=cds-HIH2231561.1;Parent=gene-ACYKK2_000899;Dbxref=NCBI_GP:HIH2231561.1;Name=HIH2231561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002909482.1;locus_tag=ACYKK2_000899;product=phage minor head protein;protein_id=HIH2231561.1;transl_table=11 DBLQKW010000014.1 tpg gene 14330 15700 . - . ID=gene-ACYKK2_000900;Name=ACYKK2_000900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000900 DBLQKW010000014.1 Protein Homology CDS 14330 15700 . - 0 ID=cds-HIH2231562.1;Parent=gene-ACYKK2_000900;Dbxref=NCBI_GP:HIH2231562.1;Name=HIH2231562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002872709.1;locus_tag=ACYKK2_000900;product=phage portal protein family protein;protein_id=HIH2231562.1;transl_table=11 DBLQKW010000014.1 tpg gene 15710 17380 . - . ID=gene-ACYKK2_000901;Name=terL;gbkey=Gene;gene=terL;gene_biotype=protein_coding;locus_tag=ACYKK2_000901 DBLQKW010000014.1 Protein Homology CDS 15710 17380 . - 0 ID=cds-HIH2231563.1;Parent=gene-ACYKK2_000901;Dbxref=NCBI_GP:HIH2231563.1;Name=HIH2231563.1;gbkey=CDS;gene=terL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002784515.1;locus_tag=ACYKK2_000901;product=phage terminase large subunit;protein_id=HIH2231563.1;transl_table=11 DBLQKW010000014.1 tpg gene 17380 17979 . - . ID=gene-ACYKK2_000902;Name=ACYKK2_000902;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000902 DBLQKW010000014.1 Protein Homology CDS 17380 17979 . - 0 ID=cds-HIH2231564.1;Parent=gene-ACYKK2_000902;Dbxref=NCBI_GP:HIH2231564.1;Name=HIH2231564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004297483.1;locus_tag=ACYKK2_000902;product=DUF1804 family protein;protein_id=HIH2231564.1;transl_table=11 DBLQKW010000014.1 tpg gene 17972 18430 . - . ID=gene-ACYKK2_000903;Name=ACYKK2_000903;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000903 DBLQKW010000014.1 Protein Homology CDS 17972 18430 . - 0 ID=cds-HIH2231565.1;Parent=gene-ACYKK2_000903;Dbxref=NCBI_GP:HIH2231565.1;Name=HIH2231565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002855185.1;locus_tag=ACYKK2_000903;product=phage protein Gp36 family protein;protein_id=HIH2231565.1;transl_table=11 DBLQKW010000014.1 tpg gene 18546 19523 . - . ID=gene-ACYKK2_000904;Name=ACYKK2_000904;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000904 DBLQKW010000014.1 Protein Homology CDS 18546 19523 . - 0 ID=cds-HIH2231566.1;Parent=gene-ACYKK2_000904;Dbxref=NCBI_GP:HIH2231566.1;Name=HIH2231566.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015802.6;locus_tag=ACYKK2_000904;product=major capsid protein;protein_id=HIH2231566.1;transl_table=11 DBLQKW010000014.1 tpg gene 19526 20053 . - . ID=gene-ACYKK2_000905;Name=ACYKK2_000905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000905 DBLQKW010000014.1 Protein Homology CDS 19526 20053 . - 0 ID=cds-HIH2231567.1;Parent=gene-ACYKK2_000905;Dbxref=NCBI_GP:HIH2231567.1;Name=HIH2231567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010790808.1;locus_tag=ACYKK2_000905;product=hypothetical protein;protein_id=HIH2231567.1;transl_table=11 DBLQKW010000014.1 tpg gene 20056 20871 . - . ID=gene-ACYKK2_000906;Name=ACYKK2_000906;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000906 DBLQKW010000014.1 Protein Homology CDS 20056 20871 . - 0 ID=cds-HIH2231568.1;Parent=gene-ACYKK2_000906;Dbxref=NCBI_GP:HIH2231568.1;Name=HIH2231568.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021627.6;locus_tag=ACYKK2_000906;product=phage protease;protein_id=HIH2231568.1;transl_table=11 DBLQKW010000014.1 tpg gene 20873 21307 . - . ID=gene-ACYKK2_000907;Name=ACYKK2_000907;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000907 DBLQKW010000014.1 GeneMarkS-2+ CDS 20873 21307 . - 0 ID=cds-HIH2231569.1;Parent=gene-ACYKK2_000907;Dbxref=NCBI_GP:HIH2231569.1;Name=HIH2231569.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_000907;product=hypothetical protein;protein_id=HIH2231569.1;transl_table=11 DBLQKW010000014.1 tpg gene 21456 21845 . + . ID=gene-ACYKK2_000908;Name=ACYKK2_000908;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000908 DBLQKW010000014.1 Protein Homology CDS 21456 21845 . + 0 ID=cds-HIH2231570.1;Parent=gene-ACYKK2_000908;Dbxref=NCBI_GP:HIH2231570.1;Name=HIH2231570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002872715.1;locus_tag=ACYKK2_000908;product=YcbK family protein;protein_id=HIH2231570.1;transl_table=11 DBLQKW010000014.1 tpg gene 21856 22197 . + . ID=gene-ACYKK2_000909;Name=ACYKK2_000909;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000909 DBLQKW010000014.1 GeneMarkS-2+ CDS 21856 22197 . + 0 ID=cds-HIH2231571.1;Parent=gene-ACYKK2_000909;Dbxref=NCBI_GP:HIH2231571.1;Name=HIH2231571.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_000909;product=hypothetical protein;protein_id=HIH2231571.1;transl_table=11 DBLQKW010000014.1 tpg gene 22194 22442 . + . ID=gene-ACYKK2_000910;Name=ACYKK2_000910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000910 DBLQKW010000014.1 Protein Homology CDS 22194 22442 . + 0 ID=cds-HIH2231572.1;Parent=gene-ACYKK2_000910;Dbxref=NCBI_GP:HIH2231572.1;Name=HIH2231572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002790263.1;locus_tag=ACYKK2_000910;product=hypothetical protein;protein_id=HIH2231572.1;transl_table=11 DBLQKW010000014.1 tpg gene 22429 22551 . + . ID=gene-ACYKK2_000911;Name=ACYKK2_000911;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000911 DBLQKW010000014.1 Protein Homology CDS 22429 22551 . + 0 ID=cds-HIH2231573.1;Parent=gene-ACYKK2_000911;Dbxref=NCBI_GP:HIH2231573.1;Name=HIH2231573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002790262.1;locus_tag=ACYKK2_000911;product=hypothetical protein;protein_id=HIH2231573.1;transl_table=11 DBLQKW010000014.1 tpg gene 22554 22868 . + . ID=gene-ACYKK2_000912;Name=ACYKK2_000912;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000912 DBLQKW010000014.1 Protein Homology CDS 22554 22868 . + 0 ID=cds-HIH2231574.1;Parent=gene-ACYKK2_000912;Dbxref=NCBI_GP:HIH2231574.1;Name=HIH2231574.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027409.6;locus_tag=ACYKK2_000912;product=phage holin family protein;protein_id=HIH2231574.1;transl_table=11 DBLQKW010000014.1 tpg gene 22868 23500 . + . ID=gene-ACYKK2_000913;Name=ACYKK2_000913;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000913 DBLQKW010000014.1 Protein Homology CDS 22868 23500 . + 0 ID=cds-HIH2231575.1;Parent=gene-ACYKK2_000913;Dbxref=NCBI_GP:HIH2231575.1;Name=HIH2231575.1;Ontology_term=GO:0098003,GO:0046872,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_function=metal ion binding|0046872||IEA;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019108984.1;locus_tag=ACYKK2_000913;product=phage baseplate assembly protein V;protein_id=HIH2231575.1;transl_table=11 DBLQKW010000014.1 tpg gene 23509 23700 . + . ID=gene-ACYKK2_000914;Name=ACYKK2_000914;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000914 DBLQKW010000014.1 GeneMarkS-2+ CDS 23509 23700 . + 0 ID=cds-HIH2231576.1;Parent=gene-ACYKK2_000914;Dbxref=NCBI_GP:HIH2231576.1;Name=HIH2231576.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_000914;product=hypothetical protein;protein_id=HIH2231576.1;transl_table=11 DBLQKW010000014.1 tpg gene 23697 23987 . + . ID=gene-ACYKK2_000915;Name=ACYKK2_000915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000915 DBLQKW010000014.1 Protein Homology CDS 23697 23987 . + 0 ID=cds-HIH2231577.1;Parent=gene-ACYKK2_000915;Dbxref=NCBI_GP:HIH2231577.1;Name=HIH2231577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002784483.1;locus_tag=ACYKK2_000915;product=GPW/gp25 family protein;protein_id=HIH2231577.1;transl_table=11 DBLQKW010000014.1 tpg gene 23984 25150 . + . ID=gene-ACYKK2_000916;Name=ACYKK2_000916;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000916 DBLQKW010000014.1 Protein Homology CDS 23984 25150 . + 0 ID=cds-HIH2231578.1;Parent=gene-ACYKK2_000916;Dbxref=NCBI_GP:HIH2231578.1;Name=HIH2231578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009650649.1;locus_tag=ACYKK2_000916;product=baseplate J/gp47 family protein;protein_id=HIH2231578.1;transl_table=11 DBLQKW010000014.1 tpg gene 25248 25868 . + . ID=gene-ACYKK2_000917;Name=ACYKK2_000917;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000917 DBLQKW010000014.1 Protein Homology CDS 25248 25868 . + 0 ID=cds-HIH2231579.1;Parent=gene-ACYKK2_000917;Dbxref=NCBI_GP:HIH2231579.1;Name=HIH2231579.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: protein motif:HMM:NF021220.6;locus_tag=ACYKK2_000917;product=phage tail protein I;protein_id=HIH2231579.1;transl_table=11 DBLQKW010000014.1 tpg gene 25868 26947 . + . ID=gene-ACYKK2_000918;Name=ACYKK2_000918;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000918 DBLQKW010000014.1 Protein Homology CDS 25868 26947 . + 0 ID=cds-HIH2231580.1;Parent=gene-ACYKK2_000918;Dbxref=NCBI_GP:HIH2231580.1;Name=HIH2231580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002872717.1;locus_tag=ACYKK2_000918;product=phage tail protein;protein_id=HIH2231580.1;transl_table=11 DBLQKW010000014.1 tpg gene 26957 27463 . + . ID=gene-ACYKK2_000919;Name=ACYKK2_000919;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000919 DBLQKW010000014.1 Protein Homology CDS 26957 27463 . + 0 ID=cds-HIH2231581.1;Parent=gene-ACYKK2_000919;Dbxref=NCBI_GP:HIH2231581.1;Name=HIH2231581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002922148.1;locus_tag=ACYKK2_000919;product=DUF4376 domain-containing protein;protein_id=HIH2231581.1;transl_table=11 DBLQKW010000014.1 tpg gene 27460 27831 . + . ID=gene-ACYKK2_000920;Name=ACYKK2_000920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000920 DBLQKW010000014.1 Protein Homology CDS 27460 27831 . + 0 ID=cds-HIH2231582.1;Parent=gene-ACYKK2_000920;Dbxref=NCBI_GP:HIH2231582.1;Name=HIH2231582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002922150.1;locus_tag=ACYKK2_000920;product=DUF1353 domain-containing protein;protein_id=HIH2231582.1;transl_table=11 DBLQKW010000014.1 tpg gene 27931 28956 . + . ID=gene-ACYKK2_000921;Name=ACYKK2_000921;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000921 DBLQKW010000014.1 Protein Homology CDS 27931 28956 . + 0 ID=cds-HIH2231583.1;Parent=gene-ACYKK2_000921;Dbxref=NCBI_GP:HIH2231583.1;Name=HIH2231583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935519.1;locus_tag=ACYKK2_000921;product=hypothetical protein;protein_id=HIH2231583.1;transl_table=11 DBLQKW010000014.1 tpg gene 28956 30149 . + . ID=gene-ACYKK2_000922;Name=ACYKK2_000922;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000922 DBLQKW010000014.1 Protein Homology CDS 28956 30149 . + 0 ID=cds-HIH2231584.1;Parent=gene-ACYKK2_000922;Dbxref=NCBI_GP:HIH2231584.1;Name=HIH2231584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002922156.1;locus_tag=ACYKK2_000922;product=phage tail sheath family protein;protein_id=HIH2231584.1;transl_table=11 DBLQKW010000014.1 tpg gene 30176 30685 . + . ID=gene-ACYKK2_000923;Name=ACYKK2_000923;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000923 DBLQKW010000014.1 Protein Homology CDS 30176 30685 . + 0 ID=cds-HIH2231585.1;Parent=gene-ACYKK2_000923;Dbxref=NCBI_GP:HIH2231585.1;Name=HIH2231585.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016846.6;locus_tag=ACYKK2_000923;product=phage major tail tube protein;protein_id=HIH2231585.1;transl_table=11 DBLQKW010000014.1 tpg gene 30838 31077 . + . ID=gene-ACYKK2_000924;Name=ACYKK2_000924;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000924 DBLQKW010000014.1 Protein Homology CDS 30838 31077 . + 0 ID=cds-HIH2231586.1;Parent=gene-ACYKK2_000924;Dbxref=NCBI_GP:HIH2231586.1;Name=HIH2231586.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002784656.1;locus_tag=ACYKK2_000924;product=phage tail assembly protein;protein_id=HIH2231586.1;transl_table=11 DBLQKW010000014.1 tpg gene 31189 31494 . - . ID=gene-ACYKK2_000925;Name=ACYKK2_000925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000925 DBLQKW010000014.1 GeneMarkS-2+ CDS 31189 31494 . - 0 ID=cds-HIH2231587.1;Parent=gene-ACYKK2_000925;Dbxref=NCBI_GP:HIH2231587.1;Name=HIH2231587.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_000925;product=hypothetical protein;protein_id=HIH2231587.1;transl_table=11 DBLQKW010000014.1 tpg gene 31536 33752 . + . ID=gene-ACYKK2_000926;Name=ACYKK2_000926;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000926 DBLQKW010000014.1 Protein Homology CDS 31536 33752 . + 0 ID=cds-HIH2231588.1;Parent=gene-ACYKK2_000926;Dbxref=NCBI_GP:HIH2231588.1;Name=HIH2231588.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002834658.1;locus_tag=ACYKK2_000926;product=phage tail tape measure protein;protein_id=HIH2231588.1;transl_table=11 DBLQKW010000014.1 tpg gene 33756 34238 . + . ID=gene-ACYKK2_000927;Name=ACYKK2_000927;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000927 DBLQKW010000014.1 Protein Homology CDS 33756 34238 . + 0 ID=cds-HIH2231589.1;Parent=gene-ACYKK2_000927;Dbxref=NCBI_GP:HIH2231589.1;Name=HIH2231589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011049622.1;locus_tag=ACYKK2_000927;product=phage virion morphogenesis protein;protein_id=HIH2231589.1;transl_table=11 DBLQKW010000014.1 tpg gene 34447 35262 . + . ID=gene-ACYKK2_000928;Name=ACYKK2_000928;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000928 DBLQKW010000014.1 Protein Homology CDS 34447 35262 . + 0 ID=cds-HIH2231590.1;Parent=gene-ACYKK2_000928;Dbxref=NCBI_GP:HIH2231590.1;Name=HIH2231590.1;Ontology_term=GO:0032775,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004297138.1;locus_tag=ACYKK2_000928;product=DNA adenine methylase;protein_id=HIH2231590.1;transl_table=11 DBLQKW010000014.1 tpg gene 35290 35577 . - . ID=gene-ACYKK2_000929;Name=ACYKK2_000929;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000929 DBLQKW010000014.1 Protein Homology CDS 35290 35577 . - 0 ID=cds-HIH2231591.1;Parent=gene-ACYKK2_000929;Dbxref=NCBI_GP:HIH2231591.1;Name=HIH2231591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019109140.1;locus_tag=ACYKK2_000929;product=hypothetical protein;protein_id=HIH2231591.1;transl_table=11 DBLQKW010000014.1 tpg gene 35657 35851 . - . ID=gene-ACYKK2_000930;Name=ACYKK2_000930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000930 DBLQKW010000014.1 Protein Homology CDS 35657 35851 . - 0 ID=cds-HIH2231592.1;Parent=gene-ACYKK2_000930;Dbxref=NCBI_GP:HIH2231592.1;Name=HIH2231592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002784648.1;locus_tag=ACYKK2_000930;product=hypothetical protein;protein_id=HIH2231592.1;transl_table=11 DBLQKW010000014.1 tpg gene 35861 36181 . - . ID=gene-ACYKK2_000931;Name=ACYKK2_000931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000931 DBLQKW010000014.1 GeneMarkS-2+ CDS 35861 36181 . - 0 ID=cds-HIH2231593.1;Parent=gene-ACYKK2_000931;Dbxref=NCBI_GP:HIH2231593.1;Name=HIH2231593.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_000931;product=hypothetical protein;protein_id=HIH2231593.1;transl_table=11 DBLQKW010000014.1 tpg gene 36262 36891 . - . ID=gene-ACYKK2_000932;Name=ACYKK2_000932;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000932 DBLQKW010000014.1 Protein Homology CDS 36262 36891 . - 0 ID=cds-HIH2231594.1;Parent=gene-ACYKK2_000932;Dbxref=NCBI_GP:HIH2231594.1;Name=HIH2231594.1;Ontology_term=GO:0006282,GO:0006355,GO:0003677,GO:0003700,GO:0004252;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002878902.1;locus_tag=ACYKK2_000932;product=LexA family transcriptional regulator;protein_id=HIH2231594.1;transl_table=11 DBLQKW010000014.1 tpg gene 37185 37385 . + . ID=gene-ACYKK2_000933;Name=ACYKK2_000933;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000933 DBLQKW010000014.1 Protein Homology CDS 37185 37385 . + 0 ID=cds-HIH2231595.1;Parent=gene-ACYKK2_000933;Dbxref=NCBI_GP:HIH2231595.1;Name=HIH2231595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002865152.1;locus_tag=ACYKK2_000933;product=hypothetical protein;protein_id=HIH2231595.1;transl_table=11 ##sequence-region DBLQKW010000015.1 1 33133 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000015.1 tpg region 1 33133 . + . ID=DBLQKW010000015.1:1..33133;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000015.1 tpg gene 66 380 . + . ID=gene-ACYKK2_000934;Name=ACYKK2_000934;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000934 DBLQKW010000015.1 Protein Homology CDS 66 380 . + 0 ID=cds-HIH2231596.1;Parent=gene-ACYKK2_000934;Dbxref=NCBI_GP:HIH2231596.1;Name=HIH2231596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344772.1;locus_tag=ACYKK2_000934;product=DUF2325 domain-containing protein;protein_id=HIH2231596.1;transl_table=11 DBLQKW010000015.1 tpg gene 383 1078 . + . ID=gene-ACYKK2_000935;Name=ACYKK2_000935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000935 DBLQKW010000015.1 Protein Homology CDS 383 1078 . + 0 ID=cds-HIH2231597.1;Parent=gene-ACYKK2_000935;Dbxref=NCBI_GP:HIH2231597.1;Name=HIH2231597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344771.1;locus_tag=ACYKK2_000935;product=hypothetical protein;protein_id=HIH2231597.1;transl_table=11 DBLQKW010000015.1 tpg gene 1078 1569 . + . ID=gene-ACYKK2_000936;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=ACYKK2_000936 DBLQKW010000015.1 Protein Homology CDS 1078 1569 . + 0 ID=cds-HIH2231598.1;Parent=gene-ACYKK2_000936;Dbxref=NCBI_GP:HIH2231598.1;Name=HIH2231598.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344770.1;locus_tag=ACYKK2_000936;product=flavodoxin FldA;protein_id=HIH2231598.1;transl_table=11 DBLQKW010000015.1 tpg pseudogene 1614 2146 . - . ID=gene-ACYKK2_000937;Name=ACYKK2_000937;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_000937;pseudo=true DBLQKW010000015.1 Protein Homology CDS 1614 2146 . - 0 ID=cds-ACYKK2_000937;Parent=gene-ACYKK2_000937;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344769.1;locus_tag=ACYKK2_000937;product=hypothetical protein;pseudo=true;transl_table=11 DBLQKW010000015.1 tpg gene 2152 2862 . - . ID=gene-ACYKK2_000938;Name=ACYKK2_000938;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000938 DBLQKW010000015.1 Protein Homology CDS 2152 2862 . - 0 ID=cds-HIH2231599.1;Parent=gene-ACYKK2_000938;Dbxref=NCBI_GP:HIH2231599.1;Name=HIH2231599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344768.1;locus_tag=ACYKK2_000938;product=thioredoxin fold domain-containing protein;protein_id=HIH2231599.1;transl_table=11 DBLQKW010000015.1 tpg gene 2911 4716 . - . ID=gene-ACYKK2_000939;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=ACYKK2_000939 DBLQKW010000015.1 Protein Homology CDS 2911 4716 . - 0 ID=cds-HIH2231600.1;Parent=gene-ACYKK2_000939;Dbxref=NCBI_GP:HIH2231600.1;Name=HIH2231600.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344767.1;locus_tag=ACYKK2_000939;product=selenocysteine-specific translation elongation factor;protein_id=HIH2231600.1;transl_table=11 DBLQKW010000015.1 tpg gene 4713 6035 . - . ID=gene-ACYKK2_000940;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=ACYKK2_000940 DBLQKW010000015.1 Protein Homology CDS 4713 6035 . - 0 ID=cds-HIH2231601.1;Parent=gene-ACYKK2_000940;Dbxref=NCBI_GP:HIH2231601.1;Name=HIH2231601.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344766.1;locus_tag=ACYKK2_000940;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=HIH2231601.1;transl_table=11 DBLQKW010000015.1 tpg gene 6113 7786 . + . ID=gene-ACYKK2_000941;Name=ACYKK2_000941;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000941 DBLQKW010000015.1 Protein Homology CDS 6113 7786 . + 0 ID=cds-HIH2231602.1;Parent=gene-ACYKK2_000941;Dbxref=NCBI_GP:HIH2231602.1;Name=HIH2231602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002902449.1;locus_tag=ACYKK2_000941;product=ATP-binding protein;protein_id=HIH2231602.1;transl_table=11 DBLQKW010000015.1 tpg gene 7789 9090 . - . ID=gene-ACYKK2_000942;Name=ACYKK2_000942;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000942 DBLQKW010000015.1 Protein Homology CDS 7789 9090 . - 0 ID=cds-HIH2231603.1;Parent=gene-ACYKK2_000942;Dbxref=NCBI_GP:HIH2231603.1;Name=HIH2231603.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002870629.1;locus_tag=ACYKK2_000942;product=MFS transporter;protein_id=HIH2231603.1;transl_table=11 DBLQKW010000015.1 tpg gene 9257 9859 . + . ID=gene-ACYKK2_000943;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=ACYKK2_000943 DBLQKW010000015.1 Protein Homology CDS 9257 9859 . + 0 ID=cds-HIH2231604.1;Parent=gene-ACYKK2_000943;Dbxref=NCBI_GP:HIH2231604.1;Name=HIH2231604.1;Ontology_term=GO:0006281,GO:0035870,GO:0036222;gbkey=CDS;gene=rdgB;go_function=dITP diphosphatase activity|0035870||IEA,XTP diphosphatase activity|0036222||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344762.1;locus_tag=ACYKK2_000943;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=HIH2231604.1;transl_table=11 DBLQKW010000015.1 tpg gene 9890 12361 . - . ID=gene-ACYKK2_000944;Name=ACYKK2_000944;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000944 DBLQKW010000015.1 Protein Homology CDS 9890 12361 . - 0 ID=cds-HIH2231605.1;Parent=gene-ACYKK2_000944;Dbxref=NCBI_GP:HIH2231605.1;Name=HIH2231605.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344761.1;locus_tag=ACYKK2_000944;product=efflux RND transporter permease subunit;protein_id=HIH2231605.1;transl_table=11 DBLQKW010000015.1 tpg gene 12361 12930 . - . ID=gene-ACYKK2_000945;Name=ACYKK2_000945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000945 DBLQKW010000015.1 Protein Homology CDS 12361 12930 . - 0 ID=cds-HIH2231606.1;Parent=gene-ACYKK2_000945;Dbxref=NCBI_GP:HIH2231606.1;Name=HIH2231606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344760.1;locus_tag=ACYKK2_000945;product=ABC transporter substrate-binding protein;protein_id=HIH2231606.1;transl_table=11 DBLQKW010000015.1 tpg gene 12940 13638 . - . ID=gene-ACYKK2_000946;Name=ACYKK2_000946;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000946 DBLQKW010000015.1 Protein Homology CDS 12940 13638 . - 0 ID=cds-HIH2231607.1;Parent=gene-ACYKK2_000946;Dbxref=NCBI_GP:HIH2231607.1;Name=HIH2231607.1;Ontology_term=GO:0120010,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=intermembrane phospholipid transfer|0120010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344759.1;locus_tag=ACYKK2_000946;product=MlaA family lipoprotein;protein_id=HIH2231607.1;transl_table=11 DBLQKW010000015.1 tpg gene 13683 14126 . - . ID=gene-ACYKK2_000947;Name=ACYKK2_000947;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000947 DBLQKW010000015.1 Protein Homology CDS 13683 14126 . - 0 ID=cds-HIH2231608.1;Parent=gene-ACYKK2_000947;Dbxref=NCBI_GP:HIH2231608.1;Name=HIH2231608.1;Ontology_term=GO:0006144,GO:0106130;gbkey=CDS;go_function=purine phosphoribosyltransferase activity|0106130||IEA;go_process=purine nucleobase metabolic process|0006144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344758.1;locus_tag=ACYKK2_000947;product=phosphoribosyltransferase;protein_id=HIH2231608.1;transl_table=11 DBLQKW010000015.1 tpg gene 14140 15459 . - . ID=gene-ACYKK2_000948;Name=ACYKK2_000948;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000948 DBLQKW010000015.1 Protein Homology CDS 14140 15459 . - 0 ID=cds-HIH2231609.1;Parent=gene-ACYKK2_000948;Dbxref=NCBI_GP:HIH2231609.1;Name=HIH2231609.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344757.1;locus_tag=ACYKK2_000948;product=NCS2 family permease;protein_id=HIH2231609.1;transl_table=11 DBLQKW010000015.1 tpg gene 15469 16533 . - . ID=gene-ACYKK2_000949;Name=mqnE;gbkey=Gene;gene=mqnE;gene_biotype=protein_coding;locus_tag=ACYKK2_000949 DBLQKW010000015.1 Protein Homology CDS 15469 16533 . - 0 ID=cds-HIH2231610.1;Parent=gene-ACYKK2_000949;Dbxref=NCBI_GP:HIH2231610.1;Name=HIH2231610.1;Ontology_term=GO:0009234,GO:0016765,GO:0051536;gbkey=CDS;gene=mqnE;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344756.1;locus_tag=ACYKK2_000949;product=aminofutalosine synthase MqnE;protein_id=HIH2231610.1;transl_table=11 DBLQKW010000015.1 tpg gene 16677 19025 . + . ID=gene-ACYKK2_000950;Name=ACYKK2_000950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000950 DBLQKW010000015.1 Protein Homology CDS 16677 19025 . + 0 ID=cds-HIH2231611.1;Parent=gene-ACYKK2_000950;Dbxref=NCBI_GP:HIH2231611.1;Name=HIH2231611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344755.1;locus_tag=ACYKK2_000950;product=nucleotidyltransferase;protein_id=HIH2231611.1;transl_table=11 DBLQKW010000015.1 tpg gene 19030 20826 . + . ID=gene-ACYKK2_000951;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=ACYKK2_000951 DBLQKW010000015.1 Protein Homology CDS 19030 20826 . + 0 ID=cds-HIH2231612.1;Parent=gene-ACYKK2_000951;Dbxref=NCBI_GP:HIH2231612.1;Name=HIH2231612.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344754.1;locus_tag=ACYKK2_000951;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=HIH2231612.1;transl_table=11 DBLQKW010000015.1 tpg gene 20829 23954 . + . ID=gene-ACYKK2_000952;Name=ACYKK2_000952;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000952 DBLQKW010000015.1 Protein Homology CDS 20829 23954 . + 0 ID=cds-HIH2231613.1;Parent=gene-ACYKK2_000952;Dbxref=NCBI_GP:HIH2231613.1;Name=HIH2231613.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344753.1;locus_tag=ACYKK2_000952;product=S8 family serine peptidase;protein_id=HIH2231613.1;transl_table=11 DBLQKW010000015.1 tpg gene 24010 25401 . + . ID=gene-ACYKK2_000953;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=ACYKK2_000953 DBLQKW010000015.1 Protein Homology CDS 24010 25401 . + 0 ID=cds-HIH2231614.1;Parent=gene-ACYKK2_000953;Dbxref=NCBI_GP:HIH2231614.1;Name=HIH2231614.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344752.1;locus_tag=ACYKK2_000953;product=class II fumarate hydratase;protein_id=HIH2231614.1;transl_table=11 DBLQKW010000015.1 tpg gene 25431 26474 . - . ID=gene-ACYKK2_000954;Name=amaA;gbkey=Gene;gene=amaA;gene_biotype=protein_coding;locus_tag=ACYKK2_000954 DBLQKW010000015.1 Protein Homology CDS 25431 26474 . - 0 ID=cds-HIH2231615.1;Parent=gene-ACYKK2_000954;Dbxref=NCBI_GP:HIH2231615.1;Name=HIH2231615.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;gene=amaA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344751.1;locus_tag=ACYKK2_000954;product=AI-2E family transporter;protein_id=HIH2231615.1;transl_table=11 DBLQKW010000015.1 tpg gene 26478 27485 . - . ID=gene-ACYKK2_000955;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=ACYKK2_000955 DBLQKW010000015.1 Protein Homology CDS 26478 27485 . - 0 ID=cds-HIH2231616.1;Parent=gene-ACYKK2_000955;Dbxref=NCBI_GP:HIH2231616.1;Name=HIH2231616.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344750.1;locus_tag=ACYKK2_000955;product=Holliday junction branch migration DNA helicase RuvB;protein_id=HIH2231616.1;transl_table=11 DBLQKW010000015.1 tpg gene 27576 27986 . + . ID=gene-ACYKK2_000956;Name=ACYKK2_000956;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000956 DBLQKW010000015.1 Protein Homology CDS 27576 27986 . + 0 ID=cds-HIH2231617.1;Parent=gene-ACYKK2_000956;Dbxref=NCBI_GP:HIH2231617.1;Name=HIH2231617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002820028.1;locus_tag=ACYKK2_000956;product=histidine phosphotransferase;protein_id=HIH2231617.1;transl_table=11 DBLQKW010000015.1 tpg gene 27987 28345 . + . ID=gene-ACYKK2_000957;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=ACYKK2_000957 DBLQKW010000015.1 cmsearch tmRNA 27987 28345 . + . ID=rna-ACYKK2_000957;Parent=gene-ACYKK2_000957;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKK2_000957;product=transfer-messenger RNA DBLQKW010000015.1 cmsearch exon 27987 28345 . + . ID=exon-ACYKK2_000957-1;Parent=rna-ACYKK2_000957;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKK2_000957;product=transfer-messenger RNA DBLQKW010000015.1 tpg pseudogene 28551 30823 . + . ID=gene-ACYKK2_000958;Name=ACYKK2_000958;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_000958;pseudo=true DBLQKW010000015.1 Protein Homology CDS 28551 30823 . + 0 ID=cds-ACYKK2_000958;Parent=gene-ACYKK2_000958;Note=frameshifted%3B internal stop;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002821824.1;locus_tag=ACYKK2_000958;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;transl_table=11 DBLQKW010000015.1 tpg gene 30966 33050 . - . ID=gene-ACYKK2_000959;Name=ppk;gbkey=Gene;gene=ppk;gene_biotype=protein_coding;locus_tag=ACYKK2_000959 DBLQKW010000015.1 Protein Homology CDS 30966 33050 . - 0 ID=cds-HIH2231618.1;Parent=gene-ACYKK2_000959;Dbxref=NCBI_GP:HIH2231618.1;Name=HIH2231618.1;gbkey=CDS;gene=ppk;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344747.1;locus_tag=ACYKK2_000959;product=RNA degradosome polyphosphate kinase;protein_id=HIH2231618.1;transl_table=11 ##sequence-region DBLQKW010000016.1 1 30480 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000016.1 tpg region 1 30480 . + . ID=DBLQKW010000016.1:1..30480;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000016.1 tpg gene 45 455 . + . ID=gene-ACYKK2_000960;Name=ACYKK2_000960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000960 DBLQKW010000016.1 Protein Homology CDS 45 455 . + 0 ID=cds-HIH2231619.1;Parent=gene-ACYKK2_000960;Dbxref=NCBI_GP:HIH2231619.1;Name=HIH2231619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002865665.1;locus_tag=ACYKK2_000960;product=amino acid transporter;protein_id=HIH2231619.1;transl_table=11 DBLQKW010000016.1 tpg gene 464 604 . + . ID=gene-ACYKK2_000961;Name=ACYKK2_000961;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000961 DBLQKW010000016.1 Protein Homology CDS 464 604 . + 0 ID=cds-HIH2231620.1;Parent=gene-ACYKK2_000961;Dbxref=NCBI_GP:HIH2231620.1;Name=HIH2231620.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013050.6;locus_tag=ACYKK2_000961;product=hypothetical protein;protein_id=HIH2231620.1;transl_table=11 DBLQKW010000016.1 tpg gene 616 816 . + . ID=gene-ACYKK2_000962;Name=ACYKK2_000962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000962 DBLQKW010000016.1 Protein Homology CDS 616 816 . + 0 ID=cds-HIH2231621.1;Parent=gene-ACYKK2_000962;Dbxref=NCBI_GP:HIH2231621.1;Name=HIH2231621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014517209.1;locus_tag=ACYKK2_000962;product=di-/tripeptide transporter domain protein;protein_id=HIH2231621.1;transl_table=11 DBLQKW010000016.1 tpg pseudogene 855 1534 . + . ID=gene-ACYKK2_000963;Name=ACYKK2_000963;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_000963;pseudo=true DBLQKW010000016.1 Protein Homology CDS 855 1534 . + 0 ID=cds-ACYKK2_000963;Parent=gene-ACYKK2_000963;Note=frameshifted;Ontology_term=GO:0015833,GO:0015333,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=peptide:proton symporter activity|0015333||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: protein motif:HMM:NF013050.6;locus_tag=ACYKK2_000963;product=oligopeptide:H+ symporter;pseudo=true;transl_table=11 DBLQKW010000016.1 tpg gene 1734 3287 . + . ID=gene-ACYKK2_000964;Name=ACYKK2_000964;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000964 DBLQKW010000016.1 Protein Homology CDS 1734 3287 . + 0 ID=cds-HIH2231622.1;Parent=gene-ACYKK2_000964;Dbxref=NCBI_GP:HIH2231622.1;Name=HIH2231622.1;Ontology_term=GO:0015833,GO:0055085,GO:0022857,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010790832.1;locus_tag=ACYKK2_000964;product=peptide MFS transporter;protein_id=HIH2231622.1;transl_table=11 DBLQKW010000016.1 tpg gene 3303 5093 . + . ID=gene-ACYKK2_000965;Name=ACYKK2_000965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000965 DBLQKW010000016.1 Protein Homology CDS 3303 5093 . + 0 ID=cds-HIH2231623.1;Parent=gene-ACYKK2_000965;Dbxref=NCBI_GP:HIH2231623.1;Name=HIH2231623.1;Ontology_term=GO:0006508,GO:0004177,GO:0046872,GO:0070006,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aminopeptidase activity|0004177||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344082.1;locus_tag=ACYKK2_000965;product=aminopeptidase P family protein;protein_id=HIH2231623.1;transl_table=11 DBLQKW010000016.1 tpg gene 5214 7019 . - . ID=gene-ACYKK2_000966;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=ACYKK2_000966 DBLQKW010000016.1 Protein Homology CDS 5214 7019 . - 0 ID=cds-HIH2231624.1;Parent=gene-ACYKK2_000966;Dbxref=NCBI_GP:HIH2231624.1;Name=HIH2231624.1;Ontology_term=GO:0009252,GO:0003824,GO:0008658,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=catalytic activity|0003824||IEA,penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344081.1;locus_tag=ACYKK2_000966;product=penicillin-binding protein 2;protein_id=HIH2231624.1;transl_table=11 DBLQKW010000016.1 tpg gene 7020 7514 . - . ID=gene-ACYKK2_000967;Name=ACYKK2_000967;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000967 DBLQKW010000016.1 Protein Homology CDS 7020 7514 . - 0 ID=cds-HIH2231625.1;Parent=gene-ACYKK2_000967;Dbxref=NCBI_GP:HIH2231625.1;Name=HIH2231625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344080.1;locus_tag=ACYKK2_000967;product=hypothetical protein;protein_id=HIH2231625.1;transl_table=11 DBLQKW010000016.1 tpg gene 7511 8107 . - . ID=gene-ACYKK2_000968;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=ACYKK2_000968 DBLQKW010000016.1 Protein Homology CDS 7511 8107 . - 0 ID=cds-HIH2231626.1;Parent=gene-ACYKK2_000968;Dbxref=NCBI_GP:HIH2231626.1;Name=HIH2231626.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344079.1;locus_tag=ACYKK2_000968;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=HIH2231626.1;transl_table=11 DBLQKW010000016.1 tpg gene 8104 8565 . - . ID=gene-ACYKK2_000969;Name=ACYKK2_000969;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000969 DBLQKW010000016.1 Protein Homology CDS 8104 8565 . - 0 ID=cds-HIH2231627.1;Parent=gene-ACYKK2_000969;Dbxref=NCBI_GP:HIH2231627.1;Name=HIH2231627.1;Ontology_term=GO:0015920,GO:0001530,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=lipopolysaccharide binding|0001530||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344078.1;locus_tag=ACYKK2_000969;product=LptA/OstA family protein;protein_id=HIH2231627.1;transl_table=11 DBLQKW010000016.1 tpg gene 8547 9062 . - . ID=gene-ACYKK2_000970;Name=ACYKK2_000970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000970 DBLQKW010000016.1 Protein Homology CDS 8547 9062 . - 0 ID=cds-HIH2231628.1;Parent=gene-ACYKK2_000970;Dbxref=NCBI_GP:HIH2231628.1;Name=HIH2231628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344077.1;locus_tag=ACYKK2_000970;product=hypothetical protein;protein_id=HIH2231628.1;transl_table=11 DBLQKW010000016.1 tpg gene 9053 9541 . - . ID=gene-ACYKK2_000971;Name=ACYKK2_000971;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000971 DBLQKW010000016.1 Protein Homology CDS 9053 9541 . - 0 ID=cds-HIH2231629.1;Parent=gene-ACYKK2_000971;Dbxref=NCBI_GP:HIH2231629.1;Name=HIH2231629.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344076.1;locus_tag=ACYKK2_000971;product=HAD-IIIA family hydrolase;protein_id=HIH2231629.1;transl_table=11 DBLQKW010000016.1 tpg gene 9547 10374 . - . ID=gene-ACYKK2_000972;Name=ACYKK2_000972;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000972 DBLQKW010000016.1 Protein Homology CDS 9547 10374 . - 0 ID=cds-HIH2231630.1;Parent=gene-ACYKK2_000972;Dbxref=NCBI_GP:HIH2231630.1;Name=HIH2231630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344075.1;locus_tag=ACYKK2_000972;product=septal ring lytic transglycosylase RlpA family protein;protein_id=HIH2231630.1;transl_table=11 DBLQKW010000016.1 tpg gene 10334 11452 . - . ID=gene-ACYKK2_000973;Name=ACYKK2_000973;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000973 DBLQKW010000016.1 Protein Homology CDS 10334 11452 . - 0 ID=cds-HIH2231631.1;Parent=gene-ACYKK2_000973;Dbxref=NCBI_GP:HIH2231631.1;Name=HIH2231631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344074.1;locus_tag=ACYKK2_000973;product=transglycosylase SLT domain-containing protein;protein_id=HIH2231631.1;transl_table=11 DBLQKW010000016.1 tpg gene 11452 12267 . - . ID=gene-ACYKK2_000974;Name=ACYKK2_000974;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000974 DBLQKW010000016.1 Protein Homology CDS 11452 12267 . - 0 ID=cds-HIH2231632.1;Parent=gene-ACYKK2_000974;Dbxref=NCBI_GP:HIH2231632.1;Name=HIH2231632.1;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344073.1;locus_tag=ACYKK2_000974;product=TatD family hydrolase;protein_id=HIH2231632.1;transl_table=11 DBLQKW010000016.1 tpg gene 12258 13502 . - . ID=gene-ACYKK2_000975;Name=cbrR;gbkey=Gene;gene=cbrR;gene_biotype=protein_coding;locus_tag=ACYKK2_000975 DBLQKW010000016.1 Protein Homology CDS 12258 13502 . - 0 ID=cds-HIH2231633.1;Parent=gene-ACYKK2_000975;Dbxref=NCBI_GP:HIH2231633.1;Name=HIH2231633.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cbrR;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344072.1;locus_tag=ACYKK2_000975;product=bile resistance response regulator CbrR;protein_id=HIH2231633.1;transl_table=11 DBLQKW010000016.1 tpg gene 13608 15131 . - . ID=gene-ACYKK2_000976;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=ACYKK2_000976 DBLQKW010000016.1 Protein Homology CDS 13608 15131 . - 0 ID=cds-HIH2231634.1;Parent=gene-ACYKK2_000976;Dbxref=NCBI_GP:HIH2231634.1;Name=HIH2231634.1;Ontology_term=GO:0006302,GO:0016887;gbkey=CDS;gene=recN;go_function=ATP hydrolysis activity|0016887||IEA;go_process=double-strand break repair|0006302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344071.1;locus_tag=ACYKK2_000976;product=AAA family ATPase;protein_id=HIH2231634.1;transl_table=11 DBLQKW010000016.1 tpg gene 15131 15991 . - . ID=gene-ACYKK2_000977;Name=ACYKK2_000977;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000977 DBLQKW010000016.1 Protein Homology CDS 15131 15991 . - 0 ID=cds-HIH2231635.1;Parent=gene-ACYKK2_000977;Dbxref=NCBI_GP:HIH2231635.1;Name=HIH2231635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344070.1;locus_tag=ACYKK2_000977;product=NAD(+) kinase;protein_id=HIH2231635.1;transl_table=11 DBLQKW010000016.1 tpg gene 16082 17833 . + . ID=gene-ACYKK2_000978;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=ACYKK2_000978 DBLQKW010000016.1 Protein Homology CDS 16082 17833 . + 0 ID=cds-HIH2231636.1;Parent=gene-ACYKK2_000978;Dbxref=NCBI_GP:HIH2231636.1;Name=HIH2231636.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344069.1;locus_tag=ACYKK2_000978;product=aspartate--tRNA ligase;protein_id=HIH2231636.1;transl_table=11 DBLQKW010000016.1 tpg gene 17830 18408 . + . ID=gene-ACYKK2_000979;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=ACYKK2_000979 DBLQKW010000016.1 Protein Homology CDS 17830 18408 . + 0 ID=cds-HIH2231637.1;Parent=gene-ACYKK2_000979;Dbxref=NCBI_GP:HIH2231637.1;Name=HIH2231637.1;Ontology_term=GO:0006139,GO:0019205;gbkey=CDS;gene=adk;go_function=nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344068.1;locus_tag=ACYKK2_000979;product=adenylate kinase;protein_id=HIH2231637.1;transl_table=11 DBLQKW010000016.1 tpg gene 18418 18936 . + . ID=gene-ACYKK2_000980;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=ACYKK2_000980 DBLQKW010000016.1 Protein Homology CDS 18418 18936 . + 0 ID=cds-HIH2231638.1;Parent=gene-ACYKK2_000980;Dbxref=NCBI_GP:HIH2231638.1;Name=HIH2231638.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344067.1;locus_tag=ACYKK2_000980;product=inorganic diphosphatase;protein_id=HIH2231638.1;transl_table=11 DBLQKW010000016.1 tpg pseudogene 18978 19475 . + . ID=gene-ACYKK2_000981;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=pseudogene;locus_tag=ACYKK2_000981;pseudo=true DBLQKW010000016.1 Protein Homology CDS 18978 19475 . + 0 ID=cds-ACYKK2_000981;Parent=gene-ACYKK2_000981;Note=internal stop;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344066.1;locus_tag=ACYKK2_000981;product=peptide-methionine (S)-S-oxide reductase MsrA;pseudo=true;transl_table=11 DBLQKW010000016.1 tpg gene 19651 20490 . - . ID=gene-ACYKK2_000982;Name=ACYKK2_000982;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000982 DBLQKW010000016.1 Protein Homology CDS 19651 20490 . - 0 ID=cds-HIH2231639.1;Parent=gene-ACYKK2_000982;Dbxref=NCBI_GP:HIH2231639.1;Name=HIH2231639.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344065.1;locus_tag=ACYKK2_000982;product=RsmB/NOP family class I SAM-dependent RNA methyltransferase;protein_id=HIH2231639.1;transl_table=11 DBLQKW010000016.1 tpg gene 20519 20902 . - . ID=gene-ACYKK2_000983;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=ACYKK2_000983 DBLQKW010000016.1 Protein Homology CDS 20519 20902 . - 0 ID=cds-HIH2231640.1;Parent=gene-ACYKK2_000983;Dbxref=NCBI_GP:HIH2231640.1;Name=HIH2231640.1;gbkey=CDS;gene=ruvX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344064.1;locus_tag=ACYKK2_000983;product=Holliday junction resolvase RuvX;protein_id=HIH2231640.1;transl_table=11 DBLQKW010000016.1 tpg gene 20899 21672 . - . ID=gene-ACYKK2_000984;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=ACYKK2_000984 DBLQKW010000016.1 Protein Homology CDS 20899 21672 . - 0 ID=cds-HIH2231641.1;Parent=gene-ACYKK2_000984;Dbxref=NCBI_GP:HIH2231641.1;Name=HIH2231641.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344063.1;locus_tag=ACYKK2_000984;product=DNA-processing protein DprA;protein_id=HIH2231641.1;transl_table=11 DBLQKW010000016.1 tpg gene 21662 22744 . - . ID=gene-ACYKK2_000985;Name=ACYKK2_000985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000985 DBLQKW010000016.1 Protein Homology CDS 21662 22744 . - 0 ID=cds-HIH2231642.1;Parent=gene-ACYKK2_000985;Dbxref=NCBI_GP:HIH2231642.1;Name=HIH2231642.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344062.1;locus_tag=ACYKK2_000985;product=divergent polysaccharide deacetylase family protein;protein_id=HIH2231642.1;transl_table=11 DBLQKW010000016.1 tpg gene 22748 23770 . - . ID=gene-ACYKK2_000986;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=ACYKK2_000986 DBLQKW010000016.1 Protein Homology CDS 22748 23770 . - 0 ID=cds-HIH2231643.1;Parent=gene-ACYKK2_000986;Dbxref=NCBI_GP:HIH2231643.1;Name=HIH2231643.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344061.1;locus_tag=ACYKK2_000986;product=ketol-acid reductoisomerase;protein_id=HIH2231643.1;transl_table=11 DBLQKW010000016.1 tpg gene 23889 25823 . + . ID=gene-ACYKK2_000987;Name=ACYKK2_000987;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000987 DBLQKW010000016.1 Protein Homology CDS 23889 25823 . + 0 ID=cds-HIH2231644.1;Parent=gene-ACYKK2_000987;Dbxref=NCBI_GP:HIH2231644.1;Name=HIH2231644.1;Ontology_term=GO:0003723,GO:0004540;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344060.1;locus_tag=ACYKK2_000987;product=RNB domain-containing ribonuclease;protein_id=HIH2231644.1;transl_table=11 DBLQKW010000016.1 tpg gene 25816 26781 . + . ID=gene-ACYKK2_000988;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=ACYKK2_000988 DBLQKW010000016.1 Protein Homology CDS 25816 26781 . + 0 ID=cds-HIH2231645.1;Parent=gene-ACYKK2_000988;Dbxref=NCBI_GP:HIH2231645.1;Name=HIH2231645.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344059.1;locus_tag=ACYKK2_000988;product=DNA polymerase III subunit delta;protein_id=HIH2231645.1;transl_table=11 DBLQKW010000016.1 tpg pseudogene 27015 30447 . - . ID=gene-ACYKK2_000989;Name=ACYKK2_000989;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_000989;pseudo=true DBLQKW010000016.1 Protein Homology CDS 27015 30447 . - 0 ID=cds-ACYKK2_000989;Parent=gene-ACYKK2_000989;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344058.1;locus_tag=ACYKK2_000989;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;transl_table=11 ##sequence-region DBLQKW010000017.1 1 30214 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000017.1 tpg region 1 30214 . + . ID=DBLQKW010000017.1:1..30214;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000017.1 tpg pseudogene 836 1942 . + . ID=gene-ACYKK2_000990;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=pseudogene;locus_tag=ACYKK2_000990;pseudo=true DBLQKW010000017.1 Protein Homology CDS 836 1942 . + 0 ID=cds-ACYKK2_000990;Parent=gene-ACYKK2_000990;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015740,GO:0015556,GO:0016020;gbkey=CDS;gene=dcuC;go_component=membrane|0016020||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651065.1;locus_tag=ACYKK2_000990;product=C4-dicarboxylate transporter DcuC;pseudo=true;transl_table=11 DBLQKW010000017.1 tpg gene 1954 3117 . + . ID=gene-ACYKK2_000991;Name=ACYKK2_000991;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000991 DBLQKW010000017.1 Protein Homology CDS 1954 3117 . + 0 ID=cds-HIH2231646.1;Parent=gene-ACYKK2_000991;Dbxref=NCBI_GP:HIH2231646.1;Name=HIH2231646.1;Ontology_term=GO:0019346,GO:0016846,GO:0030170;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002866696.1;locus_tag=ACYKK2_000991;product=trans-sulfuration enzyme family protein;protein_id=HIH2231646.1;transl_table=11 DBLQKW010000017.1 tpg gene 3127 4494 . + . ID=gene-ACYKK2_000992;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=ACYKK2_000992 DBLQKW010000017.1 Protein Homology CDS 3127 4494 . + 0 ID=cds-HIH2231647.1;Parent=gene-ACYKK2_000992;Dbxref=NCBI_GP:HIH2231647.1;Name=HIH2231647.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344779.1;locus_tag=ACYKK2_000992;product=adenylosuccinate lyase;protein_id=HIH2231647.1;transl_table=11 DBLQKW010000017.1 tpg pseudogene 4503 5838 . + . ID=gene-ACYKK2_000993;Name=ACYKK2_000993;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_000993;pseudo=true DBLQKW010000017.1 Protein Homology CDS 4503 5838 . + 0 ID=cds-ACYKK2_000993;Parent=gene-ACYKK2_000993;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843169.1;locus_tag=ACYKK2_000993;product=MmgE/PrpD family protein;pseudo=true;transl_table=11 DBLQKW010000017.1 tpg gene 5920 6144 . + . ID=gene-ACYKK2_000994;Name=ACYKK2_000994;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000994 DBLQKW010000017.1 Protein Homology CDS 5920 6144 . + 0 ID=cds-HIH2231648.1;Parent=gene-ACYKK2_000994;Dbxref=NCBI_GP:HIH2231648.1;Name=HIH2231648.1;Ontology_term=GO:0006826,GO:0046914;gbkey=CDS;go_function=transition metal ion binding|0046914||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344780.1;locus_tag=ACYKK2_000994;product=FeoA family protein;protein_id=HIH2231648.1;transl_table=11 DBLQKW010000017.1 tpg gene 6141 7982 . + . ID=gene-ACYKK2_000995;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=ACYKK2_000995 DBLQKW010000017.1 Protein Homology CDS 6141 7982 . + 0 ID=cds-HIH2231649.1;Parent=gene-ACYKK2_000995;Dbxref=NCBI_GP:HIH2231649.1;Name=HIH2231649.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344781.1;locus_tag=ACYKK2_000995;product=ferrous iron transport protein B;protein_id=HIH2231649.1;transl_table=11 DBLQKW010000017.1 tpg gene 7979 9472 . - . ID=gene-ACYKK2_000996;Name=ACYKK2_000996;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_000996 DBLQKW010000017.1 Protein Homology CDS 7979 9472 . - 0 ID=cds-HIH2231650.1;Parent=gene-ACYKK2_000996;Dbxref=NCBI_GP:HIH2231650.1;Name=HIH2231650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344782.1;locus_tag=ACYKK2_000996;product=hydrogenase small subunit;protein_id=HIH2231650.1;transl_table=11 DBLQKW010000017.1 tpg gene 9476 10300 . - . ID=gene-ACYKK2_000997;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=ACYKK2_000997 DBLQKW010000017.1 Protein Homology CDS 9476 10300 . - 0 ID=cds-HIH2231651.1;Parent=gene-ACYKK2_000997;Dbxref=NCBI_GP:HIH2231651.1;Name=HIH2231651.1;Ontology_term=GO:0006633,GO:0004318;gbkey=CDS;gene=fabI;go_function=enoyl-[acyl-carrier-protein] reductase (NADH) activity|0004318||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344783.1;locus_tag=ACYKK2_000997;product=enoyl-ACP reductase FabI;protein_id=HIH2231651.1;transl_table=11 DBLQKW010000017.1 tpg gene 10304 10975 . - . ID=gene-ACYKK2_000998;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=ACYKK2_000998 DBLQKW010000017.1 Protein Homology CDS 10304 10975 . - 0 ID=cds-HIH2231652.1;Parent=gene-ACYKK2_000998;Dbxref=NCBI_GP:HIH2231652.1;Name=HIH2231652.1;gbkey=CDS;gene=tpiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344784.1;locus_tag=ACYKK2_000998;product=triose-phosphate isomerase;protein_id=HIH2231652.1;transl_table=11 DBLQKW010000017.1 tpg gene 10972 12174 . - . ID=gene-ACYKK2_000999;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=ACYKK2_000999 DBLQKW010000017.1 Protein Homology CDS 10972 12174 . - 0 ID=cds-HIH2231653.1;Parent=gene-ACYKK2_000999;Dbxref=NCBI_GP:HIH2231653.1;Name=HIH2231653.1;Ontology_term=GO:0006096,GO:0004618,GO:0005524,GO:0005737;gbkey=CDS;gene=pgk;go_component=cytoplasm|0005737||IEA;go_function=phosphoglycerate kinase activity|0004618||IEA,ATP binding|0005524||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344785.1;locus_tag=ACYKK2_000999;product=phosphoglycerate kinase;protein_id=HIH2231653.1;transl_table=11 DBLQKW010000017.1 tpg gene 12177 13175 . - . ID=gene-ACYKK2_001000;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=ACYKK2_001000 DBLQKW010000017.1 Protein Homology CDS 12177 13175 . - 0 ID=cds-HIH2231654.1;Parent=gene-ACYKK2_001000;Dbxref=NCBI_GP:HIH2231654.1;Name=HIH2231654.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344786.1;locus_tag=ACYKK2_001000;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=HIH2231654.1;transl_table=11 DBLQKW010000017.1 tpg gene 13235 13780 . + . ID=gene-ACYKK2_001001;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=ACYKK2_001001 DBLQKW010000017.1 Protein Homology CDS 13235 13780 . + 0 ID=cds-HIH2231655.1;Parent=gene-ACYKK2_001001;Dbxref=NCBI_GP:HIH2231655.1;Name=HIH2231655.1;Ontology_term=GO:0009435,GO:0000309,GO:0004515,GO:0005737;gbkey=CDS;gene=nadD;go_component=cytoplasm|0005737||IEA;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,nicotinate-nucleotide adenylyltransferase activity|0004515||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344787.1;locus_tag=ACYKK2_001001;product=nicotinate (nicotinamide) nucleotide adenylyltransferase;protein_id=HIH2231655.1;transl_table=11 DBLQKW010000017.1 tpg gene 13808 14134 . + . ID=gene-ACYKK2_001002;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=ACYKK2_001002 DBLQKW010000017.1 Protein Homology CDS 13808 14134 . + 0 ID=cds-HIH2231656.1;Parent=gene-ACYKK2_001002;Dbxref=NCBI_GP:HIH2231656.1;Name=HIH2231656.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344788.1;locus_tag=ACYKK2_001002;product=ribosome silencing factor;protein_id=HIH2231656.1;transl_table=11 DBLQKW010000017.1 tpg gene 14165 14485 . - . ID=gene-ACYKK2_001003;Name=ACYKK2_001003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001003 DBLQKW010000017.1 Protein Homology CDS 14165 14485 . - 0 ID=cds-HIH2231657.1;Parent=gene-ACYKK2_001003;Dbxref=NCBI_GP:HIH2231657.1;Name=HIH2231657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002870609.1;locus_tag=ACYKK2_001003;product=DUF1090 family protein;protein_id=HIH2231657.1;transl_table=11 DBLQKW010000017.1 tpg pseudogene 14532 15921 . - . ID=gene-ACYKK2_001004;Name=pgmL;gbkey=Gene;gene=pgmL;gene_biotype=pseudogene;locus_tag=ACYKK2_001004;pseudo=true DBLQKW010000017.1 Protein Homology CDS 14532 15921 . - 0 ID=cds-ACYKK2_001004;Parent=gene-ACYKK2_001004;Note=frameshifted;gbkey=CDS;gene=pgmL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344790.1;locus_tag=ACYKK2_001004;product=phosphoglucosamine mutase PgmL;pseudo=true;transl_table=11 DBLQKW010000017.1 tpg gene 16025 16561 . + . ID=gene-ACYKK2_001005;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=ACYKK2_001005 DBLQKW010000017.1 Protein Homology CDS 16025 16561 . + 0 ID=cds-HIH2231658.1;Parent=gene-ACYKK2_001005;Dbxref=NCBI_GP:HIH2231658.1;Name=HIH2231658.1;Ontology_term=GO:0006935,GO:0071973;gbkey=CDS;gene=fliL;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344791.1;locus_tag=ACYKK2_001005;product=flagellar basal body-associated protein FliL;protein_id=HIH2231658.1;transl_table=11 DBLQKW010000017.1 tpg gene 16561 16908 . + . ID=gene-ACYKK2_001006;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=ACYKK2_001006 DBLQKW010000017.1 Protein Homology CDS 16561 16908 . + 0 ID=cds-HIH2231659.1;Parent=gene-ACYKK2_001006;Dbxref=NCBI_GP:HIH2231659.1;Name=HIH2231659.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344792.1;locus_tag=ACYKK2_001006;product=holo-ACP synthase;protein_id=HIH2231659.1;transl_table=11 DBLQKW010000017.1 tpg gene 16909 17328 . - . ID=gene-ACYKK2_001007;Name=ACYKK2_001007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001007 DBLQKW010000017.1 Protein Homology CDS 16909 17328 . - 0 ID=cds-HIH2231660.1;Parent=gene-ACYKK2_001007;Dbxref=NCBI_GP:HIH2231660.1;Name=HIH2231660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344793.1;locus_tag=ACYKK2_001007;product=hypothetical protein;protein_id=HIH2231660.1;transl_table=11 DBLQKW010000017.1 tpg gene 17325 18686 . - . ID=gene-ACYKK2_001008;Name=ACYKK2_001008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001008 DBLQKW010000017.1 Protein Homology CDS 17325 18686 . - 0 ID=cds-HIH2231661.1;Parent=gene-ACYKK2_001008;Dbxref=NCBI_GP:HIH2231661.1;Name=HIH2231661.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344794.1;locus_tag=ACYKK2_001008;product=cytochrome P450;protein_id=HIH2231661.1;transl_table=11 DBLQKW010000017.1 tpg gene 18683 19804 . - . ID=gene-ACYKK2_001009;Name=ACYKK2_001009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001009 DBLQKW010000017.1 Protein Homology CDS 18683 19804 . - 0 ID=cds-HIH2231662.1;Parent=gene-ACYKK2_001009;Dbxref=NCBI_GP:HIH2231662.1;Name=HIH2231662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344795.1;locus_tag=ACYKK2_001009;product=DUF829 domain-containing protein;protein_id=HIH2231662.1;transl_table=11 DBLQKW010000017.1 tpg gene 19877 21061 . - . ID=gene-ACYKK2_001010;Name=kpsS;gbkey=Gene;gene=kpsS;gene_biotype=protein_coding;locus_tag=ACYKK2_001010 DBLQKW010000017.1 Protein Homology CDS 19877 21061 . - 0 ID=cds-HIH2231663.1;Parent=gene-ACYKK2_001010;Dbxref=NCBI_GP:HIH2231663.1;Name=HIH2231663.1;Ontology_term=GO:0000271;gbkey=CDS;gene=kpsS;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344796.1;locus_tag=ACYKK2_001010;product=capsule polysaccharide modification protein KpsS;protein_id=HIH2231663.1;transl_table=11 DBLQKW010000017.1 tpg gene 21058 23127 . - . ID=gene-ACYKK2_001011;Name=kpsC;gbkey=Gene;gene=kpsC;gene_biotype=protein_coding;locus_tag=ACYKK2_001011 DBLQKW010000017.1 Protein Homology CDS 21058 23127 . - 0 ID=cds-HIH2231664.1;Parent=gene-ACYKK2_001011;Dbxref=NCBI_GP:HIH2231664.1;Name=HIH2231664.1;gbkey=CDS;gene=kpsC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344797.1;locus_tag=ACYKK2_001011;product=capsular polysaccharide biosynthesis protein;protein_id=HIH2231664.1;transl_table=11 DBLQKW010000017.1 tpg gene 23124 23636 . - . ID=gene-ACYKK2_001012;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=ACYKK2_001012 DBLQKW010000017.1 Protein Homology CDS 23124 23636 . - 0 ID=cds-HIH2231665.1;Parent=gene-ACYKK2_001012;Dbxref=NCBI_GP:HIH2231665.1;Name=HIH2231665.1;gbkey=CDS;gene=cysC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344798.1;locus_tag=ACYKK2_001012;product=cytidine diphosphoramidate kinase;protein_id=HIH2231665.1;transl_table=11 DBLQKW010000017.1 tpg gene 23626 24387 . - . ID=gene-ACYKK2_001013;Name=ACYKK2_001013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001013 DBLQKW010000017.1 Protein Homology CDS 23626 24387 . - 0 ID=cds-HIH2231666.1;Parent=gene-ACYKK2_001013;Dbxref=NCBI_GP:HIH2231666.1;Name=HIH2231666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344799.1;locus_tag=ACYKK2_001013;product=CTP:phosphoglutamine cytidylyltransferase;protein_id=HIH2231666.1;transl_table=11 DBLQKW010000017.1 tpg gene 24389 24991 . - . ID=gene-ACYKK2_001014;Name=ACYKK2_001014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001014 DBLQKW010000017.1 Protein Homology CDS 24389 24991 . - 0 ID=cds-HIH2231667.1;Parent=gene-ACYKK2_001014;Dbxref=NCBI_GP:HIH2231667.1;Name=HIH2231667.1;Ontology_term=GO:0045227,GO:0016811;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=capsule polysaccharide biosynthetic process|0045227||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344800.1;locus_tag=ACYKK2_001014;product=gamma-glutamyl-CDP-amidate hydrolase;protein_id=HIH2231667.1;transl_table=11 DBLQKW010000017.1 tpg gene 24982 27321 . - . ID=gene-ACYKK2_001015;Name=ACYKK2_001015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001015 DBLQKW010000017.1 Protein Homology CDS 24982 27321 . - 0 ID=cds-HIH2231668.1;Parent=gene-ACYKK2_001015;Dbxref=NCBI_GP:HIH2231668.1;Name=HIH2231668.1;Ontology_term=GO:0016310,GO:0016772;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344801.1;locus_tag=ACYKK2_001015;product=PEP-utilizing enzyme;protein_id=HIH2231668.1;transl_table=11 DBLQKW010000017.1 tpg gene 27336 28097 . - . ID=gene-ACYKK2_001016;Name=ACYKK2_001016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001016 DBLQKW010000017.1 Protein Homology CDS 27336 28097 . - 0 ID=cds-HIH2231669.1;Parent=gene-ACYKK2_001016;Dbxref=NCBI_GP:HIH2231669.1;Name=HIH2231669.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344802.1;locus_tag=ACYKK2_001016;product=class I SAM-dependent methyltransferase;protein_id=HIH2231669.1;transl_table=11 DBLQKW010000017.1 tpg gene 28148 28921 . - . ID=gene-ACYKK2_001017;Name=ACYKK2_001017;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001017 DBLQKW010000017.1 Protein Homology CDS 28148 28921 . - 0 ID=cds-HIH2231670.1;Parent=gene-ACYKK2_001017;Dbxref=NCBI_GP:HIH2231670.1;Name=HIH2231670.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344803.1;locus_tag=ACYKK2_001017;product=class I SAM-dependent methyltransferase;protein_id=HIH2231670.1;transl_table=11 DBLQKW010000017.1 tpg gene 28988 30214 . - . ID=gene-ACYKK2_001018;Name=ACYKK2_001018;end_range=30214,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001018;partial=true DBLQKW010000017.1 Protein Homology CDS 28988 30214 . - 0 ID=cds-HIH2231671.1;Parent=gene-ACYKK2_001018;Dbxref=NCBI_GP:HIH2231671.1;Name=HIH2231671.1;end_range=30214,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022634.6;locus_tag=ACYKK2_001018;partial=true;product=DUF2972 domain-containing protein;protein_id=HIH2231671.1;transl_table=11 ##sequence-region DBLQKW010000018.1 1 28105 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000018.1 tpg region 1 28105 . + . ID=DBLQKW010000018.1:1..28105;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000018.1 tpg gene 1 978 . - . ID=gene-ACYKK2_001019;Name=ACYKK2_001019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001019;partial=true;start_range=.,1 DBLQKW010000018.1 Protein Homology CDS 1 978 . - 0 ID=cds-HIH2231672.1;Parent=gene-ACYKK2_001019;Dbxref=NCBI_GP:HIH2231672.1;Name=HIH2231672.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002876186.1;locus_tag=ACYKK2_001019;partial=true;product=glycosyltransferase family 2 protein;protein_id=HIH2231672.1;start_range=.,1;transl_table=11 DBLQKW010000018.1 tpg pseudogene 997 1254 . - . ID=gene-ACYKK2_001020;Name=ACYKK2_001020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001020;pseudo=true DBLQKW010000018.1 Protein Homology CDS 997 1254 . - 0 ID=cds-ACYKK2_001020;Parent=gene-ACYKK2_001020;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002866154.1;locus_tag=ACYKK2_001020;product=hypothetical protein;pseudo=true;transl_table=11 DBLQKW010000018.1 tpg gene 1275 1802 . - . ID=gene-ACYKK2_001021;Name=ACYKK2_001021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001021 DBLQKW010000018.1 Protein Homology CDS 1275 1802 . - 0 ID=cds-HIH2231673.1;Parent=gene-ACYKK2_001021;Dbxref=NCBI_GP:HIH2231673.1;Name=HIH2231673.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002876185.1;locus_tag=ACYKK2_001021;product=GNAT family N-acetyltransferase;protein_id=HIH2231673.1;transl_table=11 DBLQKW010000018.1 tpg pseudogene 1824 2268 . - . ID=gene-ACYKK2_001022;Name=ACYKK2_001022;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001022;pseudo=true DBLQKW010000018.1 Protein Homology CDS 1824 2268 . - 0 ID=cds-ACYKK2_001022;Parent=gene-ACYKK2_001022;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020247173.1;locus_tag=ACYKK2_001022;product=DapH/DapD/GlmU-related protein;pseudo=true;transl_table=11 DBLQKW010000018.1 tpg gene 2258 2662 . - . ID=gene-ACYKK2_001023;Name=wlaRB;gbkey=Gene;gene=wlaRB;gene_biotype=protein_coding;locus_tag=ACYKK2_001023 DBLQKW010000018.1 Protein Homology CDS 2258 2662 . - 0 ID=cds-HIH2231674.1;Parent=gene-ACYKK2_001023;Dbxref=NCBI_GP:HIH2231674.1;Name=HIH2231674.1;gbkey=CDS;gene=wlaRB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002860228.1;locus_tag=ACYKK2_001023;product=class E lipooligosaccharide biosynthesis 3%2C4-ketoisomerase WlaRB;protein_id=HIH2231674.1;transl_table=11 DBLQKW010000018.1 tpg gene 2670 3107 . - . ID=gene-ACYKK2_001024;Name=wlaRA;gbkey=Gene;gene=wlaRA;gene_biotype=protein_coding;locus_tag=ACYKK2_001024 DBLQKW010000018.1 Protein Homology CDS 2670 3107 . - 0 ID=cds-HIH2231675.1;Parent=gene-ACYKK2_001024;Dbxref=NCBI_GP:HIH2231675.1;Name=HIH2231675.1;gbkey=CDS;gene=wlaRA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002891875.1;locus_tag=ACYKK2_001024;product=class E lipooligosaccharide biosynthesis 3%2C4-ketoisomerase WlaRA;protein_id=HIH2231675.1;transl_table=11 DBLQKW010000018.1 tpg gene 3110 4141 . - . ID=gene-ACYKK2_001025;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=ACYKK2_001025 DBLQKW010000018.1 Protein Homology CDS 3110 4141 . - 0 ID=cds-HIH2231676.1;Parent=gene-ACYKK2_001025;Dbxref=NCBI_GP:HIH2231676.1;Name=HIH2231676.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014517055.1;locus_tag=ACYKK2_001025;product=dTDP-glucose 4%2C6-dehydratase;protein_id=HIH2231676.1;transl_table=11 DBLQKW010000018.1 tpg gene 4141 5019 . - . ID=gene-ACYKK2_001026;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=ACYKK2_001026 DBLQKW010000018.1 Protein Homology CDS 4141 5019 . - 0 ID=cds-HIH2231677.1;Parent=gene-ACYKK2_001026;Dbxref=NCBI_GP:HIH2231677.1;Name=HIH2231677.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002877054.1;locus_tag=ACYKK2_001026;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=HIH2231677.1;transl_table=11 DBLQKW010000018.1 tpg gene 5030 5731 . - . ID=gene-ACYKK2_001027;Name=ACYKK2_001027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001027 DBLQKW010000018.1 Protein Homology CDS 5030 5731 . - 0 ID=cds-HIH2231678.1;Parent=gene-ACYKK2_001027;Dbxref=NCBI_GP:HIH2231678.1;Name=HIH2231678.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002876132.1;locus_tag=ACYKK2_001027;product=glycosyltransferase family 2 protein;protein_id=HIH2231678.1;transl_table=11 DBLQKW010000018.1 tpg gene 5728 6606 . - . ID=gene-ACYKK2_001028;Name=htrB;gbkey=Gene;gene=htrB;gene_biotype=protein_coding;locus_tag=ACYKK2_001028 DBLQKW010000018.1 Protein Homology CDS 5728 6606 . - 0 ID=cds-HIH2231679.1;Parent=gene-ACYKK2_001028;Dbxref=NCBI_GP:HIH2231679.1;Name=HIH2231679.1;gbkey=CDS;gene=htrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002932656.1;locus_tag=ACYKK2_001028;product=lipid A biosynthesis lauroyl acyltransferase HtrB;protein_id=HIH2231679.1;transl_table=11 DBLQKW010000018.1 tpg gene 6596 7624 . - . ID=gene-ACYKK2_001029;Name=waaC;gbkey=Gene;gene=waaC;gene_biotype=protein_coding;locus_tag=ACYKK2_001029 DBLQKW010000018.1 Protein Homology CDS 6596 7624 . - 0 ID=cds-HIH2231680.1;Parent=gene-ACYKK2_001029;Dbxref=NCBI_GP:HIH2231680.1;Name=HIH2231680.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=waaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344526.1;locus_tag=ACYKK2_001029;product=lipopolysaccharide heptosyltransferase I;protein_id=HIH2231680.1;transl_table=11 DBLQKW010000018.1 tpg gene 7691 8485 . + . ID=gene-ACYKK2_001030;Name=ACYKK2_001030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001030 DBLQKW010000018.1 Protein Homology CDS 7691 8485 . + 0 ID=cds-HIH2231681.1;Parent=gene-ACYKK2_001030;Dbxref=NCBI_GP:HIH2231681.1;Name=HIH2231681.1;Ontology_term=GO:0003676,GO:0008408;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344525.1;locus_tag=ACYKK2_001030;product=3'-5' exonuclease;protein_id=HIH2231681.1;transl_table=11 DBLQKW010000018.1 tpg gene 8544 9530 . + . ID=gene-ACYKK2_001031;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=ACYKK2_001031 DBLQKW010000018.1 Protein Homology CDS 8544 9530 . + 0 ID=cds-HIH2231682.1;Parent=gene-ACYKK2_001031;Dbxref=NCBI_GP:HIH2231682.1;Name=HIH2231682.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344524.1;locus_tag=ACYKK2_001031;product=UDP-glucose 4-epimerase GalE;protein_id=HIH2231682.1;transl_table=11 DBLQKW010000018.1 tpg gene 9524 11218 . + . ID=gene-ACYKK2_001032;Name=pglK;gbkey=Gene;gene=pglK;gene_biotype=protein_coding;locus_tag=ACYKK2_001032 DBLQKW010000018.1 Protein Homology CDS 9524 11218 . + 0 ID=cds-HIH2231683.1;Parent=gene-ACYKK2_001032;Dbxref=NCBI_GP:HIH2231683.1;Name=HIH2231683.1;Ontology_term=GO:0006487,GO:0016887,GO:0034040;gbkey=CDS;gene=pglK;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA;go_process=protein N-linked glycosylation|0006487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344523.1;locus_tag=ACYKK2_001032;product=BC-type lipopolysaccharide transporter PglK;protein_id=HIH2231683.1;transl_table=11 DBLQKW010000018.1 tpg gene 11215 12294 . + . ID=gene-ACYKK2_001033;Name=pglH;gbkey=Gene;gene=pglH;gene_biotype=protein_coding;locus_tag=ACYKK2_001033 DBLQKW010000018.1 Protein Homology CDS 11215 12294 . + 0 ID=cds-HIH2231684.1;Parent=gene-ACYKK2_001033;Dbxref=NCBI_GP:HIH2231684.1;Name=HIH2231684.1;Ontology_term=GO:0018279,GO:0016758;gbkey=CDS;gene=pglH;go_function=hexosyltransferase activity|0016758||IEA;go_process=protein N-linked glycosylation via asparagine|0018279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344522.1;locus_tag=ACYKK2_001033;product=GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)-diNAcBac-PP-undecaprenol alpha-1%2C4-N-acetyl-D-galactosaminyltransferase;protein_id=HIH2231684.1;transl_table=11 DBLQKW010000018.1 tpg gene 12287 13216 . + . ID=gene-ACYKK2_001034;Name=pglI;gbkey=Gene;gene=pglI;gene_biotype=protein_coding;locus_tag=ACYKK2_001034 DBLQKW010000018.1 Protein Homology CDS 12287 13216 . + 0 ID=cds-HIH2231685.1;Parent=gene-ACYKK2_001034;Dbxref=NCBI_GP:HIH2231685.1;Name=HIH2231685.1;Ontology_term=GO:0018279,GO:0046527;gbkey=CDS;gene=pglI;go_function=glucosyltransferase activity|0046527||IEA;go_process=protein N-linked glycosylation via asparagine|0018279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344521.1;locus_tag=ACYKK2_001034;product=GalNAc(5)-diNAcBac-PP-undecaprenol beta-1%2C3-glucosyltransferase;protein_id=HIH2231685.1;transl_table=11 DBLQKW010000018.1 tpg gene 13204 14301 . + . ID=gene-ACYKK2_001035;Name=pglJ;gbkey=Gene;gene=pglJ;gene_biotype=protein_coding;locus_tag=ACYKK2_001035 DBLQKW010000018.1 Protein Homology CDS 13204 14301 . + 0 ID=cds-HIH2231686.1;Parent=gene-ACYKK2_001035;Dbxref=NCBI_GP:HIH2231686.1;Name=HIH2231686.1;Ontology_term=GO:0009103,GO:0018279,GO:0016758;gbkey=CDS;gene=pglJ;go_function=hexosyltransferase activity|0016758||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,protein N-linked glycosylation via asparagine|0018279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344520.1;locus_tag=ACYKK2_001035;product=N-acetylgalactosamine-N%2CN'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase;protein_id=HIH2231686.1;transl_table=11 DBLQKW010000018.1 tpg gene 14305 16446 . + . ID=gene-ACYKK2_001036;Name=pglB;gbkey=Gene;gene=pglB;gene_biotype=protein_coding;locus_tag=ACYKK2_001036 DBLQKW010000018.1 Protein Homology CDS 14305 16446 . + 0 ID=cds-HIH2231687.1;Parent=gene-ACYKK2_001036;Dbxref=NCBI_GP:HIH2231687.1;Name=HIH2231687.1;gbkey=CDS;gene=pglB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344519.1;locus_tag=ACYKK2_001036;product=undecaprenyl-diphosphooligosaccharide--protein glycotransferase;protein_id=HIH2231687.1;transl_table=11 DBLQKW010000018.1 tpg gene 16456 17586 . + . ID=gene-ACYKK2_001037;Name=pglA;gbkey=Gene;gene=pglA;gene_biotype=protein_coding;locus_tag=ACYKK2_001037 DBLQKW010000018.1 Protein Homology CDS 16456 17586 . + 0 ID=cds-HIH2231688.1;Parent=gene-ACYKK2_001037;Dbxref=NCBI_GP:HIH2231688.1;Name=HIH2231688.1;gbkey=CDS;gene=pglA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344518.1;locus_tag=ACYKK2_001037;product=N%2CN'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1%2C3-N-acetylgalactosaminyltransferase;protein_id=HIH2231688.1;transl_table=11 DBLQKW010000018.1 tpg gene 17579 18181 . + . ID=gene-ACYKK2_001038;Name=pglC;gbkey=Gene;gene=pglC;gene_biotype=protein_coding;locus_tag=ACYKK2_001038 DBLQKW010000018.1 Protein Homology CDS 17579 18181 . + 0 ID=cds-HIH2231689.1;Parent=gene-ACYKK2_001038;Dbxref=NCBI_GP:HIH2231689.1;Name=HIH2231689.1;gbkey=CDS;gene=pglC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344517.1;locus_tag=ACYKK2_001038;product=undecaprenyl phosphate N%2CN'-diacetylbacillosamine 1-phosphate transferase;protein_id=HIH2231689.1;transl_table=11 DBLQKW010000018.1 tpg gene 18168 18758 . + . ID=gene-ACYKK2_001039;Name=pglD;gbkey=Gene;gene=pglD;gene_biotype=protein_coding;locus_tag=ACYKK2_001039 DBLQKW010000018.1 Protein Homology CDS 18168 18758 . + 0 ID=cds-HIH2231690.1;Parent=gene-ACYKK2_001039;Dbxref=NCBI_GP:HIH2231690.1;Name=HIH2231690.1;gbkey=CDS;gene=pglD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002872223.1;locus_tag=ACYKK2_001039;product=UDP-N-acetylbacillosamine N-acetyltransferase;protein_id=HIH2231690.1;transl_table=11 DBLQKW010000018.1 tpg gene 18856 20016 . + . ID=gene-ACYKK2_001040;Name=pglE;gbkey=Gene;gene=pglE;gene_biotype=protein_coding;locus_tag=ACYKK2_001040 DBLQKW010000018.1 Protein Homology CDS 18856 20016 . + 0 ID=cds-HIH2231691.1;Parent=gene-ACYKK2_001040;Dbxref=NCBI_GP:HIH2231691.1;Name=HIH2231691.1;gbkey=CDS;gene=pglE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344514.1;locus_tag=ACYKK2_001040;product=UDP-N-acetylbacillosamine transaminase;protein_id=HIH2231691.1;transl_table=11 DBLQKW010000018.1 tpg gene 20018 21793 . + . ID=gene-ACYKK2_001041;Name=pglF;gbkey=Gene;gene=pglF;gene_biotype=protein_coding;locus_tag=ACYKK2_001041 DBLQKW010000018.1 Protein Homology CDS 20018 21793 . + 0 ID=cds-HIH2231692.1;Parent=gene-ACYKK2_001041;Dbxref=NCBI_GP:HIH2231692.1;Name=HIH2231692.1;gbkey=CDS;gene=pglF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344513.1;locus_tag=ACYKK2_001041;product=UDP-N-acetylglucosamine 4%2C6-dehydratase (configuration-retaining);protein_id=HIH2231692.1;transl_table=11 DBLQKW010000018.1 tpg gene 21793 22686 . + . ID=gene-ACYKK2_001042;Name=pglG;gbkey=Gene;gene=pglG;gene_biotype=protein_coding;locus_tag=ACYKK2_001042 DBLQKW010000018.1 Protein Homology CDS 21793 22686 . + 0 ID=cds-HIH2231693.1;Parent=gene-ACYKK2_001042;Dbxref=NCBI_GP:HIH2231693.1;Name=HIH2231693.1;Ontology_term=GO:0007165;gbkey=CDS;gene=pglG;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344512.1;locus_tag=ACYKK2_001042;product=PDC sensor domain-containing protein;protein_id=HIH2231693.1;transl_table=11 DBLQKW010000018.1 tpg gene 22799 23191 . + . ID=gene-ACYKK2_001043;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=ACYKK2_001043 DBLQKW010000018.1 Protein Homology CDS 22799 23191 . + 0 ID=cds-HIH2231694.1;Parent=gene-ACYKK2_001043;Dbxref=NCBI_GP:HIH2231694.1;Name=HIH2231694.1;Ontology_term=GO:0000160,GO:0006935,GO:0000156;gbkey=CDS;gene=cheY;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344511.1;locus_tag=ACYKK2_001043;product=chemotaxis response regulator CheY;protein_id=HIH2231694.1;transl_table=11 DBLQKW010000018.1 tpg gene 23214 24059 . + . ID=gene-ACYKK2_001044;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=ACYKK2_001044 DBLQKW010000018.1 Protein Homology CDS 23214 24059 . + 0 ID=cds-HIH2231695.1;Parent=gene-ACYKK2_001044;Dbxref=NCBI_GP:HIH2231695.1;Name=HIH2231695.1;gbkey=CDS;gene=prmA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344510.1;locus_tag=ACYKK2_001044;product=50S ribosomal protein L11 methyltransferase;protein_id=HIH2231695.1;transl_table=11 DBLQKW010000018.1 tpg gene 24063 26000 . + . ID=gene-ACYKK2_001045;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=ACYKK2_001045 DBLQKW010000018.1 Protein Homology CDS 24063 26000 . + 0 ID=cds-HIH2231696.1;Parent=gene-ACYKK2_001045;Dbxref=NCBI_GP:HIH2231696.1;Name=HIH2231696.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344509.1;locus_tag=ACYKK2_001045;product=ATP-dependent zinc metalloprotease FtsH;protein_id=HIH2231696.1;transl_table=11 DBLQKW010000018.1 tpg gene 25997 26614 . + . ID=gene-ACYKK2_001046;Name=ACYKK2_001046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001046 DBLQKW010000018.1 Protein Homology CDS 25997 26614 . + 0 ID=cds-HIH2231697.1;Parent=gene-ACYKK2_001046;Dbxref=NCBI_GP:HIH2231697.1;Name=HIH2231697.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344508.1;locus_tag=ACYKK2_001046;product=phosphatidylserine decarboxylase;protein_id=HIH2231697.1;transl_table=11 DBLQKW010000018.1 tpg gene 26624 27352 . + . ID=gene-ACYKK2_001047;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=ACYKK2_001047 DBLQKW010000018.1 Protein Homology CDS 26624 27352 . + 0 ID=cds-HIH2231698.1;Parent=gene-ACYKK2_001047;Dbxref=NCBI_GP:HIH2231698.1;Name=HIH2231698.1;Ontology_term=GO:0008654,GO:0003882;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-serine O-phosphatidyltransferase activity|0003882||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344507.1;locus_tag=ACYKK2_001047;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=HIH2231698.1;transl_table=11 DBLQKW010000018.1 tpg gene 27343 28105 . - . ID=gene-ACYKK2_001048;Name=ACYKK2_001048;end_range=28105,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001048;partial=true DBLQKW010000018.1 Protein Homology CDS 27343 28105 . - 1 ID=cds-HIH2231699.1;Parent=gene-ACYKK2_001048;Dbxref=NCBI_GP:HIH2231699.1;Name=HIH2231699.1;end_range=28105,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344506.1;locus_tag=ACYKK2_001048;partial=true;product=ferritin-like domain-containing protein;protein_id=HIH2231699.1;transl_table=11 ##sequence-region DBLQKW010000019.1 1 27926 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000019.1 tpg region 1 27926 . + . ID=DBLQKW010000019.1:1..27926;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000019.1 tpg gene 1 826 . + . ID=gene-ACYKK2_001049;Name=ACYKK2_001049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001049;partial=true;start_range=.,1 DBLQKW010000019.1 Protein Homology CDS 1 826 . + 1 ID=cds-HIH2231700.1;Parent=gene-ACYKK2_001049;Dbxref=NCBI_GP:HIH2231700.1;Name=HIH2231700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015453641.1;locus_tag=ACYKK2_001049;partial=true;product=bacteriophage T4 gp5 trimerization domain-containing protein;protein_id=HIH2231700.1;start_range=.,1;transl_table=11 DBLQKW010000019.1 tpg gene 840 1619 . + . ID=gene-ACYKK2_001050;Name=ACYKK2_001050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001050 DBLQKW010000019.1 Protein Homology CDS 840 1619 . + 0 ID=cds-HIH2231701.1;Parent=gene-ACYKK2_001050;Dbxref=NCBI_GP:HIH2231701.1;Name=HIH2231701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002779748.1;locus_tag=ACYKK2_001050;product=hypothetical protein;protein_id=HIH2231701.1;transl_table=11 DBLQKW010000019.1 tpg gene 1603 1776 . + . ID=gene-ACYKK2_001051;Name=ACYKK2_001051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001051 DBLQKW010000019.1 GeneMarkS-2+ CDS 1603 1776 . + 0 ID=cds-HIH2231702.1;Parent=gene-ACYKK2_001051;Dbxref=NCBI_GP:HIH2231702.1;Name=HIH2231702.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001051;product=hypothetical protein;protein_id=HIH2231702.1;transl_table=11 DBLQKW010000019.1 tpg gene 1792 2652 . + . ID=gene-ACYKK2_001052;Name=ACYKK2_001052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001052 DBLQKW010000019.1 GeneMarkS-2+ CDS 1792 2652 . + 0 ID=cds-HIH2231703.1;Parent=gene-ACYKK2_001052;Dbxref=NCBI_GP:HIH2231703.1;Name=HIH2231703.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001052;product=hypothetical protein;protein_id=HIH2231703.1;transl_table=11 DBLQKW010000019.1 tpg gene 2640 4592 . + . ID=gene-ACYKK2_001053;Name=ACYKK2_001053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001053 DBLQKW010000019.1 Protein Homology CDS 2640 4592 . + 0 ID=cds-HIH2231704.1;Parent=gene-ACYKK2_001053;Dbxref=NCBI_GP:HIH2231704.1;Name=HIH2231704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935417.1;locus_tag=ACYKK2_001053;product=hypothetical protein;protein_id=HIH2231704.1;transl_table=11 DBLQKW010000019.1 tpg gene 4585 5859 . + . ID=gene-ACYKK2_001054;Name=ACYKK2_001054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001054 DBLQKW010000019.1 Protein Homology CDS 4585 5859 . + 0 ID=cds-HIH2231705.1;Parent=gene-ACYKK2_001054;Dbxref=NCBI_GP:HIH2231705.1;Name=HIH2231705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002834065.1;locus_tag=ACYKK2_001054;product=hypothetical protein;protein_id=HIH2231705.1;transl_table=11 DBLQKW010000019.1 tpg gene 5840 7108 . + . ID=gene-ACYKK2_001055;Name=ACYKK2_001055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001055 DBLQKW010000019.1 Protein Homology CDS 5840 7108 . + 0 ID=cds-HIH2231706.1;Parent=gene-ACYKK2_001055;Dbxref=NCBI_GP:HIH2231706.1;Name=HIH2231706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002902116.1;locus_tag=ACYKK2_001055;product=hypothetical protein;protein_id=HIH2231706.1;transl_table=11 DBLQKW010000019.1 tpg gene 8177 8626 . - . ID=gene-ACYKK2_001056;Name=ACYKK2_001056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001056 DBLQKW010000019.1 Protein Homology CDS 8177 8626 . - 0 ID=cds-HIH2231707.1;Parent=gene-ACYKK2_001056;Dbxref=NCBI_GP:HIH2231707.1;Name=HIH2231707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344407.1;locus_tag=ACYKK2_001056;product=hypothetical protein;protein_id=HIH2231707.1;transl_table=11 DBLQKW010000019.1 tpg gene 8642 11887 . - . ID=gene-ACYKK2_001057;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=ACYKK2_001057 DBLQKW010000019.1 Protein Homology CDS 8642 11887 . - 0 ID=cds-HIH2231708.1;Parent=gene-ACYKK2_001057;Dbxref=NCBI_GP:HIH2231708.1;Name=HIH2231708.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344408.1;locus_tag=ACYKK2_001057;product=cytochrome c biogenesis protein CcsA;protein_id=HIH2231708.1;transl_table=11 DBLQKW010000019.1 tpg gene 11905 12600 . - . ID=gene-ACYKK2_001058;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=ACYKK2_001058 DBLQKW010000019.1 Protein Homology CDS 11905 12600 . - 0 ID=cds-HIH2231709.1;Parent=gene-ACYKK2_001058;Dbxref=NCBI_GP:HIH2231709.1;Name=HIH2231709.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=livF;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344409.1;locus_tag=ACYKK2_001058;product=ABC transporter ATP-binding protein;protein_id=HIH2231709.1;transl_table=11 DBLQKW010000019.1 tpg gene 12587 13357 . - . ID=gene-ACYKK2_001059;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=ACYKK2_001059 DBLQKW010000019.1 Protein Homology CDS 12587 13357 . - 0 ID=cds-HIH2231710.1;Parent=gene-ACYKK2_001059;Dbxref=NCBI_GP:HIH2231710.1;Name=HIH2231710.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=livG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344410.1;locus_tag=ACYKK2_001059;product=ABC transporter ATP-binding protein;protein_id=HIH2231710.1;transl_table=11 DBLQKW010000019.1 tpg gene 13354 14406 . - . ID=gene-ACYKK2_001060;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=ACYKK2_001060 DBLQKW010000019.1 Protein Homology CDS 13354 14406 . - 0 ID=cds-HIH2231711.1;Parent=gene-ACYKK2_001060;Dbxref=NCBI_GP:HIH2231711.1;Name=HIH2231711.1;Ontology_term=GO:0015803,GO:0042626,GO:0140359;gbkey=CDS;gene=livM;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344411.1;locus_tag=ACYKK2_001060;product=branched-chain amino acid ABC transporter permease;protein_id=HIH2231711.1;transl_table=11 DBLQKW010000019.1 tpg gene 14406 15302 . - . ID=gene-ACYKK2_001061;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=ACYKK2_001061 DBLQKW010000019.1 Protein Homology CDS 14406 15302 . - 0 ID=cds-HIH2231712.1;Parent=gene-ACYKK2_001061;Dbxref=NCBI_GP:HIH2231712.1;Name=HIH2231712.1;Ontology_term=GO:0015803,GO:0042626,GO:0140359;gbkey=CDS;gene=livH;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344412.1;locus_tag=ACYKK2_001061;product=branched-chain amino acid ABC transporter permease;protein_id=HIH2231712.1;transl_table=11 DBLQKW010000019.1 tpg gene 15321 16430 . - . ID=gene-ACYKK2_001062;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=ACYKK2_001062 DBLQKW010000019.1 Protein Homology CDS 15321 16430 . - 0 ID=cds-HIH2231713.1;Parent=gene-ACYKK2_001062;Dbxref=NCBI_GP:HIH2231713.1;Name=HIH2231713.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344413.1;locus_tag=ACYKK2_001062;product=ABC transporter substrate-binding protein;protein_id=HIH2231713.1;transl_table=11 DBLQKW010000019.1 tpg gene 16452 17567 . - . ID=gene-ACYKK2_001063;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=ACYKK2_001063 DBLQKW010000019.1 Protein Homology CDS 16452 17567 . - 0 ID=cds-HIH2231714.1;Parent=gene-ACYKK2_001063;Dbxref=NCBI_GP:HIH2231714.1;Name=HIH2231714.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344414.1;locus_tag=ACYKK2_001063;product=ABC transporter substrate-binding protein;protein_id=HIH2231714.1;transl_table=11 DBLQKW010000019.1 tpg gene 17598 18032 . - . ID=gene-ACYKK2_001064;Name=ACYKK2_001064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001064 DBLQKW010000019.1 Protein Homology CDS 17598 18032 . - 0 ID=cds-HIH2231715.1;Parent=gene-ACYKK2_001064;Dbxref=NCBI_GP:HIH2231715.1;Name=HIH2231715.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344415.1;locus_tag=ACYKK2_001064;product=c-type cytochrome;protein_id=HIH2231715.1;transl_table=11 DBLQKW010000019.1 tpg gene 18041 18232 . - . ID=gene-ACYKK2_001065;Name=ACYKK2_001065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001065 DBLQKW010000019.1 Protein Homology CDS 18041 18232 . - 0 ID=cds-HIH2231716.1;Parent=gene-ACYKK2_001065;Dbxref=NCBI_GP:HIH2231716.1;Name=HIH2231716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344416.1;locus_tag=ACYKK2_001065;product=mini-MOMP protein;protein_id=HIH2231716.1;transl_table=11 DBLQKW010000019.1 tpg gene 18285 18791 . - . ID=gene-ACYKK2_001066;Name=ACYKK2_001066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001066 DBLQKW010000019.1 Protein Homology CDS 18285 18791 . - 0 ID=cds-HIH2231717.1;Parent=gene-ACYKK2_001066;Dbxref=NCBI_GP:HIH2231717.1;Name=HIH2231717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344417.1;locus_tag=ACYKK2_001066;product=YqhA family protein;protein_id=HIH2231717.1;transl_table=11 DBLQKW010000019.1 tpg gene 18800 19831 . - . ID=gene-ACYKK2_001067;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=ACYKK2_001067 DBLQKW010000019.1 Protein Homology CDS 18800 19831 . - 0 ID=cds-HIH2231718.1;Parent=gene-ACYKK2_001067;Dbxref=NCBI_GP:HIH2231718.1;Name=HIH2231718.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344418.1;locus_tag=ACYKK2_001067;product=aspartate-semialdehyde dehydrogenase;protein_id=HIH2231718.1;transl_table=11 DBLQKW010000019.1 tpg gene 19831 21132 . - . ID=gene-ACYKK2_001068;Name=flgR;gbkey=Gene;gene=flgR;gene_biotype=protein_coding;locus_tag=ACYKK2_001068 DBLQKW010000019.1 Protein Homology CDS 19831 21132 . - 0 ID=cds-HIH2231719.1;Parent=gene-ACYKK2_001068;Dbxref=NCBI_GP:HIH2231719.1;Name=HIH2231719.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677,GO:0005524;gbkey=CDS;gene=flgR;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344419.1;locus_tag=ACYKK2_001068;product=sigma-54-dependent transcriptional regulator;protein_id=HIH2231719.1;transl_table=11 DBLQKW010000019.1 tpg gene 21189 21638 . - . ID=gene-ACYKK2_001069;Name=flgQ;gbkey=Gene;gene=flgQ;gene_biotype=protein_coding;locus_tag=ACYKK2_001069 DBLQKW010000019.1 Protein Homology CDS 21189 21638 . - 0 ID=cds-HIH2231720.1;Parent=gene-ACYKK2_001069;Dbxref=NCBI_GP:HIH2231720.1;Name=HIH2231720.1;gbkey=CDS;gene=flgQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344420.1;locus_tag=ACYKK2_001069;product=flagellar assembly protein FlgQ;protein_id=HIH2231720.1;transl_table=11 DBLQKW010000019.1 tpg gene 21614 22129 . - . ID=gene-ACYKK2_001070;Name=flgP;gbkey=Gene;gene=flgP;gene_biotype=protein_coding;locus_tag=ACYKK2_001070 DBLQKW010000019.1 Protein Homology CDS 21614 22129 . - 0 ID=cds-HIH2231721.1;Parent=gene-ACYKK2_001070;Dbxref=NCBI_GP:HIH2231721.1;Name=HIH2231721.1;gbkey=CDS;gene=flgP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344421.1;locus_tag=ACYKK2_001070;product=flagellar assembly lipoprotein FlgP;protein_id=HIH2231721.1;transl_table=11 DBLQKW010000019.1 tpg gene 22199 24787 . - . ID=gene-ACYKK2_001071;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=ACYKK2_001071 DBLQKW010000019.1 Protein Homology CDS 22199 24787 . - 0 ID=cds-HIH2231722.1;Parent=gene-ACYKK2_001071;Dbxref=NCBI_GP:HIH2231722.1;Name=HIH2231722.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811340.1;locus_tag=ACYKK2_001071;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=HIH2231722.1;transl_table=11 DBLQKW010000019.1 tpg gene 24828 25403 . - . ID=gene-ACYKK2_001072;Name=ACYKK2_001072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001072 DBLQKW010000019.1 Protein Homology CDS 24828 25403 . - 0 ID=cds-HIH2231723.1;Parent=gene-ACYKK2_001072;Dbxref=NCBI_GP:HIH2231723.1;Name=HIH2231723.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344423.1;locus_tag=ACYKK2_001072;product=ComF family protein;protein_id=HIH2231723.1;transl_table=11 DBLQKW010000019.1 tpg gene 25400 26044 . - . ID=gene-ACYKK2_001073;Name=mapA;gbkey=Gene;gene=mapA;gene_biotype=protein_coding;locus_tag=ACYKK2_001073 DBLQKW010000019.1 Protein Homology CDS 25400 26044 . - 0 ID=cds-HIH2231724.1;Parent=gene-ACYKK2_001073;Dbxref=NCBI_GP:HIH2231724.1;Name=HIH2231724.1;gbkey=CDS;gene=mapA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344424.1;locus_tag=ACYKK2_001073;product=outer membrane lipoprotein MapA;protein_id=HIH2231724.1;transl_table=11 DBLQKW010000019.1 tpg gene 26121 27917 . - . ID=gene-ACYKK2_001074;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=ACYKK2_001074 DBLQKW010000019.1 Protein Homology CDS 26121 27917 . - 0 ID=cds-HIH2231725.1;Parent=gene-ACYKK2_001074;Dbxref=NCBI_GP:HIH2231725.1;Name=HIH2231725.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344425.1;locus_tag=ACYKK2_001074;product=translation elongation factor 4;protein_id=HIH2231725.1;transl_table=11 ##sequence-region DBLQKW010000020.1 1 26450 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000020.1 tpg region 1 26450 . + . ID=DBLQKW010000020.1:1..26450;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000020.1 tpg gene 1 757 . - . ID=gene-ACYKK2_001075;Name=ACYKK2_001075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001075;partial=true;start_range=.,1 DBLQKW010000020.1 Protein Homology CDS 1 757 . - 0 ID=cds-HIH2231726.1;Parent=gene-ACYKK2_001075;Dbxref=NCBI_GP:HIH2231726.1;Name=HIH2231726.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345075.1;locus_tag=ACYKK2_001075;partial=true;product=pseudouridine synthase;protein_id=HIH2231726.1;start_range=.,1;transl_table=11 DBLQKW010000020.1 tpg gene 793 2787 . - . ID=gene-ACYKK2_001076;Name=ACYKK2_001076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001076 DBLQKW010000020.1 Protein Homology CDS 793 2787 . - 0 ID=cds-HIH2231727.1;Parent=gene-ACYKK2_001076;Dbxref=NCBI_GP:HIH2231727.1;Name=HIH2231727.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004521,GO:0004534,GO:0008270,GO:0046872;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA,5'-3' RNA exonuclease activity|0004534||IEA,zinc ion binding|0008270||IEA,metal ion binding|0046872||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345076.1;locus_tag=ACYKK2_001076;product=ribonuclease J;protein_id=HIH2231727.1;transl_table=11 DBLQKW010000020.1 tpg gene 2756 3556 . - . ID=gene-ACYKK2_001077;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=ACYKK2_001077 DBLQKW010000020.1 Protein Homology CDS 2756 3556 . - 0 ID=cds-HIH2231728.1;Parent=gene-ACYKK2_001077;Dbxref=NCBI_GP:HIH2231728.1;Name=HIH2231728.1;Ontology_term=GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345077.1;locus_tag=ACYKK2_001077;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=HIH2231728.1;transl_table=11 DBLQKW010000020.1 tpg gene 3636 4172 . + . ID=gene-ACYKK2_001078;Name=ACYKK2_001078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001078 DBLQKW010000020.1 Protein Homology CDS 3636 4172 . + 0 ID=cds-HIH2231729.1;Parent=gene-ACYKK2_001078;Dbxref=NCBI_GP:HIH2231729.1;Name=HIH2231729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345078.1;locus_tag=ACYKK2_001078;product=purine-nucleoside phosphorylase;protein_id=HIH2231729.1;transl_table=11 DBLQKW010000020.1 tpg gene 4196 5266 . + . ID=gene-ACYKK2_001079;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=ACYKK2_001079 DBLQKW010000020.1 Protein Homology CDS 4196 5266 . + 0 ID=cds-HIH2231730.1;Parent=gene-ACYKK2_001079;Dbxref=NCBI_GP:HIH2231730.1;Name=HIH2231730.1;Ontology_term=GO:0030488,GO:0070475,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=tRNA methylation|0030488||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345079.1;locus_tag=ACYKK2_001079;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=HIH2231730.1;transl_table=11 DBLQKW010000020.1 tpg gene 5263 5361 . + . ID=gene-ACYKK2_001080;Name=ACYKK2_001080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001080 DBLQKW010000020.1 Protein Homology CDS 5263 5361 . + 0 ID=cds-HIH2231731.1;Parent=gene-ACYKK2_001080;Dbxref=NCBI_GP:HIH2231731.1;Name=HIH2231731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345080.1;locus_tag=ACYKK2_001080;product=hypothetical protein;protein_id=HIH2231731.1;transl_table=11 DBLQKW010000020.1 tpg gene 5375 5451 . - . ID=gene-ACYKK2_001081;Name=ACYKK2_001081;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_001081 DBLQKW010000020.1 tRNAscan-SE tRNA 5375 5451 . - . ID=rna-ACYKK2_001081;Parent=gene-ACYKK2_001081;anticodon=(pos:complement(5415..5417));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001081;product=tRNA-Met DBLQKW010000020.1 tRNAscan-SE exon 5375 5451 . - . ID=exon-ACYKK2_001081-1;Parent=rna-ACYKK2_001081;anticodon=(pos:complement(5415..5417));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001081;product=tRNA-Met DBLQKW010000020.1 tpg gene 5586 5673 . + . ID=gene-ACYKK2_001082;Name=ACYKK2_001082;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_001082 DBLQKW010000020.1 tRNAscan-SE tRNA 5586 5673 . + . ID=rna-ACYKK2_001082;Parent=gene-ACYKK2_001082;anticodon=(pos:5620..5622);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001082;product=tRNA-Ser DBLQKW010000020.1 tRNAscan-SE exon 5586 5673 . + . ID=exon-ACYKK2_001082-1;Parent=rna-ACYKK2_001082;anticodon=(pos:5620..5622);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001082;product=tRNA-Ser DBLQKW010000020.1 tpg gene 5720 5795 . + . ID=gene-ACYKK2_001083;Name=ACYKK2_001083;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_001083 DBLQKW010000020.1 tRNAscan-SE tRNA 5720 5795 . + . ID=rna-ACYKK2_001083;Parent=gene-ACYKK2_001083;anticodon=(pos:5753..5755);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001083;product=tRNA-Ala DBLQKW010000020.1 tRNAscan-SE exon 5720 5795 . + . ID=exon-ACYKK2_001083-1;Parent=rna-ACYKK2_001083;anticodon=(pos:5753..5755);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001083;product=tRNA-Ala DBLQKW010000020.1 tpg gene 5799 5874 . + . ID=gene-ACYKK2_001084;Name=ACYKK2_001084;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_001084 DBLQKW010000020.1 tRNAscan-SE tRNA 5799 5874 . + . ID=rna-ACYKK2_001084;Parent=gene-ACYKK2_001084;anticodon=(pos:5832..5834);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001084;product=tRNA-Val DBLQKW010000020.1 tRNAscan-SE exon 5799 5874 . + . ID=exon-ACYKK2_001084-1;Parent=rna-ACYKK2_001084;anticodon=(pos:5832..5834);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001084;product=tRNA-Val DBLQKW010000020.1 tpg gene 5902 6432 . + . ID=gene-ACYKK2_001085;Name=ACYKK2_001085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001085 DBLQKW010000020.1 Protein Homology CDS 5902 6432 . + 0 ID=cds-HIH2231732.1;Parent=gene-ACYKK2_001085;Dbxref=NCBI_GP:HIH2231732.1;Name=HIH2231732.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345081.1;locus_tag=ACYKK2_001085;product=GNAT family N-acetyltransferase;protein_id=HIH2231732.1;transl_table=11 DBLQKW010000020.1 tpg gene 6412 7014 . - . ID=gene-ACYKK2_001086;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=ACYKK2_001086 DBLQKW010000020.1 Protein Homology CDS 6412 7014 . - 0 ID=cds-HIH2231733.1;Parent=gene-ACYKK2_001086;Dbxref=NCBI_GP:HIH2231733.1;Name=HIH2231733.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345082.1;locus_tag=ACYKK2_001086;product=3-isopropylmalate dehydratase small subunit;protein_id=HIH2231733.1;transl_table=11 DBLQKW010000020.1 tpg gene 7016 8428 . - . ID=gene-ACYKK2_001087;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=ACYKK2_001087 DBLQKW010000020.1 Protein Homology CDS 7016 8428 . - 0 ID=cds-HIH2231734.1;Parent=gene-ACYKK2_001087;Dbxref=NCBI_GP:HIH2231734.1;Name=HIH2231734.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345083.1;locus_tag=ACYKK2_001087;product=3-isopropylmalate dehydratase large subunit;protein_id=HIH2231734.1;transl_table=11 DBLQKW010000020.1 tpg gene 8415 9491 . - . ID=gene-ACYKK2_001088;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=ACYKK2_001088 DBLQKW010000020.1 Protein Homology CDS 8415 9491 . - 0 ID=cds-HIH2231735.1;Parent=gene-ACYKK2_001088;Dbxref=NCBI_GP:HIH2231735.1;Name=HIH2231735.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345084.1;locus_tag=ACYKK2_001088;product=3-isopropylmalate dehydrogenase;protein_id=HIH2231735.1;transl_table=11 DBLQKW010000020.1 tpg gene 9478 11025 . - . ID=gene-ACYKK2_001089;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=ACYKK2_001089 DBLQKW010000020.1 Protein Homology CDS 9478 11025 . - 0 ID=cds-HIH2231736.1;Parent=gene-ACYKK2_001089;Dbxref=NCBI_GP:HIH2231736.1;Name=HIH2231736.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002886492.1;locus_tag=ACYKK2_001089;product=2-isopropylmalate synthase;protein_id=HIH2231736.1;transl_table=11 DBLQKW010000020.1 tpg gene 11345 11974 . + . ID=gene-ACYKK2_001090;Name=ACYKK2_001090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001090 DBLQKW010000020.1 Protein Homology CDS 11345 11974 . + 0 ID=cds-HIH2231737.1;Parent=gene-ACYKK2_001090;Dbxref=NCBI_GP:HIH2231737.1;Name=HIH2231737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345086.1;locus_tag=ACYKK2_001090;product=hypothetical protein;protein_id=HIH2231737.1;transl_table=11 DBLQKW010000020.1 tpg gene 12010 12654 . - . ID=gene-ACYKK2_001091;Name=ACYKK2_001091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001091 DBLQKW010000020.1 Protein Homology CDS 12010 12654 . - 0 ID=cds-HIH2231738.1;Parent=gene-ACYKK2_001091;Dbxref=NCBI_GP:HIH2231738.1;Name=HIH2231738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002890434.1;locus_tag=ACYKK2_001091;product=outer membrane beta-barrel protein;protein_id=HIH2231738.1;transl_table=11 DBLQKW010000020.1 tpg gene 12792 13175 . - . ID=gene-ACYKK2_001092;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=ACYKK2_001092 DBLQKW010000020.1 Protein Homology CDS 12792 13175 . - 0 ID=cds-HIH2231739.1;Parent=gene-ACYKK2_001092;Dbxref=NCBI_GP:HIH2231739.1;Name=HIH2231739.1;Ontology_term=GO:0008616,GO:0033739,GO:0046857,GO:0005737;gbkey=CDS;gene=queF;go_component=cytoplasm|0005737||IEA;go_function=preQ1 synthase activity|0033739||IEA,oxidoreductase activity%2C acting on other nitrogenous compounds as donors%2C with NAD or NADP as acceptor|0046857||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345090.1;locus_tag=ACYKK2_001092;product=preQ(1) synthase;protein_id=HIH2231739.1;transl_table=11 DBLQKW010000020.1 tpg gene 13335 13934 . + . ID=gene-ACYKK2_001093;Name=ACYKK2_001093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001093 DBLQKW010000020.1 Protein Homology CDS 13335 13934 . + 0 ID=cds-HIH2231740.1;Parent=gene-ACYKK2_001093;Dbxref=NCBI_GP:HIH2231740.1;Name=HIH2231740.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345091.1;locus_tag=ACYKK2_001093;product=FAD-dependent oxidoreductase;protein_id=HIH2231740.1;transl_table=11 DBLQKW010000020.1 tpg gene 13939 14820 . - . ID=gene-ACYKK2_001094;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=ACYKK2_001094 DBLQKW010000020.1 Protein Homology CDS 13939 14820 . - 0 ID=cds-HIH2231741.1;Parent=gene-ACYKK2_001094;Dbxref=NCBI_GP:HIH2231741.1;Name=HIH2231741.1;gbkey=CDS;gene=metA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345092.1;locus_tag=ACYKK2_001094;product=homoserine O-acetyltransferase/O-succinyltransferase family protein;protein_id=HIH2231741.1;transl_table=11 DBLQKW010000020.1 tpg gene 14903 16174 . - . ID=gene-ACYKK2_001095;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=ACYKK2_001095 DBLQKW010000020.1 Protein Homology CDS 14903 16174 . - 0 ID=cds-HIH2231742.1;Parent=gene-ACYKK2_001095;Dbxref=NCBI_GP:HIH2231742.1;Name=HIH2231742.1;gbkey=CDS;gene=metB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345093.1;locus_tag=ACYKK2_001095;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase;protein_id=HIH2231742.1;transl_table=11 DBLQKW010000020.1 tpg gene 16600 19158 . - . ID=gene-ACYKK2_001096;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=ACYKK2_001096 DBLQKW010000020.1 Protein Homology CDS 16600 19158 . - 0 ID=cds-HIH2231743.1;Parent=gene-ACYKK2_001096;Dbxref=NCBI_GP:HIH2231743.1;Name=HIH2231743.1;Ontology_term=GO:0044781,GO:0009288;gbkey=CDS;gene=flgE;go_component=bacterial-type flagellum|0009288||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345095.1;locus_tag=ACYKK2_001096;product=flagellar hook protein FlgE;protein_id=HIH2231743.1;transl_table=11 DBLQKW010000020.1 tpg gene 19362 19844 . - . ID=gene-ACYKK2_001097;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=ACYKK2_001097 DBLQKW010000020.1 Protein Homology CDS 19362 19844 . - 0 ID=cds-HIH2231744.1;Parent=gene-ACYKK2_001097;Dbxref=NCBI_GP:HIH2231744.1;Name=HIH2231744.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345096.1;locus_tag=ACYKK2_001097;product=crossover junction endodeoxyribonuclease RuvC;protein_id=HIH2231744.1;transl_table=11 DBLQKW010000020.1 tpg gene 19940 21262 . + . ID=gene-ACYKK2_001098;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=ACYKK2_001098 DBLQKW010000020.1 Protein Homology CDS 19940 21262 . + 0 ID=cds-HIH2231745.1;Parent=gene-ACYKK2_001098;Dbxref=NCBI_GP:HIH2231745.1;Name=HIH2231745.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343473.1;locus_tag=ACYKK2_001098;product=chromosomal replication initiator protein DnaA;protein_id=HIH2231745.1;transl_table=11 DBLQKW010000020.1 tpg gene 21422 22489 . + . ID=gene-ACYKK2_001099;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=ACYKK2_001099 DBLQKW010000020.1 Protein Homology CDS 21422 22489 . + 0 ID=cds-HIH2231746.1;Parent=gene-ACYKK2_001099;Dbxref=NCBI_GP:HIH2231746.1;Name=HIH2231746.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343474.1;locus_tag=ACYKK2_001099;product=DNA polymerase III subunit beta;protein_id=HIH2231746.1;transl_table=11 DBLQKW010000020.1 tpg gene 22518 24827 . + . ID=gene-ACYKK2_001100;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=ACYKK2_001100 DBLQKW010000020.1 Protein Homology CDS 22518 24827 . + 0 ID=cds-HIH2231747.1;Parent=gene-ACYKK2_001100;Dbxref=NCBI_GP:HIH2231747.1;Name=HIH2231747.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343475.1;locus_tag=ACYKK2_001100;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=HIH2231747.1;transl_table=11 DBLQKW010000020.1 tpg gene 24853 25194 . - . ID=gene-ACYKK2_001101;Name=sorB;gbkey=Gene;gene=sorB;gene_biotype=protein_coding;locus_tag=ACYKK2_001101 DBLQKW010000020.1 Protein Homology CDS 24853 25194 . - 0 ID=cds-HIH2231748.1;Parent=gene-ACYKK2_001101;Dbxref=NCBI_GP:HIH2231748.1;Name=HIH2231748.1;gbkey=CDS;gene=sorB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343476.1;locus_tag=ACYKK2_001101;product=sulfite:cytochrome c oxidoreductase monoheme cytochrome C subunit;protein_id=HIH2231748.1;transl_table=11 DBLQKW010000020.1 tpg gene 25197 26435 . - . ID=gene-ACYKK2_001102;Name=sorA;gbkey=Gene;gene=sorA;gene_biotype=protein_coding;locus_tag=ACYKK2_001102 DBLQKW010000020.1 Protein Homology CDS 25197 26435 . - 0 ID=cds-HIH2231749.1;Parent=gene-ACYKK2_001102;Dbxref=NCBI_GP:HIH2231749.1;Name=HIH2231749.1;gbkey=CDS;gene=sorA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343477.1;locus_tag=ACYKK2_001102;product=sulfite:cytochrome c oxidoreductase molybdopterin oxidoreductase subunit;protein_id=HIH2231749.1;transl_table=11 ##sequence-region DBLQKW010000021.1 1 24715 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000021.1 tpg region 1 24715 . + . ID=DBLQKW010000021.1:1..24715;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000021.1 tpg gene 25 450 . + . ID=gene-ACYKK2_001103;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=ACYKK2_001103 DBLQKW010000021.1 Protein Homology CDS 25 450 . + 0 ID=cds-HIH2231750.1;Parent=gene-ACYKK2_001103;Dbxref=NCBI_GP:HIH2231750.1;Name=HIH2231750.1;Ontology_term=GO:0055085,GO:0015078,GO:0016020;gbkey=CDS;gene=exbB;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344997.1;locus_tag=ACYKK2_001103;product=TonB-system energizer ExbB;protein_id=HIH2231750.1;transl_table=11 DBLQKW010000021.1 tpg gene 443 832 . + . ID=gene-ACYKK2_001104;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=ACYKK2_001104 DBLQKW010000021.1 Protein Homology CDS 443 832 . + 0 ID=cds-HIH2231751.1;Parent=gene-ACYKK2_001104;Dbxref=NCBI_GP:HIH2231751.1;Name=HIH2231751.1;Ontology_term=GO:0006810,GO:0015291,GO:0016020;gbkey=CDS;gene=exbD;go_component=membrane|0016020||IEA;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344998.1;locus_tag=ACYKK2_001104;product=TonB system transport protein ExbD;protein_id=HIH2231751.1;transl_table=11 DBLQKW010000021.1 tpg pseudogene 829 1511 . + . ID=gene-ACYKK2_001105;Name=ACYKK2_001105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001105;pseudo=true DBLQKW010000021.1 Protein Homology CDS 829 1511 . + 0 ID=cds-ACYKK2_001105;Parent=gene-ACYKK2_001105;Note=frameshifted;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344999.1;locus_tag=ACYKK2_001105;product=TonB family protein;pseudo=true;transl_table=11 DBLQKW010000021.1 tpg gene 1524 2393 . - . ID=gene-ACYKK2_001106;Name=ACYKK2_001106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001106 DBLQKW010000021.1 Protein Homology CDS 1524 2393 . - 0 ID=cds-HIH2231752.1;Parent=gene-ACYKK2_001106;Dbxref=NCBI_GP:HIH2231752.1;Name=HIH2231752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345000.1;locus_tag=ACYKK2_001106;product=hypothetical protein;protein_id=HIH2231752.1;transl_table=11 DBLQKW010000021.1 tpg gene 2397 2558 . - . ID=gene-ACYKK2_001107;Name=ACYKK2_001107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001107 DBLQKW010000021.1 Protein Homology CDS 2397 2558 . - 0 ID=cds-HIH2231753.1;Parent=gene-ACYKK2_001107;Dbxref=NCBI_GP:HIH2231753.1;Name=HIH2231753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345001.1;locus_tag=ACYKK2_001107;product=hypothetical protein;protein_id=HIH2231753.1;transl_table=11 DBLQKW010000021.1 tpg gene 2653 3636 . + . ID=gene-ACYKK2_001108;Name=ACYKK2_001108;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001108 DBLQKW010000021.1 Protein Homology CDS 2653 3636 . + 0 ID=cds-HIH2231754.1;Parent=gene-ACYKK2_001108;Dbxref=NCBI_GP:HIH2231754.1;Name=HIH2231754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345002.1;locus_tag=ACYKK2_001108;product=ATP-binding protein;protein_id=HIH2231754.1;transl_table=11 DBLQKW010000021.1 tpg gene 3722 4810 . - . ID=gene-ACYKK2_001109;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=ACYKK2_001109 DBLQKW010000021.1 Protein Homology CDS 3722 4810 . - 0 ID=cds-HIH2231755.1;Parent=gene-ACYKK2_001109;Dbxref=NCBI_GP:HIH2231755.1;Name=HIH2231755.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345003.1;locus_tag=ACYKK2_001109;product=chorismate synthase;protein_id=HIH2231755.1;transl_table=11 DBLQKW010000021.1 tpg gene 4810 5484 . - . ID=gene-ACYKK2_001110;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=ACYKK2_001110 DBLQKW010000021.1 Protein Homology CDS 4810 5484 . - 0 ID=cds-HIH2231756.1;Parent=gene-ACYKK2_001110;Dbxref=NCBI_GP:HIH2231756.1;Name=HIH2231756.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345004.1;locus_tag=ACYKK2_001110;product=ribonuclease III;protein_id=HIH2231756.1;transl_table=11 DBLQKW010000021.1 tpg gene 5471 5911 . - . ID=gene-ACYKK2_001111;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=ACYKK2_001111 DBLQKW010000021.1 Protein Homology CDS 5471 5911 . - 0 ID=cds-HIH2231757.1;Parent=gene-ACYKK2_001111;Dbxref=NCBI_GP:HIH2231757.1;Name=HIH2231757.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345005.1;locus_tag=ACYKK2_001111;product=ribonuclease HI;protein_id=HIH2231757.1;transl_table=11 DBLQKW010000021.1 tpg gene 5898 6884 . - . ID=gene-ACYKK2_001112;Name=ACYKK2_001112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001112 DBLQKW010000021.1 Protein Homology CDS 5898 6884 . - 0 ID=cds-HIH2231758.1;Parent=gene-ACYKK2_001112;Dbxref=NCBI_GP:HIH2231758.1;Name=HIH2231758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345006.1;locus_tag=ACYKK2_001112;product=CDC27 family protein;protein_id=HIH2231758.1;transl_table=11 DBLQKW010000021.1 tpg gene 6954 8771 . + . ID=gene-ACYKK2_001113;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=ACYKK2_001113 DBLQKW010000021.1 Protein Homology CDS 6954 8771 . + 0 ID=cds-HIH2231759.1;Parent=gene-ACYKK2_001113;Dbxref=NCBI_GP:HIH2231759.1;Name=HIH2231759.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345007.1;locus_tag=ACYKK2_001113;product=DNA primase;protein_id=HIH2231759.1;transl_table=11 DBLQKW010000021.1 tpg gene 8853 9125 . + . ID=gene-ACYKK2_001114;Name=ACYKK2_001114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001114 DBLQKW010000021.1 Protein Homology CDS 8853 9125 . + 0 ID=cds-HIH2231760.1;Parent=gene-ACYKK2_001114;Dbxref=NCBI_GP:HIH2231760.1;Name=HIH2231760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345008.1;locus_tag=ACYKK2_001114;product=NifU family protein;protein_id=HIH2231760.1;transl_table=11 DBLQKW010000021.1 tpg gene 9112 9663 . + . ID=gene-ACYKK2_001115;Name=ACYKK2_001115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001115 DBLQKW010000021.1 Protein Homology CDS 9112 9663 . + 0 ID=cds-HIH2231761.1;Parent=gene-ACYKK2_001115;Dbxref=NCBI_GP:HIH2231761.1;Name=HIH2231761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345009.1;locus_tag=ACYKK2_001115;product=histidine kinase;protein_id=HIH2231761.1;transl_table=11 DBLQKW010000021.1 tpg gene 9647 10930 . + . ID=gene-ACYKK2_001116;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=ACYKK2_001116 DBLQKW010000021.1 Protein Homology CDS 9647 10930 . + 0 ID=cds-HIH2231762.1;Parent=gene-ACYKK2_001116;Dbxref=NCBI_GP:HIH2231762.1;Name=HIH2231762.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016874;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345010.1;locus_tag=ACYKK2_001116;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=HIH2231762.1;transl_table=11 DBLQKW010000021.1 tpg gene 10934 11245 . + . ID=gene-ACYKK2_001117;Name=ACYKK2_001117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001117 DBLQKW010000021.1 Protein Homology CDS 10934 11245 . + 0 ID=cds-HIH2231763.1;Parent=gene-ACYKK2_001117;Dbxref=NCBI_GP:HIH2231763.1;Name=HIH2231763.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345011.1;locus_tag=ACYKK2_001117;product=YbaB/EbfC family nucleoid-associated protein;protein_id=HIH2231763.1;transl_table=11 DBLQKW010000021.1 tpg gene 11242 12336 . + . ID=gene-ACYKK2_001118;Name=ACYKK2_001118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001118 DBLQKW010000021.1 Protein Homology CDS 11242 12336 . + 0 ID=cds-HIH2231764.1;Parent=gene-ACYKK2_001118;Dbxref=NCBI_GP:HIH2231764.1;Name=HIH2231764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345012.1;locus_tag=ACYKK2_001118;product=DUF7488 domain-containing protein;protein_id=HIH2231764.1;transl_table=11 DBLQKW010000021.1 tpg gene 12333 13178 . + . ID=gene-ACYKK2_001119;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=ACYKK2_001119 DBLQKW010000021.1 Protein Homology CDS 12333 13178 . + 0 ID=cds-HIH2231765.1;Parent=gene-ACYKK2_001119;Dbxref=NCBI_GP:HIH2231765.1;Name=HIH2231765.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;gene=ispA;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345013.1;locus_tag=ACYKK2_001119;product=polyprenyl synthetase family protein;protein_id=HIH2231765.1;transl_table=11 DBLQKW010000021.1 tpg gene 13188 15086 . + . ID=gene-ACYKK2_001120;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=ACYKK2_001120 DBLQKW010000021.1 Protein Homology CDS 13188 15086 . + 0 ID=cds-HIH2231766.1;Parent=gene-ACYKK2_001120;Dbxref=NCBI_GP:HIH2231766.1;Name=HIH2231766.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345014.1;locus_tag=ACYKK2_001120;product=transketolase;protein_id=HIH2231766.1;transl_table=11 DBLQKW010000021.1 tpg gene 15088 16197 . + . ID=gene-ACYKK2_001121;Name=iamB;gbkey=Gene;gene=iamB;gene_biotype=protein_coding;locus_tag=ACYKK2_001121 DBLQKW010000021.1 Protein Homology CDS 15088 16197 . + 0 ID=cds-HIH2231767.1;Parent=gene-ACYKK2_001121;Dbxref=NCBI_GP:HIH2231767.1;Name=HIH2231767.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;gene=iamB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345015.1;locus_tag=ACYKK2_001121;product=ABC transporter permease;protein_id=HIH2231767.1;transl_table=11 DBLQKW010000021.1 tpg gene 16198 16920 . + . ID=gene-ACYKK2_001122;Name=iamA;gbkey=Gene;gene=iamA;gene_biotype=protein_coding;locus_tag=ACYKK2_001122 DBLQKW010000021.1 Protein Homology CDS 16198 16920 . + 0 ID=cds-HIH2231768.1;Parent=gene-ACYKK2_001122;Dbxref=NCBI_GP:HIH2231768.1;Name=HIH2231768.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=iamA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345016.1;locus_tag=ACYKK2_001122;product=ABC transporter ATP-binding protein;protein_id=HIH2231768.1;transl_table=11 DBLQKW010000021.1 tpg gene 16923 17813 . + . ID=gene-ACYKK2_001123;Name=ACYKK2_001123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001123 DBLQKW010000021.1 Protein Homology CDS 16923 17813 . + 0 ID=cds-HIH2231769.1;Parent=gene-ACYKK2_001123;Dbxref=NCBI_GP:HIH2231769.1;Name=HIH2231769.1;Ontology_term=GO:0015914;gbkey=CDS;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345017.1;locus_tag=ACYKK2_001123;product=MlaD family protein;protein_id=HIH2231769.1;transl_table=11 DBLQKW010000021.1 tpg gene 17813 18412 . + . ID=gene-ACYKK2_001124;Name=ACYKK2_001124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001124 DBLQKW010000021.1 Protein Homology CDS 17813 18412 . + 0 ID=cds-HIH2231770.1;Parent=gene-ACYKK2_001124;Dbxref=NCBI_GP:HIH2231770.1;Name=HIH2231770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345018.1;locus_tag=ACYKK2_001124;product=ABC-type transport auxiliary lipoprotein family protein;protein_id=HIH2231770.1;transl_table=11 DBLQKW010000021.1 tpg gene 18468 18968 . + . ID=gene-ACYKK2_001125;Name=ACYKK2_001125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001125 DBLQKW010000021.1 Protein Homology CDS 18468 18968 . + 0 ID=cds-HIH2231771.1;Parent=gene-ACYKK2_001125;Dbxref=NCBI_GP:HIH2231771.1;Name=HIH2231771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345019.1;locus_tag=ACYKK2_001125;product=flagellar FLiS export co-chaperone;protein_id=HIH2231771.1;transl_table=11 DBLQKW010000021.1 tpg gene 19337 20095 . - . ID=gene-ACYKK2_001126;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=ACYKK2_001126 DBLQKW010000021.1 Protein Homology CDS 19337 20095 . - 0 ID=cds-HIH2231772.1;Parent=gene-ACYKK2_001126;Dbxref=NCBI_GP:HIH2231772.1;Name=HIH2231772.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345020.1;locus_tag=ACYKK2_001126;product=type I methionyl aminopeptidase;protein_id=HIH2231772.1;transl_table=11 DBLQKW010000021.1 tpg gene 20105 20848 . - . ID=gene-ACYKK2_001127;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=ACYKK2_001127 DBLQKW010000021.1 Protein Homology CDS 20105 20848 . - 0 ID=cds-HIH2231773.1;Parent=gene-ACYKK2_001127;Dbxref=NCBI_GP:HIH2231773.1;Name=HIH2231773.1;Ontology_term=GO:0009252,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002870107.1;locus_tag=ACYKK2_001127;product=glutamate racemase;protein_id=HIH2231773.1;transl_table=11 DBLQKW010000021.1 tpg gene 20850 21308 . - . ID=gene-ACYKK2_001128;Name=ACYKK2_001128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001128 DBLQKW010000021.1 Protein Homology CDS 20850 21308 . - 0 ID=cds-HIH2231774.1;Parent=gene-ACYKK2_001128;Dbxref=NCBI_GP:HIH2231774.1;Name=HIH2231774.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345022.1;locus_tag=ACYKK2_001128;product=C40 family peptidase;protein_id=HIH2231774.1;transl_table=11 DBLQKW010000021.1 tpg gene 21317 22486 . - . ID=gene-ACYKK2_001129;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=ACYKK2_001129 DBLQKW010000021.1 Protein Homology CDS 21317 22486 . - 0 ID=cds-HIH2231775.1;Parent=gene-ACYKK2_001129;Dbxref=NCBI_GP:HIH2231775.1;Name=HIH2231775.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345023.1;locus_tag=ACYKK2_001129;product=Na+/H+ antiporter NhaA;protein_id=HIH2231775.1;transl_table=11 DBLQKW010000021.1 tpg gene 22483 23631 . - . ID=gene-ACYKK2_001130;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=ACYKK2_001130 DBLQKW010000021.1 Protein Homology CDS 22483 23631 . - 0 ID=cds-HIH2231776.1;Parent=gene-ACYKK2_001130;Dbxref=NCBI_GP:HIH2231776.1;Name=HIH2231776.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345024.1;locus_tag=ACYKK2_001130;product=Na+/H+ antiporter NhaA;protein_id=HIH2231776.1;transl_table=11 DBLQKW010000021.1 tpg gene 23774 23956 . - . ID=gene-ACYKK2_001131;Name=ACYKK2_001131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001131 DBLQKW010000021.1 Protein Homology CDS 23774 23956 . - 0 ID=cds-HIH2231777.1;Parent=gene-ACYKK2_001131;Dbxref=NCBI_GP:HIH2231777.1;Name=HIH2231777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345025.1;locus_tag=ACYKK2_001131;product=YjfB family protein;protein_id=HIH2231777.1;transl_table=11 DBLQKW010000021.1 tpg gene 24279 24482 . + . ID=gene-ACYKK2_001132;Name=ACYKK2_001132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001132 DBLQKW010000021.1 Protein Homology CDS 24279 24482 . + 0 ID=cds-HIH2231778.1;Parent=gene-ACYKK2_001132;Dbxref=NCBI_GP:HIH2231778.1;Name=HIH2231778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002866842.1;locus_tag=ACYKK2_001132;product=hypothetical protein;protein_id=HIH2231778.1;transl_table=11 ##sequence-region DBLQKW010000022.1 1 23435 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000022.1 tpg region 1 23435 . + . ID=DBLQKW010000022.1:1..23435;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000022.1 tpg gene 47 823 . + . ID=gene-ACYKK2_001133;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=ACYKK2_001133 DBLQKW010000022.1 Protein Homology CDS 47 823 . + 0 ID=cds-HIH2231779.1;Parent=gene-ACYKK2_001133;Dbxref=NCBI_GP:HIH2231779.1;Name=HIH2231779.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343731.1;locus_tag=ACYKK2_001133;product=5'/3'-nucleotidase SurE;protein_id=HIH2231779.1;transl_table=11 DBLQKW010000022.1 tpg gene 813 1466 . + . ID=gene-ACYKK2_001134;Name=ACYKK2_001134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001134 DBLQKW010000022.1 Protein Homology CDS 813 1466 . + 0 ID=cds-HIH2231780.1;Parent=gene-ACYKK2_001134;Dbxref=NCBI_GP:HIH2231780.1;Name=HIH2231780.1;Ontology_term=GO:0008641;gbkey=CDS;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011812701.1;locus_tag=ACYKK2_001134;product=ThiF family adenylyltransferase;protein_id=HIH2231780.1;transl_table=11 DBLQKW010000022.1 tpg gene 1541 1921 . - . ID=gene-ACYKK2_001135;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=ACYKK2_001135 DBLQKW010000022.1 Protein Homology CDS 1541 1921 . - 0 ID=cds-HIH2231781.1;Parent=gene-ACYKK2_001135;Dbxref=NCBI_GP:HIH2231781.1;Name=HIH2231781.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343734.1;locus_tag=ACYKK2_001135;product=aspartate 1-decarboxylase;protein_id=HIH2231781.1;transl_table=11 DBLQKW010000022.1 tpg gene 1918 2766 . - . ID=gene-ACYKK2_001136;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=ACYKK2_001136 DBLQKW010000022.1 Protein Homology CDS 1918 2766 . - 0 ID=cds-HIH2231782.1;Parent=gene-ACYKK2_001136;Dbxref=NCBI_GP:HIH2231782.1;Name=HIH2231782.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343735.1;locus_tag=ACYKK2_001136;product=pantoate--beta-alanine ligase;protein_id=HIH2231782.1;transl_table=11 DBLQKW010000022.1 tpg gene 2777 3601 . - . ID=gene-ACYKK2_001137;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=ACYKK2_001137 DBLQKW010000022.1 Protein Homology CDS 2777 3601 . - 0 ID=cds-HIH2231783.1;Parent=gene-ACYKK2_001137;Dbxref=NCBI_GP:HIH2231783.1;Name=HIH2231783.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343736.1;locus_tag=ACYKK2_001137;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=HIH2231783.1;transl_table=11 DBLQKW010000022.1 tpg gene 3755 4645 . - . ID=gene-ACYKK2_001138;Name=ACYKK2_001138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001138 DBLQKW010000022.1 Protein Homology CDS 3755 4645 . - 0 ID=cds-HIH2231784.1;Parent=gene-ACYKK2_001138;Dbxref=NCBI_GP:HIH2231784.1;Name=HIH2231784.1;Ontology_term=GO:0005524,GO:0015419,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002860319.1;locus_tag=ACYKK2_001138;product=sulfate/molybdate ABC transporter ATP-binding protein;protein_id=HIH2231784.1;transl_table=11 DBLQKW010000022.1 tpg gene 4655 5323 . - . ID=gene-ACYKK2_001139;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=ACYKK2_001139 DBLQKW010000022.1 Protein Homology CDS 4655 5323 . - 0 ID=cds-HIH2231785.1;Parent=gene-ACYKK2_001139;Dbxref=NCBI_GP:HIH2231785.1;Name=HIH2231785.1;Ontology_term=GO:0015689,GO:0015412,GO:0005886,GO:0055052;gbkey=CDS;gene=modB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002854336.1;locus_tag=ACYKK2_001139;product=molybdate ABC transporter permease subunit;protein_id=HIH2231785.1;transl_table=11 DBLQKW010000022.1 tpg gene 5316 5717 . - . ID=gene-ACYKK2_001140;Name=ACYKK2_001140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001140 DBLQKW010000022.1 Protein Homology CDS 5316 5717 . - 0 ID=cds-HIH2231786.1;Parent=gene-ACYKK2_001140;Dbxref=NCBI_GP:HIH2231786.1;Name=HIH2231786.1;Ontology_term=GO:0015689;gbkey=CDS;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002778137.1;locus_tag=ACYKK2_001140;product=TOBE domain-containing protein;protein_id=HIH2231786.1;transl_table=11 DBLQKW010000022.1 tpg gene 5714 6463 . - . ID=gene-ACYKK2_001141;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=ACYKK2_001141 DBLQKW010000022.1 Protein Homology CDS 5714 6463 . - 0 ID=cds-HIH2231787.1;Parent=gene-ACYKK2_001141;Dbxref=NCBI_GP:HIH2231787.1;Name=HIH2231787.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002934910.1;locus_tag=ACYKK2_001141;product=molybdate ABC transporter substrate-binding protein;protein_id=HIH2231787.1;transl_table=11 DBLQKW010000022.1 tpg gene 6517 7203 . - . ID=gene-ACYKK2_001142;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=ACYKK2_001142 DBLQKW010000022.1 Protein Homology CDS 6517 7203 . - 0 ID=cds-HIH2231788.1;Parent=gene-ACYKK2_001142;Dbxref=NCBI_GP:HIH2231788.1;Name=HIH2231788.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343742.1;locus_tag=ACYKK2_001142;product=malonyl-ACP O-methyltransferase BioC;protein_id=HIH2231788.1;transl_table=11 DBLQKW010000022.1 tpg gene 7200 7811 . - . ID=gene-ACYKK2_001143;Name=ACYKK2_001143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001143 DBLQKW010000022.1 Protein Homology CDS 7200 7811 . - 0 ID=cds-HIH2231789.1;Parent=gene-ACYKK2_001143;Dbxref=NCBI_GP:HIH2231789.1;Name=HIH2231789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002834455.1;locus_tag=ACYKK2_001143;product=pimeloyl-ACP methyl esterase BioG family protein;protein_id=HIH2231789.1;transl_table=11 DBLQKW010000022.1 tpg gene 7808 8950 . - . ID=gene-ACYKK2_001144;Name=ACYKK2_001144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001144 DBLQKW010000022.1 Protein Homology CDS 7808 8950 . - 0 ID=cds-HIH2231790.1;Parent=gene-ACYKK2_001144;Dbxref=NCBI_GP:HIH2231790.1;Name=HIH2231790.1;Ontology_term=GO:0016747,GO:0030170;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343744.1;locus_tag=ACYKK2_001144;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=HIH2231790.1;transl_table=11 DBLQKW010000022.1 tpg gene 9017 10300 . + . ID=gene-ACYKK2_001145;Name=ACYKK2_001145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001145 DBLQKW010000022.1 Protein Homology CDS 9017 10300 . + 0 ID=cds-HIH2231791.1;Parent=gene-ACYKK2_001145;Dbxref=NCBI_GP:HIH2231791.1;Name=HIH2231791.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343745.1;locus_tag=ACYKK2_001145;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=HIH2231791.1;transl_table=11 DBLQKW010000022.1 tpg gene 10287 10892 . - . ID=gene-ACYKK2_001146;Name=ACYKK2_001146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001146 DBLQKW010000022.1 Protein Homology CDS 10287 10892 . - 0 ID=cds-HIH2231792.1;Parent=gene-ACYKK2_001146;Dbxref=NCBI_GP:HIH2231792.1;Name=HIH2231792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343746.1;locus_tag=ACYKK2_001146;product=dethiobiotin synthase;protein_id=HIH2231792.1;transl_table=11 DBLQKW010000022.1 tpg gene 10902 11216 . - . ID=gene-ACYKK2_001147;Name=ACYKK2_001147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001147 DBLQKW010000022.1 Protein Homology CDS 10902 11216 . - 0 ID=cds-HIH2231793.1;Parent=gene-ACYKK2_001147;Dbxref=NCBI_GP:HIH2231793.1;Name=HIH2231793.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343747.1;locus_tag=ACYKK2_001147;product=DMT family transporter;protein_id=HIH2231793.1;transl_table=11 DBLQKW010000022.1 tpg gene 11219 11557 . - . ID=gene-ACYKK2_001148;Name=ACYKK2_001148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001148 DBLQKW010000022.1 Protein Homology CDS 11219 11557 . - 0 ID=cds-HIH2231794.1;Parent=gene-ACYKK2_001148;Dbxref=NCBI_GP:HIH2231794.1;Name=HIH2231794.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343748.1;locus_tag=ACYKK2_001148;product=DMT family transporter;protein_id=HIH2231794.1;transl_table=11 DBLQKW010000022.1 tpg gene 11691 12227 . + . ID=gene-ACYKK2_001149;Name=ACYKK2_001149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001149 DBLQKW010000022.1 Protein Homology CDS 11691 12227 . + 0 ID=cds-HIH2231795.1;Parent=gene-ACYKK2_001149;Dbxref=NCBI_GP:HIH2231795.1;Name=HIH2231795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343749.1;locus_tag=ACYKK2_001149;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=HIH2231795.1;transl_table=11 DBLQKW010000022.1 tpg gene 12224 12769 . + . ID=gene-ACYKK2_001150;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=ACYKK2_001150 DBLQKW010000022.1 Protein Homology CDS 12224 12769 . + 0 ID=cds-HIH2231796.1;Parent=gene-ACYKK2_001150;Dbxref=NCBI_GP:HIH2231796.1;Name=HIH2231796.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343750.1;locus_tag=ACYKK2_001150;product=aminoacyl-tRNA hydrolase;protein_id=HIH2231796.1;transl_table=11 DBLQKW010000022.1 tpg gene 12771 13829 . + . ID=gene-ACYKK2_001151;Name=ACYKK2_001151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001151 DBLQKW010000022.1 Protein Homology CDS 12771 13829 . + 0 ID=cds-HIH2231797.1;Parent=gene-ACYKK2_001151;Dbxref=NCBI_GP:HIH2231797.1;Name=HIH2231797.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343751.1;locus_tag=ACYKK2_001151;product=LptF/LptG family permease;protein_id=HIH2231797.1;transl_table=11 DBLQKW010000022.1 tpg gene 13873 15081 . + . ID=gene-ACYKK2_001152;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=ACYKK2_001152 DBLQKW010000022.1 Protein Homology CDS 13873 15081 . + 0 ID=cds-HIH2231798.1;Parent=gene-ACYKK2_001152;Dbxref=NCBI_GP:HIH2231798.1;Name=HIH2231798.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343752.1;locus_tag=ACYKK2_001152;product=diaminopimelate decarboxylase;protein_id=HIH2231798.1;transl_table=11 DBLQKW010000022.1 tpg gene 15083 15850 . + . ID=gene-ACYKK2_001153;Name=ACYKK2_001153;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001153 DBLQKW010000022.1 Protein Homology CDS 15083 15850 . + 0 ID=cds-HIH2231799.1;Parent=gene-ACYKK2_001153;Dbxref=NCBI_GP:HIH2231799.1;Name=HIH2231799.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343753.1;locus_tag=ACYKK2_001153;product=HAD-IIA family hydrolase;protein_id=HIH2231799.1;transl_table=11 DBLQKW010000022.1 tpg gene 15838 16911 . + . ID=gene-ACYKK2_001154;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=ACYKK2_001154 DBLQKW010000022.1 Protein Homology CDS 15838 16911 . + 0 ID=cds-HIH2231800.1;Parent=gene-ACYKK2_001154;Dbxref=NCBI_GP:HIH2231800.1;Name=HIH2231800.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343754.1;locus_tag=ACYKK2_001154;product=prephenate dehydratase;protein_id=HIH2231800.1;transl_table=11 DBLQKW010000022.1 tpg gene 16901 17995 . + . ID=gene-ACYKK2_001155;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=ACYKK2_001155 DBLQKW010000022.1 Protein Homology CDS 16901 17995 . + 0 ID=cds-HIH2231801.1;Parent=gene-ACYKK2_001155;Dbxref=NCBI_GP:HIH2231801.1;Name=HIH2231801.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343755.1;locus_tag=ACYKK2_001155;product=histidinol-phosphate transaminase;protein_id=HIH2231801.1;transl_table=11 DBLQKW010000022.1 tpg gene 18047 19729 . + . ID=gene-ACYKK2_001156;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=ACYKK2_001156 DBLQKW010000022.1 Protein Homology CDS 18047 19729 . + 0 ID=cds-HIH2231802.1;Parent=gene-ACYKK2_001156;Dbxref=NCBI_GP:HIH2231802.1;Name=HIH2231802.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343756.1;locus_tag=ACYKK2_001156;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=HIH2231802.1;transl_table=11 DBLQKW010000022.1 tpg gene 19729 20757 . + . ID=gene-ACYKK2_001157;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=ACYKK2_001157 DBLQKW010000022.1 Protein Homology CDS 19729 20757 . + 0 ID=cds-HIH2231803.1;Parent=gene-ACYKK2_001157;Dbxref=NCBI_GP:HIH2231803.1;Name=HIH2231803.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343757.1;locus_tag=ACYKK2_001157;product=flagellar motor switch protein FliG;protein_id=HIH2231803.1;transl_table=11 DBLQKW010000022.1 tpg gene 20765 21595 . + . ID=gene-ACYKK2_001158;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=ACYKK2_001158 DBLQKW010000022.1 Protein Homology CDS 20765 21595 . + 0 ID=cds-HIH2231804.1;Parent=gene-ACYKK2_001158;Dbxref=NCBI_GP:HIH2231804.1;Name=HIH2231804.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343758.1;locus_tag=ACYKK2_001158;product=flagellar assembly protein FliH;protein_id=HIH2231804.1;transl_table=11 DBLQKW010000022.1 tpg gene 21588 23435 . + . ID=gene-ACYKK2_001159;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=ACYKK2_001159 DBLQKW010000022.1 Protein Homology CDS 21588 23435 . + 0 ID=cds-HIH2231805.1;Parent=gene-ACYKK2_001159;Dbxref=NCBI_GP:HIH2231805.1;Name=HIH2231805.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343759.1;locus_tag=ACYKK2_001159;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=HIH2231805.1;transl_table=11 ##sequence-region DBLQKW010000023.1 1 23345 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000023.1 tpg region 1 23345 . + . ID=DBLQKW010000023.1:1..23345;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000023.1 tpg gene 1 696 . + . ID=gene-ACYKK2_001160;Name=ACYKK2_001160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001160;partial=true;start_range=.,1 DBLQKW010000023.1 Protein Homology CDS 1 696 . + 0 ID=cds-HIH2231806.1;Parent=gene-ACYKK2_001160;Dbxref=NCBI_GP:HIH2231806.1;Name=HIH2231806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343512.1;locus_tag=ACYKK2_001160;partial=true;product=flagellar hook-length control protein FliK;protein_id=HIH2231806.1;start_range=.,1;transl_table=11 DBLQKW010000023.1 tpg gene 750 1634 . + . ID=gene-ACYKK2_001161;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=ACYKK2_001161 DBLQKW010000023.1 Protein Homology CDS 750 1634 . + 0 ID=cds-HIH2231807.1;Parent=gene-ACYKK2_001161;Dbxref=NCBI_GP:HIH2231807.1;Name=HIH2231807.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343513.1;locus_tag=ACYKK2_001161;product=flagellar basal body rod modification protein;protein_id=HIH2231807.1;transl_table=11 DBLQKW010000023.1 tpg gene 1638 3275 . + . ID=gene-ACYKK2_001162;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=ACYKK2_001162 DBLQKW010000023.1 Protein Homology CDS 1638 3275 . + 0 ID=cds-HIH2231808.1;Parent=gene-ACYKK2_001162;Dbxref=NCBI_GP:HIH2231808.1;Name=HIH2231808.1;Ontology_term=GO:0071973;gbkey=CDS;gene=flgE;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343514.1;locus_tag=ACYKK2_001162;product=flagellar hook protein FlgE;protein_id=HIH2231808.1;transl_table=11 DBLQKW010000023.1 tpg gene 3279 5150 . - . ID=gene-ACYKK2_001163;Name=ACYKK2_001163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001163 DBLQKW010000023.1 Protein Homology CDS 3279 5150 . - 0 ID=cds-HIH2231809.1;Parent=gene-ACYKK2_001163;Dbxref=NCBI_GP:HIH2231809.1;Name=HIH2231809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343515.1;locus_tag=ACYKK2_001163;product=flagellar assembly protein A;protein_id=HIH2231809.1;transl_table=11 DBLQKW010000023.1 tpg gene 5107 5871 . - . ID=gene-ACYKK2_001164;Name=ACYKK2_001164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001164 DBLQKW010000023.1 Protein Homology CDS 5107 5871 . - 0 ID=cds-HIH2231810.1;Parent=gene-ACYKK2_001164;Dbxref=NCBI_GP:HIH2231810.1;Name=HIH2231810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002873756.1;locus_tag=ACYKK2_001164;product=hemerythrin family protein;protein_id=HIH2231810.1;transl_table=11 DBLQKW010000023.1 tpg gene 6051 6148 . + . ID=gene-ACYKK2_001165;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=ACYKK2_001165 DBLQKW010000023.1 cmsearch SRP_RNA 6051 6148 . + . ID=rna-ACYKK2_001165;Parent=gene-ACYKK2_001165;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKK2_001165;product=signal recognition particle sRNA small type DBLQKW010000023.1 cmsearch exon 6051 6148 . + . ID=exon-ACYKK2_001165-1;Parent=rna-ACYKK2_001165;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKK2_001165;product=signal recognition particle sRNA small type DBLQKW010000023.1 tpg pseudogene 6304 6492 . + . ID=gene-ACYKK2_001166;Name=ACYKK2_001166;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001166;pseudo=true DBLQKW010000023.1 Protein Homology CDS 6304 6492 . + 0 ID=cds-ACYKK2_001166;Parent=gene-ACYKK2_001166;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002779304.1;locus_tag=ACYKK2_001166;product=anion permease;pseudo=true;transl_table=11 DBLQKW010000023.1 tpg gene 6681 7079 . + . ID=gene-ACYKK2_001167;Name=ACYKK2_001167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001167 DBLQKW010000023.1 Protein Homology CDS 6681 7079 . + 0 ID=cds-HIH2231811.1;Parent=gene-ACYKK2_001167;Dbxref=NCBI_GP:HIH2231811.1;Name=HIH2231811.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002858798.1;locus_tag=ACYKK2_001167;product=anion permease;protein_id=HIH2231811.1;transl_table=11 DBLQKW010000023.1 tpg gene 7133 7357 . + . ID=gene-ACYKK2_001168;Name=ACYKK2_001168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001168 DBLQKW010000023.1 Protein Homology CDS 7133 7357 . + 0 ID=cds-HIH2231812.1;Parent=gene-ACYKK2_001168;Dbxref=NCBI_GP:HIH2231812.1;Name=HIH2231812.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002888971.1;locus_tag=ACYKK2_001168;product=anion permease;protein_id=HIH2231812.1;transl_table=11 DBLQKW010000023.1 tpg gene 7368 7535 . + . ID=gene-ACYKK2_001169;Name=ACYKK2_001169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001169 DBLQKW010000023.1 Protein Homology CDS 7368 7535 . + 0 ID=cds-HIH2231813.1;Parent=gene-ACYKK2_001169;Dbxref=NCBI_GP:HIH2231813.1;Name=HIH2231813.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013132.6;locus_tag=ACYKK2_001169;product=anion permease;protein_id=HIH2231813.1;transl_table=11 DBLQKW010000023.1 tpg gene 7658 7903 . + . ID=gene-ACYKK2_001170;Name=ACYKK2_001170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001170 DBLQKW010000023.1 Protein Homology CDS 7658 7903 . + 0 ID=cds-HIH2231814.1;Parent=gene-ACYKK2_001170;Dbxref=NCBI_GP:HIH2231814.1;Name=HIH2231814.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002854233.1;locus_tag=ACYKK2_001170;product=anion permease;protein_id=HIH2231814.1;transl_table=11 DBLQKW010000023.1 tpg gene 7931 8947 . - . ID=gene-ACYKK2_001171;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=ACYKK2_001171 DBLQKW010000023.1 Protein Homology CDS 7931 8947 . - 0 ID=cds-HIH2231815.1;Parent=gene-ACYKK2_001171;Dbxref=NCBI_GP:HIH2231815.1;Name=HIH2231815.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343517.1;locus_tag=ACYKK2_001171;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=HIH2231815.1;transl_table=11 DBLQKW010000023.1 tpg gene 8947 9552 . - . ID=gene-ACYKK2_001172;Name=ACYKK2_001172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001172 DBLQKW010000023.1 Protein Homology CDS 8947 9552 . - 0 ID=cds-HIH2231816.1;Parent=gene-ACYKK2_001172;Dbxref=NCBI_GP:HIH2231816.1;Name=HIH2231816.1;Ontology_term=GO:0009691,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343518.1;locus_tag=ACYKK2_001172;product=TIGR00730 family Rossman fold protein;protein_id=HIH2231816.1;transl_table=11 DBLQKW010000023.1 tpg gene 9673 10461 . - . ID=gene-ACYKK2_001173;Name=ACYKK2_001173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001173 DBLQKW010000023.1 Protein Homology CDS 9673 10461 . - 0 ID=cds-HIH2231817.1;Parent=gene-ACYKK2_001173;Dbxref=NCBI_GP:HIH2231817.1;Name=HIH2231817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002864361.1;locus_tag=ACYKK2_001173;product=hypothetical protein;protein_id=HIH2231817.1;transl_table=11 DBLQKW010000023.1 tpg pseudogene 10475 11107 . - . ID=gene-ACYKK2_001174;Name=ACYKK2_001174;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001174;pseudo=true DBLQKW010000023.1 Protein Homology CDS 10475 11107 . - 0 ID=cds-ACYKK2_001174;Parent=gene-ACYKK2_001174;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002834137.1;locus_tag=ACYKK2_001174;product=hypothetical protein;pseudo=true;transl_table=11 DBLQKW010000023.1 tpg gene 11403 12257 . + . ID=gene-ACYKK2_001175;Name=ACYKK2_001175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001175 DBLQKW010000023.1 Protein Homology CDS 11403 12257 . + 0 ID=cds-HIH2231818.1;Parent=gene-ACYKK2_001175;Dbxref=NCBI_GP:HIH2231818.1;Name=HIH2231818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343521.1;locus_tag=ACYKK2_001175;product=hypothetical protein;protein_id=HIH2231818.1;transl_table=11 DBLQKW010000023.1 tpg gene 12242 12841 . + . ID=gene-ACYKK2_001176;Name=ACYKK2_001176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001176 DBLQKW010000023.1 Protein Homology CDS 12242 12841 . + 0 ID=cds-HIH2231819.1;Parent=gene-ACYKK2_001176;Dbxref=NCBI_GP:HIH2231819.1;Name=HIH2231819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343522.1;locus_tag=ACYKK2_001176;product=C39 family peptidase;protein_id=HIH2231819.1;transl_table=11 DBLQKW010000023.1 tpg gene 12890 13732 . - . ID=gene-ACYKK2_001177;Name=fliY;gbkey=Gene;gene=fliY;gene_biotype=protein_coding;locus_tag=ACYKK2_001177 DBLQKW010000023.1 Protein Homology CDS 12890 13732 . - 0 ID=cds-HIH2231820.1;Parent=gene-ACYKK2_001177;Dbxref=NCBI_GP:HIH2231820.1;Name=HIH2231820.1;Ontology_term=GO:0071973,GO:0003774,GO:0009425;gbkey=CDS;gene=fliY;go_component=bacterial-type flagellum basal body|0009425||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343523.1;locus_tag=ACYKK2_001177;product=flagellar motor switch protein FliY;protein_id=HIH2231820.1;transl_table=11 DBLQKW010000023.1 tpg gene 13729 14808 . - . ID=gene-ACYKK2_001178;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=ACYKK2_001178 DBLQKW010000023.1 Protein Homology CDS 13729 14808 . - 0 ID=cds-HIH2231821.1;Parent=gene-ACYKK2_001178;Dbxref=NCBI_GP:HIH2231821.1;Name=HIH2231821.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343524.1;locus_tag=ACYKK2_001178;product=flagellar motor switch protein FliM;protein_id=HIH2231821.1;transl_table=11 DBLQKW010000023.1 tpg gene 14808 15500 . - . ID=gene-ACYKK2_001179;Name=fliA;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;locus_tag=ACYKK2_001179 DBLQKW010000023.1 Protein Homology CDS 14808 15500 . - 0 ID=cds-HIH2231822.1;Parent=gene-ACYKK2_001179;Dbxref=NCBI_GP:HIH2231822.1;Name=HIH2231822.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;gene=fliA;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002851943.1;locus_tag=ACYKK2_001179;product=RNA polymerase sigma factor FliA;protein_id=HIH2231822.1;transl_table=11 DBLQKW010000023.1 tpg gene 15481 15837 . - . ID=gene-ACYKK2_001180;Name=ACYKK2_001180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001180 DBLQKW010000023.1 Protein Homology CDS 15481 15837 . - 0 ID=cds-HIH2231823.1;Parent=gene-ACYKK2_001180;Dbxref=NCBI_GP:HIH2231823.1;Name=HIH2231823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343526.1;locus_tag=ACYKK2_001180;product=hypothetical protein;protein_id=HIH2231823.1;transl_table=11 DBLQKW010000023.1 tpg gene 15856 16722 . - . ID=gene-ACYKK2_001181;Name=flhG;gbkey=Gene;gene=flhG;gene_biotype=protein_coding;locus_tag=ACYKK2_001181 DBLQKW010000023.1 Protein Homology CDS 15856 16722 . - 0 ID=cds-HIH2231824.1;Parent=gene-ACYKK2_001181;Dbxref=NCBI_GP:HIH2231824.1;Name=HIH2231824.1;gbkey=CDS;gene=flhG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343527.1;locus_tag=ACYKK2_001181;product=flagella biosynthesis ATPase FlhG;protein_id=HIH2231824.1;transl_table=11 DBLQKW010000023.1 tpg gene 16715 18169 . - . ID=gene-ACYKK2_001182;Name=flhF;gbkey=Gene;gene=flhF;gene_biotype=protein_coding;locus_tag=ACYKK2_001182 DBLQKW010000023.1 Protein Homology CDS 16715 18169 . - 0 ID=cds-HIH2231825.1;Parent=gene-ACYKK2_001182;Dbxref=NCBI_GP:HIH2231825.1;Name=HIH2231825.1;Ontology_term=GO:0044781,GO:0003924,GO:0005525;gbkey=CDS;gene=flhF;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343528.1;locus_tag=ACYKK2_001182;product=flagellar biosynthesis protein FlhF;protein_id=HIH2231825.1;transl_table=11 DBLQKW010000023.1 tpg gene 18179 18652 . - . ID=gene-ACYKK2_001183;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=ACYKK2_001183 DBLQKW010000023.1 Protein Homology CDS 18179 18652 . - 0 ID=cds-HIH2231826.1;Parent=gene-ACYKK2_001183;Dbxref=NCBI_GP:HIH2231826.1;Name=HIH2231826.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343529.1;locus_tag=ACYKK2_001183;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=HIH2231826.1;transl_table=11 DBLQKW010000023.1 tpg gene 18655 19134 . - . ID=gene-ACYKK2_001184;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=ACYKK2_001184 DBLQKW010000023.1 Protein Homology CDS 18655 19134 . - 0 ID=cds-HIH2231827.1;Parent=gene-ACYKK2_001184;Dbxref=NCBI_GP:HIH2231827.1;Name=HIH2231827.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343530.1;locus_tag=ACYKK2_001184;product=type II 3-dehydroquinate dehydratase;protein_id=HIH2231827.1;transl_table=11 DBLQKW010000023.1 tpg gene 19225 20454 . + . ID=gene-ACYKK2_001185;Name=mqnF;gbkey=Gene;gene=mqnF;gene_biotype=protein_coding;locus_tag=ACYKK2_001185 DBLQKW010000023.1 Protein Homology CDS 19225 20454 . + 0 ID=cds-HIH2231828.1;Parent=gene-ACYKK2_001185;Dbxref=NCBI_GP:HIH2231828.1;Name=HIH2231828.1;gbkey=CDS;gene=mqnF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343531.1;locus_tag=ACYKK2_001185;product=aminofutalosine deaminase family hydrolase;protein_id=HIH2231828.1;transl_table=11 DBLQKW010000023.1 tpg gene 20442 21338 . + . ID=gene-ACYKK2_001186;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=ACYKK2_001186 DBLQKW010000023.1 Protein Homology CDS 20442 21338 . + 0 ID=cds-HIH2231829.1;Parent=gene-ACYKK2_001186;Dbxref=NCBI_GP:HIH2231829.1;Name=HIH2231829.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=sppA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343532.1;locus_tag=ACYKK2_001186;product=signal peptide peptidase SppA;protein_id=HIH2231829.1;transl_table=11 DBLQKW010000023.1 tpg gene 21417 22448 . + . ID=gene-ACYKK2_001187;Name=ACYKK2_001187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001187 DBLQKW010000023.1 Protein Homology CDS 21417 22448 . + 0 ID=cds-HIH2231830.1;Parent=gene-ACYKK2_001187;Dbxref=NCBI_GP:HIH2231830.1;Name=HIH2231830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343533.1;locus_tag=ACYKK2_001187;product=Cj0069 family protein;protein_id=HIH2231830.1;transl_table=11 DBLQKW010000023.1 tpg pseudogene 22690 23255 . - . ID=gene-ACYKK2_001188;Name=ACYKK2_001188;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001188;pseudo=true DBLQKW010000023.1 Protein Homology CDS 22690 23255 . - 0 ID=cds-ACYKK2_001188;Parent=gene-ACYKK2_001188;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002778768.1;locus_tag=ACYKK2_001188;product=hemerythrin family protein;pseudo=true;transl_table=11 ##sequence-region DBLQKW010000024.1 1 23248 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000024.1 tpg region 1 23248 . + . ID=DBLQKW010000024.1:1..23248;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000024.1 tpg gene 1 449 . - . ID=gene-ACYKK2_001189;Name=ACYKK2_001189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001189;partial=true;start_range=.,1 DBLQKW010000024.1 Protein Homology CDS 1 449 . - 0 ID=cds-HIH2231831.1;Parent=gene-ACYKK2_001189;Dbxref=NCBI_GP:HIH2231831.1;Name=HIH2231831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344669.1;locus_tag=ACYKK2_001189;partial=true;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=HIH2231831.1;start_range=.,1;transl_table=11 DBLQKW010000024.1 tpg gene 449 1684 . - . ID=gene-ACYKK2_001190;Name=ACYKK2_001190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001190 DBLQKW010000024.1 Protein Homology CDS 449 1684 . - 0 ID=cds-HIH2231832.1;Parent=gene-ACYKK2_001190;Dbxref=NCBI_GP:HIH2231832.1;Name=HIH2231832.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344670.1;locus_tag=ACYKK2_001190;product=fibronectin type III domain-containing protein;protein_id=HIH2231832.1;transl_table=11 DBLQKW010000024.1 tpg gene 1629 2597 . - . ID=gene-ACYKK2_001191;Name=ACYKK2_001191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001191 DBLQKW010000024.1 Protein Homology CDS 1629 2597 . - 0 ID=cds-HIH2231833.1;Parent=gene-ACYKK2_001191;Dbxref=NCBI_GP:HIH2231833.1;Name=HIH2231833.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344671.1;locus_tag=ACYKK2_001191;product=RluA family pseudouridine synthase;protein_id=HIH2231833.1;transl_table=11 DBLQKW010000024.1 tpg gene 2675 3775 . + . ID=gene-ACYKK2_001192;Name=ACYKK2_001192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001192 DBLQKW010000024.1 Protein Homology CDS 2675 3775 . + 0 ID=cds-HIH2231834.1;Parent=gene-ACYKK2_001192;Dbxref=NCBI_GP:HIH2231834.1;Name=HIH2231834.1;Ontology_term=GO:0008360,GO:0008955;gbkey=CDS;go_function=peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344672.1;locus_tag=ACYKK2_001192;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=HIH2231834.1;transl_table=11 DBLQKW010000024.1 tpg gene 3829 3905 . + . ID=gene-ACYKK2_001193;Name=ACYKK2_001193;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_001193 DBLQKW010000024.1 tRNAscan-SE tRNA 3829 3905 . + . ID=rna-ACYKK2_001193;Parent=gene-ACYKK2_001193;anticodon=(pos:3863..3865);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001193;product=tRNA-Ile DBLQKW010000024.1 tRNAscan-SE exon 3829 3905 . + . ID=exon-ACYKK2_001193-1;Parent=rna-ACYKK2_001193;anticodon=(pos:3863..3865);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001193;product=tRNA-Ile DBLQKW010000024.1 tpg gene 4013 4088 . - . ID=gene-ACYKK2_001194;Name=ACYKK2_001194;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_001194 DBLQKW010000024.1 tRNAscan-SE tRNA 4013 4088 . - . ID=rna-ACYKK2_001194;Parent=gene-ACYKK2_001194;anticodon=(pos:complement(4053..4055));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001194;product=tRNA-Phe DBLQKW010000024.1 tRNAscan-SE exon 4013 4088 . - . ID=exon-ACYKK2_001194-1;Parent=rna-ACYKK2_001194;anticodon=(pos:complement(4053..4055));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001194;product=tRNA-Phe DBLQKW010000024.1 tpg gene 4228 5571 . + . ID=gene-ACYKK2_001195;Name=ACYKK2_001195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001195 DBLQKW010000024.1 Protein Homology CDS 4228 5571 . + 0 ID=cds-HIH2231835.1;Parent=gene-ACYKK2_001195;Dbxref=NCBI_GP:HIH2231835.1;Name=HIH2231835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344673.1;locus_tag=ACYKK2_001195;product=TrkH family potassium uptake protein;protein_id=HIH2231835.1;transl_table=11 DBLQKW010000024.1 tpg gene 5582 6232 . + . ID=gene-ACYKK2_001196;Name=ACYKK2_001196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001196 DBLQKW010000024.1 Protein Homology CDS 5582 6232 . + 0 ID=cds-HIH2231836.1;Parent=gene-ACYKK2_001196;Dbxref=NCBI_GP:HIH2231836.1;Name=HIH2231836.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344674.1;locus_tag=ACYKK2_001196;product=potassium channel family protein;protein_id=HIH2231836.1;transl_table=11 DBLQKW010000024.1 tpg gene 6229 6900 . - . ID=gene-ACYKK2_001197;Name=ACYKK2_001197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001197 DBLQKW010000024.1 Protein Homology CDS 6229 6900 . - 0 ID=cds-HIH2231837.1;Parent=gene-ACYKK2_001197;Dbxref=NCBI_GP:HIH2231837.1;Name=HIH2231837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344675.1;locus_tag=ACYKK2_001197;product=MqnA/MqnD/SBP family protein;protein_id=HIH2231837.1;transl_table=11 DBLQKW010000024.1 tpg gene 6906 7532 . - . ID=gene-ACYKK2_001198;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=ACYKK2_001198 DBLQKW010000024.1 Protein Homology CDS 6906 7532 . - 0 ID=cds-HIH2231838.1;Parent=gene-ACYKK2_001198;Dbxref=NCBI_GP:HIH2231838.1;Name=HIH2231838.1;Ontology_term=GO:0006223,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=uracil salvage|0006223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344676.1;locus_tag=ACYKK2_001198;product=uracil phosphoribosyltransferase;protein_id=HIH2231838.1;transl_table=11 DBLQKW010000024.1 tpg gene 7529 8764 . - . ID=gene-ACYKK2_001199;Name=ACYKK2_001199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001199 DBLQKW010000024.1 Protein Homology CDS 7529 8764 . - 0 ID=cds-HIH2231839.1;Parent=gene-ACYKK2_001199;Dbxref=NCBI_GP:HIH2231839.1;Name=HIH2231839.1;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344677.1;locus_tag=ACYKK2_001199;product=malic enzyme-like NAD(P)-binding protein;protein_id=HIH2231839.1;transl_table=11 DBLQKW010000024.1 tpg gene 8766 10157 . - . ID=gene-ACYKK2_001200;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=ACYKK2_001200 DBLQKW010000024.1 Protein Homology CDS 8766 10157 . - 0 ID=cds-HIH2231840.1;Parent=gene-ACYKK2_001200;Dbxref=NCBI_GP:HIH2231840.1;Name=HIH2231840.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344678.1;locus_tag=ACYKK2_001200;product=glutamate--tRNA ligase;protein_id=HIH2231840.1;transl_table=11 DBLQKW010000024.1 tpg gene 10222 11037 . + . ID=gene-ACYKK2_001201;Name=salC;gbkey=Gene;gene=salC;gene_biotype=protein_coding;locus_tag=ACYKK2_001201 DBLQKW010000024.1 Protein Homology CDS 10222 11037 . + 0 ID=cds-HIH2231841.1;Parent=gene-ACYKK2_001201;Dbxref=NCBI_GP:HIH2231841.1;Name=HIH2231841.1;gbkey=CDS;gene=salC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344679.1;locus_tag=ACYKK2_001201;product=peptidylprolyl isomerase SalC;protein_id=HIH2231841.1;transl_table=11 DBLQKW010000024.1 tpg gene 11074 12405 . - . ID=gene-ACYKK2_001202;Name=ACYKK2_001202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001202 DBLQKW010000024.1 Protein Homology CDS 11074 12405 . - 0 ID=cds-HIH2231842.1;Parent=gene-ACYKK2_001202;Dbxref=NCBI_GP:HIH2231842.1;Name=HIH2231842.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344680.1;locus_tag=ACYKK2_001202;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=HIH2231842.1;transl_table=11 DBLQKW010000024.1 tpg gene 12407 12862 . - . ID=gene-ACYKK2_001203;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=ACYKK2_001203 DBLQKW010000024.1 Protein Homology CDS 12407 12862 . - 0 ID=cds-HIH2231843.1;Parent=gene-ACYKK2_001203;Dbxref=NCBI_GP:HIH2231843.1;Name=HIH2231843.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344681.1;locus_tag=ACYKK2_001203;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=HIH2231843.1;transl_table=11 DBLQKW010000024.1 tpg gene 13008 13568 . + . ID=gene-ACYKK2_001204;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=ACYKK2_001204 DBLQKW010000024.1 Protein Homology CDS 13008 13568 . + 0 ID=cds-HIH2231844.1;Parent=gene-ACYKK2_001204;Dbxref=NCBI_GP:HIH2231844.1;Name=HIH2231844.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344682.1;locus_tag=ACYKK2_001204;product=dCTP deaminase;protein_id=HIH2231844.1;transl_table=11 DBLQKW010000024.1 tpg gene 13618 14622 . + . ID=gene-ACYKK2_001205;Name=pseB;gbkey=Gene;gene=pseB;gene_biotype=protein_coding;locus_tag=ACYKK2_001205 DBLQKW010000024.1 Protein Homology CDS 13618 14622 . + 0 ID=cds-HIH2231845.1;Parent=gene-ACYKK2_001205;Dbxref=NCBI_GP:HIH2231845.1;Name=HIH2231845.1;gbkey=CDS;gene=pseB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344683.1;locus_tag=ACYKK2_001205;product=UDP-N-acetylglucosamine 4%2C6-dehydratase (inverting);protein_id=HIH2231845.1;transl_table=11 DBLQKW010000024.1 tpg gene 14624 15754 . + . ID=gene-ACYKK2_001206;Name=pseC;gbkey=Gene;gene=pseC;gene_biotype=protein_coding;locus_tag=ACYKK2_001206 DBLQKW010000024.1 Protein Homology CDS 14624 15754 . + 0 ID=cds-HIH2231846.1;Parent=gene-ACYKK2_001206;Dbxref=NCBI_GP:HIH2231846.1;Name=HIH2231846.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pseC;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002777631.1;locus_tag=ACYKK2_001206;product=UDP-4-amino-4%2C6-dideoxy-N-acetyl-beta-L-altrosamine transaminase;protein_id=HIH2231846.1;transl_table=11 DBLQKW010000024.1 tpg pseudogene 15747 17058 . + . ID=gene-ACYKK2_001207;Name=ACYKK2_001207;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001207;pseudo=true DBLQKW010000024.1 Protein Homology CDS 15747 17058 . + 0 ID=cds-ACYKK2_001207;Parent=gene-ACYKK2_001207;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344685.1;locus_tag=ACYKK2_001207;product=DUF4910 domain-containing protein;pseudo=true;transl_table=11 DBLQKW010000024.1 tpg pseudogene 17055 17845 . + . ID=gene-ACYKK2_001208;Name=ACYKK2_001208;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001208;pseudo=true DBLQKW010000024.1 Protein Homology CDS 17055 17845 . + 0 ID=cds-ACYKK2_001208;Parent=gene-ACYKK2_001208;Note=frameshifted;Ontology_term=GO:0046677,GO:0046353;gbkey=CDS;go_function=aminoglycoside 3-N-acetyltransferase activity|0046353||IEA;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011989744.1;locus_tag=ACYKK2_001208;product=AAC(3) family N-acetyltransferase;pseudo=true;transl_table=11 DBLQKW010000024.1 tpg gene 17866 18657 . + . ID=gene-ACYKK2_001209;Name=legH;gbkey=Gene;gene=legH;gene_biotype=protein_coding;locus_tag=ACYKK2_001209 DBLQKW010000024.1 Protein Homology CDS 17866 18657 . + 0 ID=cds-HIH2231847.1;Parent=gene-ACYKK2_001209;Dbxref=NCBI_GP:HIH2231847.1;Name=HIH2231847.1;gbkey=CDS;gene=legH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344688.1;locus_tag=ACYKK2_001209;product=N-acetyltransferase LegH;protein_id=HIH2231847.1;transl_table=11 DBLQKW010000024.1 tpg gene 18688 18918 . + . ID=gene-ACYKK2_001210;Name=ACYKK2_001210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001210 DBLQKW010000024.1 Protein Homology CDS 18688 18918 . + 0 ID=cds-HIH2231848.1;Parent=gene-ACYKK2_001210;Dbxref=NCBI_GP:HIH2231848.1;Name=HIH2231848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344689.1;locus_tag=ACYKK2_001210;product=acyl carrier protein;protein_id=HIH2231848.1;transl_table=11 DBLQKW010000024.1 tpg gene 18915 19808 . + . ID=gene-ACYKK2_001211;Name=ACYKK2_001211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001211 DBLQKW010000024.1 Protein Homology CDS 18915 19808 . + 0 ID=cds-HIH2231849.1;Parent=gene-ACYKK2_001211;Dbxref=NCBI_GP:HIH2231849.1;Name=HIH2231849.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344690.1;locus_tag=ACYKK2_001211;product=class I SAM-dependent methyltransferase;protein_id=HIH2231849.1;transl_table=11 DBLQKW010000024.1 tpg gene 19801 20217 . + . ID=gene-ACYKK2_001212;Name=ACYKK2_001212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001212 DBLQKW010000024.1 Protein Homology CDS 19801 20217 . + 0 ID=cds-HIH2231850.1;Parent=gene-ACYKK2_001212;Dbxref=NCBI_GP:HIH2231850.1;Name=HIH2231850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344691.1;locus_tag=ACYKK2_001212;product=VOC family protein;protein_id=HIH2231850.1;transl_table=11 DBLQKW010000024.1 tpg gene 20214 21776 . + . ID=gene-ACYKK2_001213;Name=ACYKK2_001213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001213 DBLQKW010000024.1 Protein Homology CDS 20214 21776 . + 0 ID=cds-HIH2231851.1;Parent=gene-ACYKK2_001213;Dbxref=NCBI_GP:HIH2231851.1;Name=HIH2231851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344692.1;locus_tag=ACYKK2_001213;product=HAD family hydrolase;protein_id=HIH2231851.1;transl_table=11 DBLQKW010000024.1 tpg gene 21766 22827 . + . ID=gene-ACYKK2_001214;Name=ACYKK2_001214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001214 DBLQKW010000024.1 Protein Homology CDS 21766 22827 . + 0 ID=cds-HIH2231852.1;Parent=gene-ACYKK2_001214;Dbxref=NCBI_GP:HIH2231852.1;Name=HIH2231852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344693.1;locus_tag=ACYKK2_001214;product=beta-ketoacyl-ACP synthase III;protein_id=HIH2231852.1;transl_table=11 DBLQKW010000024.1 tpg gene 22827 23048 . + . ID=gene-ACYKK2_001215;Name=ACYKK2_001215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001215 DBLQKW010000024.1 Protein Homology CDS 22827 23048 . + 0 ID=cds-HIH2231853.1;Parent=gene-ACYKK2_001215;Dbxref=NCBI_GP:HIH2231853.1;Name=HIH2231853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344694.1;locus_tag=ACYKK2_001215;product=acyl carrier protein;protein_id=HIH2231853.1;transl_table=11 DBLQKW010000024.1 tpg gene 23062 23248 . - . ID=gene-ACYKK2_001216;Name=ACYKK2_001216;end_range=23248,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001216;partial=true DBLQKW010000024.1 Protein Homology CDS 23062 23248 . - 1 ID=cds-HIH2231854.1;Parent=gene-ACYKK2_001216;Dbxref=NCBI_GP:HIH2231854.1;Name=HIH2231854.1;end_range=23248,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344695.1;locus_tag=ACYKK2_001216;partial=true;product=DUF2920 family protein;protein_id=HIH2231854.1;transl_table=11 ##sequence-region DBLQKW010000025.1 1 20444 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000025.1 tpg region 1 20444 . + . ID=DBLQKW010000025.1:1..20444;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000025.1 tpg gene 70 348 . + . ID=gene-ACYKK2_001217;Name=ACYKK2_001217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001217 DBLQKW010000025.1 Protein Homology CDS 70 348 . + 0 ID=cds-HIH2231855.1;Parent=gene-ACYKK2_001217;Dbxref=NCBI_GP:HIH2231855.1;Name=HIH2231855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002864990.1;locus_tag=ACYKK2_001217;product=EexN family lipoprotein;protein_id=HIH2231855.1;transl_table=11 DBLQKW010000025.1 tpg gene 464 739 . - . ID=gene-ACYKK2_001218;Name=ACYKK2_001218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001218 DBLQKW010000025.1 Protein Homology CDS 464 739 . - 0 ID=cds-HIH2231856.1;Parent=gene-ACYKK2_001218;Dbxref=NCBI_GP:HIH2231856.1;Name=HIH2231856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014517324.1;locus_tag=ACYKK2_001218;product=hypothetical protein;protein_id=HIH2231856.1;transl_table=11 DBLQKW010000025.1 tpg gene 1231 1449 . + . ID=gene-ACYKK2_001219;Name=ACYKK2_001219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001219 DBLQKW010000025.1 Protein Homology CDS 1231 1449 . + 0 ID=cds-HIH2231857.1;Parent=gene-ACYKK2_001219;Dbxref=NCBI_GP:HIH2231857.1;Name=HIH2231857.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002818418.1;locus_tag=ACYKK2_001219;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=HIH2231857.1;transl_table=11 DBLQKW010000025.1 tpg gene 1442 1645 . + . ID=gene-ACYKK2_001220;Name=ACYKK2_001220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001220 DBLQKW010000025.1 Protein Homology CDS 1442 1645 . + 0 ID=cds-HIH2231858.1;Parent=gene-ACYKK2_001220;Dbxref=NCBI_GP:HIH2231858.1;Name=HIH2231858.1;Ontology_term=GO:0003729;gbkey=CDS;go_function=mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002779783.1;locus_tag=ACYKK2_001220;product=type II toxin-antitoxin system HicA family toxin;protein_id=HIH2231858.1;transl_table=11 DBLQKW010000025.1 tpg gene 1649 3442 . + . ID=gene-ACYKK2_001221;Name=ACYKK2_001221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001221 DBLQKW010000025.1 Protein Homology CDS 1649 3442 . + 0 ID=cds-HIH2231859.1;Parent=gene-ACYKK2_001221;Dbxref=NCBI_GP:HIH2231859.1;Name=HIH2231859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002835057.1;locus_tag=ACYKK2_001221;product=AAA family ATPase;protein_id=HIH2231859.1;transl_table=11 DBLQKW010000025.1 tpg gene 3565 4179 . - . ID=gene-ACYKK2_001222;Name=ACYKK2_001222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001222 DBLQKW010000025.1 Protein Homology CDS 3565 4179 . - 0 ID=cds-HIH2231860.1;Parent=gene-ACYKK2_001222;Dbxref=NCBI_GP:HIH2231860.1;Name=HIH2231860.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809050.1;locus_tag=ACYKK2_001222;product=recombinase family protein;protein_id=HIH2231860.1;transl_table=11 DBLQKW010000025.1 tpg gene 4176 4553 . - . ID=gene-ACYKK2_001223;Name=vapD;gbkey=Gene;gene=vapD;gene_biotype=protein_coding;locus_tag=ACYKK2_001223 DBLQKW010000025.1 Protein Homology CDS 4176 4553 . - 0 ID=cds-HIH2231861.1;Parent=gene-ACYKK2_001223;Dbxref=NCBI_GP:HIH2231861.1;Name=HIH2231861.1;gbkey=CDS;gene=vapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809051.1;locus_tag=ACYKK2_001223;product=virulence-associated protein VapD;protein_id=HIH2231861.1;transl_table=11 DBLQKW010000025.1 tpg gene 4544 4867 . - . ID=gene-ACYKK2_001224;Name=ACYKK2_001224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001224 DBLQKW010000025.1 Protein Homology CDS 4544 4867 . - 0 ID=cds-HIH2231862.1;Parent=gene-ACYKK2_001224;Dbxref=NCBI_GP:HIH2231862.1;Name=HIH2231862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002779624.1;locus_tag=ACYKK2_001224;product=hypothetical protein;protein_id=HIH2231862.1;transl_table=11 DBLQKW010000025.1 tpg gene 5038 5301 . + . ID=gene-ACYKK2_001225;Name=ACYKK2_001225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001225 DBLQKW010000025.1 Protein Homology CDS 5038 5301 . + 0 ID=cds-HIH2231863.1;Parent=gene-ACYKK2_001225;Dbxref=NCBI_GP:HIH2231863.1;Name=HIH2231863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002828964.1;locus_tag=ACYKK2_001225;product=TrbC/VirB2 family protein;protein_id=HIH2231863.1;transl_table=11 DBLQKW010000025.1 tpg gene 5314 8082 . + . ID=gene-ACYKK2_001226;Name=ACYKK2_001226;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001226 DBLQKW010000025.1 Protein Homology CDS 5314 8082 . + 0 ID=cds-HIH2231864.1;Parent=gene-ACYKK2_001226;Dbxref=NCBI_GP:HIH2231864.1;Name=HIH2231864.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002788503.1;locus_tag=ACYKK2_001226;product=VirB4 family type IV secretion/conjugal transfer ATPase;protein_id=HIH2231864.1;transl_table=11 DBLQKW010000025.1 tpg gene 8093 8659 . + . ID=gene-ACYKK2_001227;Name=ACYKK2_001227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001227 DBLQKW010000025.1 Protein Homology CDS 8093 8659 . + 0 ID=cds-HIH2231865.1;Parent=gene-ACYKK2_001227;Dbxref=NCBI_GP:HIH2231865.1;Name=HIH2231865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002869250.1;locus_tag=ACYKK2_001227;product=Rha family transcriptional regulator;protein_id=HIH2231865.1;transl_table=11 DBLQKW010000025.1 tpg gene 8656 9207 . + . ID=gene-ACYKK2_001228;Name=ACYKK2_001228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001228 DBLQKW010000025.1 Protein Homology CDS 8656 9207 . + 0 ID=cds-HIH2231866.1;Parent=gene-ACYKK2_001228;Dbxref=NCBI_GP:HIH2231866.1;Name=HIH2231866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002779628.1;locus_tag=ACYKK2_001228;product=hypothetical protein;protein_id=HIH2231866.1;transl_table=11 DBLQKW010000025.1 tpg gene 9241 9663 . + . ID=gene-ACYKK2_001229;Name=ACYKK2_001229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001229 DBLQKW010000025.1 Protein Homology CDS 9241 9663 . + 0 ID=cds-HIH2231867.1;Parent=gene-ACYKK2_001229;Dbxref=NCBI_GP:HIH2231867.1;Name=HIH2231867.1;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002779629.1;locus_tag=ACYKK2_001229;product=single-stranded DNA-binding protein;protein_id=HIH2231867.1;transl_table=11 DBLQKW010000025.1 tpg gene 9679 9954 . + . ID=gene-ACYKK2_001230;Name=ACYKK2_001230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001230 DBLQKW010000025.1 Protein Homology CDS 9679 9954 . + 0 ID=cds-HIH2231868.1;Parent=gene-ACYKK2_001230;Dbxref=NCBI_GP:HIH2231868.1;Name=HIH2231868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803305.1;locus_tag=ACYKK2_001230;product=hypothetical protein;protein_id=HIH2231868.1;transl_table=11 DBLQKW010000025.1 tpg gene 9958 10944 . + . ID=gene-ACYKK2_001231;Name=ACYKK2_001231;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001231 DBLQKW010000025.1 Protein Homology CDS 9958 10944 . + 0 ID=cds-HIH2231869.1;Parent=gene-ACYKK2_001231;Dbxref=NCBI_GP:HIH2231869.1;Name=HIH2231869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002788510.1;locus_tag=ACYKK2_001231;product=type IV secretion system protein;protein_id=HIH2231869.1;transl_table=11 DBLQKW010000025.1 tpg gene 10948 11940 . + . ID=gene-ACYKK2_001232;Name=ACYKK2_001232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001232 DBLQKW010000025.1 Protein Homology CDS 10948 11940 . + 0 ID=cds-HIH2231870.1;Parent=gene-ACYKK2_001232;Dbxref=NCBI_GP:HIH2231870.1;Name=HIH2231870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002822835.1;locus_tag=ACYKK2_001232;product=type IV secretion system protein;protein_id=HIH2231870.1;transl_table=11 DBLQKW010000025.1 tpg gene 11930 12094 . + . ID=gene-ACYKK2_001233;Name=ACYKK2_001233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001233 DBLQKW010000025.1 Protein Homology CDS 11930 12094 . + 0 ID=cds-HIH2231871.1;Parent=gene-ACYKK2_001233;Dbxref=NCBI_GP:HIH2231871.1;Name=HIH2231871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002807851.1;locus_tag=ACYKK2_001233;product=hypothetical protein;protein_id=HIH2231871.1;transl_table=11 DBLQKW010000025.1 tpg gene 12084 12746 . + . ID=gene-ACYKK2_001234;Name=ACYKK2_001234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001234 DBLQKW010000025.1 Protein Homology CDS 12084 12746 . + 0 ID=cds-HIH2231872.1;Parent=gene-ACYKK2_001234;Dbxref=NCBI_GP:HIH2231872.1;Name=HIH2231872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809287.1;locus_tag=ACYKK2_001234;product=virB8 family protein;protein_id=HIH2231872.1;transl_table=11 DBLQKW010000025.1 tpg gene 12743 13630 . + . ID=gene-ACYKK2_001235;Name=virB9;gbkey=Gene;gene=virB9;gene_biotype=protein_coding;locus_tag=ACYKK2_001235 DBLQKW010000025.1 Protein Homology CDS 12743 13630 . + 0 ID=cds-HIH2231873.1;Parent=gene-ACYKK2_001235;Dbxref=NCBI_GP:HIH2231873.1;Name=HIH2231873.1;gbkey=CDS;gene=virB9;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002834097.1;locus_tag=ACYKK2_001235;product=P-type conjugative transfer protein VirB9;protein_id=HIH2231873.1;transl_table=11 DBLQKW010000025.1 tpg gene 13657 14832 . + . ID=gene-ACYKK2_001236;Name=virB10;gbkey=Gene;gene=virB10;gene_biotype=protein_coding;locus_tag=ACYKK2_001236 DBLQKW010000025.1 Protein Homology CDS 13657 14832 . + 0 ID=cds-HIH2231874.1;Parent=gene-ACYKK2_001236;Dbxref=NCBI_GP:HIH2231874.1;Name=HIH2231874.1;gbkey=CDS;gene=virB10;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002826433.1;locus_tag=ACYKK2_001236;product=type IV secretion system protein VirB10;protein_id=HIH2231874.1;transl_table=11 DBLQKW010000025.1 tpg gene 14813 15805 . + . ID=gene-ACYKK2_001237;Name=virB11;gbkey=Gene;gene=virB11;gene_biotype=protein_coding;locus_tag=ACYKK2_001237 DBLQKW010000025.1 Protein Homology CDS 14813 15805 . + 0 ID=cds-HIH2231875.1;Parent=gene-ACYKK2_001237;Dbxref=NCBI_GP:HIH2231875.1;Name=HIH2231875.1;Ontology_term=GO:0044097,GO:0043684;gbkey=CDS;gene=virB11;go_component=type IV secretion system complex|0043684||IEA;go_process=secretion by the type IV secretion system|0044097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935698.1;locus_tag=ACYKK2_001237;product=P-type DNA transfer ATPase VirB11;protein_id=HIH2231875.1;transl_table=11 DBLQKW010000025.1 tpg gene 15806 17617 . + . ID=gene-ACYKK2_001238;Name=ACYKK2_001238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001238 DBLQKW010000025.1 Protein Homology CDS 15806 17617 . + 0 ID=cds-HIH2231876.1;Parent=gene-ACYKK2_001238;Dbxref=NCBI_GP:HIH2231876.1;Name=HIH2231876.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002822838.1;locus_tag=ACYKK2_001238;product=type IV secretory system conjugative DNA transfer family protein;protein_id=HIH2231876.1;transl_table=11 DBLQKW010000025.1 tpg gene 17598 18023 . + . ID=gene-ACYKK2_001239;Name=ACYKK2_001239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001239 DBLQKW010000025.1 Protein Homology CDS 17598 18023 . + 0 ID=cds-HIH2231877.1;Parent=gene-ACYKK2_001239;Dbxref=NCBI_GP:HIH2231877.1;Name=HIH2231877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002822840.1;locus_tag=ACYKK2_001239;product=cag pathogenicity island Cag12 family protein;protein_id=HIH2231877.1;transl_table=11 DBLQKW010000025.1 tpg gene 18035 18799 . + . ID=gene-ACYKK2_001240;Name=ACYKK2_001240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001240 DBLQKW010000025.1 Protein Homology CDS 18035 18799 . + 0 ID=cds-HIH2231878.1;Parent=gene-ACYKK2_001240;Dbxref=NCBI_GP:HIH2231878.1;Name=HIH2231878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809111.1;locus_tag=ACYKK2_001240;product=TrbM/KikA/MpfK family conjugal transfer protein;protein_id=HIH2231878.1;transl_table=11 DBLQKW010000025.1 tpg gene 18802 19599 . + . ID=gene-ACYKK2_001241;Name=ACYKK2_001241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001241 DBLQKW010000025.1 Protein Homology CDS 18802 19599 . + 0 ID=cds-HIH2231879.1;Parent=gene-ACYKK2_001241;Dbxref=NCBI_GP:HIH2231879.1;Name=HIH2231879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002779641.1;locus_tag=ACYKK2_001241;product=hypothetical protein;protein_id=HIH2231879.1;transl_table=11 DBLQKW010000025.1 tpg gene 19674 20294 . + . ID=gene-ACYKK2_001242;Name=ACYKK2_001242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001242 DBLQKW010000025.1 Protein Homology CDS 19674 20294 . + 0 ID=cds-HIH2231880.1;Parent=gene-ACYKK2_001242;Dbxref=NCBI_GP:HIH2231880.1;Name=HIH2231880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002801287.1;locus_tag=ACYKK2_001242;product=hypothetical protein;protein_id=HIH2231880.1;transl_table=11 ##sequence-region DBLQKW010000026.1 1 19384 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000026.1 tpg region 1 19384 . + . ID=DBLQKW010000026.1:1..19384;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000026.1 tpg gene 67 822 . + . ID=gene-ACYKK2_001243;Name=ACYKK2_001243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001243 DBLQKW010000026.1 Protein Homology CDS 67 822 . + 0 ID=cds-HIH2231881.1;Parent=gene-ACYKK2_001243;Dbxref=NCBI_GP:HIH2231881.1;Name=HIH2231881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344152.1;locus_tag=ACYKK2_001243;product=basic amino acid ABC transporter substrate-binding protein;protein_id=HIH2231881.1;transl_table=11 DBLQKW010000026.1 tpg gene 846 1484 . - . ID=gene-ACYKK2_001244;Name=ACYKK2_001244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001244 DBLQKW010000026.1 Protein Homology CDS 846 1484 . - 0 ID=cds-HIH2231882.1;Parent=gene-ACYKK2_001244;Dbxref=NCBI_GP:HIH2231882.1;Name=HIH2231882.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344151.1;locus_tag=ACYKK2_001244;product=HAD family hydrolase;protein_id=HIH2231882.1;transl_table=11 DBLQKW010000026.1 tpg gene 1481 2470 . - . ID=gene-ACYKK2_001245;Name=ACYKK2_001245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001245 DBLQKW010000026.1 Protein Homology CDS 1481 2470 . - 0 ID=cds-HIH2231883.1;Parent=gene-ACYKK2_001245;Dbxref=NCBI_GP:HIH2231883.1;Name=HIH2231883.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344150.1;locus_tag=ACYKK2_001245;product=ABC transporter ATP-binding protein;protein_id=HIH2231883.1;transl_table=11 DBLQKW010000026.1 tpg pseudogene 2474 3252 . - . ID=gene-ACYKK2_001246;Name=ACYKK2_001246;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001246;pseudo=true DBLQKW010000026.1 Protein Homology CDS 2474 3252 . - 0 ID=cds-ACYKK2_001246;Parent=gene-ACYKK2_001246;Note=frameshifted;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344149.1;locus_tag=ACYKK2_001246;product=ABC transporter permease;pseudo=true;transl_table=11 DBLQKW010000026.1 tpg gene 3253 4092 . - . ID=gene-ACYKK2_001247;Name=ACYKK2_001247;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001247 DBLQKW010000026.1 Protein Homology CDS 3253 4092 . - 0 ID=cds-HIH2231884.1;Parent=gene-ACYKK2_001247;Dbxref=NCBI_GP:HIH2231884.1;Name=HIH2231884.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344148.1;locus_tag=ACYKK2_001247;product=ABC transporter permease;protein_id=HIH2231884.1;transl_table=11 DBLQKW010000026.1 tpg gene 4089 4898 . - . ID=gene-ACYKK2_001248;Name=ACYKK2_001248;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001248 DBLQKW010000026.1 Protein Homology CDS 4089 4898 . - 0 ID=cds-HIH2231885.1;Parent=gene-ACYKK2_001248;Dbxref=NCBI_GP:HIH2231885.1;Name=HIH2231885.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344147.1;locus_tag=ACYKK2_001248;product=alkaline phosphatase family protein;protein_id=HIH2231885.1;transl_table=11 DBLQKW010000026.1 tpg gene 4895 6220 . - . ID=gene-ACYKK2_001249;Name=ACYKK2_001249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001249 DBLQKW010000026.1 Protein Homology CDS 4895 6220 . - 0 ID=cds-HIH2231886.1;Parent=gene-ACYKK2_001249;Dbxref=NCBI_GP:HIH2231886.1;Name=HIH2231886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344146.1;locus_tag=ACYKK2_001249;product=esterase-like activity of phytase family protein;protein_id=HIH2231886.1;transl_table=11 DBLQKW010000026.1 tpg gene 6231 7277 . - . ID=gene-ACYKK2_001250;Name=ACYKK2_001250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001250 DBLQKW010000026.1 Protein Homology CDS 6231 7277 . - 0 ID=cds-HIH2231887.1;Parent=gene-ACYKK2_001250;Dbxref=NCBI_GP:HIH2231887.1;Name=HIH2231887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344145.1;locus_tag=ACYKK2_001250;product=ABC transporter substrate-binding protein;protein_id=HIH2231887.1;transl_table=11 DBLQKW010000026.1 tpg gene 7394 8377 . + . ID=gene-ACYKK2_001251;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=ACYKK2_001251 DBLQKW010000026.1 Protein Homology CDS 7394 8377 . + 0 ID=cds-HIH2231888.1;Parent=gene-ACYKK2_001251;Dbxref=NCBI_GP:HIH2231888.1;Name=HIH2231888.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344144.1;locus_tag=ACYKK2_001251;product=magnesium/cobalt transporter CorA;protein_id=HIH2231888.1;transl_table=11 DBLQKW010000026.1 tpg gene 8398 8940 . + . ID=gene-ACYKK2_001252;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=ACYKK2_001252 DBLQKW010000026.1 Protein Homology CDS 8398 8940 . + 0 ID=cds-HIH2231889.1;Parent=gene-ACYKK2_001252;Dbxref=NCBI_GP:HIH2231889.1;Name=HIH2231889.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344143.1;locus_tag=ACYKK2_001252;product=molybdopterin adenylyltransferase;protein_id=HIH2231889.1;transl_table=11 DBLQKW010000026.1 tpg gene 8937 9122 . - . ID=gene-ACYKK2_001253;Name=ACYKK2_001253;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001253 DBLQKW010000026.1 Protein Homology CDS 8937 9122 . - 0 ID=cds-HIH2231890.1;Parent=gene-ACYKK2_001253;Dbxref=NCBI_GP:HIH2231890.1;Name=HIH2231890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344142.1;locus_tag=ACYKK2_001253;product=molybdenum cofactor biosynthesis protein;protein_id=HIH2231890.1;transl_table=11 DBLQKW010000026.1 tpg gene 9250 10437 . + . ID=gene-ACYKK2_001254;Name=ACYKK2_001254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001254 DBLQKW010000026.1 Protein Homology CDS 9250 10437 . + 0 ID=cds-HIH2231891.1;Parent=gene-ACYKK2_001254;Dbxref=NCBI_GP:HIH2231891.1;Name=HIH2231891.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344141.1;locus_tag=ACYKK2_001254;product=M48 family metallopeptidase;protein_id=HIH2231891.1;transl_table=11 DBLQKW010000026.1 tpg gene 10434 11249 . + . ID=gene-ACYKK2_001255;Name=ACYKK2_001255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001255 DBLQKW010000026.1 Protein Homology CDS 10434 11249 . + 0 ID=cds-HIH2231892.1;Parent=gene-ACYKK2_001255;Dbxref=NCBI_GP:HIH2231892.1;Name=HIH2231892.1;Ontology_term=GO:0032259,GO:0003676,GO:0008168,GO:1904047;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344140.1;locus_tag=ACYKK2_001255;product=HemK/PrmC family methyltransferase;protein_id=HIH2231892.1;transl_table=11 DBLQKW010000026.1 tpg gene 11262 11732 . + . ID=gene-ACYKK2_001256;Name=ACYKK2_001256;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001256 DBLQKW010000026.1 Protein Homology CDS 11262 11732 . + 0 ID=cds-HIH2231893.1;Parent=gene-ACYKK2_001256;Dbxref=NCBI_GP:HIH2231893.1;Name=HIH2231893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344139.1;locus_tag=ACYKK2_001256;product=DUF4149 domain-containing protein;protein_id=HIH2231893.1;transl_table=11 DBLQKW010000026.1 tpg gene 11771 12520 . + . ID=gene-ACYKK2_001257;Name=flaC;gbkey=Gene;gene=flaC;gene_biotype=protein_coding;locus_tag=ACYKK2_001257 DBLQKW010000026.1 Protein Homology CDS 11771 12520 . + 0 ID=cds-HIH2231894.1;Parent=gene-ACYKK2_001257;Dbxref=NCBI_GP:HIH2231894.1;Name=HIH2231894.1;gbkey=CDS;gene=flaC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344138.1;locus_tag=ACYKK2_001257;product=flagellin C;protein_id=HIH2231894.1;transl_table=11 DBLQKW010000026.1 tpg gene 12555 13187 . + . ID=gene-ACYKK2_001258;Name=ACYKK2_001258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001258 DBLQKW010000026.1 Protein Homology CDS 12555 13187 . + 0 ID=cds-HIH2231895.1;Parent=gene-ACYKK2_001258;Dbxref=NCBI_GP:HIH2231895.1;Name=HIH2231895.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344137.1;locus_tag=ACYKK2_001258;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=HIH2231895.1;transl_table=11 DBLQKW010000026.1 tpg gene 13199 16801 . - . ID=gene-ACYKK2_001259;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=ACYKK2_001259 DBLQKW010000026.1 Protein Homology CDS 13199 16801 . - 0 ID=cds-HIH2231896.1;Parent=gene-ACYKK2_001259;Dbxref=NCBI_GP:HIH2231896.1;Name=HIH2231896.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344136.1;locus_tag=ACYKK2_001259;product=DNA polymerase III subunit alpha;protein_id=HIH2231896.1;transl_table=11 DBLQKW010000026.1 tpg gene 16994 17236 . + . ID=gene-ACYKK2_001260;Name=ACYKK2_001260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001260 DBLQKW010000026.1 Protein Homology CDS 16994 17236 . + 0 ID=cds-HIH2231897.1;Parent=gene-ACYKK2_001260;Dbxref=NCBI_GP:HIH2231897.1;Name=HIH2231897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_255349556.1;locus_tag=ACYKK2_001260;product=SelT/SelW/SelH family (seleno)protein;protein_id=HIH2231897.1;transl_except=(pos:17024..17026%2Caa:Sec);transl_table=11 DBLQKW010000026.1 tpg gene 17249 17578 . - . ID=gene-ACYKK2_001261;Name=ACYKK2_001261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001261 DBLQKW010000026.1 Protein Homology CDS 17249 17578 . - 0 ID=cds-HIH2231898.1;Parent=gene-ACYKK2_001261;Dbxref=NCBI_GP:HIH2231898.1;Name=HIH2231898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344135.1;locus_tag=ACYKK2_001261;product=ArsC/Spx/MgsR family protein;protein_id=HIH2231898.1;transl_table=11 DBLQKW010000026.1 tpg gene 17575 18915 . - . ID=gene-ACYKK2_001262;Name=ACYKK2_001262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001262 DBLQKW010000026.1 Protein Homology CDS 17575 18915 . - 0 ID=cds-HIH2231899.1;Parent=gene-ACYKK2_001262;Dbxref=NCBI_GP:HIH2231899.1;Name=HIH2231899.1;Ontology_term=GO:0009073,GO:0009423,GO:0003849;gbkey=CDS;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344134.1;locus_tag=ACYKK2_001262;product=class II 3-deoxy-7-phosphoheptulonate synthase;protein_id=HIH2231899.1;transl_table=11 DBLQKW010000026.1 tpg gene 18939 19352 . - . ID=gene-ACYKK2_001263;Name=uraH;gbkey=Gene;gene=uraH;gene_biotype=protein_coding;locus_tag=ACYKK2_001263 DBLQKW010000026.1 Protein Homology CDS 18939 19352 . - 0 ID=cds-HIH2231900.1;Parent=gene-ACYKK2_001263;Dbxref=NCBI_GP:HIH2231900.1;Name=HIH2231900.1;Ontology_term=GO:0006144,GO:0033971;gbkey=CDS;gene=uraH;go_function=hydroxyisourate hydrolase activity|0033971||IEA;go_process=purine nucleobase metabolic process|0006144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344133.1;locus_tag=ACYKK2_001263;product=hydroxyisourate hydrolase;protein_id=HIH2231900.1;transl_table=11 ##sequence-region DBLQKW010000027.1 1 18398 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000027.1 tpg region 1 18398 . + . ID=DBLQKW010000027.1:1..18398;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000027.1 tpg gene 15 1445 . + . ID=gene-ACYKK2_001264;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=ACYKK2_001264 DBLQKW010000027.1 Protein Homology CDS 15 1445 . + 0 ID=cds-HIH2231901.1;Parent=gene-ACYKK2_001264;Dbxref=NCBI_GP:HIH2231901.1;Name=HIH2231901.1;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344117.1;locus_tag=ACYKK2_001264;product=type I glutamate--ammonia ligase;protein_id=HIH2231901.1;transl_table=11 DBLQKW010000027.1 tpg gene 1512 2303 . - . ID=gene-ACYKK2_001265;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=ACYKK2_001265 DBLQKW010000027.1 Protein Homology CDS 1512 2303 . - 0 ID=cds-HIH2231902.1;Parent=gene-ACYKK2_001265;Dbxref=NCBI_GP:HIH2231902.1;Name=HIH2231902.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344116.1;locus_tag=ACYKK2_001265;product=flagellar basal-body rod protein FlgG;protein_id=HIH2231902.1;transl_table=11 DBLQKW010000027.1 tpg gene 2332 3144 . - . ID=gene-ACYKK2_001266;Name=ACYKK2_001266;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001266 DBLQKW010000027.1 Protein Homology CDS 2332 3144 . - 0 ID=cds-HIH2231903.1;Parent=gene-ACYKK2_001266;Dbxref=NCBI_GP:HIH2231903.1;Name=HIH2231903.1;Ontology_term=GO:0071973,GO:0009425;gbkey=CDS;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344115.1;locus_tag=ACYKK2_001266;product=flagellar hook-basal body protein;protein_id=HIH2231903.1;transl_table=11 DBLQKW010000027.1 tpg gene 3300 4412 . - . ID=gene-ACYKK2_001267;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=ACYKK2_001267 DBLQKW010000027.1 Protein Homology CDS 3300 4412 . - 0 ID=cds-HIH2231904.1;Parent=gene-ACYKK2_001267;Dbxref=NCBI_GP:HIH2231904.1;Name=HIH2231904.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344114.1;locus_tag=ACYKK2_001267;product=cell division protein FtsZ;protein_id=HIH2231904.1;transl_table=11 DBLQKW010000027.1 tpg gene 4428 5816 . - . ID=gene-ACYKK2_001268;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=ACYKK2_001268 DBLQKW010000027.1 Protein Homology CDS 4428 5816 . - 0 ID=cds-HIH2231905.1;Parent=gene-ACYKK2_001268;Dbxref=NCBI_GP:HIH2231905.1;Name=HIH2231905.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344113.1;locus_tag=ACYKK2_001268;product=cell division protein FtsA;protein_id=HIH2231905.1;transl_table=11 DBLQKW010000027.1 tpg gene 5813 7303 . - . ID=gene-ACYKK2_001269;Name=ACYKK2_001269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001269 DBLQKW010000027.1 Protein Homology CDS 5813 7303 . - 0 ID=cds-HIH2231906.1;Parent=gene-ACYKK2_001269;Dbxref=NCBI_GP:HIH2231906.1;Name=HIH2231906.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344112.1;locus_tag=ACYKK2_001269;product=peptidylprolyl isomerase;protein_id=HIH2231906.1;transl_table=11 DBLQKW010000027.1 tpg gene 7462 8400 . + . ID=gene-ACYKK2_001270;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=ACYKK2_001270 DBLQKW010000027.1 Protein Homology CDS 7462 8400 . + 0 ID=cds-HIH2231907.1;Parent=gene-ACYKK2_001270;Dbxref=NCBI_GP:HIH2231907.1;Name=HIH2231907.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344111.1;locus_tag=ACYKK2_001270;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=HIH2231907.1;transl_table=11 DBLQKW010000027.1 tpg gene 8400 9338 . + . ID=gene-ACYKK2_001271;Name=ACYKK2_001271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001271 DBLQKW010000027.1 Protein Homology CDS 8400 9338 . + 0 ID=cds-HIH2231908.1;Parent=gene-ACYKK2_001271;Dbxref=NCBI_GP:HIH2231908.1;Name=HIH2231908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344110.1;locus_tag=ACYKK2_001271;product=hypothetical protein;protein_id=HIH2231908.1;transl_table=11 DBLQKW010000027.1 tpg gene 9326 9817 . - . ID=gene-ACYKK2_001272;Name=ACYKK2_001272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001272 DBLQKW010000027.1 Protein Homology CDS 9326 9817 . - 0 ID=cds-HIH2231909.1;Parent=gene-ACYKK2_001272;Dbxref=NCBI_GP:HIH2231909.1;Name=HIH2231909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344109.1;locus_tag=ACYKK2_001272;product=hypothetical protein;protein_id=HIH2231909.1;transl_table=11 DBLQKW010000027.1 tpg pseudogene 10033 13719 . + . ID=gene-ACYKK2_001273;Name=ACYKK2_001273;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001273;pseudo=true DBLQKW010000027.1 Protein Homology CDS 10033 13719 . + 0 ID=cds-ACYKK2_001273;Parent=gene-ACYKK2_001273;Note=internal stop;Ontology_term=GO:0006304,GO:0003677,GO:0003824;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344108.1;locus_tag=ACYKK2_001273;product=Eco57I restriction-modification methylase domain-containing protein;pseudo=true;transl_table=11 DBLQKW010000027.1 tpg gene 13747 14937 . - . ID=gene-ACYKK2_001274;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=ACYKK2_001274 DBLQKW010000027.1 Protein Homology CDS 13747 14937 . - 0 ID=cds-HIH2231910.1;Parent=gene-ACYKK2_001274;Dbxref=NCBI_GP:HIH2231910.1;Name=HIH2231910.1;Ontology_term=GO:0006085,GO:0016310,GO:0000287,GO:0005524,GO:0008776;gbkey=CDS;gene=ackA;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,acetate kinase activity|0008776||IEA;go_process=acetyl-CoA biosynthetic process|0006085||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344107.1;locus_tag=ACYKK2_001274;product=acetate kinase;protein_id=HIH2231910.1;transl_table=11 DBLQKW010000027.1 tpg gene 14951 16456 . - . ID=gene-ACYKK2_001275;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=ACYKK2_001275 DBLQKW010000027.1 Protein Homology CDS 14951 16456 . - 0 ID=cds-HIH2231911.1;Parent=gene-ACYKK2_001275;Dbxref=NCBI_GP:HIH2231911.1;Name=HIH2231911.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344106.1;locus_tag=ACYKK2_001275;product=phosphate acetyltransferase;protein_id=HIH2231911.1;transl_table=11 DBLQKW010000027.1 tpg gene 16546 17244 . + . ID=gene-ACYKK2_001276;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=ACYKK2_001276 DBLQKW010000027.1 Protein Homology CDS 16546 17244 . + 0 ID=cds-HIH2231912.1;Parent=gene-ACYKK2_001276;Dbxref=NCBI_GP:HIH2231912.1;Name=HIH2231912.1;gbkey=CDS;gene=flgH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344105.1;locus_tag=ACYKK2_001276;product=flagellar basal body L-ring protein FlgH;protein_id=HIH2231912.1;transl_table=11 DBLQKW010000027.1 tpg gene 17274 18347 . - . ID=gene-ACYKK2_001277;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=ACYKK2_001277 DBLQKW010000027.1 Protein Homology CDS 17274 18347 . - 0 ID=cds-HIH2231913.1;Parent=gene-ACYKK2_001277;Dbxref=NCBI_GP:HIH2231913.1;Name=HIH2231913.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344104.1;locus_tag=ACYKK2_001277;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=HIH2231913.1;transl_table=11 ##sequence-region DBLQKW010000028.1 1 18365 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000028.1 tpg region 1 18365 . + . ID=DBLQKW010000028.1:1..18365;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000028.1 tpg gene 118 864 . + . ID=gene-ACYKK2_001278;Name=ACYKK2_001278;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001278 DBLQKW010000028.1 Protein Homology CDS 118 864 . + 0 ID=cds-HIH2231914.1;Parent=gene-ACYKK2_001278;Dbxref=NCBI_GP:HIH2231914.1;Name=HIH2231914.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.6;locus_tag=ACYKK2_001278;product=MFS transporter;protein_id=HIH2231914.1;transl_table=11 DBLQKW010000028.1 tpg gene 865 1290 . + . ID=gene-ACYKK2_001279;Name=ACYKK2_001279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001279 DBLQKW010000028.1 Protein Homology CDS 865 1290 . + 0 ID=cds-HIH2231915.1;Parent=gene-ACYKK2_001279;Dbxref=NCBI_GP:HIH2231915.1;Name=HIH2231915.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.6;locus_tag=ACYKK2_001279;product=MFS transporter;protein_id=HIH2231915.1;transl_table=11 DBLQKW010000028.1 tpg gene 1554 2306 . + . ID=gene-ACYKK2_001280;Name=peb3;gbkey=Gene;gene=peb3;gene_biotype=protein_coding;locus_tag=ACYKK2_001280 DBLQKW010000028.1 Protein Homology CDS 1554 2306 . + 0 ID=cds-HIH2231916.1;Parent=gene-ACYKK2_001280;Dbxref=NCBI_GP:HIH2231916.1;Name=HIH2231916.1;gbkey=CDS;gene=peb3;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343730.1;locus_tag=ACYKK2_001280;product=AcfC family glycoprotein adhesin PEB3;protein_id=HIH2231916.1;transl_table=11 DBLQKW010000028.1 tpg gene 2403 3497 . + . ID=gene-ACYKK2_001281;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=ACYKK2_001281 DBLQKW010000028.1 Protein Homology CDS 2403 3497 . + 0 ID=cds-HIH2231917.1;Parent=gene-ACYKK2_001281;Dbxref=NCBI_GP:HIH2231917.1;Name=HIH2231917.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343729.1;locus_tag=ACYKK2_001281;product=lipid-A-disaccharide synthase;protein_id=HIH2231917.1;transl_table=11 DBLQKW010000028.1 tpg gene 3509 3994 . + . ID=gene-ACYKK2_001282;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=ACYKK2_001282 DBLQKW010000028.1 Protein Homology CDS 3509 3994 . + 0 ID=cds-HIH2231918.1;Parent=gene-ACYKK2_001282;Dbxref=NCBI_GP:HIH2231918.1;Name=HIH2231918.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343728.1;locus_tag=ACYKK2_001282;product=transcription elongation factor GreA;protein_id=HIH2231918.1;transl_table=11 DBLQKW010000028.1 tpg gene 4004 4762 . + . ID=gene-ACYKK2_001283;Name=ACYKK2_001283;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001283 DBLQKW010000028.1 Protein Homology CDS 4004 4762 . + 0 ID=cds-HIH2231919.1;Parent=gene-ACYKK2_001283;Dbxref=NCBI_GP:HIH2231919.1;Name=HIH2231919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012662069.1;locus_tag=ACYKK2_001283;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=HIH2231919.1;transl_table=11 DBLQKW010000028.1 tpg gene 4755 5711 . + . ID=gene-ACYKK2_001284;Name=cheV;gbkey=Gene;gene=cheV;gene_biotype=protein_coding;locus_tag=ACYKK2_001284 DBLQKW010000028.1 Protein Homology CDS 4755 5711 . + 0 ID=cds-HIH2231920.1;Parent=gene-ACYKK2_001284;Dbxref=NCBI_GP:HIH2231920.1;Name=HIH2231920.1;Ontology_term=GO:0000160,GO:0006935,GO:0000156;gbkey=CDS;gene=cheV;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343726.1;locus_tag=ACYKK2_001284;product=chemotaxis protein;protein_id=HIH2231920.1;transl_table=11 DBLQKW010000028.1 tpg gene 5715 8024 . + . ID=gene-ACYKK2_001285;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=ACYKK2_001285 DBLQKW010000028.1 Protein Homology CDS 5715 8024 . + 0 ID=cds-HIH2231921.1;Parent=gene-ACYKK2_001285;Dbxref=NCBI_GP:HIH2231921.1;Name=HIH2231921.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343725.1;locus_tag=ACYKK2_001285;product=hybrid sensor histidine kinase/response regulator;protein_id=HIH2231921.1;transl_table=11 DBLQKW010000028.1 tpg gene 8029 8550 . + . ID=gene-ACYKK2_001286;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=ACYKK2_001286 DBLQKW010000028.1 Protein Homology CDS 8029 8550 . + 0 ID=cds-HIH2231922.1;Parent=gene-ACYKK2_001286;Dbxref=NCBI_GP:HIH2231922.1;Name=HIH2231922.1;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;gene=cheW;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343724.1;locus_tag=ACYKK2_001286;product=chemotaxis protein CheW;protein_id=HIH2231922.1;transl_table=11 DBLQKW010000028.1 tpg gene 8550 9173 . + . ID=gene-ACYKK2_001287;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=ACYKK2_001287 DBLQKW010000028.1 Protein Homology CDS 8550 9173 . + 0 ID=cds-HIH2231923.1;Parent=gene-ACYKK2_001287;Dbxref=NCBI_GP:HIH2231923.1;Name=HIH2231923.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343723.1;locus_tag=ACYKK2_001287;product=phosphoserine phosphatase SerB;protein_id=HIH2231923.1;transl_table=11 DBLQKW010000028.1 tpg gene 9173 10150 . + . ID=gene-ACYKK2_001288;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=ACYKK2_001288 DBLQKW010000028.1 Protein Homology CDS 9173 10150 . + 0 ID=cds-HIH2231924.1;Parent=gene-ACYKK2_001288;Dbxref=NCBI_GP:HIH2231924.1;Name=HIH2231924.1;gbkey=CDS;gene=tal;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343722.1;locus_tag=ACYKK2_001288;product=transaldolase;protein_id=HIH2231924.1;transl_table=11 DBLQKW010000028.1 tpg gene 10151 10573 . - . ID=gene-ACYKK2_001289;Name=ACYKK2_001289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001289 DBLQKW010000028.1 Protein Homology CDS 10151 10573 . - 0 ID=cds-HIH2231925.1;Parent=gene-ACYKK2_001289;Dbxref=NCBI_GP:HIH2231925.1;Name=HIH2231925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343721.1;locus_tag=ACYKK2_001289;product=Sua5 YciO YrdC YwlC family protein;protein_id=HIH2231925.1;transl_table=11 DBLQKW010000028.1 tpg gene 10570 13839 . - . ID=gene-ACYKK2_001290;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=ACYKK2_001290 DBLQKW010000028.1 Protein Homology CDS 10570 13839 . - 0 ID=cds-HIH2231926.1;Parent=gene-ACYKK2_001290;Dbxref=NCBI_GP:HIH2231926.1;Name=HIH2231926.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343720.1;locus_tag=ACYKK2_001290;product=carbamoyl-phosphate synthase large subunit;protein_id=HIH2231926.1;transl_table=11 DBLQKW010000028.1 tpg gene 14100 14849 . - . ID=gene-ACYKK2_001291;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=ACYKK2_001291 DBLQKW010000028.1 Protein Homology CDS 14100 14849 . - 0 ID=cds-HIH2231927.1;Parent=gene-ACYKK2_001291;Dbxref=NCBI_GP:HIH2231927.1;Name=HIH2231927.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343719.1;locus_tag=ACYKK2_001291;product=rod shape-determining protein MreC;protein_id=HIH2231927.1;transl_table=11 DBLQKW010000028.1 tpg gene 14839 15879 . - . ID=gene-ACYKK2_001292;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=ACYKK2_001292 DBLQKW010000028.1 Protein Homology CDS 14839 15879 . - 0 ID=cds-HIH2231928.1;Parent=gene-ACYKK2_001292;Dbxref=NCBI_GP:HIH2231928.1;Name=HIH2231928.1;Ontology_term=GO:0000902,GO:0008360,GO:0005524,GO:0005737;gbkey=CDS;gene=mreB;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA;go_process=cell morphogenesis|0000902||IEA,regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343718.1;locus_tag=ACYKK2_001292;product=rod shape-determining protein;protein_id=HIH2231928.1;transl_table=11 DBLQKW010000028.1 tpg gene 15890 17113 . - . ID=gene-ACYKK2_001293;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=ACYKK2_001293 DBLQKW010000028.1 Protein Homology CDS 15890 17113 . - 0 ID=cds-HIH2231929.1;Parent=gene-ACYKK2_001293;Dbxref=NCBI_GP:HIH2231929.1;Name=HIH2231929.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936863.1;locus_tag=ACYKK2_001293;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=HIH2231929.1;transl_table=11 DBLQKW010000028.1 tpg gene 17106 17897 . - . ID=gene-ACYKK2_001294;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=ACYKK2_001294 DBLQKW010000028.1 Protein Homology CDS 17106 17897 . - 0 ID=cds-HIH2231930.1;Parent=gene-ACYKK2_001294;Dbxref=NCBI_GP:HIH2231930.1;Name=HIH2231930.1;Ontology_term=GO:0009245,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343716.1;locus_tag=ACYKK2_001294;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=HIH2231930.1;transl_table=11 DBLQKW010000028.1 tpg gene 17897 18337 . - . ID=gene-ACYKK2_001295;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=ACYKK2_001295 DBLQKW010000028.1 Protein Homology CDS 17897 18337 . - 0 ID=cds-HIH2231931.1;Parent=gene-ACYKK2_001295;Dbxref=NCBI_GP:HIH2231931.1;Name=HIH2231931.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343715.1;locus_tag=ACYKK2_001295;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=HIH2231931.1;transl_table=11 ##sequence-region DBLQKW010000029.1 1 17637 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000029.1 tpg region 1 17637 . + . ID=DBLQKW010000029.1:1..17637;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000029.1 tpg gene 1 1292 . - . ID=gene-ACYKK2_001296;Name=ACYKK2_001296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001296;partial=true;start_range=.,1 DBLQKW010000029.1 Protein Homology CDS 1 1292 . - 0 ID=cds-HIH2231932.1;Parent=gene-ACYKK2_001296;Dbxref=NCBI_GP:HIH2231932.1;Name=HIH2231932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344729.1;locus_tag=ACYKK2_001296;partial=true;product=6-hydroxymethylpterin diphosphokinase MptE-like protein;protein_id=HIH2231932.1;start_range=.,1;transl_table=11 DBLQKW010000029.1 tpg pseudogene 1302 2550 . - . ID=gene-ACYKK2_001297;Name=ACYKK2_001297;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001297;pseudo=true DBLQKW010000029.1 Protein Homology CDS 1302 2550 . - 0 ID=cds-ACYKK2_001297;Parent=gene-ACYKK2_001297;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344730.1;locus_tag=ACYKK2_001297;product=DUF2920 family protein;pseudo=true;transl_table=11 DBLQKW010000029.1 tpg gene 2550 3065 . - . ID=gene-ACYKK2_001298;Name=ACYKK2_001298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001298 DBLQKW010000029.1 Protein Homology CDS 2550 3065 . - 0 ID=cds-HIH2231933.1;Parent=gene-ACYKK2_001298;Dbxref=NCBI_GP:HIH2231933.1;Name=HIH2231933.1;Ontology_term=GO:0015628,GO:0005886,GO:0015627;gbkey=CDS;go_component=plasma membrane|0005886||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344731.1;locus_tag=ACYKK2_001298;product=type II secretion system protein;protein_id=HIH2231933.1;transl_table=11 DBLQKW010000029.1 tpg gene 3066 4073 . - . ID=gene-ACYKK2_001299;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=ACYKK2_001299 DBLQKW010000029.1 Protein Homology CDS 3066 4073 . - 0 ID=cds-HIH2231934.1;Parent=gene-ACYKK2_001299;Dbxref=NCBI_GP:HIH2231934.1;Name=HIH2231934.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344732.1;locus_tag=ACYKK2_001299;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=HIH2231934.1;transl_table=11 DBLQKW010000029.1 tpg gene 4070 5464 . - . ID=gene-ACYKK2_001300;Name=ACYKK2_001300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001300 DBLQKW010000029.1 Protein Homology CDS 4070 5464 . - 0 ID=cds-HIH2231935.1;Parent=gene-ACYKK2_001300;Dbxref=NCBI_GP:HIH2231935.1;Name=HIH2231935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344733.1;locus_tag=ACYKK2_001300;product=M99 family carboxypeptidase catalytic domain-containing protein;protein_id=HIH2231935.1;transl_table=11 DBLQKW010000029.1 tpg gene 5466 6536 . - . ID=gene-ACYKK2_001301;Name=dxr;gbkey=Gene;gene=dxr;gene_biotype=protein_coding;locus_tag=ACYKK2_001301 DBLQKW010000029.1 Protein Homology CDS 5466 6536 . - 0 ID=cds-HIH2231936.1;Parent=gene-ACYKK2_001301;Dbxref=NCBI_GP:HIH2231936.1;Name=HIH2231936.1;Ontology_term=GO:0008299,GO:0019288,GO:0030604,GO:0046872,GO:0005737;gbkey=CDS;gene=dxr;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344734.1;locus_tag=ACYKK2_001301;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=HIH2231936.1;transl_table=11 DBLQKW010000029.1 tpg gene 6533 7258 . - . ID=gene-ACYKK2_001302;Name=ACYKK2_001302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001302 DBLQKW010000029.1 Protein Homology CDS 6533 7258 . - 0 ID=cds-HIH2231937.1;Parent=gene-ACYKK2_001302;Dbxref=NCBI_GP:HIH2231937.1;Name=HIH2231937.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344735.1;locus_tag=ACYKK2_001302;product=phosphatidate cytidylyltransferase;protein_id=HIH2231937.1;transl_table=11 DBLQKW010000029.1 tpg gene 7267 7605 . - . ID=gene-ACYKK2_001303;Name=ACYKK2_001303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001303 DBLQKW010000029.1 Protein Homology CDS 7267 7605 . - 0 ID=cds-HIH2231938.1;Parent=gene-ACYKK2_001303;Dbxref=NCBI_GP:HIH2231938.1;Name=HIH2231938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344736.1;locus_tag=ACYKK2_001303;product=hypothetical protein;protein_id=HIH2231938.1;transl_table=11 DBLQKW010000029.1 tpg gene 7607 8914 . - . ID=gene-ACYKK2_001304;Name=ACYKK2_001304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001304 DBLQKW010000029.1 Protein Homology CDS 7607 8914 . - 0 ID=cds-HIH2231939.1;Parent=gene-ACYKK2_001304;Dbxref=NCBI_GP:HIH2231939.1;Name=HIH2231939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344737.1;locus_tag=ACYKK2_001304;product=NFACT RNA binding domain-containing protein;protein_id=HIH2231939.1;transl_table=11 DBLQKW010000029.1 tpg gene 8976 9551 . + . ID=gene-ACYKK2_001305;Name=ACYKK2_001305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001305 DBLQKW010000029.1 Protein Homology CDS 8976 9551 . + 0 ID=cds-HIH2231940.1;Parent=gene-ACYKK2_001305;Dbxref=NCBI_GP:HIH2231940.1;Name=HIH2231940.1;Ontology_term=GO:0005525,GO:0061603;gbkey=CDS;go_function=GTP binding|0005525||IEA,molybdenum cofactor guanylyltransferase activity|0061603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344738.1;locus_tag=ACYKK2_001305;product=molybdenum cofactor guanylyltransferase;protein_id=HIH2231940.1;transl_table=11 DBLQKW010000029.1 tpg gene 9548 10537 . + . ID=gene-ACYKK2_001306;Name=ACYKK2_001306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001306 DBLQKW010000029.1 Protein Homology CDS 9548 10537 . + 0 ID=cds-HIH2231941.1;Parent=gene-ACYKK2_001306;Dbxref=NCBI_GP:HIH2231941.1;Name=HIH2231941.1;Ontology_term=GO:0006629,GO:0004620,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344739.1;locus_tag=ACYKK2_001306;product=phospholipase A;protein_id=HIH2231941.1;transl_table=11 DBLQKW010000029.1 tpg pseudogene 10623 11591 . + . ID=gene-ACYKK2_001307;Name=ceuB;gbkey=Gene;gene=ceuB;gene_biotype=pseudogene;locus_tag=ACYKK2_001307;pseudo=true DBLQKW010000029.1 Protein Homology CDS 10623 11591 . + 0 ID=cds-ACYKK2_001307;Parent=gene-ACYKK2_001307;Note=internal stop;gbkey=CDS;gene=ceuB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344740.1;locus_tag=ACYKK2_001307;product=enterochelin ABC transporter permease CeuB;pseudo=true;transl_table=11 DBLQKW010000029.1 tpg gene 11584 12522 . + . ID=gene-ACYKK2_001308;Name=ceuC;gbkey=Gene;gene=ceuC;gene_biotype=protein_coding;locus_tag=ACYKK2_001308 DBLQKW010000029.1 Protein Homology CDS 11584 12522 . + 0 ID=cds-HIH2231942.1;Parent=gene-ACYKK2_001308;Dbxref=NCBI_GP:HIH2231942.1;Name=HIH2231942.1;gbkey=CDS;gene=ceuC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344741.1;locus_tag=ACYKK2_001308;product=enterochelin ABC transporter permease CeuC;protein_id=HIH2231942.1;transl_table=11 DBLQKW010000029.1 tpg gene 12519 13274 . + . ID=gene-ACYKK2_001309;Name=ceuD;gbkey=Gene;gene=ceuD;gene_biotype=protein_coding;locus_tag=ACYKK2_001309 DBLQKW010000029.1 Protein Homology CDS 12519 13274 . + 0 ID=cds-HIH2231943.1;Parent=gene-ACYKK2_001309;Dbxref=NCBI_GP:HIH2231943.1;Name=HIH2231943.1;gbkey=CDS;gene=ceuD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344742.1;locus_tag=ACYKK2_001309;product=enterochelin ABC transporter ATP-binding protein CeuD;protein_id=HIH2231943.1;transl_table=11 DBLQKW010000029.1 tpg gene 13287 14279 . + . ID=gene-ACYKK2_001310;Name=ceuE;gbkey=Gene;gene=ceuE;gene_biotype=protein_coding;locus_tag=ACYKK2_001310 DBLQKW010000029.1 Protein Homology CDS 13287 14279 . + 0 ID=cds-HIH2231944.1;Parent=gene-ACYKK2_001310;Dbxref=NCBI_GP:HIH2231944.1;Name=HIH2231944.1;gbkey=CDS;gene=ceuE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344743.1;locus_tag=ACYKK2_001310;product=enterochelin ABC transporter substrate-binding protein CeuE;protein_id=HIH2231944.1;transl_table=11 DBLQKW010000029.1 tpg gene 14352 14441 . - . ID=gene-ACYKK2_001311;Name=ACYKK2_001311;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_001311 DBLQKW010000029.1 tRNAscan-SE tRNA 14352 14441 . - . ID=rna-ACYKK2_001311;Parent=gene-ACYKK2_001311;anticodon=(pos:complement(14405..14407));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001311;product=tRNA-Ser DBLQKW010000029.1 tRNAscan-SE exon 14352 14441 . - . ID=exon-ACYKK2_001311-1;Parent=rna-ACYKK2_001311;anticodon=(pos:complement(14405..14407));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001311;product=tRNA-Ser DBLQKW010000029.1 tpg gene 14505 15059 . - . ID=gene-ACYKK2_001312;Name=ACYKK2_001312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001312 DBLQKW010000029.1 Protein Homology CDS 14505 15059 . - 0 ID=cds-HIH2231945.1;Parent=gene-ACYKK2_001312;Dbxref=NCBI_GP:HIH2231945.1;Name=HIH2231945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344744.1;locus_tag=ACYKK2_001312;product=hypothetical protein;protein_id=HIH2231945.1;transl_table=11 DBLQKW010000029.1 tpg gene 15194 17026 . - . ID=gene-ACYKK2_001313;Name=ACYKK2_001313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001313 DBLQKW010000029.1 Protein Homology CDS 15194 17026 . - 0 ID=cds-HIH2231946.1;Parent=gene-ACYKK2_001313;Dbxref=NCBI_GP:HIH2231946.1;Name=HIH2231946.1;Ontology_term=GO:0008152,GO:0042279,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_function=nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344745.1;locus_tag=ACYKK2_001313;product=ammonia-forming cytochrome c nitrite reductase subunit c552;protein_id=HIH2231946.1;transl_table=11 DBLQKW010000029.1 tpg gene 17041 17556 . - . ID=gene-ACYKK2_001314;Name=nrfH;gbkey=Gene;gene=nrfH;gene_biotype=protein_coding;locus_tag=ACYKK2_001314 DBLQKW010000029.1 Protein Homology CDS 17041 17556 . - 0 ID=cds-HIH2231947.1;Parent=gene-ACYKK2_001314;Dbxref=NCBI_GP:HIH2231947.1;Name=HIH2231947.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=nrfH;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344746.1;locus_tag=ACYKK2_001314;product=cytochrome c nitrite reductase small subunit;protein_id=HIH2231947.1;transl_table=11 ##sequence-region DBLQKW010000030.1 1 17585 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000030.1 tpg region 1 17585 . + . ID=DBLQKW010000030.1:1..17585;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000030.1 tpg gene 1 980 . - . ID=gene-ACYKK2_001315;Name=tupC;gbkey=Gene;gene=tupC;gene_biotype=protein_coding;locus_tag=ACYKK2_001315;partial=true;start_range=.,1 DBLQKW010000030.1 Protein Homology CDS 1 980 . - 0 ID=cds-HIH2231948.1;Parent=gene-ACYKK2_001315;Dbxref=NCBI_GP:HIH2231948.1;Name=HIH2231948.1;Ontology_term=GO:0005524,GO:0016887,GO:1901238;gbkey=CDS;gene=tupC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type tungstate transporter activity|1901238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344910.1;locus_tag=ACYKK2_001315;partial=true;product=tungstate ABC transporter ATP-binding protein TupC;protein_id=HIH2231948.1;start_range=.,1;transl_table=11 DBLQKW010000030.1 tpg gene 982 1668 . - . ID=gene-ACYKK2_001316;Name=tupB;gbkey=Gene;gene=tupB;gene_biotype=protein_coding;locus_tag=ACYKK2_001316 DBLQKW010000030.1 Protein Homology CDS 982 1668 . - 0 ID=cds-HIH2231949.1;Parent=gene-ACYKK2_001316;Dbxref=NCBI_GP:HIH2231949.1;Name=HIH2231949.1;Ontology_term=GO:1901238;gbkey=CDS;gene=tupB;go_function=ABC-type tungstate transporter activity|1901238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002874119.1;locus_tag=ACYKK2_001316;product=tungstate ABC transporter permease TupB;protein_id=HIH2231949.1;transl_table=11 DBLQKW010000030.1 tpg gene 1747 2556 . + . ID=gene-ACYKK2_001317;Name=tupA;gbkey=Gene;gene=tupA;gene_biotype=protein_coding;locus_tag=ACYKK2_001317 DBLQKW010000030.1 Protein Homology CDS 1747 2556 . + 0 ID=cds-HIH2231950.1;Parent=gene-ACYKK2_001317;Dbxref=NCBI_GP:HIH2231950.1;Name=HIH2231950.1;Ontology_term=GO:1901238;gbkey=CDS;gene=tupA;go_function=ABC-type tungstate transporter activity|1901238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344912.1;locus_tag=ACYKK2_001317;product=tungstate ABC transporter substrate-binding protein TupA;protein_id=HIH2231950.1;transl_table=11 DBLQKW010000030.1 tpg gene 2698 3465 . + . ID=gene-ACYKK2_001318;Name=ACYKK2_001318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001318 DBLQKW010000030.1 Protein Homology CDS 2698 3465 . + 0 ID=cds-HIH2231951.1;Parent=gene-ACYKK2_001318;Dbxref=NCBI_GP:HIH2231951.1;Name=HIH2231951.1;Ontology_term=GO:0005975,GO:0005524,GO:0016810,GO:0017168;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344913.1;locus_tag=ACYKK2_001318;product=LamB/YcsF family protein;protein_id=HIH2231951.1;transl_table=11 DBLQKW010000030.1 tpg gene 3475 4215 . + . ID=gene-ACYKK2_001319;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=ACYKK2_001319 DBLQKW010000030.1 Protein Homology CDS 3475 4215 . + 0 ID=cds-HIH2231952.1;Parent=gene-ACYKK2_001319;Dbxref=NCBI_GP:HIH2231952.1;Name=HIH2231952.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344914.1;locus_tag=ACYKK2_001319;product=5-oxoprolinase subunit PxpB;protein_id=HIH2231952.1;transl_table=11 DBLQKW010000030.1 tpg gene 4196 5161 . + . ID=gene-ACYKK2_001320;Name=ACYKK2_001320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001320 DBLQKW010000030.1 Protein Homology CDS 4196 5161 . + 0 ID=cds-HIH2231953.1;Parent=gene-ACYKK2_001320;Dbxref=NCBI_GP:HIH2231953.1;Name=HIH2231953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344915.1;locus_tag=ACYKK2_001320;product=biotin-dependent carboxyltransferase family protein;protein_id=HIH2231953.1;transl_table=11 DBLQKW010000030.1 tpg gene 5158 6054 . - . ID=gene-ACYKK2_001321;Name=ACYKK2_001321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001321 DBLQKW010000030.1 Protein Homology CDS 5158 6054 . - 0 ID=cds-HIH2231954.1;Parent=gene-ACYKK2_001321;Dbxref=NCBI_GP:HIH2231954.1;Name=HIH2231954.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344916.1;locus_tag=ACYKK2_001321;product=DMT family transporter;protein_id=HIH2231954.1;transl_table=11 DBLQKW010000030.1 tpg gene 6087 6665 . - . ID=gene-ACYKK2_001322;Name=ACYKK2_001322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001322 DBLQKW010000030.1 Protein Homology CDS 6087 6665 . - 0 ID=cds-HIH2231955.1;Parent=gene-ACYKK2_001322;Dbxref=NCBI_GP:HIH2231955.1;Name=HIH2231955.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344917.1;locus_tag=ACYKK2_001322;product=NAD(P)H-dependent oxidoreductase;protein_id=HIH2231955.1;transl_table=11 DBLQKW010000030.1 tpg gene 6765 7112 . + . ID=gene-ACYKK2_001323;Name=rrpA;gbkey=Gene;gene=rrpA;gene_biotype=protein_coding;locus_tag=ACYKK2_001323 DBLQKW010000030.1 Protein Homology CDS 6765 7112 . + 0 ID=cds-HIH2231956.1;Parent=gene-ACYKK2_001323;Dbxref=NCBI_GP:HIH2231956.1;Name=HIH2231956.1;gbkey=CDS;gene=rrpA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344918.1;locus_tag=ACYKK2_001323;product=MarR family transcription factor RrpA;protein_id=HIH2231956.1;transl_table=11 DBLQKW010000030.1 tpg gene 7100 7549 . + . ID=gene-ACYKK2_001324;Name=ACYKK2_001324;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001324 DBLQKW010000030.1 Protein Homology CDS 7100 7549 . + 0 ID=cds-HIH2231957.1;Parent=gene-ACYKK2_001324;Dbxref=NCBI_GP:HIH2231957.1;Name=HIH2231957.1;Ontology_term=GO:0006950,GO:0008289,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=lipid binding|0008289||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344919.1;locus_tag=ACYKK2_001324;product=lipocalin family protein;protein_id=HIH2231957.1;transl_table=11 DBLQKW010000030.1 tpg gene 7551 8627 . - . ID=gene-ACYKK2_001325;Name=ACYKK2_001325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001325 DBLQKW010000030.1 Protein Homology CDS 7551 8627 . - 0 ID=cds-HIH2231958.1;Parent=gene-ACYKK2_001325;Dbxref=NCBI_GP:HIH2231958.1;Name=HIH2231958.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344920.1;locus_tag=ACYKK2_001325;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=HIH2231958.1;transl_table=11 DBLQKW010000030.1 tpg gene 8855 11950 . - . ID=gene-ACYKK2_001326;Name=hsdR;gbkey=Gene;gene=hsdR;gene_biotype=protein_coding;locus_tag=ACYKK2_001326 DBLQKW010000030.1 Protein Homology CDS 8855 11950 . - 0 ID=cds-HIH2231959.1;Parent=gene-ACYKK2_001326;Dbxref=NCBI_GP:HIH2231959.1;Name=HIH2231959.1;Ontology_term=GO:0009307,GO:0003677,GO:0004386,GO:0005524,GO:0009035,GO:0016887;gbkey=CDS;gene=hsdR;go_function=DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,type I site-specific deoxyribonuclease activity|0009035||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344921.1;locus_tag=ACYKK2_001326;product=type I restriction endonuclease subunit R;protein_id=HIH2231959.1;transl_table=11 DBLQKW010000030.1 tpg gene 11953 13719 . - . ID=gene-ACYKK2_001327;Name=rloH;gbkey=Gene;gene=rloH;gene_biotype=protein_coding;locus_tag=ACYKK2_001327 DBLQKW010000030.1 Protein Homology CDS 11953 13719 . - 0 ID=cds-HIH2231960.1;Parent=gene-ACYKK2_001327;Dbxref=NCBI_GP:HIH2231960.1;Name=HIH2231960.1;Ontology_term=GO:0004519,GO:0004527,GO:0005524,GO:0016887,GO:0046872;gbkey=CDS;gene=rloH;go_function=endonuclease activity|0004519||IEA,exonuclease activity|0004527||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344922.1;locus_tag=ACYKK2_001327;product=ATP-dependent nuclease;protein_id=HIH2231960.1;transl_table=11 DBLQKW010000030.1 tpg gene 13730 14872 . - . ID=gene-ACYKK2_001328;Name=hsdS;gbkey=Gene;gene=hsdS;gene_biotype=protein_coding;locus_tag=ACYKK2_001328 DBLQKW010000030.1 Protein Homology CDS 13730 14872 . - 0 ID=cds-HIH2231961.1;Parent=gene-ACYKK2_001328;Dbxref=NCBI_GP:HIH2231961.1;Name=HIH2231961.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;gene=hsdS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.6;locus_tag=ACYKK2_001328;product=restriction endonuclease subunit S;protein_id=HIH2231961.1;transl_table=11 DBLQKW010000030.1 tpg gene 15005 16507 . - . ID=gene-ACYKK2_001329;Name=hsdM;gbkey=Gene;gene=hsdM;gene_biotype=protein_coding;locus_tag=ACYKK2_001329 DBLQKW010000030.1 Protein Homology CDS 15005 16507 . - 0 ID=cds-HIH2231962.1;Parent=gene-ACYKK2_001329;Dbxref=NCBI_GP:HIH2231962.1;Name=HIH2231962.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;gene=hsdM;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344925.1;locus_tag=ACYKK2_001329;product=N-6 DNA methylase;protein_id=HIH2231962.1;transl_table=11 DBLQKW010000030.1 tpg pseudogene 16562 16853 . + . ID=gene-ACYKK2_001330;Name=ACYKK2_001330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001330;pseudo=true DBLQKW010000030.1 Protein Homology CDS 16562 16853 . + 0 ID=cds-ACYKK2_001330;Parent=gene-ACYKK2_001330;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002920362.1;locus_tag=ACYKK2_001330;product=SAM-dependent DNA methyltransferase;pseudo=true;transl_table=11 DBLQKW010000030.1 tpg pseudogene 16865 17499 . - . ID=gene-ACYKK2_001331;Name=ACYKK2_001331;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001331;pseudo=true DBLQKW010000030.1 Protein Homology CDS 16865 17499 . - 0 ID=cds-ACYKK2_001331;Parent=gene-ACYKK2_001331;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344926.1;locus_tag=ACYKK2_001331;product=NAD(P)H-binding protein;pseudo=true;transl_table=11 ##sequence-region DBLQKW010000031.1 1 17554 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000031.1 tpg region 1 17554 . + . ID=DBLQKW010000031.1:1..17554;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000031.1 tpg gene 66 2168 . + . ID=gene-ACYKK2_001332;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=ACYKK2_001332 DBLQKW010000031.1 Protein Homology CDS 66 2168 . + 0 ID=cds-HIH2231963.1;Parent=gene-ACYKK2_001332;Dbxref=NCBI_GP:HIH2231963.1;Name=HIH2231963.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345052.1;locus_tag=ACYKK2_001332;product=type I DNA topoisomerase;protein_id=HIH2231963.1;transl_table=11 DBLQKW010000031.1 tpg gene 2170 3006 . + . ID=gene-ACYKK2_001333;Name=ACYKK2_001333;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001333 DBLQKW010000031.1 Protein Homology CDS 2170 3006 . + 0 ID=cds-HIH2231964.1;Parent=gene-ACYKK2_001333;Dbxref=NCBI_GP:HIH2231964.1;Name=HIH2231964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345051.1;locus_tag=ACYKK2_001333;product=biotin synthase;protein_id=HIH2231964.1;transl_table=11 DBLQKW010000031.1 tpg gene 2987 4162 . + . ID=gene-ACYKK2_001334;Name=ACYKK2_001334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001334 DBLQKW010000031.1 Protein Homology CDS 2987 4162 . + 0 ID=cds-HIH2231965.1;Parent=gene-ACYKK2_001334;Dbxref=NCBI_GP:HIH2231965.1;Name=HIH2231965.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345050.1;locus_tag=ACYKK2_001334;product=cation:proton antiporter;protein_id=HIH2231965.1;transl_table=11 DBLQKW010000031.1 tpg gene 4277 5545 . + . ID=gene-ACYKK2_001335;Name=ACYKK2_001335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001335 DBLQKW010000031.1 Protein Homology CDS 4277 5545 . + 0 ID=cds-HIH2231966.1;Parent=gene-ACYKK2_001335;Dbxref=NCBI_GP:HIH2231966.1;Name=HIH2231966.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345049.1;locus_tag=ACYKK2_001335;product=citrate synthase;protein_id=HIH2231966.1;transl_table=11 DBLQKW010000031.1 tpg gene 5625 6389 . + . ID=gene-ACYKK2_001336;Name=ACYKK2_001336;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001336 DBLQKW010000031.1 Protein Homology CDS 5625 6389 . + 0 ID=cds-HIH2231967.1;Parent=gene-ACYKK2_001336;Dbxref=NCBI_GP:HIH2231967.1;Name=HIH2231967.1;Ontology_term=GO:0006790,GO:0000287,GO:0008441;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345048.1;locus_tag=ACYKK2_001336;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=HIH2231967.1;transl_table=11 DBLQKW010000031.1 tpg gene 6429 7193 . + . ID=gene-ACYKK2_001337;Name=ACYKK2_001337;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001337 DBLQKW010000031.1 Protein Homology CDS 6429 7193 . + 0 ID=cds-HIH2231968.1;Parent=gene-ACYKK2_001337;Dbxref=NCBI_GP:HIH2231968.1;Name=HIH2231968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002860119.1;locus_tag=ACYKK2_001337;product=hypothetical protein;protein_id=HIH2231968.1;transl_table=11 DBLQKW010000031.1 tpg gene 7201 7977 . - . ID=gene-ACYKK2_001338;Name=ACYKK2_001338;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001338 DBLQKW010000031.1 Protein Homology CDS 7201 7977 . - 0 ID=cds-HIH2231969.1;Parent=gene-ACYKK2_001338;Dbxref=NCBI_GP:HIH2231969.1;Name=HIH2231969.1;Ontology_term=GO:0008762,GO:0050660;gbkey=CDS;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345044.1;locus_tag=ACYKK2_001338;product=UDP-N-acetylmuramate dehydrogenase;protein_id=HIH2231969.1;transl_table=11 DBLQKW010000031.1 tpg gene 7974 8243 . - . ID=gene-ACYKK2_001339;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=ACYKK2_001339 DBLQKW010000031.1 Protein Homology CDS 7974 8243 . - 0 ID=cds-HIH2231970.1;Parent=gene-ACYKK2_001339;Dbxref=NCBI_GP:HIH2231970.1;Name=HIH2231970.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345043.1;locus_tag=ACYKK2_001339;product=flagellar biosynthesis protein FliQ;protein_id=HIH2231970.1;transl_table=11 DBLQKW010000031.1 tpg gene 8255 9115 . - . ID=gene-ACYKK2_001340;Name=ACYKK2_001340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001340 DBLQKW010000031.1 Protein Homology CDS 8255 9115 . - 0 ID=cds-HIH2231971.1;Parent=gene-ACYKK2_001340;Dbxref=NCBI_GP:HIH2231971.1;Name=HIH2231971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345042.1;locus_tag=ACYKK2_001340;product=menaquinone biosynthesis family protein;protein_id=HIH2231971.1;transl_table=11 DBLQKW010000031.1 tpg gene 9222 10253 . + . ID=gene-ACYKK2_001341;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=ACYKK2_001341 DBLQKW010000031.1 Protein Homology CDS 9222 10253 . + 0 ID=cds-HIH2231972.1;Parent=gene-ACYKK2_001341;Dbxref=NCBI_GP:HIH2231972.1;Name=HIH2231972.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345041.1;locus_tag=ACYKK2_001341;product=recombinase RecA;protein_id=HIH2231972.1;transl_table=11 DBLQKW010000031.1 tpg gene 10253 11497 . + . ID=gene-ACYKK2_001342;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=ACYKK2_001342 DBLQKW010000031.1 Protein Homology CDS 10253 11497 . + 0 ID=cds-HIH2231973.1;Parent=gene-ACYKK2_001342;Dbxref=NCBI_GP:HIH2231973.1;Name=HIH2231973.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345040.1;locus_tag=ACYKK2_001342;product=phosphopyruvate hydratase;protein_id=HIH2231973.1;transl_table=11 DBLQKW010000031.1 tpg gene 11563 11766 . + . ID=gene-ACYKK2_001343;Name=ACYKK2_001343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001343 DBLQKW010000031.1 Protein Homology CDS 11563 11766 . + 0 ID=cds-HIH2231974.1;Parent=gene-ACYKK2_001343;Dbxref=NCBI_GP:HIH2231974.1;Name=HIH2231974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345039.1;locus_tag=ACYKK2_001343;product=hypothetical protein;protein_id=HIH2231974.1;transl_table=11 DBLQKW010000031.1 tpg gene 11756 12418 . + . ID=gene-ACYKK2_001344;Name=cgpA;gbkey=Gene;gene=cgpA;gene_biotype=protein_coding;locus_tag=ACYKK2_001344 DBLQKW010000031.1 Protein Homology CDS 11756 12418 . + 0 ID=cds-HIH2231975.1;Parent=gene-ACYKK2_001344;Dbxref=NCBI_GP:HIH2231975.1;Name=HIH2231975.1;gbkey=CDS;gene=cgpA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345038.1;locus_tag=ACYKK2_001344;product=glycoprotein CgpA;protein_id=HIH2231975.1;transl_table=11 DBLQKW010000031.1 tpg gene 12418 13266 . + . ID=gene-ACYKK2_001345;Name=ACYKK2_001345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001345 DBLQKW010000031.1 Protein Homology CDS 12418 13266 . + 0 ID=cds-HIH2231976.1;Parent=gene-ACYKK2_001345;Dbxref=NCBI_GP:HIH2231976.1;Name=HIH2231976.1;Ontology_term=GO:0006281,GO:0006310,GO:0003910,GO:0005524;gbkey=CDS;go_function=DNA ligase (ATP) activity|0003910||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345037.1;locus_tag=ACYKK2_001345;product=DNA ligase;protein_id=HIH2231976.1;transl_table=11 DBLQKW010000031.1 tpg gene 13309 13386 . + . ID=gene-ACYKK2_001346;Name=ACYKK2_001346;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_001346 DBLQKW010000031.1 tRNAscan-SE tRNA 13309 13386 . + . ID=rna-ACYKK2_001346;Parent=gene-ACYKK2_001346;anticodon=(pos:13344..13346);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001346;product=tRNA-Pro DBLQKW010000031.1 tRNAscan-SE exon 13309 13386 . + . ID=exon-ACYKK2_001346-1;Parent=rna-ACYKK2_001346;anticodon=(pos:13344..13346);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001346;product=tRNA-Pro DBLQKW010000031.1 tpg gene 13411 13487 . + . ID=gene-ACYKK2_001347;Name=ACYKK2_001347;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_001347 DBLQKW010000031.1 tRNAscan-SE tRNA 13411 13487 . + . ID=rna-ACYKK2_001347;Parent=gene-ACYKK2_001347;anticodon=(pos:13445..13447);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001347;product=tRNA-His DBLQKW010000031.1 tRNAscan-SE exon 13411 13487 . + . ID=exon-ACYKK2_001347-1;Parent=rna-ACYKK2_001347;anticodon=(pos:13445..13447);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001347;product=tRNA-His DBLQKW010000031.1 tpg gene 13491 13567 . + . ID=gene-ACYKK2_001348;Name=ACYKK2_001348;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_001348 DBLQKW010000031.1 tRNAscan-SE tRNA 13491 13567 . + . ID=rna-ACYKK2_001348;Parent=gene-ACYKK2_001348;anticodon=(pos:13525..13527);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001348;product=tRNA-Arg DBLQKW010000031.1 tRNAscan-SE exon 13491 13567 . + . ID=exon-ACYKK2_001348-1;Parent=rna-ACYKK2_001348;anticodon=(pos:13525..13527);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001348;product=tRNA-Arg DBLQKW010000031.1 tpg gene 13582 13658 . + . ID=gene-ACYKK2_001349;Name=ACYKK2_001349;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_001349 DBLQKW010000031.1 tRNAscan-SE tRNA 13582 13658 . + . ID=rna-ACYKK2_001349;Parent=gene-ACYKK2_001349;anticodon=(pos:13616..13618);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001349;product=tRNA-Arg DBLQKW010000031.1 tRNAscan-SE exon 13582 13658 . + . ID=exon-ACYKK2_001349-1;Parent=rna-ACYKK2_001349;anticodon=(pos:13616..13618);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001349;product=tRNA-Arg DBLQKW010000031.1 tpg gene 13663 13747 . + . ID=gene-ACYKK2_001350;Name=ACYKK2_001350;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_001350 DBLQKW010000031.1 tRNAscan-SE tRNA 13663 13747 . + . ID=rna-ACYKK2_001350;Parent=gene-ACYKK2_001350;anticodon=(pos:13697..13699);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001350;product=tRNA-Leu DBLQKW010000031.1 tRNAscan-SE exon 13663 13747 . + . ID=exon-ACYKK2_001350-1;Parent=rna-ACYKK2_001350;anticodon=(pos:13697..13699);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001350;product=tRNA-Leu DBLQKW010000031.1 tpg gene 14045 15184 . + . ID=gene-ACYKK2_001351;Name=ACYKK2_001351;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001351 DBLQKW010000031.1 Protein Homology CDS 14045 15184 . + 0 ID=cds-HIH2231977.1;Parent=gene-ACYKK2_001351;Dbxref=NCBI_GP:HIH2231977.1;Name=HIH2231977.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF012798.6;locus_tag=ACYKK2_001351;product=tyrosine-type recombinase/integrase;protein_id=HIH2231977.1;transl_table=11 DBLQKW010000031.1 tpg gene 15187 15399 . + . ID=gene-ACYKK2_001352;Name=ACYKK2_001352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001352 DBLQKW010000031.1 Protein Homology CDS 15187 15399 . + 0 ID=cds-HIH2231978.1;Parent=gene-ACYKK2_001352;Dbxref=NCBI_GP:HIH2231978.1;Name=HIH2231978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001946292.1;locus_tag=ACYKK2_001352;product=hypothetical protein;protein_id=HIH2231978.1;transl_table=11 DBLQKW010000031.1 tpg gene 15387 15827 . + . ID=gene-ACYKK2_001353;Name=ACYKK2_001353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001353 DBLQKW010000031.1 GeneMarkS-2+ CDS 15387 15827 . + 0 ID=cds-HIH2231979.1;Parent=gene-ACYKK2_001353;Dbxref=NCBI_GP:HIH2231979.1;Name=HIH2231979.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001353;product=hypothetical protein;protein_id=HIH2231979.1;transl_table=11 DBLQKW010000031.1 tpg gene 15946 16173 . + . ID=gene-ACYKK2_001354;Name=ACYKK2_001354;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001354 DBLQKW010000031.1 Protein Homology CDS 15946 16173 . + 0 ID=cds-HIH2231980.1;Parent=gene-ACYKK2_001354;Dbxref=NCBI_GP:HIH2231980.1;Name=HIH2231980.1;Ontology_term=GO:0003729;gbkey=CDS;go_function=mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002869696.1;locus_tag=ACYKK2_001354;product=type II toxin-antitoxin system HicA family toxin;protein_id=HIH2231980.1;transl_table=11 DBLQKW010000031.1 tpg gene 16170 16538 . + . ID=gene-ACYKK2_001355;Name=ACYKK2_001355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001355 DBLQKW010000031.1 Protein Homology CDS 16170 16538 . + 0 ID=cds-HIH2231981.1;Parent=gene-ACYKK2_001355;Dbxref=NCBI_GP:HIH2231981.1;Name=HIH2231981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894268.1;locus_tag=ACYKK2_001355;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=HIH2231981.1;transl_table=11 DBLQKW010000031.1 tpg gene 16549 16686 . + . ID=gene-ACYKK2_001356;Name=ACYKK2_001356;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001356 DBLQKW010000031.1 Protein Homology CDS 16549 16686 . + 0 ID=cds-HIH2231982.1;Parent=gene-ACYKK2_001356;Dbxref=NCBI_GP:HIH2231982.1;Name=HIH2231982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002869697.1;locus_tag=ACYKK2_001356;product=hypothetical protein;protein_id=HIH2231982.1;transl_table=11 DBLQKW010000031.1 tpg gene 16724 17554 . + . ID=gene-ACYKK2_001357;Name=ACYKK2_001357;end_range=17554,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001357;partial=true DBLQKW010000031.1 GeneMarkS-2+ CDS 16724 17554 . + 0 ID=cds-HIH2231983.1;Parent=gene-ACYKK2_001357;Dbxref=NCBI_GP:HIH2231983.1;Name=HIH2231983.1;end_range=17554,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001357;partial=true;product=hypothetical protein;protein_id=HIH2231983.1;transl_table=11 ##sequence-region DBLQKW010000032.1 1 17504 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000032.1 tpg region 1 17504 . + . ID=DBLQKW010000032.1:1..17504;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000032.1 tpg gene 125 1906 . + . ID=gene-ACYKK2_001358;Name=ACYKK2_001358;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001358 DBLQKW010000032.1 Protein Homology CDS 125 1906 . + 0 ID=cds-HIH2231984.1;Parent=gene-ACYKK2_001358;Dbxref=NCBI_GP:HIH2231984.1;Name=HIH2231984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343605.1;locus_tag=ACYKK2_001358;product=PhoX family protein;protein_id=HIH2231984.1;transl_table=11 DBLQKW010000032.1 tpg gene 1944 2882 . - . ID=gene-ACYKK2_001359;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=ACYKK2_001359 DBLQKW010000032.1 Protein Homology CDS 1944 2882 . - 0 ID=cds-HIH2231985.1;Parent=gene-ACYKK2_001359;Dbxref=NCBI_GP:HIH2231985.1;Name=HIH2231985.1;Ontology_term=GO:0019430,GO:0004791,GO:0071949,GO:0005737;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||IEA;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA,FAD binding|0071949||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343606.1;locus_tag=ACYKK2_001359;product=thioredoxin-disulfide reductase;protein_id=HIH2231985.1;transl_table=11 DBLQKW010000032.1 tpg gene 3016 3330 . - . ID=gene-ACYKK2_001360;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=ACYKK2_001360 DBLQKW010000032.1 Protein Homology CDS 3016 3330 . - 0 ID=cds-HIH2231986.1;Parent=gene-ACYKK2_001360;Dbxref=NCBI_GP:HIH2231986.1;Name=HIH2231986.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343607.1;locus_tag=ACYKK2_001360;product=thioredoxin;protein_id=HIH2231986.1;transl_table=11 DBLQKW010000032.1 tpg gene 3387 3725 . - . ID=gene-ACYKK2_001361;Name=ACYKK2_001361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001361 DBLQKW010000032.1 Protein Homology CDS 3387 3725 . - 0 ID=cds-HIH2231987.1;Parent=gene-ACYKK2_001361;Dbxref=NCBI_GP:HIH2231987.1;Name=HIH2231987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343608.1;locus_tag=ACYKK2_001361;product=YraN family protein;protein_id=HIH2231987.1;transl_table=11 DBLQKW010000032.1 tpg gene 3725 4972 . - . ID=gene-ACYKK2_001362;Name=ACYKK2_001362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001362 DBLQKW010000032.1 Protein Homology CDS 3725 4972 . - 0 ID=cds-HIH2231988.1;Parent=gene-ACYKK2_001362;Dbxref=NCBI_GP:HIH2231988.1;Name=HIH2231988.1;Ontology_term=GO:0006520,GO:0004412;gbkey=CDS;go_function=homoserine dehydrogenase activity|0004412||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343609.1;locus_tag=ACYKK2_001362;product=homoserine dehydrogenase;protein_id=HIH2231988.1;transl_table=11 DBLQKW010000032.1 tpg gene 4976 6178 . - . ID=gene-ACYKK2_001363;Name=ACYKK2_001363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001363 DBLQKW010000032.1 Protein Homology CDS 4976 6178 . - 0 ID=cds-HIH2231989.1;Parent=gene-ACYKK2_001363;Dbxref=NCBI_GP:HIH2231989.1;Name=HIH2231989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343610.1;locus_tag=ACYKK2_001363;product=LL-diaminopimelate aminotransferase;protein_id=HIH2231989.1;transl_table=11 DBLQKW010000032.1 tpg gene 6190 6996 . - . ID=gene-ACYKK2_001364;Name=ACYKK2_001364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001364 DBLQKW010000032.1 Protein Homology CDS 6190 6996 . - 0 ID=cds-HIH2231990.1;Parent=gene-ACYKK2_001364;Dbxref=NCBI_GP:HIH2231990.1;Name=HIH2231990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343611.1;locus_tag=ACYKK2_001364;product=hypothetical protein;protein_id=HIH2231990.1;transl_table=11 DBLQKW010000032.1 tpg gene 6990 7928 . - . ID=gene-ACYKK2_001365;Name=ACYKK2_001365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001365 DBLQKW010000032.1 Protein Homology CDS 6990 7928 . - 0 ID=cds-HIH2231991.1;Parent=gene-ACYKK2_001365;Dbxref=NCBI_GP:HIH2231991.1;Name=HIH2231991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343612.1;locus_tag=ACYKK2_001365;product=hypothetical protein;protein_id=HIH2231991.1;transl_table=11 DBLQKW010000032.1 tpg gene 7921 8604 . - . ID=gene-ACYKK2_001366;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=ACYKK2_001366 DBLQKW010000032.1 Protein Homology CDS 7921 8604 . - 0 ID=cds-HIH2231992.1;Parent=gene-ACYKK2_001366;Dbxref=NCBI_GP:HIH2231992.1;Name=HIH2231992.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343613.1;locus_tag=ACYKK2_001366;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=HIH2231992.1;transl_table=11 DBLQKW010000032.1 tpg gene 8606 9442 . - . ID=gene-ACYKK2_001367;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=ACYKK2_001367 DBLQKW010000032.1 Protein Homology CDS 8606 9442 . - 0 ID=cds-HIH2231993.1;Parent=gene-ACYKK2_001367;Dbxref=NCBI_GP:HIH2231993.1;Name=HIH2231993.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002854625.1;locus_tag=ACYKK2_001367;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=HIH2231993.1;transl_table=11 DBLQKW010000032.1 tpg gene 9445 9645 . - . ID=gene-ACYKK2_001368;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=ACYKK2_001368 DBLQKW010000032.1 Protein Homology CDS 9445 9645 . - 0 ID=cds-HIH2231994.1;Parent=gene-ACYKK2_001368;Dbxref=NCBI_GP:HIH2231994.1;Name=HIH2231994.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343615.1;locus_tag=ACYKK2_001368;product=50S ribosomal protein L31;protein_id=HIH2231994.1;transl_table=11 DBLQKW010000032.1 tpg gene 9724 10380 . - . ID=gene-ACYKK2_001369;Name=ACYKK2_001369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001369 DBLQKW010000032.1 Protein Homology CDS 9724 10380 . - 0 ID=cds-HIH2231995.1;Parent=gene-ACYKK2_001369;Dbxref=NCBI_GP:HIH2231995.1;Name=HIH2231995.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343616.1;locus_tag=ACYKK2_001369;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=HIH2231995.1;transl_table=11 DBLQKW010000032.1 tpg gene 10382 10789 . - . ID=gene-ACYKK2_001370;Name=ACYKK2_001370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001370 DBLQKW010000032.1 Protein Homology CDS 10382 10789 . - 0 ID=cds-HIH2231996.1;Parent=gene-ACYKK2_001370;Dbxref=NCBI_GP:HIH2231996.1;Name=HIH2231996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343617.1;locus_tag=ACYKK2_001370;product=hypothetical protein;protein_id=HIH2231996.1;transl_table=11 DBLQKW010000032.1 tpg gene 10789 11214 . - . ID=gene-ACYKK2_001371;Name=ACYKK2_001371;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001371 DBLQKW010000032.1 Protein Homology CDS 10789 11214 . - 0 ID=cds-HIH2231997.1;Parent=gene-ACYKK2_001371;Dbxref=NCBI_GP:HIH2231997.1;Name=HIH2231997.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343618.1;locus_tag=ACYKK2_001371;product=c-type cytochrome;protein_id=HIH2231997.1;transl_table=11 DBLQKW010000032.1 tpg gene 11214 11795 . - . ID=gene-ACYKK2_001372;Name=ACYKK2_001372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001372 DBLQKW010000032.1 Protein Homology CDS 11214 11795 . - 0 ID=cds-HIH2231998.1;Parent=gene-ACYKK2_001372;Dbxref=NCBI_GP:HIH2231998.1;Name=HIH2231998.1;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343619.1;locus_tag=ACYKK2_001372;product=6-pyruvoyl trahydropterin synthase family protein;protein_id=HIH2231998.1;transl_table=11 DBLQKW010000032.1 tpg gene 11792 12535 . - . ID=gene-ACYKK2_001373;Name=ACYKK2_001373;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001373 DBLQKW010000032.1 Protein Homology CDS 11792 12535 . - 0 ID=cds-HIH2231999.1;Parent=gene-ACYKK2_001373;Dbxref=NCBI_GP:HIH2231999.1;Name=HIH2231999.1;Ontology_term=GO:0000287,GO:0016840,GO:0051539,GO:1904047;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,carbon-nitrogen lyase activity|0016840||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343620.1;locus_tag=ACYKK2_001373;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=HIH2231999.1;transl_table=11 DBLQKW010000032.1 tpg gene 12538 13500 . - . ID=gene-ACYKK2_001374;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=ACYKK2_001374 DBLQKW010000032.1 Protein Homology CDS 12538 13500 . - 0 ID=cds-HIH2232000.1;Parent=gene-ACYKK2_001374;Dbxref=NCBI_GP:HIH2232000.1;Name=HIH2232000.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343621.1;locus_tag=ACYKK2_001374;product=GTP 3'%2C8-cyclase MoaA;protein_id=HIH2232000.1;transl_table=11 DBLQKW010000032.1 tpg gene 13513 14028 . - . ID=gene-ACYKK2_001375;Name=ACYKK2_001375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001375 DBLQKW010000032.1 Protein Homology CDS 13513 14028 . - 0 ID=cds-HIH2232001.1;Parent=gene-ACYKK2_001375;Dbxref=NCBI_GP:HIH2232001.1;Name=HIH2232001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343622.1;locus_tag=ACYKK2_001375;product=DUF6115 domain-containing protein;protein_id=HIH2232001.1;transl_table=11 DBLQKW010000032.1 tpg gene 14025 14522 . - . ID=gene-ACYKK2_001376;Name=ACYKK2_001376;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001376 DBLQKW010000032.1 Protein Homology CDS 14025 14522 . - 0 ID=cds-HIH2232002.1;Parent=gene-ACYKK2_001376;Dbxref=NCBI_GP:HIH2232002.1;Name=HIH2232002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343623.1;locus_tag=ACYKK2_001376;product=hypothetical protein;protein_id=HIH2232002.1;transl_table=11 DBLQKW010000032.1 tpg gene 14513 15397 . - . ID=gene-ACYKK2_001377;Name=mqnP;gbkey=Gene;gene=mqnP;gene_biotype=protein_coding;locus_tag=ACYKK2_001377 DBLQKW010000032.1 Protein Homology CDS 14513 15397 . - 0 ID=cds-HIH2232003.1;Parent=gene-ACYKK2_001377;Dbxref=NCBI_GP:HIH2232003.1;Name=HIH2232003.1;gbkey=CDS;gene=mqnP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343624.1;locus_tag=ACYKK2_001377;product=menaquinone biosynthesis prenyltransferase MqnP;protein_id=HIH2232003.1;transl_table=11 DBLQKW010000032.1 tpg gene 15468 16337 . + . ID=gene-ACYKK2_001378;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=ACYKK2_001378 DBLQKW010000032.1 Protein Homology CDS 15468 16337 . + 0 ID=cds-HIH2232004.1;Parent=gene-ACYKK2_001378;Dbxref=NCBI_GP:HIH2232004.1;Name=HIH2232004.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343625.1;locus_tag=ACYKK2_001378;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=HIH2232004.1;transl_table=11 DBLQKW010000032.1 tpg gene 16323 16886 . - . ID=gene-ACYKK2_001379;Name=ACYKK2_001379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001379 DBLQKW010000032.1 Protein Homology CDS 16323 16886 . - 0 ID=cds-HIH2232005.1;Parent=gene-ACYKK2_001379;Dbxref=NCBI_GP:HIH2232005.1;Name=HIH2232005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343626.1;locus_tag=ACYKK2_001379;product=manganese efflux pump MntP family protein;protein_id=HIH2232005.1;transl_table=11 DBLQKW010000032.1 tpg gene 17034 17108 . + . ID=gene-ACYKK2_001380;Name=ACYKK2_001380;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_001380 DBLQKW010000032.1 tRNAscan-SE tRNA 17034 17108 . + . ID=rna-ACYKK2_001380;Parent=gene-ACYKK2_001380;anticodon=(pos:17067..17069);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001380;product=tRNA-Glu DBLQKW010000032.1 tRNAscan-SE exon 17034 17108 . + . ID=exon-ACYKK2_001380-1;Parent=rna-ACYKK2_001380;anticodon=(pos:17067..17069);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001380;product=tRNA-Glu DBLQKW010000032.1 tpg gene 17244 17426 . - . ID=gene-ACYKK2_001381;Name=ACYKK2_001381;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001381 DBLQKW010000032.1 Protein Homology CDS 17244 17426 . - 0 ID=cds-HIH2232006.1;Parent=gene-ACYKK2_001381;Dbxref=NCBI_GP:HIH2232006.1;Name=HIH2232006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343627.1;locus_tag=ACYKK2_001381;product=hypothetical protein;protein_id=HIH2232006.1;transl_table=11 ##sequence-region DBLQKW010000033.1 1 17002 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000033.1 tpg region 1 17002 . + . ID=DBLQKW010000033.1:1..17002;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000033.1 tpg gene 3 689 . + . ID=gene-ACYKK2_001382;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=ACYKK2_001382 DBLQKW010000033.1 Protein Homology CDS 3 689 . + 0 ID=cds-HIH2232007.1;Parent=gene-ACYKK2_001382;Dbxref=NCBI_GP:HIH2232007.1;Name=HIH2232007.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343546.1;locus_tag=ACYKK2_001382;product=uracil-DNA glycosylase;protein_id=HIH2232007.1;transl_table=11 DBLQKW010000033.1 tpg gene 699 1865 . - . ID=gene-ACYKK2_001383;Name=ACYKK2_001383;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001383 DBLQKW010000033.1 Protein Homology CDS 699 1865 . - 0 ID=cds-HIH2232008.1;Parent=gene-ACYKK2_001383;Dbxref=NCBI_GP:HIH2232008.1;Name=HIH2232008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343685.1;locus_tag=ACYKK2_001383;product=hypothetical protein;protein_id=HIH2232008.1;transl_table=11 DBLQKW010000033.1 tpg gene 2024 2215 . + . ID=gene-ACYKK2_001384;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=ACYKK2_001384 DBLQKW010000033.1 Protein Homology CDS 2024 2215 . + 0 ID=cds-HIH2232009.1;Parent=gene-ACYKK2_001384;Dbxref=NCBI_GP:HIH2232009.1;Name=HIH2232009.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343686.1;locus_tag=ACYKK2_001384;product=50S ribosomal protein L35;protein_id=HIH2232009.1;transl_table=11 DBLQKW010000033.1 tpg gene 2309 2662 . + . ID=gene-ACYKK2_001385;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=ACYKK2_001385 DBLQKW010000033.1 Protein Homology CDS 2309 2662 . + 0 ID=cds-HIH2232010.1;Parent=gene-ACYKK2_001385;Dbxref=NCBI_GP:HIH2232010.1;Name=HIH2232010.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343687.1;locus_tag=ACYKK2_001385;product=50S ribosomal protein L20;protein_id=HIH2232010.1;transl_table=11 DBLQKW010000033.1 tpg gene 3231 3797 . - . ID=gene-ACYKK2_001386;Name=ACYKK2_001386;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001386 DBLQKW010000033.1 Protein Homology CDS 3231 3797 . - 0 ID=cds-HIH2232011.1;Parent=gene-ACYKK2_001386;Dbxref=NCBI_GP:HIH2232011.1;Name=HIH2232011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002851848.1;locus_tag=ACYKK2_001386;product=FIST N-terminal domain-containing protein;protein_id=HIH2232011.1;transl_table=11 DBLQKW010000033.1 tpg gene 4279 5136 . + . ID=gene-ACYKK2_001387;Name=cheP;gbkey=Gene;gene=cheP;gene_biotype=protein_coding;locus_tag=ACYKK2_001387 DBLQKW010000033.1 Protein Homology CDS 4279 5136 . + 0 ID=cds-HIH2232012.1;Parent=gene-ACYKK2_001387;Dbxref=NCBI_GP:HIH2232012.1;Name=HIH2232012.1;gbkey=CDS;gene=cheP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002922676.1;locus_tag=ACYKK2_001387;product=cheVAW transcriptional regulator CheP;protein_id=HIH2232012.1;transl_table=11 DBLQKW010000033.1 tpg gene 5164 5643 . + . ID=gene-ACYKK2_001388;Name=cheQ;gbkey=Gene;gene=cheQ;gene_biotype=protein_coding;locus_tag=ACYKK2_001388 DBLQKW010000033.1 Protein Homology CDS 5164 5643 . + 0 ID=cds-HIH2232013.1;Parent=gene-ACYKK2_001388;Dbxref=NCBI_GP:HIH2232013.1;Name=HIH2232013.1;gbkey=CDS;gene=cheQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343691.1;locus_tag=ACYKK2_001388;product=cheVAW transcriptional regulator CheQ;protein_id=HIH2232013.1;transl_table=11 DBLQKW010000033.1 tpg gene 5612 6922 . - . ID=gene-ACYKK2_001389;Name=ACYKK2_001389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001389 DBLQKW010000033.1 Protein Homology CDS 5612 6922 . - 0 ID=cds-HIH2232014.1;Parent=gene-ACYKK2_001389;Dbxref=NCBI_GP:HIH2232014.1;Name=HIH2232014.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343692.1;locus_tag=ACYKK2_001389;product=MFS transporter;protein_id=HIH2232014.1;transl_table=11 DBLQKW010000033.1 tpg gene 6925 7080 . - . ID=gene-ACYKK2_001390;Name=ACYKK2_001390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001390 DBLQKW010000033.1 Protein Homology CDS 6925 7080 . - 0 ID=cds-HIH2232015.1;Parent=gene-ACYKK2_001390;Dbxref=NCBI_GP:HIH2232015.1;Name=HIH2232015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343693.1;locus_tag=ACYKK2_001390;product=highly acidic protein;protein_id=HIH2232015.1;transl_table=11 DBLQKW010000033.1 tpg gene 7173 7646 . + . ID=gene-ACYKK2_001391;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=ACYKK2_001391 DBLQKW010000033.1 Protein Homology CDS 7173 7646 . + 0 ID=cds-HIH2232016.1;Parent=gene-ACYKK2_001391;Dbxref=NCBI_GP:HIH2232016.1;Name=HIH2232016.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343694.1;locus_tag=ACYKK2_001391;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=HIH2232016.1;transl_table=11 DBLQKW010000033.1 tpg gene 7624 7887 . + . ID=gene-ACYKK2_001392;Name=ACYKK2_001392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001392 DBLQKW010000033.1 Protein Homology CDS 7624 7887 . + 0 ID=cds-HIH2232017.1;Parent=gene-ACYKK2_001392;Dbxref=NCBI_GP:HIH2232017.1;Name=HIH2232017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343695.1;locus_tag=ACYKK2_001392;product=HP0495 family protein;protein_id=HIH2232017.1;transl_table=11 DBLQKW010000033.1 tpg gene 7877 9037 . + . ID=gene-ACYKK2_001393;Name=ACYKK2_001393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001393 DBLQKW010000033.1 Protein Homology CDS 7877 9037 . + 0 ID=cds-HIH2232018.1;Parent=gene-ACYKK2_001393;Dbxref=NCBI_GP:HIH2232018.1;Name=HIH2232018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343696.1;locus_tag=ACYKK2_001393;product=hypothetical protein;protein_id=HIH2232018.1;transl_table=11 DBLQKW010000033.1 tpg gene 9056 9814 . - . ID=gene-ACYKK2_001394;Name=exoA;gbkey=Gene;gene=exoA;gene_biotype=protein_coding;locus_tag=ACYKK2_001394 DBLQKW010000033.1 Protein Homology CDS 9056 9814 . - 0 ID=cds-HIH2232019.1;Parent=gene-ACYKK2_001394;Dbxref=NCBI_GP:HIH2232019.1;Name=HIH2232019.1;Ontology_term=GO:0006281,GO:0004518;gbkey=CDS;gene=exoA;go_function=nuclease activity|0004518||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343697.1;locus_tag=ACYKK2_001394;product=exodeoxyribonuclease III;protein_id=HIH2232019.1;transl_table=11 DBLQKW010000033.1 tpg gene 9932 11470 . + . ID=gene-ACYKK2_001395;Name=eptC;gbkey=Gene;gene=eptC;gene_biotype=protein_coding;locus_tag=ACYKK2_001395 DBLQKW010000033.1 Protein Homology CDS 9932 11470 . + 0 ID=cds-HIH2232020.1;Parent=gene-ACYKK2_001395;Dbxref=NCBI_GP:HIH2232020.1;Name=HIH2232020.1;gbkey=CDS;gene=eptC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343698.1;locus_tag=ACYKK2_001395;product=lipid A/FlgG phosphoethanolamine transferase EptC;protein_id=HIH2232020.1;transl_table=11 DBLQKW010000033.1 tpg gene 11467 11823 . + . ID=gene-ACYKK2_001396;Name=dgkA;gbkey=Gene;gene=dgkA;gene_biotype=protein_coding;locus_tag=ACYKK2_001396 DBLQKW010000033.1 Protein Homology CDS 11467 11823 . + 0 ID=cds-HIH2232021.1;Parent=gene-ACYKK2_001396;Dbxref=NCBI_GP:HIH2232021.1;Name=HIH2232021.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872;gbkey=CDS;gene=dgkA;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343699.1;locus_tag=ACYKK2_001396;product=diacylglycerol kinase;protein_id=HIH2232021.1;transl_table=11 DBLQKW010000033.1 tpg pseudogene 11820 12064 . + . ID=gene-ACYKK2_001397;Name=ACYKK2_001397;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001397;pseudo=true DBLQKW010000033.1 Protein Homology CDS 11820 12064 . + 0 ID=cds-ACYKK2_001397;Parent=gene-ACYKK2_001397;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006260,GO:0006276;gbkey=CDS;go_process=DNA replication|0006260||IEA,plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343700.1;locus_tag=ACYKK2_001397;product=replication/maintenance protein RepL;pseudo=true;transl_table=11 DBLQKW010000033.1 tpg gene 12056 13051 . + . ID=gene-ACYKK2_001398;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=ACYKK2_001398 DBLQKW010000033.1 Protein Homology CDS 12056 13051 . + 0 ID=cds-HIH2232022.1;Parent=gene-ACYKK2_001398;Dbxref=NCBI_GP:HIH2232022.1;Name=HIH2232022.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011049649.1;locus_tag=ACYKK2_001398;product=dihydroorotase;protein_id=HIH2232022.1;transl_table=11 DBLQKW010000033.1 tpg gene 13061 16213 . + . ID=gene-ACYKK2_001399;Name=ACYKK2_001399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001399 DBLQKW010000033.1 Protein Homology CDS 13061 16213 . + 0 ID=cds-HIH2232023.1;Parent=gene-ACYKK2_001399;Dbxref=NCBI_GP:HIH2232023.1;Name=HIH2232023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002885378.1;locus_tag=ACYKK2_001399;product=type ISP restriction/modification enzyme;protein_id=HIH2232023.1;transl_table=11 DBLQKW010000033.1 tpg gene 16219 16932 . - . ID=gene-ACYKK2_001400;Name=ACYKK2_001400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001400 DBLQKW010000033.1 Protein Homology CDS 16219 16932 . - 0 ID=cds-HIH2232024.1;Parent=gene-ACYKK2_001400;Dbxref=NCBI_GP:HIH2232024.1;Name=HIH2232024.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002859418.1;locus_tag=ACYKK2_001400;product=class I SAM-dependent methyltransferase;protein_id=HIH2232024.1;transl_table=11 ##sequence-region DBLQKW010000034.1 1 16609 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000034.1 tpg region 1 16609 . + . ID=DBLQKW010000034.1:1..16609;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000034.1 tpg gene 12 749 . - . ID=gene-ACYKK2_001401;Name=ACYKK2_001401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001401 DBLQKW010000034.1 Protein Homology CDS 12 749 . - 0 ID=cds-HIH2232025.1;Parent=gene-ACYKK2_001401;Dbxref=NCBI_GP:HIH2232025.1;Name=HIH2232025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344886.1;locus_tag=ACYKK2_001401;product=winged helix-turn-helix domain-containing protein;protein_id=HIH2232025.1;transl_table=11 DBLQKW010000034.1 tpg gene 742 1524 . - . ID=gene-ACYKK2_001402;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=ACYKK2_001402 DBLQKW010000034.1 Protein Homology CDS 742 1524 . - 0 ID=cds-HIH2232026.1;Parent=gene-ACYKK2_001402;Dbxref=NCBI_GP:HIH2232026.1;Name=HIH2232026.1;Ontology_term=GO:0016783;gbkey=CDS;gene=fdhD;go_function=sulfurtransferase activity|0016783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344887.1;locus_tag=ACYKK2_001402;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=HIH2232026.1;transl_table=11 DBLQKW010000034.1 tpg gene 1691 2623 . - . ID=gene-ACYKK2_001403;Name=ACYKK2_001403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001403 DBLQKW010000034.1 Protein Homology CDS 1691 2623 . - 0 ID=cds-HIH2232027.1;Parent=gene-ACYKK2_001403;Dbxref=NCBI_GP:HIH2232027.1;Name=HIH2232027.1;Ontology_term=GO:0009061,GO:0008863,GO:0009055,GO:0009326;gbkey=CDS;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344888.1;locus_tag=ACYKK2_001403;product=formate dehydrogenase subunit gamma;protein_id=HIH2232027.1;transl_table=11 DBLQKW010000034.1 tpg gene 2620 3261 . - . ID=gene-ACYKK2_001404;Name=fdh3B;gbkey=Gene;gene=fdh3B;gene_biotype=protein_coding;locus_tag=ACYKK2_001404 DBLQKW010000034.1 Protein Homology CDS 2620 3261 . - 0 ID=cds-HIH2232028.1;Parent=gene-ACYKK2_001404;Dbxref=NCBI_GP:HIH2232028.1;Name=HIH2232028.1;Ontology_term=GO:0009055;gbkey=CDS;gene=fdh3B;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344889.1;locus_tag=ACYKK2_001404;product=formate dehydrogenase FDH3 subunit beta;protein_id=HIH2232028.1;transl_table=11 DBLQKW010000034.1 tpg gene 3258 6062 . - . ID=gene-ACYKK2_001405;Name=ACYKK2_001405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001405 DBLQKW010000034.1 Protein Homology CDS 3258 6062 . - 0 ID=cds-HIH2232029.1;Parent=gene-ACYKK2_001405;Dbxref=NCBI_GP:HIH2232029.1;Name=HIH2232029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344890.1;locus_tag=ACYKK2_001405;product=formate dehydrogenase subunit alpha;protein_id=HIH2232029.1;transl_except=(pos:complement(5520..5522)%2Caa:Sec);transl_table=11 DBLQKW010000034.1 tpg gene 6062 6253 . - . ID=gene-ACYKK2_001406;Name=ACYKK2_001406;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001406 DBLQKW010000034.1 Protein Homology CDS 6062 6253 . - 0 ID=cds-HIH2232030.1;Parent=gene-ACYKK2_001406;Dbxref=NCBI_GP:HIH2232030.1;Name=HIH2232030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344891.1;locus_tag=ACYKK2_001406;product=twin-arginine translocation signal domain-containing protein;protein_id=HIH2232030.1;transl_table=11 DBLQKW010000034.1 tpg gene 6228 6941 . - . ID=gene-ACYKK2_001407;Name=ACYKK2_001407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001407 DBLQKW010000034.1 Protein Homology CDS 6228 6941 . - 0 ID=cds-HIH2232031.1;Parent=gene-ACYKK2_001407;Dbxref=NCBI_GP:HIH2232031.1;Name=HIH2232031.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344892.1;locus_tag=ACYKK2_001407;product=TorD/DmsD family molecular chaperone;protein_id=HIH2232031.1;transl_table=11 DBLQKW010000034.1 tpg gene 7245 8393 . - . ID=gene-ACYKK2_001408;Name=nspC;gbkey=Gene;gene=nspC;gene_biotype=protein_coding;locus_tag=ACYKK2_001408 DBLQKW010000034.1 Protein Homology CDS 7245 8393 . - 0 ID=cds-HIH2232032.1;Parent=gene-ACYKK2_001408;Dbxref=NCBI_GP:HIH2232032.1;Name=HIH2232032.1;Ontology_term=GO:0045312,GO:0016831;gbkey=CDS;gene=nspC;go_function=carboxy-lyase activity|0016831||IEA;go_process=nor-spermidine biosynthetic process|0045312||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344893.1;locus_tag=ACYKK2_001408;product=carboxynorspermidine decarboxylase;protein_id=HIH2232032.1;transl_table=11 DBLQKW010000034.1 tpg gene 8517 10058 . + . ID=gene-ACYKK2_001409;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=ACYKK2_001409 DBLQKW010000034.1 Protein Homology CDS 8517 10058 . + 0 ID=cds-HIH2232033.1;Parent=gene-ACYKK2_001409;Dbxref=NCBI_GP:HIH2232033.1;Name=HIH2232033.1;gbkey=CDS;gene=cueO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344894.1;locus_tag=ACYKK2_001409;product=multicopper oxidase CueO;protein_id=HIH2232033.1;transl_table=11 DBLQKW010000034.1 tpg gene 10060 10281 . + . ID=gene-ACYKK2_001410;Name=ACYKK2_001410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001410 DBLQKW010000034.1 Protein Homology CDS 10060 10281 . + 0 ID=cds-HIH2232034.1;Parent=gene-ACYKK2_001410;Dbxref=NCBI_GP:HIH2232034.1;Name=HIH2232034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344895.1;locus_tag=ACYKK2_001410;product=MoaD/ThiS family protein;protein_id=HIH2232034.1;transl_table=11 DBLQKW010000034.1 tpg gene 10282 10728 . + . ID=gene-ACYKK2_001411;Name=ACYKK2_001411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001411 DBLQKW010000034.1 Protein Homology CDS 10282 10728 . + 0 ID=cds-HIH2232035.1;Parent=gene-ACYKK2_001411;Dbxref=NCBI_GP:HIH2232035.1;Name=HIH2232035.1;Ontology_term=GO:0006777,GO:0030366,GO:1990140;gbkey=CDS;go_component=molybdopterin synthase complex|1990140||IEA;go_function=molybdopterin synthase activity|0030366||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344896.1;locus_tag=ACYKK2_001411;product=molybdopterin synthase catalytic subunit;protein_id=HIH2232035.1;transl_table=11 DBLQKW010000034.1 tpg gene 10732 11922 . + . ID=gene-ACYKK2_001412;Name=ACYKK2_001412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001412 DBLQKW010000034.1 Protein Homology CDS 10732 11922 . + 0 ID=cds-HIH2232036.1;Parent=gene-ACYKK2_001412;Dbxref=NCBI_GP:HIH2232036.1;Name=HIH2232036.1;Ontology_term=GO:0030151,GO:0046872;gbkey=CDS;go_function=molybdenum ion binding|0030151||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344897.1;locus_tag=ACYKK2_001412;product=molybdopterin molybdotransferase MoeA;protein_id=HIH2232036.1;transl_table=11 DBLQKW010000034.1 tpg gene 12222 12653 . - . ID=gene-ACYKK2_001413;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=ACYKK2_001413 DBLQKW010000034.1 Protein Homology CDS 12222 12653 . - 0 ID=cds-HIH2232037.1;Parent=gene-ACYKK2_001413;Dbxref=NCBI_GP:HIH2232037.1;Name=HIH2232037.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006656554.1;locus_tag=ACYKK2_001413;product=CRISPR-associated endonuclease Cas2;protein_id=HIH2232037.1;transl_table=11 DBLQKW010000034.1 tpg gene 12646 13536 . - . ID=gene-ACYKK2_001414;Name=cas1;gbkey=Gene;gene=cas1;gene_biotype=protein_coding;locus_tag=ACYKK2_001414 DBLQKW010000034.1 Protein Homology CDS 12646 13536 . - 0 ID=cds-HIH2232038.1;Parent=gene-ACYKK2_001414;Dbxref=NCBI_GP:HIH2232038.1;Name=HIH2232038.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344899.1;locus_tag=ACYKK2_001414;product=type II CRISPR-associated endonuclease Cas1;protein_id=HIH2232038.1;transl_table=11 DBLQKW010000034.1 tpg pseudogene 13533 16486 . - . ID=gene-ACYKK2_001415;Name=cas9;gbkey=Gene;gene=cas9;gene_biotype=pseudogene;gene_synonym=csn1;locus_tag=ACYKK2_001415;pseudo=true DBLQKW010000034.1 Protein Homology CDS 13533 16486 . - 0 ID=cds-ACYKK2_001415;Parent=gene-ACYKK2_001415;Note=Cas9%2C originally named Csn1%2C is the large%2C multifunctional signature protein of type II CRISPR/Cas systems. It is well known even to general audiences because its RNA-guided endonuclease activity has made it a popular tool for custom editing of eukaryotic genomes.%3B frameshifted;Ontology_term=GO:0043571,GO:0004520;gbkey=CDS;gene=cas9;go_function=DNA endonuclease activity|0004520||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344900.1;locus_tag=ACYKK2_001415;product=type II CRISPR RNA-guided endonuclease Cas9;pseudo=true;transl_table=11 ##sequence-region DBLQKW010000035.1 1 14005 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000035.1 tpg region 1 14005 . + . ID=DBLQKW010000035.1:1..14005;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000035.1 tpg gene 40 1071 . + . ID=gene-ACYKK2_001416;Name=pseI;gbkey=Gene;gene=pseI;gene_biotype=protein_coding;locus_tag=ACYKK2_001416 DBLQKW010000035.1 Protein Homology CDS 40 1071 . + 0 ID=cds-HIH2232039.1;Parent=gene-ACYKK2_001416;Dbxref=NCBI_GP:HIH2232039.1;Name=HIH2232039.1;Ontology_term=GO:0016765;gbkey=CDS;gene=pseI;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014517277.1;locus_tag=ACYKK2_001416;product=pseudaminic acid synthase;protein_id=HIH2232039.1;transl_table=11 DBLQKW010000035.1 tpg gene 1068 2039 . + . ID=gene-ACYKK2_001417;Name=legB;gbkey=Gene;gene=legB;gene_biotype=protein_coding;locus_tag=ACYKK2_001417 DBLQKW010000035.1 Protein Homology CDS 1068 2039 . + 0 ID=cds-HIH2232040.1;Parent=gene-ACYKK2_001417;Dbxref=NCBI_GP:HIH2232040.1;Name=HIH2232040.1;gbkey=CDS;gene=legB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344709.1;locus_tag=ACYKK2_001417;product=4%2C6-dehydratase LegB;protein_id=HIH2232040.1;transl_table=11 DBLQKW010000035.1 tpg gene 2032 3186 . + . ID=gene-ACYKK2_001418;Name=legC;gbkey=Gene;gene=legC;gene_biotype=protein_coding;locus_tag=ACYKK2_001418 DBLQKW010000035.1 Protein Homology CDS 2032 3186 . + 0 ID=cds-HIH2232041.1;Parent=gene-ACYKK2_001418;Dbxref=NCBI_GP:HIH2232041.1;Name=HIH2232041.1;gbkey=CDS;gene=legC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344710.1;locus_tag=ACYKK2_001418;product=aminotransferase LegC;protein_id=HIH2232041.1;transl_table=11 DBLQKW010000035.1 tpg gene 3295 3837 . + . ID=gene-ACYKK2_001419;Name=ACYKK2_001419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001419 DBLQKW010000035.1 Protein Homology CDS 3295 3837 . + 0 ID=cds-HIH2232042.1;Parent=gene-ACYKK2_001419;Dbxref=NCBI_GP:HIH2232042.1;Name=HIH2232042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002815677.1;locus_tag=ACYKK2_001419;product=transferase;protein_id=HIH2232042.1;transl_table=11 DBLQKW010000035.1 tpg gene 3910 4230 . + . ID=gene-ACYKK2_001420;Name=ACYKK2_001420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001420 DBLQKW010000035.1 Protein Homology CDS 3910 4230 . + 0 ID=cds-HIH2232043.1;Parent=gene-ACYKK2_001420;Dbxref=NCBI_GP:HIH2232043.1;Name=HIH2232043.1;Ontology_term=GO:0006631,GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020247086.1;locus_tag=ACYKK2_001420;product=3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein;protein_id=HIH2232043.1;transl_table=11 DBLQKW010000035.1 tpg gene 4218 4604 . + . ID=gene-ACYKK2_001421;Name=ACYKK2_001421;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001421 DBLQKW010000035.1 GeneMarkS-2+ CDS 4218 4604 . + 0 ID=cds-HIH2232044.1;Parent=gene-ACYKK2_001421;Dbxref=NCBI_GP:HIH2232044.1;Name=HIH2232044.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001421;product=hypothetical protein;protein_id=HIH2232044.1;transl_table=11 DBLQKW010000035.1 tpg gene 4721 5842 . + . ID=gene-ACYKK2_001422;Name=ACYKK2_001422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001422 DBLQKW010000035.1 Protein Homology CDS 4721 5842 . + 0 ID=cds-HIH2232045.1;Parent=gene-ACYKK2_001422;Dbxref=NCBI_GP:HIH2232045.1;Name=HIH2232045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344714.1;locus_tag=ACYKK2_001422;product=N-acetyl sugar amidotransferase;protein_id=HIH2232045.1;transl_table=11 DBLQKW010000035.1 tpg pseudogene 5860 6535 . + . ID=gene-ACYKK2_001423;Name=ACYKK2_001423;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001423;pseudo=true DBLQKW010000035.1 Protein Homology CDS 5860 6535 . + 0 ID=cds-ACYKK2_001423;Parent=gene-ACYKK2_001423;Note=frameshifted;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344715.1;locus_tag=ACYKK2_001423;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 DBLQKW010000035.1 tpg gene 6575 7579 . + . ID=gene-ACYKK2_001424;Name=legI;gbkey=Gene;gene=legI;gene_biotype=protein_coding;locus_tag=ACYKK2_001424 DBLQKW010000035.1 Protein Homology CDS 6575 7579 . + 0 ID=cds-HIH2232046.1;Parent=gene-ACYKK2_001424;Dbxref=NCBI_GP:HIH2232046.1;Name=HIH2232046.1;gbkey=CDS;gene=legI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344716.1;locus_tag=ACYKK2_001424;product=N%2CN'-diacetyllegionaminate synthase;protein_id=HIH2232046.1;transl_table=11 DBLQKW010000035.1 tpg gene 7572 8726 . + . ID=gene-ACYKK2_001425;Name=legG;gbkey=Gene;gene=legG;gene_biotype=protein_coding;locus_tag=ACYKK2_001425 DBLQKW010000035.1 Protein Homology CDS 7572 8726 . + 0 ID=cds-HIH2232047.1;Parent=gene-ACYKK2_001425;Dbxref=NCBI_GP:HIH2232047.1;Name=HIH2232047.1;gbkey=CDS;gene=legG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344717.1;locus_tag=ACYKK2_001425;product=GDP-N%2CN'-diacetylbacillosamine 2-epimerase (hydrolyzing);protein_id=HIH2232047.1;transl_table=11 DBLQKW010000035.1 tpg gene 8735 9760 . + . ID=gene-ACYKK2_001426;Name=ACYKK2_001426;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001426 DBLQKW010000035.1 Protein Homology CDS 8735 9760 . + 0 ID=cds-HIH2232048.1;Parent=gene-ACYKK2_001426;Dbxref=NCBI_GP:HIH2232048.1;Name=HIH2232048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344718.1;locus_tag=ACYKK2_001426;product=nucleotidyltransferase family protein;protein_id=HIH2232048.1;transl_table=11 DBLQKW010000035.1 tpg gene 9757 10662 . + . ID=gene-ACYKK2_001427;Name=ptmF;gbkey=Gene;gene=ptmF;gene_biotype=protein_coding;locus_tag=ACYKK2_001427 DBLQKW010000035.1 Protein Homology CDS 9757 10662 . + 0 ID=cds-HIH2232049.1;Parent=gene-ACYKK2_001427;Dbxref=NCBI_GP:HIH2232049.1;Name=HIH2232049.1;gbkey=CDS;gene=ptmF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344719.1;locus_tag=ACYKK2_001427;product=L-glutamine-D-fructose-6-phosphate isomerase subunit;protein_id=HIH2232049.1;transl_table=11 DBLQKW010000035.1 tpg gene 10655 11362 . + . ID=gene-ACYKK2_001428;Name=legF;gbkey=Gene;gene=legF;gene_biotype=protein_coding;gene_synonym=ptmB;locus_tag=ACYKK2_001428 DBLQKW010000035.1 Protein Homology CDS 10655 11362 . + 0 ID=cds-HIH2232050.1;Parent=gene-ACYKK2_001428;Dbxref=NCBI_GP:HIH2232050.1;Name=HIH2232050.1;gbkey=CDS;gene=legF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344720.1;locus_tag=ACYKK2_001428;product=CMP-N%2CN'-diacetyllegionaminic acid synthase;protein_id=HIH2232050.1;transl_table=11 DBLQKW010000035.1 tpg gene 11362 12132 . + . ID=gene-ACYKK2_001429;Name=ptmA;gbkey=Gene;gene=ptmA;gene_biotype=protein_coding;locus_tag=ACYKK2_001429 DBLQKW010000035.1 Protein Homology CDS 11362 12132 . + 0 ID=cds-HIH2232051.1;Parent=gene-ACYKK2_001429;Dbxref=NCBI_GP:HIH2232051.1;Name=HIH2232051.1;Ontology_term=GO:0016616;gbkey=CDS;gene=ptmA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344721.1;locus_tag=ACYKK2_001429;product=flagellin modification protein PtmA;protein_id=HIH2232051.1;transl_table=11 DBLQKW010000035.1 tpg gene 12120 14005 . + . ID=gene-ACYKK2_001430;Name=ACYKK2_001430;end_range=14005,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001430;partial=true DBLQKW010000035.1 Protein Homology CDS 12120 14005 . + 0 ID=cds-HIH2232052.1;Parent=gene-ACYKK2_001430;Dbxref=NCBI_GP:HIH2232052.1;Name=HIH2232052.1;end_range=14005,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344708.1;locus_tag=ACYKK2_001430;partial=true;product=motility associated factor glycosyltransferase family protein;protein_id=HIH2232052.1;transl_table=11 ##sequence-region DBLQKW010000036.1 1 13665 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000036.1 tpg region 1 13665 . + . ID=DBLQKW010000036.1:1..13665;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000036.1 tpg gene 41 1291 . + . ID=gene-ACYKK2_001431;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=ACYKK2_001431 DBLQKW010000036.1 Protein Homology CDS 41 1291 . + 0 ID=cds-HIH2232053.1;Parent=gene-ACYKK2_001431;Dbxref=NCBI_GP:HIH2232053.1;Name=HIH2232053.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344994.1;locus_tag=ACYKK2_001431;product=amino acid transporter;protein_id=HIH2232053.1;transl_table=11 DBLQKW010000036.1 tpg gene 1306 2670 . + . ID=gene-ACYKK2_001432;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=ACYKK2_001432 DBLQKW010000036.1 Protein Homology CDS 1306 2670 . + 0 ID=cds-HIH2232054.1;Parent=gene-ACYKK2_001432;Dbxref=NCBI_GP:HIH2232054.1;Name=HIH2232054.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;gene=sdaA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344993.1;locus_tag=ACYKK2_001432;product=L-serine ammonia-lyase;protein_id=HIH2232054.1;transl_table=11 DBLQKW010000036.1 tpg gene 2678 3199 . - . ID=gene-ACYKK2_001433;Name=ACYKK2_001433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001433 DBLQKW010000036.1 Protein Homology CDS 2678 3199 . - 0 ID=cds-HIH2232055.1;Parent=gene-ACYKK2_001433;Dbxref=NCBI_GP:HIH2232055.1;Name=HIH2232055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344992.1;locus_tag=ACYKK2_001433;product=hypothetical protein;protein_id=HIH2232055.1;transl_table=11 DBLQKW010000036.1 tpg gene 3180 4190 . - . ID=gene-ACYKK2_001434;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=ACYKK2_001434 DBLQKW010000036.1 Protein Homology CDS 3180 4190 . - 0 ID=cds-HIH2232056.1;Parent=gene-ACYKK2_001434;Dbxref=NCBI_GP:HIH2232056.1;Name=HIH2232056.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344991.1;locus_tag=ACYKK2_001434;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=HIH2232056.1;transl_table=11 DBLQKW010000036.1 tpg gene 4396 4483 . - . ID=gene-ACYKK2_001435;Name=ACYKK2_001435;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_001435 DBLQKW010000036.1 tRNAscan-SE tRNA 4396 4483 . - . ID=rna-ACYKK2_001435;Parent=gene-ACYKK2_001435;anticodon=(pos:complement(4447..4449));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001435;product=tRNA-Ser DBLQKW010000036.1 tRNAscan-SE exon 4396 4483 . - . ID=exon-ACYKK2_001435-1;Parent=rna-ACYKK2_001435;anticodon=(pos:complement(4447..4449));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001435;product=tRNA-Ser DBLQKW010000036.1 tpg gene 4505 4578 . - . ID=gene-ACYKK2_001436;Name=ACYKK2_001436;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_001436 DBLQKW010000036.1 tRNAscan-SE tRNA 4505 4578 . - . ID=rna-ACYKK2_001436;Parent=gene-ACYKK2_001436;anticodon=(pos:complement(4544..4546));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001436;product=tRNA-Cys DBLQKW010000036.1 tRNAscan-SE exon 4505 4578 . - . ID=exon-ACYKK2_001436-1;Parent=rna-ACYKK2_001436;anticodon=(pos:complement(4544..4546));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001436;product=tRNA-Cys DBLQKW010000036.1 tpg gene 4597 4685 . - . ID=gene-ACYKK2_001437;Name=ACYKK2_001437;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_001437 DBLQKW010000036.1 tRNAscan-SE tRNA 4597 4685 . - . ID=rna-ACYKK2_001437;Parent=gene-ACYKK2_001437;anticodon=(pos:complement(4649..4651));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001437;product=tRNA-Leu DBLQKW010000036.1 tRNAscan-SE exon 4597 4685 . - . ID=exon-ACYKK2_001437-1;Parent=rna-ACYKK2_001437;anticodon=(pos:complement(4649..4651));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001437;product=tRNA-Leu DBLQKW010000036.1 tpg gene 4695 4769 . - . ID=gene-ACYKK2_001438;Name=ACYKK2_001438;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_001438 DBLQKW010000036.1 tRNAscan-SE tRNA 4695 4769 . - . ID=rna-ACYKK2_001438;Parent=gene-ACYKK2_001438;anticodon=(pos:complement(4735..4737));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001438;product=tRNA-Gly DBLQKW010000036.1 tRNAscan-SE exon 4695 4769 . - . ID=exon-ACYKK2_001438-1;Parent=rna-ACYKK2_001438;anticodon=(pos:complement(4735..4737));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001438;product=tRNA-Gly DBLQKW010000036.1 tpg gene 4841 5593 . - . ID=gene-ACYKK2_001439;Name=ACYKK2_001439;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001439 DBLQKW010000036.1 Protein Homology CDS 4841 5593 . - 0 ID=cds-HIH2232057.1;Parent=gene-ACYKK2_001439;Dbxref=NCBI_GP:HIH2232057.1;Name=HIH2232057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344990.1;locus_tag=ACYKK2_001439;product=hypothetical protein;protein_id=HIH2232057.1;transl_table=11 DBLQKW010000036.1 tpg gene 5666 6685 . + . ID=gene-ACYKK2_001440;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=ACYKK2_001440 DBLQKW010000036.1 Protein Homology CDS 5666 6685 . + 0 ID=cds-HIH2232058.1;Parent=gene-ACYKK2_001440;Dbxref=NCBI_GP:HIH2232058.1;Name=HIH2232058.1;Ontology_term=GO:0006284,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344989.1;locus_tag=ACYKK2_001440;product=A/G-specific adenine glycosylase;protein_id=HIH2232058.1;transl_table=11 DBLQKW010000036.1 tpg pseudogene 6671 7929 . - . ID=gene-ACYKK2_001441;Name=kgtP;gbkey=Gene;gene=kgtP;gene_biotype=pseudogene;locus_tag=ACYKK2_001441;pseudo=true DBLQKW010000036.1 Protein Homology CDS 6671 7929 . - 0 ID=cds-ACYKK2_001441;Parent=gene-ACYKK2_001441;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=kgtP;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344988.1;locus_tag=ACYKK2_001441;product=MFS transporter;pseudo=true;transl_table=11 DBLQKW010000036.1 tpg gene 8096 8953 . + . ID=gene-ACYKK2_001442;Name=ACYKK2_001442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001442 DBLQKW010000036.1 Protein Homology CDS 8096 8953 . + 0 ID=cds-HIH2232059.1;Parent=gene-ACYKK2_001442;Dbxref=NCBI_GP:HIH2232059.1;Name=HIH2232059.1;Ontology_term=GO:0003824,GO:0051539,GO:1904047;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937912.1;locus_tag=ACYKK2_001442;product=radical SAM/SPASM domain-containing protein;protein_id=HIH2232059.1;transl_table=11 DBLQKW010000036.1 tpg gene 8950 9756 . - . ID=gene-ACYKK2_001443;Name=chuD;gbkey=Gene;gene=chuD;gene_biotype=protein_coding;locus_tag=ACYKK2_001443 DBLQKW010000036.1 Protein Homology CDS 8950 9756 . - 0 ID=cds-HIH2232060.1;Parent=gene-ACYKK2_001443;Dbxref=NCBI_GP:HIH2232060.1;Name=HIH2232060.1;gbkey=CDS;gene=chuD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344986.1;locus_tag=ACYKK2_001443;product=ABC transporter substrate-binding protein;protein_id=HIH2232060.1;transl_table=11 DBLQKW010000036.1 tpg gene 9753 10529 . - . ID=gene-ACYKK2_001444;Name=chuC;gbkey=Gene;gene=chuC;gene_biotype=protein_coding;locus_tag=ACYKK2_001444 DBLQKW010000036.1 Protein Homology CDS 9753 10529 . - 0 ID=cds-HIH2232061.1;Parent=gene-ACYKK2_001444;Dbxref=NCBI_GP:HIH2232061.1;Name=HIH2232061.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=chuC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344985.1;locus_tag=ACYKK2_001444;product=ABC transporter ATP-binding protein;protein_id=HIH2232061.1;transl_table=11 DBLQKW010000036.1 tpg gene 10529 11515 . - . ID=gene-ACYKK2_001445;Name=chuB;gbkey=Gene;gene=chuB;gene_biotype=protein_coding;locus_tag=ACYKK2_001445 DBLQKW010000036.1 Protein Homology CDS 10529 11515 . - 0 ID=cds-HIH2232062.1;Parent=gene-ACYKK2_001445;Dbxref=NCBI_GP:HIH2232062.1;Name=HIH2232062.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;gene=chuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344984.1;locus_tag=ACYKK2_001445;product=FecCD family ABC transporter permease;protein_id=HIH2232062.1;transl_table=11 DBLQKW010000036.1 tpg gene 11490 13646 . - . ID=gene-ACYKK2_001446;Name=chuA;gbkey=Gene;gene=chuA;gene_biotype=protein_coding;locus_tag=ACYKK2_001446 DBLQKW010000036.1 Protein Homology CDS 11490 13646 . - 0 ID=cds-HIH2232063.1;Parent=gene-ACYKK2_001446;Dbxref=NCBI_GP:HIH2232063.1;Name=HIH2232063.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;gene=chuA;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344983.1;locus_tag=ACYKK2_001446;product=TonB-dependent receptor;protein_id=HIH2232063.1;transl_table=11 ##sequence-region DBLQKW010000037.1 1 13361 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000037.1 tpg region 1 13361 . + . ID=DBLQKW010000037.1:1..13361;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000037.1 tpg gene 81 1505 . + . ID=gene-ACYKK2_001447;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=ACYKK2_001447 DBLQKW010000037.1 Protein Homology CDS 81 1505 . + 0 ID=cds-HIH2232064.1;Parent=gene-ACYKK2_001447;Dbxref=NCBI_GP:HIH2232064.1;Name=HIH2232064.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344094.1;locus_tag=ACYKK2_001447;product=anaerobic C4-dicarboxylate transporter;protein_id=HIH2232064.1;transl_table=11 DBLQKW010000037.1 tpg pseudogene 1647 1834 . + . ID=gene-ACYKK2_001448;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=pseudogene;locus_tag=ACYKK2_001448;pseudo=true DBLQKW010000037.1 Protein Homology CDS 1647 1834 . + 0 ID=cds-ACYKK2_001448;Parent=gene-ACYKK2_001448;Note=frameshifted;Ontology_term=GO:0006813,GO:0043462,GO:0031004;gbkey=CDS;gene=kdpF;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_process=potassium ion transport|0006813||IEA,regulation of ATP-dependent activity|0043462||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344095.1;locus_tag=ACYKK2_001448;product=K(+)-transporting ATPase subunit F;pseudo=true;transl_table=11 DBLQKW010000037.1 tpg pseudogene 2139 2549 . + . ID=gene-ACYKK2_001449;Name=ACYKK2_001449;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001449;pseudo=true DBLQKW010000037.1 Protein Homology CDS 2139 2549 . + 0 ID=cds-ACYKK2_001449;Parent=gene-ACYKK2_001449;Note=internal stop;Ontology_term=GO:0006813,GO:0008556;gbkey=CDS;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: protein motif:HMM:NF015753.6;locus_tag=ACYKK2_001449;product=potassium-transporting ATPase subunit KdpA;pseudo=true;transl_table=11 DBLQKW010000037.1 tpg gene 2521 2754 . + . ID=gene-ACYKK2_001450;Name=ACYKK2_001450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001450 DBLQKW010000037.1 Protein Homology CDS 2521 2754 . + 0 ID=cds-HIH2232065.1;Parent=gene-ACYKK2_001450;Dbxref=NCBI_GP:HIH2232065.1;Name=HIH2232065.1;Ontology_term=GO:0006813,GO:0008556;gbkey=CDS;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: protein motif:HMM:NF015753.6;locus_tag=ACYKK2_001450;product=potassium-transporting ATPase subunit KdpA;protein_id=HIH2232065.1;transl_table=11 DBLQKW010000037.1 tpg pseudogene 2721 3538 . + . ID=gene-ACYKK2_001451;Name=ACYKK2_001451;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001451;pseudo=true DBLQKW010000037.1 Protein Homology CDS 2721 3538 . + 0 ID=cds-ACYKK2_001451;Parent=gene-ACYKK2_001451;Note=frameshifted;Ontology_term=GO:0006813,GO:0008556;gbkey=CDS;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: protein motif:HMM:NF015753.6;locus_tag=ACYKK2_001451;product=potassium-transporting ATPase subunit KdpA;pseudo=true;transl_table=11 DBLQKW010000037.1 tpg pseudogene 3548 5425 . + . ID=gene-ACYKK2_001452;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=pseudogene;locus_tag=ACYKK2_001452;pseudo=true DBLQKW010000037.1 Protein Homology CDS 3548 5425 . + 0 ID=cds-ACYKK2_001452;Parent=gene-ACYKK2_001452;Note=frameshifted;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344096.1;locus_tag=ACYKK2_001452;product=potassium-transporting ATPase subunit KdpB;pseudo=true;transl_table=11 DBLQKW010000037.1 tpg gene 5427 6035 . + . ID=gene-ACYKK2_001453;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=ACYKK2_001453 DBLQKW010000037.1 Protein Homology CDS 5427 6035 . + 0 ID=cds-HIH2232066.1;Parent=gene-ACYKK2_001453;Dbxref=NCBI_GP:HIH2232066.1;Name=HIH2232066.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002861367.1;locus_tag=ACYKK2_001453;product=potassium-transporting ATPase subunit KdpC;protein_id=HIH2232066.1;transl_table=11 DBLQKW010000037.1 tpg pseudogene 6167 7070 . + . ID=gene-ACYKK2_001454;Name=ACYKK2_001454;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001454;pseudo=true DBLQKW010000037.1 Protein Homology CDS 6167 7070 . + 0 ID=cds-ACYKK2_001454;Parent=gene-ACYKK2_001454;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014728.6;locus_tag=ACYKK2_001454;product=sensor histidine kinase KdpD;pseudo=true;transl_table=11 DBLQKW010000037.1 tpg gene 7210 7398 . + . ID=gene-ACYKK2_001455;Name=ACYKK2_001455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001455 DBLQKW010000037.1 Protein Homology CDS 7210 7398 . + 0 ID=cds-HIH2232067.1;Parent=gene-ACYKK2_001455;Dbxref=NCBI_GP:HIH2232067.1;Name=HIH2232067.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024884.6;locus_tag=ACYKK2_001455;product=DUF4118 domain-containing protein;protein_id=HIH2232067.1;transl_table=11 DBLQKW010000037.1 tpg gene 7427 7558 . + . ID=gene-ACYKK2_001456;Name=ACYKK2_001456;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001456 DBLQKW010000037.1 Protein Homology CDS 7427 7558 . + 0 ID=cds-HIH2232068.1;Parent=gene-ACYKK2_001456;Dbxref=NCBI_GP:HIH2232068.1;Name=HIH2232068.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024884.6;locus_tag=ACYKK2_001456;product=hypothetical protein;protein_id=HIH2232068.1;transl_table=11 DBLQKW010000037.1 tpg gene 7534 7854 . + . ID=gene-ACYKK2_001457;Name=ACYKK2_001457;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001457 DBLQKW010000037.1 GeneMarkS-2+ CDS 7534 7854 . + 0 ID=cds-HIH2232069.1;Parent=gene-ACYKK2_001457;Dbxref=NCBI_GP:HIH2232069.1;Name=HIH2232069.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001457;product=hypothetical protein;protein_id=HIH2232069.1;transl_table=11 DBLQKW010000037.1 tpg gene 7956 9929 . - . ID=gene-ACYKK2_001458;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=ACYKK2_001458 DBLQKW010000037.1 Protein Homology CDS 7956 9929 . - 0 ID=cds-HIH2232070.1;Parent=gene-ACYKK2_001458;Dbxref=NCBI_GP:HIH2232070.1;Name=HIH2232070.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344098.1;locus_tag=ACYKK2_001458;product=excinuclease ABC subunit UvrB;protein_id=HIH2232070.1;transl_table=11 DBLQKW010000037.1 tpg gene 10083 10313 . + . ID=gene-ACYKK2_001459;Name=ACYKK2_001459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001459 DBLQKW010000037.1 Protein Homology CDS 10083 10313 . + 0 ID=cds-HIH2232071.1;Parent=gene-ACYKK2_001459;Dbxref=NCBI_GP:HIH2232071.1;Name=HIH2232071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344099.1;locus_tag=ACYKK2_001459;product=hypothetical protein;protein_id=HIH2232071.1;transl_table=11 DBLQKW010000037.1 tpg gene 10303 10545 . + . ID=gene-ACYKK2_001460;Name=ACYKK2_001460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001460 DBLQKW010000037.1 Protein Homology CDS 10303 10545 . + 0 ID=cds-HIH2232072.1;Parent=gene-ACYKK2_001460;Dbxref=NCBI_GP:HIH2232072.1;Name=HIH2232072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344100.1;locus_tag=ACYKK2_001460;product=hypothetical protein;protein_id=HIH2232072.1;transl_table=11 DBLQKW010000037.1 tpg gene 10542 10979 . + . ID=gene-ACYKK2_001461;Name=ACYKK2_001461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001461 DBLQKW010000037.1 Protein Homology CDS 10542 10979 . + 0 ID=cds-HIH2232073.1;Parent=gene-ACYKK2_001461;Dbxref=NCBI_GP:HIH2232073.1;Name=HIH2232073.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02532.1;locus_tag=ACYKK2_001461;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=HIH2232073.1;transl_table=11 DBLQKW010000037.1 tpg gene 10961 12814 . + . ID=gene-ACYKK2_001462;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=ACYKK2_001462 DBLQKW010000037.1 Protein Homology CDS 10961 12814 . + 0 ID=cds-HIH2232074.1;Parent=gene-ACYKK2_001462;Dbxref=NCBI_GP:HIH2232074.1;Name=HIH2232074.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=priA;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344102.1;locus_tag=ACYKK2_001462;product=primosomal protein N';protein_id=HIH2232074.1;transl_table=11 DBLQKW010000037.1 tpg gene 12824 13361 . - . ID=gene-ACYKK2_001463;Name=ACYKK2_001463;end_range=13361,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001463;partial=true DBLQKW010000037.1 Protein Homology CDS 12824 13361 . - 1 ID=cds-HIH2232075.1;Parent=gene-ACYKK2_001463;Dbxref=NCBI_GP:HIH2232075.1;Name=HIH2232075.1;end_range=13361,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019109180.1;locus_tag=ACYKK2_001463;partial=true;product=DUF2972 domain-containing protein;protein_id=HIH2232075.1;transl_table=11 ##sequence-region DBLQKW010000038.1 1 12739 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000038.1 tpg region 1 12739 . + . ID=DBLQKW010000038.1:1..12739;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000038.1 tpg gene 126 911 . + . ID=gene-ACYKK2_001464;Name=ACYKK2_001464;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001464 DBLQKW010000038.1 Protein Homology CDS 126 911 . + 0 ID=cds-HIH2232076.1;Parent=gene-ACYKK2_001464;Dbxref=NCBI_GP:HIH2232076.1;Name=HIH2232076.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343781.1;locus_tag=ACYKK2_001464;product=sulfite exporter TauE/SafE family protein;protein_id=HIH2232076.1;transl_table=11 DBLQKW010000038.1 tpg gene 984 3809 . + . ID=gene-ACYKK2_001465;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=ACYKK2_001465 DBLQKW010000038.1 Protein Homology CDS 984 3809 . + 0 ID=cds-HIH2232077.1;Parent=gene-ACYKK2_001465;Dbxref=NCBI_GP:HIH2232077.1;Name=HIH2232077.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343780.1;locus_tag=ACYKK2_001465;product=excinuclease ABC subunit UvrA;protein_id=HIH2232077.1;transl_table=11 DBLQKW010000038.1 tpg gene 3814 4257 . + . ID=gene-ACYKK2_001466;Name=ACYKK2_001466;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001466 DBLQKW010000038.1 Protein Homology CDS 3814 4257 . + 0 ID=cds-HIH2232078.1;Parent=gene-ACYKK2_001466;Dbxref=NCBI_GP:HIH2232078.1;Name=HIH2232078.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343779.1;locus_tag=ACYKK2_001466;product=YqaA family protein;protein_id=HIH2232078.1;transl_table=11 DBLQKW010000038.1 tpg gene 4213 5220 . - . ID=gene-ACYKK2_001467;Name=ACYKK2_001467;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001467 DBLQKW010000038.1 Protein Homology CDS 4213 5220 . - 0 ID=cds-HIH2232079.1;Parent=gene-ACYKK2_001467;Dbxref=NCBI_GP:HIH2232079.1;Name=HIH2232079.1;Ontology_term=GO:0016799;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343778.1;locus_tag=ACYKK2_001467;product=nucleoside hydrolase;protein_id=HIH2232079.1;transl_table=11 DBLQKW010000038.1 tpg pseudogene 5217 6564 . - . ID=gene-ACYKK2_001468;Name=ACYKK2_001468;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001468;pseudo=true DBLQKW010000038.1 Protein Homology CDS 5217 6564 . - 0 ID=cds-ACYKK2_001468;Parent=gene-ACYKK2_001468;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343777.1;locus_tag=ACYKK2_001468;product=MFS transporter;pseudo=true;transl_table=11 DBLQKW010000038.1 tpg gene 6728 9367 . + . ID=gene-ACYKK2_001469;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=ACYKK2_001469 DBLQKW010000038.1 Protein Homology CDS 6728 9367 . + 0 ID=cds-HIH2232080.1;Parent=gene-ACYKK2_001469;Dbxref=NCBI_GP:HIH2232080.1;Name=HIH2232080.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343776.1;locus_tag=ACYKK2_001469;product=DNA polymerase I;protein_id=HIH2232080.1;transl_table=11 DBLQKW010000038.1 tpg gene 9384 10160 . + . ID=gene-ACYKK2_001470;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=ACYKK2_001470 DBLQKW010000038.1 Protein Homology CDS 9384 10160 . + 0 ID=cds-HIH2232081.1;Parent=gene-ACYKK2_001470;Dbxref=NCBI_GP:HIH2232081.1;Name=HIH2232081.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343775.1;locus_tag=ACYKK2_001470;product=flagellar motor stator protein MotA;protein_id=HIH2232081.1;transl_table=11 DBLQKW010000038.1 tpg gene 10163 10906 . + . ID=gene-ACYKK2_001471;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=ACYKK2_001471 DBLQKW010000038.1 Protein Homology CDS 10163 10906 . + 0 ID=cds-HIH2232082.1;Parent=gene-ACYKK2_001471;Dbxref=NCBI_GP:HIH2232082.1;Name=HIH2232082.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343774.1;locus_tag=ACYKK2_001471;product=flagellar motor protein MotB;protein_id=HIH2232082.1;transl_table=11 DBLQKW010000038.1 tpg gene 10912 12000 . - . ID=gene-ACYKK2_001472;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=ACYKK2_001472 DBLQKW010000038.1 Protein Homology CDS 10912 12000 . - 0 ID=cds-HIH2232083.1;Parent=gene-ACYKK2_001472;Dbxref=NCBI_GP:HIH2232083.1;Name=HIH2232083.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343773.1;locus_tag=ACYKK2_001472;product=flagellar biosynthesis protein FlhB;protein_id=HIH2232083.1;transl_table=11 DBLQKW010000038.1 tpg gene 12119 12715 . - . ID=gene-ACYKK2_001473;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=ACYKK2_001473 DBLQKW010000038.1 Protein Homology CDS 12119 12715 . - 0 ID=cds-HIH2232084.1;Parent=gene-ACYKK2_001473;Dbxref=NCBI_GP:HIH2232084.1;Name=HIH2232084.1;gbkey=CDS;gene=ahpC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343772.1;locus_tag=ACYKK2_001473;product=peroxiredoxin;protein_id=HIH2232084.1;transl_table=11 ##sequence-region DBLQKW010000039.1 1 12044 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000039.1 tpg region 1 12044 . + . ID=DBLQKW010000039.1:1..12044;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000039.1 tpg gene 1 1445 . - . ID=gene-ACYKK2_001474;Name=ACYKK2_001474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001474;partial=true;start_range=.,1 DBLQKW010000039.1 Protein Homology CDS 1 1445 . - 0 ID=cds-HIH2232085.1;Parent=gene-ACYKK2_001474;Dbxref=NCBI_GP:HIH2232085.1;Name=HIH2232085.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039427.5;locus_tag=ACYKK2_001474;partial=true;product=DUF6402 family protein;protein_id=HIH2232085.1;start_range=.,1;transl_table=11 DBLQKW010000039.1 tpg gene 1587 1904 . - . ID=gene-ACYKK2_001475;Name=ACYKK2_001475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001475 DBLQKW010000039.1 Protein Homology CDS 1587 1904 . - 0 ID=cds-HIH2232086.1;Parent=gene-ACYKK2_001475;Dbxref=NCBI_GP:HIH2232086.1;Name=HIH2232086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016818319.1;locus_tag=ACYKK2_001475;product=hypothetical protein;protein_id=HIH2232086.1;transl_table=11 DBLQKW010000039.1 tpg gene 1912 3435 . - . ID=gene-ACYKK2_001476;Name=ACYKK2_001476;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001476 DBLQKW010000039.1 Protein Homology CDS 1912 3435 . - 0 ID=cds-HIH2232087.1;Parent=gene-ACYKK2_001476;Dbxref=NCBI_GP:HIH2232087.1;Name=HIH2232087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935935.1;locus_tag=ACYKK2_001476;product=hypothetical protein;protein_id=HIH2232087.1;transl_table=11 DBLQKW010000039.1 tpg gene 3692 4084 . - . ID=gene-ACYKK2_001477;Name=ACYKK2_001477;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001477 DBLQKW010000039.1 Protein Homology CDS 3692 4084 . - 0 ID=cds-HIH2232088.1;Parent=gene-ACYKK2_001477;Dbxref=NCBI_GP:HIH2232088.1;Name=HIH2232088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935934.1;locus_tag=ACYKK2_001477;product=hypothetical protein;protein_id=HIH2232088.1;transl_table=11 DBLQKW010000039.1 tpg gene 4081 4617 . - . ID=gene-ACYKK2_001478;Name=ACYKK2_001478;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001478 DBLQKW010000039.1 Protein Homology CDS 4081 4617 . - 0 ID=cds-HIH2232089.1;Parent=gene-ACYKK2_001478;Dbxref=NCBI_GP:HIH2232089.1;Name=HIH2232089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910003.1;locus_tag=ACYKK2_001478;product=hypothetical protein;protein_id=HIH2232089.1;transl_table=11 DBLQKW010000039.1 tpg gene 4618 4743 . - . ID=gene-ACYKK2_001479;Name=ACYKK2_001479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001479 DBLQKW010000039.1 GeneMarkS-2+ CDS 4618 4743 . - 0 ID=cds-HIH2232090.1;Parent=gene-ACYKK2_001479;Dbxref=NCBI_GP:HIH2232090.1;Name=HIH2232090.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001479;product=hypothetical protein;protein_id=HIH2232090.1;transl_table=11 DBLQKW010000039.1 tpg gene 4931 5323 . - . ID=gene-ACYKK2_001480;Name=ACYKK2_001480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001480 DBLQKW010000039.1 Protein Homology CDS 4931 5323 . - 0 ID=cds-HIH2232091.1;Parent=gene-ACYKK2_001480;Dbxref=NCBI_GP:HIH2232091.1;Name=HIH2232091.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: protein motif:HMM:NF013890.6;locus_tag=ACYKK2_001480;product=lipase family protein;protein_id=HIH2232091.1;transl_table=11 DBLQKW010000039.1 tpg gene 5286 5609 . - . ID=gene-ACYKK2_001481;Name=ACYKK2_001481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001481 DBLQKW010000039.1 Protein Homology CDS 5286 5609 . - 0 ID=cds-HIH2232092.1;Parent=gene-ACYKK2_001481;Dbxref=NCBI_GP:HIH2232092.1;Name=HIH2232092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005219890.1;locus_tag=ACYKK2_001481;product=hypothetical protein;protein_id=HIH2232092.1;transl_table=11 DBLQKW010000039.1 tpg gene 6104 6688 . + . ID=gene-ACYKK2_001482;Name=ACYKK2_001482;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001482 DBLQKW010000039.1 Protein Homology CDS 6104 6688 . + 0 ID=cds-HIH2232093.1;Parent=gene-ACYKK2_001482;Dbxref=NCBI_GP:HIH2232093.1;Name=HIH2232093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016818317.1;locus_tag=ACYKK2_001482;product=lysozyme;protein_id=HIH2232093.1;transl_table=11 DBLQKW010000039.1 tpg gene 6717 7076 . + . ID=gene-ACYKK2_001483;Name=ACYKK2_001483;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001483 DBLQKW010000039.1 Protein Homology CDS 6717 7076 . + 0 ID=cds-HIH2232094.1;Parent=gene-ACYKK2_001483;Dbxref=NCBI_GP:HIH2232094.1;Name=HIH2232094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002779560.1;locus_tag=ACYKK2_001483;product=hypothetical protein;protein_id=HIH2232094.1;transl_table=11 DBLQKW010000039.1 tpg gene 7345 11277 . + . ID=gene-ACYKK2_001484;Name=ACYKK2_001484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001484 DBLQKW010000039.1 Protein Homology CDS 7345 11277 . + 0 ID=cds-HIH2232095.1;Parent=gene-ACYKK2_001484;Dbxref=NCBI_GP:HIH2232095.1;Name=HIH2232095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002779561.1;locus_tag=ACYKK2_001484;product=hypothetical protein;protein_id=HIH2232095.1;transl_table=11 DBLQKW010000039.1 tpg gene 11296 12044 . + . ID=gene-ACYKK2_001485;Name=ACYKK2_001485;end_range=12044,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001485;partial=true DBLQKW010000039.1 Protein Homology CDS 11296 12044 . + 0 ID=cds-HIH2232096.1;Parent=gene-ACYKK2_001485;Dbxref=NCBI_GP:HIH2232096.1;Name=HIH2232096.1;end_range=12044,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002867143.1;locus_tag=ACYKK2_001485;partial=true;product=hypothetical protein;protein_id=HIH2232096.1;transl_table=11 ##sequence-region DBLQKW010000040.1 1 11909 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000040.1 tpg region 1 11909 . + . ID=DBLQKW010000040.1:1..11909;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000040.1 tpg gene 1 1472 . - . ID=gene-ACYKK2_001486;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=ACYKK2_001486;partial=true;start_range=.,1 DBLQKW010000040.1 Protein Homology CDS 1 1472 . - 0 ID=cds-HIH2232097.1;Parent=gene-ACYKK2_001486;Dbxref=NCBI_GP:HIH2232097.1;Name=HIH2232097.1;Ontology_term=GO:0008033,GO:0004808,GO:0016645;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity%2C acting on the CH-NH group of donors|0016645||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344659.1;locus_tag=ACYKK2_001486;partial=true;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=HIH2232097.1;start_range=.,1;transl_table=11 DBLQKW010000040.1 tpg gene 1469 3448 . - . ID=gene-ACYKK2_001487;Name=ACYKK2_001487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001487 DBLQKW010000040.1 Protein Homology CDS 1469 3448 . - 0 ID=cds-HIH2232098.1;Parent=gene-ACYKK2_001487;Dbxref=NCBI_GP:HIH2232098.1;Name=HIH2232098.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344660.1;locus_tag=ACYKK2_001487;product=N-acetylmuramoyl-L-alanine amidase;protein_id=HIH2232098.1;transl_table=11 DBLQKW010000040.1 tpg gene 3448 4539 . - . ID=gene-ACYKK2_001488;Name=ACYKK2_001488;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001488 DBLQKW010000040.1 Protein Homology CDS 3448 4539 . - 0 ID=cds-HIH2232099.1;Parent=gene-ACYKK2_001488;Dbxref=NCBI_GP:HIH2232099.1;Name=HIH2232099.1;Ontology_term=GO:0018580;gbkey=CDS;go_function=nitronate monooxygenase activity|0018580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344661.1;locus_tag=ACYKK2_001488;product=nitronate monooxygenase;protein_id=HIH2232099.1;transl_table=11 DBLQKW010000040.1 tpg gene 4536 5741 . - . ID=gene-ACYKK2_001489;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=ACYKK2_001489 DBLQKW010000040.1 Protein Homology CDS 4536 5741 . - 0 ID=cds-HIH2232100.1;Parent=gene-ACYKK2_001489;Dbxref=NCBI_GP:HIH2232100.1;Name=HIH2232100.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344662.1;locus_tag=ACYKK2_001489;product=tyrosine--tRNA ligase;protein_id=HIH2232100.1;transl_table=11 DBLQKW010000040.1 tpg gene 5753 7948 . - . ID=gene-ACYKK2_001490;Name=ACYKK2_001490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001490 DBLQKW010000040.1 Protein Homology CDS 5753 7948 . - 0 ID=cds-HIH2232101.1;Parent=gene-ACYKK2_001490;Dbxref=NCBI_GP:HIH2232101.1;Name=HIH2232101.1;Ontology_term=GO:0015970,GO:0008728,GO:0008893;gbkey=CDS;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002867343.1;locus_tag=ACYKK2_001490;product=RelA/SpoT family protein;protein_id=HIH2232101.1;transl_table=11 DBLQKW010000040.1 tpg gene 7932 8156 . - . ID=gene-ACYKK2_001491;Name=ACYKK2_001491;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001491 DBLQKW010000040.1 Protein Homology CDS 7932 8156 . - 0 ID=cds-HIH2232102.1;Parent=gene-ACYKK2_001491;Dbxref=NCBI_GP:HIH2232102.1;Name=HIH2232102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344664.1;locus_tag=ACYKK2_001491;product=DNA-directed RNA polymerase subunit omega;protein_id=HIH2232102.1;transl_table=11 DBLQKW010000040.1 tpg gene 8167 8886 . - . ID=gene-ACYKK2_001492;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=ACYKK2_001492 DBLQKW010000040.1 Protein Homology CDS 8167 8886 . - 0 ID=cds-HIH2232103.1;Parent=gene-ACYKK2_001492;Dbxref=NCBI_GP:HIH2232103.1;Name=HIH2232103.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344665.1;locus_tag=ACYKK2_001492;product=UMP kinase;protein_id=HIH2232103.1;transl_table=11 DBLQKW010000040.1 tpg gene 8938 10131 . - . ID=gene-ACYKK2_001493;Name=ACYKK2_001493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001493 DBLQKW010000040.1 Protein Homology CDS 8938 10131 . - 0 ID=cds-HIH2232104.1;Parent=gene-ACYKK2_001493;Dbxref=NCBI_GP:HIH2232104.1;Name=HIH2232104.1;Ontology_term=GO:0006508,GO:0004222,GO:0016787,GO:0046872;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344666.1;locus_tag=ACYKK2_001493;product=murein hydrolase activator EnvC family protein;protein_id=HIH2232104.1;transl_table=11 DBLQKW010000040.1 tpg gene 10128 10934 . - . ID=gene-ACYKK2_001494;Name=ACYKK2_001494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001494 DBLQKW010000040.1 Protein Homology CDS 10128 10934 . - 0 ID=cds-HIH2232105.1;Parent=gene-ACYKK2_001494;Dbxref=NCBI_GP:HIH2232105.1;Name=HIH2232105.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344667.1;locus_tag=ACYKK2_001494;product=ABC transporter permease;protein_id=HIH2232105.1;transl_table=11 DBLQKW010000040.1 tpg gene 10921 11586 . - . ID=gene-ACYKK2_001495;Name=ACYKK2_001495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001495 DBLQKW010000040.1 Protein Homology CDS 10921 11586 . - 0 ID=cds-HIH2232106.1;Parent=gene-ACYKK2_001495;Dbxref=NCBI_GP:HIH2232106.1;Name=HIH2232106.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344668.1;locus_tag=ACYKK2_001495;product=cell division ATP-binding protein FtsE;protein_id=HIH2232106.1;transl_table=11 DBLQKW010000040.1 tpg gene 11656 11909 . - . ID=gene-ACYKK2_001496;Name=ACYKK2_001496;end_range=11909,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001496;partial=true DBLQKW010000040.1 Protein Homology CDS 11656 11909 . - 2 ID=cds-HIH2232107.1;Parent=gene-ACYKK2_001496;Dbxref=NCBI_GP:HIH2232107.1;Name=HIH2232107.1;end_range=11909,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344669.1;locus_tag=ACYKK2_001496;partial=true;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=HIH2232107.1;transl_table=11 ##sequence-region DBLQKW010000041.1 1 11382 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000041.1 tpg region 1 11382 . + . ID=DBLQKW010000041.1:1..11382;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000041.1 tpg gene 111 1118 . - . ID=gene-ACYKK2_001497;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=ACYKK2_001497 DBLQKW010000041.1 Protein Homology CDS 111 1118 . - 0 ID=cds-HIH2232108.1;Parent=gene-ACYKK2_001497;Dbxref=NCBI_GP:HIH2232108.1;Name=HIH2232108.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005219155.1;locus_tag=ACYKK2_001497;product=type II asparaginase;protein_id=HIH2232108.1;transl_table=11 DBLQKW010000041.1 tpg gene 1202 2773 . - . ID=gene-ACYKK2_001498;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=ACYKK2_001498 DBLQKW010000041.1 Protein Homology CDS 1202 2773 . - 0 ID=cds-HIH2232109.1;Parent=gene-ACYKK2_001498;Dbxref=NCBI_GP:HIH2232109.1;Name=HIH2232109.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343500.1;locus_tag=ACYKK2_001498;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=HIH2232109.1;transl_table=11 DBLQKW010000041.1 tpg gene 2760 4391 . - . ID=gene-ACYKK2_001499;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=ACYKK2_001499 DBLQKW010000041.1 Protein Homology CDS 2760 4391 . - 0 ID=cds-HIH2232110.1;Parent=gene-ACYKK2_001499;Dbxref=NCBI_GP:HIH2232110.1;Name=HIH2232110.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343499.1;locus_tag=ACYKK2_001499;product=CTP synthase;protein_id=HIH2232110.1;transl_table=11 DBLQKW010000041.1 tpg gene 4511 5134 . + . ID=gene-ACYKK2_001500;Name=thyX;gbkey=Gene;gene=thyX;gene_biotype=protein_coding;locus_tag=ACYKK2_001500 DBLQKW010000041.1 Protein Homology CDS 4511 5134 . + 0 ID=cds-HIH2232111.1;Parent=gene-ACYKK2_001500;Dbxref=NCBI_GP:HIH2232111.1;Name=HIH2232111.1;Ontology_term=GO:0006231,GO:0050660,GO:0050797;gbkey=CDS;gene=thyX;go_function=flavin adenine dinucleotide binding|0050660||IEA,thymidylate synthase (FAD) activity|0050797||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343498.1;locus_tag=ACYKK2_001500;product=FAD-dependent thymidylate synthase;protein_id=HIH2232111.1;transl_table=11 DBLQKW010000041.1 tpg gene 5254 6639 . + . ID=gene-ACYKK2_001501;Name=ACYKK2_001501;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001501 DBLQKW010000041.1 Protein Homology CDS 5254 6639 . + 0 ID=cds-HIH2232112.1;Parent=gene-ACYKK2_001501;Dbxref=NCBI_GP:HIH2232112.1;Name=HIH2232112.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343497.1;locus_tag=ACYKK2_001501;product=cation:dicarboxylate symporter family transporter;protein_id=HIH2232112.1;transl_table=11 DBLQKW010000041.1 tpg gene 6678 9047 . - . ID=gene-ACYKK2_001502;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=ACYKK2_001502 DBLQKW010000041.1 Protein Homology CDS 6678 9047 . - 0 ID=cds-HIH2232113.1;Parent=gene-ACYKK2_001502;Dbxref=NCBI_GP:HIH2232113.1;Name=HIH2232113.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343496.1;locus_tag=ACYKK2_001502;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=HIH2232113.1;transl_table=11 DBLQKW010000041.1 tpg gene 9063 10391 . - . ID=gene-ACYKK2_001503;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=ACYKK2_001503 DBLQKW010000041.1 Protein Homology CDS 9063 10391 . - 0 ID=cds-HIH2232114.1;Parent=gene-ACYKK2_001503;Dbxref=NCBI_GP:HIH2232114.1;Name=HIH2232114.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343495.1;locus_tag=ACYKK2_001503;product=adenylosuccinate lyase;protein_id=HIH2232114.1;transl_table=11 DBLQKW010000041.1 tpg gene 10469 11365 . + . ID=gene-ACYKK2_001504;Name=ACYKK2_001504;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001504 DBLQKW010000041.1 Protein Homology CDS 10469 11365 . + 0 ID=cds-HIH2232115.1;Parent=gene-ACYKK2_001504;Dbxref=NCBI_GP:HIH2232115.1;Name=HIH2232115.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002820948.1;locus_tag=ACYKK2_001504;product=RluA family pseudouridine synthase;protein_id=HIH2232115.1;transl_table=11 ##sequence-region DBLQKW010000042.1 1 11292 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000042.1 tpg region 1 11292 . + . ID=DBLQKW010000042.1:1..11292;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000042.1 tpg pseudogene 44 440 . + . ID=gene-ACYKK2_001505;Name=ACYKK2_001505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001505;pseudo=true DBLQKW010000042.1 Protein Homology CDS 44 440 . + 0 ID=cds-ACYKK2_001505;Parent=gene-ACYKK2_001505;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343486.1;locus_tag=ACYKK2_001505;product=DUF1440 domain-containing protein;pseudo=true;transl_table=11 DBLQKW010000042.1 tpg gene 452 2128 . - . ID=gene-ACYKK2_001506;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=ACYKK2_001506 DBLQKW010000042.1 Protein Homology CDS 452 2128 . - 0 ID=cds-HIH2232116.1;Parent=gene-ACYKK2_001506;Dbxref=NCBI_GP:HIH2232116.1;Name=HIH2232116.1;Ontology_term=GO:0009082,GO:0004160,GO:0051536;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343485.1;locus_tag=ACYKK2_001506;product=dihydroxy-acid dehydratase;protein_id=HIH2232116.1;transl_table=11 DBLQKW010000042.1 tpg gene 2288 2935 . + . ID=gene-ACYKK2_001507;Name=rrc;gbkey=Gene;gene=rrc;gene_biotype=protein_coding;locus_tag=ACYKK2_001507 DBLQKW010000042.1 Protein Homology CDS 2288 2935 . + 0 ID=cds-HIH2232117.1;Parent=gene-ACYKK2_001507;Dbxref=NCBI_GP:HIH2232117.1;Name=HIH2232117.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;gene=rrc;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343484.1;locus_tag=ACYKK2_001507;product=ferritin family protein;protein_id=HIH2232117.1;transl_table=11 DBLQKW010000042.1 tpg gene 3000 3239 . + . ID=gene-ACYKK2_001508;Name=ACYKK2_001508;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001508 DBLQKW010000042.1 Protein Homology CDS 3000 3239 . + 0 ID=cds-HIH2232118.1;Parent=gene-ACYKK2_001508;Dbxref=NCBI_GP:HIH2232118.1;Name=HIH2232118.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343483.1;locus_tag=ACYKK2_001508;product=ComEA family DNA-binding protein;protein_id=HIH2232118.1;transl_table=11 DBLQKW010000042.1 tpg gene 3272 3847 . + . ID=gene-ACYKK2_001509;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=ACYKK2_001509 DBLQKW010000042.1 Protein Homology CDS 3272 3847 . + 0 ID=cds-HIH2232119.1;Parent=gene-ACYKK2_001509;Dbxref=NCBI_GP:HIH2232119.1;Name=HIH2232119.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343482.1;locus_tag=ACYKK2_001509;product=ribonuclease HII;protein_id=HIH2232119.1;transl_table=11 DBLQKW010000042.1 tpg gene 3848 5293 . - . ID=gene-ACYKK2_001510;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=ACYKK2_001510 DBLQKW010000042.1 Protein Homology CDS 3848 5293 . - 0 ID=cds-HIH2232120.1;Parent=gene-ACYKK2_001510;Dbxref=NCBI_GP:HIH2232120.1;Name=HIH2232120.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343481.1;locus_tag=ACYKK2_001510;product=glutamate synthase subunit beta;protein_id=HIH2232120.1;transl_table=11 DBLQKW010000042.1 tpg gene 5303 9793 . - . ID=gene-ACYKK2_001511;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=ACYKK2_001511 DBLQKW010000042.1 Protein Homology CDS 5303 9793 . - 0 ID=cds-HIH2232121.1;Parent=gene-ACYKK2_001511;Dbxref=NCBI_GP:HIH2232121.1;Name=HIH2232121.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343479.1;locus_tag=ACYKK2_001511;product=glutamate synthase large subunit;protein_id=HIH2232121.1;transl_table=11 DBLQKW010000042.1 tpg gene 9927 11234 . - . ID=gene-ACYKK2_001512;Name=ACYKK2_001512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001512 DBLQKW010000042.1 Protein Homology CDS 9927 11234 . - 0 ID=cds-HIH2232122.1;Parent=gene-ACYKK2_001512;Dbxref=NCBI_GP:HIH2232122.1;Name=HIH2232122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343478.1;locus_tag=ACYKK2_001512;product=Na+/H+ antiporter family protein;protein_id=HIH2232122.1;transl_table=11 ##sequence-region DBLQKW010000043.1 1 11234 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000043.1 tpg region 1 11234 . + . ID=DBLQKW010000043.1:1..11234;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000043.1 tpg gene 48 2138 . + . ID=gene-ACYKK2_001513;Name=ACYKK2_001513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001513 DBLQKW010000043.1 Protein Homology CDS 48 2138 . + 0 ID=cds-HIH2232123.1;Parent=gene-ACYKK2_001513;Dbxref=NCBI_GP:HIH2232123.1;Name=HIH2232123.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345026.1;locus_tag=ACYKK2_001513;product=FTR1 family iron permease;protein_id=HIH2232123.1;transl_table=11 DBLQKW010000043.1 tpg gene 2135 2674 . + . ID=gene-ACYKK2_001514;Name=ACYKK2_001514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001514 DBLQKW010000043.1 Protein Homology CDS 2135 2674 . + 0 ID=cds-HIH2232124.1;Parent=gene-ACYKK2_001514;Dbxref=NCBI_GP:HIH2232124.1;Name=HIH2232124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345027.1;locus_tag=ACYKK2_001514;product=iron transporter;protein_id=HIH2232124.1;transl_table=11 DBLQKW010000043.1 tpg gene 2757 4160 . + . ID=gene-ACYKK2_001515;Name=ACYKK2_001515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001515 DBLQKW010000043.1 Protein Homology CDS 2757 4160 . + 0 ID=cds-HIH2232125.1;Parent=gene-ACYKK2_001515;Dbxref=NCBI_GP:HIH2232125.1;Name=HIH2232125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345028.1;locus_tag=ACYKK2_001515;product=Fe-S-containing protein;protein_id=HIH2232125.1;transl_table=11 DBLQKW010000043.1 tpg gene 4147 5439 . + . ID=gene-ACYKK2_001516;Name=ACYKK2_001516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001516 DBLQKW010000043.1 Protein Homology CDS 4147 5439 . + 0 ID=cds-HIH2232126.1;Parent=gene-ACYKK2_001516;Dbxref=NCBI_GP:HIH2232126.1;Name=HIH2232126.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345029.1;locus_tag=ACYKK2_001516;product=ABC transporter permease;protein_id=HIH2232126.1;transl_table=11 DBLQKW010000043.1 tpg gene 5429 6547 . + . ID=gene-ACYKK2_001517;Name=ACYKK2_001517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001517 DBLQKW010000043.1 Protein Homology CDS 5429 6547 . + 0 ID=cds-HIH2232127.1;Parent=gene-ACYKK2_001517;Dbxref=NCBI_GP:HIH2232127.1;Name=HIH2232127.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345030.1;locus_tag=ACYKK2_001517;product=ABC transporter permease;protein_id=HIH2232127.1;transl_table=11 DBLQKW010000043.1 tpg gene 6544 7197 . + . ID=gene-ACYKK2_001518;Name=ACYKK2_001518;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001518 DBLQKW010000043.1 Protein Homology CDS 6544 7197 . + 0 ID=cds-HIH2232128.1;Parent=gene-ACYKK2_001518;Dbxref=NCBI_GP:HIH2232128.1;Name=HIH2232128.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345031.1;locus_tag=ACYKK2_001518;product=ABC transporter ATP-binding protein;protein_id=HIH2232128.1;transl_table=11 DBLQKW010000043.1 tpg gene 7194 7682 . + . ID=gene-ACYKK2_001519;Name=ACYKK2_001519;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001519 DBLQKW010000043.1 Protein Homology CDS 7194 7682 . + 0 ID=cds-HIH2232129.1;Parent=gene-ACYKK2_001519;Dbxref=NCBI_GP:HIH2232129.1;Name=HIH2232129.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345032.1;locus_tag=ACYKK2_001519;product=TlpA family protein disulfide reductase;protein_id=HIH2232129.1;transl_table=11 DBLQKW010000043.1 tpg gene 7643 8146 . + . ID=gene-ACYKK2_001520;Name=ACYKK2_001520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001520 DBLQKW010000043.1 Protein Homology CDS 7643 8146 . + 0 ID=cds-HIH2232130.1;Parent=gene-ACYKK2_001520;Dbxref=NCBI_GP:HIH2232130.1;Name=HIH2232130.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345033.1;locus_tag=ACYKK2_001520;product=TlpA family protein disulfide reductase;protein_id=HIH2232130.1;transl_table=11 DBLQKW010000043.1 tpg gene 8155 8592 . - . ID=gene-ACYKK2_001521;Name=ACYKK2_001521;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001521 DBLQKW010000043.1 Protein Homology CDS 8155 8592 . - 0 ID=cds-HIH2232131.1;Parent=gene-ACYKK2_001521;Dbxref=NCBI_GP:HIH2232131.1;Name=HIH2232131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345034.1;locus_tag=ACYKK2_001521;product=DUF411 domain-containing protein;protein_id=HIH2232131.1;transl_table=11 DBLQKW010000043.1 tpg gene 8892 9308 . - . ID=gene-ACYKK2_001522;Name=ACYKK2_001522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001522 DBLQKW010000043.1 Protein Homology CDS 8892 9308 . - 0 ID=cds-HIH2232132.1;Parent=gene-ACYKK2_001522;Dbxref=NCBI_GP:HIH2232132.1;Name=HIH2232132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345036.1;locus_tag=ACYKK2_001522;product=hypothetical protein;protein_id=HIH2232132.1;transl_table=11 DBLQKW010000043.1 tpg gene 9844 10131 . - . ID=gene-ACYKK2_001523;Name=ACYKK2_001523;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001523 DBLQKW010000043.1 Protein Homology CDS 9844 10131 . - 0 ID=cds-HIH2232133.1;Parent=gene-ACYKK2_001523;Dbxref=NCBI_GP:HIH2232133.1;Name=HIH2232133.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002926587.1;locus_tag=ACYKK2_001523;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=HIH2232133.1;transl_table=11 DBLQKW010000043.1 tpg gene 10131 10361 . - . ID=gene-ACYKK2_001524;Name=ACYKK2_001524;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001524 DBLQKW010000043.1 GeneMarkS-2+ CDS 10131 10361 . - 0 ID=cds-HIH2232134.1;Parent=gene-ACYKK2_001524;Dbxref=NCBI_GP:HIH2232134.1;Name=HIH2232134.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001524;product=hypothetical protein;protein_id=HIH2232134.1;transl_table=11 DBLQKW010000043.1 tpg gene 10803 11171 . - . ID=gene-ACYKK2_001525;Name=ACYKK2_001525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001525 DBLQKW010000043.1 GeneMarkS-2+ CDS 10803 11171 . - 0 ID=cds-HIH2232135.1;Parent=gene-ACYKK2_001525;Dbxref=NCBI_GP:HIH2232135.1;Name=HIH2232135.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001525;product=hypothetical protein;protein_id=HIH2232135.1;transl_table=11 ##sequence-region DBLQKW010000044.1 1 11221 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000044.1 tpg region 1 11221 . + . ID=DBLQKW010000044.1:1..11221;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000044.1 tpg gene 128 439 . + . ID=gene-ACYKK2_001526;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=ACYKK2_001526 DBLQKW010000044.1 Protein Homology CDS 128 439 . + 0 ID=cds-HIH2232136.1;Parent=gene-ACYKK2_001526;Dbxref=NCBI_GP:HIH2232136.1;Name=HIH2232136.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345074.1;locus_tag=ACYKK2_001526;product=30S ribosomal protein S10;protein_id=HIH2232136.1;transl_table=11 DBLQKW010000044.1 tpg gene 449 1024 . + . ID=gene-ACYKK2_001527;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=ACYKK2_001527 DBLQKW010000044.1 Protein Homology CDS 449 1024 . + 0 ID=cds-HIH2232137.1;Parent=gene-ACYKK2_001527;Dbxref=NCBI_GP:HIH2232137.1;Name=HIH2232137.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345073.1;locus_tag=ACYKK2_001527;product=50S ribosomal protein L3;protein_id=HIH2232137.1;transl_table=11 DBLQKW010000044.1 tpg gene 1021 1635 . + . ID=gene-ACYKK2_001528;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=ACYKK2_001528 DBLQKW010000044.1 Protein Homology CDS 1021 1635 . + 0 ID=cds-HIH2232138.1;Parent=gene-ACYKK2_001528;Dbxref=NCBI_GP:HIH2232138.1;Name=HIH2232138.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345072.1;locus_tag=ACYKK2_001528;product=50S ribosomal protein L4;protein_id=HIH2232138.1;transl_table=11 DBLQKW010000044.1 tpg gene 1638 1919 . + . ID=gene-ACYKK2_001529;Name=ACYKK2_001529;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001529 DBLQKW010000044.1 Protein Homology CDS 1638 1919 . + 0 ID=cds-HIH2232139.1;Parent=gene-ACYKK2_001529;Dbxref=NCBI_GP:HIH2232139.1;Name=HIH2232139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345071.1;locus_tag=ACYKK2_001529;product=50S ribosomal protein L23;protein_id=HIH2232139.1;transl_table=11 DBLQKW010000044.1 tpg gene 1921 2751 . + . ID=gene-ACYKK2_001530;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=ACYKK2_001530 DBLQKW010000044.1 Protein Homology CDS 1921 2751 . + 0 ID=cds-HIH2232140.1;Parent=gene-ACYKK2_001530;Dbxref=NCBI_GP:HIH2232140.1;Name=HIH2232140.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012660814.1;locus_tag=ACYKK2_001530;product=50S ribosomal protein L2;protein_id=HIH2232140.1;transl_table=11 DBLQKW010000044.1 tpg gene 2753 3034 . + . ID=gene-ACYKK2_001531;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=ACYKK2_001531 DBLQKW010000044.1 Protein Homology CDS 2753 3034 . + 0 ID=cds-HIH2232141.1;Parent=gene-ACYKK2_001531;Dbxref=NCBI_GP:HIH2232141.1;Name=HIH2232141.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345069.1;locus_tag=ACYKK2_001531;product=30S ribosomal protein S19;protein_id=HIH2232141.1;transl_table=11 DBLQKW010000044.1 tpg gene 3045 3470 . + . ID=gene-ACYKK2_001532;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=ACYKK2_001532 DBLQKW010000044.1 Protein Homology CDS 3045 3470 . + 0 ID=cds-HIH2232142.1;Parent=gene-ACYKK2_001532;Dbxref=NCBI_GP:HIH2232142.1;Name=HIH2232142.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345068.1;locus_tag=ACYKK2_001532;product=50S ribosomal protein L22;protein_id=HIH2232142.1;transl_table=11 DBLQKW010000044.1 tpg gene 3470 4171 . + . ID=gene-ACYKK2_001533;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=ACYKK2_001533 DBLQKW010000044.1 Protein Homology CDS 3470 4171 . + 0 ID=cds-HIH2232143.1;Parent=gene-ACYKK2_001533;Dbxref=NCBI_GP:HIH2232143.1;Name=HIH2232143.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345067.1;locus_tag=ACYKK2_001533;product=30S ribosomal protein S3;protein_id=HIH2232143.1;transl_table=11 DBLQKW010000044.1 tpg gene 4174 4599 . + . ID=gene-ACYKK2_001534;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=ACYKK2_001534 DBLQKW010000044.1 Protein Homology CDS 4174 4599 . + 0 ID=cds-HIH2232144.1;Parent=gene-ACYKK2_001534;Dbxref=NCBI_GP:HIH2232144.1;Name=HIH2232144.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345066.1;locus_tag=ACYKK2_001534;product=50S ribosomal protein L16;protein_id=HIH2232144.1;transl_table=11 DBLQKW010000044.1 tpg gene 4586 4771 . + . ID=gene-ACYKK2_001535;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=ACYKK2_001535 DBLQKW010000044.1 Protein Homology CDS 4586 4771 . + 0 ID=cds-HIH2232145.1;Parent=gene-ACYKK2_001535;Dbxref=NCBI_GP:HIH2232145.1;Name=HIH2232145.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345065.1;locus_tag=ACYKK2_001535;product=50S ribosomal protein L29;protein_id=HIH2232145.1;transl_table=11 DBLQKW010000044.1 tpg gene 4781 5032 . + . ID=gene-ACYKK2_001536;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=ACYKK2_001536 DBLQKW010000044.1 Protein Homology CDS 4781 5032 . + 0 ID=cds-HIH2232146.1;Parent=gene-ACYKK2_001536;Dbxref=NCBI_GP:HIH2232146.1;Name=HIH2232146.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345064.1;locus_tag=ACYKK2_001536;product=30S ribosomal protein S17;protein_id=HIH2232146.1;transl_table=11 DBLQKW010000044.1 tpg gene 5032 5400 . + . ID=gene-ACYKK2_001537;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=ACYKK2_001537 DBLQKW010000044.1 Protein Homology CDS 5032 5400 . + 0 ID=cds-HIH2232147.1;Parent=gene-ACYKK2_001537;Dbxref=NCBI_GP:HIH2232147.1;Name=HIH2232147.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015106543.1;locus_tag=ACYKK2_001537;product=50S ribosomal protein L14;protein_id=HIH2232147.1;transl_table=11 DBLQKW010000044.1 tpg gene 5400 5633 . + . ID=gene-ACYKK2_001538;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=ACYKK2_001538 DBLQKW010000044.1 Protein Homology CDS 5400 5633 . + 0 ID=cds-HIH2232148.1;Parent=gene-ACYKK2_001538;Dbxref=NCBI_GP:HIH2232148.1;Name=HIH2232148.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345062.1;locus_tag=ACYKK2_001538;product=50S ribosomal protein L24;protein_id=HIH2232148.1;transl_table=11 DBLQKW010000044.1 tpg gene 5637 6182 . + . ID=gene-ACYKK2_001539;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=ACYKK2_001539 DBLQKW010000044.1 Protein Homology CDS 5637 6182 . + 0 ID=cds-HIH2232149.1;Parent=gene-ACYKK2_001539;Dbxref=NCBI_GP:HIH2232149.1;Name=HIH2232149.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345061.1;locus_tag=ACYKK2_001539;product=50S ribosomal protein L5;protein_id=HIH2232149.1;transl_table=11 DBLQKW010000044.1 tpg gene 6184 6369 . + . ID=gene-ACYKK2_001540;Name=ACYKK2_001540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001540 DBLQKW010000044.1 Protein Homology CDS 6184 6369 . + 0 ID=cds-HIH2232150.1;Parent=gene-ACYKK2_001540;Dbxref=NCBI_GP:HIH2232150.1;Name=HIH2232150.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001085694.1;locus_tag=ACYKK2_001540;product=type Z 30S ribosomal protein S14;protein_id=HIH2232150.1;transl_table=11 DBLQKW010000044.1 tpg gene 6379 6774 . + . ID=gene-ACYKK2_001541;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=ACYKK2_001541 DBLQKW010000044.1 Protein Homology CDS 6379 6774 . + 0 ID=cds-HIH2232151.1;Parent=gene-ACYKK2_001541;Dbxref=NCBI_GP:HIH2232151.1;Name=HIH2232151.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345059.1;locus_tag=ACYKK2_001541;product=30S ribosomal protein S8;protein_id=HIH2232151.1;transl_table=11 DBLQKW010000044.1 tpg gene 6853 7389 . + . ID=gene-ACYKK2_001542;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=ACYKK2_001542 DBLQKW010000044.1 Protein Homology CDS 6853 7389 . + 0 ID=cds-HIH2232152.1;Parent=gene-ACYKK2_001542;Dbxref=NCBI_GP:HIH2232152.1;Name=HIH2232152.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345058.1;locus_tag=ACYKK2_001542;product=50S ribosomal protein L6;protein_id=HIH2232152.1;transl_table=11 DBLQKW010000044.1 tpg gene 7399 7755 . + . ID=gene-ACYKK2_001543;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=ACYKK2_001543 DBLQKW010000044.1 Protein Homology CDS 7399 7755 . + 0 ID=cds-HIH2232153.1;Parent=gene-ACYKK2_001543;Dbxref=NCBI_GP:HIH2232153.1;Name=HIH2232153.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345057.1;locus_tag=ACYKK2_001543;product=50S ribosomal protein L18;protein_id=HIH2232153.1;transl_table=11 DBLQKW010000044.1 tpg gene 7767 8210 . + . ID=gene-ACYKK2_001544;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=ACYKK2_001544 DBLQKW010000044.1 Protein Homology CDS 7767 8210 . + 0 ID=cds-HIH2232154.1;Parent=gene-ACYKK2_001544;Dbxref=NCBI_GP:HIH2232154.1;Name=HIH2232154.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345056.1;locus_tag=ACYKK2_001544;product=30S ribosomal protein S5;protein_id=HIH2232154.1;transl_table=11 DBLQKW010000044.1 tpg gene 8215 8607 . + . ID=gene-ACYKK2_001545;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=ACYKK2_001545 DBLQKW010000044.1 Protein Homology CDS 8215 8607 . + 0 ID=cds-HIH2232155.1;Parent=gene-ACYKK2_001545;Dbxref=NCBI_GP:HIH2232155.1;Name=HIH2232155.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345055.1;locus_tag=ACYKK2_001545;product=50S ribosomal protein L15;protein_id=HIH2232155.1;transl_table=11 DBLQKW010000044.1 tpg gene 8607 9872 . + . ID=gene-ACYKK2_001546;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=ACYKK2_001546 DBLQKW010000044.1 Protein Homology CDS 8607 9872 . + 0 ID=cds-HIH2232156.1;Parent=gene-ACYKK2_001546;Dbxref=NCBI_GP:HIH2232156.1;Name=HIH2232156.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345054.1;locus_tag=ACYKK2_001546;product=preprotein translocase subunit SecY;protein_id=HIH2232156.1;transl_table=11 DBLQKW010000044.1 tpg gene 9900 11171 . - . ID=gene-ACYKK2_001547;Name=ACYKK2_001547;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001547 DBLQKW010000044.1 Protein Homology CDS 9900 11171 . - 0 ID=cds-HIH2232157.1;Parent=gene-ACYKK2_001547;Dbxref=NCBI_GP:HIH2232157.1;Name=HIH2232157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345053.1;locus_tag=ACYKK2_001547;product=MFS transporter;protein_id=HIH2232157.1;transl_table=11 ##sequence-region DBLQKW010000045.1 1 11155 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000045.1 tpg region 1 11155 . + . ID=DBLQKW010000045.1:1..11155;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000045.1 tpg gene 1 376 . + . ID=gene-ACYKK2_001548;Name=ACYKK2_001548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001548;partial=true;start_range=.,1 DBLQKW010000045.1 Protein Homology CDS 1 376 . + 1 ID=cds-HIH2232158.1;Parent=gene-ACYKK2_001548;Dbxref=NCBI_GP:HIH2232158.1;Name=HIH2232158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344399.1;locus_tag=ACYKK2_001548;partial=true;product=PepSY-like domain-containing protein;protein_id=HIH2232158.1;start_range=.,1;transl_table=11 DBLQKW010000045.1 tpg gene 385 2001 . - . ID=gene-ACYKK2_001549;Name=ACYKK2_001549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001549 DBLQKW010000045.1 Protein Homology CDS 385 2001 . - 0 ID=cds-HIH2232159.1;Parent=gene-ACYKK2_001549;Dbxref=NCBI_GP:HIH2232159.1;Name=HIH2232159.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344400.1;locus_tag=ACYKK2_001549;product=AAA family ATPase;protein_id=HIH2232159.1;transl_table=11 DBLQKW010000045.1 tpg gene 2005 3255 . - . ID=gene-ACYKK2_001550;Name=mtaB;gbkey=Gene;gene=mtaB;gene_biotype=protein_coding;locus_tag=ACYKK2_001550 DBLQKW010000045.1 Protein Homology CDS 2005 3255 . - 0 ID=cds-HIH2232160.1;Parent=gene-ACYKK2_001550;Dbxref=NCBI_GP:HIH2232160.1;Name=HIH2232160.1;Ontology_term=GO:0006400,GO:0035598,GO:0051539,GO:1904047;gbkey=CDS;gene=mtaB;go_function=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase activity|0035598||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344401.1;locus_tag=ACYKK2_001550;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;protein_id=HIH2232160.1;transl_table=11 DBLQKW010000045.1 tpg gene 3252 4823 . - . ID=gene-ACYKK2_001551;Name=ACYKK2_001551;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001551 DBLQKW010000045.1 Protein Homology CDS 3252 4823 . - 0 ID=cds-HIH2232161.1;Parent=gene-ACYKK2_001551;Dbxref=NCBI_GP:HIH2232161.1;Name=HIH2232161.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344402.1;locus_tag=ACYKK2_001551;product=mechanosensitive ion channel domain-containing protein;protein_id=HIH2232161.1;transl_table=11 DBLQKW010000045.1 tpg gene 4820 5875 . - . ID=gene-ACYKK2_001552;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=ACYKK2_001552 DBLQKW010000045.1 Protein Homology CDS 4820 5875 . - 0 ID=cds-HIH2232162.1;Parent=gene-ACYKK2_001552;Dbxref=NCBI_GP:HIH2232162.1;Name=HIH2232162.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344403.1;locus_tag=ACYKK2_001552;product=3-dehydroquinate synthase;protein_id=HIH2232162.1;transl_table=11 DBLQKW010000045.1 tpg gene 5921 7321 . - . ID=gene-ACYKK2_001553;Name=ACYKK2_001553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001553 DBLQKW010000045.1 Protein Homology CDS 5921 7321 . - 0 ID=cds-HIH2232163.1;Parent=gene-ACYKK2_001553;Dbxref=NCBI_GP:HIH2232163.1;Name=HIH2232163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344404.1;locus_tag=ACYKK2_001553;product=COG3400 family protein;protein_id=HIH2232163.1;transl_table=11 DBLQKW010000045.1 tpg gene 7351 8472 . + . ID=gene-ACYKK2_001554;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=ACYKK2_001554 DBLQKW010000045.1 Protein Homology CDS 7351 8472 . + 0 ID=cds-HIH2232164.1;Parent=gene-ACYKK2_001554;Dbxref=NCBI_GP:HIH2232164.1;Name=HIH2232164.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344405.1;locus_tag=ACYKK2_001554;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=HIH2232164.1;transl_table=11 DBLQKW010000045.1 tpg gene 8474 9241 . + . ID=gene-ACYKK2_001555;Name=ACYKK2_001555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001555 DBLQKW010000045.1 Protein Homology CDS 8474 9241 . + 0 ID=cds-HIH2232165.1;Parent=gene-ACYKK2_001555;Dbxref=NCBI_GP:HIH2232165.1;Name=HIH2232165.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344406.1;locus_tag=ACYKK2_001555;product=CorA family divalent cation transporter;protein_id=HIH2232165.1;transl_table=11 DBLQKW010000045.1 tpg gene 9294 9370 . + . ID=gene-ACYKK2_001556;Name=ACYKK2_001556;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_001556 DBLQKW010000045.1 tRNAscan-SE tRNA 9294 9370 . + . ID=rna-ACYKK2_001556;Parent=gene-ACYKK2_001556;anticodon=(pos:9328..9330);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001556;product=tRNA-Arg DBLQKW010000045.1 tRNAscan-SE exon 9294 9370 . + . ID=exon-ACYKK2_001556-1;Parent=rna-ACYKK2_001556;anticodon=(pos:9328..9330);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001556;product=tRNA-Arg DBLQKW010000045.1 tpg pseudogene 9695 10138 . + . ID=gene-ACYKK2_001557;Name=ACYKK2_001557;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001557;pseudo=true DBLQKW010000045.1 Protein Homology CDS 9695 10138 . + 0 ID=cds-ACYKK2_001557;Parent=gene-ACYKK2_001557;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002867921.1;locus_tag=ACYKK2_001557;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 DBLQKW010000045.1 tpg gene 10189 11127 . - . ID=gene-ACYKK2_001558;Name=ACYKK2_001558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001558 DBLQKW010000045.1 Protein Homology CDS 10189 11127 . - 0 ID=cds-HIH2232166.1;Parent=gene-ACYKK2_001558;Dbxref=NCBI_GP:HIH2232166.1;Name=HIH2232166.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938923.1;locus_tag=ACYKK2_001558;product=tyrosine-type recombinase/integrase;protein_id=HIH2232166.1;transl_table=11 ##sequence-region DBLQKW010000046.1 1 10985 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000046.1 tpg region 1 10985 . + . ID=DBLQKW010000046.1:1..10985;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000046.1 tpg gene 31 687 . - . ID=gene-ACYKK2_001559;Name=ACYKK2_001559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001559 DBLQKW010000046.1 Protein Homology CDS 31 687 . - 0 ID=cds-HIH2232167.1;Parent=gene-ACYKK2_001559;Dbxref=NCBI_GP:HIH2232167.1;Name=HIH2232167.1;Ontology_term=GO:0006089;gbkey=CDS;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343535.1;locus_tag=ACYKK2_001559;product=LutC/YkgG family protein;protein_id=HIH2232167.1;transl_table=11 DBLQKW010000046.1 tpg gene 680 2119 . - . ID=gene-ACYKK2_001560;Name=ACYKK2_001560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001560 DBLQKW010000046.1 Protein Homology CDS 680 2119 . - 0 ID=cds-HIH2232168.1;Parent=gene-ACYKK2_001560;Dbxref=NCBI_GP:HIH2232168.1;Name=HIH2232168.1;Ontology_term=GO:0006089,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343536.1;locus_tag=ACYKK2_001560;product=LutB/LldF family L-lactate oxidation iron-sulfur protein;protein_id=HIH2232168.1;transl_table=11 DBLQKW010000046.1 tpg gene 2116 2856 . - . ID=gene-ACYKK2_001561;Name=ACYKK2_001561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001561 DBLQKW010000046.1 Protein Homology CDS 2116 2856 . - 0 ID=cds-HIH2232169.1;Parent=gene-ACYKK2_001561;Dbxref=NCBI_GP:HIH2232169.1;Name=HIH2232169.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343537.1;locus_tag=ACYKK2_001561;product=(Fe-S)-binding protein;protein_id=HIH2232169.1;transl_table=11 DBLQKW010000046.1 tpg gene 2980 4662 . - . ID=gene-ACYKK2_001562;Name=ACYKK2_001562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001562 DBLQKW010000046.1 Protein Homology CDS 2980 4662 . - 0 ID=cds-HIH2232170.1;Parent=gene-ACYKK2_001562;Dbxref=NCBI_GP:HIH2232170.1;Name=HIH2232170.1;Ontology_term=GO:0015727,GO:0015129,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA,solute:proton symporter activity|0015295||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343538.1;locus_tag=ACYKK2_001562;product=L-lactate permease;protein_id=HIH2232170.1;transl_table=11 DBLQKW010000046.1 tpg gene 4834 5403 . - . ID=gene-ACYKK2_001563;Name=cdtC;gbkey=Gene;gene=cdtC;gene_biotype=protein_coding;locus_tag=ACYKK2_001563 DBLQKW010000046.1 Protein Homology CDS 4834 5403 . - 0 ID=cds-HIH2232171.1;Parent=gene-ACYKK2_001563;Dbxref=NCBI_GP:HIH2232171.1;Name=HIH2232171.1;gbkey=CDS;gene=cdtC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343539.1;locus_tag=ACYKK2_001563;product=cytolethal distending toxin subunit Cj-CdtC;protein_id=HIH2232171.1;transl_table=11 DBLQKW010000046.1 tpg gene 5414 6211 . - . ID=gene-ACYKK2_001564;Name=cdtB;gbkey=Gene;gene=cdtB;gene_biotype=protein_coding;locus_tag=ACYKK2_001564 DBLQKW010000046.1 Protein Homology CDS 5414 6211 . - 0 ID=cds-HIH2232172.1;Parent=gene-ACYKK2_001564;Dbxref=NCBI_GP:HIH2232172.1;Name=HIH2232172.1;gbkey=CDS;gene=cdtB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343540.1;locus_tag=ACYKK2_001564;product=cytolethal distending toxin nuclease subunit Cj-CdtB;protein_id=HIH2232172.1;transl_table=11 DBLQKW010000046.1 tpg gene 6208 7014 . - . ID=gene-ACYKK2_001565;Name=cdtA;gbkey=Gene;gene=cdtA;gene_biotype=protein_coding;locus_tag=ACYKK2_001565 DBLQKW010000046.1 Protein Homology CDS 6208 7014 . - 0 ID=cds-HIH2232173.1;Parent=gene-ACYKK2_001565;Dbxref=NCBI_GP:HIH2232173.1;Name=HIH2232173.1;gbkey=CDS;gene=cdtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343541.1;locus_tag=ACYKK2_001565;product=cytolethal distending toxin subunit Cj-CdtA;protein_id=HIH2232173.1;transl_table=11 DBLQKW010000046.1 tpg gene 7127 7360 . + . ID=gene-ACYKK2_001566;Name=ACYKK2_001566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001566 DBLQKW010000046.1 Protein Homology CDS 7127 7360 . + 0 ID=cds-HIH2232174.1;Parent=gene-ACYKK2_001566;Dbxref=NCBI_GP:HIH2232174.1;Name=HIH2232174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002928786.1;locus_tag=ACYKK2_001566;product=DUF4492 domain-containing protein;protein_id=HIH2232174.1;transl_table=11 DBLQKW010000046.1 tpg gene 7361 8923 . + . ID=gene-ACYKK2_001567;Name=ACYKK2_001567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001567 DBLQKW010000046.1 Protein Homology CDS 7361 8923 . + 0 ID=cds-HIH2232175.1;Parent=gene-ACYKK2_001567;Dbxref=NCBI_GP:HIH2232175.1;Name=HIH2232175.1;Ontology_term=GO:0019646,GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343543.1;locus_tag=ACYKK2_001567;product=cytochrome ubiquinol oxidase subunit I;protein_id=HIH2232175.1;transl_table=11 DBLQKW010000046.1 tpg gene 8923 10047 . + . ID=gene-ACYKK2_001568;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=ACYKK2_001568 DBLQKW010000046.1 Protein Homology CDS 8923 10047 . + 0 ID=cds-HIH2232176.1;Parent=gene-ACYKK2_001568;Dbxref=NCBI_GP:HIH2232176.1;Name=HIH2232176.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343544.1;locus_tag=ACYKK2_001568;product=cytochrome d ubiquinol oxidase subunit II;protein_id=HIH2232176.1;transl_table=11 DBLQKW010000046.1 tpg gene 10241 10936 . - . ID=gene-ACYKK2_001569;Name=ACYKK2_001569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001569 DBLQKW010000046.1 Protein Homology CDS 10241 10936 . - 0 ID=cds-HIH2232177.1;Parent=gene-ACYKK2_001569;Dbxref=NCBI_GP:HIH2232177.1;Name=HIH2232177.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343545.1;locus_tag=ACYKK2_001569;product=aspartate/glutamate racemase family protein;protein_id=HIH2232177.1;transl_table=11 ##sequence-region DBLQKW010000047.1 1 10970 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000047.1 tpg region 1 10970 . + . ID=DBLQKW010000047.1:1..10970;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000047.1 tpg pseudogene 79 797 . + . ID=gene-ACYKK2_001570;Name=ACYKK2_001570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001570;pseudo=true DBLQKW010000047.1 Protein Homology CDS 79 797 . + 0 ID=cds-ACYKK2_001570;Parent=gene-ACYKK2_001570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344153.1;locus_tag=ACYKK2_001570;product=hypothetical protein;pseudo=true;transl_table=11 DBLQKW010000047.1 tpg gene 727 2655 . + . ID=gene-ACYKK2_001571;Name=ACYKK2_001571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001571 DBLQKW010000047.1 Protein Homology CDS 727 2655 . + 0 ID=cds-HIH2232178.1;Parent=gene-ACYKK2_001571;Dbxref=NCBI_GP:HIH2232178.1;Name=HIH2232178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344154.1;locus_tag=ACYKK2_001571;product=hypothetical protein;protein_id=HIH2232178.1;transl_table=11 DBLQKW010000047.1 tpg gene 2667 4109 . + . ID=gene-ACYKK2_001572;Name=ACYKK2_001572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001572 DBLQKW010000047.1 Protein Homology CDS 2667 4109 . + 0 ID=cds-HIH2232179.1;Parent=gene-ACYKK2_001572;Dbxref=NCBI_GP:HIH2232179.1;Name=HIH2232179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002874703.1;locus_tag=ACYKK2_001572;product=filamentous hemagglutinin N-terminal domain-containing protein;protein_id=HIH2232179.1;transl_table=11 DBLQKW010000047.1 tpg gene 4265 5200 . + . ID=gene-ACYKK2_001573;Name=ACYKK2_001573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001573 DBLQKW010000047.1 Protein Homology CDS 4265 5200 . + 0 ID=cds-HIH2232180.1;Parent=gene-ACYKK2_001573;Dbxref=NCBI_GP:HIH2232180.1;Name=HIH2232180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002870269.1;locus_tag=ACYKK2_001573;product=hypothetical protein;protein_id=HIH2232180.1;transl_table=11 DBLQKW010000047.1 tpg gene 5841 6008 . + . ID=gene-ACYKK2_001574;Name=ACYKK2_001574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001574 DBLQKW010000047.1 GeneMarkS-2+ CDS 5841 6008 . + 0 ID=cds-HIH2232181.1;Parent=gene-ACYKK2_001574;Dbxref=NCBI_GP:HIH2232181.1;Name=HIH2232181.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001574;product=hypothetical protein;protein_id=HIH2232181.1;transl_table=11 DBLQKW010000047.1 tpg gene 6266 6583 . + . ID=gene-ACYKK2_001575;Name=ACYKK2_001575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001575 DBLQKW010000047.1 GeneMarkS-2+ CDS 6266 6583 . + 0 ID=cds-HIH2232182.1;Parent=gene-ACYKK2_001575;Dbxref=NCBI_GP:HIH2232182.1;Name=HIH2232182.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001575;product=hypothetical protein;protein_id=HIH2232182.1;transl_table=11 DBLQKW010000047.1 tpg gene 6848 6991 . + . ID=gene-ACYKK2_001576;Name=ACYKK2_001576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001576 DBLQKW010000047.1 GeneMarkS-2+ CDS 6848 6991 . + 0 ID=cds-HIH2232183.1;Parent=gene-ACYKK2_001576;Dbxref=NCBI_GP:HIH2232183.1;Name=HIH2232183.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001576;product=hypothetical protein;protein_id=HIH2232183.1;transl_table=11 DBLQKW010000047.1 tpg gene 7495 9007 . + . ID=gene-ACYKK2_001577;Name=ACYKK2_001577;gbkey=Gene;gene_biotype=rRNA;locus_tag=ACYKK2_001577 DBLQKW010000047.1 cmsearch rRNA 7495 9007 . + . ID=rna-ACYKK2_001577;Parent=gene-ACYKK2_001577;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKK2_001577;product=16S ribosomal RNA DBLQKW010000047.1 cmsearch exon 7495 9007 . + . ID=exon-ACYKK2_001577-1;Parent=rna-ACYKK2_001577;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKK2_001577;product=16S ribosomal RNA DBLQKW010000047.1 tpg gene 9110 9185 . + . ID=gene-ACYKK2_001578;Name=ACYKK2_001578;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_001578 DBLQKW010000047.1 tRNAscan-SE tRNA 9110 9185 . + . ID=rna-ACYKK2_001578;Parent=gene-ACYKK2_001578;anticodon=(pos:9143..9145);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001578;product=tRNA-Ala DBLQKW010000047.1 tRNAscan-SE exon 9110 9185 . + . ID=exon-ACYKK2_001578-1;Parent=rna-ACYKK2_001578;anticodon=(pos:9143..9145);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001578;product=tRNA-Ala DBLQKW010000047.1 tpg gene 9194 9270 . + . ID=gene-ACYKK2_001579;Name=ACYKK2_001579;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_001579 DBLQKW010000047.1 tRNAscan-SE tRNA 9194 9270 . + . ID=rna-ACYKK2_001579;Parent=gene-ACYKK2_001579;anticodon=(pos:9228..9230);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001579;product=tRNA-Ile DBLQKW010000047.1 tRNAscan-SE exon 9194 9270 . + . ID=exon-ACYKK2_001579-1;Parent=rna-ACYKK2_001579;anticodon=(pos:9228..9230);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001579;product=tRNA-Ile DBLQKW010000047.1 tpg gene 9804 10970 . + . ID=gene-ACYKK2_001580;Name=ACYKK2_001580;end_range=10970,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=ACYKK2_001580;partial=true DBLQKW010000047.1 cmsearch rRNA 9804 10970 . + . ID=rna-ACYKK2_001580;Parent=gene-ACYKK2_001580;Dbxref=RFAM:RF02541;end_range=10970,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKK2_001580;partial=true;product=23S ribosomal RNA DBLQKW010000047.1 cmsearch exon 9804 10970 . + . ID=exon-ACYKK2_001580-1;Parent=rna-ACYKK2_001580;Dbxref=RFAM:RF02541;end_range=10970,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKK2_001580;partial=true;product=23S ribosomal RNA ##sequence-region DBLQKW010000048.1 1 10942 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000048.1 tpg region 1 10942 . + . ID=DBLQKW010000048.1:1..10942;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000048.1 tpg gene 1 4282 . + . ID=gene-ACYKK2_001581;Name=ACYKK2_001581;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001581;partial=true;start_range=.,1 DBLQKW010000048.1 Protein Homology CDS 1 4282 . + 1 ID=cds-HIH2232184.1;Parent=gene-ACYKK2_001581;Dbxref=NCBI_GP:HIH2232184.1;Name=HIH2232184.1;Ontology_term=GO:0005524,GO:0140658;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019109209.1;locus_tag=ACYKK2_001581;partial=true;product=SNF2-related protein;protein_id=HIH2232184.1;start_range=.,1;transl_table=11 DBLQKW010000048.1 tpg gene 4536 5147 . + . ID=gene-ACYKK2_001582;Name=ACYKK2_001582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001582 DBLQKW010000048.1 Protein Homology CDS 4536 5147 . + 0 ID=cds-HIH2232185.1;Parent=gene-ACYKK2_001582;Dbxref=NCBI_GP:HIH2232185.1;Name=HIH2232185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002873834.1;locus_tag=ACYKK2_001582;product=NYN domain-containing protein;protein_id=HIH2232185.1;transl_table=11 DBLQKW010000048.1 tpg gene 5157 5861 . - . ID=gene-ACYKK2_001583;Name=ACYKK2_001583;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001583 DBLQKW010000048.1 Protein Homology CDS 5157 5861 . - 0 ID=cds-HIH2232186.1;Parent=gene-ACYKK2_001583;Dbxref=NCBI_GP:HIH2232186.1;Name=HIH2232186.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002790552.1;locus_tag=ACYKK2_001583;product=GNAT family N-acetyltransferase;protein_id=HIH2232186.1;transl_table=11 DBLQKW010000048.1 tpg gene 5884 7272 . - . ID=gene-ACYKK2_001584;Name=mobP1;gbkey=Gene;gene=mobP1;gene_biotype=protein_coding;locus_tag=ACYKK2_001584 DBLQKW010000048.1 Protein Homology CDS 5884 7272 . - 0 ID=cds-HIH2232187.1;Parent=gene-ACYKK2_001584;Dbxref=NCBI_GP:HIH2232187.1;Name=HIH2232187.1;gbkey=CDS;gene=mobP1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002864936.1;locus_tag=ACYKK2_001584;product=MobP1 family relaxase;protein_id=HIH2232187.1;transl_table=11 DBLQKW010000048.1 tpg gene 7272 7823 . - . ID=gene-ACYKK2_001585;Name=ACYKK2_001585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001585 DBLQKW010000048.1 GeneMarkS-2+ CDS 7272 7823 . - 0 ID=cds-HIH2232188.1;Parent=gene-ACYKK2_001585;Dbxref=NCBI_GP:HIH2232188.1;Name=HIH2232188.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001585;product=hypothetical protein;protein_id=HIH2232188.1;transl_table=11 DBLQKW010000048.1 tpg gene 8017 8298 . + . ID=gene-ACYKK2_001586;Name=ACYKK2_001586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001586 DBLQKW010000048.1 Protein Homology CDS 8017 8298 . + 0 ID=cds-HIH2232189.1;Parent=gene-ACYKK2_001586;Dbxref=NCBI_GP:HIH2232189.1;Name=HIH2232189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002839419.1;locus_tag=ACYKK2_001586;product=hypothetical protein;protein_id=HIH2232189.1;transl_table=11 DBLQKW010000048.1 tpg gene 8327 8938 . + . ID=gene-ACYKK2_001587;Name=ACYKK2_001587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001587 DBLQKW010000048.1 Protein Homology CDS 8327 8938 . + 0 ID=cds-HIH2232190.1;Parent=gene-ACYKK2_001587;Dbxref=NCBI_GP:HIH2232190.1;Name=HIH2232190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002864057.1;locus_tag=ACYKK2_001587;product=NTPase;protein_id=HIH2232190.1;transl_table=11 DBLQKW010000048.1 tpg gene 8942 9601 . + . ID=gene-ACYKK2_001588;Name=ACYKK2_001588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001588 DBLQKW010000048.1 Protein Homology CDS 8942 9601 . + 0 ID=cds-HIH2232191.1;Parent=gene-ACYKK2_001588;Dbxref=NCBI_GP:HIH2232191.1;Name=HIH2232191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002826066.1;locus_tag=ACYKK2_001588;product=hypothetical protein;protein_id=HIH2232191.1;transl_table=11 DBLQKW010000048.1 tpg gene 9684 10910 . + . ID=gene-ACYKK2_001589;Name=ACYKK2_001589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001589 DBLQKW010000048.1 Protein Homology CDS 9684 10910 . + 0 ID=cds-HIH2232192.1;Parent=gene-ACYKK2_001589;Dbxref=NCBI_GP:HIH2232192.1;Name=HIH2232192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002823310.1;locus_tag=ACYKK2_001589;product=DUF5710 domain-containing protein;protein_id=HIH2232192.1;transl_table=11 ##sequence-region DBLQKW010000049.1 1 10822 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000049.1 tpg region 1 10822 . + . ID=DBLQKW010000049.1:1..10822;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000049.1 tpg gene 47 742 . + . ID=gene-ACYKK2_001590;Name=ACYKK2_001590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001590 DBLQKW010000049.1 Protein Homology CDS 47 742 . + 0 ID=cds-HIH2232193.1;Parent=gene-ACYKK2_001590;Dbxref=NCBI_GP:HIH2232193.1;Name=HIH2232193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344118.1;locus_tag=ACYKK2_001590;product=chemotaxis protein;protein_id=HIH2232193.1;transl_table=11 DBLQKW010000049.1 tpg gene 739 1992 . + . ID=gene-ACYKK2_001591;Name=ACYKK2_001591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001591 DBLQKW010000049.1 Protein Homology CDS 739 1992 . + 0 ID=cds-HIH2232194.1;Parent=gene-ACYKK2_001591;Dbxref=NCBI_GP:HIH2232194.1;Name=HIH2232194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344119.1;locus_tag=ACYKK2_001591;product=peptidase U32 family protein;protein_id=HIH2232194.1;transl_table=11 DBLQKW010000049.1 tpg gene 1993 2487 . + . ID=gene-ACYKK2_001592;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=ACYKK2_001592 DBLQKW010000049.1 Protein Homology CDS 1993 2487 . + 0 ID=cds-HIH2232195.1;Parent=gene-ACYKK2_001592;Dbxref=NCBI_GP:HIH2232195.1;Name=HIH2232195.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344120.1;locus_tag=ACYKK2_001592;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=HIH2232195.1;transl_table=11 DBLQKW010000049.1 tpg gene 2497 3033 . + . ID=gene-ACYKK2_001593;Name=ACYKK2_001593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001593 DBLQKW010000049.1 Protein Homology CDS 2497 3033 . + 0 ID=cds-HIH2232196.1;Parent=gene-ACYKK2_001593;Dbxref=NCBI_GP:HIH2232196.1;Name=HIH2232196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344121.1;locus_tag=ACYKK2_001593;product=DUF3972 domain-containing protein;protein_id=HIH2232196.1;transl_table=11 DBLQKW010000049.1 tpg gene 3045 3908 . + . ID=gene-ACYKK2_001594;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=ACYKK2_001594 DBLQKW010000049.1 Protein Homology CDS 3045 3908 . + 0 ID=cds-HIH2232197.1;Parent=gene-ACYKK2_001594;Dbxref=NCBI_GP:HIH2232197.1;Name=HIH2232197.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344122.1;locus_tag=ACYKK2_001594;product=glycine--tRNA ligase subunit alpha;protein_id=HIH2232197.1;transl_table=11 DBLQKW010000049.1 tpg gene 3895 4620 . + . ID=gene-ACYKK2_001595;Name=ACYKK2_001595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001595 DBLQKW010000049.1 Protein Homology CDS 3895 4620 . + 0 ID=cds-HIH2232198.1;Parent=gene-ACYKK2_001595;Dbxref=NCBI_GP:HIH2232198.1;Name=HIH2232198.1;Ontology_term=GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344123.1;locus_tag=ACYKK2_001595;product=Nif3-like dinuclear metal center hexameric protein;protein_id=HIH2232198.1;transl_table=11 DBLQKW010000049.1 tpg gene 4630 5346 . + . ID=gene-ACYKK2_001596;Name=ACYKK2_001596;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001596 DBLQKW010000049.1 Protein Homology CDS 4630 5346 . + 0 ID=cds-HIH2232199.1;Parent=gene-ACYKK2_001596;Dbxref=NCBI_GP:HIH2232199.1;Name=HIH2232199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344124.1;locus_tag=ACYKK2_001596;product=zinc ribbon domain-containing protein;protein_id=HIH2232199.1;transl_table=11 DBLQKW010000049.1 tpg gene 5343 6500 . + . ID=gene-ACYKK2_001597;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=ACYKK2_001597 DBLQKW010000049.1 Protein Homology CDS 5343 6500 . + 0 ID=cds-HIH2232200.1;Parent=gene-ACYKK2_001597;Dbxref=NCBI_GP:HIH2232200.1;Name=HIH2232200.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344125.1;locus_tag=ACYKK2_001597;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=HIH2232200.1;transl_table=11 DBLQKW010000049.1 tpg gene 6481 7233 . + . ID=gene-ACYKK2_001598;Name=ACYKK2_001598;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001598 DBLQKW010000049.1 Protein Homology CDS 6481 7233 . + 0 ID=cds-HIH2232201.1;Parent=gene-ACYKK2_001598;Dbxref=NCBI_GP:HIH2232201.1;Name=HIH2232201.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344126.1;locus_tag=ACYKK2_001598;product=pseudouridine synthase;protein_id=HIH2232201.1;transl_table=11 DBLQKW010000049.1 tpg gene 7301 8638 . + . ID=gene-ACYKK2_001599;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=ACYKK2_001599 DBLQKW010000049.1 Protein Homology CDS 7301 8638 . + 0 ID=cds-HIH2232202.1;Parent=gene-ACYKK2_001599;Dbxref=NCBI_GP:HIH2232202.1;Name=HIH2232202.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344127.1;locus_tag=ACYKK2_001599;product=signal recognition particle protein;protein_id=HIH2232202.1;transl_table=11 DBLQKW010000049.1 tpg gene 8703 8930 . + . ID=gene-ACYKK2_001600;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=ACYKK2_001600 DBLQKW010000049.1 Protein Homology CDS 8703 8930 . + 0 ID=cds-HIH2232203.1;Parent=gene-ACYKK2_001600;Dbxref=NCBI_GP:HIH2232203.1;Name=HIH2232203.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344128.1;locus_tag=ACYKK2_001600;product=30S ribosomal protein S16;protein_id=HIH2232203.1;transl_table=11 DBLQKW010000049.1 tpg gene 8933 9175 . + . ID=gene-ACYKK2_001601;Name=ACYKK2_001601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001601 DBLQKW010000049.1 Protein Homology CDS 8933 9175 . + 0 ID=cds-HIH2232204.1;Parent=gene-ACYKK2_001601;Dbxref=NCBI_GP:HIH2232204.1;Name=HIH2232204.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344129.1;locus_tag=ACYKK2_001601;product=KH domain-containing protein;protein_id=HIH2232204.1;transl_table=11 DBLQKW010000049.1 tpg gene 9168 9707 . + . ID=gene-ACYKK2_001602;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=ACYKK2_001602 DBLQKW010000049.1 Protein Homology CDS 9168 9707 . + 0 ID=cds-HIH2232205.1;Parent=gene-ACYKK2_001602;Dbxref=NCBI_GP:HIH2232205.1;Name=HIH2232205.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344130.1;locus_tag=ACYKK2_001602;product=ribosome maturation factor RimM;protein_id=HIH2232205.1;transl_table=11 DBLQKW010000049.1 tpg gene 9704 10408 . + . ID=gene-ACYKK2_001603;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=ACYKK2_001603 DBLQKW010000049.1 Protein Homology CDS 9704 10408 . + 0 ID=cds-HIH2232206.1;Parent=gene-ACYKK2_001603;Dbxref=NCBI_GP:HIH2232206.1;Name=HIH2232206.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344131.1;locus_tag=ACYKK2_001603;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=HIH2232206.1;transl_table=11 DBLQKW010000049.1 tpg gene 10419 10775 . + . ID=gene-ACYKK2_001604;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=ACYKK2_001604 DBLQKW010000049.1 Protein Homology CDS 10419 10775 . + 0 ID=cds-HIH2232207.1;Parent=gene-ACYKK2_001604;Dbxref=NCBI_GP:HIH2232207.1;Name=HIH2232207.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344132.1;locus_tag=ACYKK2_001604;product=50S ribosomal protein L19;protein_id=HIH2232207.1;transl_table=11 ##sequence-region DBLQKW010000050.1 1 10646 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000050.1 tpg region 1 10646 . + . ID=DBLQKW010000050.1:1..10646;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000050.1 tpg gene 34 642 . + . ID=gene-ACYKK2_001605;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=ACYKK2_001605 DBLQKW010000050.1 Protein Homology CDS 34 642 . + 0 ID=cds-HIH2232208.1;Parent=gene-ACYKK2_001605;Dbxref=NCBI_GP:HIH2232208.1;Name=HIH2232208.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343795.1;locus_tag=ACYKK2_001605;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=HIH2232208.1;transl_table=11 DBLQKW010000050.1 tpg gene 627 944 . + . ID=gene-ACYKK2_001606;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=ACYKK2_001606 DBLQKW010000050.1 Protein Homology CDS 627 944 . + 0 ID=cds-HIH2232209.1;Parent=gene-ACYKK2_001606;Dbxref=NCBI_GP:HIH2232209.1;Name=HIH2232209.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343794.1;locus_tag=ACYKK2_001606;product=dihydroneopterin aldolase;protein_id=HIH2232209.1;transl_table=11 DBLQKW010000050.1 tpg gene 1023 1694 . + . ID=gene-ACYKK2_001607;Name=hsrA;gbkey=Gene;gene=hsrA;gene_biotype=protein_coding;locus_tag=ACYKK2_001607 DBLQKW010000050.1 Protein Homology CDS 1023 1694 . + 0 ID=cds-HIH2232210.1;Parent=gene-ACYKK2_001607;Dbxref=NCBI_GP:HIH2232210.1;Name=HIH2232210.1;gbkey=CDS;gene=hsrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343793.1;locus_tag=ACYKK2_001607;product=homeostatic response regulator transcription factor HsrA;protein_id=HIH2232210.1;transl_table=11 DBLQKW010000050.1 tpg gene 1807 2052 . + . ID=gene-ACYKK2_001608;Name=fdxB;gbkey=Gene;gene=fdxB;gene_biotype=protein_coding;locus_tag=ACYKK2_001608 DBLQKW010000050.1 Protein Homology CDS 1807 2052 . + 0 ID=cds-HIH2232211.1;Parent=gene-ACYKK2_001608;Dbxref=NCBI_GP:HIH2232211.1;Name=HIH2232211.1;gbkey=CDS;gene=fdxB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343792.1;locus_tag=ACYKK2_001608;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=HIH2232211.1;transl_table=11 DBLQKW010000050.1 tpg gene 2052 3512 . + . ID=gene-ACYKK2_001609;Name=ACYKK2_001609;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001609 DBLQKW010000050.1 Protein Homology CDS 2052 3512 . + 0 ID=cds-HIH2232212.1;Parent=gene-ACYKK2_001609;Dbxref=NCBI_GP:HIH2232212.1;Name=HIH2232212.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343791.1;locus_tag=ACYKK2_001609;product=Ppx/GppA phosphatase family protein;protein_id=HIH2232212.1;transl_table=11 DBLQKW010000050.1 tpg gene 3509 4306 . - . ID=gene-ACYKK2_001610;Name=ACYKK2_001610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001610 DBLQKW010000050.1 Protein Homology CDS 3509 4306 . - 0 ID=cds-HIH2232213.1;Parent=gene-ACYKK2_001610;Dbxref=NCBI_GP:HIH2232213.1;Name=HIH2232213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343790.1;locus_tag=ACYKK2_001610;product=hypothetical protein;protein_id=HIH2232213.1;transl_table=11 DBLQKW010000050.1 tpg gene 4307 4615 . - . ID=gene-ACYKK2_001611;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=ACYKK2_001611 DBLQKW010000050.1 Protein Homology CDS 4307 4615 . - 0 ID=cds-HIH2232214.1;Parent=gene-ACYKK2_001611;Dbxref=NCBI_GP:HIH2232214.1;Name=HIH2232214.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009425;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum basal body|0009425||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343789.1;locus_tag=ACYKK2_001611;product=flagellar motor switch protein FliN;protein_id=HIH2232214.1;transl_table=11 DBLQKW010000050.1 tpg gene 4615 5037 . - . ID=gene-ACYKK2_001612;Name=ACYKK2_001612;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001612 DBLQKW010000050.1 Protein Homology CDS 4615 5037 . - 0 ID=cds-HIH2232215.1;Parent=gene-ACYKK2_001612;Dbxref=NCBI_GP:HIH2232215.1;Name=HIH2232215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343788.1;locus_tag=ACYKK2_001612;product=chemotaxis protein CheX;protein_id=HIH2232215.1;transl_table=11 DBLQKW010000050.1 tpg gene 5108 5857 . - . ID=gene-ACYKK2_001613;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=ACYKK2_001613 DBLQKW010000050.1 Protein Homology CDS 5108 5857 . - 0 ID=cds-HIH2232216.1;Parent=gene-ACYKK2_001613;Dbxref=NCBI_GP:HIH2232216.1;Name=HIH2232216.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343787.1;locus_tag=ACYKK2_001613;product=tryptophan synthase subunit alpha;protein_id=HIH2232216.1;transl_table=11 DBLQKW010000050.1 tpg gene 5850 7028 . - . ID=gene-ACYKK2_001614;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=ACYKK2_001614 DBLQKW010000050.1 Protein Homology CDS 5850 7028 . - 0 ID=cds-HIH2232217.1;Parent=gene-ACYKK2_001614;Dbxref=NCBI_GP:HIH2232217.1;Name=HIH2232217.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343786.1;locus_tag=ACYKK2_001614;product=tryptophan synthase subunit beta;protein_id=HIH2232217.1;transl_table=11 DBLQKW010000050.1 tpg gene 7025 7624 . - . ID=gene-ACYKK2_001615;Name=trpF;gbkey=Gene;gene=trpF;gene_biotype=protein_coding;locus_tag=ACYKK2_001615 DBLQKW010000050.1 Protein Homology CDS 7025 7624 . - 0 ID=cds-HIH2232218.1;Parent=gene-ACYKK2_001615;Dbxref=NCBI_GP:HIH2232218.1;Name=HIH2232218.1;gbkey=CDS;gene=trpF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343785.1;locus_tag=ACYKK2_001615;product=phosphoribosylanthranilate isomerase;protein_id=HIH2232218.1;transl_table=11 DBLQKW010000050.1 tpg gene 7611 9212 . - . ID=gene-ACYKK2_001616;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=ACYKK2_001616 DBLQKW010000050.1 Protein Homology CDS 7611 9212 . - 0 ID=cds-HIH2232219.1;Parent=gene-ACYKK2_001616;Dbxref=NCBI_GP:HIH2232219.1;Name=HIH2232219.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343784.1;locus_tag=ACYKK2_001616;product=anthranilate phosphoribosyltransferase;protein_id=HIH2232219.1;transl_table=11 DBLQKW010000050.1 tpg gene 9209 10459 . - . ID=gene-ACYKK2_001617;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=ACYKK2_001617 DBLQKW010000050.1 Protein Homology CDS 9209 10459 . - 0 ID=cds-HIH2232220.1;Parent=gene-ACYKK2_001617;Dbxref=NCBI_GP:HIH2232220.1;Name=HIH2232220.1;Ontology_term=GO:0009058,GO:0046872;gbkey=CDS;gene=trpE;go_function=metal ion binding|0046872||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343783.1;locus_tag=ACYKK2_001617;product=anthranilate synthase component I family protein;protein_id=HIH2232220.1;transl_table=11 ##sequence-region DBLQKW010000051.1 1 9119 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000051.1 tpg region 1 9119 . + . ID=DBLQKW010000051.1:1..9119;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000051.1 tpg gene 113 1021 . - . ID=gene-ACYKK2_001618;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=ACYKK2_001618 DBLQKW010000051.1 Protein Homology CDS 113 1021 . - 0 ID=cds-HIH2232221.1;Parent=gene-ACYKK2_001618;Dbxref=NCBI_GP:HIH2232221.1;Name=HIH2232221.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002779653.1;locus_tag=ACYKK2_001618;product=type VI secretion system baseplate subunit TssG;protein_id=HIH2232221.1;transl_table=11 DBLQKW010000051.1 tpg gene 1018 2739 . - . ID=gene-ACYKK2_001619;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=ACYKK2_001619 DBLQKW010000051.1 Protein Homology CDS 1018 2739 . - 0 ID=cds-HIH2232222.1;Parent=gene-ACYKK2_001619;Dbxref=NCBI_GP:HIH2232222.1;Name=HIH2232222.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002779654.1;locus_tag=ACYKK2_001619;product=type VI secretion system baseplate subunit TssF;protein_id=HIH2232222.1;transl_table=11 DBLQKW010000051.1 tpg gene 2736 3128 . - . ID=gene-ACYKK2_001620;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=ACYKK2_001620 DBLQKW010000051.1 Protein Homology CDS 2736 3128 . - 0 ID=cds-HIH2232223.1;Parent=gene-ACYKK2_001620;Dbxref=NCBI_GP:HIH2232223.1;Name=HIH2232223.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002881831.1;locus_tag=ACYKK2_001620;product=type VI secretion system baseplate subunit TssE;protein_id=HIH2232223.1;transl_table=11 DBLQKW010000051.1 tpg gene 3131 4585 . - . ID=gene-ACYKK2_001621;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=ACYKK2_001621 DBLQKW010000051.1 Protein Homology CDS 3131 4585 . - 0 ID=cds-HIH2232224.1;Parent=gene-ACYKK2_001621;Dbxref=NCBI_GP:HIH2232224.1;Name=HIH2232224.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002790610.1;locus_tag=ACYKK2_001621;product=type VI secretion system contractile sheath large subunit;protein_id=HIH2232224.1;transl_table=11 DBLQKW010000051.1 tpg gene 4587 5072 . - . ID=gene-ACYKK2_001622;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=ACYKK2_001622 DBLQKW010000051.1 Protein Homology CDS 4587 5072 . - 0 ID=cds-HIH2232225.1;Parent=gene-ACYKK2_001622;Dbxref=NCBI_GP:HIH2232225.1;Name=HIH2232225.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002800584.1;locus_tag=ACYKK2_001622;product=type VI secretion system contractile sheath small subunit;protein_id=HIH2232225.1;transl_table=11 DBLQKW010000051.1 tpg gene 5141 6388 . - . ID=gene-ACYKK2_001623;Name=ACYKK2_001623;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001623 DBLQKW010000051.1 Protein Homology CDS 5141 6388 . - 0 ID=cds-HIH2232226.1;Parent=gene-ACYKK2_001623;Dbxref=NCBI_GP:HIH2232226.1;Name=HIH2232226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002834708.1;locus_tag=ACYKK2_001623;product=type VI secretion system domain-containing protein;protein_id=HIH2232226.1;transl_table=11 DBLQKW010000051.1 tpg gene 6514 6960 . + . ID=gene-ACYKK2_001624;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=ACYKK2_001624 DBLQKW010000051.1 Protein Homology CDS 6514 6960 . + 0 ID=cds-HIH2232227.1;Parent=gene-ACYKK2_001624;Dbxref=NCBI_GP:HIH2232227.1;Name=HIH2232227.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002779659.1;locus_tag=ACYKK2_001624;product=type VI secretion system lipoprotein TssJ;protein_id=HIH2232227.1;transl_table=11 DBLQKW010000051.1 tpg gene 6970 8367 . + . ID=gene-ACYKK2_001625;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=ACYKK2_001625 DBLQKW010000051.1 Protein Homology CDS 6970 8367 . + 0 ID=cds-HIH2232228.1;Parent=gene-ACYKK2_001625;Dbxref=NCBI_GP:HIH2232228.1;Name=HIH2232228.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002881836.1;locus_tag=ACYKK2_001625;product=type VI secretion system baseplate subunit TssK;protein_id=HIH2232228.1;transl_table=11 DBLQKW010000051.1 tpg gene 8364 9119 . + . ID=gene-ACYKK2_001626;Name=icmH;end_range=9119,.;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=ACYKK2_001626;partial=true DBLQKW010000051.1 Protein Homology CDS 8364 9119 . + 0 ID=cds-HIH2232229.1;Parent=gene-ACYKK2_001626;Dbxref=NCBI_GP:HIH2232229.1;Name=HIH2232229.1;end_range=9119,.;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002790607.1;locus_tag=ACYKK2_001626;partial=true;product=type IVB secretion system protein IcmH/DotU;protein_id=HIH2232229.1;transl_table=11 ##sequence-region DBLQKW010000052.1 1 9026 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000052.1 tpg region 1 9026 . + . ID=DBLQKW010000052.1:1..9026;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000052.1 tpg gene 9 1106 . + . ID=gene-ACYKK2_001627;Name=ACYKK2_001627;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001627 DBLQKW010000052.1 Protein Homology CDS 9 1106 . + 0 ID=cds-HIH2232230.1;Parent=gene-ACYKK2_001627;Dbxref=NCBI_GP:HIH2232230.1;Name=HIH2232230.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344394.1;locus_tag=ACYKK2_001627;product=YeiH family protein;protein_id=HIH2232230.1;transl_table=11 DBLQKW010000052.1 tpg gene 1201 1773 . + . ID=gene-ACYKK2_001628;Name=ACYKK2_001628;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001628 DBLQKW010000052.1 Protein Homology CDS 1201 1773 . + 0 ID=cds-HIH2232231.1;Parent=gene-ACYKK2_001628;Dbxref=NCBI_GP:HIH2232231.1;Name=HIH2232231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344393.1;locus_tag=ACYKK2_001628;product=hypothetical protein;protein_id=HIH2232231.1;transl_table=11 DBLQKW010000052.1 tpg gene 1789 2355 . - . ID=gene-ACYKK2_001629;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=ACYKK2_001629 DBLQKW010000052.1 Protein Homology CDS 1789 2355 . - 0 ID=cds-HIH2232232.1;Parent=gene-ACYKK2_001629;Dbxref=NCBI_GP:HIH2232232.1;Name=HIH2232232.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344392.1;locus_tag=ACYKK2_001629;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=HIH2232232.1;transl_table=11 DBLQKW010000052.1 tpg gene 2356 2916 . - . ID=gene-ACYKK2_001630;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=ACYKK2_001630 DBLQKW010000052.1 Protein Homology CDS 2356 2916 . - 0 ID=cds-HIH2232233.1;Parent=gene-ACYKK2_001630;Dbxref=NCBI_GP:HIH2232233.1;Name=HIH2232233.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344391.1;locus_tag=ACYKK2_001630;product=GTP cyclohydrolase II;protein_id=HIH2232233.1;transl_table=11 DBLQKW010000052.1 tpg gene 2974 3957 . + . ID=gene-ACYKK2_001631;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=ACYKK2_001631 DBLQKW010000052.1 Protein Homology CDS 2974 3957 . + 0 ID=cds-HIH2232234.1;Parent=gene-ACYKK2_001631;Dbxref=NCBI_GP:HIH2232234.1;Name=HIH2232234.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344390.1;locus_tag=ACYKK2_001631;product=porphobilinogen synthase;protein_id=HIH2232234.1;transl_table=11 DBLQKW010000052.1 tpg gene 3954 4874 . + . ID=gene-ACYKK2_001632;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=ACYKK2_001632 DBLQKW010000052.1 Protein Homology CDS 3954 4874 . + 0 ID=cds-HIH2232235.1;Parent=gene-ACYKK2_001632;Dbxref=NCBI_GP:HIH2232235.1;Name=HIH2232235.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344389.1;locus_tag=ACYKK2_001632;product=ornithine carbamoyltransferase;protein_id=HIH2232235.1;transl_table=11 DBLQKW010000052.1 tpg gene 4871 5362 . + . ID=gene-ACYKK2_001633;Name=ACYKK2_001633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001633 DBLQKW010000052.1 Protein Homology CDS 4871 5362 . + 0 ID=cds-HIH2232236.1;Parent=gene-ACYKK2_001633;Dbxref=NCBI_GP:HIH2232236.1;Name=HIH2232236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344388.1;locus_tag=ACYKK2_001633;product=DUF2603 domain-containing protein;protein_id=HIH2232236.1;transl_table=11 DBLQKW010000052.1 tpg gene 5349 6704 . + . ID=gene-ACYKK2_001634;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=ACYKK2_001634 DBLQKW010000052.1 Protein Homology CDS 5349 6704 . + 0 ID=cds-HIH2232237.1;Parent=gene-ACYKK2_001634;Dbxref=NCBI_GP:HIH2232237.1;Name=HIH2232237.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344387.1;locus_tag=ACYKK2_001634;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=HIH2232237.1;transl_table=11 DBLQKW010000052.1 tpg gene 6706 7971 . + . ID=gene-ACYKK2_001635;Name=ACYKK2_001635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001635 DBLQKW010000052.1 Protein Homology CDS 6706 7971 . + 0 ID=cds-HIH2232238.1;Parent=gene-ACYKK2_001635;Dbxref=NCBI_GP:HIH2232238.1;Name=HIH2232238.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344386.1;locus_tag=ACYKK2_001635;product=(Fe-S)-binding protein;protein_id=HIH2232238.1;transl_table=11 DBLQKW010000052.1 tpg gene 7968 8729 . + . ID=gene-ACYKK2_001636;Name=ACYKK2_001636;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001636 DBLQKW010000052.1 Protein Homology CDS 7968 8729 . + 0 ID=cds-HIH2232239.1;Parent=gene-ACYKK2_001636;Dbxref=NCBI_GP:HIH2232239.1;Name=HIH2232239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344385.1;locus_tag=ACYKK2_001636;product=DUF5416 family protein;protein_id=HIH2232239.1;transl_table=11 DBLQKW010000052.1 tpg gene 8732 8938 . - . ID=gene-ACYKK2_001637;Name=ACYKK2_001637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001637 DBLQKW010000052.1 Protein Homology CDS 8732 8938 . - 0 ID=cds-HIH2232240.1;Parent=gene-ACYKK2_001637;Dbxref=NCBI_GP:HIH2232240.1;Name=HIH2232240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344384.1;locus_tag=ACYKK2_001637;product=hypothetical protein;protein_id=HIH2232240.1;transl_table=11 ##sequence-region DBLQKW010000053.1 1 8976 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000053.1 tpg region 1 8976 . + . ID=DBLQKW010000053.1:1..8976;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000053.1 tpg gene 27 701 . - . ID=gene-ACYKK2_001638;Name=hddC;gbkey=Gene;gene=hddC;gene_biotype=protein_coding;locus_tag=ACYKK2_001638 DBLQKW010000053.1 Protein Homology CDS 27 701 . - 0 ID=cds-HIH2232241.1;Parent=gene-ACYKK2_001638;Dbxref=NCBI_GP:HIH2232241.1;Name=HIH2232241.1;Ontology_term=GO:0009298,GO:0045227,GO:0005525,GO:0070568;gbkey=CDS;gene=hddC;go_function=GTP binding|0005525||IEA,guanylyltransferase activity|0070568||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA,capsule polysaccharide biosynthetic process|0045227||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002872758.1;locus_tag=ACYKK2_001638;product=D-glycero-D-manno-heptose 1-phosphate guanosyltransferase;protein_id=HIH2232241.1;transl_table=11 DBLQKW010000053.1 tpg gene 689 1294 . - . ID=gene-ACYKK2_001639;Name=gmhA2;gbkey=Gene;gene=gmhA2;gene_biotype=protein_coding;locus_tag=ACYKK2_001639 DBLQKW010000053.1 Protein Homology CDS 689 1294 . - 0 ID=cds-HIH2232242.1;Parent=gene-ACYKK2_001639;Dbxref=NCBI_GP:HIH2232242.1;Name=HIH2232242.1;gbkey=CDS;gene=gmhA2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344807.1;locus_tag=ACYKK2_001639;product=D-sedoheptulose 7-phosphate isomerase;protein_id=HIH2232242.1;transl_table=11 DBLQKW010000053.1 tpg gene 1300 2388 . - . ID=gene-ACYKK2_001640;Name=ACYKK2_001640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001640 DBLQKW010000053.1 Protein Homology CDS 1300 2388 . - 0 ID=cds-HIH2232243.1;Parent=gene-ACYKK2_001640;Dbxref=NCBI_GP:HIH2232243.1;Name=HIH2232243.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: protein motif:HMM:NF024880.6;locus_tag=ACYKK2_001640;product=class I SAM-dependent methyltransferase;protein_id=HIH2232243.1;transl_table=11 DBLQKW010000053.1 tpg gene 2512 3531 . - . ID=gene-ACYKK2_001641;Name=hddA;gbkey=Gene;gene=hddA;gene_biotype=protein_coding;locus_tag=ACYKK2_001641 DBLQKW010000053.1 Protein Homology CDS 2512 3531 . - 0 ID=cds-HIH2232244.1;Parent=gene-ACYKK2_001641;Dbxref=NCBI_GP:HIH2232244.1;Name=HIH2232244.1;Ontology_term=GO:0006012,GO:2001060,GO:0004335,GO:0005524;gbkey=CDS;gene=hddA;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,D-glycero-D-manno-heptose 7-phosphate metabolic process|2001060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344808.1;locus_tag=ACYKK2_001641;product=D-glycero-D-manno-heptose 7-phosphate kinase;protein_id=HIH2232244.1;transl_table=11 DBLQKW010000053.1 tpg gene 3606 4544 . - . ID=gene-ACYKK2_001642;Name=ACYKK2_001642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001642 DBLQKW010000053.1 Protein Homology CDS 3606 4544 . - 0 ID=cds-HIH2232245.1;Parent=gene-ACYKK2_001642;Dbxref=NCBI_GP:HIH2232245.1;Name=HIH2232245.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002934348.1;locus_tag=ACYKK2_001642;product=NAD-dependent epimerase/dehydratase family protein;protein_id=HIH2232245.1;transl_table=11 DBLQKW010000053.1 tpg gene 4568 5602 . - . ID=gene-ACYKK2_001643;Name=ACYKK2_001643;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001643 DBLQKW010000053.1 Protein Homology CDS 4568 5602 . - 0 ID=cds-HIH2232246.1;Parent=gene-ACYKK2_001643;Dbxref=NCBI_GP:HIH2232246.1;Name=HIH2232246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002830388.1;locus_tag=ACYKK2_001643;product=GDP-mannose 4%2C6-dehydratase;protein_id=HIH2232246.1;transl_table=11 DBLQKW010000053.1 tpg gene 5611 6651 . - . ID=gene-ACYKK2_001644;Name=ACYKK2_001644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001644 DBLQKW010000053.1 Protein Homology CDS 5611 6651 . - 0 ID=cds-HIH2232247.1;Parent=gene-ACYKK2_001644;Dbxref=NCBI_GP:HIH2232247.1;Name=HIH2232247.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002923011.1;locus_tag=ACYKK2_001644;product=NAD-dependent epimerase/dehydratase family protein;protein_id=HIH2232247.1;transl_table=11 DBLQKW010000053.1 tpg gene 6651 7196 . - . ID=gene-ACYKK2_001645;Name=ACYKK2_001645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001645 DBLQKW010000053.1 Protein Homology CDS 6651 7196 . - 0 ID=cds-HIH2232248.1;Parent=gene-ACYKK2_001645;Dbxref=NCBI_GP:HIH2232248.1;Name=HIH2232248.1;Ontology_term=GO:0016857;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002826217.1;locus_tag=ACYKK2_001645;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase family protein;protein_id=HIH2232248.1;transl_table=11 DBLQKW010000053.1 tpg gene 7196 8976 . - . ID=gene-ACYKK2_001646;Name=ACYKK2_001646;end_range=8976,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001646;partial=true DBLQKW010000053.1 GeneMarkS-2+ CDS 7196 8976 . - 2 ID=cds-HIH2232249.1;Parent=gene-ACYKK2_001646;Dbxref=NCBI_GP:HIH2232249.1;Name=HIH2232249.1;end_range=8976,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001646;partial=true;product=glycosyltransferase;protein_id=HIH2232249.1;transl_table=11 ##sequence-region DBLQKW010000054.1 1 7817 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000054.1 tpg region 1 7817 . + . ID=DBLQKW010000054.1:1..7817;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000054.1 tpg gene 45 1295 . - . ID=gene-ACYKK2_001647;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=ACYKK2_001647 DBLQKW010000054.1 Protein Homology CDS 45 1295 . - 0 ID=cds-HIH2232250.1;Parent=gene-ACYKK2_001647;Dbxref=NCBI_GP:HIH2232250.1;Name=HIH2232250.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344093.1;locus_tag=ACYKK2_001647;product=RNA polymerase factor sigma-54;protein_id=HIH2232250.1;transl_table=11 DBLQKW010000054.1 tpg gene 1295 2023 . - . ID=gene-ACYKK2_001648;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=ACYKK2_001648 DBLQKW010000054.1 Protein Homology CDS 1295 2023 . - 0 ID=cds-HIH2232251.1;Parent=gene-ACYKK2_001648;Dbxref=NCBI_GP:HIH2232251.1;Name=HIH2232251.1;Ontology_term=GO:0015920,GO:0015221,GO:0042626,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344092.1;locus_tag=ACYKK2_001648;product=LPS export ABC transporter ATP-binding protein;protein_id=HIH2232251.1;transl_table=11 DBLQKW010000054.1 tpg gene 2016 2423 . - . ID=gene-ACYKK2_001649;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=ACYKK2_001649 DBLQKW010000054.1 Protein Homology CDS 2016 2423 . - 0 ID=cds-HIH2232252.1;Parent=gene-ACYKK2_001649;Dbxref=NCBI_GP:HIH2232252.1;Name=HIH2232252.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344091.1;locus_tag=ACYKK2_001649;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=HIH2232252.1;transl_table=11 DBLQKW010000054.1 tpg gene 2420 2665 . - . ID=gene-ACYKK2_001650;Name=ACYKK2_001650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001650 DBLQKW010000054.1 Protein Homology CDS 2420 2665 . - 0 ID=cds-HIH2232253.1;Parent=gene-ACYKK2_001650;Dbxref=NCBI_GP:HIH2232253.1;Name=HIH2232253.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344090.1;locus_tag=ACYKK2_001650;product=RNA-binding S4 domain-containing protein;protein_id=HIH2232253.1;transl_table=11 DBLQKW010000054.1 tpg gene 2821 4041 . + . ID=gene-ACYKK2_001651;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=ACYKK2_001651 DBLQKW010000054.1 Protein Homology CDS 2821 4041 . + 0 ID=cds-HIH2232254.1;Parent=gene-ACYKK2_001651;Dbxref=NCBI_GP:HIH2232254.1;Name=HIH2232254.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344089.1;locus_tag=ACYKK2_001651;product=argininosuccinate synthase;protein_id=HIH2232254.1;transl_table=11 DBLQKW010000054.1 tpg gene 4054 4497 . + . ID=gene-ACYKK2_001652;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=ACYKK2_001652 DBLQKW010000054.1 Protein Homology CDS 4054 4497 . + 0 ID=cds-HIH2232255.1;Parent=gene-ACYKK2_001652;Dbxref=NCBI_GP:HIH2232255.1;Name=HIH2232255.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344088.1;locus_tag=ACYKK2_001652;product=50S ribosomal protein L9;protein_id=HIH2232255.1;transl_table=11 DBLQKW010000054.1 tpg gene 4497 5039 . + . ID=gene-ACYKK2_001653;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=ACYKK2_001653 DBLQKW010000054.1 Protein Homology CDS 4497 5039 . + 0 ID=cds-HIH2232256.1;Parent=gene-ACYKK2_001653;Dbxref=NCBI_GP:HIH2232256.1;Name=HIH2232256.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344087.1;locus_tag=ACYKK2_001653;product=ATP-dependent protease subunit HslV;protein_id=HIH2232256.1;transl_table=11 DBLQKW010000054.1 tpg gene 5036 6355 . + . ID=gene-ACYKK2_001654;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=ACYKK2_001654 DBLQKW010000054.1 Protein Homology CDS 5036 6355 . + 0 ID=cds-HIH2232257.1;Parent=gene-ACYKK2_001654;Dbxref=NCBI_GP:HIH2232257.1;Name=HIH2232257.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344086.1;locus_tag=ACYKK2_001654;product=ATP-dependent protease ATPase subunit HslU;protein_id=HIH2232257.1;transl_table=11 DBLQKW010000054.1 tpg gene 6352 7227 . + . ID=gene-ACYKK2_001655;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=ACYKK2_001655 DBLQKW010000054.1 Protein Homology CDS 6352 7227 . + 0 ID=cds-HIH2232258.1;Parent=gene-ACYKK2_001655;Dbxref=NCBI_GP:HIH2232258.1;Name=HIH2232258.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344085.1;locus_tag=ACYKK2_001655;product=GTPase Era;protein_id=HIH2232258.1;transl_table=11 DBLQKW010000054.1 tpg gene 7214 7817 . + . ID=gene-ACYKK2_001656;Name=ACYKK2_001656;end_range=7817,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001656;partial=true DBLQKW010000054.1 Protein Homology CDS 7214 7817 . + 0 ID=cds-HIH2232259.1;Parent=gene-ACYKK2_001656;Dbxref=NCBI_GP:HIH2232259.1;Name=HIH2232259.1;end_range=7817,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344084.1;locus_tag=ACYKK2_001656;partial=true;product=hypothetical protein;protein_id=HIH2232259.1;transl_table=11 ##sequence-region DBLQKW010000055.1 1 7714 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000055.1 tpg region 1 7714 . + . ID=DBLQKW010000055.1:1..7714;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000055.1 tpg gene 30 479 . + . ID=gene-ACYKK2_001657;Name=ACYKK2_001657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001657 DBLQKW010000055.1 Protein Homology CDS 30 479 . + 0 ID=cds-HIH2232260.1;Parent=gene-ACYKK2_001657;Dbxref=NCBI_GP:HIH2232260.1;Name=HIH2232260.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344906.1;locus_tag=ACYKK2_001657;product=Dps family protein;protein_id=HIH2232260.1;transl_table=11 DBLQKW010000055.1 tpg gene 544 1581 . + . ID=gene-ACYKK2_001658;Name=ACYKK2_001658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001658 DBLQKW010000055.1 Protein Homology CDS 544 1581 . + 0 ID=cds-HIH2232261.1;Parent=gene-ACYKK2_001658;Dbxref=NCBI_GP:HIH2232261.1;Name=HIH2232261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344905.1;locus_tag=ACYKK2_001658;product=DUF4143 domain-containing protein;protein_id=HIH2232261.1;transl_table=11 DBLQKW010000055.1 tpg gene 1578 2309 . - . ID=gene-ACYKK2_001659;Name=ACYKK2_001659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001659 DBLQKW010000055.1 Protein Homology CDS 1578 2309 . - 0 ID=cds-HIH2232262.1;Parent=gene-ACYKK2_001659;Dbxref=NCBI_GP:HIH2232262.1;Name=HIH2232262.1;Ontology_term=GO:0004040;gbkey=CDS;go_function=amidase activity|0004040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344904.1;locus_tag=ACYKK2_001659;product=glucosaminidase domain-containing protein;protein_id=HIH2232262.1;transl_table=11 DBLQKW010000055.1 tpg gene 2284 3033 . - . ID=gene-ACYKK2_001660;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=ACYKK2_001660 DBLQKW010000055.1 Protein Homology CDS 2284 3033 . - 0 ID=cds-HIH2232263.1;Parent=gene-ACYKK2_001660;Dbxref=NCBI_GP:HIH2232263.1;Name=HIH2232263.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002855997.1;locus_tag=ACYKK2_001660;product=diaminopimelate epimerase;protein_id=HIH2232263.1;transl_table=11 DBLQKW010000055.1 tpg gene 3030 3635 . - . ID=gene-ACYKK2_001661;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=ACYKK2_001661 DBLQKW010000055.1 Protein Homology CDS 3030 3635 . - 0 ID=cds-HIH2232264.1;Parent=gene-ACYKK2_001661;Dbxref=NCBI_GP:HIH2232264.1;Name=HIH2232264.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344902.1;locus_tag=ACYKK2_001661;product=dephospho-CoA kinase;protein_id=HIH2232264.1;transl_table=11 DBLQKW010000055.1 tpg gene 3696 4685 . + . ID=gene-ACYKK2_001662;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=ACYKK2_001662 DBLQKW010000055.1 Protein Homology CDS 3696 4685 . + 0 ID=cds-HIH2232265.1;Parent=gene-ACYKK2_001662;Dbxref=NCBI_GP:HIH2232265.1;Name=HIH2232265.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344901.1;locus_tag=ACYKK2_001662;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=HIH2232265.1;transl_table=11 DBLQKW010000055.1 tpg gene 4896 5237 . + . ID=gene-ACYKK2_001663;Name=ACYKK2_001663;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001663 DBLQKW010000055.1 GeneMarkS-2+ CDS 4896 5237 . + 0 ID=cds-HIH2232266.1;Parent=gene-ACYKK2_001663;Dbxref=NCBI_GP:HIH2232266.1;Name=HIH2232266.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001663;product=hypothetical protein;protein_id=HIH2232266.1;transl_table=11 DBLQKW010000055.1 tpg pseudogene 5255 5543 . + . ID=gene-ACYKK2_001664;Name=ACYKK2_001664;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001664;pseudo=true DBLQKW010000055.1 Protein Homology CDS 5255 5543 . + 0 ID=cds-ACYKK2_001664;Parent=gene-ACYKK2_001664;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002779492.1;locus_tag=ACYKK2_001664;product=hypothetical protein;pseudo=true;transl_table=11 DBLQKW010000055.1 tpg pseudogene 6580 7698 . - . ID=gene-ACYKK2_001665;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=pseudogene;locus_tag=ACYKK2_001665;pseudo=true DBLQKW010000055.1 Protein Homology CDS 6580 7698 . - 0 ID=cds-ACYKK2_001665;Parent=gene-ACYKK2_001665;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0015740,GO:0015556,GO:0016020;gbkey=CDS;gene=dcuC;go_component=membrane|0016020||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002831351.1;locus_tag=ACYKK2_001665;product=C4-dicarboxylate transporter DcuC;pseudo=true;transl_table=11 ##sequence-region DBLQKW010000056.1 1 7447 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000056.1 tpg region 1 7447 . + . ID=DBLQKW010000056.1:1..7447;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000056.1 tpg gene 1 874 . + . ID=gene-ACYKK2_001666;Name=ACYKK2_001666;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001666;partial=true;start_range=.,1 DBLQKW010000056.1 Protein Homology CDS 1 874 . + 1 ID=cds-HIH2232267.1;Parent=gene-ACYKK2_001666;Dbxref=NCBI_GP:HIH2232267.1;Name=HIH2232267.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343493.1;locus_tag=ACYKK2_001666;partial=true;product=fumarylacetoacetate hydrolase family protein;protein_id=HIH2232267.1;start_range=.,1;transl_table=11 DBLQKW010000056.1 tpg gene 938 1852 . + . ID=gene-ACYKK2_001667;Name=ACYKK2_001667;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001667 DBLQKW010000056.1 Protein Homology CDS 938 1852 . + 0 ID=cds-HIH2232268.1;Parent=gene-ACYKK2_001667;Dbxref=NCBI_GP:HIH2232268.1;Name=HIH2232268.1;Ontology_term=GO:0004130,GO:0016491,GO:0020037;gbkey=CDS;go_function=cytochrome-c peroxidase activity|0004130||IEA,oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343492.1;locus_tag=ACYKK2_001667;product=cytochrome-c peroxidase;protein_id=HIH2232268.1;transl_table=11 DBLQKW010000056.1 tpg gene 1842 3620 . + . ID=gene-ACYKK2_001668;Name=ACYKK2_001668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001668 DBLQKW010000056.1 Protein Homology CDS 1842 3620 . + 0 ID=cds-HIH2232269.1;Parent=gene-ACYKK2_001668;Dbxref=NCBI_GP:HIH2232269.1;Name=HIH2232269.1;Ontology_term=GO:0006935;gbkey=CDS;go_process=chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343491.1;locus_tag=ACYKK2_001668;product=methyl-accepting chemotaxis protein;protein_id=HIH2232269.1;transl_table=11 DBLQKW010000056.1 tpg gene 3726 3893 . + . ID=gene-ACYKK2_001669;Name=dba;gbkey=Gene;gene=dba;gene_biotype=protein_coding;locus_tag=ACYKK2_001669 DBLQKW010000056.1 Protein Homology CDS 3726 3893 . + 0 ID=cds-HIH2232270.1;Parent=gene-ACYKK2_001669;Dbxref=NCBI_GP:HIH2232270.1;Name=HIH2232270.1;gbkey=CDS;gene=dba;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343490.1;locus_tag=ACYKK2_001669;product=disulfide bond formation protein Dba;protein_id=HIH2232270.1;transl_table=11 DBLQKW010000056.1 tpg gene 3905 5431 . + . ID=gene-ACYKK2_001670;Name=dsbI;gbkey=Gene;gene=dsbI;gene_biotype=protein_coding;locus_tag=ACYKK2_001670 DBLQKW010000056.1 Protein Homology CDS 3905 5431 . + 0 ID=cds-HIH2232271.1;Parent=gene-ACYKK2_001670;Dbxref=NCBI_GP:HIH2232271.1;Name=HIH2232271.1;Ontology_term=GO:0006457,GO:0015035;gbkey=CDS;gene=dsbI;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343489.1;locus_tag=ACYKK2_001670;product=disulfide bond formation protein DsbI;protein_id=HIH2232271.1;transl_table=11 DBLQKW010000056.1 tpg gene 5452 6126 . - . ID=gene-ACYKK2_001671;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=ACYKK2_001671 DBLQKW010000056.1 Protein Homology CDS 5452 6126 . - 0 ID=cds-HIH2232272.1;Parent=gene-ACYKK2_001671;Dbxref=NCBI_GP:HIH2232272.1;Name=HIH2232272.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343488.1;locus_tag=ACYKK2_001671;product=7-cyano-7-deazaguanine synthase QueC;protein_id=HIH2232272.1;transl_table=11 DBLQKW010000056.1 tpg gene 6203 7429 . + . ID=gene-ACYKK2_001672;Name=ACYKK2_001672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001672 DBLQKW010000056.1 Protein Homology CDS 6203 7429 . + 0 ID=cds-HIH2232273.1;Parent=gene-ACYKK2_001672;Dbxref=NCBI_GP:HIH2232273.1;Name=HIH2232273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343487.1;locus_tag=ACYKK2_001672;product=HD domain-containing protein;protein_id=HIH2232273.1;transl_table=11 ##sequence-region DBLQKW010000057.1 1 7192 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000057.1 tpg region 1 7192 . + . ID=DBLQKW010000057.1:1..7192;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000057.1 tpg gene 45 329 . + . ID=gene-ACYKK2_001673;Name=ACYKK2_001673;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001673 DBLQKW010000057.1 Protein Homology CDS 45 329 . + 0 ID=cds-HIH2232274.1;Parent=gene-ACYKK2_001673;Dbxref=NCBI_GP:HIH2232274.1;Name=HIH2232274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343771.1;locus_tag=ACYKK2_001673;product=DUF362 domain-containing protein;protein_id=HIH2232274.1;transl_table=11 DBLQKW010000057.1 tpg gene 442 855 . + . ID=gene-ACYKK2_001674;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=ACYKK2_001674 DBLQKW010000057.1 Protein Homology CDS 442 855 . + 0 ID=cds-HIH2232275.1;Parent=gene-ACYKK2_001674;Dbxref=NCBI_GP:HIH2232275.1;Name=HIH2232275.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343770.1;locus_tag=ACYKK2_001674;product=nucleoside-diphosphate kinase;protein_id=HIH2232275.1;transl_table=11 DBLQKW010000057.1 tpg gene 856 1209 . + . ID=gene-ACYKK2_001675;Name=ACYKK2_001675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001675 DBLQKW010000057.1 Protein Homology CDS 856 1209 . + 0 ID=cds-HIH2232276.1;Parent=gene-ACYKK2_001675;Dbxref=NCBI_GP:HIH2232276.1;Name=HIH2232276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343769.1;locus_tag=ACYKK2_001675;product=hypothetical protein;protein_id=HIH2232276.1;transl_table=11 DBLQKW010000057.1 tpg gene 1233 1379 . + . ID=gene-ACYKK2_001676;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=ACYKK2_001676 DBLQKW010000057.1 Protein Homology CDS 1233 1379 . + 0 ID=cds-HIH2232277.1;Parent=gene-ACYKK2_001676;Dbxref=NCBI_GP:HIH2232277.1;Name=HIH2232277.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343768.1;locus_tag=ACYKK2_001676;product=50S ribosomal protein L32;protein_id=HIH2232277.1;transl_table=11 DBLQKW010000057.1 tpg gene 1385 2371 . + . ID=gene-ACYKK2_001677;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=ACYKK2_001677 DBLQKW010000057.1 Protein Homology CDS 1385 2371 . + 0 ID=cds-HIH2232278.1;Parent=gene-ACYKK2_001677;Dbxref=NCBI_GP:HIH2232278.1;Name=HIH2232278.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343767.1;locus_tag=ACYKK2_001677;product=phosphate acyltransferase PlsX;protein_id=HIH2232278.1;transl_table=11 DBLQKW010000057.1 tpg gene 2364 3338 . + . ID=gene-ACYKK2_001678;Name=ACYKK2_001678;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001678 DBLQKW010000057.1 Protein Homology CDS 2364 3338 . + 0 ID=cds-HIH2232279.1;Parent=gene-ACYKK2_001678;Dbxref=NCBI_GP:HIH2232279.1;Name=HIH2232279.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343766.1;locus_tag=ACYKK2_001678;product=beta-ketoacyl-ACP synthase III;protein_id=HIH2232279.1;transl_table=11 DBLQKW010000057.1 tpg gene 3335 3685 . - . ID=gene-ACYKK2_001679;Name=ACYKK2_001679;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001679 DBLQKW010000057.1 Protein Homology CDS 3335 3685 . - 0 ID=cds-HIH2232280.1;Parent=gene-ACYKK2_001679;Dbxref=NCBI_GP:HIH2232280.1;Name=HIH2232280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343765.1;locus_tag=ACYKK2_001679;product=RidA family protein;protein_id=HIH2232280.1;transl_table=11 DBLQKW010000057.1 tpg gene 3682 4758 . - . ID=gene-ACYKK2_001680;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=ACYKK2_001680 DBLQKW010000057.1 Protein Homology CDS 3682 4758 . - 0 ID=cds-HIH2232281.1;Parent=gene-ACYKK2_001680;Dbxref=NCBI_GP:HIH2232281.1;Name=HIH2232281.1;Ontology_term=GO:0006564,GO:0004648;gbkey=CDS;gene=serC;go_function=O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343764.1;locus_tag=ACYKK2_001680;product=phosphoserine transaminase;protein_id=HIH2232281.1;transl_table=11 DBLQKW010000057.1 tpg gene 4768 5931 . - . ID=gene-ACYKK2_001681;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=ACYKK2_001681 DBLQKW010000057.1 Protein Homology CDS 4768 5931 . - 0 ID=cds-HIH2232282.1;Parent=gene-ACYKK2_001681;Dbxref=NCBI_GP:HIH2232282.1;Name=HIH2232282.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343763.1;locus_tag=ACYKK2_001681;product=exodeoxyribonuclease VII large subunit;protein_id=HIH2232282.1;transl_table=11 DBLQKW010000057.1 tpg gene 5928 6635 . - . ID=gene-ACYKK2_001682;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=ACYKK2_001682 DBLQKW010000057.1 Protein Homology CDS 5928 6635 . - 0 ID=cds-HIH2232283.1;Parent=gene-ACYKK2_001682;Dbxref=NCBI_GP:HIH2232283.1;Name=HIH2232283.1;Ontology_term=GO:0042372,GO:0052624;gbkey=CDS;gene=ubiE;go_function=2-phytyl-1%2C4-naphthoquinone methyltransferase activity|0052624||IEA;go_process=phylloquinone biosynthetic process|0042372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343762.1;locus_tag=ACYKK2_001682;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=HIH2232283.1;transl_table=11 DBLQKW010000057.1 tpg gene 6638 7192 . - . ID=gene-ACYKK2_001683;Name=ACYKK2_001683;end_range=7192,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001683;partial=true DBLQKW010000057.1 Protein Homology CDS 6638 7192 . - 0 ID=cds-HIH2232284.1;Parent=gene-ACYKK2_001683;Dbxref=NCBI_GP:HIH2232284.1;Name=HIH2232284.1;end_range=7192,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343761.1;locus_tag=ACYKK2_001683;partial=true;product=hypothetical protein;protein_id=HIH2232284.1;transl_table=11 ##sequence-region DBLQKW010000058.1 1 6356 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000058.1 tpg region 1 6356 . + . ID=DBLQKW010000058.1:1..6356;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000058.1 tpg gene 69 1073 . + . ID=gene-ACYKK2_001684;Name=ACYKK2_001684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001684 DBLQKW010000058.1 Protein Homology CDS 69 1073 . + 0 ID=cds-HIH2232285.1;Parent=gene-ACYKK2_001684;Dbxref=NCBI_GP:HIH2232285.1;Name=HIH2232285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343633.1;locus_tag=ACYKK2_001684;product=Fe(3+) ABC transporter substrate-binding protein;protein_id=HIH2232285.1;transl_table=11 DBLQKW010000058.1 tpg gene 1073 2689 . + . ID=gene-ACYKK2_001685;Name=ACYKK2_001685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001685 DBLQKW010000058.1 Protein Homology CDS 1073 2689 . + 0 ID=cds-HIH2232286.1;Parent=gene-ACYKK2_001685;Dbxref=NCBI_GP:HIH2232286.1;Name=HIH2232286.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343632.1;locus_tag=ACYKK2_001685;product=ABC transporter permease;protein_id=HIH2232286.1;transl_table=11 DBLQKW010000058.1 tpg gene 2673 3581 . + . ID=gene-ACYKK2_001686;Name=ACYKK2_001686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001686 DBLQKW010000058.1 Protein Homology CDS 2673 3581 . + 0 ID=cds-HIH2232287.1;Parent=gene-ACYKK2_001686;Dbxref=NCBI_GP:HIH2232287.1;Name=HIH2232287.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343631.1;locus_tag=ACYKK2_001686;product=ABC transporter ATP-binding protein;protein_id=HIH2232287.1;transl_table=11 DBLQKW010000058.1 tpg gene 3617 4822 . + . ID=gene-ACYKK2_001687;Name=ACYKK2_001687;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001687 DBLQKW010000058.1 Protein Homology CDS 3617 4822 . + 0 ID=cds-HIH2232288.1;Parent=gene-ACYKK2_001687;Dbxref=NCBI_GP:HIH2232288.1;Name=HIH2232288.1;Ontology_term=GO:0009085,GO:0016646,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-NH group of donors%2C NAD or NADP as acceptor|0016646||IEA,NAD+ binding|0070403||IEA;go_process=lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343630.1;locus_tag=ACYKK2_001687;product=saccharopine dehydrogenase family protein;protein_id=HIH2232288.1;transl_table=11 DBLQKW010000058.1 tpg gene 4835 5197 . - . ID=gene-ACYKK2_001688;Name=ACYKK2_001688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001688 DBLQKW010000058.1 Protein Homology CDS 4835 5197 . - 0 ID=cds-HIH2232289.1;Parent=gene-ACYKK2_001688;Dbxref=NCBI_GP:HIH2232289.1;Name=HIH2232289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002816314.1;locus_tag=ACYKK2_001688;product=methyltransferase;protein_id=HIH2232289.1;transl_table=11 DBLQKW010000058.1 tpg gene 5307 5525 . - . ID=gene-ACYKK2_001689;Name=ACYKK2_001689;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001689 DBLQKW010000058.1 Protein Homology CDS 5307 5525 . - 0 ID=cds-HIH2232290.1;Parent=gene-ACYKK2_001689;Dbxref=NCBI_GP:HIH2232290.1;Name=HIH2232290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002862379.1;locus_tag=ACYKK2_001689;product=hypothetical protein;protein_id=HIH2232290.1;transl_table=11 DBLQKW010000058.1 tpg gene 5594 6256 . - . ID=gene-ACYKK2_001690;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=ACYKK2_001690 DBLQKW010000058.1 Protein Homology CDS 5594 6256 . - 0 ID=cds-HIH2232291.1;Parent=gene-ACYKK2_001690;Dbxref=NCBI_GP:HIH2232291.1;Name=HIH2232291.1;gbkey=CDS;gene=sodB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343628.1;locus_tag=ACYKK2_001690;product=superoxide dismutase [Fe];protein_id=HIH2232291.1;transl_table=11 ##sequence-region DBLQKW010000059.1 1 6314 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000059.1 tpg region 1 6314 . + . ID=DBLQKW010000059.1:1..6314;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000059.1 tpg gene 1 209 . + . ID=gene-ACYKK2_001691;Name=ACYKK2_001691;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001691;partial=true;start_range=.,1 DBLQKW010000059.1 Protein Homology CDS 1 209 . + 2 ID=cds-HIH2232292.1;Parent=gene-ACYKK2_001691;Dbxref=NCBI_GP:HIH2232292.1;Name=HIH2232292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002790984.1;locus_tag=ACYKK2_001691;partial=true;product=hypothetical protein;protein_id=HIH2232292.1;start_range=.,1;transl_table=11 DBLQKW010000059.1 tpg gene 879 2597 . + . ID=gene-ACYKK2_001692;Name=ACYKK2_001692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001692 DBLQKW010000059.1 Protein Homology CDS 879 2597 . + 0 ID=cds-HIH2232293.1;Parent=gene-ACYKK2_001692;Dbxref=NCBI_GP:HIH2232293.1;Name=HIH2232293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004311681.1;locus_tag=ACYKK2_001692;product=conjugal transfer protein TraG N-terminal domain-containing protein;protein_id=HIH2232293.1;transl_table=11 DBLQKW010000059.1 tpg gene 2781 2993 . + . ID=gene-ACYKK2_001693;Name=ACYKK2_001693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001693 DBLQKW010000059.1 Protein Homology CDS 2781 2993 . + 0 ID=cds-HIH2232294.1;Parent=gene-ACYKK2_001693;Dbxref=NCBI_GP:HIH2232294.1;Name=HIH2232294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002870218.1;locus_tag=ACYKK2_001693;product=hypothetical protein;protein_id=HIH2232294.1;transl_table=11 DBLQKW010000059.1 tpg gene 3009 3185 . + . ID=gene-ACYKK2_001694;Name=ACYKK2_001694;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001694 DBLQKW010000059.1 GeneMarkS-2+ CDS 3009 3185 . + 0 ID=cds-HIH2232295.1;Parent=gene-ACYKK2_001694;Dbxref=NCBI_GP:HIH2232295.1;Name=HIH2232295.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001694;product=hypothetical protein;protein_id=HIH2232295.1;transl_table=11 DBLQKW010000059.1 tpg gene 3187 3480 . + . ID=gene-ACYKK2_001695;Name=ACYKK2_001695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001695 DBLQKW010000059.1 GeneMarkS-2+ CDS 3187 3480 . + 0 ID=cds-HIH2232296.1;Parent=gene-ACYKK2_001695;Dbxref=NCBI_GP:HIH2232296.1;Name=HIH2232296.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001695;product=hypothetical protein;protein_id=HIH2232296.1;transl_table=11 DBLQKW010000059.1 tpg gene 3557 3715 . + . ID=gene-ACYKK2_001696;Name=ACYKK2_001696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001696 DBLQKW010000059.1 GeneMarkS-2+ CDS 3557 3715 . + 0 ID=cds-HIH2232297.1;Parent=gene-ACYKK2_001696;Dbxref=NCBI_GP:HIH2232297.1;Name=HIH2232297.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001696;product=hypothetical protein;protein_id=HIH2232297.1;transl_table=11 DBLQKW010000059.1 tpg gene 3849 3971 . - . ID=gene-ACYKK2_001697;Name=ACYKK2_001697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001697 DBLQKW010000059.1 GeneMarkS-2+ CDS 3849 3971 . - 0 ID=cds-HIH2232298.1;Parent=gene-ACYKK2_001697;Dbxref=NCBI_GP:HIH2232298.1;Name=HIH2232298.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001697;product=hypothetical protein;protein_id=HIH2232298.1;transl_table=11 DBLQKW010000059.1 tpg pseudogene 3983 4265 . - . ID=gene-ACYKK2_001698;Name=ACYKK2_001698;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001698;pseudo=true DBLQKW010000059.1 Protein Homology CDS 3983 4265 . - 0 ID=cds-ACYKK2_001698;Parent=gene-ACYKK2_001698;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002782140.1;locus_tag=ACYKK2_001698;product=type II toxin-antitoxin system YafQ family toxin;pseudo=true;transl_table=11 DBLQKW010000059.1 tpg gene 4252 4479 . - . ID=gene-ACYKK2_001699;Name=ACYKK2_001699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001699 DBLQKW010000059.1 Protein Homology CDS 4252 4479 . - 0 ID=cds-HIH2232299.1;Parent=gene-ACYKK2_001699;Dbxref=NCBI_GP:HIH2232299.1;Name=HIH2232299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002782139.1;locus_tag=ACYKK2_001699;product=hypothetical protein;protein_id=HIH2232299.1;transl_table=11 DBLQKW010000059.1 tpg gene 4751 4891 . + . ID=gene-ACYKK2_001700;Name=ACYKK2_001700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001700 DBLQKW010000059.1 GeneMarkS-2+ CDS 4751 4891 . + 0 ID=cds-HIH2232300.1;Parent=gene-ACYKK2_001700;Dbxref=NCBI_GP:HIH2232300.1;Name=HIH2232300.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001700;product=hypothetical protein;protein_id=HIH2232300.1;transl_table=11 DBLQKW010000059.1 tpg pseudogene 4898 5156 . + . ID=gene-ACYKK2_001701;Name=ACYKK2_001701;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001701;pseudo=true DBLQKW010000059.1 Protein Homology CDS 4898 5156 . + 0 ID=cds-ACYKK2_001701;Parent=gene-ACYKK2_001701;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016301,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=kinase activity|0016301||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846614.1;locus_tag=ACYKK2_001701;product=type II toxin-antitoxin system death-on-curing family toxin;pseudo=true;transl_table=11 DBLQKW010000059.1 tpg gene 5243 5374 . + . ID=gene-ACYKK2_001702;Name=ACYKK2_001702;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001702 DBLQKW010000059.1 Protein Homology CDS 5243 5374 . + 0 ID=cds-HIH2232301.1;Parent=gene-ACYKK2_001702;Dbxref=NCBI_GP:HIH2232301.1;Name=HIH2232301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887130.1;locus_tag=ACYKK2_001702;product=hypothetical protein;protein_id=HIH2232301.1;transl_table=11 DBLQKW010000059.1 tpg gene 5386 5529 . + . ID=gene-ACYKK2_001703;Name=ACYKK2_001703;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001703 DBLQKW010000059.1 Protein Homology CDS 5386 5529 . + 0 ID=cds-HIH2232302.1;Parent=gene-ACYKK2_001703;Dbxref=NCBI_GP:HIH2232302.1;Name=HIH2232302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002807233.1;locus_tag=ACYKK2_001703;product=hypothetical protein;protein_id=HIH2232302.1;transl_table=11 DBLQKW010000059.1 tpg gene 6083 6314 . - . ID=gene-ACYKK2_001704;Name=ACYKK2_001704;end_range=6314,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001704;partial=true DBLQKW010000059.1 GeneMarkS-2+ CDS 6083 6314 . - 1 ID=cds-HIH2232303.1;Parent=gene-ACYKK2_001704;Dbxref=NCBI_GP:HIH2232303.1;Name=HIH2232303.1;end_range=6314,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001704;partial=true;product=hypothetical protein;protein_id=HIH2232303.1;transl_table=11 ##sequence-region DBLQKW010000060.1 1 6300 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000060.1 tpg region 1 6300 . + . ID=DBLQKW010000060.1:1..6300;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000060.1 tpg gene 1 958 . + . ID=gene-ACYKK2_001705;Name=ACYKK2_001705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001705;partial=true;start_range=.,1 DBLQKW010000060.1 Protein Homology CDS 1 958 . + 1 ID=cds-HIH2232304.1;Parent=gene-ACYKK2_001705;Dbxref=NCBI_GP:HIH2232304.1;Name=HIH2232304.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046612.2;locus_tag=ACYKK2_001705;partial=true;product=bacteriophage T4 gp5 trimerization domain-containing protein;protein_id=HIH2232304.1;start_range=.,1;transl_table=11 DBLQKW010000060.1 tpg gene 1024 1938 . + . ID=gene-ACYKK2_001706;Name=ACYKK2_001706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001706 DBLQKW010000060.1 Protein Homology CDS 1024 1938 . + 0 ID=cds-HIH2232305.1;Parent=gene-ACYKK2_001706;Dbxref=NCBI_GP:HIH2232305.1;Name=HIH2232305.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016818295.1;locus_tag=ACYKK2_001706;product=ankyrin repeat domain-containing protein;protein_id=HIH2232305.1;transl_table=11 DBLQKW010000060.1 tpg gene 1931 3622 . + . ID=gene-ACYKK2_001707;Name=ACYKK2_001707;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001707 DBLQKW010000060.1 Protein Homology CDS 1931 3622 . + 0 ID=cds-HIH2232306.1;Parent=gene-ACYKK2_001707;Dbxref=NCBI_GP:HIH2232306.1;Name=HIH2232306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002779650.1;locus_tag=ACYKK2_001707;product=putative toxin;protein_id=HIH2232306.1;transl_table=11 DBLQKW010000060.1 tpg gene 3633 4571 . + . ID=gene-ACYKK2_001708;Name=ACYKK2_001708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001708 DBLQKW010000060.1 Protein Homology CDS 3633 4571 . + 0 ID=cds-HIH2232307.1;Parent=gene-ACYKK2_001708;Dbxref=NCBI_GP:HIH2232307.1;Name=HIH2232307.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016818297.1;locus_tag=ACYKK2_001708;product=ankyrin repeat domain-containing protein;protein_id=HIH2232307.1;transl_table=11 DBLQKW010000060.1 tpg gene 4617 5081 . + . ID=gene-ACYKK2_001709;Name=ACYKK2_001709;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001709 DBLQKW010000060.1 Protein Homology CDS 4617 5081 . + 0 ID=cds-HIH2232308.1;Parent=gene-ACYKK2_001709;Dbxref=NCBI_GP:HIH2232308.1;Name=HIH2232308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002785455.1;locus_tag=ACYKK2_001709;product=hypothetical protein;protein_id=HIH2232308.1;transl_table=11 DBLQKW010000060.1 tpg gene 5078 6300 . + . ID=gene-ACYKK2_001710;Name=ACYKK2_001710;end_range=6300,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001710;partial=true DBLQKW010000060.1 Protein Homology CDS 5078 6300 . + 0 ID=cds-HIH2232309.1;Parent=gene-ACYKK2_001710;Dbxref=NCBI_GP:HIH2232309.1;Name=HIH2232309.1;end_range=6300,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002779731.1;locus_tag=ACYKK2_001710;partial=true;product=hypothetical protein;protein_id=HIH2232309.1;transl_table=11 ##sequence-region DBLQKW010000061.1 1 6202 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000061.1 tpg region 1 6202 . + . ID=DBLQKW010000061.1:1..6202;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000061.1 tpg gene 1 317 . + . ID=gene-ACYKK2_001711;Name=ACYKK2_001711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001711;partial=true;start_range=.,1 DBLQKW010000061.1 Protein Homology CDS 1 317 . + 2 ID=cds-HIH2232310.1;Parent=gene-ACYKK2_001711;Dbxref=NCBI_GP:HIH2232310.1;Name=HIH2232310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344643.1;locus_tag=ACYKK2_001711;partial=true;product=LPS-assembly protein LptD;protein_id=HIH2232310.1;start_range=.,1;transl_table=11 DBLQKW010000061.1 tpg gene 387 2546 . + . ID=gene-ACYKK2_001712;Name=ACYKK2_001712;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001712 DBLQKW010000061.1 Protein Homology CDS 387 2546 . + 0 ID=cds-HIH2232311.1;Parent=gene-ACYKK2_001712;Dbxref=NCBI_GP:HIH2232311.1;Name=HIH2232311.1;Ontology_term=GO:0006396,GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=RNA processing|0006396||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344644.1;locus_tag=ACYKK2_001712;product=polyribonucleotide nucleotidyltransferase;protein_id=HIH2232311.1;transl_table=11 DBLQKW010000061.1 tpg gene 2543 3025 . + . ID=gene-ACYKK2_001713;Name=ACYKK2_001713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001713 DBLQKW010000061.1 Protein Homology CDS 2543 3025 . + 0 ID=cds-HIH2232312.1;Parent=gene-ACYKK2_001713;Dbxref=NCBI_GP:HIH2232312.1;Name=HIH2232312.1;Ontology_term=GO:0006285,GO:0033958;gbkey=CDS;go_function=DNA-deoxyinosine glycosylase activity|0033958||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344645.1;locus_tag=ACYKK2_001713;product=DNA-deoxyinosine glycosylase;protein_id=HIH2232312.1;transl_table=11 DBLQKW010000061.1 tpg gene 3068 3730 . - . ID=gene-ACYKK2_001714;Name=ACYKK2_001714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001714 DBLQKW010000061.1 Protein Homology CDS 3068 3730 . - 0 ID=cds-HIH2232313.1;Parent=gene-ACYKK2_001714;Dbxref=NCBI_GP:HIH2232313.1;Name=HIH2232313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344647.1;locus_tag=ACYKK2_001714;product=DUF4230 domain-containing protein;protein_id=HIH2232313.1;transl_table=11 DBLQKW010000061.1 tpg gene 3748 4932 . - . ID=gene-ACYKK2_001715;Name=ACYKK2_001715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001715 DBLQKW010000061.1 Protein Homology CDS 3748 4932 . - 0 ID=cds-HIH2232314.1;Parent=gene-ACYKK2_001715;Dbxref=NCBI_GP:HIH2232314.1;Name=HIH2232314.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344648.1;locus_tag=ACYKK2_001715;product=MFS transporter;protein_id=HIH2232314.1;transl_table=11 DBLQKW010000061.1 tpg gene 4986 5441 . + . ID=gene-ACYKK2_001716;Name=ACYKK2_001716;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001716 DBLQKW010000061.1 Protein Homology CDS 4986 5441 . + 0 ID=cds-HIH2232315.1;Parent=gene-ACYKK2_001716;Dbxref=NCBI_GP:HIH2232315.1;Name=HIH2232315.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344649.1;locus_tag=ACYKK2_001716;product=low molecular weight protein-tyrosine-phosphatase;protein_id=HIH2232315.1;transl_table=11 DBLQKW010000061.1 tpg gene 5692 6202 . + . ID=gene-ACYKK2_001717;Name=ACYKK2_001717;end_range=6202,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001717;partial=true DBLQKW010000061.1 Protein Homology CDS 5692 6202 . + 0 ID=cds-HIH2232316.1;Parent=gene-ACYKK2_001717;Dbxref=NCBI_GP:HIH2232316.1;Name=HIH2232316.1;end_range=6202,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344650.1;locus_tag=ACYKK2_001717;partial=true;product=major outer membrane protein;protein_id=HIH2232316.1;transl_table=11 ##sequence-region DBLQKW010000062.1 1 5911 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000062.1 tpg region 1 5911 . + . ID=DBLQKW010000062.1:1..5911;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000062.1 tpg gene 1 191 . + . ID=gene-ACYKK2_001718;Name=ACYKK2_001718;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001718;partial=true;start_range=.,1 DBLQKW010000062.1 Protein Homology CDS 1 191 . + 2 ID=cds-HIH2232317.1;Parent=gene-ACYKK2_001718;Dbxref=NCBI_GP:HIH2232317.1;Name=HIH2232317.1;Ontology_term=GO:0071973,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344726.1;locus_tag=ACYKK2_001718;partial=true;product=flagellin;protein_id=HIH2232317.1;start_range=.,1;transl_table=11 DBLQKW010000062.1 tpg gene 222 2108 . - . ID=gene-ACYKK2_001719;Name=ACYKK2_001719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001719 DBLQKW010000062.1 Protein Homology CDS 222 2108 . - 0 ID=cds-HIH2232318.1;Parent=gene-ACYKK2_001719;Dbxref=NCBI_GP:HIH2232318.1;Name=HIH2232318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344725.1;locus_tag=ACYKK2_001719;product=motility associated factor glycosyltransferase family protein;protein_id=HIH2232318.1;transl_table=11 DBLQKW010000062.1 tpg gene 2105 4051 . - . ID=gene-ACYKK2_001720;Name=ACYKK2_001720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001720 DBLQKW010000062.1 Protein Homology CDS 2105 4051 . - 0 ID=cds-HIH2232319.1;Parent=gene-ACYKK2_001720;Dbxref=NCBI_GP:HIH2232319.1;Name=HIH2232319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344708.1;locus_tag=ACYKK2_001720;product=motility associated factor glycosyltransferase family protein;protein_id=HIH2232319.1;transl_table=11 DBLQKW010000062.1 tpg gene 4064 5911 . - . ID=gene-ACYKK2_001721;Name=ACYKK2_001721;end_range=5911,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001721;partial=true DBLQKW010000062.1 Protein Homology CDS 4064 5911 . - 0 ID=cds-HIH2232320.1;Parent=gene-ACYKK2_001721;Dbxref=NCBI_GP:HIH2232320.1;Name=HIH2232320.1;end_range=5911,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344723.1;locus_tag=ACYKK2_001721;partial=true;product=motility associated factor glycosyltransferase family protein;protein_id=HIH2232320.1;transl_table=11 ##sequence-region DBLQKW010000063.1 1 5746 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000063.1 tpg region 1 5746 . + . ID=DBLQKW010000063.1:1..5746;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000063.1 tpg gene 1 477 . + . ID=gene-ACYKK2_001722;Name=ACYKK2_001722;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001722;partial=true;start_range=.,1 DBLQKW010000063.1 Protein Homology CDS 1 477 . + 0 ID=cds-HIH2232321.1;Parent=gene-ACYKK2_001722;Dbxref=NCBI_GP:HIH2232321.1;Name=HIH2232321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002867143.1;locus_tag=ACYKK2_001722;partial=true;product=hypothetical protein;protein_id=HIH2232321.1;start_range=.,1;transl_table=11 DBLQKW010000063.1 tpg gene 481 1380 . - . ID=gene-ACYKK2_001723;Name=ACYKK2_001723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001723 DBLQKW010000063.1 Protein Homology CDS 481 1380 . - 0 ID=cds-HIH2232322.1;Parent=gene-ACYKK2_001723;Dbxref=NCBI_GP:HIH2232322.1;Name=HIH2232322.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002779664.1;locus_tag=ACYKK2_001723;product=FHA domain-containing protein;protein_id=HIH2232322.1;transl_table=11 DBLQKW010000063.1 tpg gene 1377 4904 . - . ID=gene-ACYKK2_001724;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=ACYKK2_001724 DBLQKW010000063.1 Protein Homology CDS 1377 4904 . - 0 ID=cds-HIH2232323.1;Parent=gene-ACYKK2_001724;Dbxref=NCBI_GP:HIH2232323.1;Name=HIH2232323.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssM;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002914594.1;locus_tag=ACYKK2_001724;product=type VI secretion system membrane subunit TssM;protein_id=HIH2232323.1;transl_table=11 DBLQKW010000063.1 tpg gene 5022 5537 . + . ID=gene-ACYKK2_001725;Name=ACYKK2_001725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001725 DBLQKW010000063.1 Protein Homology CDS 5022 5537 . + 0 ID=cds-HIH2232324.1;Parent=gene-ACYKK2_001725;Dbxref=NCBI_GP:HIH2232324.1;Name=HIH2232324.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002862966.1;locus_tag=ACYKK2_001725;product=Hcp family type VI secretion system effector;protein_id=HIH2232324.1;transl_table=11 ##sequence-region DBLQKW010000064.1 1 5605 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000064.1 tpg region 1 5605 . + . ID=DBLQKW010000064.1:1..5605;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000064.1 tpg gene 1 1056 . - . ID=gene-ACYKK2_001726;Name=ACYKK2_001726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001726;partial=true;start_range=.,1 DBLQKW010000064.1 Protein Homology CDS 1 1056 . - 0 ID=cds-HIH2232325.1;Parent=gene-ACYKK2_001726;Dbxref=NCBI_GP:HIH2232325.1;Name=HIH2232325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002853525.1;locus_tag=ACYKK2_001726;partial=true;product=DUF2920 family protein;protein_id=HIH2232325.1;start_range=.,1;transl_table=11 DBLQKW010000064.1 tpg gene 1135 1833 . + . ID=gene-ACYKK2_001727;Name=pseF;gbkey=Gene;gene=pseF;gene_biotype=protein_coding;locus_tag=ACYKK2_001727 DBLQKW010000064.1 Protein Homology CDS 1135 1833 . + 0 ID=cds-HIH2232326.1;Parent=gene-ACYKK2_001727;Dbxref=NCBI_GP:HIH2232326.1;Name=HIH2232326.1;Ontology_term=GO:0070567;gbkey=CDS;gene=pseF;go_function=cytidylyltransferase activity|0070567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344701.1;locus_tag=ACYKK2_001727;product=pseudaminic acid cytidylyltransferase;protein_id=HIH2232326.1;transl_table=11 DBLQKW010000064.1 tpg gene 1817 2641 . + . ID=gene-ACYKK2_001728;Name=pseG;gbkey=Gene;gene=pseG;gene_biotype=protein_coding;locus_tag=ACYKK2_001728 DBLQKW010000064.1 Protein Homology CDS 1817 2641 . + 0 ID=cds-HIH2232327.1;Parent=gene-ACYKK2_001728;Dbxref=NCBI_GP:HIH2232327.1;Name=HIH2232327.1;Ontology_term=GO:0016758;gbkey=CDS;gene=pseG;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344702.1;locus_tag=ACYKK2_001728;product=UDP-2%2C4-diacetamido-2%2C4%2C6-trideoxy-beta-L-altropyranose hydrolase;protein_id=HIH2232327.1;transl_table=11 DBLQKW010000064.1 tpg gene 2638 3111 . + . ID=gene-ACYKK2_001729;Name=pseH;gbkey=Gene;gene=pseH;gene_biotype=protein_coding;locus_tag=ACYKK2_001729 DBLQKW010000064.1 Protein Homology CDS 2638 3111 . + 0 ID=cds-HIH2232328.1;Parent=gene-ACYKK2_001729;Dbxref=NCBI_GP:HIH2232328.1;Name=HIH2232328.1;Ontology_term=GO:0009058,GO:0008080;gbkey=CDS;gene=pseH;go_function=N-acetyltransferase activity|0008080||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344703.1;locus_tag=ACYKK2_001729;product=UDP-4-amino-4%2C6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase;protein_id=HIH2232328.1;transl_table=11 DBLQKW010000064.1 tpg gene 3076 3822 . - . ID=gene-ACYKK2_001730;Name=wbuZ;gbkey=Gene;gene=wbuZ;gene_biotype=protein_coding;locus_tag=ACYKK2_001730 DBLQKW010000064.1 Protein Homology CDS 3076 3822 . - 0 ID=cds-HIH2232329.1;Parent=gene-ACYKK2_001730;Dbxref=NCBI_GP:HIH2232329.1;Name=HIH2232329.1;Ontology_term=GO:0016833;gbkey=CDS;gene=wbuZ;go_function=oxo-acid-lyase activity|0016833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344704.1;locus_tag=ACYKK2_001730;product=glycosyl amidation-associated protein WbuZ;protein_id=HIH2232329.1;transl_table=11 DBLQKW010000064.1 tpg gene 3823 4428 . - . ID=gene-ACYKK2_001731;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=ACYKK2_001731 DBLQKW010000064.1 Protein Homology CDS 3823 4428 . - 0 ID=cds-HIH2232330.1;Parent=gene-ACYKK2_001731;Dbxref=NCBI_GP:HIH2232330.1;Name=HIH2232330.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344705.1;locus_tag=ACYKK2_001731;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=HIH2232330.1;transl_table=11 DBLQKW010000064.1 tpg gene 4425 5561 . - . ID=gene-ACYKK2_001732;Name=pseA;gbkey=Gene;gene=pseA;gene_biotype=protein_coding;locus_tag=ACYKK2_001732 DBLQKW010000064.1 Protein Homology CDS 4425 5561 . - 0 ID=cds-HIH2232331.1;Parent=gene-ACYKK2_001732;Dbxref=NCBI_GP:HIH2232331.1;Name=HIH2232331.1;gbkey=CDS;gene=pseA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344706.1;locus_tag=ACYKK2_001732;product=pseudaminic acid biosynthesis protein PseA;protein_id=HIH2232331.1;transl_table=11 ##sequence-region DBLQKW010000065.1 1 5481 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000065.1 tpg region 1 5481 . + . ID=DBLQKW010000065.1:1..5481;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000065.1 tpg gene 1 1583 . + . ID=gene-ACYKK2_001733;Name=ACYKK2_001733;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001733;partial=true;start_range=.,1 DBLQKW010000065.1 Protein Homology CDS 1 1583 . + 2 ID=cds-HIH2232332.1;Parent=gene-ACYKK2_001733;Dbxref=NCBI_GP:HIH2232332.1;Name=HIH2232332.1;Ontology_term=GO:0019350,GO:0071555,GO:0047355;gbkey=CDS;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002909437.1;locus_tag=ACYKK2_001733;partial=true;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=HIH2232332.1;start_range=.,1;transl_table=11 DBLQKW010000065.1 tpg gene 1624 3075 . + . ID=gene-ACYKK2_001734;Name=ACYKK2_001734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001734 DBLQKW010000065.1 Protein Homology CDS 1624 3075 . + 0 ID=cds-HIH2232333.1;Parent=gene-ACYKK2_001734;Dbxref=NCBI_GP:HIH2232333.1;Name=HIH2232333.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: protein motif:HMM:NF013652.6;locus_tag=ACYKK2_001734;product=glycosyltransferase family 8 protein;protein_id=HIH2232333.1;transl_table=11 DBLQKW010000065.1 tpg gene 3085 4437 . - . ID=gene-ACYKK2_001735;Name=ACYKK2_001735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001735 DBLQKW010000065.1 Protein Homology CDS 3085 4437 . - 0 ID=cds-HIH2232334.1;Parent=gene-ACYKK2_001735;Dbxref=NCBI_GP:HIH2232334.1;Name=HIH2232334.1;Ontology_term=GO:0003824,GO:0005524;gbkey=CDS;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002870914.1;locus_tag=ACYKK2_001735;product=ANL family adenylate-forming protein;protein_id=HIH2232334.1;transl_table=11 DBLQKW010000065.1 tpg gene 4430 5161 . - . ID=gene-ACYKK2_001736;Name=ACYKK2_001736;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001736 DBLQKW010000065.1 Protein Homology CDS 4430 5161 . - 0 ID=cds-HIH2232335.1;Parent=gene-ACYKK2_001736;Dbxref=NCBI_GP:HIH2232335.1;Name=HIH2232335.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002909439.1;locus_tag=ACYKK2_001736;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=HIH2232335.1;transl_table=11 DBLQKW010000065.1 tpg gene 5163 5481 . - . ID=gene-ACYKK2_001737;Name=ACYKK2_001737;end_range=5481,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001737;partial=true DBLQKW010000065.1 GeneMarkS-2+ CDS 5163 5481 . - 1 ID=cds-HIH2232336.1;Parent=gene-ACYKK2_001737;Dbxref=NCBI_GP:HIH2232336.1;Name=HIH2232336.1;end_range=5481,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001737;partial=true;product=hypothetical protein;protein_id=HIH2232336.1;transl_table=11 ##sequence-region DBLQKW010000066.1 1 5316 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000066.1 tpg region 1 5316 . + . ID=DBLQKW010000066.1:1..5316;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000066.1 tpg gene 69 479 . - . ID=gene-ACYKK2_001738;Name=ACYKK2_001738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001738 DBLQKW010000066.1 Protein Homology CDS 69 479 . - 0 ID=cds-HIH2232337.1;Parent=gene-ACYKK2_001738;Dbxref=NCBI_GP:HIH2232337.1;Name=HIH2232337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343873.1;locus_tag=ACYKK2_001738;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=HIH2232337.1;transl_table=11 DBLQKW010000066.1 tpg gene 486 1229 . - . ID=gene-ACYKK2_001739;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=ACYKK2_001739 DBLQKW010000066.1 Protein Homology CDS 486 1229 . - 0 ID=cds-HIH2232338.1;Parent=gene-ACYKK2_001739;Dbxref=NCBI_GP:HIH2232338.1;Name=HIH2232338.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fabG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343872.1;locus_tag=ACYKK2_001739;product=3-oxoacyl-ACP reductase FabG;protein_id=HIH2232338.1;transl_table=11 DBLQKW010000066.1 tpg gene 1219 1317 . - . ID=gene-ACYKK2_001740;Name=ACYKK2_001740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001740 DBLQKW010000066.1 Protein Homology CDS 1219 1317 . - 0 ID=cds-HIH2232339.1;Parent=gene-ACYKK2_001740;Dbxref=NCBI_GP:HIH2232339.1;Name=HIH2232339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002869268.1;locus_tag=ACYKK2_001740;product=3-ketoacyl-ACP reductase;protein_id=HIH2232339.1;transl_table=11 DBLQKW010000066.1 tpg gene 1301 2779 . - . ID=gene-ACYKK2_001741;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=protein_coding;locus_tag=ACYKK2_001741 DBLQKW010000066.1 Protein Homology CDS 1301 2779 . - 0 ID=cds-HIH2232340.1;Parent=gene-ACYKK2_001741;Dbxref=NCBI_GP:HIH2232340.1;Name=HIH2232340.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmI;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343871.1;locus_tag=ACYKK2_001741;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=HIH2232340.1;transl_table=11 DBLQKW010000066.1 tpg gene 2859 3920 . + . ID=gene-ACYKK2_001742;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=ACYKK2_001742 DBLQKW010000066.1 Protein Homology CDS 2859 3920 . + 0 ID=cds-HIH2232341.1;Parent=gene-ACYKK2_001742;Dbxref=NCBI_GP:HIH2232341.1;Name=HIH2232341.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343870.1;locus_tag=ACYKK2_001742;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=HIH2232341.1;transl_table=11 DBLQKW010000066.1 tpg gene 3920 5128 . + . ID=gene-ACYKK2_001743;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=ACYKK2_001743 DBLQKW010000066.1 Protein Homology CDS 3920 5128 . + 0 ID=cds-HIH2232342.1;Parent=gene-ACYKK2_001743;Dbxref=NCBI_GP:HIH2232342.1;Name=HIH2232342.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343869.1;locus_tag=ACYKK2_001743;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=HIH2232342.1;transl_table=11 ##sequence-region DBLQKW010000067.1 1 5134 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000067.1 tpg region 1 5134 . + . ID=DBLQKW010000067.1:1..5134;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000067.1 tpg gene 94 1137 . + . ID=gene-ACYKK2_001744;Name=ACYKK2_001744;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001744 DBLQKW010000067.1 Protein Homology CDS 94 1137 . + 0 ID=cds-HIH2232343.1;Parent=gene-ACYKK2_001744;Dbxref=NCBI_GP:HIH2232343.1;Name=HIH2232343.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343508.1;locus_tag=ACYKK2_001744;product=c-type cytochrome;protein_id=HIH2232343.1;transl_table=11 DBLQKW010000067.1 tpg gene 1161 2510 . - . ID=gene-ACYKK2_001745;Name=ACYKK2_001745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001745 DBLQKW010000067.1 Protein Homology CDS 1161 2510 . - 0 ID=cds-HIH2232344.1;Parent=gene-ACYKK2_001745;Dbxref=NCBI_GP:HIH2232344.1;Name=HIH2232344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343507.1;locus_tag=ACYKK2_001745;product=DUF2130 domain-containing protein;protein_id=HIH2232344.1;transl_table=11 DBLQKW010000067.1 tpg gene 2613 3815 . + . ID=gene-ACYKK2_001746;Name=ACYKK2_001746;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001746 DBLQKW010000067.1 Protein Homology CDS 2613 3815 . + 0 ID=cds-HIH2232345.1;Parent=gene-ACYKK2_001746;Dbxref=NCBI_GP:HIH2232345.1;Name=HIH2232345.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343506.1;locus_tag=ACYKK2_001746;product=multidrug effflux MFS transporter;protein_id=HIH2232345.1;transl_table=11 DBLQKW010000067.1 tpg gene 3812 4513 . + . ID=gene-ACYKK2_001747;Name=ACYKK2_001747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001747 DBLQKW010000067.1 Protein Homology CDS 3812 4513 . + 0 ID=cds-HIH2232346.1;Parent=gene-ACYKK2_001747;Dbxref=NCBI_GP:HIH2232346.1;Name=HIH2232346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343505.1;locus_tag=ACYKK2_001747;product=SIMPL domain-containing protein;protein_id=HIH2232346.1;transl_table=11 DBLQKW010000067.1 tpg gene 4570 5134 . - . ID=gene-ACYKK2_001748;Name=ACYKK2_001748;end_range=5134,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001748;partial=true DBLQKW010000067.1 GeneMarkS-2+ CDS 4570 5134 . - 1 ID=cds-HIH2232347.1;Parent=gene-ACYKK2_001748;Dbxref=NCBI_GP:HIH2232347.1;Name=HIH2232347.1;end_range=5134,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001748;partial=true;product=P-loop NTPase fold protein;protein_id=HIH2232347.1;transl_table=11 ##sequence-region DBLQKW010000068.1 1 5081 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000068.1 tpg region 1 5081 . + . ID=DBLQKW010000068.1:1..5081;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000068.1 tpg gene 53 562 . - . ID=gene-ACYKK2_001749;Name=ACYKK2_001749;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001749 DBLQKW010000068.1 Protein Homology CDS 53 562 . - 0 ID=cds-HIH2232348.1;Parent=gene-ACYKK2_001749;Dbxref=NCBI_GP:HIH2232348.1;Name=HIH2232348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343708.1;locus_tag=ACYKK2_001749;product=DUF2393 family protein;protein_id=HIH2232348.1;transl_table=11 DBLQKW010000068.1 tpg gene 562 1092 . - . ID=gene-ACYKK2_001750;Name=ACYKK2_001750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001750 DBLQKW010000068.1 Protein Homology CDS 562 1092 . - 0 ID=cds-HIH2232349.1;Parent=gene-ACYKK2_001750;Dbxref=NCBI_GP:HIH2232349.1;Name=HIH2232349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343709.1;locus_tag=ACYKK2_001750;product=DUF2393 domain-containing protein;protein_id=HIH2232349.1;transl_table=11 DBLQKW010000068.1 tpg gene 1105 2193 . - . ID=gene-ACYKK2_001751;Name=ACYKK2_001751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001751 DBLQKW010000068.1 Protein Homology CDS 1105 2193 . - 0 ID=cds-HIH2232350.1;Parent=gene-ACYKK2_001751;Dbxref=NCBI_GP:HIH2232350.1;Name=HIH2232350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343710.1;locus_tag=ACYKK2_001751;product=SPFH domain-containing protein;protein_id=HIH2232350.1;transl_table=11 DBLQKW010000068.1 tpg gene 2206 3120 . - . ID=gene-ACYKK2_001752;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=ACYKK2_001752 DBLQKW010000068.1 Protein Homology CDS 2206 3120 . - 0 ID=cds-HIH2232351.1;Parent=gene-ACYKK2_001752;Dbxref=NCBI_GP:HIH2232351.1;Name=HIH2232351.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343711.1;locus_tag=ACYKK2_001752;product=branched-chain-amino-acid transaminase;protein_id=HIH2232351.1;transl_table=11 DBLQKW010000068.1 tpg gene 3296 3502 . + . ID=gene-ACYKK2_001753;Name=ACYKK2_001753;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001753 DBLQKW010000068.1 Protein Homology CDS 3296 3502 . + 0 ID=cds-HIH2232352.1;Parent=gene-ACYKK2_001753;Dbxref=NCBI_GP:HIH2232352.1;Name=HIH2232352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343712.1;locus_tag=ACYKK2_001753;product=4-oxalocrotonate tautomerase family protein;protein_id=HIH2232352.1;transl_table=11 DBLQKW010000068.1 tpg gene 3499 3954 . + . ID=gene-ACYKK2_001754;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=ACYKK2_001754 DBLQKW010000068.1 Protein Homology CDS 3499 3954 . + 0 ID=cds-HIH2232353.1;Parent=gene-ACYKK2_001754;Dbxref=NCBI_GP:HIH2232353.1;Name=HIH2232353.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343713.1;locus_tag=ACYKK2_001754;product=thioredoxin-dependent thiol peroxidase;protein_id=HIH2232353.1;transl_table=11 DBLQKW010000068.1 tpg gene 3954 5045 . + . ID=gene-ACYKK2_001755;Name=ACYKK2_001755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001755 DBLQKW010000068.1 Protein Homology CDS 3954 5045 . + 0 ID=cds-HIH2232354.1;Parent=gene-ACYKK2_001755;Dbxref=NCBI_GP:HIH2232354.1;Name=HIH2232354.1;Ontology_term=GO:0008033,GO:0008616,GO:0046872,GO:0051539,GO:0052693;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343714.1;locus_tag=ACYKK2_001755;product=epoxyqueuosine reductase QueH;protein_id=HIH2232354.1;transl_table=11 ##sequence-region DBLQKW010000069.1 1 4844 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000069.1 tpg region 1 4844 . + . ID=DBLQKW010000069.1:1..4844;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000069.1 tpg pseudogene 1 814 . - . ID=gene-ACYKK2_001756;Name=ACYKK2_001756;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001756;pseudo=true DBLQKW010000069.1 Protein Homology CDS 1 814 . - 0 ID=cds-ACYKK2_001756;Parent=gene-ACYKK2_001756;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344696.1;locus_tag=ACYKK2_001756;product=DUF2920 family protein;pseudo=true;transl_table=11 DBLQKW010000069.1 tpg gene 875 2383 . + . ID=gene-ACYKK2_001757;Name=ACYKK2_001757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001757 DBLQKW010000069.1 Protein Homology CDS 875 2383 . + 0 ID=cds-HIH2232355.1;Parent=gene-ACYKK2_001757;Dbxref=NCBI_GP:HIH2232355.1;Name=HIH2232355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344697.1;locus_tag=ACYKK2_001757;product=AMP-binding protein;protein_id=HIH2232355.1;transl_table=11 DBLQKW010000069.1 tpg gene 2423 2650 . + . ID=gene-ACYKK2_001758;Name=ACYKK2_001758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001758 DBLQKW010000069.1 Protein Homology CDS 2423 2650 . + 0 ID=cds-HIH2232356.1;Parent=gene-ACYKK2_001758;Dbxref=NCBI_GP:HIH2232356.1;Name=HIH2232356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344698.1;locus_tag=ACYKK2_001758;product=acyl carrier protein;protein_id=HIH2232356.1;transl_table=11 DBLQKW010000069.1 tpg gene 2647 3717 . - . ID=gene-ACYKK2_001759;Name=ACYKK2_001759;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001759 DBLQKW010000069.1 Protein Homology CDS 2647 3717 . - 0 ID=cds-HIH2232357.1;Parent=gene-ACYKK2_001759;Dbxref=NCBI_GP:HIH2232357.1;Name=HIH2232357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344699.1;locus_tag=ACYKK2_001759;product=acyl carrier protein;protein_id=HIH2232357.1;transl_table=11 DBLQKW010000069.1 tpg gene 3739 4844 . - . ID=gene-ACYKK2_001760;Name=ACYKK2_001760;end_range=4844,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001760;partial=true DBLQKW010000069.1 Protein Homology CDS 3739 4844 . - 2 ID=cds-HIH2232358.1;Parent=gene-ACYKK2_001760;Dbxref=NCBI_GP:HIH2232358.1;Name=HIH2232358.1;end_range=4844,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344700.1;locus_tag=ACYKK2_001760;partial=true;product=DUF2920 family protein;protein_id=HIH2232358.1;transl_table=11 ##sequence-region DBLQKW010000070.1 1 4692 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000070.1 tpg region 1 4692 . + . ID=DBLQKW010000070.1:1..4692;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000070.1 tpg gene 41 3784 . + . ID=gene-ACYKK2_001761;Name=ACYKK2_001761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001761 DBLQKW010000070.1 Protein Homology CDS 41 3784 . + 0 ID=cds-HIH2232359.1;Parent=gene-ACYKK2_001761;Dbxref=NCBI_GP:HIH2232359.1;Name=HIH2232359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002851605.1;locus_tag=ACYKK2_001761;product=class I SAM-dependent DNA methyltransferase;protein_id=HIH2232359.1;transl_table=11 DBLQKW010000070.1 tpg gene 3784 4692 . + . ID=gene-ACYKK2_001762;Name=ACYKK2_001762;end_range=4692,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001762;partial=true DBLQKW010000070.1 Protein Homology CDS 3784 4692 . + 0 ID=cds-HIH2232360.1;Parent=gene-ACYKK2_001762;Dbxref=NCBI_GP:HIH2232360.1;Name=HIH2232360.1;end_range=4692,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006655641.1;locus_tag=ACYKK2_001762;partial=true;product=P-loop NTPase fold protein;protein_id=HIH2232360.1;transl_table=11 ##sequence-region DBLQKW010000071.1 1 4357 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000071.1 tpg region 1 4357 . + . ID=DBLQKW010000071.1:1..4357;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000071.1 tpg gene 387 761 . - . ID=gene-ACYKK2_001763;Name=ACYKK2_001763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001763 DBLQKW010000071.1 Protein Homology CDS 387 761 . - 0 ID=cds-HIH2232361.1;Parent=gene-ACYKK2_001763;Dbxref=NCBI_GP:HIH2232361.1;Name=HIH2232361.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025561.6;locus_tag=ACYKK2_001763;product=TnpV protein;protein_id=HIH2232361.1;transl_table=11 DBLQKW010000071.1 tpg pseudogene 833 1225 . - . ID=gene-ACYKK2_001764;Name=ACYKK2_001764;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001764;pseudo=true DBLQKW010000071.1 Protein Homology CDS 833 1225 . - 0 ID=cds-ACYKK2_001764;Parent=gene-ACYKK2_001764;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020247107.1;locus_tag=ACYKK2_001764;product=C4-dicarboxylate transporter DcuC;pseudo=true;transl_table=11 DBLQKW010000071.1 tpg gene 1229 1591 . - . ID=gene-ACYKK2_001765;Name=ACYKK2_001765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001765 DBLQKW010000071.1 Protein Homology CDS 1229 1591 . - 0 ID=cds-HIH2232362.1;Parent=gene-ACYKK2_001765;Dbxref=NCBI_GP:HIH2232362.1;Name=HIH2232362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344776.1;locus_tag=ACYKK2_001765;product=RidA family protein;protein_id=HIH2232362.1;transl_table=11 DBLQKW010000071.1 tpg gene 1759 2415 . + . ID=gene-ACYKK2_001766;Name=ACYKK2_001766;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001766 DBLQKW010000071.1 Protein Homology CDS 1759 2415 . + 0 ID=cds-HIH2232363.1;Parent=gene-ACYKK2_001766;Dbxref=NCBI_GP:HIH2232363.1;Name=HIH2232363.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344775.1;locus_tag=ACYKK2_001766;product=helix-turn-helix transcriptional regulator;protein_id=HIH2232363.1;transl_table=11 DBLQKW010000071.1 tpg gene 2416 2886 . - . ID=gene-ACYKK2_001767;Name=ACYKK2_001767;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001767 DBLQKW010000071.1 Protein Homology CDS 2416 2886 . - 0 ID=cds-HIH2232364.1;Parent=gene-ACYKK2_001767;Dbxref=NCBI_GP:HIH2232364.1;Name=HIH2232364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344774.1;locus_tag=ACYKK2_001767;product=Cj1386 family hemin-binding protein;protein_id=HIH2232364.1;transl_table=11 DBLQKW010000071.1 tpg gene 2943 4357 . - . ID=gene-ACYKK2_001768;Name=katA;end_range=4357,.;gbkey=Gene;gene=katA;gene_biotype=protein_coding;locus_tag=ACYKK2_001768;partial=true DBLQKW010000071.1 Protein Homology CDS 2943 4357 . - 2 ID=cds-HIH2232365.1;Parent=gene-ACYKK2_001768;Dbxref=NCBI_GP:HIH2232365.1;Name=HIH2232365.1;Ontology_term=GO:0004096,GO:0020037,GO:0046872;end_range=4357,.;gbkey=CDS;gene=katA;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344773.1;locus_tag=ACYKK2_001768;partial=true;product=catalase;protein_id=HIH2232365.1;transl_table=11 ##sequence-region DBLQKW010000072.1 1 4130 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000072.1 tpg region 1 4130 . + . ID=DBLQKW010000072.1:1..4130;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000072.1 tpg gene 9 1229 . - . ID=gene-ACYKK2_001769;Name=ACYKK2_001769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001769 DBLQKW010000072.1 Protein Homology CDS 9 1229 . - 0 ID=cds-HIH2232366.1;Parent=gene-ACYKK2_001769;Dbxref=NCBI_GP:HIH2232366.1;Name=HIH2232366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344907.1;locus_tag=ACYKK2_001769;product=glucose-6-phosphate isomerase;protein_id=HIH2232366.1;transl_table=11 DBLQKW010000072.1 tpg gene 1223 2047 . - . ID=gene-ACYKK2_001770;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=ACYKK2_001770 DBLQKW010000072.1 Protein Homology CDS 1223 2047 . - 0 ID=cds-HIH2232367.1;Parent=gene-ACYKK2_001770;Dbxref=NCBI_GP:HIH2232367.1;Name=HIH2232367.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344908.1;locus_tag=ACYKK2_001770;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=HIH2232367.1;transl_table=11 DBLQKW010000072.1 tpg gene 2129 4102 . - . ID=gene-ACYKK2_001771;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=ACYKK2_001771 DBLQKW010000072.1 Protein Homology CDS 2129 4102 . - 0 ID=cds-HIH2232368.1;Parent=gene-ACYKK2_001771;Dbxref=NCBI_GP:HIH2232368.1;Name=HIH2232368.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344909.1;locus_tag=ACYKK2_001771;product=acetate--CoA ligase;protein_id=HIH2232368.1;transl_table=11 ##sequence-region DBLQKW010000073.1 1 4096 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000073.1 tpg region 1 4096 . + . ID=DBLQKW010000073.1:1..4096;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000073.1 tpg gene 5 352 . + . ID=gene-ACYKK2_001772;Name=ACYKK2_001772;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001772 DBLQKW010000073.1 Protein Homology CDS 5 352 . + 0 ID=cds-HIH2232369.1;Parent=gene-ACYKK2_001772;Dbxref=NCBI_GP:HIH2232369.1;Name=HIH2232369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002834234.1;locus_tag=ACYKK2_001772;product=hypothetical protein;protein_id=HIH2232369.1;transl_table=11 DBLQKW010000073.1 tpg gene 342 860 . + . ID=gene-ACYKK2_001773;Name=ACYKK2_001773;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001773 DBLQKW010000073.1 Protein Homology CDS 342 860 . + 0 ID=cds-HIH2232370.1;Parent=gene-ACYKK2_001773;Dbxref=NCBI_GP:HIH2232370.1;Name=HIH2232370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002779702.1;locus_tag=ACYKK2_001773;product=hypothetical protein;protein_id=HIH2232370.1;transl_table=11 DBLQKW010000073.1 tpg gene 857 1414 . + . ID=gene-ACYKK2_001774;Name=ACYKK2_001774;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001774 DBLQKW010000073.1 GeneMarkS-2+ CDS 857 1414 . + 0 ID=cds-HIH2232371.1;Parent=gene-ACYKK2_001774;Dbxref=NCBI_GP:HIH2232371.1;Name=HIH2232371.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001774;product=hypothetical protein;protein_id=HIH2232371.1;transl_table=11 DBLQKW010000073.1 tpg gene 1419 1685 . + . ID=gene-ACYKK2_001775;Name=ACYKK2_001775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001775 DBLQKW010000073.1 GeneMarkS-2+ CDS 1419 1685 . + 0 ID=cds-HIH2232372.1;Parent=gene-ACYKK2_001775;Dbxref=NCBI_GP:HIH2232372.1;Name=HIH2232372.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001775;product=hypothetical protein;protein_id=HIH2232372.1;transl_table=11 DBLQKW010000073.1 tpg gene 1744 2304 . + . ID=gene-ACYKK2_001776;Name=ACYKK2_001776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001776 DBLQKW010000073.1 Protein Homology CDS 1744 2304 . + 0 ID=cds-HIH2232373.1;Parent=gene-ACYKK2_001776;Dbxref=NCBI_GP:HIH2232373.1;Name=HIH2232373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002782407.1;locus_tag=ACYKK2_001776;product=hypothetical protein;protein_id=HIH2232373.1;transl_table=11 DBLQKW010000073.1 tpg gene 2307 2573 . + . ID=gene-ACYKK2_001777;Name=ACYKK2_001777;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001777 DBLQKW010000073.1 Protein Homology CDS 2307 2573 . + 0 ID=cds-HIH2232374.1;Parent=gene-ACYKK2_001777;Dbxref=NCBI_GP:HIH2232374.1;Name=HIH2232374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804244.1;locus_tag=ACYKK2_001777;product=hypothetical protein;protein_id=HIH2232374.1;transl_table=11 DBLQKW010000073.1 tpg gene 2620 4096 . + . ID=gene-ACYKK2_001778;Name=ACYKK2_001778;end_range=4096,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001778;partial=true DBLQKW010000073.1 Protein Homology CDS 2620 4096 . + 0 ID=cds-HIH2232375.1;Parent=gene-ACYKK2_001778;Dbxref=NCBI_GP:HIH2232375.1;Name=HIH2232375.1;Ontology_term=GO:0006304,GO:0003677,GO:0003824;end_range=4096,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019109209.1;locus_tag=ACYKK2_001778;partial=true;product=Eco57I restriction-modification methylase domain-containing protein;protein_id=HIH2232375.1;transl_table=11 ##sequence-region DBLQKW010000074.1 1 3963 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000074.1 tpg region 1 3963 . + . ID=DBLQKW010000074.1:1..3963;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000074.1 tpg gene 1 625 . - . ID=gene-ACYKK2_001779;Name=ACYKK2_001779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001779;partial=true;start_range=.,1 DBLQKW010000074.1 Protein Homology CDS 1 625 . - 0 ID=cds-HIH2232376.1;Parent=gene-ACYKK2_001779;Dbxref=NCBI_GP:HIH2232376.1;Name=HIH2232376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343509.1;locus_tag=ACYKK2_001779;partial=true;product=poly(A) polymerase;protein_id=HIH2232376.1;start_range=.,1;transl_table=11 DBLQKW010000074.1 tpg gene 625 2433 . - . ID=gene-ACYKK2_001780;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=ACYKK2_001780 DBLQKW010000074.1 Protein Homology CDS 625 2433 . - 0 ID=cds-HIH2232377.1;Parent=gene-ACYKK2_001780;Dbxref=NCBI_GP:HIH2232377.1;Name=HIH2232377.1;Ontology_term=GO:0006412,GO:0006950,GO:0003924,GO:0005525;gbkey=CDS;gene=typA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343510.1;locus_tag=ACYKK2_001780;product=translational GTPase TypA;protein_id=HIH2232377.1;transl_table=11 DBLQKW010000074.1 tpg gene 2568 2891 . + . ID=gene-ACYKK2_001781;Name=ACYKK2_001781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001781 DBLQKW010000074.1 Protein Homology CDS 2568 2891 . + 0 ID=cds-HIH2232378.1;Parent=gene-ACYKK2_001781;Dbxref=NCBI_GP:HIH2232378.1;Name=HIH2232378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343511.1;locus_tag=ACYKK2_001781;product=hypothetical protein;protein_id=HIH2232378.1;transl_table=11 DBLQKW010000074.1 tpg gene 2907 3963 . + . ID=gene-ACYKK2_001782;Name=ACYKK2_001782;end_range=3963,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001782;partial=true DBLQKW010000074.1 Protein Homology CDS 2907 3963 . + 0 ID=cds-HIH2232379.1;Parent=gene-ACYKK2_001782;Dbxref=NCBI_GP:HIH2232379.1;Name=HIH2232379.1;end_range=3963,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343512.1;locus_tag=ACYKK2_001782;partial=true;product=flagellar hook-length control protein FliK;protein_id=HIH2232379.1;transl_table=11 ##sequence-region DBLQKW010000075.1 1 3882 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000075.1 tpg region 1 3882 . + . ID=DBLQKW010000075.1:1..3882;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000075.1 tpg gene 1 882 . + . ID=gene-ACYKK2_001783;Name=ACYKK2_001783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001783;partial=true;start_range=.,1 DBLQKW010000075.1 Protein Homology CDS 1 882 . + 0 ID=cds-HIH2232380.1;Parent=gene-ACYKK2_001783;Dbxref=NCBI_GP:HIH2232380.1;Name=HIH2232380.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344395.1;locus_tag=ACYKK2_001783;partial=true;product=LysR family transcriptional regulator;protein_id=HIH2232380.1;start_range=.,1;transl_table=11 DBLQKW010000075.1 tpg gene 962 2830 . + . ID=gene-ACYKK2_001784;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=ACYKK2_001784 DBLQKW010000075.1 Protein Homology CDS 962 2830 . + 0 ID=cds-HIH2232381.1;Parent=gene-ACYKK2_001784;Dbxref=NCBI_GP:HIH2232381.1;Name=HIH2232381.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344396.1;locus_tag=ACYKK2_001784;product=RNA polymerase sigma factor RpoD;protein_id=HIH2232381.1;transl_table=11 DBLQKW010000075.1 tpg gene 2846 3358 . - . ID=gene-ACYKK2_001785;Name=ACYKK2_001785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001785 DBLQKW010000075.1 Protein Homology CDS 2846 3358 . - 0 ID=cds-HIH2232382.1;Parent=gene-ACYKK2_001785;Dbxref=NCBI_GP:HIH2232382.1;Name=HIH2232382.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344397.1;locus_tag=ACYKK2_001785;product=SixA phosphatase family protein;protein_id=HIH2232382.1;transl_table=11 DBLQKW010000075.1 tpg gene 3355 3873 . - . ID=gene-ACYKK2_001786;Name=ACYKK2_001786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001786 DBLQKW010000075.1 Protein Homology CDS 3355 3873 . - 0 ID=cds-HIH2232383.1;Parent=gene-ACYKK2_001786;Dbxref=NCBI_GP:HIH2232383.1;Name=HIH2232383.1;Ontology_term=GO:0006508,GO:0004252,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344398.1;locus_tag=ACYKK2_001786;product=rhomboid family intramembrane serine protease;protein_id=HIH2232383.1;transl_table=11 ##sequence-region DBLQKW010000076.1 1 3870 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000076.1 tpg region 1 3870 . + . ID=DBLQKW010000076.1:1..3870;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000076.1 tpg gene 30 1052 . - . ID=gene-ACYKK2_001787;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=ACYKK2_001787 DBLQKW010000076.1 Protein Homology CDS 30 1052 . - 0 ID=cds-HIH2232384.1;Parent=gene-ACYKK2_001787;Dbxref=NCBI_GP:HIH2232384.1;Name=HIH2232384.1;Ontology_term=GO:0001887,GO:0004756,GO:0005524;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA,ATP binding|0005524||IEA;go_process=selenium compound metabolic process|0001887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011049992.1;locus_tag=ACYKK2_001787;product=selenide%2C water dikinase SelD;protein_id=HIH2232384.1;transl_except=(pos:complement(1002..1004)%2Caa:Sec);transl_table=11 DBLQKW010000076.1 tpg gene 1062 1634 . - . ID=gene-ACYKK2_001788;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=ACYKK2_001788 DBLQKW010000076.1 Protein Homology CDS 1062 1634 . - 0 ID=cds-HIH2232385.1;Parent=gene-ACYKK2_001788;Dbxref=NCBI_GP:HIH2232385.1;Name=HIH2232385.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344884.1;locus_tag=ACYKK2_001788;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=HIH2232385.1;transl_table=11 DBLQKW010000076.1 tpg gene 1745 3847 . - . ID=gene-ACYKK2_001789;Name=ccaA;gbkey=Gene;gene=ccaA;gene_biotype=protein_coding;locus_tag=ACYKK2_001789 DBLQKW010000076.1 Protein Homology CDS 1745 3847 . - 0 ID=cds-HIH2232386.1;Parent=gene-ACYKK2_001789;Dbxref=NCBI_GP:HIH2232386.1;Name=HIH2232386.1;gbkey=CDS;gene=ccaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344885.1;locus_tag=ACYKK2_001789;product=aspartate chemotaxis receptor CcaA;protein_id=HIH2232386.1;transl_table=11 ##sequence-region DBLQKW010000077.1 1 3471 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000077.1 tpg region 1 3471 . + . ID=DBLQKW010000077.1:1..3471;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000077.1 tpg gene 1 394 . - . ID=gene-ACYKK2_001790;Name=ACYKK2_001790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001790;partial=true;start_range=.,1 DBLQKW010000077.1 Protein Homology CDS 1 394 . - 0 ID=cds-HIH2232387.1;Parent=gene-ACYKK2_001790;Dbxref=NCBI_GP:HIH2232387.1;Name=HIH2232387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002782092.1;locus_tag=ACYKK2_001790;partial=true;product=hypothetical protein;protein_id=HIH2232387.1;start_range=.,1;transl_table=11 DBLQKW010000077.1 tpg pseudogene 448 1470 . - . ID=gene-ACYKK2_001791;Name=ACYKK2_001791;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001791;pseudo=true DBLQKW010000077.1 Protein Homology CDS 448 1470 . - 0 ID=cds-ACYKK2_001791;Parent=gene-ACYKK2_001791;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002776826.1;locus_tag=ACYKK2_001791;product=hypothetical protein;pseudo=true;transl_table=11 DBLQKW010000077.1 tpg gene 2379 2882 . - . ID=gene-ACYKK2_001792;Name=ACYKK2_001792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001792 DBLQKW010000077.1 Protein Homology CDS 2379 2882 . - 0 ID=cds-HIH2232388.1;Parent=gene-ACYKK2_001792;Dbxref=NCBI_GP:HIH2232388.1;Name=HIH2232388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016818321.1;locus_tag=ACYKK2_001792;product=hypothetical protein;protein_id=HIH2232388.1;transl_table=11 DBLQKW010000077.1 tpg gene 2883 3014 . - . ID=gene-ACYKK2_001793;Name=ACYKK2_001793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001793 DBLQKW010000077.1 GeneMarkS-2+ CDS 2883 3014 . - 0 ID=cds-HIH2232389.1;Parent=gene-ACYKK2_001793;Dbxref=NCBI_GP:HIH2232389.1;Name=HIH2232389.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001793;product=hypothetical protein;protein_id=HIH2232389.1;transl_table=11 DBLQKW010000077.1 tpg gene 3001 3471 . - . ID=gene-ACYKK2_001794;Name=ACYKK2_001794;end_range=3471,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001794;partial=true DBLQKW010000077.1 Protein Homology CDS 3001 3471 . - 0 ID=cds-HIH2232390.1;Parent=gene-ACYKK2_001794;Dbxref=NCBI_GP:HIH2232390.1;Name=HIH2232390.1;end_range=3471,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016818321.1;locus_tag=ACYKK2_001794;partial=true;product=hypothetical protein;protein_id=HIH2232390.1;transl_table=11 ##sequence-region DBLQKW010000078.1 1 3164 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000078.1 tpg region 1 3164 . + . ID=DBLQKW010000078.1:1..3164;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000078.1 tpg gene 1 1770 . + . ID=gene-ACYKK2_001795;Name=ACYKK2_001795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001795;partial=true;start_range=.,1 DBLQKW010000078.1 Protein Homology CDS 1 1770 . + 0 ID=cds-HIH2232391.1;Parent=gene-ACYKK2_001795;Dbxref=NCBI_GP:HIH2232391.1;Name=HIH2232391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002782092.1;locus_tag=ACYKK2_001795;partial=true;product=hypothetical protein;protein_id=HIH2232391.1;start_range=.,1;transl_table=11 DBLQKW010000078.1 tpg gene 1782 3083 . + . ID=gene-ACYKK2_001796;Name=ACYKK2_001796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001796 DBLQKW010000078.1 Protein Homology CDS 1782 3083 . + 0 ID=cds-HIH2232392.1;Parent=gene-ACYKK2_001796;Dbxref=NCBI_GP:HIH2232392.1;Name=HIH2232392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005020469.1;locus_tag=ACYKK2_001796;product=hypothetical protein;protein_id=HIH2232392.1;transl_table=11 ##sequence-region DBLQKW010000079.1 1 3156 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000079.1 tpg region 1 3156 . + . ID=DBLQKW010000079.1:1..3156;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000079.1 tpg pseudogene 18 350 . + . ID=gene-ACYKK2_001797;Name=rrpB;gbkey=Gene;gene=rrpB;gene_biotype=pseudogene;locus_tag=ACYKK2_001797;pseudo=true DBLQKW010000079.1 Protein Homology CDS 18 350 . + 0 ID=cds-ACYKK2_001797;Parent=gene-ACYKK2_001797;Note=internal stop;gbkey=CDS;gene=rrpB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344927.1;locus_tag=ACYKK2_001797;product=MarR family transcription factor RrpB;pseudo=true;transl_table=11 DBLQKW010000079.1 tpg gene 435 1382 . + . ID=gene-ACYKK2_001798;Name=arsP;gbkey=Gene;gene=arsP;gene_biotype=protein_coding;locus_tag=ACYKK2_001798 DBLQKW010000079.1 Protein Homology CDS 435 1382 . + 0 ID=cds-HIH2232393.1;Parent=gene-ACYKK2_001798;Dbxref=NCBI_GP:HIH2232393.1;Name=HIH2232393.1;gbkey=CDS;gene=arsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_129557825.1;locus_tag=ACYKK2_001798;product=organoarsenical efflux permease ArsP;protein_id=HIH2232393.1;transl_table=11 DBLQKW010000079.1 tpg gene 1392 1715 . + . ID=gene-ACYKK2_001799;Name=ACYKK2_001799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001799 DBLQKW010000079.1 Protein Homology CDS 1392 1715 . + 0 ID=cds-HIH2232394.1;Parent=gene-ACYKK2_001799;Dbxref=NCBI_GP:HIH2232394.1;Name=HIH2232394.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002906233.1;locus_tag=ACYKK2_001799;product=ArsR/SmtB family transcription factor;protein_id=HIH2232394.1;transl_table=11 DBLQKW010000079.1 tpg pseudogene 1723 2153 . - . ID=gene-ACYKK2_001800;Name=ACYKK2_001800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001800;pseudo=true DBLQKW010000079.1 Protein Homology CDS 1723 2153 . - 0 ID=cds-ACYKK2_001800;Parent=gene-ACYKK2_001800;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344932.1;locus_tag=ACYKK2_001800;product=MerR family transcriptional regulator;pseudo=true;transl_table=11 DBLQKW010000079.1 tpg gene 2266 3156 . + . ID=gene-ACYKK2_001801;Name=ACYKK2_001801;end_range=3156,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001801;partial=true DBLQKW010000079.1 Protein Homology CDS 2266 3156 . + 0 ID=cds-HIH2232395.1;Parent=gene-ACYKK2_001801;Dbxref=NCBI_GP:HIH2232395.1;Name=HIH2232395.1;Ontology_term=GO:0007165;end_range=3156,.;gbkey=CDS;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015016418.1;locus_tag=ACYKK2_001801;partial=true;product=cache domain-containing protein;protein_id=HIH2232395.1;transl_table=11 ##sequence-region DBLQKW010000080.1 1 3148 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000080.1 tpg region 1 3148 . + . ID=DBLQKW010000080.1:1..3148;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000080.1 tpg gene 185 868 . + . ID=gene-ACYKK2_001802;Name=ACYKK2_001802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001802 DBLQKW010000080.1 Protein Homology CDS 185 868 . + 0 ID=cds-HIH2232396.1;Parent=gene-ACYKK2_001802;Dbxref=NCBI_GP:HIH2232396.1;Name=HIH2232396.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344162.1;locus_tag=ACYKK2_001802;product=TonB family protein;protein_id=HIH2232396.1;transl_table=11 DBLQKW010000080.1 tpg gene 960 1514 . - . ID=gene-ACYKK2_001803;Name=ACYKK2_001803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001803 DBLQKW010000080.1 Protein Homology CDS 960 1514 . - 0 ID=cds-HIH2232397.1;Parent=gene-ACYKK2_001803;Dbxref=NCBI_GP:HIH2232397.1;Name=HIH2232397.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002795935.1;locus_tag=ACYKK2_001803;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=HIH2232397.1;transl_table=11 DBLQKW010000080.1 tpg gene 1519 1770 . - . ID=gene-ACYKK2_001804;Name=ACYKK2_001804;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001804 DBLQKW010000080.1 Protein Homology CDS 1519 1770 . - 0 ID=cds-HIH2232398.1;Parent=gene-ACYKK2_001804;Dbxref=NCBI_GP:HIH2232398.1;Name=HIH2232398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002890613.1;locus_tag=ACYKK2_001804;product=transposase;protein_id=HIH2232398.1;transl_table=11 DBLQKW010000080.1 tpg pseudogene 2199 2293 . - . ID=gene-ACYKK2_001805;Name=ACYKK2_001805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001805;pseudo=true DBLQKW010000080.1 Protein Homology CDS 2199 2293 . - 0 ID=cds-ACYKK2_001805;Parent=gene-ACYKK2_001805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344161.1;locus_tag=ACYKK2_001805;product=hypothetical protein;pseudo=true;transl_table=11 DBLQKW010000080.1 tpg gene 2883 2999 . - . ID=gene-ACYKK2_001806;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=ACYKK2_001806 DBLQKW010000080.1 cmsearch rRNA 2883 2999 . - . ID=rna-ACYKK2_001806;Parent=gene-ACYKK2_001806;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKK2_001806;product=5S ribosomal RNA DBLQKW010000080.1 cmsearch exon 2883 2999 . - . ID=exon-ACYKK2_001806-1;Parent=rna-ACYKK2_001806;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKK2_001806;product=5S ribosomal RNA ##sequence-region DBLQKW010000081.1 1 3122 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000081.1 tpg region 1 3122 . + . ID=DBLQKW010000081.1:1..3122;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000081.1 tpg gene 1 695 . + . ID=gene-ACYKK2_001807;Name=ACYKK2_001807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001807;partial=true;start_range=.,1 DBLQKW010000081.1 Protein Homology CDS 1 695 . + 2 ID=cds-HIH2232399.1;Parent=gene-ACYKK2_001807;Dbxref=NCBI_GP:HIH2232399.1;Name=HIH2232399.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344653.1;locus_tag=ACYKK2_001807;partial=true;product=ArsS family sensor histidine kinase;protein_id=HIH2232399.1;start_range=.,1;transl_table=11 DBLQKW010000081.1 tpg gene 695 1267 . + . ID=gene-ACYKK2_001808;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=ACYKK2_001808 DBLQKW010000081.1 Protein Homology CDS 695 1267 . + 0 ID=cds-HIH2232400.1;Parent=gene-ACYKK2_001808;Dbxref=NCBI_GP:HIH2232400.1;Name=HIH2232400.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344654.1;locus_tag=ACYKK2_001808;product=recombination mediator RecR;protein_id=HIH2232400.1;transl_table=11 DBLQKW010000081.1 tpg gene 1264 1800 . - . ID=gene-ACYKK2_001809;Name=ACYKK2_001809;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001809 DBLQKW010000081.1 Protein Homology CDS 1264 1800 . - 0 ID=cds-HIH2232401.1;Parent=gene-ACYKK2_001809;Dbxref=NCBI_GP:HIH2232401.1;Name=HIH2232401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344655.1;locus_tag=ACYKK2_001809;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=HIH2232401.1;transl_table=11 DBLQKW010000081.1 tpg gene 1797 2489 . - . ID=gene-ACYKK2_001810;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=ACYKK2_001810 DBLQKW010000081.1 Protein Homology CDS 1797 2489 . - 0 ID=cds-HIH2232402.1;Parent=gene-ACYKK2_001810;Dbxref=NCBI_GP:HIH2232402.1;Name=HIH2232402.1;Ontology_term=GO:0022904,GO:0005506,GO:0009055,GO:0016020;gbkey=CDS;gene=cybH;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344656.1;locus_tag=ACYKK2_001810;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=HIH2232402.1;transl_table=11 DBLQKW010000081.1 tpg gene 2500 3122 . - . ID=gene-ACYKK2_001811;Name=ACYKK2_001811;end_range=3122,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001811;partial=true DBLQKW010000081.1 Protein Homology CDS 2500 3122 . - 2 ID=cds-HIH2232403.1;Parent=gene-ACYKK2_001811;Dbxref=NCBI_GP:HIH2232403.1;Name=HIH2232403.1;Ontology_term=GO:0016151;end_range=3122,.;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344657.1;locus_tag=ACYKK2_001811;partial=true;product=nickel-dependent hydrogenase large subunit;protein_id=HIH2232403.1;transl_table=11 ##sequence-region DBLQKW010000082.1 1 2632 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000082.1 tpg region 1 2632 . + . ID=DBLQKW010000082.1:1..2632;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000082.1 tpg gene 1 321 . + . ID=gene-ACYKK2_001812;Name=ACYKK2_001812;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001812;partial=true;start_range=.,1 DBLQKW010000082.1 Protein Homology CDS 1 321 . + 0 ID=cds-HIH2232404.1;Parent=gene-ACYKK2_001812;Dbxref=NCBI_GP:HIH2232404.1;Name=HIH2232404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344659.1;locus_tag=ACYKK2_001812;partial=true;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=HIH2232404.1;start_range=.,1;transl_table=11 DBLQKW010000082.1 tpg gene 441 1580 . + . ID=gene-ACYKK2_001813;Name=ACYKK2_001813;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001813 DBLQKW010000082.1 Protein Homology CDS 441 1580 . + 0 ID=cds-HIH2232405.1;Parent=gene-ACYKK2_001813;Dbxref=NCBI_GP:HIH2232405.1;Name=HIH2232405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344658.1;locus_tag=ACYKK2_001813;product=hydrogenase small subunit;protein_id=HIH2232405.1;transl_table=11 DBLQKW010000082.1 tpg gene 1583 2632 . + . ID=gene-ACYKK2_001814;Name=ACYKK2_001814;end_range=2632,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001814;partial=true DBLQKW010000082.1 Protein Homology CDS 1583 2632 . + 0 ID=cds-HIH2232406.1;Parent=gene-ACYKK2_001814;Dbxref=NCBI_GP:HIH2232406.1;Name=HIH2232406.1;Ontology_term=GO:0016151;end_range=2632,.;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344657.1;locus_tag=ACYKK2_001814;partial=true;product=nickel-dependent hydrogenase large subunit;protein_id=HIH2232406.1;transl_table=11 ##sequence-region DBLQKW010000083.1 1 2599 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000083.1 tpg region 1 2599 . + . ID=DBLQKW010000083.1:1..2599;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000083.1 tpg gene 1 892 . + . ID=gene-ACYKK2_001815;Name=ACYKK2_001815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001815;partial=true;start_range=.,1 DBLQKW010000083.1 Protein Homology CDS 1 892 . + 1 ID=cds-HIH2232407.1;Parent=gene-ACYKK2_001815;Dbxref=NCBI_GP:HIH2232407.1;Name=HIH2232407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344640.1;locus_tag=ACYKK2_001815;partial=true;product=hypothetical protein;protein_id=HIH2232407.1;start_range=.,1;transl_table=11 DBLQKW010000083.1 tpg gene 1132 2382 . + . ID=gene-ACYKK2_001816;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=ACYKK2_001816 DBLQKW010000083.1 Protein Homology CDS 1132 2382 . + 0 ID=cds-HIH2232408.1;Parent=gene-ACYKK2_001816;Dbxref=NCBI_GP:HIH2232408.1;Name=HIH2232408.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344641.1;locus_tag=ACYKK2_001816;product=phosphoribosylamine--glycine ligase;protein_id=HIH2232408.1;transl_table=11 DBLQKW010000083.1 tpg gene 2379 2599 . + . ID=gene-ACYKK2_001817;Name=ACYKK2_001817;end_range=2599,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001817;partial=true DBLQKW010000083.1 Protein Homology CDS 2379 2599 . + 0 ID=cds-HIH2232409.1;Parent=gene-ACYKK2_001817;Dbxref=NCBI_GP:HIH2232409.1;Name=HIH2232409.1;end_range=2599,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344642.1;locus_tag=ACYKK2_001817;partial=true;product=RDD family protein;protein_id=HIH2232409.1;transl_table=11 ##sequence-region DBLQKW010000084.1 1 2559 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000084.1 tpg region 1 2559 . + . ID=DBLQKW010000084.1:1..2559;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000084.1 tpg gene 1 790 . + . ID=gene-ACYKK2_001818;Name=ACYKK2_001818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001818;partial=true;start_range=.,1 DBLQKW010000084.1 Protein Homology CDS 1 790 . + 1 ID=cds-HIH2232410.1;Parent=gene-ACYKK2_001818;Dbxref=NCBI_GP:HIH2232410.1;Name=HIH2232410.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013882.6;locus_tag=ACYKK2_001818;partial=true;product=glycosyltransferase family 25 protein;protein_id=HIH2232410.1;start_range=.,1;transl_table=11 DBLQKW010000084.1 tpg gene 783 1739 . + . ID=gene-ACYKK2_001819;Name=wlaTB;gbkey=Gene;gene=wlaTB;gene_biotype=protein_coding;locus_tag=ACYKK2_001819 DBLQKW010000084.1 Protein Homology CDS 783 1739 . + 0 ID=cds-HIH2232411.1;Parent=gene-ACYKK2_001819;Dbxref=NCBI_GP:HIH2232411.1;Name=HIH2232411.1;gbkey=CDS;gene=wlaTB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002869613.1;locus_tag=ACYKK2_001819;product=class E lipooligosaccharide biosynthesis protein WlaTB;protein_id=HIH2232411.1;transl_table=11 DBLQKW010000084.1 tpg gene 1736 2559 . + . ID=gene-ACYKK2_001820;Name=wlaTC;end_range=2559,.;gbkey=Gene;gene=wlaTC;gene_biotype=protein_coding;locus_tag=ACYKK2_001820;partial=true DBLQKW010000084.1 Protein Homology CDS 1736 2559 . + 0 ID=cds-HIH2232412.1;Parent=gene-ACYKK2_001820;Dbxref=NCBI_GP:HIH2232412.1;Name=HIH2232412.1;end_range=2559,.;gbkey=CDS;gene=wlaTC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006735.1;locus_tag=ACYKK2_001820;partial=true;product=class E lipooligosaccharide biosynthesis protein WlaTC;protein_id=HIH2232412.1;transl_table=11 ##sequence-region DBLQKW010000085.1 1 2293 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000085.1 tpg region 1 2293 . + . ID=DBLQKW010000085.1:1..2293;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000085.1 tpg gene 45 1421 . + . ID=gene-ACYKK2_001821;Name=ACYKK2_001821;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001821 DBLQKW010000085.1 Protein Homology CDS 45 1421 . + 0 ID=cds-HIH2232413.1;Parent=gene-ACYKK2_001821;Dbxref=NCBI_GP:HIH2232413.1;Name=HIH2232413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343993.1;locus_tag=ACYKK2_001821;product=replicative DNA helicase;protein_id=HIH2232413.1;transl_table=11 DBLQKW010000085.1 tpg gene 1484 2086 . + . ID=gene-ACYKK2_001822;Name=ACYKK2_001822;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001822 DBLQKW010000085.1 Protein Homology CDS 1484 2086 . + 0 ID=cds-HIH2232414.1;Parent=gene-ACYKK2_001822;Dbxref=NCBI_GP:HIH2232414.1;Name=HIH2232414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343994.1;locus_tag=ACYKK2_001822;product=hypothetical protein;protein_id=HIH2232414.1;transl_table=11 DBLQKW010000085.1 tpg gene 2077 2283 . + . ID=gene-ACYKK2_001823;Name=ACYKK2_001823;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001823 DBLQKW010000085.1 Protein Homology CDS 2077 2283 . + 0 ID=cds-HIH2232415.1;Parent=gene-ACYKK2_001823;Dbxref=NCBI_GP:HIH2232415.1;Name=HIH2232415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343995.1;locus_tag=ACYKK2_001823;product=hypothetical protein;protein_id=HIH2232415.1;transl_table=11 ##sequence-region DBLQKW010000086.1 1 2286 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000086.1 tpg region 1 2286 . + . ID=DBLQKW010000086.1:1..2286;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000086.1 tpg gene 77 2269 . + . ID=gene-ACYKK2_001824;Name=ACYKK2_001824;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001824 DBLQKW010000086.1 Protein Homology CDS 77 2269 . + 0 ID=cds-HIH2232416.1;Parent=gene-ACYKK2_001824;Dbxref=NCBI_GP:HIH2232416.1;Name=HIH2232416.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019109223.1;locus_tag=ACYKK2_001824;product=DNA topoisomerase 3;protein_id=HIH2232416.1;transl_table=11 ##sequence-region DBLQKW010000087.1 1 2223 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000087.1 tpg region 1 2223 . + . ID=DBLQKW010000087.1:1..2223;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000087.1 tpg gene 1 1039 . + . ID=gene-ACYKK2_001825;Name=wlaRG;gbkey=Gene;gene=wlaRG;gene_biotype=protein_coding;locus_tag=ACYKK2_001825;partial=true;start_range=.,1 DBLQKW010000087.1 Protein Homology CDS 1 1039 . + 1 ID=cds-HIH2232417.1;Parent=gene-ACYKK2_001825;Dbxref=NCBI_GP:HIH2232417.1;Name=HIH2232417.1;gbkey=CDS;gene=wlaRG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032603539.1;locus_tag=ACYKK2_001825;partial=true;product=class E lipooligosaccharide biosynthesis aminotransferase WlaRG;protein_id=HIH2232417.1;start_range=.,1;transl_table=11 DBLQKW010000087.1 tpg gene 1071 2223 . - . ID=gene-ACYKK2_001826;Name=ACYKK2_001826;end_range=2223,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001826;partial=true DBLQKW010000087.1 Protein Homology CDS 1071 2223 . - 1 ID=cds-HIH2232418.1;Parent=gene-ACYKK2_001826;Dbxref=NCBI_GP:HIH2232418.1;Name=HIH2232418.1;end_range=2223,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002866158.1;locus_tag=ACYKK2_001826;partial=true;product=DUF2972 domain-containing protein;protein_id=HIH2232418.1;transl_table=11 ##sequence-region DBLQKW010000088.1 1 2131 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000088.1 tpg region 1 2131 . + . ID=DBLQKW010000088.1:1..2131;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000088.1 tpg gene 1 1182 . + . ID=gene-ACYKK2_001827;Name=ACYKK2_001827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001827;partial=true;start_range=.,1 DBLQKW010000088.1 Protein Homology CDS 1 1182 . + 0 ID=cds-HIH2232419.1;Parent=gene-ACYKK2_001827;Dbxref=NCBI_GP:HIH2232419.1;Name=HIH2232419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002782642.1;locus_tag=ACYKK2_001827;partial=true;product=AAA family ATPase;protein_id=HIH2232419.1;start_range=.,1;transl_table=11 DBLQKW010000088.1 tpg gene 1437 1643 . - . ID=gene-ACYKK2_001828;Name=ACYKK2_001828;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001828 DBLQKW010000088.1 Protein Homology CDS 1437 1643 . - 0 ID=cds-HIH2232420.1;Parent=gene-ACYKK2_001828;Dbxref=NCBI_GP:HIH2232420.1;Name=HIH2232420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002899137.1;locus_tag=ACYKK2_001828;product=XRE family transcriptional regulator;protein_id=HIH2232420.1;transl_table=11 DBLQKW010000088.1 tpg gene 1894 2131 . - . ID=gene-ACYKK2_001829;Name=ACYKK2_001829;end_range=2131,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001829;partial=true DBLQKW010000088.1 GeneMarkS-2+ CDS 1894 2131 . - 1 ID=cds-HIH2232421.1;Parent=gene-ACYKK2_001829;Dbxref=NCBI_GP:HIH2232421.1;Name=HIH2232421.1;end_range=2131,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001829;partial=true;product=hypothetical protein;protein_id=HIH2232421.1;transl_table=11 ##sequence-region DBLQKW010000089.1 1 2078 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000089.1 tpg region 1 2078 . + . ID=DBLQKW010000089.1:1..2078;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000089.1 tpg gene 126 758 . - . ID=gene-ACYKK2_001830;Name=ACYKK2_001830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001830 DBLQKW010000089.1 Protein Homology CDS 126 758 . - 0 ID=cds-HIH2232422.1;Parent=gene-ACYKK2_001830;Dbxref=NCBI_GP:HIH2232422.1;Name=HIH2232422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002881867.1;locus_tag=ACYKK2_001830;product=hypothetical protein;protein_id=HIH2232422.1;transl_table=11 DBLQKW010000089.1 tpg gene 758 1108 . - . ID=gene-ACYKK2_001831;Name=ACYKK2_001831;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001831 DBLQKW010000089.1 Protein Homology CDS 758 1108 . - 0 ID=cds-HIH2232423.1;Parent=gene-ACYKK2_001831;Dbxref=NCBI_GP:HIH2232423.1;Name=HIH2232423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814182.1;locus_tag=ACYKK2_001831;product=DUF4299 family protein;protein_id=HIH2232423.1;transl_table=11 DBLQKW010000089.1 tpg gene 1193 1759 . - . ID=gene-ACYKK2_001832;Name=ACYKK2_001832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001832 DBLQKW010000089.1 Protein Homology CDS 1193 1759 . - 0 ID=cds-HIH2232424.1;Parent=gene-ACYKK2_001832;Dbxref=NCBI_GP:HIH2232424.1;Name=HIH2232424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935909.1;locus_tag=ACYKK2_001832;product=imm11 family protein;protein_id=HIH2232424.1;transl_table=11 DBLQKW010000089.1 tpg gene 1759 2078 . - . ID=gene-ACYKK2_001833;Name=ACYKK2_001833;end_range=2078,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001833;partial=true DBLQKW010000089.1 Protein Homology CDS 1759 2078 . - 2 ID=cds-HIH2232425.1;Parent=gene-ACYKK2_001833;Dbxref=NCBI_GP:HIH2232425.1;Name=HIH2232425.1;end_range=2078,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002871576.1;locus_tag=ACYKK2_001833;partial=true;product=AHH domain-containing protein;protein_id=HIH2232425.1;transl_table=11 ##sequence-region DBLQKW010000090.1 1 2043 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000090.1 tpg region 1 2043 . + . ID=DBLQKW010000090.1:1..2043;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000090.1 tpg gene 46 1467 . + . ID=gene-ACYKK2_001834;Name=ACYKK2_001834;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001834 DBLQKW010000090.1 Protein Homology CDS 46 1467 . + 0 ID=cds-HIH2232426.1;Parent=gene-ACYKK2_001834;Dbxref=NCBI_GP:HIH2232426.1;Name=HIH2232426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002790581.1;locus_tag=ACYKK2_001834;product=hypothetical protein;protein_id=HIH2232426.1;transl_table=11 DBLQKW010000090.1 tpg gene 1486 1665 . + . ID=gene-ACYKK2_001835;Name=ACYKK2_001835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001835 DBLQKW010000090.1 GeneMarkS-2+ CDS 1486 1665 . + 0 ID=cds-HIH2232427.1;Parent=gene-ACYKK2_001835;Dbxref=NCBI_GP:HIH2232427.1;Name=HIH2232427.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001835;product=hypothetical protein;protein_id=HIH2232427.1;transl_table=11 ##sequence-region DBLQKW010000091.1 1 1942 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000091.1 tpg region 1 1942 . + . ID=DBLQKW010000091.1:1..1942;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000091.1 tpg gene 1 719 . + . ID=gene-ACYKK2_001836;Name=ACYKK2_001836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001836;partial=true;start_range=.,1 DBLQKW010000091.1 Protein Homology CDS 1 719 . + 2 ID=cds-HIH2232428.1;Parent=gene-ACYKK2_001836;Dbxref=NCBI_GP:HIH2232428.1;Name=HIH2232428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344650.1;locus_tag=ACYKK2_001836;partial=true;product=major outer membrane protein;protein_id=HIH2232428.1;start_range=.,1;transl_table=11 DBLQKW010000091.1 tpg gene 834 1942 . - . ID=gene-ACYKK2_001837;Name=dnaJ;end_range=1942,.;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=ACYKK2_001837;partial=true DBLQKW010000091.1 Protein Homology CDS 834 1942 . - 2 ID=cds-HIH2232429.1;Parent=gene-ACYKK2_001837;Dbxref=NCBI_GP:HIH2232429.1;Name=HIH2232429.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;end_range=1942,.;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344651.1;locus_tag=ACYKK2_001837;partial=true;product=molecular chaperone DnaJ;protein_id=HIH2232429.1;transl_table=11 ##sequence-region DBLQKW010000092.1 1 1941 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000092.1 tpg region 1 1941 . + . ID=DBLQKW010000092.1:1..1941;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000092.1 tpg gene 1 500 . + . ID=gene-ACYKK2_001838;Name=ACYKK2_001838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001838;partial=true;start_range=.,1 DBLQKW010000092.1 GeneMarkS-2+ CDS 1 500 . + 2 ID=cds-HIH2232430.1;Parent=gene-ACYKK2_001838;Dbxref=NCBI_GP:HIH2232430.1;Name=HIH2232430.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001838;partial=true;product=hypothetical protein;protein_id=HIH2232430.1;start_range=.,1;transl_table=11 DBLQKW010000092.1 tpg gene 490 876 . + . ID=gene-ACYKK2_001839;Name=ACYKK2_001839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001839 DBLQKW010000092.1 Protein Homology CDS 490 876 . + 0 ID=cds-HIH2232431.1;Parent=gene-ACYKK2_001839;Dbxref=NCBI_GP:HIH2232431.1;Name=HIH2232431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002883781.1;locus_tag=ACYKK2_001839;product=hypothetical protein;protein_id=HIH2232431.1;transl_table=11 DBLQKW010000092.1 tpg gene 891 1448 . + . ID=gene-ACYKK2_001840;Name=ACYKK2_001840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001840 DBLQKW010000092.1 Protein Homology CDS 891 1448 . + 0 ID=cds-HIH2232432.1;Parent=gene-ACYKK2_001840;Dbxref=NCBI_GP:HIH2232432.1;Name=HIH2232432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002873060.1;locus_tag=ACYKK2_001840;product=hypothetical protein;protein_id=HIH2232432.1;transl_table=11 DBLQKW010000092.1 tpg gene 1507 1941 . + . ID=gene-ACYKK2_001841;Name=ACYKK2_001841;end_range=1941,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001841;partial=true DBLQKW010000092.1 GeneMarkS-2+ CDS 1507 1941 . + 0 ID=cds-HIH2232433.1;Parent=gene-ACYKK2_001841;Dbxref=NCBI_GP:HIH2232433.1;Name=HIH2232433.1;end_range=1941,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001841;partial=true;product=hypothetical protein;protein_id=HIH2232433.1;transl_table=11 ##sequence-region DBLQKW010000093.1 1 1837 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000093.1 tpg region 1 1837 . + . ID=DBLQKW010000093.1:1..1837;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000093.1 tpg gene 1 1084 . - . ID=gene-ACYKK2_001842;Name=ACYKK2_001842;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001842;partial=true;start_range=.,1 DBLQKW010000093.1 Protein Homology CDS 1 1084 . - 0 ID=cds-HIH2232434.1;Parent=gene-ACYKK2_001842;Dbxref=NCBI_GP:HIH2232434.1;Name=HIH2232434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002869700.1;locus_tag=ACYKK2_001842;partial=true;product=hypothetical protein;protein_id=HIH2232434.1;start_range=.,1;transl_table=11 DBLQKW010000093.1 tpg gene 1136 1381 . - . ID=gene-ACYKK2_001843;Name=ACYKK2_001843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001843 DBLQKW010000093.1 Protein Homology CDS 1136 1381 . - 0 ID=cds-HIH2232435.1;Parent=gene-ACYKK2_001843;Dbxref=NCBI_GP:HIH2232435.1;Name=HIH2232435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002869699.1;locus_tag=ACYKK2_001843;product=hypothetical protein;protein_id=HIH2232435.1;transl_table=11 DBLQKW010000093.1 tpg gene 1392 1574 . - . ID=gene-ACYKK2_001844;Name=ACYKK2_001844;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001844 DBLQKW010000093.1 Protein Homology CDS 1392 1574 . - 0 ID=cds-HIH2232436.1;Parent=gene-ACYKK2_001844;Dbxref=NCBI_GP:HIH2232436.1;Name=HIH2232436.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002869698.1;locus_tag=ACYKK2_001844;product=helix-turn-helix domain-containing protein;protein_id=HIH2232436.1;transl_table=11 ##sequence-region DBLQKW010000094.1 1 1754 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000094.1 tpg region 1 1754 . + . ID=DBLQKW010000094.1:1..1754;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000094.1 tpg gene 1 1690 . + . ID=gene-ACYKK2_001845;Name=ACYKK2_001845;gbkey=Gene;gene_biotype=rRNA;locus_tag=ACYKK2_001845;partial=true;start_range=.,1 DBLQKW010000094.1 cmsearch rRNA 1 1690 . + . ID=rna-ACYKK2_001845;Parent=gene-ACYKK2_001845;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKK2_001845;partial=true;product=23S ribosomal RNA;start_range=.,1 DBLQKW010000094.1 cmsearch exon 1 1690 . + . ID=exon-ACYKK2_001845-1;Parent=rna-ACYKK2_001845;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKK2_001845;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region DBLQKW010000095.1 1 1632 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000095.1 tpg region 1 1632 . + . ID=DBLQKW010000095.1:1..1632;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000095.1 tpg gene 1 1205 . + . ID=gene-ACYKK2_001846;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=ACYKK2_001846;partial=true;start_range=.,1 DBLQKW010000095.1 Protein Homology CDS 1 1205 . + 2 ID=cds-HIH2232437.1;Parent=gene-ACYKK2_001846;Dbxref=NCBI_GP:HIH2232437.1;Name=HIH2232437.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344639.1;locus_tag=ACYKK2_001846;partial=true;product=glutamine-hydrolyzing GMP synthase;protein_id=HIH2232437.1;start_range=.,1;transl_table=11 DBLQKW010000095.1 tpg gene 1292 1632 . + . ID=gene-ACYKK2_001847;Name=ACYKK2_001847;end_range=1632,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001847;partial=true DBLQKW010000095.1 Protein Homology CDS 1292 1632 . + 0 ID=cds-HIH2232438.1;Parent=gene-ACYKK2_001847;Dbxref=NCBI_GP:HIH2232438.1;Name=HIH2232438.1;end_range=1632,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344640.1;locus_tag=ACYKK2_001847;partial=true;product=hypothetical protein;protein_id=HIH2232438.1;transl_table=11 ##sequence-region DBLQKW010000096.1 1 1567 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000096.1 tpg region 1 1567 . + . ID=DBLQKW010000096.1:1..1567;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000096.1 tpg gene 1 1567 . - . ID=gene-ACYKK2_001848;Name=ACYKK2_001848;end_range=1567,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001848;partial=true;start_range=.,1 DBLQKW010000096.1 Protein Homology CDS 1 1567 . - 0 ID=cds-HIH2232439.1;Parent=gene-ACYKK2_001848;Dbxref=NCBI_GP:HIH2232439.1;Name=HIH2232439.1;end_range=1567,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002861567.1;locus_tag=ACYKK2_001848;partial=true;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=HIH2232439.1;start_range=.,1;transl_table=11 ##sequence-region DBLQKW010000097.1 1 1537 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000097.1 tpg region 1 1537 . + . ID=DBLQKW010000097.1:1..1537;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000097.1 tpg gene 1 237 . + . ID=gene-ACYKK2_001849;Name=ACYKK2_001849;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001849;partial=true;start_range=.,1 DBLQKW010000097.1 Protein Homology CDS 1 237 . + 0 ID=cds-HIH2232440.1;Parent=gene-ACYKK2_001849;Dbxref=NCBI_GP:HIH2232440.1;Name=HIH2232440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344729.1;locus_tag=ACYKK2_001849;partial=true;product=motility associated factor glycosyltransferase family protein;protein_id=HIH2232440.1;start_range=.,1;transl_table=11 DBLQKW010000097.1 tpg gene 234 1537 . + . ID=gene-ACYKK2_001850;Name=ACYKK2_001850;end_range=1537,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001850;partial=true DBLQKW010000097.1 Protein Homology CDS 234 1537 . + 0 ID=cds-HIH2232441.1;Parent=gene-ACYKK2_001850;Dbxref=NCBI_GP:HIH2232441.1;Name=HIH2232441.1;end_range=1537,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344728.1;locus_tag=ACYKK2_001850;partial=true;product=motility associated factor glycosyltransferase family protein;protein_id=HIH2232441.1;transl_table=11 ##sequence-region DBLQKW010000098.1 1 1496 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000098.1 tpg region 1 1496 . + . ID=DBLQKW010000098.1:1..1496;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000098.1 tpg gene 1 1496 . + . ID=gene-ACYKK2_001851;Name=ACYKK2_001851;end_range=1496,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001851;partial=true;start_range=.,1 DBLQKW010000098.1 GeneMarkS-2+ CDS 1 1496 . + 1 ID=cds-HIH2232442.1;Parent=gene-ACYKK2_001851;Dbxref=NCBI_GP:HIH2232442.1;Name=HIH2232442.1;end_range=1496,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001851;partial=true;product=hypothetical protein;protein_id=HIH2232442.1;start_range=.,1;transl_table=11 ##sequence-region DBLQKW010000099.1 1 1453 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000099.1 tpg region 1 1453 . + . ID=DBLQKW010000099.1:1..1453;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000099.1 tpg pseudogene 99 1453 . + . ID=gene-ACYKK2_001852;Name=ACYKK2_001852;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001852;pseudo=true DBLQKW010000099.1 Protein Homology CDS 99 1453 . + 0 ID=cds-ACYKK2_001852;Parent=gene-ACYKK2_001852;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025639.6;locus_tag=ACYKK2_001852;product=PD-(D/E)XK nuclease family protein;pseudo=true;transl_table=11 ##sequence-region DBLQKW010000100.1 1 1387 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000100.1 tpg region 1 1387 . + . ID=DBLQKW010000100.1:1..1387;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000100.1 tpg gene 148 564 . - . ID=gene-ACYKK2_001853;Name=ACYKK2_001853;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001853 DBLQKW010000100.1 Protein Homology CDS 148 564 . - 0 ID=cds-HIH2232443.1;Parent=gene-ACYKK2_001853;Dbxref=NCBI_GP:HIH2232443.1;Name=HIH2232443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344995.1;locus_tag=ACYKK2_001853;product=PepSY-like domain-containing protein;protein_id=HIH2232443.1;transl_table=11 DBLQKW010000100.1 tpg gene 630 1373 . - . ID=gene-ACYKK2_001854;Name=ACYKK2_001854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001854 DBLQKW010000100.1 Protein Homology CDS 630 1373 . - 0 ID=cds-HIH2232444.1;Parent=gene-ACYKK2_001854;Dbxref=NCBI_GP:HIH2232444.1;Name=HIH2232444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344996.1;locus_tag=ACYKK2_001854;product=DUF4261 domain-containing protein;protein_id=HIH2232444.1;transl_table=11 ##sequence-region DBLQKW010000101.1 1 1349 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000101.1 tpg region 1 1349 . + . ID=DBLQKW010000101.1:1..1349;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000101.1 tpg gene 1 212 . - . ID=gene-ACYKK2_001855;Name=ACYKK2_001855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001855;partial=true;start_range=.,1 DBLQKW010000101.1 GeneMarkS-2+ CDS 1 212 . - 0 ID=cds-HIH2232445.1;Parent=gene-ACYKK2_001855;Dbxref=NCBI_GP:HIH2232445.1;Name=HIH2232445.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001855;partial=true;product=hypothetical protein;protein_id=HIH2232445.1;start_range=.,1;transl_table=11 DBLQKW010000101.1 tpg gene 216 1349 . - . ID=gene-ACYKK2_001856;Name=ACYKK2_001856;end_range=1349,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001856;partial=true DBLQKW010000101.1 GeneMarkS-2+ CDS 216 1349 . - 0 ID=cds-HIH2232446.1;Parent=gene-ACYKK2_001856;Dbxref=NCBI_GP:HIH2232446.1;Name=HIH2232446.1;end_range=1349,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001856;partial=true;product=hypothetical protein;protein_id=HIH2232446.1;transl_table=11 ##sequence-region DBLQKW010000102.1 1 1318 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000102.1 tpg region 1 1318 . + . ID=DBLQKW010000102.1:1..1318;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000102.1 tpg gene 83 1318 . - . ID=gene-ACYKK2_001857;Name=ACYKK2_001857;end_range=1318,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001857;partial=true DBLQKW010000102.1 Protein Homology CDS 83 1318 . - 0 ID=cds-HIH2232447.1;Parent=gene-ACYKK2_001857;Dbxref=NCBI_GP:HIH2232447.1;Name=HIH2232447.1;end_range=1318,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022634.6;locus_tag=ACYKK2_001857;partial=true;product=DUF2972 domain-containing protein;protein_id=HIH2232447.1;transl_table=11 ##sequence-region DBLQKW010000103.1 1 1288 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000103.1 tpg region 1 1288 . + . ID=DBLQKW010000103.1:1..1288;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000103.1 tpg gene 1 1288 . + . ID=gene-ACYKK2_001858;Name=ACYKK2_001858;end_range=1288,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001858;partial=true;start_range=.,1 DBLQKW010000103.1 Protein Homology CDS 1 1288 . + 2 ID=cds-HIH2232448.1;Parent=gene-ACYKK2_001858;Dbxref=NCBI_GP:HIH2232448.1;Name=HIH2232448.1;end_range=1288,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002782092.1;locus_tag=ACYKK2_001858;partial=true;product=hypothetical protein;protein_id=HIH2232448.1;start_range=.,1;transl_table=11 ##sequence-region DBLQKW010000104.1 1 1220 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000104.1 tpg region 1 1220 . + . ID=DBLQKW010000104.1:1..1220;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000104.1 tpg gene 28 1220 . + . ID=gene-ACYKK2_001859;Name=ACYKK2_001859;end_range=1220,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001859;partial=true DBLQKW010000104.1 GeneMarkS-2+ CDS 28 1220 . + 0 ID=cds-HIH2232449.1;Parent=gene-ACYKK2_001859;Dbxref=NCBI_GP:HIH2232449.1;Name=HIH2232449.1;end_range=1220,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001859;partial=true;product=hypothetical protein;protein_id=HIH2232449.1;transl_table=11 ##sequence-region DBLQKW010000105.1 1 1212 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000105.1 tpg region 1 1212 . + . ID=DBLQKW010000105.1:1..1212;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000105.1 tpg gene 1 498 . - . ID=gene-ACYKK2_001860;Name=ACYKK2_001860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001860;partial=true;start_range=.,1 DBLQKW010000105.1 Protein Homology CDS 1 498 . - 0 ID=cds-HIH2232450.1;Parent=gene-ACYKK2_001860;Dbxref=NCBI_GP:HIH2232450.1;Name=HIH2232450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344653.1;locus_tag=ACYKK2_001860;partial=true;product=ArsS family sensor histidine kinase;protein_id=HIH2232450.1;start_range=.,1;transl_table=11 DBLQKW010000105.1 tpg gene 495 1166 . - . ID=gene-ACYKK2_001861;Name=racR;gbkey=Gene;gene=racR;gene_biotype=protein_coding;locus_tag=ACYKK2_001861 DBLQKW010000105.1 Protein Homology CDS 495 1166 . - 0 ID=cds-HIH2232451.1;Parent=gene-ACYKK2_001861;Dbxref=NCBI_GP:HIH2232451.1;Name=HIH2232451.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;gene=racR;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344652.1;locus_tag=ACYKK2_001861;product=response regulator transcription factor;protein_id=HIH2232451.1;transl_table=11 ##sequence-region DBLQKW010000106.1 1 1117 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000106.1 tpg region 1 1117 . + . ID=DBLQKW010000106.1:1..1117;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000106.1 tpg gene 1 691 . + . ID=gene-ACYKK2_001862;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=ACYKK2_001862;partial=true;start_range=.,1 DBLQKW010000106.1 Protein Homology CDS 1 691 . + 1 ID=cds-HIH2232452.1;Parent=gene-ACYKK2_001862;Dbxref=NCBI_GP:HIH2232452.1;Name=HIH2232452.1;Ontology_term=GO:0009152,GO:0003922,GO:0005524;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344639.1;locus_tag=ACYKK2_001862;partial=true;product=glutamine-hydrolyzing GMP synthase;protein_id=HIH2232452.1;start_range=.,1;transl_table=11 DBLQKW010000106.1 tpg gene 777 1117 . + . ID=gene-ACYKK2_001863;Name=ACYKK2_001863;end_range=1117,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001863;partial=true DBLQKW010000106.1 Protein Homology CDS 777 1117 . + 0 ID=cds-HIH2232453.1;Parent=gene-ACYKK2_001863;Dbxref=NCBI_GP:HIH2232453.1;Name=HIH2232453.1;end_range=1117,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344640.1;locus_tag=ACYKK2_001863;partial=true;product=hypothetical protein;protein_id=HIH2232453.1;transl_table=11 ##sequence-region DBLQKW010000107.1 1 1105 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000107.1 tpg region 1 1105 . + . ID=DBLQKW010000107.1:1..1105;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000107.1 tpg gene 16 1038 . + . ID=gene-ACYKK2_001864;Name=ACYKK2_001864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001864 DBLQKW010000107.1 Protein Homology CDS 16 1038 . + 0 ID=cds-HIH2232454.1;Parent=gene-ACYKK2_001864;Dbxref=NCBI_GP:HIH2232454.1;Name=HIH2232454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002891861.1;locus_tag=ACYKK2_001864;product=hypothetical protein;protein_id=HIH2232454.1;transl_table=11 ##sequence-region DBLQKW010000108.1 1 1037 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000108.1 tpg region 1 1037 . + . ID=DBLQKW010000108.1:1..1037;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000108.1 tpg gene 1 1037 . + . ID=gene-ACYKK2_001865;Name=ACYKK2_001865;end_range=1037,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001865;partial=true;start_range=.,1 DBLQKW010000108.1 Protein Homology CDS 1 1037 . + 2 ID=cds-HIH2232455.1;Parent=gene-ACYKK2_001865;Dbxref=NCBI_GP:HIH2232455.1;Name=HIH2232455.1;Ontology_term=GO:0006935;end_range=1037,.;gbkey=CDS;go_process=chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344933.1;locus_tag=ACYKK2_001865;partial=true;product=methyl-accepting chemotaxis protein;protein_id=HIH2232455.1;start_range=.,1;transl_table=11 ##sequence-region DBLQKW010000109.1 1 1015 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000109.1 tpg region 1 1015 . + . ID=DBLQKW010000109.1:1..1015;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000109.1 tpg gene 9 368 . + . ID=gene-ACYKK2_001866;Name=ACYKK2_001866;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001866 DBLQKW010000109.1 Protein Homology CDS 9 368 . + 0 ID=cds-HIH2232456.1;Parent=gene-ACYKK2_001866;Dbxref=NCBI_GP:HIH2232456.1;Name=HIH2232456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344505.1;locus_tag=ACYKK2_001866;product=methionine-R-sulfoxide reductase;protein_id=HIH2232456.1;transl_table=11 DBLQKW010000109.1 tpg gene 383 1009 . + . ID=gene-ACYKK2_001867;Name=ACYKK2_001867;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001867 DBLQKW010000109.1 Protein Homology CDS 383 1009 . + 0 ID=cds-HIH2232457.1;Parent=gene-ACYKK2_001867;Dbxref=NCBI_GP:HIH2232457.1;Name=HIH2232457.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344504.1;locus_tag=ACYKK2_001867;product=MarC family protein;protein_id=HIH2232457.1;transl_table=11 ##sequence-region DBLQKW010000110.1 1 1014 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000110.1 tpg region 1 1014 . + . ID=DBLQKW010000110.1:1..1014;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000110.1 tpg gene 1 463 . - . ID=gene-ACYKK2_001868;Name=ACYKK2_001868;gbkey=Gene;gene_biotype=rRNA;locus_tag=ACYKK2_001868;partial=true;start_range=.,1 DBLQKW010000110.1 cmsearch rRNA 1 463 . - . ID=rna-ACYKK2_001868;Parent=gene-ACYKK2_001868;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKK2_001868;partial=true;product=23S ribosomal RNA;start_range=.,1 DBLQKW010000110.1 cmsearch exon 1 463 . - . ID=exon-ACYKK2_001868-1;Parent=rna-ACYKK2_001868;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKK2_001868;partial=true;product=23S ribosomal RNA;start_range=.,1 DBLQKW010000110.1 tpg gene 634 1014 . - . ID=gene-ACYKK2_001869;Name=ACYKK2_001869;end_range=1014,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=ACYKK2_001869;partial=true DBLQKW010000110.1 cmsearch rRNA 634 1014 . - . ID=rna-ACYKK2_001869;Parent=gene-ACYKK2_001869;Dbxref=RFAM:RF00177;end_range=1014,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKK2_001869;partial=true;product=16S ribosomal RNA DBLQKW010000110.1 cmsearch exon 634 1014 . - . ID=exon-ACYKK2_001869-1;Parent=rna-ACYKK2_001869;Dbxref=RFAM:RF00177;end_range=1014,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=ACYKK2_001869;partial=true;product=16S ribosomal RNA ##sequence-region DBLQKW010000111.1 1 978 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000111.1 tpg region 1 978 . + . ID=DBLQKW010000111.1:1..978;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000111.1 tpg gene 1 900 . - . ID=gene-ACYKK2_001870;Name=ACYKK2_001870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001870;partial=true;start_range=.,1 DBLQKW010000111.1 Protein Homology CDS 1 900 . - 0 ID=cds-HIH2232458.1;Parent=gene-ACYKK2_001870;Dbxref=NCBI_GP:HIH2232458.1;Name=HIH2232458.1;Ontology_term=GO:0007165;gbkey=CDS;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343604.1;locus_tag=ACYKK2_001870;partial=true;product=cache domain-containing protein;protein_id=HIH2232458.1;start_range=.,1;transl_table=11 ##sequence-region DBLQKW010000112.1 1 976 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000112.1 tpg region 1 976 . + . ID=DBLQKW010000112.1:1..976;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000112.1 tpg gene 44 454 . + . ID=gene-ACYKK2_001871;Name=perR;gbkey=Gene;gene=perR;gene_biotype=protein_coding;locus_tag=ACYKK2_001871 DBLQKW010000112.1 Protein Homology CDS 44 454 . + 0 ID=cds-HIH2232459.1;Parent=gene-ACYKK2_001871;Dbxref=NCBI_GP:HIH2232459.1;Name=HIH2232459.1;gbkey=CDS;gene=perR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343760.1;locus_tag=ACYKK2_001871;product=peroxide-responsive transcriptional repressor PerR;protein_id=HIH2232459.1;transl_table=11 DBLQKW010000112.1 tpg gene 500 976 . + . ID=gene-ACYKK2_001872;Name=ACYKK2_001872;end_range=976,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001872;partial=true DBLQKW010000112.1 Protein Homology CDS 500 976 . + 0 ID=cds-HIH2232460.1;Parent=gene-ACYKK2_001872;Dbxref=NCBI_GP:HIH2232460.1;Name=HIH2232460.1;end_range=976,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343761.1;locus_tag=ACYKK2_001872;partial=true;product=hypothetical protein;protein_id=HIH2232460.1;transl_table=11 ##sequence-region DBLQKW010000113.1 1 929 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000113.1 tpg region 1 929 . + . ID=DBLQKW010000113.1:1..929;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000113.1 tpg gene 27 929 . + . ID=gene-ACYKK2_001873;Name=ACYKK2_001873;end_range=929,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001873;partial=true DBLQKW010000113.1 GeneMarkS-2+ CDS 27 929 . + 0 ID=cds-HIH2232461.1;Parent=gene-ACYKK2_001873;Dbxref=NCBI_GP:HIH2232461.1;Name=HIH2232461.1;end_range=929,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001873;partial=true;product=hypothetical protein;protein_id=HIH2232461.1;transl_table=11 ##sequence-region DBLQKW010000114.1 1 925 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000114.1 tpg region 1 925 . + . ID=DBLQKW010000114.1:1..925;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000114.1 tpg gene 1 423 . + . ID=gene-ACYKK2_001874;Name=ACYKK2_001874;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001874;partial=true;start_range=.,1 DBLQKW010000114.1 Protein Homology CDS 1 423 . + 0 ID=cds-HIH2232462.1;Parent=gene-ACYKK2_001874;Dbxref=NCBI_GP:HIH2232462.1;Name=HIH2232462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344084.1;locus_tag=ACYKK2_001874;partial=true;product=hypothetical protein;protein_id=HIH2232462.1;start_range=.,1;transl_table=11 DBLQKW010000114.1 tpg gene 416 925 . + . ID=gene-ACYKK2_001875;Name=ACYKK2_001875;end_range=925,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001875;partial=true DBLQKW010000114.1 Protein Homology CDS 416 925 . + 0 ID=cds-HIH2232463.1;Parent=gene-ACYKK2_001875;Dbxref=NCBI_GP:HIH2232463.1;Name=HIH2232463.1;end_range=925,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344083.1;locus_tag=ACYKK2_001875;partial=true;product=hypothetical protein;protein_id=HIH2232463.1;transl_table=11 ##sequence-region DBLQKW010000115.1 1 867 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000115.1 tpg region 1 867 . + . ID=DBLQKW010000115.1:1..867;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000115.1 tpg pseudogene 1 867 . - . ID=gene-ACYKK2_001876;Name=ACYKK2_001876;gbkey=Gene;gene_biotype=pseudogene;locus_tag=ACYKK2_001876;pseudo=true DBLQKW010000115.1 Protein Homology CDS 1 867 . - 2 ID=cds-ACYKK2_001876;Parent=gene-ACYKK2_001876;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344695.1;locus_tag=ACYKK2_001876;product=DUF2920 family protein;pseudo=true;transl_table=11 ##sequence-region DBLQKW010000116.1 1 833 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000116.1 tpg region 1 833 . + . ID=DBLQKW010000116.1:1..833;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000116.1 tpg gene 12 833 . + . ID=gene-ACYKK2_001877;Name=ACYKK2_001877;end_range=833,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001877;partial=true DBLQKW010000116.1 Protein Homology CDS 12 833 . + 0 ID=cds-HIH2232464.1;Parent=gene-ACYKK2_001877;Dbxref=NCBI_GP:HIH2232464.1;Name=HIH2232464.1;end_range=833,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019109180.1;locus_tag=ACYKK2_001877;partial=true;product=DUF2972 domain-containing protein;protein_id=HIH2232464.1;transl_table=11 ##sequence-region DBLQKW010000117.1 1 799 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000117.1 tpg region 1 799 . + . ID=DBLQKW010000117.1:1..799;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000117.1 tpg gene 86 799 . + . ID=gene-ACYKK2_001878;Name=ACYKK2_001878;end_range=799,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001878;partial=true DBLQKW010000117.1 GeneMarkS-2+ CDS 86 799 . + 0 ID=cds-HIH2232465.1;Parent=gene-ACYKK2_001878;Dbxref=NCBI_GP:HIH2232465.1;Name=HIH2232465.1;end_range=799,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001878;partial=true;product=hypothetical protein;protein_id=HIH2232465.1;transl_table=11 ##sequence-region DBLQKW010000118.1 1 699 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000118.1 tpg region 1 699 . + . ID=DBLQKW010000118.1:1..699;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000118.1 tpg gene 1 699 . - . ID=gene-ACYKK2_001879;Name=ACYKK2_001879;end_range=699,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001879;partial=true;start_range=.,1 DBLQKW010000118.1 Protein Homology CDS 1 699 . - 0 ID=cds-HIH2232466.1;Parent=gene-ACYKK2_001879;Dbxref=NCBI_GP:HIH2232466.1;Name=HIH2232466.1;end_range=699,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344727.1;locus_tag=ACYKK2_001879;partial=true;product=flagellin hook IN motif-containing protein;protein_id=HIH2232466.1;start_range=.,1;transl_table=11 ##sequence-region DBLQKW010000119.1 1 616 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000119.1 tpg region 1 616 . + . ID=DBLQKW010000119.1:1..616;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000119.1 tpg gene 1 616 . - . ID=gene-ACYKK2_001880;Name=tet(O);end_range=616,.;gbkey=Gene;gene=tet(O);gene_biotype=protein_coding;locus_tag=ACYKK2_001880;partial=true;start_range=.,1 DBLQKW010000119.1 Protein Homology CDS 1 616 . - 0 ID=cds-HIH2232467.1;Parent=gene-ACYKK2_001880;Dbxref=NCBI_GP:HIH2232467.1;Name=HIH2232467.1;end_range=616,.;gbkey=CDS;gene=tet(O);inference=COORDINATES: similar to AA sequence:RefSeq:WP_032490535.1;locus_tag=ACYKK2_001880;partial=true;product=tetracycline resistance ribosomal protection protein Tet(O);protein_id=HIH2232467.1;start_range=.,1;transl_table=11 ##sequence-region DBLQKW010000120.1 1 548 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000120.1 tpg region 1 548 . + . ID=DBLQKW010000120.1:1..548;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000120.1 tpg gene 1 213 . - . ID=gene-ACYKK2_001881;Name=ACYKK2_001881;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001881;partial=true;start_range=.,1 DBLQKW010000120.1 Protein Homology CDS 1 213 . - 0 ID=cds-HIH2232468.1;Parent=gene-ACYKK2_001881;Dbxref=NCBI_GP:HIH2232468.1;Name=HIH2232468.1;Note=FlaA%3B structural flagella protein%3B in Helicobacter the flagella are composed of flagellin A and flagellin B%3B the amounts of each seem to be controlled by environmental conditions;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344726.1;locus_tag=ACYKK2_001881;partial=true;product=flagellin;protein_id=HIH2232468.1;start_range=.,1;transl_table=11 DBLQKW010000120.1 tpg gene 358 548 . - . ID=gene-ACYKK2_001882;Name=ACYKK2_001882;end_range=548,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001882;partial=true DBLQKW010000120.1 Protein Homology CDS 358 548 . - 2 ID=cds-HIH2232469.1;Parent=gene-ACYKK2_001882;Dbxref=NCBI_GP:HIH2232469.1;Name=HIH2232469.1;Ontology_term=GO:0071973,GO:0005198;end_range=548,.;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344727.1;locus_tag=ACYKK2_001882;partial=true;product=flagellin;protein_id=HIH2232469.1;transl_table=11 ##sequence-region DBLQKW010000121.1 1 534 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000121.1 tpg region 1 534 . + . ID=DBLQKW010000121.1:1..534;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000121.1 tpg gene 1 534 . + . ID=gene-ACYKK2_001883;Name=ACYKK2_001883;end_range=534,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001883;partial=true;start_range=.,1 DBLQKW010000121.1 Protein Homology CDS 1 534 . + 1 ID=cds-HIH2232470.1;Parent=gene-ACYKK2_001883;Dbxref=NCBI_GP:HIH2232470.1;Name=HIH2232470.1;end_range=534,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344640.1;locus_tag=ACYKK2_001883;partial=true;product=hypothetical protein;protein_id=HIH2232470.1;start_range=.,1;transl_table=11 ##sequence-region DBLQKW010000122.1 1 531 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000122.1 tpg region 1 531 . + . ID=DBLQKW010000122.1:1..531;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000122.1 tpg gene 1 213 . - . ID=gene-ACYKK2_001884;Name=ACYKK2_001884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001884;partial=true;start_range=.,1 DBLQKW010000122.1 Protein Homology CDS 1 213 . - 0 ID=cds-HIH2232471.1;Parent=gene-ACYKK2_001884;Dbxref=NCBI_GP:HIH2232471.1;Name=HIH2232471.1;Note=FlaA%3B structural flagella protein%3B in Helicobacter the flagella are composed of flagellin A and flagellin B%3B the amounts of each seem to be controlled by environmental conditions;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344727.1;locus_tag=ACYKK2_001884;partial=true;product=flagellin;protein_id=HIH2232471.1;start_range=.,1;transl_table=11 DBLQKW010000122.1 tpg gene 310 531 . - . ID=gene-ACYKK2_001885;Name=ACYKK2_001885;end_range=531,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001885;partial=true DBLQKW010000122.1 Protein Homology CDS 310 531 . - 0 ID=cds-HIH2232472.1;Parent=gene-ACYKK2_001885;Dbxref=NCBI_GP:HIH2232472.1;Name=HIH2232472.1;end_range=531,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344728.1;locus_tag=ACYKK2_001885;partial=true;product=motility associated factor glycosyltransferase family protein;protein_id=HIH2232472.1;transl_table=11 ##sequence-region DBLQKW010000123.1 1 483 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000123.1 tpg region 1 483 . + . ID=DBLQKW010000123.1:1..483;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000123.1 tpg gene 1 483 . - . ID=gene-ACYKK2_001886;Name=ACYKK2_001886;end_range=483,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001886;partial=true;start_range=.,1 DBLQKW010000123.1 Protein Homology CDS 1 483 . - 1 ID=cds-HIH2232473.1;Parent=gene-ACYKK2_001886;Dbxref=NCBI_GP:HIH2232473.1;Name=HIH2232473.1;end_range=483,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032490535.1;locus_tag=ACYKK2_001886;partial=true;product=tetracycline resistance ribosomal protection protein Tet(32);protein_id=HIH2232473.1;start_range=.,1;transl_table=11 ##sequence-region DBLQKW010000124.1 1 483 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000124.1 tpg region 1 483 . + . ID=DBLQKW010000124.1:1..483;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000124.1 tpg gene 1 483 . - . ID=gene-ACYKK2_001887;Name=tet(O);end_range=483,.;gbkey=Gene;gene=tet(O);gene_biotype=protein_coding;locus_tag=ACYKK2_001887;partial=true;start_range=.,1 DBLQKW010000124.1 Protein Homology CDS 1 483 . - 1 ID=cds-HIH2232474.1;Parent=gene-ACYKK2_001887;Dbxref=NCBI_GP:HIH2232474.1;Name=HIH2232474.1;end_range=483,.;gbkey=CDS;gene=tet(O);inference=COORDINATES: similar to AA sequence:RefSeq:WP_032490535.1;locus_tag=ACYKK2_001887;partial=true;product=tetracycline resistance ribosomal protection protein Tet(O);protein_id=HIH2232474.1;start_range=.,1;transl_table=11 ##sequence-region DBLQKW010000125.1 1 470 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000125.1 tpg region 1 470 . + . ID=DBLQKW010000125.1:1..470;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000125.1 tpg gene 1 470 . + . ID=gene-ACYKK2_001888;Name=ACYKK2_001888;end_range=470,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001888;partial=true;start_range=.,1 DBLQKW010000125.1 GeneMarkS-2+ CDS 1 470 . + 2 ID=cds-HIH2232475.1;Parent=gene-ACYKK2_001888;Dbxref=NCBI_GP:HIH2232475.1;Name=HIH2232475.1;end_range=470,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001888;partial=true;product=hypothetical protein;protein_id=HIH2232475.1;start_range=.,1;transl_table=11 ##sequence-region DBLQKW010000126.1 1 449 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000126.1 tpg region 1 449 . + . ID=DBLQKW010000126.1:1..449;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000126.1 tpg gene 1 449 . + . ID=gene-ACYKK2_001889;Name=ACYKK2_001889;end_range=449,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001889;partial=true;start_range=.,1 DBLQKW010000126.1 Protein Homology CDS 1 449 . + 0 ID=cds-HIH2232476.1;Parent=gene-ACYKK2_001889;Dbxref=NCBI_GP:HIH2232476.1;Name=HIH2232476.1;end_range=449,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344804.1;locus_tag=ACYKK2_001889;partial=true;product=DUF2972 domain-containing protein;protein_id=HIH2232476.1;start_range=.,1;transl_table=11 ##sequence-region DBLQKW010000127.1 1 437 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000127.1 tpg region 1 437 . + . ID=DBLQKW010000127.1:1..437;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000127.1 tpg gene 1 437 . + . ID=gene-ACYKK2_001890;Name=ACYKK2_001890;end_range=437,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001890;partial=true;start_range=.,1 DBLQKW010000127.1 Protein Homology CDS 1 437 . + 0 ID=cds-HIH2232477.1;Parent=gene-ACYKK2_001890;Dbxref=NCBI_GP:HIH2232477.1;Name=HIH2232477.1;end_range=437,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032490535.1;locus_tag=ACYKK2_001890;partial=true;product=tetracycline resistance ribosomal protection protein Tet(O);protein_id=HIH2232477.1;start_range=.,1;transl_table=11 ##sequence-region DBLQKW010000128.1 1 413 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000128.1 tpg region 1 413 . + . ID=DBLQKW010000128.1:1..413;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000128.1 tpg gene 1 107 . - . ID=gene-ACYKK2_001891;Name=ACYKK2_001891;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001891;partial=true;start_range=.,1 DBLQKW010000128.1 Protein Homology CDS 1 107 . - 0 ID=cds-HIH2232478.1;Parent=gene-ACYKK2_001891;Dbxref=NCBI_GP:HIH2232478.1;Name=HIH2232478.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025568.6;locus_tag=ACYKK2_001891;partial=true;product=cysteine-rich KTR domain-containing protein;protein_id=HIH2232478.1;start_range=.,1;transl_table=11 DBLQKW010000128.1 tpg gene 159 413 . - . ID=gene-ACYKK2_001892;Name=ACYKK2_001892;end_range=413,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001892;partial=true DBLQKW010000128.1 Protein Homology CDS 159 413 . - 0 ID=cds-HIH2232479.1;Parent=gene-ACYKK2_001892;Dbxref=NCBI_GP:HIH2232479.1;Name=HIH2232479.1;end_range=413,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032490535.1;locus_tag=ACYKK2_001892;partial=true;product=tetracycline resistance ribosomal protection protein Tet(O);protein_id=HIH2232479.1;transl_table=11 ##sequence-region DBLQKW010000129.1 1 373 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000129.1 tpg region 1 373 . + . ID=DBLQKW010000129.1:1..373;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000129.1 tpg gene 1 373 . + . ID=gene-ACYKK2_001893;Name=ACYKK2_001893;end_range=373,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001893;partial=true;start_range=.,1 DBLQKW010000129.1 Protein Homology CDS 1 373 . + 0 ID=cds-HIH2232480.1;Parent=gene-ACYKK2_001893;Dbxref=NCBI_GP:HIH2232480.1;Name=HIH2232480.1;end_range=373,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002790984.1;locus_tag=ACYKK2_001893;partial=true;product=hypothetical protein;protein_id=HIH2232480.1;start_range=.,1;transl_table=11 ##sequence-region DBLQKW010000130.1 1 363 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000130.1 tpg region 1 363 . + . ID=DBLQKW010000130.1:1..363;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000130.1 tpg gene 5 80 . - . ID=gene-ACYKK2_001894;Name=ACYKK2_001894;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_001894 DBLQKW010000130.1 tRNAscan-SE tRNA 5 80 . - . ID=rna-ACYKK2_001894;Parent=gene-ACYKK2_001894;anticodon=(pos:complement(45..47));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001894;product=tRNA-Arg DBLQKW010000130.1 tRNAscan-SE exon 5 80 . - . ID=exon-ACYKK2_001894-1;Parent=rna-ACYKK2_001894;anticodon=(pos:complement(45..47));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001894;product=tRNA-Arg DBLQKW010000130.1 tpg gene 100 175 . - . ID=gene-ACYKK2_001895;Name=ACYKK2_001895;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_001895 DBLQKW010000130.1 tRNAscan-SE tRNA 100 175 . - . ID=rna-ACYKK2_001895;Parent=gene-ACYKK2_001895;anticodon=(pos:complement(140..142));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001895;product=tRNA-Lys DBLQKW010000130.1 tRNAscan-SE exon 100 175 . - . ID=exon-ACYKK2_001895-1;Parent=rna-ACYKK2_001895;anticodon=(pos:complement(140..142));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001895;product=tRNA-Lys DBLQKW010000130.1 tpg gene 180 256 . - . ID=gene-ACYKK2_001896;Name=ACYKK2_001896;gbkey=Gene;gene_biotype=tRNA;locus_tag=ACYKK2_001896 DBLQKW010000130.1 tRNAscan-SE tRNA 180 256 . - . ID=rna-ACYKK2_001896;Parent=gene-ACYKK2_001896;anticodon=(pos:complement(220..222));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001896;product=tRNA-Asp DBLQKW010000130.1 tRNAscan-SE exon 180 256 . - . ID=exon-ACYKK2_001896-1;Parent=rna-ACYKK2_001896;anticodon=(pos:complement(220..222));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=ACYKK2_001896;product=tRNA-Asp ##sequence-region DBLQKW010000131.1 1 357 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000131.1 tpg region 1 357 . + . ID=DBLQKW010000131.1:1..357;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000131.1 tpg gene 1 357 . - . ID=gene-ACYKK2_001897;Name=ACYKK2_001897;end_range=357,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001897;partial=true;start_range=.,1 DBLQKW010000131.1 Protein Homology CDS 1 357 . - 2 ID=cds-HIH2232481.1;Parent=gene-ACYKK2_001897;Dbxref=NCBI_GP:HIH2232481.1;Name=HIH2232481.1;end_range=357,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344643.1;locus_tag=ACYKK2_001897;partial=true;product=LPS-assembly protein LptD;protein_id=HIH2232481.1;start_range=.,1;transl_table=11 ##sequence-region DBLQKW010000132.1 1 288 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000132.1 tpg region 1 288 . + . ID=DBLQKW010000132.1:1..288;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000132.1 tpg gene 73 288 . + . ID=gene-ACYKK2_001898;Name=ACYKK2_001898;end_range=288,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001898;partial=true DBLQKW010000132.1 GeneMarkS-2+ CDS 73 288 . + 0 ID=cds-HIH2232482.1;Parent=gene-ACYKK2_001898;Dbxref=NCBI_GP:HIH2232482.1;Name=HIH2232482.1;end_range=288,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=ACYKK2_001898;partial=true;product=glycosyltransferase family 2 protein;protein_id=HIH2232482.1;transl_table=11 ##sequence-region DBLQKW010000133.1 1 267 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000133.1 tpg region 1 267 . + . ID=DBLQKW010000133.1:1..267;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000133.1 tpg gene 1 267 . - . ID=gene-ACYKK2_001899;Name=ACYKK2_001899;end_range=267,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001899;partial=true;start_range=.,1 DBLQKW010000133.1 Protein Homology CDS 1 267 . - 0 ID=cds-HIH2232483.1;Parent=gene-ACYKK2_001899;Dbxref=NCBI_GP:HIH2232483.1;Name=HIH2232483.1;end_range=267,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344643.1;locus_tag=ACYKK2_001899;partial=true;product=LPS-assembly protein LptD;protein_id=HIH2232483.1;start_range=.,1;transl_table=11 ##sequence-region DBLQKW010000134.1 1 254 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000134.1 tpg region 1 254 . + . ID=DBLQKW010000134.1:1..254;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000134.1 tpg gene 1 254 . - . ID=gene-ACYKK2_001900;Name=ACYKK2_001900;end_range=254,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001900;partial=true;start_range=.,1 DBLQKW010000134.1 Protein Homology CDS 1 254 . - 0 ID=cds-HIH2232484.1;Parent=gene-ACYKK2_001900;Dbxref=NCBI_GP:HIH2232484.1;Name=HIH2232484.1;end_range=254,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002782092.1;locus_tag=ACYKK2_001900;partial=true;product=hypothetical protein;protein_id=HIH2232484.1;start_range=.,1;transl_table=11 ##sequence-region DBLQKW010000135.1 1 251 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000135.1 tpg region 1 251 . + . ID=DBLQKW010000135.1:1..251;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000135.1 tpg gene 1 251 . + . ID=gene-ACYKK2_001901;Name=ACYKK2_001901;end_range=251,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001901;partial=true;start_range=.,1 DBLQKW010000135.1 Protein Homology CDS 1 251 . + 0 ID=cds-HIH2232485.1;Parent=gene-ACYKK2_001901;Dbxref=NCBI_GP:HIH2232485.1;Name=HIH2232485.1;end_range=251,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344729.1;locus_tag=ACYKK2_001901;partial=true;product=motility associated factor glycosyltransferase family protein;protein_id=HIH2232485.1;start_range=.,1;transl_table=11 ##sequence-region DBLQKW010000136.1 1 58275 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000136.1 tpg region 1 58275 . + . ID=DBLQKW010000136.1:1..58275;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000136.1 tpg gene 1 650 . - . ID=gene-ACYKK2_001902;Name=ACYKK2_001902;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001902;partial=true;start_range=.,1 DBLQKW010000136.1 Protein Homology CDS 1 650 . - 0 ID=cds-HIH2232486.1;Parent=gene-ACYKK2_001902;Dbxref=NCBI_GP:HIH2232486.1;Name=HIH2232486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002867793.1;locus_tag=ACYKK2_001902;partial=true;product=hypothetical protein;protein_id=HIH2232486.1;start_range=.,1;transl_table=11 DBLQKW010000136.1 tpg gene 858 2579 . - . ID=gene-ACYKK2_001903;Name=ACYKK2_001903;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001903 DBLQKW010000136.1 Protein Homology CDS 858 2579 . - 0 ID=cds-HIH2232487.1;Parent=gene-ACYKK2_001903;Dbxref=NCBI_GP:HIH2232487.1;Name=HIH2232487.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343852.1;locus_tag=ACYKK2_001903;product=GMC family oxidoreductase;protein_id=HIH2232487.1;transl_table=11 DBLQKW010000136.1 tpg gene 2581 3309 . - . ID=gene-ACYKK2_001904;Name=ACYKK2_001904;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001904 DBLQKW010000136.1 Protein Homology CDS 2581 3309 . - 0 ID=cds-HIH2232488.1;Parent=gene-ACYKK2_001904;Dbxref=NCBI_GP:HIH2232488.1;Name=HIH2232488.1;Ontology_term=GO:0008873,GO:0008875;gbkey=CDS;go_function=gluconate 2-dehydrogenase activity|0008873||IEA,gluconate dehydrogenase activity|0008875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343851.1;locus_tag=ACYKK2_001904;product=gluconate 2-dehydrogenase subunit 3 family protein;protein_id=HIH2232488.1;transl_table=11 DBLQKW010000136.1 tpg gene 3445 4149 . - . ID=gene-ACYKK2_001905;Name=ACYKK2_001905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001905 DBLQKW010000136.1 Protein Homology CDS 3445 4149 . - 0 ID=cds-HIH2232489.1;Parent=gene-ACYKK2_001905;Dbxref=NCBI_GP:HIH2232489.1;Name=HIH2232489.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343850.1;locus_tag=ACYKK2_001905;product=tetratricopeptide repeat protein;protein_id=HIH2232489.1;transl_table=11 DBLQKW010000136.1 tpg gene 4149 5978 . - . ID=gene-ACYKK2_001906;Name=ACYKK2_001906;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001906 DBLQKW010000136.1 Protein Homology CDS 4149 5978 . - 0 ID=cds-HIH2232490.1;Parent=gene-ACYKK2_001906;Dbxref=NCBI_GP:HIH2232490.1;Name=HIH2232490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343849.1;locus_tag=ACYKK2_001906;product=dynamin family protein;protein_id=HIH2232490.1;transl_table=11 DBLQKW010000136.1 tpg gene 5968 8154 . - . ID=gene-ACYKK2_001907;Name=ACYKK2_001907;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001907 DBLQKW010000136.1 Protein Homology CDS 5968 8154 . - 0 ID=cds-HIH2232491.1;Parent=gene-ACYKK2_001907;Dbxref=NCBI_GP:HIH2232491.1;Name=HIH2232491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343848.1;locus_tag=ACYKK2_001907;product=dynamin family protein;protein_id=HIH2232491.1;transl_table=11 DBLQKW010000136.1 tpg gene 8182 8907 . - . ID=gene-ACYKK2_001908;Name=ACYKK2_001908;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001908 DBLQKW010000136.1 Protein Homology CDS 8182 8907 . - 0 ID=cds-HIH2232492.1;Parent=gene-ACYKK2_001908;Dbxref=NCBI_GP:HIH2232492.1;Name=HIH2232492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343847.1;locus_tag=ACYKK2_001908;product=fumarate reductase iron-sulfur subunit;protein_id=HIH2232492.1;transl_table=11 DBLQKW010000136.1 tpg gene 8900 10891 . - . ID=gene-ACYKK2_001909;Name=ACYKK2_001909;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001909 DBLQKW010000136.1 Protein Homology CDS 8900 10891 . - 0 ID=cds-HIH2232493.1;Parent=gene-ACYKK2_001909;Dbxref=NCBI_GP:HIH2232493.1;Name=HIH2232493.1;Ontology_term=GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343846.1;locus_tag=ACYKK2_001909;product=fumarate reductase flavoprotein subunit;protein_id=HIH2232493.1;transl_table=11 DBLQKW010000136.1 tpg gene 10875 11657 . - . ID=gene-ACYKK2_001910;Name=ACYKK2_001910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001910 DBLQKW010000136.1 Protein Homology CDS 10875 11657 . - 0 ID=cds-HIH2232494.1;Parent=gene-ACYKK2_001910;Dbxref=NCBI_GP:HIH2232494.1;Name=HIH2232494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343845.1;locus_tag=ACYKK2_001910;product=fumarate reductase cytochrome b subunit;protein_id=HIH2232494.1;transl_table=11 DBLQKW010000136.1 tpg gene 11727 12542 . - . ID=gene-ACYKK2_001911;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=ACYKK2_001911 DBLQKW010000136.1 Protein Homology CDS 11727 12542 . - 0 ID=cds-HIH2232495.1;Parent=gene-ACYKK2_001911;Dbxref=NCBI_GP:HIH2232495.1;Name=HIH2232495.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343844.1;locus_tag=ACYKK2_001911;product=prolipoprotein diacylglyceryl transferase;protein_id=HIH2232495.1;transl_table=11 DBLQKW010000136.1 tpg gene 12632 13531 . + . ID=gene-ACYKK2_001912;Name=ACYKK2_001912;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001912 DBLQKW010000136.1 Protein Homology CDS 12632 13531 . + 0 ID=cds-HIH2232496.1;Parent=gene-ACYKK2_001912;Dbxref=NCBI_GP:HIH2232496.1;Name=HIH2232496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343843.1;locus_tag=ACYKK2_001912;product=membrane lipoprotein lipid attachment site-containing protein;protein_id=HIH2232496.1;transl_table=11 DBLQKW010000136.1 tpg gene 13606 14394 . - . ID=gene-ACYKK2_001913;Name=ACYKK2_001913;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001913 DBLQKW010000136.1 Protein Homology CDS 13606 14394 . - 0 ID=cds-HIH2232497.1;Parent=gene-ACYKK2_001913;Dbxref=NCBI_GP:HIH2232497.1;Name=HIH2232497.1;Ontology_term=GO:0019632,GO:0004764,GO:0050661;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA,NADP binding|0050661||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343842.1;locus_tag=ACYKK2_001913;product=shikimate dehydrogenase;protein_id=HIH2232497.1;transl_table=11 DBLQKW010000136.1 tpg gene 14391 15227 . - . ID=gene-ACYKK2_001914;Name=ACYKK2_001914;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001914 DBLQKW010000136.1 Protein Homology CDS 14391 15227 . - 0 ID=cds-HIH2232498.1;Parent=gene-ACYKK2_001914;Dbxref=NCBI_GP:HIH2232498.1;Name=HIH2232498.1;Ontology_term=GO:0042834,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343841.1;locus_tag=ACYKK2_001914;product=SPOR domain-containing protein;protein_id=HIH2232498.1;transl_table=11 DBLQKW010000136.1 tpg gene 15241 15786 . - . ID=gene-ACYKK2_001915;Name=ACYKK2_001915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001915 DBLQKW010000136.1 Protein Homology CDS 15241 15786 . - 0 ID=cds-HIH2232499.1;Parent=gene-ACYKK2_001915;Dbxref=NCBI_GP:HIH2232499.1;Name=HIH2232499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343840.1;locus_tag=ACYKK2_001915;product=DUF1882 domain-containing protein;protein_id=HIH2232499.1;transl_table=11 DBLQKW010000136.1 tpg gene 15783 17027 . - . ID=gene-ACYKK2_001916;Name=ACYKK2_001916;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001916 DBLQKW010000136.1 Protein Homology CDS 15783 17027 . - 0 ID=cds-HIH2232500.1;Parent=gene-ACYKK2_001916;Dbxref=NCBI_GP:HIH2232500.1;Name=HIH2232500.1;Ontology_term=GO:0019264,GO:0004372,GO:0030170;gbkey=CDS;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343839.1;locus_tag=ACYKK2_001916;product=serine hydroxymethyltransferase;protein_id=HIH2232500.1;transl_table=11 DBLQKW010000136.1 tpg gene 17024 18529 . - . ID=gene-ACYKK2_001917;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=ACYKK2_001917 DBLQKW010000136.1 Protein Homology CDS 17024 18529 . - 0 ID=cds-HIH2232501.1;Parent=gene-ACYKK2_001917;Dbxref=NCBI_GP:HIH2232501.1;Name=HIH2232501.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343838.1;locus_tag=ACYKK2_001917;product=lysine--tRNA ligase;protein_id=HIH2232501.1;transl_table=11 DBLQKW010000136.1 tpg gene 18530 19003 . - . ID=gene-ACYKK2_001918;Name=ACYKK2_001918;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001918 DBLQKW010000136.1 Protein Homology CDS 18530 19003 . - 0 ID=cds-HIH2232502.1;Parent=gene-ACYKK2_001918;Dbxref=NCBI_GP:HIH2232502.1;Name=HIH2232502.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343837.1;locus_tag=ACYKK2_001918;product=Fur family transcriptional regulator;protein_id=HIH2232502.1;transl_table=11 DBLQKW010000136.1 tpg gene 19005 19568 . - . ID=gene-ACYKK2_001919;Name=ACYKK2_001919;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001919 DBLQKW010000136.1 Protein Homology CDS 19005 19568 . - 0 ID=cds-HIH2232503.1;Parent=gene-ACYKK2_001919;Dbxref=NCBI_GP:HIH2232503.1;Name=HIH2232503.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343836.1;locus_tag=ACYKK2_001919;product=CvpA family protein;protein_id=HIH2232503.1;transl_table=11 DBLQKW010000136.1 tpg gene 19636 19920 . - . ID=gene-ACYKK2_001920;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=ACYKK2_001920 DBLQKW010000136.1 Protein Homology CDS 19636 19920 . - 0 ID=cds-HIH2232504.1;Parent=gene-ACYKK2_001920;Dbxref=NCBI_GP:HIH2232504.1;Name=HIH2232504.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343835.1;locus_tag=ACYKK2_001920;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=HIH2232504.1;transl_table=11 DBLQKW010000136.1 tpg gene 20064 20642 . + . ID=gene-ACYKK2_001921;Name=ACYKK2_001921;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001921 DBLQKW010000136.1 Protein Homology CDS 20064 20642 . + 0 ID=cds-HIH2232505.1;Parent=gene-ACYKK2_001921;Dbxref=NCBI_GP:HIH2232505.1;Name=HIH2232505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343834.1;locus_tag=ACYKK2_001921;product=hypothetical protein;protein_id=HIH2232505.1;transl_table=11 DBLQKW010000136.1 tpg gene 20639 21637 . + . ID=gene-ACYKK2_001922;Name=ACYKK2_001922;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001922 DBLQKW010000136.1 Protein Homology CDS 20639 21637 . + 0 ID=cds-HIH2232506.1;Parent=gene-ACYKK2_001922;Dbxref=NCBI_GP:HIH2232506.1;Name=HIH2232506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343833.1;locus_tag=ACYKK2_001922;product=hypothetical protein;protein_id=HIH2232506.1;transl_table=11 DBLQKW010000136.1 tpg gene 21634 21924 . + . ID=gene-ACYKK2_001923;Name=ACYKK2_001923;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001923 DBLQKW010000136.1 Protein Homology CDS 21634 21924 . + 0 ID=cds-HIH2232507.1;Parent=gene-ACYKK2_001923;Dbxref=NCBI_GP:HIH2232507.1;Name=HIH2232507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343832.1;locus_tag=ACYKK2_001923;product=tram-like protein;protein_id=HIH2232507.1;transl_table=11 DBLQKW010000136.1 tpg gene 21911 22540 . + . ID=gene-ACYKK2_001924;Name=ACYKK2_001924;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001924 DBLQKW010000136.1 Protein Homology CDS 21911 22540 . + 0 ID=cds-HIH2232508.1;Parent=gene-ACYKK2_001924;Dbxref=NCBI_GP:HIH2232508.1;Name=HIH2232508.1;Ontology_term=GO:0004594;gbkey=CDS;go_function=pantothenate kinase activity|0004594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343831.1;locus_tag=ACYKK2_001924;product=type III pantothenate kinase;protein_id=HIH2232508.1;transl_table=11 DBLQKW010000136.1 tpg gene 22658 24004 . + . ID=gene-ACYKK2_001925;Name=ACYKK2_001925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001925 DBLQKW010000136.1 Protein Homology CDS 22658 24004 . + 0 ID=cds-HIH2232509.1;Parent=gene-ACYKK2_001925;Dbxref=NCBI_GP:HIH2232509.1;Name=HIH2232509.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343830.1;locus_tag=ACYKK2_001925;product=FAD-dependent oxidoreductase;protein_id=HIH2232509.1;transl_table=11 DBLQKW010000136.1 tpg gene 24053 25495 . + . ID=gene-ACYKK2_001926;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=ACYKK2_001926 DBLQKW010000136.1 Protein Homology CDS 24053 25495 . + 0 ID=cds-HIH2232510.1;Parent=gene-ACYKK2_001926;Dbxref=NCBI_GP:HIH2232510.1;Name=HIH2232510.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343829.1;locus_tag=ACYKK2_001926;product=pyruvate kinase;protein_id=HIH2232510.1;transl_table=11 DBLQKW010000136.1 tpg gene 25593 26228 . + . ID=gene-ACYKK2_001927;Name=ACYKK2_001927;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001927 DBLQKW010000136.1 Protein Homology CDS 25593 26228 . + 0 ID=cds-HIH2232511.1;Parent=gene-ACYKK2_001927;Dbxref=NCBI_GP:HIH2232511.1;Name=HIH2232511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343828.1;locus_tag=ACYKK2_001927;product=hypothetical protein;protein_id=HIH2232511.1;transl_table=11 DBLQKW010000136.1 tpg gene 26259 28721 . - . ID=gene-ACYKK2_001928;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=ACYKK2_001928 DBLQKW010000136.1 Protein Homology CDS 26259 28721 . - 0 ID=cds-HIH2232512.1;Parent=gene-ACYKK2_001928;Dbxref=NCBI_GP:HIH2232512.1;Name=HIH2232512.1;gbkey=CDS;gene=pflB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343827.1;locus_tag=ACYKK2_001928;product=motility protein PflB;protein_id=HIH2232512.1;transl_table=11 DBLQKW010000136.1 tpg gene 28731 29966 . - . ID=gene-ACYKK2_001929;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=ACYKK2_001929 DBLQKW010000136.1 Protein Homology CDS 28731 29966 . - 0 ID=cds-HIH2232513.1;Parent=gene-ACYKK2_001929;Dbxref=NCBI_GP:HIH2232513.1;Name=HIH2232513.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343826.1;locus_tag=ACYKK2_001929;product=serine--tRNA ligase;protein_id=HIH2232513.1;transl_table=11 DBLQKW010000136.1 tpg gene 29977 30936 . - . ID=gene-ACYKK2_001930;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=ACYKK2_001930 DBLQKW010000136.1 Protein Homology CDS 29977 30936 . - 0 ID=cds-HIH2232514.1;Parent=gene-ACYKK2_001930;Dbxref=NCBI_GP:HIH2232514.1;Name=HIH2232514.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343825.1;locus_tag=ACYKK2_001930;product=tryptophan--tRNA ligase;protein_id=HIH2232514.1;transl_table=11 DBLQKW010000136.1 tpg gene 30933 31430 . - . ID=gene-ACYKK2_001931;Name=ACYKK2_001931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001931 DBLQKW010000136.1 Protein Homology CDS 30933 31430 . - 0 ID=cds-HIH2232515.1;Parent=gene-ACYKK2_001931;Dbxref=NCBI_GP:HIH2232515.1;Name=HIH2232515.1;Ontology_term=GO:0008652,GO:0009073,GO:0000287,GO:0004765,GO:0005524;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,shikimate kinase activity|0004765||IEA,ATP binding|0005524||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343824.1;locus_tag=ACYKK2_001931;product=shikimate kinase;protein_id=HIH2232515.1;transl_table=11 DBLQKW010000136.1 tpg gene 31417 32799 . - . ID=gene-ACYKK2_001932;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=ACYKK2_001932 DBLQKW010000136.1 Protein Homology CDS 31417 32799 . - 0 ID=cds-HIH2232516.1;Parent=gene-ACYKK2_001932;Dbxref=NCBI_GP:HIH2232516.1;Name=HIH2232516.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343823.1;locus_tag=ACYKK2_001932;product=ribosome biogenesis GTPase Der;protein_id=HIH2232516.1;transl_table=11 DBLQKW010000136.1 tpg gene 32900 33832 . + . ID=gene-ACYKK2_001933;Name=ACYKK2_001933;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001933 DBLQKW010000136.1 Protein Homology CDS 32900 33832 . + 0 ID=cds-HIH2232517.1;Parent=gene-ACYKK2_001933;Dbxref=NCBI_GP:HIH2232517.1;Name=HIH2232517.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343822.1;locus_tag=ACYKK2_001933;product=DMT family transporter;protein_id=HIH2232517.1;transl_table=11 DBLQKW010000136.1 tpg gene 33829 34644 . + . ID=gene-ACYKK2_001934;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=ACYKK2_001934 DBLQKW010000136.1 Protein Homology CDS 33829 34644 . + 0 ID=cds-HIH2232518.1;Parent=gene-ACYKK2_001934;Dbxref=NCBI_GP:HIH2232518.1;Name=HIH2232518.1;Ontology_term=GO:0009058,GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002862627.1;locus_tag=ACYKK2_001934;product=3-deoxy-8-phosphooctulonate synthase;protein_id=HIH2232518.1;transl_table=11 DBLQKW010000136.1 tpg gene 34641 35105 . + . ID=gene-ACYKK2_001935;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=ACYKK2_001935 DBLQKW010000136.1 Protein Homology CDS 34641 35105 . + 0 ID=cds-HIH2232519.1;Parent=gene-ACYKK2_001935;Dbxref=NCBI_GP:HIH2232519.1;Name=HIH2232519.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343820.1;locus_tag=ACYKK2_001935;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=HIH2232519.1;transl_table=11 DBLQKW010000136.1 tpg gene 35105 35503 . + . ID=gene-ACYKK2_001936;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=ACYKK2_001936 DBLQKW010000136.1 Protein Homology CDS 35105 35503 . + 0 ID=cds-HIH2232520.1;Parent=gene-ACYKK2_001936;Dbxref=NCBI_GP:HIH2232520.1;Name=HIH2232520.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343819.1;locus_tag=ACYKK2_001936;product=transcription antitermination factor NusB;protein_id=HIH2232520.1;transl_table=11 DBLQKW010000136.1 tpg gene 35500 36339 . + . ID=gene-ACYKK2_001937;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=ACYKK2_001937 DBLQKW010000136.1 Protein Homology CDS 35500 36339 . + 0 ID=cds-HIH2232521.1;Parent=gene-ACYKK2_001937;Dbxref=NCBI_GP:HIH2232521.1;Name=HIH2232521.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343818.1;locus_tag=ACYKK2_001937;product=orotidine-5'-phosphate decarboxylase;protein_id=HIH2232521.1;transl_table=11 DBLQKW010000136.1 tpg gene 36336 37121 . + . ID=gene-ACYKK2_001938;Name=ACYKK2_001938;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001938 DBLQKW010000136.1 Protein Homology CDS 36336 37121 . + 0 ID=cds-HIH2232522.1;Parent=gene-ACYKK2_001938;Dbxref=NCBI_GP:HIH2232522.1;Name=HIH2232522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343817.1;locus_tag=ACYKK2_001938;product=hypothetical protein;protein_id=HIH2232522.1;transl_table=11 DBLQKW010000136.1 tpg gene 37177 38070 . + . ID=gene-ACYKK2_001939;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=ACYKK2_001939 DBLQKW010000136.1 Protein Homology CDS 37177 38070 . + 0 ID=cds-HIH2232523.1;Parent=gene-ACYKK2_001939;Dbxref=NCBI_GP:HIH2232523.1;Name=HIH2232523.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343816.1;locus_tag=ACYKK2_001939;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=HIH2232523.1;transl_table=11 DBLQKW010000136.1 tpg gene 38070 38642 . + . ID=gene-ACYKK2_001940;Name=ACYKK2_001940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001940 DBLQKW010000136.1 Protein Homology CDS 38070 38642 . + 0 ID=cds-HIH2232524.1;Parent=gene-ACYKK2_001940;Dbxref=NCBI_GP:HIH2232524.1;Name=HIH2232524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002857273.1;locus_tag=ACYKK2_001940;product=ferric reductase-like transmembrane domain-containing protein;protein_id=HIH2232524.1;transl_table=11 DBLQKW010000136.1 tpg gene 38607 40319 . - . ID=gene-ACYKK2_001941;Name=ACYKK2_001941;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001941 DBLQKW010000136.1 Protein Homology CDS 38607 40319 . - 0 ID=cds-HIH2232525.1;Parent=gene-ACYKK2_001941;Dbxref=NCBI_GP:HIH2232525.1;Name=HIH2232525.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343814.1;locus_tag=ACYKK2_001941;product=AAA family ATPase;protein_id=HIH2232525.1;transl_table=11 DBLQKW010000136.1 tpg gene 40319 41143 . - . ID=gene-ACYKK2_001942;Name=ACYKK2_001942;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001942 DBLQKW010000136.1 Protein Homology CDS 40319 41143 . - 0 ID=cds-HIH2232526.1;Parent=gene-ACYKK2_001942;Dbxref=NCBI_GP:HIH2232526.1;Name=HIH2232526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343813.1;locus_tag=ACYKK2_001942;product=hypothetical protein;protein_id=HIH2232526.1;transl_table=11 DBLQKW010000136.1 tpg gene 41154 41630 . - . ID=gene-ACYKK2_001943;Name=ACYKK2_001943;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001943 DBLQKW010000136.1 Protein Homology CDS 41154 41630 . - 0 ID=cds-HIH2232527.1;Parent=gene-ACYKK2_001943;Dbxref=NCBI_GP:HIH2232527.1;Name=HIH2232527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343812.1;locus_tag=ACYKK2_001943;product=hypothetical protein;protein_id=HIH2232527.1;transl_table=11 DBLQKW010000136.1 tpg gene 41639 42130 . - . ID=gene-ACYKK2_001944;Name=ACYKK2_001944;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001944 DBLQKW010000136.1 Protein Homology CDS 41639 42130 . - 0 ID=cds-HIH2232528.1;Parent=gene-ACYKK2_001944;Dbxref=NCBI_GP:HIH2232528.1;Name=HIH2232528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343811.1;locus_tag=ACYKK2_001944;product=YajQ family cyclic di-GMP-binding protein;protein_id=HIH2232528.1;transl_table=11 DBLQKW010000136.1 tpg gene 42120 43055 . - . ID=gene-ACYKK2_001945;Name=ACYKK2_001945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001945 DBLQKW010000136.1 Protein Homology CDS 42120 43055 . - 0 ID=cds-HIH2232529.1;Parent=gene-ACYKK2_001945;Dbxref=NCBI_GP:HIH2232529.1;Name=HIH2232529.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343810.1;locus_tag=ACYKK2_001945;product=D-2-hydroxyacid dehydrogenase;protein_id=HIH2232529.1;transl_table=11 DBLQKW010000136.1 tpg gene 43059 44228 . - . ID=gene-ACYKK2_001946;Name=ACYKK2_001946;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001946 DBLQKW010000136.1 Protein Homology CDS 43059 44228 . - 0 ID=cds-HIH2232530.1;Parent=gene-ACYKK2_001946;Dbxref=NCBI_GP:HIH2232530.1;Name=HIH2232530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343809.1;locus_tag=ACYKK2_001946;product=glutathionylspermidine synthase family protein;protein_id=HIH2232530.1;transl_table=11 DBLQKW010000136.1 tpg gene 44238 44843 . - . ID=gene-ACYKK2_001947;Name=ACYKK2_001947;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001947 DBLQKW010000136.1 Protein Homology CDS 44238 44843 . - 0 ID=cds-HIH2232531.1;Parent=gene-ACYKK2_001947;Dbxref=NCBI_GP:HIH2232531.1;Name=HIH2232531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343808.1;locus_tag=ACYKK2_001947;product=UPF0323 family lipoprotein;protein_id=HIH2232531.1;transl_table=11 DBLQKW010000136.1 tpg gene 44963 45175 . - . ID=gene-ACYKK2_001948;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=ACYKK2_001948 DBLQKW010000136.1 Protein Homology CDS 44963 45175 . - 0 ID=cds-HIH2232532.1;Parent=gene-ACYKK2_001948;Dbxref=NCBI_GP:HIH2232532.1;Name=HIH2232532.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343807.1;locus_tag=ACYKK2_001948;product=30S ribosomal protein S21;protein_id=HIH2232532.1;transl_table=11 DBLQKW010000136.1 tpg gene 45336 46712 . + . ID=gene-ACYKK2_001949;Name=ccoG;gbkey=Gene;gene=ccoG;gene_biotype=protein_coding;locus_tag=ACYKK2_001949 DBLQKW010000136.1 Protein Homology CDS 45336 46712 . + 0 ID=cds-HIH2232533.1;Parent=gene-ACYKK2_001949;Dbxref=NCBI_GP:HIH2232533.1;Name=HIH2232533.1;Ontology_term=GO:0008535,GO:0016020;gbkey=CDS;gene=ccoG;go_component=membrane|0016020||IEA;go_process=respiratory chain complex IV assembly|0008535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343806.1;locus_tag=ACYKK2_001949;product=cytochrome c oxidase accessory protein CcoG;protein_id=HIH2232533.1;transl_table=11 DBLQKW010000136.1 tpg gene 46699 47331 . + . ID=gene-ACYKK2_001950;Name=cmeR;gbkey=Gene;gene=cmeR;gene_biotype=protein_coding;locus_tag=ACYKK2_001950 DBLQKW010000136.1 Protein Homology CDS 46699 47331 . + 0 ID=cds-HIH2232534.1;Parent=gene-ACYKK2_001950;Dbxref=NCBI_GP:HIH2232534.1;Name=HIH2232534.1;gbkey=CDS;gene=cmeR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343805.1;locus_tag=ACYKK2_001950;product=multidrug efflux system transcriptional regulator CmeR;protein_id=HIH2232534.1;transl_table=11 DBLQKW010000136.1 tpg gene 47426 48529 . + . ID=gene-ACYKK2_001951;Name=cmeA;gbkey=Gene;gene=cmeA;gene_biotype=protein_coding;locus_tag=ACYKK2_001951 DBLQKW010000136.1 Protein Homology CDS 47426 48529 . + 0 ID=cds-HIH2232535.1;Parent=gene-ACYKK2_001951;Dbxref=NCBI_GP:HIH2232535.1;Name=HIH2232535.1;gbkey=CDS;gene=cmeA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343804.1;locus_tag=ACYKK2_001951;product=multidrug efflux RND transporter periplasmic adaptor subunit CmeA;protein_id=HIH2232535.1;transl_table=11 DBLQKW010000136.1 tpg gene 48529 51651 . + . ID=gene-ACYKK2_001952;Name=cmeB;gbkey=Gene;gene=cmeB;gene_biotype=protein_coding;locus_tag=ACYKK2_001952 DBLQKW010000136.1 Protein Homology CDS 48529 51651 . + 0 ID=cds-HIH2232536.1;Parent=gene-ACYKK2_001952;Dbxref=NCBI_GP:HIH2232536.1;Name=HIH2232536.1;gbkey=CDS;gene=cmeB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343803.1;locus_tag=ACYKK2_001952;product=multidrug efflux RND transporter permease subunit CmeB;protein_id=HIH2232536.1;transl_table=11 DBLQKW010000136.1 tpg gene 51644 53122 . + . ID=gene-ACYKK2_001953;Name=cmeC;gbkey=Gene;gene=cmeC;gene_biotype=protein_coding;locus_tag=ACYKK2_001953 DBLQKW010000136.1 Protein Homology CDS 51644 53122 . + 0 ID=cds-HIH2232537.1;Parent=gene-ACYKK2_001953;Dbxref=NCBI_GP:HIH2232537.1;Name=HIH2232537.1;gbkey=CDS;gene=cmeC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343802.1;locus_tag=ACYKK2_001953;product=multidrug efflux transporter outer membrane subunit CmeC;protein_id=HIH2232537.1;transl_table=11 DBLQKW010000136.1 tpg gene 53145 53396 . - . ID=gene-ACYKK2_001954;Name=cmeU;gbkey=Gene;gene=cmeU;gene_biotype=protein_coding;locus_tag=ACYKK2_001954 DBLQKW010000136.1 Protein Homology CDS 53145 53396 . - 0 ID=cds-HIH2232538.1;Parent=gene-ACYKK2_001954;Dbxref=NCBI_GP:HIH2232538.1;Name=HIH2232538.1;gbkey=CDS;gene=cmeU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343801.1;locus_tag=ACYKK2_001954;product=CmeU family protein;protein_id=HIH2232538.1;transl_table=11 DBLQKW010000136.1 tpg gene 53524 54870 . + . ID=gene-ACYKK2_001955;Name=ACYKK2_001955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001955 DBLQKW010000136.1 Protein Homology CDS 53524 54870 . + 0 ID=cds-HIH2232539.1;Parent=gene-ACYKK2_001955;Dbxref=NCBI_GP:HIH2232539.1;Name=HIH2232539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343800.1;locus_tag=ACYKK2_001955;product=coproporphyrinogen III oxidase family protein;protein_id=HIH2232539.1;transl_table=11 DBLQKW010000136.1 tpg gene 54867 55319 . - . ID=gene-ACYKK2_001956;Name=hemJ;gbkey=Gene;gene=hemJ;gene_biotype=protein_coding;locus_tag=ACYKK2_001956 DBLQKW010000136.1 Protein Homology CDS 54867 55319 . - 0 ID=cds-HIH2232540.1;Parent=gene-ACYKK2_001956;Dbxref=NCBI_GP:HIH2232540.1;Name=HIH2232540.1;gbkey=CDS;gene=hemJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343799.1;locus_tag=ACYKK2_001956;product=protoporphyrinogen oxidase HemJ;protein_id=HIH2232540.1;transl_table=11 DBLQKW010000136.1 tpg gene 55303 55773 . - . ID=gene-ACYKK2_001957;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=ACYKK2_001957 DBLQKW010000136.1 Protein Homology CDS 55303 55773 . - 0 ID=cds-HIH2232541.1;Parent=gene-ACYKK2_001957;Dbxref=NCBI_GP:HIH2232541.1;Name=HIH2232541.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343798.1;locus_tag=ACYKK2_001957;product=signal peptidase II;protein_id=HIH2232541.1;transl_table=11 DBLQKW010000136.1 tpg gene 55766 57103 . - . ID=gene-ACYKK2_001958;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=ACYKK2_001958 DBLQKW010000136.1 Protein Homology CDS 55766 57103 . - 0 ID=cds-HIH2232542.1;Parent=gene-ACYKK2_001958;Dbxref=NCBI_GP:HIH2232542.1;Name=HIH2232542.1;Ontology_term=GO:0005975,GO:0009252,GO:0000287,GO:0008966;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA;go_process=carbohydrate metabolic process|0005975||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343797.1;locus_tag=ACYKK2_001958;product=phosphoglucosamine mutase;protein_id=HIH2232542.1;transl_table=11 DBLQKW010000136.1 tpg gene 57197 58222 . - . ID=gene-ACYKK2_001959;Name=ACYKK2_001959;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001959 DBLQKW010000136.1 Protein Homology CDS 57197 58222 . - 0 ID=cds-HIH2232543.1;Parent=gene-ACYKK2_001959;Dbxref=NCBI_GP:HIH2232543.1;Name=HIH2232543.1;Ontology_term=GO:0004130,GO:0016491,GO:0020037;gbkey=CDS;go_function=cytochrome-c peroxidase activity|0004130||IEA,oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343796.1;locus_tag=ACYKK2_001959;product=cytochrome-c peroxidase;protein_id=HIH2232543.1;transl_table=11 ##sequence-region DBLQKW010000137.1 1 2149 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000137.1 tpg region 1 2149 . + . ID=DBLQKW010000137.1:1..2149;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000137.1 tpg gene 51 1970 . + . ID=gene-ACYKK2_001960;Name=tet(O);gbkey=Gene;gene=tet(O);gene_biotype=protein_coding;locus_tag=ACYKK2_001960 DBLQKW010000137.1 Protein Homology CDS 51 1970 . + 0 ID=cds-HIH2232544.1;Parent=gene-ACYKK2_001960;Dbxref=NCBI_GP:HIH2232544.1;Name=HIH2232544.1;gbkey=CDS;gene=tet(O);inference=COORDINATES: similar to AA sequence:RefSeq:WP_032490535.1;locus_tag=ACYKK2_001960;product=tetracycline resistance ribosomal protection protein Tet(O);protein_id=HIH2232544.1;transl_table=11 DBLQKW010000137.1 tpg gene 2025 2149 . + . ID=gene-ACYKK2_001961;Name=ACYKK2_001961;end_range=2149,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001961;partial=true DBLQKW010000137.1 Protein Homology CDS 2025 2149 . + 0 ID=cds-HIH2232545.1;Parent=gene-ACYKK2_001961;Dbxref=NCBI_GP:HIH2232545.1;Name=HIH2232545.1;end_range=2149,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025568.6;locus_tag=ACYKK2_001961;partial=true;product=cysteine-rich KTR domain-containing protein;protein_id=HIH2232545.1;transl_table=11 ##sequence-region DBLQKW010000138.1 1 2149 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000138.1 tpg region 1 2149 . + . ID=DBLQKW010000138.1:1..2149;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000138.1 tpg gene 51 1970 . + . ID=gene-ACYKK2_001962;Name=tet(O);gbkey=Gene;gene=tet(O);gene_biotype=protein_coding;locus_tag=ACYKK2_001962 DBLQKW010000138.1 Protein Homology CDS 51 1970 . + 0 ID=cds-HIH2232546.1;Parent=gene-ACYKK2_001962;Dbxref=NCBI_GP:HIH2232546.1;Name=HIH2232546.1;gbkey=CDS;gene=tet(O);inference=COORDINATES: similar to AA sequence:RefSeq:WP_032490535.1;locus_tag=ACYKK2_001962;product=tetracycline resistance ribosomal protection protein Tet(O);protein_id=HIH2232546.1;transl_table=11 DBLQKW010000138.1 tpg gene 2025 2149 . + . ID=gene-ACYKK2_001963;Name=ACYKK2_001963;end_range=2149,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001963;partial=true DBLQKW010000138.1 Protein Homology CDS 2025 2149 . + 0 ID=cds-HIH2232547.1;Parent=gene-ACYKK2_001963;Dbxref=NCBI_GP:HIH2232547.1;Name=HIH2232547.1;end_range=2149,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025568.6;locus_tag=ACYKK2_001963;partial=true;product=cysteine-rich KTR domain-containing protein;protein_id=HIH2232547.1;transl_table=11 ##sequence-region DBLQKW010000139.1 1 2149 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000139.1 tpg region 1 2149 . + . ID=DBLQKW010000139.1:1..2149;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000139.1 tpg gene 51 1970 . + . ID=gene-ACYKK2_001964;Name=tet(O);gbkey=Gene;gene=tet(O);gene_biotype=protein_coding;locus_tag=ACYKK2_001964 DBLQKW010000139.1 Protein Homology CDS 51 1970 . + 0 ID=cds-HIH2232548.1;Parent=gene-ACYKK2_001964;Dbxref=NCBI_GP:HIH2232548.1;Name=HIH2232548.1;gbkey=CDS;gene=tet(O);inference=COORDINATES: similar to AA sequence:RefSeq:WP_032490535.1;locus_tag=ACYKK2_001964;product=tetracycline resistance ribosomal protection protein Tet(O);protein_id=HIH2232548.1;transl_table=11 DBLQKW010000139.1 tpg gene 2025 2149 . + . ID=gene-ACYKK2_001965;Name=ACYKK2_001965;end_range=2149,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001965;partial=true DBLQKW010000139.1 Protein Homology CDS 2025 2149 . + 0 ID=cds-HIH2232549.1;Parent=gene-ACYKK2_001965;Dbxref=NCBI_GP:HIH2232549.1;Name=HIH2232549.1;end_range=2149,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025568.6;locus_tag=ACYKK2_001965;partial=true;product=cysteine-rich KTR domain-containing protein;protein_id=HIH2232549.1;transl_table=11 ##sequence-region DBLQKW010000140.1 1 2149 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000140.1 tpg region 1 2149 . + . ID=DBLQKW010000140.1:1..2149;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000140.1 tpg gene 51 1970 . + . ID=gene-ACYKK2_001966;Name=tet(O);gbkey=Gene;gene=tet(O);gene_biotype=protein_coding;locus_tag=ACYKK2_001966 DBLQKW010000140.1 Protein Homology CDS 51 1970 . + 0 ID=cds-HIH2232550.1;Parent=gene-ACYKK2_001966;Dbxref=NCBI_GP:HIH2232550.1;Name=HIH2232550.1;gbkey=CDS;gene=tet(O);inference=COORDINATES: similar to AA sequence:RefSeq:WP_032490535.1;locus_tag=ACYKK2_001966;product=tetracycline resistance ribosomal protection protein Tet(O);protein_id=HIH2232550.1;transl_table=11 DBLQKW010000140.1 tpg gene 2025 2149 . + . ID=gene-ACYKK2_001967;Name=ACYKK2_001967;end_range=2149,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001967;partial=true DBLQKW010000140.1 Protein Homology CDS 2025 2149 . + 0 ID=cds-HIH2232551.1;Parent=gene-ACYKK2_001967;Dbxref=NCBI_GP:HIH2232551.1;Name=HIH2232551.1;end_range=2149,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025568.6;locus_tag=ACYKK2_001967;partial=true;product=cysteine-rich KTR domain-containing protein;protein_id=HIH2232551.1;transl_table=11 ##sequence-region DBLQKW010000141.1 1 2149 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000141.1 tpg region 1 2149 . + . ID=DBLQKW010000141.1:1..2149;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000141.1 tpg gene 51 1970 . + . ID=gene-ACYKK2_001968;Name=tet(O);gbkey=Gene;gene=tet(O);gene_biotype=protein_coding;locus_tag=ACYKK2_001968 DBLQKW010000141.1 Protein Homology CDS 51 1970 . + 0 ID=cds-HIH2232552.1;Parent=gene-ACYKK2_001968;Dbxref=NCBI_GP:HIH2232552.1;Name=HIH2232552.1;gbkey=CDS;gene=tet(O);inference=COORDINATES: similar to AA sequence:RefSeq:WP_032490535.1;locus_tag=ACYKK2_001968;product=tetracycline resistance ribosomal protection protein Tet(O);protein_id=HIH2232552.1;transl_table=11 DBLQKW010000141.1 tpg gene 2025 2149 . + . ID=gene-ACYKK2_001969;Name=ACYKK2_001969;end_range=2149,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001969;partial=true DBLQKW010000141.1 Protein Homology CDS 2025 2149 . + 0 ID=cds-HIH2232553.1;Parent=gene-ACYKK2_001969;Dbxref=NCBI_GP:HIH2232553.1;Name=HIH2232553.1;end_range=2149,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025568.6;locus_tag=ACYKK2_001969;partial=true;product=cysteine-rich KTR domain-containing protein;protein_id=HIH2232553.1;transl_table=11 ##sequence-region DBLQKW010000142.1 1 2149 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000142.1 tpg region 1 2149 . + . ID=DBLQKW010000142.1:1..2149;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000142.1 tpg gene 51 1970 . + . ID=gene-ACYKK2_001970;Name=tet(O);gbkey=Gene;gene=tet(O);gene_biotype=protein_coding;locus_tag=ACYKK2_001970 DBLQKW010000142.1 Protein Homology CDS 51 1970 . + 0 ID=cds-HIH2232554.1;Parent=gene-ACYKK2_001970;Dbxref=NCBI_GP:HIH2232554.1;Name=HIH2232554.1;gbkey=CDS;gene=tet(O);inference=COORDINATES: similar to AA sequence:RefSeq:WP_032490535.1;locus_tag=ACYKK2_001970;product=tetracycline resistance ribosomal protection protein Tet(O);protein_id=HIH2232554.1;transl_table=11 DBLQKW010000142.1 tpg gene 2025 2149 . + . ID=gene-ACYKK2_001971;Name=ACYKK2_001971;end_range=2149,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001971;partial=true DBLQKW010000142.1 Protein Homology CDS 2025 2149 . + 0 ID=cds-HIH2232555.1;Parent=gene-ACYKK2_001971;Dbxref=NCBI_GP:HIH2232555.1;Name=HIH2232555.1;end_range=2149,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025568.6;locus_tag=ACYKK2_001971;partial=true;product=cysteine-rich KTR domain-containing protein;protein_id=HIH2232555.1;transl_table=11 ##sequence-region DBLQKW010000143.1 1 2149 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000143.1 tpg region 1 2149 . + . ID=DBLQKW010000143.1:1..2149;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000143.1 tpg gene 51 1970 . + . ID=gene-ACYKK2_001972;Name=tet(O);gbkey=Gene;gene=tet(O);gene_biotype=protein_coding;locus_tag=ACYKK2_001972 DBLQKW010000143.1 Protein Homology CDS 51 1970 . + 0 ID=cds-HIH2232556.1;Parent=gene-ACYKK2_001972;Dbxref=NCBI_GP:HIH2232556.1;Name=HIH2232556.1;gbkey=CDS;gene=tet(O);inference=COORDINATES: similar to AA sequence:RefSeq:WP_032490535.1;locus_tag=ACYKK2_001972;product=tetracycline resistance ribosomal protection protein Tet(O);protein_id=HIH2232556.1;transl_table=11 DBLQKW010000143.1 tpg gene 2025 2149 . + . ID=gene-ACYKK2_001973;Name=ACYKK2_001973;end_range=2149,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001973;partial=true DBLQKW010000143.1 Protein Homology CDS 2025 2149 . + 0 ID=cds-HIH2232557.1;Parent=gene-ACYKK2_001973;Dbxref=NCBI_GP:HIH2232557.1;Name=HIH2232557.1;end_range=2149,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025568.6;locus_tag=ACYKK2_001973;partial=true;product=cysteine-rich KTR domain-containing protein;protein_id=HIH2232557.1;transl_table=11 ##sequence-region DBLQKW010000144.1 1 2149 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=197 DBLQKW010000144.1 tpg region 1 2149 . + . ID=DBLQKW010000144.1:1..2149;Dbxref=taxon:197;collection-date=2022;country=Uganda;gbkey=Src;isolate=22M0504;isolation-source=broiler;mol_type=genomic DNA;nat-host=Gallus gallus DBLQKW010000144.1 tpg gene 51 1970 . + . ID=gene-ACYKK2_001974;Name=tet(O);gbkey=Gene;gene=tet(O);gene_biotype=protein_coding;locus_tag=ACYKK2_001974 DBLQKW010000144.1 Protein Homology CDS 51 1970 . + 0 ID=cds-HIH2232558.1;Parent=gene-ACYKK2_001974;Dbxref=NCBI_GP:HIH2232558.1;Name=HIH2232558.1;gbkey=CDS;gene=tet(O);inference=COORDINATES: similar to AA sequence:RefSeq:WP_032490535.1;locus_tag=ACYKK2_001974;product=tetracycline resistance ribosomal protection protein Tet(O);protein_id=HIH2232558.1;transl_table=11 DBLQKW010000144.1 tpg gene 2025 2149 . + . ID=gene-ACYKK2_001975;Name=ACYKK2_001975;end_range=2149,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=ACYKK2_001975;partial=true DBLQKW010000144.1 Protein Homology CDS 2025 2149 . + 0 ID=cds-HIH2232559.1;Parent=gene-ACYKK2_001975;Dbxref=NCBI_GP:HIH2232559.1;Name=HIH2232559.1;end_range=2149,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025568.6;locus_tag=ACYKK2_001975;partial=true;product=cysteine-rich KTR domain-containing protein;protein_id=HIH2232559.1;transl_table=11 ###